Query 006884
Match_columns 627
No_of_seqs 547 out of 5164
Neff 9.3
Searched_HMMs 46136
Date Thu Mar 28 15:52:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006884.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006884hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 4.2E-60 9.2E-65 558.8 41.0 491 71-611 454-955 (968)
2 KOG1187 Serine/threonine prote 100.0 3E-53 6.6E-58 437.3 27.3 282 325-610 61-355 (361)
3 KOG0192 Tyrosine kinase specif 100.0 1.4E-46 3E-51 384.8 24.3 261 328-612 37-308 (362)
4 KOG0581 Mitogen-activated prot 100.0 4.5E-46 9.7E-51 362.2 20.9 253 329-603 76-335 (364)
5 KOG0197 Tyrosine kinases [Sign 100.0 8.2E-46 1.8E-50 377.0 17.6 257 329-611 203-465 (468)
6 KOG1026 Nerve growth factor re 100.0 8.3E-45 1.8E-49 387.1 15.5 252 339-611 491-766 (774)
7 KOG0575 Polo-like serine/threo 100.0 6.3E-44 1.4E-48 366.6 17.1 238 339-603 23-269 (592)
8 KOG0615 Serine/threonine prote 100.0 9.3E-44 2E-48 348.0 15.0 243 339-603 177-437 (475)
9 KOG0595 Serine/threonine-prote 100.0 7.9E-43 1.7E-47 342.2 21.0 190 340-538 16-218 (429)
10 KOG0591 NIMA (never in mitosis 100.0 1.9E-42 4.1E-47 322.6 14.5 247 338-602 23-280 (375)
11 KOG0598 Ribosomal protein S6 k 100.0 6.7E-42 1.5E-46 333.1 18.9 238 339-602 30-280 (357)
12 KOG3653 Transforming growth fa 100.0 2.9E-41 6.4E-46 335.8 23.2 260 339-612 215-508 (534)
13 KOG0196 Tyrosine kinase, EPH ( 100.0 4.1E-42 8.9E-47 359.0 13.4 246 339-609 634-893 (996)
14 KOG0193 Serine/threonine prote 100.0 2.5E-41 5.4E-46 345.6 17.3 265 327-617 387-665 (678)
15 KOG0593 Predicted protein kina 100.0 2.4E-41 5.2E-46 318.4 15.0 255 339-602 7-283 (396)
16 KOG0592 3-phosphoinositide-dep 100.0 4.7E-41 1E-45 339.6 16.0 239 339-603 78-338 (604)
17 PHA02988 hypothetical protein; 100.0 3.3E-40 7.2E-45 334.3 19.8 257 327-609 13-281 (283)
18 KOG4721 Serine/threonine prote 100.0 9.5E-41 2.1E-45 337.0 14.1 250 327-610 119-371 (904)
19 KOG1095 Protein tyrosine kinas 100.0 9.5E-41 2.1E-45 368.7 14.3 258 339-617 697-971 (1025)
20 cd05102 PTKc_VEGFR3 Catalytic 100.0 9.4E-40 2E-44 340.1 20.5 252 339-609 12-336 (338)
21 KOG0198 MEKK and related serin 100.0 8.1E-40 1.8E-44 324.7 18.7 249 338-609 21-282 (313)
22 KOG0578 p21-activated serine/t 100.0 2.8E-40 6.1E-45 337.1 15.6 238 340-602 279-522 (550)
23 KOG0661 MAPK related serine/th 100.0 1.3E-40 2.9E-45 331.4 11.8 255 338-603 14-291 (538)
24 KOG0194 Protein tyrosine kinas 100.0 8.8E-40 1.9E-44 338.5 16.9 250 339-612 162-425 (474)
25 KOG0600 Cdc2-related protein k 100.0 2.1E-39 4.6E-44 325.1 18.8 253 339-602 122-399 (560)
26 KOG1094 Discoidin domain recep 100.0 4.4E-39 9.5E-44 326.4 20.0 252 339-607 543-804 (807)
27 KOG0582 Ste20-like serine/thre 100.0 9.3E-39 2E-43 315.9 21.7 256 339-612 31-304 (516)
28 KOG0659 Cdk activating kinase 100.0 2.6E-39 5.7E-44 299.8 15.8 255 338-603 6-281 (318)
29 KOG2052 Activin A type IB rece 100.0 2E-38 4.4E-43 313.3 21.9 257 339-610 216-506 (513)
30 KOG0597 Serine-threonine prote 100.0 3.3E-39 7.2E-44 326.2 15.9 236 339-602 7-250 (808)
31 KOG0616 cAMP-dependent protein 100.0 1.6E-38 3.5E-43 298.9 18.9 199 329-538 41-245 (355)
32 KOG0583 Serine/threonine prote 100.0 3.2E-38 7E-43 326.3 22.9 244 339-608 22-279 (370)
33 cd05096 PTKc_DDR1 Catalytic do 100.0 3.8E-38 8.1E-43 323.1 22.6 254 339-606 10-304 (304)
34 KOG0588 Serine/threonine prote 100.0 1.7E-38 3.6E-43 327.5 18.2 247 339-612 17-272 (786)
35 cd05104 PTKc_Kit Catalytic dom 100.0 7.8E-38 1.7E-42 329.6 23.4 250 339-607 40-374 (375)
36 KOG0580 Serine/threonine prote 100.0 2.7E-39 5.7E-44 295.6 10.3 250 328-604 18-274 (281)
37 KOG0605 NDR and related serine 100.0 2.7E-38 5.8E-43 320.1 18.3 239 339-602 146-444 (550)
38 KOG0201 Serine/threonine prote 100.0 3.2E-39 7E-44 319.1 11.2 237 340-602 19-262 (467)
39 cd05631 STKc_GRK4 Catalytic do 100.0 7.9E-38 1.7E-42 317.5 21.8 253 339-612 5-272 (285)
40 KOG0694 Serine/threonine prote 100.0 1.2E-38 2.7E-43 331.2 16.0 232 339-597 373-613 (694)
41 KOG1989 ARK protein kinase fam 100.0 5.9E-38 1.3E-42 336.5 21.5 252 339-614 42-318 (738)
42 cd05106 PTKc_CSF-1R Catalytic 100.0 9.4E-38 2E-42 328.7 22.4 252 338-608 42-373 (374)
43 cd05114 PTKc_Tec_Rlk Catalytic 100.0 3.5E-37 7.5E-42 307.7 25.3 241 339-604 9-255 (256)
44 cd05072 PTKc_Lyn Catalytic dom 100.0 1.6E-37 3.6E-42 311.0 21.9 245 339-607 11-261 (261)
45 cd05064 PTKc_EphR_A10 Catalyti 100.0 4.2E-37 9.2E-42 309.0 23.6 244 339-607 10-265 (266)
46 cd05048 PTKc_Ror Catalytic Dom 100.0 3.1E-37 6.7E-42 312.8 22.8 248 339-607 10-283 (283)
47 cd05571 STKc_PKB Catalytic dom 100.0 8.1E-38 1.7E-42 323.2 18.7 236 340-602 1-250 (323)
48 PF07714 Pkinase_Tyr: Protein 100.0 1.2E-37 2.7E-42 311.5 19.3 242 339-604 4-259 (259)
49 KOG2345 Serine/threonine prote 100.0 5.2E-38 1.1E-42 288.4 15.0 253 339-608 26-301 (302)
50 KOG4278 Protein tyrosine kinas 100.0 5E-38 1.1E-42 319.8 16.3 248 339-610 272-526 (1157)
51 cd05585 STKc_YPK1_like Catalyt 100.0 1.8E-37 4E-42 319.0 20.9 234 342-602 1-246 (312)
52 PLN00034 mitogen-activated pro 100.0 6.9E-37 1.5E-41 320.3 25.1 245 330-603 72-328 (353)
53 cd05588 STKc_aPKC Catalytic do 100.0 2.4E-37 5.2E-42 320.5 21.0 245 340-603 1-262 (329)
54 KOG0611 Predicted serine/threo 100.0 1E-37 2.2E-42 303.6 16.1 239 339-605 58-305 (668)
55 cd05105 PTKc_PDGFR_alpha Catal 100.0 3.8E-37 8.3E-42 325.4 21.8 252 339-609 42-399 (400)
56 cd05612 STKc_PRKX_like Catalyt 100.0 8.8E-38 1.9E-42 318.1 16.2 238 339-603 6-254 (291)
57 cd05068 PTKc_Frk_like Catalyti 100.0 1.5E-36 3.2E-41 304.1 24.8 245 339-607 11-261 (261)
58 cd05108 PTKc_EGFR Catalytic do 100.0 4.9E-37 1.1E-41 316.6 21.4 248 339-612 12-273 (316)
59 cd05618 STKc_aPKC_iota Catalyt 100.0 4.4E-37 9.5E-42 318.4 21.1 245 340-603 1-262 (329)
60 cd05052 PTKc_Abl Catalytic dom 100.0 1.5E-36 3.2E-41 304.5 24.2 245 339-607 11-262 (263)
61 cd05593 STKc_PKB_gamma Catalyt 100.0 1.6E-37 3.5E-42 321.5 17.7 237 340-603 1-251 (328)
62 cd06649 PKc_MEK2 Catalytic dom 100.0 9E-37 2E-41 316.5 23.3 191 339-537 10-205 (331)
63 cd07871 STKc_PCTAIRE3 Catalyti 100.0 3E-37 6.6E-42 313.8 19.1 253 339-603 10-285 (288)
64 cd05059 PTKc_Tec_like Catalyti 100.0 5.6E-37 1.2E-41 306.2 20.7 241 339-604 9-255 (256)
65 cd05595 STKc_PKB_beta Catalyti 100.0 3.8E-37 8.3E-42 318.1 20.0 237 340-603 1-251 (323)
66 cd05617 STKc_aPKC_zeta Catalyt 100.0 6E-37 1.3E-41 317.2 21.1 239 340-597 1-248 (327)
67 cd05113 PTKc_Btk_Bmx Catalytic 100.0 2.1E-36 4.5E-41 302.1 24.0 242 339-605 9-256 (256)
68 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.2E-37 4.7E-42 321.6 17.6 246 339-603 6-257 (333)
69 PTZ00263 protein kinase A cata 100.0 3.4E-37 7.4E-42 319.3 18.9 238 339-603 23-271 (329)
70 cd05590 STKc_nPKC_eta Catalyti 100.0 6.5E-37 1.4E-41 316.0 20.9 237 340-602 1-252 (320)
71 cd05591 STKc_nPKC_epsilon Cata 100.0 1E-36 2.2E-41 314.8 22.2 238 340-603 1-254 (321)
72 cd05054 PTKc_VEGFR Catalytic d 100.0 8.2E-37 1.8E-41 317.2 21.5 252 339-609 12-335 (337)
73 cd05049 PTKc_Trk Catalytic dom 100.0 3.6E-36 7.8E-41 304.5 25.2 247 339-606 10-280 (280)
74 cd05620 STKc_nPKC_delta Cataly 100.0 3.6E-37 7.8E-42 317.3 17.8 236 340-601 1-246 (316)
75 cd05619 STKc_nPKC_theta Cataly 100.0 2.9E-37 6.3E-42 317.9 17.0 237 340-602 1-247 (316)
76 cd07848 STKc_CDKL5 Catalytic d 100.0 4.2E-37 9E-42 312.6 17.9 255 339-602 6-283 (287)
77 cd05592 STKc_nPKC_theta_delta 100.0 2.6E-36 5.7E-41 310.9 23.5 237 340-602 1-247 (316)
78 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.7E-36 3.6E-41 303.9 21.4 238 340-604 1-261 (262)
79 KOG0577 Serine/threonine prote 100.0 1.8E-37 3.8E-42 314.7 14.0 239 340-603 32-278 (948)
80 KOG0663 Protein kinase PITSLRE 100.0 5.8E-37 1.2E-41 292.6 16.7 254 339-603 81-361 (419)
81 cd05148 PTKc_Srm_Brk Catalytic 100.0 3.8E-36 8.2E-41 301.0 23.6 245 339-607 11-261 (261)
82 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 7.2E-36 1.6E-40 298.9 25.6 244 338-606 10-259 (260)
83 cd05071 PTKc_Src Catalytic dom 100.0 2E-36 4.4E-41 303.3 21.5 244 339-607 11-260 (262)
84 cd05608 STKc_GRK1 Catalytic do 100.0 2E-36 4.2E-41 306.5 21.5 243 342-603 1-257 (280)
85 cd05067 PTKc_Lck_Blk Catalytic 100.0 5.9E-36 1.3E-40 299.6 24.6 244 339-607 11-260 (260)
86 KOG0589 Serine/threonine prote 100.0 4E-37 8.6E-42 312.8 16.2 241 339-603 9-258 (426)
87 cd05047 PTKc_Tie Catalytic dom 100.0 7.4E-36 1.6E-40 300.6 25.4 249 340-608 1-269 (270)
88 PTZ00426 cAMP-dependent protei 100.0 8.2E-37 1.8E-41 317.3 18.9 238 339-603 35-284 (340)
89 cd05084 PTKc_Fes Catalytic dom 100.0 1.5E-36 3.3E-41 302.2 20.1 242 340-606 1-252 (252)
90 KOG0594 Protein kinase PCTAIRE 100.0 4E-36 8.8E-41 292.8 22.2 261 339-607 16-308 (323)
91 cd05584 STKc_p70S6K Catalytic 100.0 1.3E-36 2.9E-41 314.1 20.1 237 340-603 2-256 (323)
92 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2.9E-36 6.3E-41 305.7 22.2 258 339-608 9-282 (283)
93 cd05607 STKc_GRK7 Catalytic do 100.0 3.5E-36 7.7E-41 304.1 22.7 241 342-602 1-249 (277)
94 cd05594 STKc_PKB_alpha Catalyt 100.0 2.8E-37 6.2E-42 319.5 14.8 237 340-603 1-252 (325)
95 cd06650 PKc_MEK1 Catalytic dom 100.0 5E-36 1.1E-40 311.0 24.1 191 339-537 10-205 (333)
96 cd05614 STKc_MSK2_N N-terminal 100.0 2E-36 4.3E-41 314.3 20.9 243 339-603 5-267 (332)
97 KOG4257 Focal adhesion tyrosin 100.0 7.3E-37 1.6E-41 311.9 17.1 256 328-609 383-651 (974)
98 cd05069 PTKc_Yes Catalytic dom 100.0 1.1E-35 2.4E-40 297.6 25.5 243 339-606 11-259 (260)
99 PHA03212 serine/threonine kina 100.0 5.2E-36 1.1E-40 316.6 23.9 249 339-602 97-375 (391)
100 cd05093 PTKc_TrkB Catalytic do 100.0 9.5E-36 2.1E-40 302.8 25.0 251 339-610 10-282 (288)
101 cd05033 PTKc_EphR Catalytic do 100.0 1.2E-35 2.5E-40 298.5 25.2 244 339-607 9-265 (266)
102 cd07869 STKc_PFTAIRE1 Catalyti 100.0 3.4E-36 7.3E-41 308.4 21.7 250 339-602 10-287 (303)
103 cd05101 PTKc_FGFR2 Catalytic d 100.0 7.5E-36 1.6E-40 306.0 24.3 254 338-611 19-300 (304)
104 cd05090 PTKc_Ror1 Catalytic do 100.0 2.3E-36 5E-41 306.5 20.3 247 339-606 10-282 (283)
105 cd05570 STKc_PKC Catalytic dom 100.0 2E-36 4.4E-41 312.1 20.1 238 340-603 1-252 (318)
106 cd05107 PTKc_PDGFR_beta Cataly 100.0 2.9E-36 6.4E-41 318.5 21.7 252 338-608 41-400 (401)
107 KOG0585 Ca2+/calmodulin-depend 100.0 2.7E-36 5.8E-41 300.2 19.9 248 339-612 102-381 (576)
108 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.5E-36 3.2E-41 316.1 19.0 260 339-609 5-298 (338)
109 cd05091 PTKc_Ror2 Catalytic do 100.0 8.6E-36 1.9E-40 302.3 24.2 247 339-606 10-282 (283)
110 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 3.5E-36 7.6E-41 302.8 21.0 248 341-605 2-268 (269)
111 cd05628 STKc_NDR1 Catalytic do 100.0 2.4E-36 5.2E-41 317.4 20.6 190 339-537 6-239 (363)
112 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.6E-36 5.6E-41 301.7 19.8 238 340-605 1-259 (259)
113 KOG0660 Mitogen-activated prot 100.0 1.3E-36 2.7E-41 295.0 16.8 264 340-614 28-323 (359)
114 cd05094 PTKc_TrkC Catalytic do 100.0 9.4E-36 2E-40 303.3 24.1 251 339-610 10-285 (291)
115 cd05116 PTKc_Syk Catalytic dom 100.0 3.5E-36 7.6E-41 300.7 20.4 240 341-607 2-255 (257)
116 cd05605 STKc_GRK4_like Catalyt 100.0 4E-36 8.8E-41 305.0 21.0 244 339-603 5-261 (285)
117 cd05085 PTKc_Fer Catalytic dom 100.0 7.9E-36 1.7E-40 296.7 22.6 241 340-605 1-249 (250)
118 PTZ00267 NIMA-related protein 100.0 8.4E-36 1.8E-40 323.6 24.7 242 339-602 72-322 (478)
119 cd05111 PTK_HER3 Pseudokinase 100.0 3.3E-36 7.1E-41 304.7 20.1 247 339-611 12-272 (279)
120 cd05089 PTKc_Tie1 Catalytic do 100.0 9.2E-36 2E-40 304.3 23.6 253 339-611 7-279 (297)
121 cd08228 STKc_Nek6 Catalytic do 100.0 1.3E-35 2.8E-40 298.2 24.2 251 339-608 7-266 (267)
122 cd05075 PTKc_Axl Catalytic dom 100.0 8.9E-36 1.9E-40 300.2 23.1 248 339-607 4-271 (272)
123 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 3.9E-36 8.5E-41 303.2 20.5 237 341-604 2-273 (274)
124 cd05626 STKc_LATS2 Catalytic d 100.0 2.2E-36 4.8E-41 319.6 19.4 242 339-603 6-305 (381)
125 cd05088 PTKc_Tie2 Catalytic do 100.0 9E-36 1.9E-40 305.2 23.2 254 339-612 12-285 (303)
126 cd05575 STKc_SGK Catalytic dom 100.0 2.8E-36 6.1E-41 311.8 19.6 232 340-598 1-242 (323)
127 KOG1025 Epidermal growth facto 100.0 2.7E-37 5.8E-42 324.0 12.0 252 333-610 695-960 (1177)
128 cd05060 PTKc_Syk_like Catalyti 100.0 1.1E-35 2.4E-40 297.0 23.3 242 340-608 1-256 (257)
129 cd05062 PTKc_IGF-1R Catalytic 100.0 8.4E-36 1.8E-40 301.4 22.6 247 339-606 11-277 (277)
130 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.3E-35 2.8E-40 304.7 24.2 253 339-611 23-303 (307)
131 cd07862 STKc_CDK6 Catalytic do 100.0 3.3E-36 7.2E-41 306.5 19.4 254 339-602 6-286 (290)
132 KOG0658 Glycogen synthase kina 100.0 2.3E-37 5E-42 300.7 10.3 264 340-614 30-319 (364)
133 cd05053 PTKc_FGFR Catalytic do 100.0 1.8E-35 4E-40 301.4 24.8 250 339-608 17-292 (293)
134 cd05115 PTKc_Zap-70 Catalytic 100.0 1.8E-35 3.9E-40 295.5 24.1 241 341-607 2-255 (257)
135 cd05582 STKc_RSK_N N-terminal 100.0 9.3E-37 2E-41 314.7 15.1 233 340-599 2-245 (318)
136 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.1E-35 2.5E-40 301.5 22.4 252 339-608 9-284 (284)
137 cd05616 STKc_cPKC_beta Catalyt 100.0 4.7E-36 1E-40 310.2 19.7 238 339-602 5-256 (323)
138 cd00192 PTKc Catalytic domain 100.0 2.1E-35 4.5E-40 295.2 23.7 245 340-605 1-262 (262)
139 cd05042 PTKc_Aatyk Catalytic d 100.0 5.9E-36 1.3E-40 301.1 19.9 248 341-605 2-268 (269)
140 cd05589 STKc_PKN Catalytic dom 100.0 3.1E-36 6.7E-41 311.6 18.2 238 339-603 4-257 (324)
141 KOG0610 Putative serine/threon 100.0 1.9E-35 4.1E-40 290.3 22.6 249 329-602 74-391 (459)
142 cd05573 STKc_ROCK_NDR_like Cat 100.0 2.9E-36 6.3E-41 315.5 18.2 241 339-603 6-285 (350)
143 cd05045 PTKc_RET Catalytic dom 100.0 1.4E-35 3E-40 302.0 22.6 250 339-609 5-288 (290)
144 KOG0574 STE20-like serine/thre 100.0 2.4E-37 5.2E-42 290.5 8.9 241 339-603 38-283 (502)
145 KOG0599 Phosphorylase kinase g 100.0 2.6E-37 5.7E-42 286.8 9.0 243 339-603 22-283 (411)
146 cd05604 STKc_SGK3 Catalytic do 100.0 3.3E-36 7.2E-41 311.5 18.4 233 340-599 1-243 (325)
147 cd05035 PTKc_Axl_like Catalyti 100.0 2.8E-35 6.1E-40 296.6 24.7 248 339-607 4-272 (273)
148 cd05587 STKc_cPKC Catalytic do 100.0 7.2E-36 1.6E-40 308.9 20.7 238 339-602 5-256 (324)
149 cd08229 STKc_Nek7 Catalytic do 100.0 1.2E-35 2.5E-40 298.5 21.6 251 339-608 7-266 (267)
150 cd05039 PTKc_Csk_like Catalyti 100.0 2.1E-35 4.6E-40 294.7 23.3 244 339-607 11-256 (256)
151 cd05601 STKc_CRIK Catalytic do 100.0 2.2E-36 4.8E-41 313.6 16.7 242 339-603 6-263 (330)
152 cd06637 STKc_TNIK Catalytic do 100.0 9.7E-36 2.1E-40 300.0 20.9 243 339-603 11-269 (272)
153 cd05036 PTKc_ALK_LTK Catalytic 100.0 2E-35 4.3E-40 298.6 23.2 247 339-606 11-277 (277)
154 cd05082 PTKc_Csk Catalytic dom 100.0 2.9E-35 6.2E-40 293.9 24.0 243 339-607 11-256 (256)
155 cd05103 PTKc_VEGFR2 Catalytic 100.0 8.4E-36 1.8E-40 310.7 20.9 254 338-610 11-342 (343)
156 cd05034 PTKc_Src_like Catalyti 100.0 2.4E-35 5.2E-40 295.2 23.4 244 339-606 11-260 (261)
157 cd05112 PTKc_Itk Catalytic dom 100.0 8.3E-36 1.8E-40 297.7 19.9 241 339-604 9-255 (256)
158 cd05040 PTKc_Ack_like Catalyti 100.0 6.9E-36 1.5E-40 298.4 19.4 242 340-605 1-256 (257)
159 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.5E-36 5.5E-41 301.9 16.2 239 340-605 1-258 (258)
160 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 3E-35 6.5E-40 295.4 24.1 251 339-608 7-266 (267)
161 cd05109 PTKc_HER2 Catalytic do 100.0 9.7E-36 2.1E-40 301.3 20.6 247 339-611 12-272 (279)
162 cd05602 STKc_SGK1 Catalytic do 100.0 4.6E-36 9.9E-41 310.5 18.4 235 340-601 1-245 (325)
163 cd05051 PTKc_DDR Catalytic dom 100.0 1.6E-35 3.6E-40 302.2 22.2 254 339-606 10-296 (296)
164 cd05599 STKc_NDR_like Catalyti 100.0 6.6E-36 1.4E-40 314.5 19.7 241 339-603 6-296 (364)
165 cd05043 PTK_Ryk Pseudokinase d 100.0 1.9E-35 4.2E-40 299.2 22.3 250 339-609 11-278 (280)
166 cd06619 PKc_MKK5 Catalytic dom 100.0 2.1E-35 4.6E-40 298.8 22.5 242 339-603 6-253 (279)
167 cd05100 PTKc_FGFR3 Catalytic d 100.0 4.5E-35 9.8E-40 304.3 25.5 254 338-611 16-297 (334)
168 cd05596 STKc_ROCK Catalytic do 100.0 5.2E-36 1.1E-40 315.2 18.7 241 339-603 48-304 (370)
169 cd07868 STKc_CDK8 Catalytic do 100.0 4E-35 8.6E-40 302.5 24.7 194 339-538 6-220 (317)
170 PTZ00283 serine/threonine prot 100.0 1.4E-35 3E-40 322.1 22.2 243 339-603 37-297 (496)
171 cd05055 PTKc_PDGFR Catalytic d 100.0 1.4E-35 3E-40 303.6 21.0 247 339-607 40-301 (302)
172 cd05061 PTKc_InsR Catalytic do 100.0 4.4E-35 9.5E-40 297.9 24.4 255 339-614 11-285 (288)
173 cd05630 STKc_GRK6 Catalytic do 100.0 2E-35 4.4E-40 299.9 21.8 244 339-603 5-261 (285)
174 cd05603 STKc_SGK2 Catalytic do 100.0 9.1E-36 2E-40 307.7 19.6 232 340-598 1-242 (321)
175 cd05063 PTKc_EphR_A2 Catalytic 100.0 5.1E-35 1.1E-39 294.1 24.5 244 339-607 10-267 (268)
176 cd05099 PTKc_FGFR4 Catalytic d 100.0 5.4E-35 1.2E-39 301.1 25.2 253 338-610 16-296 (314)
177 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 3.3E-35 7.1E-40 298.2 23.2 251 338-607 8-283 (284)
178 cd07872 STKc_PCTAIRE2 Catalyti 100.0 8.3E-36 1.8E-40 306.4 19.0 252 339-602 11-285 (309)
179 cd08529 STKc_FA2-like Catalyti 100.0 5.2E-35 1.1E-39 291.7 23.8 241 339-603 5-253 (256)
180 PRK13184 pknD serine/threonine 100.0 2.2E-35 4.8E-40 328.8 23.3 252 339-610 7-293 (932)
181 cd06646 STKc_MAP4K5 Catalytic 100.0 2.2E-35 4.9E-40 296.5 21.1 244 339-604 14-266 (267)
182 cd05032 PTKc_InsR_like Catalyt 100.0 1.9E-35 4.1E-40 298.7 20.7 247 339-606 11-277 (277)
183 cd05058 PTKc_Met_Ron Catalytic 100.0 5.3E-35 1.2E-39 292.9 23.7 245 340-609 1-261 (262)
184 cd05073 PTKc_Hck Catalytic dom 100.0 3.4E-35 7.4E-40 294.1 22.2 244 339-607 11-260 (260)
185 cd05629 STKc_NDR_like_fungal C 100.0 5.7E-36 1.2E-40 316.3 17.3 241 339-603 6-305 (377)
186 KOG0667 Dual-specificity tyros 100.0 4.6E-36 1E-40 312.3 16.0 195 339-540 191-394 (586)
187 cd05041 PTKc_Fes_like Catalyti 100.0 3.1E-35 6.7E-40 292.6 21.5 241 340-605 1-250 (251)
188 cd05632 STKc_GRK5 Catalytic do 100.0 3.3E-35 7.2E-40 298.3 22.0 243 340-603 6-261 (285)
189 cd05625 STKc_LATS1 Catalytic d 100.0 7.4E-36 1.6E-40 316.0 17.9 190 339-537 6-251 (382)
190 cd05065 PTKc_EphR_B Catalytic 100.0 6.3E-35 1.4E-39 293.6 23.5 244 339-607 9-268 (269)
191 cd05092 PTKc_TrkA Catalytic do 100.0 1.4E-35 3E-40 300.3 18.9 247 339-606 10-280 (280)
192 cd05598 STKc_LATS Catalytic do 100.0 4.2E-36 9.2E-41 317.2 15.6 241 339-603 6-301 (376)
193 cd05095 PTKc_DDR2 Catalytic do 100.0 3.2E-35 6.9E-40 300.1 21.6 254 339-606 10-296 (296)
194 cd05615 STKc_cPKC_alpha Cataly 100.0 2E-35 4.3E-40 305.3 20.1 233 339-597 5-246 (323)
195 cd06612 STKc_MST1_2 Catalytic 100.0 4.3E-35 9.2E-40 292.4 21.7 240 339-602 8-252 (256)
196 cd05097 PTKc_DDR_like Catalyti 100.0 2.8E-35 6.1E-40 300.4 20.8 254 339-606 10-295 (295)
197 cd05621 STKc_ROCK2 Catalytic d 100.0 2.4E-35 5.2E-40 309.8 20.8 241 339-603 48-304 (370)
198 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 5.2E-35 1.1E-39 296.5 22.5 252 339-608 9-284 (284)
199 cd06654 STKc_PAK1 Catalytic do 100.0 4.9E-35 1.1E-39 298.7 22.3 240 339-603 25-270 (296)
200 KOG0584 Serine/threonine prote 100.0 5E-36 1.1E-40 308.9 14.9 239 340-602 46-295 (632)
201 PF00069 Pkinase: Protein kina 100.0 1.1E-35 2.3E-40 297.3 17.1 244 339-602 4-256 (260)
202 KOG0033 Ca2+/calmodulin-depend 100.0 4.6E-37 1E-41 281.1 6.3 242 339-603 16-267 (355)
203 cd05044 PTKc_c-ros Catalytic d 100.0 5.8E-35 1.2E-39 293.8 22.2 245 341-606 2-269 (269)
204 cd06615 PKc_MEK Catalytic doma 100.0 5.9E-35 1.3E-39 299.9 22.2 254 339-604 6-288 (308)
205 PHA03211 serine/threonine kina 100.0 8.2E-35 1.8E-39 311.2 24.2 251 339-603 174-455 (461)
206 cd06625 STKc_MEKK3_like Cataly 100.0 4.2E-35 9E-40 293.8 20.6 240 339-603 7-260 (263)
207 cd05066 PTKc_EphR_A Catalytic 100.0 6.2E-35 1.3E-39 293.4 21.8 244 339-607 9-266 (267)
208 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.3E-34 2.8E-39 291.3 23.9 247 341-605 2-267 (268)
209 cd05050 PTKc_Musk Catalytic do 100.0 6.9E-35 1.5E-39 296.4 22.2 247 339-606 10-288 (288)
210 cd05586 STKc_Sck1_like Catalyt 100.0 4.7E-36 1E-40 311.1 13.6 236 342-602 1-252 (330)
211 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1E-34 2.2E-39 294.5 23.1 252 338-608 9-271 (284)
212 cd07876 STKc_JNK2 Catalytic do 100.0 6.8E-35 1.5E-39 306.1 22.4 187 339-537 26-225 (359)
213 cd06643 STKc_SLK Catalytic dom 100.0 9.7E-35 2.1E-39 294.4 22.6 243 338-603 9-262 (282)
214 PTZ00284 protein kinase; Provi 100.0 2.3E-35 5.1E-40 320.0 19.0 255 339-602 134-437 (467)
215 PTZ00036 glycogen synthase kin 100.0 5.1E-35 1.1E-39 313.9 21.3 259 339-609 71-359 (440)
216 PHA03209 serine/threonine kina 100.0 8.5E-35 1.8E-39 304.7 22.4 182 339-534 71-256 (357)
217 KOG0032 Ca2+/calmodulin-depend 100.0 7.2E-35 1.6E-39 301.1 21.4 241 340-603 41-293 (382)
218 cd07853 STKc_NLK Catalytic dom 100.0 5.2E-35 1.1E-39 308.4 20.0 252 339-603 5-288 (372)
219 cd07867 STKc_CDC2L6 Catalytic 100.0 2.3E-34 4.9E-39 296.8 24.4 193 340-538 7-220 (317)
220 cd06638 STKc_myosinIIIA Cataly 100.0 8.7E-35 1.9E-39 295.3 21.0 247 339-604 23-284 (286)
221 cd07863 STKc_CDK4 Catalytic do 100.0 4.8E-35 1E-39 297.5 18.9 255 339-602 5-284 (288)
222 cd08227 PK_STRAD_alpha Pseudok 100.0 1.5E-34 3.3E-39 299.4 23.0 192 339-537 3-213 (327)
223 KOG0199 ACK and related non-re 100.0 1.4E-35 3E-40 306.3 14.8 244 337-605 113-370 (1039)
224 cd05622 STKc_ROCK1 Catalytic d 100.0 4.6E-35 1E-39 307.9 19.1 242 339-604 48-305 (371)
225 cd05057 PTKc_EGFR_like Catalyt 100.0 3.7E-34 8E-39 289.7 24.9 246 339-610 12-271 (279)
226 cd05056 PTKc_FAK Catalytic dom 100.0 5.2E-35 1.1E-39 294.4 18.5 247 339-611 11-269 (270)
227 cd08219 STKc_Nek3 Catalytic do 100.0 1.9E-34 4.1E-39 287.7 22.4 241 339-603 5-252 (255)
228 cd06656 STKc_PAK3 Catalytic do 100.0 1.2E-34 2.6E-39 296.0 21.3 239 339-602 24-268 (297)
229 cd05110 PTKc_HER4 Catalytic do 100.0 4E-35 8.6E-40 300.5 17.8 248 339-612 12-273 (303)
230 KOG1006 Mitogen-activated prot 100.0 6.4E-37 1.4E-41 283.5 4.0 260 327-602 59-326 (361)
231 cd05627 STKc_NDR2 Catalytic do 100.0 6.2E-35 1.4E-39 306.4 19.6 190 339-537 6-239 (360)
232 cd06655 STKc_PAK2 Catalytic do 100.0 1.2E-34 2.6E-39 295.8 20.8 239 339-602 24-268 (296)
233 PHA03207 serine/threonine kina 100.0 1.2E-34 2.6E-39 307.4 21.5 251 339-603 97-375 (392)
234 KOG0607 MAP kinase-interacting 100.0 2.8E-35 6.1E-40 279.0 14.7 258 330-602 74-360 (463)
235 cd06639 STKc_myosinIIIB Cataly 100.0 1.8E-34 3.9E-39 293.8 21.7 246 339-603 27-287 (291)
236 cd07874 STKc_JNK3 Catalytic do 100.0 8.2E-35 1.8E-39 305.0 19.6 253 339-603 22-311 (355)
237 cd07873 STKc_PCTAIRE1 Catalyti 100.0 6.8E-35 1.5E-39 298.5 18.6 252 339-602 11-285 (301)
238 cd06645 STKc_MAP4K3 Catalytic 100.0 1.6E-34 3.4E-39 290.4 20.5 243 339-603 14-265 (267)
239 cd05597 STKc_DMPK_like Catalyt 100.0 2.8E-34 6.1E-39 297.7 22.9 244 339-603 6-266 (331)
240 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.4E-34 3.1E-39 293.1 20.2 242 339-602 21-278 (282)
241 cd06644 STKc_STK10_LOK Catalyt 100.0 2.9E-34 6.3E-39 292.5 22.4 241 339-602 17-268 (292)
242 cd07861 STKc_CDK1_euk Catalyti 100.0 3.7E-34 8E-39 290.5 23.1 256 339-603 5-282 (285)
243 cd06642 STKc_STK25-YSK1 Cataly 100.0 2E-34 4.4E-39 291.3 21.0 238 339-603 9-253 (277)
244 cd06631 STKc_YSK4 Catalytic do 100.0 1.9E-34 4.1E-39 289.5 20.5 240 339-602 5-261 (265)
245 cd08221 STKc_Nek9 Catalytic do 100.0 5.3E-34 1.2E-38 284.6 23.5 242 339-604 5-254 (256)
246 cd07875 STKc_JNK1 Catalytic do 100.0 1.9E-34 4E-39 303.3 21.2 187 339-537 29-228 (364)
247 cd06611 STKc_SLK_like Catalyti 100.0 2E-34 4.4E-39 291.7 20.4 242 339-603 10-262 (280)
248 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 3E-34 6.4E-39 291.5 21.5 245 339-603 6-262 (286)
249 cd07847 STKc_CDKL1_4 Catalytic 100.0 6.3E-34 1.4E-38 288.9 23.9 256 339-603 6-283 (286)
250 cd08528 STKc_Nek10 Catalytic d 100.0 2.2E-34 4.8E-39 289.6 20.0 247 339-605 5-268 (269)
251 cd06624 STKc_ASK Catalytic dom 100.0 3.5E-34 7.6E-39 288.0 21.4 241 340-603 14-265 (268)
252 cd05083 PTKc_Chk Catalytic dom 100.0 5.5E-34 1.2E-38 284.2 22.6 241 339-606 11-253 (254)
253 cd06640 STKc_MST4 Catalytic do 100.0 8E-34 1.7E-38 286.9 23.7 238 339-603 9-253 (277)
254 cd06617 PKc_MKK3_6 Catalytic d 100.0 5.3E-34 1.1E-38 289.1 22.5 244 339-602 6-260 (283)
255 cd06613 STKc_MAP4K3_like Catal 100.0 6.3E-34 1.4E-38 284.9 22.8 243 339-602 8-259 (262)
256 KOG4279 Serine/threonine prote 100.0 4.4E-35 9.6E-40 301.8 14.4 240 340-602 581-831 (1226)
257 cd06609 STKc_MST3_like Catalyt 100.0 3.4E-34 7.3E-39 289.2 20.7 239 339-603 6-251 (274)
258 cd08223 STKc_Nek4 Catalytic do 100.0 1.1E-33 2.3E-38 282.5 24.1 241 339-603 5-254 (257)
259 cd05046 PTK_CCK4 Pseudokinase 100.0 2.8E-34 6.1E-39 289.9 20.0 247 339-605 10-274 (275)
260 cd05623 STKc_MRCK_alpha Cataly 100.0 7.7E-34 1.7E-38 294.7 23.7 244 339-603 6-266 (332)
261 cd06607 STKc_TAO Catalytic dom 100.0 4.1E-34 9E-39 293.5 21.5 241 339-604 20-268 (307)
262 cd06628 STKc_MAPKKK_Byr2_like 100.0 3.3E-34 7E-39 288.0 20.2 238 339-602 5-263 (267)
263 KOG0983 Mitogen-activated prot 100.0 4.3E-35 9.4E-40 272.3 12.3 257 324-603 84-349 (391)
264 cd06659 STKc_PAK6 Catalytic do 100.0 2.4E-34 5.2E-39 293.7 19.2 239 340-603 27-271 (297)
265 cd05074 PTKc_Tyro3 Catalytic d 100.0 6.7E-34 1.4E-38 286.7 22.1 248 339-607 4-272 (273)
266 cd07878 STKc_p38beta_MAPK11 Ca 100.0 9.5E-35 2.1E-39 303.1 16.4 256 339-608 20-305 (343)
267 cd06616 PKc_MKK4 Catalytic dom 100.0 5.5E-34 1.2E-38 289.8 21.4 249 339-603 9-267 (288)
268 cd06658 STKc_PAK5 Catalytic do 100.0 1.8E-34 3.9E-39 293.9 17.9 240 339-603 27-272 (292)
269 cd05624 STKc_MRCK_beta Catalyt 100.0 3.1E-34 6.6E-39 297.5 19.9 244 339-603 6-266 (331)
270 cd06608 STKc_myosinIII_like Ca 100.0 4.4E-34 9.6E-39 288.0 20.5 245 339-602 11-271 (275)
271 smart00219 TyrKc Tyrosine kina 100.0 9.7E-34 2.1E-38 282.7 22.5 242 339-604 4-258 (258)
272 KOG0579 Ste20-like serine/thre 100.0 2.4E-35 5.1E-40 300.9 10.7 243 337-602 35-288 (1187)
273 KOG0200 Fibroblast/platelet-de 100.0 3.4E-34 7.4E-39 316.9 20.9 253 337-608 299-580 (609)
274 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.1E-33 2.4E-38 287.5 22.9 253 340-603 7-266 (287)
275 cd08218 STKc_Nek1 Catalytic do 100.0 1E-33 2.2E-38 282.6 22.3 241 339-603 5-253 (256)
276 cd05611 STKc_Rim15_like Cataly 100.0 3.8E-34 8.2E-39 286.4 19.2 241 340-602 2-247 (260)
277 KOG0596 Dual specificity; seri 100.0 1.1E-34 2.4E-39 293.4 15.1 242 337-602 364-626 (677)
278 PHA03390 pk1 serine/threonine- 100.0 1.7E-33 3.8E-38 282.8 23.7 235 342-602 24-261 (267)
279 cd07839 STKc_CDK5 Catalytic do 100.0 4.3E-34 9.3E-39 289.9 19.4 251 339-603 5-281 (284)
280 KOG4717 Serine/threonine prote 100.0 2.4E-34 5.3E-39 287.6 16.9 239 339-603 23-270 (864)
281 cd06614 STKc_PAK Catalytic dom 100.0 1.1E-33 2.3E-38 287.4 22.1 241 340-603 25-270 (286)
282 cd07837 STKc_CdkB_plant Cataly 100.0 1.5E-33 3.2E-38 287.7 23.0 255 339-603 6-291 (295)
283 cd05633 STKc_GRK3 Catalytic do 100.0 9.9E-34 2.1E-38 286.5 21.5 240 341-603 1-255 (279)
284 cd06605 PKc_MAPKK Catalytic do 100.0 1.1E-33 2.3E-38 283.9 21.5 246 339-603 6-257 (265)
285 PTZ00266 NIMA-related protein 100.0 1.2E-33 2.7E-38 316.1 24.2 251 339-608 18-302 (1021)
286 cd06632 STKc_MEKK1_plant Catal 100.0 9.6E-34 2.1E-38 282.8 21.0 239 339-602 5-254 (258)
287 cd06635 STKc_TAO1 Catalytic do 100.0 1.4E-33 3.1E-38 290.8 22.9 245 339-608 30-282 (317)
288 cd05609 STKc_MAST Catalytic do 100.0 9.3E-34 2E-38 290.6 20.8 244 339-606 6-273 (305)
289 cd07846 STKc_CDKL2_3 Catalytic 100.0 5E-34 1.1E-38 289.7 18.3 253 339-603 6-283 (286)
290 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.3E-33 2.7E-38 283.5 21.1 247 339-603 6-264 (267)
291 cd07841 STKc_CDK7 Catalytic do 100.0 9.8E-34 2.1E-38 289.4 20.6 254 339-603 5-282 (298)
292 cd06651 STKc_MEKK3 Catalytic d 100.0 2.1E-33 4.6E-38 282.1 22.5 238 339-602 7-260 (266)
293 cd06630 STKc_MEKK1 Catalytic d 100.0 1.6E-33 3.4E-38 283.2 21.4 242 339-602 5-263 (268)
294 KOG0986 G protein-coupled rece 100.0 7.6E-35 1.7E-39 288.0 11.5 235 340-595 191-433 (591)
295 cd06641 STKc_MST3 Catalytic do 100.0 2E-33 4.4E-38 284.0 22.3 238 339-603 9-253 (277)
296 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.9E-33 4.1E-38 283.3 21.8 244 339-603 6-269 (272)
297 cd06647 STKc_PAK_I Catalytic d 100.0 1.5E-33 3.3E-38 287.2 21.4 240 339-603 24-269 (293)
298 cd06623 PKc_MAPKK_plant_like C 100.0 2.1E-33 4.6E-38 281.4 22.0 242 339-603 6-256 (264)
299 cd06917 STKc_NAK1_like Catalyt 100.0 1.9E-33 4.1E-38 284.2 21.7 240 339-603 6-255 (277)
300 cd05574 STKc_phototropin_like 100.0 1.1E-33 2.5E-38 291.5 20.4 240 340-602 7-288 (316)
301 cd06626 STKc_MEKK4 Catalytic d 100.0 1.4E-33 3E-38 282.9 20.4 241 339-602 5-260 (264)
302 cd07860 STKc_CDK2_3 Catalytic 100.0 2E-33 4.2E-38 285.1 21.7 252 339-603 5-281 (284)
303 cd07844 STKc_PCTAIRE_like Cata 100.0 1.5E-33 3.3E-38 287.0 21.0 252 339-602 10-287 (291)
304 cd06648 STKc_PAK_II Catalytic 100.0 1.4E-33 3.1E-38 286.3 20.6 239 339-602 24-268 (285)
305 cd07831 STKc_MOK Catalytic dom 100.0 1.1E-33 2.5E-38 286.4 19.8 253 339-603 4-279 (282)
306 cd07833 STKc_CDKL Catalytic do 100.0 7.6E-34 1.6E-38 288.6 18.3 252 339-602 6-284 (288)
307 cd08220 STKc_Nek8 Catalytic do 100.0 3.3E-33 7.2E-38 278.7 22.5 241 339-603 5-253 (256)
308 cd05577 STKc_GRK Catalytic dom 100.0 2.4E-33 5.1E-38 283.5 21.7 240 342-602 1-253 (277)
309 cd07870 STKc_PFTAIRE2 Catalyti 100.0 2.5E-33 5.4E-38 285.4 21.9 250 339-602 10-287 (291)
310 cd07842 STKc_CDK8_like Catalyt 100.0 2.4E-33 5.3E-38 288.9 21.9 196 339-539 5-221 (316)
311 cd07832 STKc_CCRK Catalytic do 100.0 4.9E-33 1.1E-37 282.4 23.6 253 339-603 5-282 (286)
312 cd06652 STKc_MEKK2 Catalytic d 100.0 2.5E-33 5.5E-38 281.3 21.2 239 339-603 7-261 (265)
313 cd08225 STKc_Nek5 Catalytic do 100.0 3.6E-33 7.9E-38 278.6 22.1 241 339-603 5-254 (257)
314 cd08217 STKc_Nek2 Catalytic do 100.0 2.5E-33 5.5E-38 280.7 21.0 245 340-603 6-262 (265)
315 cd05572 STKc_cGK_PKG Catalytic 100.0 2.6E-33 5.7E-38 280.7 21.0 238 342-602 1-251 (262)
316 cd06618 PKc_MKK7 Catalytic dom 100.0 1.6E-33 3.5E-38 287.6 19.6 252 329-604 12-274 (296)
317 cd07843 STKc_CDC2L1 Catalytic 100.0 2.4E-33 5.3E-38 285.8 19.8 251 339-603 10-290 (293)
318 cd05122 PKc_STE Catalytic doma 100.0 4.4E-33 9.6E-38 276.6 21.0 242 339-603 5-251 (253)
319 PHA03210 serine/threonine kina 100.0 8.8E-34 1.9E-38 308.9 17.2 260 339-603 153-454 (501)
320 cd05580 STKc_PKA Catalytic dom 100.0 5.3E-33 1.1E-37 282.9 21.6 237 339-602 6-253 (290)
321 cd05578 STKc_Yank1 Catalytic d 100.0 1.8E-33 3.9E-38 281.2 17.7 239 339-601 5-253 (258)
322 cd06634 STKc_TAO2 Catalytic do 100.0 4.8E-33 1E-37 285.7 21.3 245 339-608 20-272 (308)
323 cd06657 STKc_PAK4 Catalytic do 100.0 3.6E-33 7.9E-38 284.2 20.0 239 339-602 25-269 (292)
324 cd07835 STKc_CDK1_like Catalyt 100.0 1E-32 2.2E-37 279.6 22.8 255 339-603 4-280 (283)
325 KOG0604 MAP kinase-activated p 100.0 5.9E-34 1.3E-38 268.1 12.5 250 337-606 65-325 (400)
326 cd05579 STKc_MAST_like Catalyt 100.0 3E-33 6.5E-38 280.2 18.6 238 342-604 1-255 (265)
327 cd07836 STKc_Pho85 Catalytic d 100.0 5.2E-33 1.1E-37 281.9 20.4 255 339-602 5-280 (284)
328 cd06633 STKc_TAO3 Catalytic do 100.0 1E-32 2.2E-37 283.9 22.7 249 329-603 17-273 (313)
329 cd05606 STKc_beta_ARK Catalyti 100.0 8.5E-33 1.8E-37 279.6 21.6 240 341-603 1-255 (278)
330 PHA02882 putative serine/threo 100.0 5.3E-33 1.2E-37 283.3 20.1 246 339-604 17-293 (294)
331 cd06606 STKc_MAPKKK Catalytic 100.0 1.9E-32 4E-37 273.2 23.3 241 339-603 5-257 (260)
332 cd07865 STKc_CDK9 Catalytic do 100.0 5.1E-33 1.1E-37 285.7 19.7 252 339-603 17-307 (310)
333 cd08226 PK_STRAD_beta Pseudoki 100.0 2.7E-32 5.8E-37 282.8 25.1 263 340-612 4-319 (328)
334 cd08216 PK_STRAD Pseudokinase 100.0 1.2E-32 2.6E-37 283.6 22.3 254 340-603 8-295 (314)
335 cd07840 STKc_CDK9_like Catalyt 100.0 5.7E-33 1.2E-37 281.9 19.5 253 339-603 4-284 (287)
336 cd05118 STKc_CMGC Catalytic do 100.0 5.1E-33 1.1E-37 281.7 18.1 253 339-603 4-280 (283)
337 PTZ00024 cyclin-dependent prot 100.0 5.7E-33 1.2E-37 288.8 18.6 252 339-603 14-313 (335)
338 cd07845 STKc_CDK10 Catalytic d 100.0 6E-33 1.3E-37 285.2 18.1 253 339-603 12-290 (309)
339 cd07838 STKc_CDK4_6_like Catal 100.0 5.2E-32 1.1E-36 274.9 24.6 251 339-602 4-283 (287)
340 cd07852 STKc_MAPK15 Catalytic 100.0 3.3E-32 7.1E-37 283.2 23.5 259 339-610 12-304 (337)
341 KOG0666 Cyclin C-dependent kin 100.0 2.6E-33 5.6E-38 264.9 13.5 194 339-537 29-243 (438)
342 cd05583 STKc_MSK_N N-terminal 100.0 2.1E-32 4.5E-37 278.3 21.1 246 339-606 5-266 (288)
343 KOG1035 eIF-2alpha kinase GCN2 100.0 2.9E-33 6.2E-38 306.2 15.6 246 328-602 478-870 (1351)
344 cd07858 STKc_TEY_MAPK_plant Ca 100.0 6.3E-33 1.4E-37 288.5 17.5 257 339-610 10-300 (337)
345 cd07850 STKc_JNK Catalytic dom 100.0 2.3E-32 5E-37 286.2 21.6 253 339-603 21-311 (353)
346 cd07849 STKc_ERK1_2_like Catal 100.0 8E-33 1.7E-37 287.7 18.0 256 339-608 10-299 (336)
347 cd07830 STKc_MAK_like Catalyti 100.0 3.9E-32 8.4E-37 275.4 22.4 258 339-603 4-280 (283)
348 PLN00009 cyclin-dependent kina 100.0 1.4E-32 3E-37 280.4 19.2 252 339-602 7-283 (294)
349 cd05613 STKc_MSK1_N N-terminal 100.0 3.6E-32 7.8E-37 276.8 22.0 243 339-603 5-268 (290)
350 cd08530 STKc_CNK2-like Catalyt 100.0 4E-32 8.7E-37 270.8 21.5 243 339-603 5-253 (256)
351 cd06627 STKc_Cdc7_like Catalyt 100.0 5.2E-32 1.1E-36 269.5 22.0 238 339-602 5-250 (254)
352 KOG4250 TANK binding protein k 100.0 5.1E-33 1.1E-37 290.2 15.1 271 339-617 18-320 (732)
353 KOG0586 Serine/threonine prote 100.0 1.1E-32 2.3E-37 284.2 16.7 238 339-603 61-306 (596)
354 KOG0587 Traf2- and Nck-interac 100.0 1.7E-32 3.6E-37 291.5 18.4 243 339-602 24-281 (953)
355 cd07855 STKc_ERK5 Catalytic do 100.0 8.2E-33 1.8E-37 287.4 15.7 259 339-610 10-303 (334)
356 cd08215 STKc_Nek Catalytic dom 100.0 1.3E-31 2.9E-36 267.1 23.7 243 339-603 5-255 (258)
357 KOG4645 MAPKKK (MAP kinase kin 100.0 5.7E-34 1.2E-38 313.1 6.8 239 339-603 1240-1494(1509)
358 cd07864 STKc_CDK12 Catalytic d 100.0 2.6E-32 5.6E-37 279.4 18.4 253 339-603 12-299 (302)
359 cd07879 STKc_p38delta_MAPK13 C 100.0 1.9E-32 4.1E-37 285.5 17.0 256 339-612 20-308 (342)
360 cd07834 STKc_MAPK Catalytic do 100.0 1.4E-31 3E-36 277.8 23.1 258 339-612 5-300 (330)
361 KOG1024 Receptor-like protein 100.0 1.2E-32 2.6E-37 267.6 14.0 250 339-609 289-557 (563)
362 cd05123 STKc_AGC Catalytic dom 100.0 1.2E-31 2.6E-36 266.4 21.6 231 342-599 1-240 (250)
363 KOG1151 Tousled-like protein k 100.0 7.1E-33 1.5E-37 272.6 12.2 245 339-602 468-740 (775)
364 cd06653 STKc_MEKK3_like_1 Cata 100.0 1E-31 2.3E-36 269.5 21.0 239 339-603 7-261 (264)
365 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.5E-31 3.4E-36 276.8 22.7 260 339-610 15-297 (328)
366 cd07857 STKc_MPK1 Catalytic do 100.0 8E-32 1.7E-36 279.7 20.5 254 339-602 5-291 (332)
367 cd05581 STKc_PDK1 Catalytic do 100.0 2.2E-32 4.7E-37 276.6 15.6 238 339-602 6-276 (280)
368 KOG0671 LAMMER dual specificit 100.0 1.1E-32 2.3E-37 268.5 12.3 258 339-603 94-406 (415)
369 cd07829 STKc_CDK_like Catalyti 100.0 1.5E-31 3.2E-36 270.8 20.7 252 340-603 5-279 (282)
370 cd07866 STKc_BUR1 Catalytic do 100.0 5E-32 1.1E-36 278.5 16.9 249 339-602 13-307 (311)
371 KOG0690 Serine/threonine prote 100.0 7.9E-33 1.7E-37 262.8 9.6 193 339-540 173-374 (516)
372 cd08222 STKc_Nek11 Catalytic d 100.0 1.9E-31 4.2E-36 266.8 19.9 242 339-603 5-257 (260)
373 cd07877 STKc_p38alpha_MAPK14 C 100.0 8.6E-32 1.9E-36 280.8 18.1 248 339-603 22-300 (345)
374 cd05576 STKc_RPK118_like Catal 100.0 1.6E-31 3.6E-36 263.5 18.3 219 345-598 4-224 (237)
375 cd07851 STKc_p38 Catalytic dom 100.0 1.1E-31 2.5E-36 279.7 17.9 247 339-602 20-297 (343)
376 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.3E-31 2.9E-36 279.1 17.5 251 339-602 10-299 (342)
377 cd07880 STKc_p38gamma_MAPK12 C 100.0 9.6E-32 2.1E-36 280.2 16.3 259 339-610 20-307 (343)
378 KOG0984 Mitogen-activated prot 100.0 1.5E-31 3.2E-36 239.3 14.7 214 317-536 31-254 (282)
379 cd05610 STKc_MASTL Catalytic d 100.0 4.8E-31 1E-35 296.3 21.0 139 339-486 9-152 (669)
380 KOG0612 Rho-associated, coiled 100.0 4E-32 8.6E-37 295.0 11.4 240 339-602 80-337 (1317)
381 KOG0603 Ribosomal protein S6 k 100.0 2E-31 4.2E-36 276.3 14.8 237 339-606 327-566 (612)
382 KOG0696 Serine/threonine prote 100.0 5.8E-32 1.3E-36 264.1 10.1 194 339-540 354-556 (683)
383 KOG0662 Cyclin-dependent kinas 100.0 2.3E-31 4.9E-36 232.8 11.5 253 339-602 7-282 (292)
384 KOG4236 Serine/threonine prote 100.0 1.7E-31 3.6E-36 268.0 12.0 250 329-602 558-818 (888)
385 smart00220 S_TKc Serine/Threon 100.0 1.3E-29 2.7E-34 249.9 21.3 234 346-602 1-240 (244)
386 KOG0669 Cyclin T-dependent kin 100.0 7.8E-32 1.7E-36 247.8 4.4 258 339-605 22-317 (376)
387 PLN03225 Serine/threonine-prot 100.0 4.8E-30 1E-34 281.2 18.2 252 339-603 137-450 (566)
388 KOG0614 cGMP-dependent protein 100.0 2.2E-31 4.7E-36 266.5 5.4 250 327-603 415-677 (732)
389 PLN03224 probable serine/threo 100.0 4.2E-29 9E-34 266.9 19.9 250 339-603 150-500 (507)
390 KOG1290 Serine/threonine prote 100.0 1E-28 2.2E-33 247.0 20.4 152 314-471 54-221 (590)
391 KOG0695 Serine/threonine prote 100.0 1.7E-29 3.6E-34 241.0 14.1 238 339-595 255-502 (593)
392 KOG1027 Serine/threonine prote 100.0 8.6E-30 1.9E-34 269.8 9.9 239 339-602 514-766 (903)
393 KOG0608 Warts/lats-like serine 100.0 7.6E-29 1.6E-33 253.8 14.0 193 340-541 635-878 (1034)
394 KOG0664 Nemo-like MAPK-related 100.0 3.3E-30 7.1E-35 239.6 2.7 190 339-538 58-262 (449)
395 KOG1345 Serine/threonine kinas 100.0 1.8E-28 3.9E-33 228.1 12.1 256 329-604 20-285 (378)
396 cd00180 PKc Catalytic domain o 100.0 3.8E-27 8.3E-32 226.5 21.7 205 342-603 1-214 (215)
397 KOG1152 Signal transduction se 100.0 8.6E-29 1.9E-33 251.6 10.2 189 339-535 566-770 (772)
398 KOG0670 U4/U6-associated splic 100.0 1.2E-28 2.5E-33 247.6 8.6 274 324-603 419-746 (752)
399 KOG0668 Casein kinase II, alph 100.0 5.5E-28 1.2E-32 219.6 12.1 251 339-603 43-322 (338)
400 KOG0665 Jun-N-terminal kinase 99.9 3.9E-27 8.4E-32 224.6 10.5 246 340-603 23-310 (369)
401 smart00221 STYKc Protein kinas 99.9 1.1E-25 2.4E-30 219.3 19.3 190 339-536 4-202 (225)
402 KOG0576 Mitogen-activated prot 99.9 7.9E-27 1.7E-31 241.2 3.7 242 339-602 20-270 (829)
403 smart00750 KIND kinase non-cat 99.9 7.1E-25 1.5E-29 205.6 15.5 170 415-610 1-172 (176)
404 KOG1167 Serine/threonine prote 99.9 2.7E-25 5.8E-30 220.0 11.3 187 339-537 41-281 (418)
405 PLN00181 protein SPA1-RELATED; 99.9 2.1E-25 4.6E-30 256.8 11.9 187 390-603 33-265 (793)
406 KOG0195 Integrin-linked kinase 99.9 3.4E-25 7.3E-30 206.2 6.7 256 328-608 186-447 (448)
407 PLN00113 leucine-rich repeat r 99.9 4.3E-23 9.4E-28 244.2 14.6 185 28-215 28-217 (968)
408 KOG1165 Casein kinase (serine/ 99.9 8E-22 1.7E-26 189.0 17.5 251 339-608 33-300 (449)
409 PRK09188 serine/threonine prot 99.9 1.4E-21 3.1E-26 200.5 15.1 152 339-509 23-195 (365)
410 KOG1164 Casein kinase (serine/ 99.9 2.8E-20 6.1E-25 191.5 23.3 253 339-611 23-301 (322)
411 COG0515 SPS1 Serine/threonine 99.8 1.5E-19 3.2E-24 186.3 24.2 252 339-603 5-275 (384)
412 KOG0590 Checkpoint kinase and 99.8 1.2E-21 2.5E-26 214.3 6.3 245 339-602 323-584 (601)
413 KOG1163 Casein kinase (serine/ 99.8 2E-20 4.3E-25 171.9 13.2 193 339-540 20-227 (341)
414 PRK12274 serine/threonine prot 99.8 1.1E-19 2.5E-24 169.4 15.5 182 339-540 7-213 (218)
415 cd05147 RIO1_euk RIO kinase fa 99.8 5E-20 1.1E-24 173.9 12.7 138 340-489 3-168 (190)
416 PLN03150 hypothetical protein; 99.8 1.3E-19 2.9E-24 201.1 15.5 133 25-182 368-508 (623)
417 cd05145 RIO1_like RIO kinase f 99.8 3.5E-19 7.6E-24 168.8 15.5 138 340-490 3-169 (190)
418 PRK10359 lipopolysaccharide co 99.8 1.2E-19 2.6E-24 173.1 10.9 163 339-528 36-216 (232)
419 KOG1023 Natriuretic peptide re 99.8 5.5E-19 1.2E-23 184.5 11.9 210 388-611 5-228 (484)
420 KOG0603 Ribosomal protein S6 k 99.8 1.1E-19 2.3E-24 189.5 4.1 186 341-536 1-193 (612)
421 KOG4158 BRPK/PTEN-induced prot 99.8 1.5E-18 3.2E-23 170.3 11.8 193 387-605 273-512 (598)
422 PF14531 Kinase-like: Kinase-l 99.8 4.3E-19 9.2E-24 174.5 7.8 230 339-594 17-288 (288)
423 KOG1240 Protein kinase contain 99.8 7.3E-19 1.6E-23 191.8 7.6 238 339-603 28-291 (1431)
424 PRK10345 hypothetical protein; 99.7 2E-17 4.4E-22 157.5 14.3 134 339-485 7-156 (210)
425 KOG1166 Mitotic checkpoint ser 99.7 3.6E-18 7.9E-23 190.3 9.8 185 339-533 703-902 (974)
426 PRK14879 serine/threonine prot 99.7 1.7E-16 3.6E-21 153.4 14.6 133 340-487 2-143 (211)
427 TIGR03724 arch_bud32 Kae1-asso 99.7 2.4E-16 5.2E-21 150.9 13.1 130 341-488 1-139 (199)
428 smart00090 RIO RIO-like kinase 99.7 2.8E-16 6.1E-21 153.5 13.8 139 339-490 33-200 (237)
429 PRK09605 bifunctional UGMP fam 99.7 5E-16 1.1E-20 170.9 14.7 131 339-488 338-477 (535)
430 cd05144 RIO2_C RIO kinase fami 99.7 6.3E-16 1.4E-20 147.7 13.4 132 339-489 20-176 (198)
431 KOG0617 Ras suppressor protein 99.6 9.6E-18 2.1E-22 146.6 -2.7 146 67-216 31-179 (264)
432 cd05120 APH_ChoK_like Aminogly 99.6 2.1E-15 4.6E-20 137.0 11.1 135 340-488 4-139 (155)
433 KOG1033 eIF-2alpha kinase PEK/ 99.6 3.6E-16 7.9E-21 160.2 5.1 118 404-529 330-457 (516)
434 KOG0606 Microtubule-associated 99.6 6.6E-16 1.4E-20 169.0 5.3 196 339-595 88-304 (1205)
435 cd05119 RIO RIO kinase family, 99.6 4.9E-15 1.1E-19 140.3 9.3 135 340-489 3-165 (187)
436 PRK01723 3-deoxy-D-manno-octul 99.5 9.3E-14 2E-18 136.1 15.2 136 338-488 35-192 (239)
437 KOG0617 Ras suppressor protein 99.5 7.4E-16 1.6E-20 134.8 -2.9 136 69-210 56-196 (264)
438 KOG4194 Membrane glycoprotein 99.5 7.5E-15 1.6E-19 150.9 1.5 146 69-216 269-422 (873)
439 KOG0444 Cytoskeletal regulator 99.5 3.8E-15 8.2E-20 153.8 -1.2 140 69-212 126-293 (1255)
440 TIGR01982 UbiB 2-polyprenylphe 99.5 5.5E-13 1.2E-17 142.0 13.5 140 340-489 123-308 (437)
441 KOG0590 Checkpoint kinase and 99.4 1.6E-14 3.4E-19 158.5 -0.2 244 340-602 26-285 (601)
442 KOG1266 Protein kinase [Signal 99.4 3.2E-13 6.9E-18 130.3 8.3 202 382-607 120-335 (458)
443 KOG4237 Extracellular matrix p 99.4 6.6E-14 1.4E-18 138.0 3.2 164 62-226 51-365 (498)
444 KOG0444 Cytoskeletal regulator 99.3 1.7E-13 3.6E-18 141.9 0.8 126 70-199 104-258 (1255)
445 cd05151 ChoK Choline Kinase (C 99.3 1.4E-11 3E-16 114.5 10.9 131 340-487 4-136 (170)
446 KOG4194 Membrane glycoprotein 99.3 1.8E-12 3.9E-17 133.6 5.0 146 69-216 78-227 (873)
447 KOG0472 Leucine-rich repeat pr 99.3 9.7E-14 2.1E-18 137.0 -4.1 139 71-216 139-281 (565)
448 PRK04750 ubiB putative ubiquin 99.2 5.5E-10 1.2E-14 120.4 20.0 140 340-489 125-315 (537)
449 KOG0472 Leucine-rich repeat pr 99.2 5.5E-13 1.2E-17 131.7 -4.5 142 69-215 68-211 (565)
450 KOG0601 Cyclin-dependent kinas 99.2 2.2E-11 4.8E-16 127.8 6.7 239 338-602 118-378 (524)
451 PF14580 LRR_9: Leucine-rich r 99.2 1.4E-11 3.1E-16 113.0 3.1 125 90-218 15-148 (175)
452 PLN03150 hypothetical protein; 99.2 9.3E-11 2E-15 130.8 10.1 108 95-224 419-532 (623)
453 PF14580 LRR_9: Leucine-rich r 99.1 4.4E-11 9.6E-16 109.7 4.1 119 69-193 19-147 (175)
454 cd05146 RIO3_euk RIO kinase fa 99.1 1.2E-09 2.7E-14 102.2 13.8 136 340-489 3-175 (197)
455 KOG0532 Leucine-rich repeat (L 99.1 3.6E-12 7.7E-17 131.3 -3.6 140 71-215 77-239 (722)
456 PRK15387 E3 ubiquitin-protein 99.1 8.5E-11 1.8E-15 131.1 6.4 69 141-216 383-451 (788)
457 cd05154 ACAD10_11_like Acyl-Co 99.1 7.9E-10 1.7E-14 107.5 12.5 143 340-488 4-207 (223)
458 KOG0601 Cyclin-dependent kinas 99.1 9.7E-11 2.1E-15 123.0 6.1 240 340-608 271-519 (524)
459 PRK15370 E3 ubiquitin-protein 99.1 1.5E-10 3.2E-15 129.9 7.1 118 70-199 179-296 (754)
460 PRK15370 E3 ubiquitin-protein 99.1 3.1E-10 6.7E-15 127.3 8.6 136 69-217 199-335 (754)
461 KOG1243 Protein kinase [Genera 99.0 5.2E-09 1.1E-13 111.2 16.6 162 355-531 34-200 (690)
462 KOG0618 Serine/threonine phosp 99.0 5.5E-11 1.2E-15 129.2 1.2 148 69-219 310-488 (1081)
463 PRK15387 E3 ubiquitin-protein 99.0 6.2E-10 1.3E-14 124.3 9.3 94 70-178 223-316 (788)
464 KOG0618 Serine/threonine phosp 99.0 5E-11 1.1E-15 129.5 -0.6 127 68-198 358-488 (1081)
465 COG3642 Mn2+-dependent serine/ 99.0 8.4E-09 1.8E-13 93.2 13.6 131 340-488 2-141 (204)
466 KOG1259 Nischarin, modulator o 99.0 6.2E-11 1.3E-15 113.1 -0.6 105 92-199 282-387 (490)
467 KOG3087 Serine/threonine prote 99.0 7.8E-09 1.7E-13 92.9 11.6 141 340-488 13-166 (229)
468 KOG0532 Leucine-rich repeat (L 98.9 3.5E-11 7.7E-16 124.1 -6.5 138 73-215 54-194 (722)
469 KOG1259 Nischarin, modulator o 98.9 2.5E-10 5.4E-15 109.0 -1.1 126 69-200 284-413 (490)
470 PRK15123 lipopolysaccharide co 98.9 6.1E-08 1.3E-12 96.1 15.7 140 340-487 28-194 (268)
471 PLN03210 Resistant to P. syrin 98.8 9.9E-09 2.1E-13 122.9 11.1 141 69-213 589-731 (1153)
472 PLN03210 Resistant to P. syrin 98.8 1.3E-08 2.7E-13 122.0 10.3 65 59-128 627-691 (1153)
473 PF13855 LRR_8: Leucine rich r 98.8 3.4E-09 7.4E-14 79.9 3.5 60 70-130 2-61 (61)
474 COG4886 Leucine-rich repeat (L 98.8 3.9E-09 8.4E-14 112.3 4.7 143 69-216 116-261 (394)
475 PF01163 RIO1: RIO1 family; I 98.8 4.8E-08 1E-12 91.3 11.3 126 349-489 1-157 (188)
476 COG4248 Uncharacterized protei 98.8 2.2E-07 4.9E-12 93.5 15.5 262 339-610 16-303 (637)
477 COG4886 Leucine-rich repeat (L 98.7 5.6E-09 1.2E-13 111.0 3.4 141 70-216 141-283 (394)
478 KOG3741 Poly(A) ribonuclease s 98.7 5E-07 1.1E-11 93.4 16.9 169 347-532 289-474 (655)
479 KOG0606 Microtubule-associated 98.7 1E-08 2.2E-13 113.6 4.7 190 340-538 810-1039(1205)
480 cd00116 LRR_RI Leucine-rich re 98.7 2.1E-09 4.6E-14 110.7 -0.7 131 69-200 81-235 (319)
481 cd00116 LRR_RI Leucine-rich re 98.7 2E-09 4.3E-14 111.0 -1.6 147 69-216 51-227 (319)
482 KOG4237 Extracellular matrix p 98.7 8.4E-09 1.8E-13 102.4 2.2 157 63-226 42-207 (498)
483 PF13855 LRR_8: Leucine rich r 98.7 1.2E-08 2.6E-13 76.9 2.4 38 95-132 2-39 (61)
484 COG0478 RIO-like serine/threon 98.6 5.2E-07 1.1E-11 86.7 12.9 137 336-489 93-253 (304)
485 KOG1859 Leucine-rich repeat pr 98.5 1.5E-09 3.3E-14 115.0 -8.1 124 70-199 165-292 (1096)
486 COG0661 AarF Predicted unusual 98.5 7.2E-07 1.6E-11 95.8 11.7 140 340-489 131-316 (517)
487 TIGR02172 Fb_sc_TIGR02172 Fibr 98.5 4.5E-06 9.6E-11 81.1 15.1 140 340-487 7-182 (226)
488 PF06293 Kdo: Lipopolysacchari 98.4 2.9E-06 6.3E-11 81.3 12.6 108 373-488 55-171 (206)
489 KOG2137 Protein kinase [Signal 98.4 6.6E-08 1.4E-12 103.4 1.3 144 442-601 106-263 (700)
490 KOG3207 Beta-tubulin folding c 98.4 1.2E-07 2.5E-12 95.8 2.3 132 67-199 170-314 (505)
491 KOG4579 Leucine-rich repeat (L 98.4 6.7E-08 1.5E-12 82.3 0.0 88 69-159 53-141 (177)
492 PRK09902 hypothetical protein; 98.4 9.9E-06 2.1E-10 76.2 14.2 138 343-488 27-180 (216)
493 KOG3207 Beta-tubulin folding c 98.3 1.7E-07 3.7E-12 94.6 1.1 148 69-216 146-307 (505)
494 KOG4579 Leucine-rich repeat (L 98.3 3.2E-08 7E-13 84.2 -3.6 84 118-203 53-139 (177)
495 PF08263 LRRNT_2: Leucine rich 98.3 1E-06 2.2E-11 60.9 4.3 37 28-65 2-43 (43)
496 KOG0531 Protein phosphatase 1, 98.2 2.4E-07 5.3E-12 98.9 -0.1 125 70-199 73-199 (414)
497 COG1718 RIO1 Serine/threonine 98.2 2.9E-05 6.3E-10 74.1 13.6 137 340-490 54-218 (268)
498 PF12799 LRR_4: Leucine Rich r 98.2 1.1E-06 2.3E-11 60.9 2.1 40 94-134 1-40 (44)
499 KOG0531 Protein phosphatase 1, 98.1 7.2E-07 1.6E-11 95.3 1.4 105 69-178 95-200 (414)
500 cd05150 APH Aminoglycoside 3'- 98.1 3.5E-05 7.6E-10 76.1 13.1 143 341-487 5-193 (244)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=4.2e-60 Score=558.80 Aligned_cols=491 Identities=28% Similarity=0.465 Sum_probs=302.6
Q ss_pred EEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc--cccceeccc
Q 006884 71 VIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNALDLS 148 (627)
Q Consensus 71 v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~--~~L~~L~ls 148 (627)
++.|+|++|++.|.+|. .+ .+++|+.|+|++|++++.+|..|.++++|++|+|++|++.+.+|.... .+|++|+|+
T Consensus 454 L~~L~L~~n~~~~~~p~-~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 531 (968)
T PLN00113 454 LQMLSLARNKFFGGLPD-SF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLS 531 (968)
T ss_pred CcEEECcCceeeeecCc-cc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECC
Confidence 34444444444444433 11 234455555555555555555555555555555555555555443221 245555555
Q ss_pred cccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCCCc--CCCCCCCcccCCCCCCCCC
Q 006884 149 FNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDS--LQTFPNSSFVGNSMLCGLP 224 (627)
Q Consensus 149 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~--~~~~~~l~~~~n~~l~~~~ 224 (627)
+|.++|.+|..|.++++|+.|+|++|+++|.+|.. .+++|+.|++++|+++|.+|.. +..+....+.||+.+|+.+
T Consensus 532 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~ 611 (968)
T PLN00113 532 HNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGD 611 (968)
T ss_pred CCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCc
Confidence 55555555555555555555555555555555542 4555555555555555555532 2333444445555555422
Q ss_pred CCCCCCCCCCCCCCCCCCCcCCCCCcccccccCccceeeeehhhHHHHHHHHHHHHhhhhcccccCCCCcccCCCCCCCC
Q 006884 225 LTPCSTVSSSPSPSPSYFPTISPHKNASRKKLNSGSIIAIAVGGCAVLFLLLALFFLCCLKKLDRQGSGVLKGKGTAEKP 304 (627)
Q Consensus 225 ~~~c~~~~~~~~p~~~~~~~~s~~~~~~~~~~~~~~ii~~~~~~~~~~~~l~~~~~~~~~rr~~~~~~~~~~~~~~~~~~ 304 (627)
... ..++.... ........++++++++ +++++++++++++++||++..........+
T Consensus 612 ~~~----------------~~~~c~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 668 (968)
T PLN00113 612 TTS----------------GLPPCKRV-RKTPSWWFYITCTLGA-FLVLALVAFGFVFIRGRNNLELKRVENEDG----- 668 (968)
T ss_pred ccc----------------CCCCCccc-cccceeeeehhHHHHH-HHHHHHHHHHHHHHHhhhcccccccccccc-----
Confidence 100 00001000 0111111222222222 222222223333333322111110000000
Q ss_pred CCCCCCccccccCceeeec-CCCCCCCHHHHHHHH--hcccCcCCceEEEEEEE-cCCcEEEEEEecccccCHHHHHHHH
Q 006884 305 KDFGSGVQEAEKNKLCFLD-GSYFNFDLEDLLRAS--AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVAATKREFEQQM 380 (627)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~--~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~ 380 (627)
.+ .....+ .....++++++.... .+.||+|+||.||+|+. .++..||||++...... ...|+
T Consensus 669 -~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~ 734 (968)
T PLN00113 669 -TW----------ELQFFDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI---PSSEI 734 (968)
T ss_pred -cc----------cccccccccchhhhHHHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc---cHHHH
Confidence 00 000011 011224455554443 45799999999999996 47899999998654322 23457
Q ss_pred HHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCee
Q 006884 381 EVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFT 460 (627)
Q Consensus 381 ~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iv 460 (627)
+.++++ +||||++++++|.+.+..++||||+++|+|.++++. ++|..+.+++.|+|+||+|||+.+.++|+
T Consensus 735 ~~l~~l-~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~--------l~~~~~~~i~~~ia~~L~yLH~~~~~~ii 805 (968)
T PLN00113 735 ADMGKL-QHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN--------LSWERRRKIAIGIAKALRFLHCRCSPAVV 805 (968)
T ss_pred HHHhhC-CCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc--------CCHHHHHHHHHHHHHHHHHhccCCCCCee
Confidence 888888 999999999999999999999999999999999962 79999999999999999999977556799
Q ss_pred ecCCCCCCeEecCCCCeEEeecccccccCCCCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCC
Q 006884 461 HGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHD 540 (627)
Q Consensus 461 H~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~ 540 (627)
||||||+||+++.++.+++. ||.+..........++++|+|||++.+..++.++|||||||++|||+||+.||+... .
T Consensus 806 H~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~-~ 883 (968)
T PLN00113 806 VGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEF-G 883 (968)
T ss_pred cCCCCHHhEEECCCCceEEE-eccccccccCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCccc-C
Confidence 99999999999999998886 776655444444567899999999999999999999999999999999999996432 2
Q ss_pred CCCCHHHHHHHHhhhcccccccchhhhcC-CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 541 DVVDLPRWVRSVVREEWTAEVFDVELLKY-QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
....+.+|.+...........+|+.+... ....++..++.+++.+||+.+|++||+|+||++.|+++....
T Consensus 884 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~ 955 (968)
T PLN00113 884 VHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSS 955 (968)
T ss_pred CCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence 33456777765544443444455444221 223466778899999999999999999999999999986543
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-53 Score=437.28 Aligned_cols=282 Identities=38% Similarity=0.677 Sum_probs=250.0
Q ss_pred CCCCCCHHHHHHHH-----hcccCcCCceEEEEEEEcCCcEEEEEEecccccC-HHHHHHHHHHHHHhccCCceeceeeE
Q 006884 325 SYFNFDLEDLLRAS-----AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAAT-KREFEQQMEVVGTIGKHSNVVPVRAY 398 (627)
Q Consensus 325 ~~~~~~~~~l~~~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~e~~~l~~l~~h~niv~~~~~ 398 (627)
....|++.|+..|| .+.||+|+||.||+|.+.+|+.||||++...... .++|..|++++.++ +|||+|+++||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l-~H~Nlv~LlGy 139 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRL-RHPNLVKLLGY 139 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcC-CCcCcccEEEE
Confidence 34568999999998 4689999999999999999999999988776554 77899999999999 79999999999
Q ss_pred EeeCC-ceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCe
Q 006884 399 YYSKD-EKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG 477 (627)
Q Consensus 399 ~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ 477 (627)
|.+.+ +.++|||||++|+|.++|+..... .++|..|++||.++|+||+|||+.+.++||||||||+|||+|+++++
T Consensus 140 C~e~~~~~~LVYEym~nGsL~d~L~~~~~~---~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~a 216 (361)
T KOG1187|consen 140 CLEGGEHRLLVYEYMPNGSLEDHLHGKKGE---PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNA 216 (361)
T ss_pred EecCCceEEEEEEccCCCCHHHHhCCCCCC---CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCE
Confidence 99998 499999999999999999865321 78999999999999999999999998899999999999999999999
Q ss_pred EEeecccccccCC-CCC---C-CCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHH
Q 006884 478 CISDVGLAHLINF-PTT---A-TRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSV 552 (627)
Q Consensus 478 ki~DfG~a~~~~~-~~~---~-~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~ 552 (627)
||+|||+|+.... ... . .||.+|+|||+...+..++|+|||||||+|+|++||+.+.+.........+..|....
T Consensus 217 KlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~ 296 (361)
T KOG1187|consen 217 KLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPL 296 (361)
T ss_pred EccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHH
Confidence 9999999977653 322 2 7899999999999999999999999999999999999988865545555699999999
Q ss_pred hhhcccccccchhhhcCCChH-HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 553 VREEWTAEVFDVELLKYQDVE-EEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 553 ~~~~~~~~~~d~~l~~~~~~~-~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
+.+....+++|+.+....... +++..+..++.+|++.+|.+||+|.||+++|+.+...
T Consensus 297 ~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 297 LEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred HHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 999899999999987433333 7888899999999999999999999999999776554
No 3
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-46 Score=384.76 Aligned_cols=261 Identities=31% Similarity=0.484 Sum_probs=212.2
Q ss_pred CCCHHHHHHHHhcccCcCCceEEEEEEEcCCcEEEEEEecccccC---HHHHHHHHHHHHHhccCCceeceeeEEeeCC-
Q 006884 328 NFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAAT---KREFEQQMEVVGTIGKHSNVVPVRAYYYSKD- 403 (627)
Q Consensus 328 ~~~~~~l~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~- 403 (627)
.++..++.. .+.||+|+||+||+|.++....||||++...... .++|.+|+.++.++ +|||||+++|+|.+..
T Consensus 37 ~i~~~~l~~--~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l-~HpNIV~f~G~~~~~~~ 113 (362)
T KOG0192|consen 37 EIDPDELPI--EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRL-RHPNIVQFYGACTSPPG 113 (362)
T ss_pred ecChHHhhh--hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCC
Confidence 344555532 4569999999999999985444999999765432 45899999999999 9999999999999887
Q ss_pred ceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC-CeEEeec
Q 006884 404 EKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL-NGCISDV 482 (627)
Q Consensus 404 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~-~~ki~Df 482 (627)
..++|||||++|+|.++++.. ....+++..++++|.|||+||.|||+++ + ||||||||+|||++.++ ++||+||
T Consensus 114 ~~~iVtEy~~~GsL~~~l~~~---~~~~l~~~~~l~~aldiArGm~YLH~~~-~-iIHrDLK~~NiLv~~~~~~~KI~DF 188 (362)
T KOG0192|consen 114 SLCIVTEYMPGGSLSVLLHKK---RKRKLPLKVRLRIALDIARGMEYLHSEG-P-IIHRDLKSDNILVDLKGKTLKIADF 188 (362)
T ss_pred ceEEEEEeCCCCcHHHHHhhc---ccCCCCHHHHHHHHHHHHHHHHHHhcCC-C-eeecccChhhEEEcCCCCEEEECCC
Confidence 799999999999999999874 1357999999999999999999999987 3 99999999999999997 9999999
Q ss_pred ccccccCC---C-CCCCCCccccCccccC--CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhc
Q 006884 483 GLAHLINF---P-TTATRTIGYRAPEVTE--TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREE 556 (627)
Q Consensus 483 G~a~~~~~---~-~~~~~t~~y~aPE~~~--~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 556 (627)
|+++.... . ....||..|||||++. ...|+.|+|||||||++|||+||+.||..... ......+....
T Consensus 189 Glsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~------~~~~~~v~~~~ 262 (362)
T KOG0192|consen 189 GLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP------VQVASAVVVGG 262 (362)
T ss_pred ccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhcC
Confidence 99987653 2 2357899999999999 56999999999999999999999999986542 11111222222
Q ss_pred ccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006884 557 WTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 557 ~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~ 612 (627)
....+ ...+...+..++.+||..||+.||++.+++..|+.+...-.
T Consensus 263 ~Rp~~----------p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~ 308 (362)
T KOG0192|consen 263 LRPPI----------PKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHIS 308 (362)
T ss_pred CCCCC----------CccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhc
Confidence 11111 11245567778889999999999999999999999876444
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-46 Score=362.23 Aligned_cols=253 Identities=26% Similarity=0.379 Sum_probs=209.0
Q ss_pred CCHHHHHHHHhcccCcCCceEEEEEEEc-CCcEEEEEEeccc--ccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCc-
Q 006884 329 FDLEDLLRASAEVLGKGSYGSTYKAILE-DGTTVVVKRLREV--AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDE- 404 (627)
Q Consensus 329 ~~~~~l~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~- 404 (627)
+...|++ ..+.||+|..|+|||++++ +++.+|+|.+... ....+++.+|++++.+. +||+||.++|.|+.+..
T Consensus 76 i~~~dle--~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~-~spyIV~~ygaF~~~~~~ 152 (364)
T KOG0581|consen 76 ISLSDLE--RLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSC-QSPYIVGFYGAFYSNGEE 152 (364)
T ss_pred cCHHHhh--hhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhC-CCCCeeeEeEEEEeCCce
Confidence 5566663 3588999999999999977 6888999998543 23468899999999999 99999999999999994
Q ss_pred eeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCeEecCCCCeEEeecc
Q 006884 405 KLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS-EGGAKFTHGNIKSSNVLLTQDLNGCISDVG 483 (627)
Q Consensus 405 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG 483 (627)
..++||||++|+|.+++... +.+++...-+|+.+|++||.|||+ ++ ||||||||+|||++..|++||||||
T Consensus 153 isI~mEYMDgGSLd~~~k~~-----g~i~E~~L~~ia~~VL~GL~YLh~~~~---IIHRDIKPsNlLvNskGeVKicDFG 224 (364)
T KOG0581|consen 153 ISICMEYMDGGSLDDILKRV-----GRIPEPVLGKIARAVLRGLSYLHEERK---IIHRDIKPSNLLVNSKGEVKICDFG 224 (364)
T ss_pred EEeehhhcCCCCHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhhccC---eeeccCCHHHeeeccCCCEEecccc
Confidence 99999999999999999864 358999999999999999999996 54 9999999999999999999999999
Q ss_pred cccccCC--CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccc
Q 006884 484 LAHLINF--PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEV 561 (627)
Q Consensus 484 ~a~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (627)
.++.+.. ..+++||..|||||.+.+..|+.++||||||++++|+.+|+.||.... .......+.+..++.+... .
T Consensus 225 VS~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~-~~~~~~~~Ll~~Iv~~ppP-~- 301 (364)
T KOG0581|consen 225 VSGILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPN-PPYLDIFELLCAIVDEPPP-R- 301 (364)
T ss_pred ccHHhhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcC-CCCCCHHHHHHHHhcCCCC-C-
Confidence 9988754 367889999999999999999999999999999999999999998651 2223333333333332211 1
Q ss_pred cchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 562 FDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 562 ~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
+... ....++.+++..|+++||.+||+++|++++
T Consensus 302 ----lP~~----~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 302 ----LPEG----EFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred ----CCcc----cCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 1111 234456677779999999999999999884
No 5
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-46 Score=377.04 Aligned_cols=257 Identities=28% Similarity=0.457 Sum_probs=216.8
Q ss_pred CCHHHHHHHHhcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEE
Q 006884 329 FDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVV 408 (627)
Q Consensus 329 ~~~~~l~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv 408 (627)
++-+++ ...+.||+|-||.||.|.++....||+|.++......+.|.+|+++|.+| +|+|||+++|+|..++..++|
T Consensus 203 i~r~~l--~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L-~H~~lV~l~gV~~~~~piyIV 279 (468)
T KOG0197|consen 203 IPREEL--KLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKL-RHEKLVKLYGVCTKQEPIYIV 279 (468)
T ss_pred ecHHHH--HHHHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhC-cccCeEEEEEEEecCCceEEE
Confidence 444444 45688999999999999999888999999998877889999999999999 999999999999998899999
Q ss_pred EecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 409 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
||||+.|+|.+||+.. ++..+...+.+.++.|||.|++||++++ +|||||.++|||++++..+||+|||+|+..
T Consensus 280 tE~m~~GsLl~yLr~~---~~~~l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~~~vKIsDFGLAr~~ 353 (468)
T KOG0197|consen 280 TEYMPKGSLLDYLRTR---EGGLLNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDEDLVVKISDFGLARLI 353 (468)
T ss_pred EEecccCcHHHHhhhc---CCCccchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccCceEEEccccccccc
Confidence 9999999999999862 3567899999999999999999999998 999999999999999999999999999965
Q ss_pred CCCCCCC-----CCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006884 489 NFPTTAT-----RTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 489 ~~~~~~~-----~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
....... -++.|.|||.+...+++.|+|||||||+||||+| |+.||..+...+ -+..+-+..+
T Consensus 354 ~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e------v~~~le~GyR----- 422 (468)
T KOG0197|consen 354 GDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE------VLELLERGYR----- 422 (468)
T ss_pred CCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH------HHHHHhccCc-----
Confidence 4432211 2457999999999999999999999999999999 889988664332 2222222211
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
+ +..+.+..++.++|..||+.+|++|||++.+...|+++....
T Consensus 423 ---l---p~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~ 465 (468)
T KOG0197|consen 423 ---L---PRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTST 465 (468)
T ss_pred ---C---CCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhcc
Confidence 1 122345567888999999999999999999999999986644
No 6
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=8.3e-45 Score=387.09 Aligned_cols=252 Identities=27% Similarity=0.447 Sum_probs=213.0
Q ss_pred hcccCcCCceEEEEEEEc------CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILE------DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||+||+|+.. +.+.||||.+++... ..++|++|++++..+ +|||||+++|.|.+++..++|+|
T Consensus 491 ~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l-~H~nIVrLlGVC~~~~P~~MvFE 569 (774)
T KOG1026|consen 491 KEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAEL-QHPNIVRLLGVCREGDPLCMVFE 569 (774)
T ss_pred hhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhc-cCCCeEEEEEEEccCCeeEEEEE
Confidence 578999999999999843 356799999987754 467999999999999 99999999999999999999999
Q ss_pred cCCCCcHHHHhhhcCCC-----CC----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEee
Q 006884 411 YMPAGSLFMLLHRNRSD-----GG----TALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISD 481 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~-----~~----~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~D 481 (627)
||..|||.+||...... ++ .+++..+.+.||.|||.|+.||-++. +|||||..+|+|+.++..+||+|
T Consensus 570 Ym~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge~l~VKIsD 646 (774)
T KOG1026|consen 570 YMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGENLVVKISD 646 (774)
T ss_pred ecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhceeccceEEEecc
Confidence 99999999999865322 12 23889999999999999999999987 99999999999999999999999
Q ss_pred cccccccCCCCCCC------CCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhh
Q 006884 482 VGLAHLINFPTTAT------RTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVR 554 (627)
Q Consensus 482 fG~a~~~~~~~~~~------~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~ 554 (627)
||+++..-..+.+. -.++|||||.+..+++++++|||||||+|||+++ |+.||.+...++..+ .++
T Consensus 647 fGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe-------~i~ 719 (774)
T KOG1026|consen 647 FGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIE-------CIR 719 (774)
T ss_pred cccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHH-------HHH
Confidence 99999864433222 2578999999999999999999999999999999 999998876544221 122
Q ss_pred hcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 555 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
.+.. ....+.+..++.+||..||+..|.+||++.||-..|+......
T Consensus 720 ~g~l----------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 720 AGQL----------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred cCCc----------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence 2211 2334567778999999999999999999999999999986554
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.3e-44 Score=366.61 Aligned_cols=238 Identities=24% Similarity=0.423 Sum_probs=203.0
Q ss_pred hcccCcCCceEEEEEEE-cCCcEEEEEEeccc----ccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREV----AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.++||+|||+.||.++. ..|..||+|++.+. ....+...+|+++.+.+ +|||||+++++|++.++.|+|.|+|+
T Consensus 23 g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L-~HpnIV~f~~~FEDs~nVYivLELC~ 101 (592)
T KOG0575|consen 23 GRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSL-KHPNIVQFYHFFEDSNNVYIVLELCH 101 (592)
T ss_pred eeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhc-CCCcEEeeeeEeecCCceEEEEEecC
Confidence 57899999999999997 78999999999763 33567789999999999 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
.++|..++++. .++++.+++.++.||+.||.|||+++ |+|||||-.|++++++.++||+|||+|..+..+
T Consensus 102 ~~sL~el~Krr-----k~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~E 173 (592)
T KOG0575|consen 102 RGSLMELLKRR-----KPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGE 173 (592)
T ss_pred CccHHHHHHhc-----CCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEecccceeeeecCccc
Confidence 99999999854 46999999999999999999999998 999999999999999999999999999988643
Q ss_pred --CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 492 --TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
.+.+|||.|+|||++....++..+||||+||+||-|+.|++||+... +.+-...+...+..
T Consensus 174 rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~------vkety~~Ik~~~Y~----------- 236 (592)
T KOG0575|consen 174 RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT------VKETYNKIKLNEYS----------- 236 (592)
T ss_pred ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch------HHHHHHHHHhcCcc-----------
Confidence 56789999999999999999999999999999999999999998642 22222222222111
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.......+..++|.++|+.+|.+|||+++|+.+
T Consensus 237 -~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 237 -MPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred -cccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 111122344567889999999999999999873
No 8
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.3e-44 Score=348.01 Aligned_cols=243 Identities=24% Similarity=0.406 Sum_probs=196.6
Q ss_pred hcccCcCCceEEEEEEE-cCCcEEEEEEeccccc--------CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEE
Q 006884 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVAA--------TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 409 (627)
.+.||+|+||.|-+|.. ++|+.||||++.+... ......+|+++|+++ +|||||++.++|...+..|+|+
T Consensus 177 ~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL-~HP~IV~~~d~f~~~ds~YmVl 255 (475)
T KOG0615|consen 177 SKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKL-SHPNIVRIKDFFEVPDSSYMVL 255 (475)
T ss_pred eeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhc-CCCCEEEEeeeeecCCceEEEE
Confidence 57899999999999995 4799999999965421 233467999999999 9999999999999999999999
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC---CCeEEeeccccc
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD---LNGCISDVGLAH 486 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~---~~~ki~DfG~a~ 486 (627)
||++||+|.+++-.++ .+.+..-..++.|++.|+.|||++| |+||||||+|||+..+ ..+||+|||+|+
T Consensus 256 E~v~GGeLfd~vv~nk-----~l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llKItDFGlAK 327 (475)
T KOG0615|consen 256 EYVEGGELFDKVVANK-----YLREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLKITDFGLAK 327 (475)
T ss_pred EEecCccHHHHHHhcc-----ccccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEEecccchhh
Confidence 9999999999998764 4777778899999999999999999 9999999999999876 788999999999
Q ss_pred ccCC---CCCCCCCccccCccccCCCCC---CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccc
Q 006884 487 LINF---PTTATRTIGYRAPEVTETRKA---SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAE 560 (627)
Q Consensus 487 ~~~~---~~~~~~t~~y~aPE~~~~~~~---~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (627)
..+. ..+.+||+.|.|||++.+..+ ..++|+||+||+||-+++|.+||.+...+. .+ ..++.... ...
T Consensus 328 ~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~--sl---~eQI~~G~-y~f 401 (475)
T KOG0615|consen 328 VSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP--SL---KEQILKGR-YAF 401 (475)
T ss_pred ccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc--cH---HHHHhcCc-ccc
Confidence 8854 357789999999999976543 347899999999999999999998654332 11 12222211 111
Q ss_pred ccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 561 VFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 561 ~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
- .....+...+.+++|.+||..||++|||+.|++++
T Consensus 402 --~-----p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 402 --G-----PLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred --c-----ChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 0 11223344566778889999999999999999873
No 9
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-43 Score=342.17 Aligned_cols=190 Identities=25% Similarity=0.395 Sum_probs=171.8
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
+.||+|+||+||+|+++ ++..||||.+.... ...+-...|+++++.+ +|||||.+++++..++..++|||||.||
T Consensus 16 ~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel-~H~nIV~l~d~~~~~~~i~lVMEyC~gG 94 (429)
T KOG0595|consen 16 REIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKEL-KHPNIVRLLDCIEDDDFIYLVMEYCNGG 94 (429)
T ss_pred hhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhc-CCcceeeEEEEEecCCeEEEEEEeCCCC
Confidence 45999999999999966 68999999986553 2345578999999999 8999999999999999999999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC------CCeEEeecccccccC
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD------LNGCISDVGLAHLIN 489 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~------~~~ki~DfG~a~~~~ 489 (627)
+|.+|+++.+ .+++...+.++.|+|.||++||+++ ||||||||+|||++.+ -.+||+|||+|+.+.
T Consensus 95 DLs~yi~~~~-----~l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~ 166 (429)
T KOG0595|consen 95 DLSDYIRRRG-----RLPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQ 166 (429)
T ss_pred CHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCCCCCCceEEecccchhhhCC
Confidence 9999999753 5999999999999999999999998 9999999999999875 457999999999987
Q ss_pred CC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 006884 490 FP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSG 538 (627)
Q Consensus 490 ~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~ 538 (627)
.. .+.+|++-|||||++...+|+.|+|+||+|+++|+|++|+.||+..+
T Consensus 167 ~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t 218 (429)
T KOG0595|consen 167 PGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET 218 (429)
T ss_pred chhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC
Confidence 54 46679999999999999999999999999999999999999998543
No 10
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-42 Score=322.64 Aligned_cols=247 Identities=23% Similarity=0.346 Sum_probs=200.8
Q ss_pred HhcccCcCCceEEEEEE-EcCCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceee-EEeeCCc-eeEEEec
Q 006884 338 SAEVLGKGSYGSTYKAI-LEDGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRA-YYYSKDE-KLVVYSY 411 (627)
Q Consensus 338 ~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~-~~~~~~~-~~lv~e~ 411 (627)
+.++||+|.||+||++. ..+|..||.|.++-.. ...+....|+.+++.| +|||||++++ .+.++.+ .++||||
T Consensus 23 Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL-~HpNIVqYy~~~f~~~~evlnivmE~ 101 (375)
T KOG0591|consen 23 ILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQL-NHPNIVQYYAHSFIEDNEVLNIVMEL 101 (375)
T ss_pred HHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhc-CCchHHHHHHHhhhccchhhHHHHHh
Confidence 35789999999999998 5689999999987442 2345688899999999 9999999998 4445555 7899999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCeeecCCCCCCeEecCCCCeEEeecccccccCC
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG-AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF 490 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~-~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 490 (627)
+..|+|...++..+. +.+.+++..+++++.|+++||..+|+.-. ..|+||||||.||+++++|.+|++|||+++++..
T Consensus 102 c~~GDLsqmIk~~K~-qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s 180 (375)
T KOG0591|consen 102 CDAGDLSQMIKHFKK-QKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSS 180 (375)
T ss_pred hcccCHHHHHHHHHh-ccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcc
Confidence 999999999987654 35789999999999999999999999431 1399999999999999999999999999999876
Q ss_pred CC----CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhh
Q 006884 491 PT----TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVEL 566 (627)
Q Consensus 491 ~~----~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 566 (627)
.. +.+|||.||+||.+.+..|+.|+||||+||++|||+.-++||.+. ++.+....+.+.+ .....
T Consensus 181 ~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~------n~~~L~~KI~qgd-~~~~p---- 249 (375)
T KOG0591|consen 181 KTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD------NLLSLCKKIEQGD-YPPLP---- 249 (375)
T ss_pred hhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc------cHHHHHHHHHcCC-CCCCc----
Confidence 53 457999999999999999999999999999999999999999875 3333333333332 11111
Q ss_pred hcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 567 LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 567 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.+-....+..|+..|+..||+.||+.-.++.
T Consensus 250 -----~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~ 280 (375)
T KOG0591|consen 250 -----DEHYSTDLRELINMCIAVDPEQRPDTVPYVQ 280 (375)
T ss_pred -----HHHhhhHHHHHHHHHccCCcccCCCcchHHH
Confidence 1334556778889999999999998544333
No 11
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-42 Score=333.07 Aligned_cols=238 Identities=23% Similarity=0.369 Sum_probs=197.3
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.++||+|+||+||.++.+ .++.+|+|++++... ..+...+|..++..+ +||.||.+...|++.+.+|+|+||+.
T Consensus 30 lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v-~hPFiv~l~ysFQt~~kLylVld~~~ 108 (357)
T KOG0598|consen 30 LKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKI-KHPFIVKLIYSFQTEEKLYLVLDYLN 108 (357)
T ss_pred eeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhC-CCCcEeeeEEecccCCeEEEEEeccC
Confidence 588999999999999966 588999999986532 346788899999998 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC----
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN---- 489 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~---- 489 (627)
||.|..+|++. ..+++..+.-.+..|+.||.|||+++ ||||||||+|||+|.+|+++|+|||+++..-
T Consensus 109 GGeLf~hL~~e-----g~F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~ 180 (357)
T KOG0598|consen 109 GGELFYHLQRE-----GRFSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGD 180 (357)
T ss_pred CccHHHHHHhc-----CCcchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccccchhcccCCC
Confidence 99999999865 35899999999999999999999999 9999999999999999999999999998542
Q ss_pred CCCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 490 FPTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 490 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
...+.+||+.|||||++.+..|+..+|+||+|+++|||++|.+||...+ ..++.+.+....... ..
T Consensus 181 ~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~------~~~~~~~I~~~k~~~--------~p 246 (357)
T KOG0598|consen 181 ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED------VKKMYDKILKGKLPL--------PP 246 (357)
T ss_pred ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc------HHHHHHHHhcCcCCC--------CC
Confidence 2345689999999999999999999999999999999999999998653 334444444433110 01
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCC----CHHHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRP----KMDDVVR 602 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RP----s~~ev~~ 602 (627)
....++ ..+++.+.++.+|++|- .+++|.+
T Consensus 247 ~~ls~~---ardll~~LL~rdp~~RLg~~~d~~~ik~ 280 (357)
T KOG0598|consen 247 GYLSEE---ARDLLKKLLKRDPRQRLGGPGDAEEIKR 280 (357)
T ss_pred ccCCHH---HHHHHHHHhccCHHHhcCCCCChHHhhc
Confidence 112333 34566688899999994 5555443
No 12
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-41 Score=335.77 Aligned_cols=260 Identities=28% Similarity=0.386 Sum_probs=200.4
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhc-cCCceeceeeEEeeCC----ceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG-KHSNVVPVRAYYYSKD----EKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~-~h~niv~~~~~~~~~~----~~~lv~e~~~ 413 (627)
.++||+|+||.||||.+. ++.||||++.. ..++.|..|-+++.... +|+||++++++-.... ++++|++|.+
T Consensus 215 ~eli~~Grfg~V~KaqL~-~~~VAVKifp~--~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~ 291 (534)
T KOG3653|consen 215 LELIGRGRFGCVWKAQLD-NRLVAVKIFPE--QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHP 291 (534)
T ss_pred HHHhhcCccceeehhhcc-CceeEEEecCH--HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeecc
Confidence 367999999999999997 59999999964 34667888887776543 8999999999876655 7899999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC------CCCeeecCCCCCCeEecCCCCeEEeecccccc
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEG------GAKFTHGNIKSSNVLLTQDLNGCISDVGLAHL 487 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~ 487 (627)
.|+|.+||+.+ .++|....+|+..+++||+|||+.. +|+|+|||||++|||+..|+.+.|+|||+|..
T Consensus 292 kGsL~dyL~~n------tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~ 365 (534)
T KOG3653|consen 292 KGSLCDYLKAN------TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALR 365 (534)
T ss_pred CCcHHHHHHhc------cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEE
Confidence 99999999875 5999999999999999999999863 57899999999999999999999999999987
Q ss_pred cCCC------CCCCCCccccCccccCCCCC------CCcchhHHHHHHHHHHHhCCCCCCC--------CCCCC---CCC
Q 006884 488 INFP------TTATRTIGYRAPEVTETRKA------SQKSDVYSFGVLLLEMLTGKAPLQH--------SGHDD---VVD 544 (627)
Q Consensus 488 ~~~~------~~~~~t~~y~aPE~~~~~~~------~~~~Dv~S~Gvvl~el~tg~~pf~~--------~~~~~---~~~ 544 (627)
+... ...+||.+|||||++.+.-- -.+.||||+|.|||||+++..-++. ..+.+ ...
T Consensus 366 ~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt 445 (534)
T KOG3653|consen 366 LEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPT 445 (534)
T ss_pred ecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCC
Confidence 7532 23568999999999976422 2468999999999999996543321 11100 112
Q ss_pred HHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006884 545 LPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~ 612 (627)
+.+.-..++++.....+.+ .......+..+.+.+..||+.||+.|-|+.=+.+.+.++....-
T Consensus 446 ~e~mq~~VV~kK~RP~~p~-----~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 446 LEEMQELVVRKKQRPKIPD-----AWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred HHHHHHHHHhhccCCCChh-----hhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 2222222333332222221 11112456678889999999999999999999999999865543
No 13
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-42 Score=359.02 Aligned_cols=246 Identities=23% Similarity=0.456 Sum_probs=210.3
Q ss_pred hcccCcCCceEEEEEEEc----CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAILE----DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 412 (627)
.++||.|.||.||+|+++ ....||||.++... ....+|..|+.||..+ .||||+++.|........++|+|||
T Consensus 634 e~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQF-dHPNIIrLEGVVTks~PvMIiTEyM 712 (996)
T KOG0196|consen 634 EKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQF-DHPNIIRLEGVVTKSKPVMIITEYM 712 (996)
T ss_pred EEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccC-CCCcEEEEEEEEecCceeEEEhhhh
Confidence 678999999999999976 24579999998763 3567899999999999 9999999999999999999999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT 492 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~ 492 (627)
++|+|..||+.+. ..+.+.+...++.+||.|++||.+++ +|||||.++|||++.+..+||+|||+++.+.+..
T Consensus 713 ENGsLDsFLR~~D----GqftviQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~ 785 (996)
T KOG0196|consen 713 ENGSLDSFLRQND----GQFTVIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 785 (996)
T ss_pred hCCcHHHHHhhcC----CceEeehHHHHHHHHHHHhHHHhhcC---chhhhhhhhheeeccceEEEeccccceeecccCC
Confidence 9999999999764 45999999999999999999999998 9999999999999999999999999999885543
Q ss_pred CC----CC---CccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006884 493 TA----TR---TIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 493 ~~----~~---t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
.. .| +++|.|||.+..++++.++|||||||+|||.++ |.+||.++...+.. ..+..+..
T Consensus 786 ~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVI------kaIe~gyR------- 852 (996)
T KOG0196|consen 786 EAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI------KAIEQGYR------- 852 (996)
T ss_pred CccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHH------HHHHhccC-------
Confidence 21 12 468999999999999999999999999999888 99999877654321 11111111
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006884 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 609 (627)
.+...++...+.+||..||++|-.+||.+.+|+..|+++..
T Consensus 853 ----LPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 853 ----LPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR 893 (996)
T ss_pred ----CCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence 12234567788999999999999999999999999999853
No 14
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-41 Score=345.57 Aligned_cols=265 Identities=25% Similarity=0.415 Sum_probs=208.5
Q ss_pred CCCCHHHHHHHHhcccCcCCceEEEEEEEcCCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCC
Q 006884 327 FNFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD 403 (627)
Q Consensus 327 ~~~~~~~l~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~ 403 (627)
..+.++|+ ...+.||+|.||+||+|++. ..||||++..... ..+.|+.|+..+++= +|.||+-+.|||..+.
T Consensus 387 WeIp~~ev--~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkT-RH~NIlLFMG~~~~p~ 461 (678)
T KOG0193|consen 387 WEIPPEEV--LLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKT-RHENILLFMGACMNPP 461 (678)
T ss_pred cccCHHHh--hccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhc-chhhheeeehhhcCCc
Confidence 34445555 44689999999999999987 3699999976533 356799999999998 9999999999998877
Q ss_pred ceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecc
Q 006884 404 EKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVG 483 (627)
Q Consensus 404 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG 483 (627)
. .+|+.+|+|-+|+.+++..+ ..++....+.||.|||+|+.|||.++ |||||||..||++.+++++||+|||
T Consensus 462 ~-AIiTqwCeGsSLY~hlHv~e----tkfdm~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~~~kVkIgDFG 533 (678)
T KOG0193|consen 462 L-AIITQWCEGSSLYTHLHVQE----TKFDMNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHEDLKVKIGDFG 533 (678)
T ss_pred e-eeeehhccCchhhhhccchh----hhhhHHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEccCCcEEEeccc
Confidence 7 99999999999999998654 45888999999999999999999998 9999999999999999999999999
Q ss_pred cccccCC------CCCCCCCccccCccccC---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhh
Q 006884 484 LAHLINF------PTTATRTIGYRAPEVTE---TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVR 554 (627)
Q Consensus 484 ~a~~~~~------~~~~~~t~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 554 (627)
++..-.. -....+...|||||++. ..+|++.+||||||+|+|||++|..||.....+.+.- .+-+
T Consensus 534 Latvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIif------mVGr 607 (678)
T KOG0193|consen 534 LATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIF------MVGR 607 (678)
T ss_pred ceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEE------Eecc
Confidence 9865422 12334667899999985 3578999999999999999999999998433222111 1111
Q ss_pred hcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc--cccccCCC
Q 006884 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ--PELRNRAS 617 (627)
Q Consensus 555 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~--~~~~~~~~ 617 (627)
... ..|. . .....+.+++.+|+..||+.++++||.+.+|+..|+++.. +.+..+.+
T Consensus 608 G~l---~pd~-s---~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~pki~RS~S 665 (678)
T KOG0193|consen 608 GYL---MPDL-S---KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSLPKINRSAS 665 (678)
T ss_pred ccc---Cccc-h---hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcccccccCcC
Confidence 110 1111 1 1123445567778889999999999999999999999877 44544443
No 15
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.4e-41 Score=318.39 Aligned_cols=255 Identities=22% Similarity=0.325 Sum_probs=196.9
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccC---HHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAAT---KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
..++|+|+||+|||++.+ +|+.||||++.+...+ ++-.++|+++++.+ +|+|+|.++..|......++|+||++.
T Consensus 7 LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqL-kH~NLVnLiEVFrrkrklhLVFE~~dh 85 (396)
T KOG0593|consen 7 LGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQL-KHENLVNLIEVFRRKRKLHLVFEYCDH 85 (396)
T ss_pred hhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhc-ccchHHHHHHHHHhcceeEEEeeecch
Confidence 367999999999999977 5999999999876442 46678999999999 999999999999999999999999977
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
++.+-|.+.. ..++.....+++.|++.|+.|+|+++ +|||||||+|||++.++.+||||||+|+.+..+
T Consensus 86 -TvL~eLe~~p----~G~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~ 157 (396)
T KOG0593|consen 86 -TVLHELERYP----NGVPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDN 157 (396)
T ss_pred -HHHHHHHhcc----CCCCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHhhcCCcch
Confidence 5656666553 35888999999999999999999998 999999999999999999999999999998643
Q ss_pred -CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCC-HHHHHH-------HHhhh-ccccc
Q 006884 492 -TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVD-LPRWVR-------SVVRE-EWTAE 560 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~-~~~~~~-------~~~~~-~~~~~ 560 (627)
+.++.|.+|.|||.+.+ .+|...+||||+||++.||++|.+-|.+...-|... +..-+. +++.. .....
T Consensus 158 YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~G 237 (396)
T KOG0593|consen 158 YTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHG 237 (396)
T ss_pred hhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceee
Confidence 23457899999999877 789999999999999999999999887654222111 000000 01100 00000
Q ss_pred ccchhhhcC----CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 561 VFDVELLKY----QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 561 ~~d~~l~~~----~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
+.-+..... ...+.....+++++..|++.||++|++.+|++.
T Consensus 238 v~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 238 VRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred eecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 000000000 011222335788999999999999999999986
No 16
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-41 Score=339.65 Aligned_cols=239 Identities=21% Similarity=0.361 Sum_probs=197.6
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+|++||+|+.+ .++.||||++.+... ..+-+..|-+.|..|.+||.|++++..|.+...+|+|+||++
T Consensus 78 g~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~ 157 (604)
T KOG0592|consen 78 GKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAP 157 (604)
T ss_pred hheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecC
Confidence 467999999999999955 689999999865422 223466788889999999999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|.+++++. +.+++...+..+.+|+.||+|||+.| ||||||||+|||+|+|+++||+|||.|+.+...
T Consensus 158 nGdll~~i~K~-----Gsfde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~ 229 (604)
T KOG0592|consen 158 NGDLLDLIKKY-----GSFDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIKITDFGSAKILSPSQK 229 (604)
T ss_pred CCcHHHHHHHh-----CcchHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEEEeeccccccCChhhc
Confidence 99999999976 35999999999999999999999999 999999999999999999999999999876321
Q ss_pred ---------------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhc
Q 006884 492 ---------------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREE 556 (627)
Q Consensus 492 ---------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 556 (627)
.+++||..|.+||++.....++.+|+|+|||++|+|+.|++||.+.++.-. +.
T Consensus 230 ~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyli------Fq------ 297 (604)
T KOG0592|consen 230 SQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLI------FQ------ 297 (604)
T ss_pred cccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHH------HH------
Confidence 236689999999999999999999999999999999999999987543211 11
Q ss_pred ccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 557 WTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 557 ~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
++++....-.++.++ .+.+|+.+.|..||.+|+|.++|.++
T Consensus 298 ---kI~~l~y~fp~~fp~---~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 298 ---KIQALDYEFPEGFPE---DARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred ---HHHHhcccCCCCCCH---HHHHHHHHHHccCccccccHHHHhhC
Confidence 111111112223333 34556678889999999999999763
No 17
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=3.3e-40 Score=334.34 Aligned_cols=257 Identities=16% Similarity=0.301 Sum_probs=206.0
Q ss_pred CCCCHHHHHHHHhcccCcCCceEEEEEEEcCCcEEEEEEecccccC----HHHHHHHHHHHHHhccCCceeceeeEEee-
Q 006884 327 FNFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAAT----KREFEQQMEVVGTIGKHSNVVPVRAYYYS- 401 (627)
Q Consensus 327 ~~~~~~~l~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~e~~~l~~l~~h~niv~~~~~~~~- 401 (627)
..++.+|+.......||+|++|.||+|.+ +|+.||||+++..... .+.+.+|++++.++ +||||+++++++.+
T Consensus 13 ~~i~~~~i~~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~g~~~~~ 90 (283)
T PHA02988 13 KCIESDDIDKYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRI-DSNNILKIYGFIIDI 90 (283)
T ss_pred eecCHHHcCCCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhc-CCCCEEEEeeeEEec
Confidence 44566666555456799999999999998 4889999999765333 35678999999999 99999999999876
Q ss_pred ---CCceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCCeEecCCCCe
Q 006884 402 ---KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE-GGAKFTHGNIKSSNVLLTQDLNG 477 (627)
Q Consensus 402 ---~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dlkp~NILl~~~~~~ 477 (627)
....++||||+++|+|.+++... ..++|....+++.+++.||.|||+. + ++||||||+||++++++.+
T Consensus 91 ~~~~~~~~lv~Ey~~~g~L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~---~~Hrdlkp~nill~~~~~~ 162 (283)
T PHA02988 91 VDDLPRLSLILEYCTRGYLREVLDKE-----KDLSFKTKLDMAIDCCKGLYNLYKYTN---KPYKNLTSVSFLVTENYKL 162 (283)
T ss_pred ccCCCceEEEEEeCCCCcHHHHHhhC-----CCCChhHHHHHHHHHHHHHHHHHhcCC---CCCCcCChhhEEECCCCcE
Confidence 34678999999999999999754 3588999999999999999999985 5 7899999999999999999
Q ss_pred EEeecccccccCCC-CCCCCCccccCccccCC--CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhh
Q 006884 478 CISDVGLAHLINFP-TTATRTIGYRAPEVTET--RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVR 554 (627)
Q Consensus 478 ki~DfG~a~~~~~~-~~~~~t~~y~aPE~~~~--~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 554 (627)
||+|||+++..... ....++..|+|||++.+ ..++.++|||||||++|||++|+.||..... ......+..
T Consensus 163 kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~------~~~~~~i~~ 236 (283)
T PHA02988 163 KIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT------KEIYDLIIN 236 (283)
T ss_pred EEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH------HHHHHHHHh
Confidence 99999999865443 33457889999999976 6889999999999999999999999985432 122222221
Q ss_pred hcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006884 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 555 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 609 (627)
...... + . ......+.+++.+||+.||++|||++|+++.|++++.
T Consensus 237 ~~~~~~-~------~---~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 237 KNNSLK-L------P---LDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred cCCCCC-C------C---CcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 111100 0 0 1223456778889999999999999999999998764
No 18
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-41 Score=337.03 Aligned_cols=250 Identities=23% Similarity=0.399 Sum_probs=203.0
Q ss_pred CCCCHHHHHHHHhcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCcee
Q 006884 327 FNFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKL 406 (627)
Q Consensus 327 ~~~~~~~l~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~ 406 (627)
+.+.++++.. .+-||+|+.|.||.|+++ ++.||||+++.. -+.+++-+++| +|+||+.+.|.|.....++
T Consensus 119 WeiPFe~IsE--LeWlGSGaQGAVF~Grl~-netVAVKKV~el------kETdIKHLRkL-kH~NII~FkGVCtqsPcyC 188 (904)
T KOG4721|consen 119 WEIPFEEISE--LEWLGSGAQGAVFLGRLH-NETVAVKKVREL------KETDIKHLRKL-KHPNIITFKGVCTQSPCYC 188 (904)
T ss_pred ccCCHHHhhh--hhhhccCcccceeeeecc-CceehhHHHhhh------hhhhHHHHHhc-cCcceeeEeeeecCCceeE
Confidence 3445555522 367999999999999998 689999988642 24567778888 9999999999999999999
Q ss_pred EEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccc
Q 006884 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH 486 (627)
Q Consensus 407 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 486 (627)
+|||||..|-|...|+.. +.+.-...+.+..+||.|+.|||.+. |||||||+-||||..+..+||+|||-++
T Consensus 189 IiMEfCa~GqL~~VLka~-----~~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~~d~VKIsDFGTS~ 260 (904)
T KOG4721|consen 189 IIMEFCAQGQLYEVLKAG-----RPITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISYDDVVKISDFGTSK 260 (904)
T ss_pred EeeeccccccHHHHHhcc-----CccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeeccceEEeccccchH
Confidence 999999999999999864 45778888999999999999999987 9999999999999999999999999998
Q ss_pred ccCCC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006884 487 LINFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 487 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
..... ..+.||..|||||++...+.++|+||||||||||||+||..||..-+..-+. .. +.
T Consensus 261 e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAII----------wG------VG 324 (904)
T KOG4721|consen 261 ELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAII----------WG------VG 324 (904)
T ss_pred hhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeE----------Ee------cc
Confidence 77554 3467999999999999999999999999999999999999999754322110 00 00
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 564 VELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
.+.....-...+..-|.-|++.||+..|..||++.+++.+|+-....
T Consensus 325 sNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pe 371 (904)
T KOG4721|consen 325 SNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPE 371 (904)
T ss_pred CCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHH
Confidence 11111222334445556678899999999999999999999866543
No 19
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-41 Score=368.74 Aligned_cols=258 Identities=26% Similarity=0.440 Sum_probs=212.3
Q ss_pred hcccCcCCceEEEEEEEcC--Cc----EEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILED--GT----TVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~--~~----~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||.|...+ +. .||||.++... ....+|.+|..+|+.+ +||||++++|.|.+....++++|
T Consensus 697 ~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f-~HpNiv~liGv~l~~~~~~i~le 775 (1025)
T KOG1095|consen 697 LRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKF-DHPNIVSLIGVCLDSGPPLILLE 775 (1025)
T ss_pred eeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcC-CCcceeeEEEeecCCCCcEEEeh
Confidence 5789999999999999653 33 49999998763 4567899999999999 99999999999999999999999
Q ss_pred cCCCCcHHHHhhhcCCCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 411 YMPAGSLFMLLHRNRSDG--GTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~--~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
||++|+|..||++.+... ...++....+.++.|||+|+.||++++ +|||||.++|+|++....+||+|||+|+.+
T Consensus 776 yM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKIaDFGlArDi 852 (1025)
T KOG1095|consen 776 YMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKIADFGLARDI 852 (1025)
T ss_pred hcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEEcccchhHhh
Confidence 999999999999764322 456888999999999999999999998 999999999999999999999999999955
Q ss_pred CCCCCC------CCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccc
Q 006884 489 NFPTTA------TRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEV 561 (627)
Q Consensus 489 ~~~~~~------~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (627)
.....+ .-...|||||.+.++.++.|+|||||||+|||++| |..||......+... .+...+
T Consensus 853 y~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~------~~~~gg----- 921 (1025)
T KOG1095|consen 853 YDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLL------DVLEGG----- 921 (1025)
T ss_pred hhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHH------HHHhCC-----
Confidence 332211 22468999999999999999999999999999999 889998765433211 112222
Q ss_pred cchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccccccCCC
Q 006884 562 FDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRNRAS 617 (627)
Q Consensus 562 ~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~~~~~~ 617 (627)
++ ...+.+...+.++|..||+.+|++||++..+++.+.++.+.-......
T Consensus 922 ---RL---~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~~~~~ 971 (1025)
T KOG1095|consen 922 ---RL---DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALGTIYG 971 (1025)
T ss_pred ---cc---CCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhccCccc
Confidence 11 222445557789999999999999999999999999988776654443
No 20
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=9.4e-40 Score=340.13 Aligned_cols=252 Identities=26% Similarity=0.404 Sum_probs=197.8
Q ss_pred hcccCcCCceEEEEEEE------cCCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCC-ceeEEE
Q 006884 339 AEVLGKGSYGSTYKAIL------EDGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD-EKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~-~~~lv~ 409 (627)
.+.||+|+||.||+|.. .++..||+|+++.... ..+.+.+|++++..+.+||||+++++++...+ ..++||
T Consensus 12 ~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ 91 (338)
T cd05102 12 GKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIV 91 (338)
T ss_pred eeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEE
Confidence 57899999999999974 2356899999875432 24568899999999988999999999887654 578999
Q ss_pred ecCCCCcHHHHhhhcCCC---------------------------------------------------------CCCCC
Q 006884 410 SYMPAGSLFMLLHRNRSD---------------------------------------------------------GGTAL 432 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~---------------------------------------------------------~~~~l 432 (627)
||+++|+|.+++...+.. ....+
T Consensus 92 ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 171 (338)
T cd05102 92 EFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPL 171 (338)
T ss_pred ecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCCC
Confidence 999999999999753210 01357
Q ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC------CCCCCccccCcccc
Q 006884 433 DWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT------TATRTIGYRAPEVT 506 (627)
Q Consensus 433 ~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~------~~~~t~~y~aPE~~ 506 (627)
++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++...... ...++..|+|||++
T Consensus 172 ~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~ 248 (338)
T cd05102 172 TMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESI 248 (338)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHh
Confidence 88899999999999999999998 9999999999999999999999999998653221 22345789999999
Q ss_pred CCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHH
Q 006884 507 ETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALS 585 (627)
Q Consensus 507 ~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~ 585 (627)
.+..++.++||||||+++|||++ |..||......+ . ............ ........+.+++.+
T Consensus 249 ~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~-----~-~~~~~~~~~~~~----------~~~~~~~~l~~li~~ 312 (338)
T cd05102 249 FDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE-----E-FCQRLKDGTRMR----------APENATPEIYRIMLA 312 (338)
T ss_pred hcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH-----H-HHHHHhcCCCCC----------CCCCCCHHHHHHHHH
Confidence 99899999999999999999997 999997643211 1 111111111100 011223457789999
Q ss_pred cccCCCCCCCCHHHHHHHHHhhcc
Q 006884 586 CVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 586 Cl~~~P~~RPs~~ev~~~L~~~~~ 609 (627)
||+.+|++|||+.|+++.|+++..
T Consensus 313 cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 313 CWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HccCChhhCcCHHHHHHHHHHHHh
Confidence 999999999999999999998865
No 21
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-40 Score=324.69 Aligned_cols=249 Identities=27% Similarity=0.444 Sum_probs=196.6
Q ss_pred HhcccCcCCceEEEEEEEc-CCcEEEEEEeccccc-CHHHHHHHHHHHHHhccCCceeceeeEEeeCC--ceeEEEecCC
Q 006884 338 SAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA-TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD--EKLVVYSYMP 413 (627)
Q Consensus 338 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~--~~~lv~e~~~ 413 (627)
..+.||+|+||.||++... +|...|||.+..... ..+.+++|+.++.++ +|||||+++|.....+ .+++.|||++
T Consensus 21 ~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l-~~p~IV~~~G~~~~~~~~~~~i~mEy~~ 99 (313)
T KOG0198|consen 21 KGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRL-NHPNIVQYYGSSSSRENDEYNIFMEYAP 99 (313)
T ss_pred hhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhC-CCCCEEeeCCccccccCeeeEeeeeccC
Confidence 3578999999999999976 489999998865422 246689999999999 6999999999865555 5889999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC-CCCeEEeecccccccCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ-DLNGCISDVGLAHLINF-- 490 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~-~~~~ki~DfG~a~~~~~-- 490 (627)
+|+|.+++.+.. + .+++..++..+.|+++||.|||+++ |+||||||+|||++. ++.+||+|||+++....
T Consensus 100 ~GsL~~~~~~~g---~-~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 100 GGSLSDLIKRYG---G-KLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred CCcHHHHHHHcC---C-CCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence 999999998753 2 6999999999999999999999998 999999999999999 79999999999987652
Q ss_pred -----CCCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006884 491 -----PTTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 491 -----~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
.....||+.|||||++..+ ....++|||||||++.||+||+.||... .....++-.+........+.
T Consensus 173 ~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-----~~~~~~~~~ig~~~~~P~ip-- 245 (313)
T KOG0198|consen 173 TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-----FEEAEALLLIGREDSLPEIP-- 245 (313)
T ss_pred ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-----cchHHHHHHHhccCCCCCCC--
Confidence 2245689999999999853 3345999999999999999999999753 11222222222222111111
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006884 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 609 (627)
...++ +..+++.+|+..+|++||||++++++--...+
T Consensus 246 -----~~ls~---~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~ 282 (313)
T KOG0198|consen 246 -----DSLSD---EAKDFLRKCFKRDPEKRPTAEELLEHPFLKQN 282 (313)
T ss_pred -----cccCH---HHHHHHHHHhhcCcccCcCHHHHhhChhhhcc
Confidence 11223 34556679999999999999999997655443
No 22
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-40 Score=337.09 Aligned_cols=238 Identities=25% Similarity=0.389 Sum_probs=199.0
Q ss_pred cccCcCCceEEEEEEE-cCCcEEEEEEecccccC-HHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 340 EVLGKGSYGSTYKAIL-EDGTTVVVKRLREVAAT-KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
++||+|+.|.||.+.. .+++.||||++...... ++-+..|+.+|+.. +|+|||.++..|..+++.++|||||+||+|
T Consensus 279 ~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~-~H~NiVnfl~Sylv~deLWVVMEym~ggsL 357 (550)
T KOG0578|consen 279 KKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDL-HHPNIVNFLDSYLVGDELWVVMEYMEGGSL 357 (550)
T ss_pred hhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhc-cchHHHHHHHHhcccceeEEEEeecCCCch
Confidence 6799999999999984 46889999999876554 55678899999999 999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC----CCC
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF----PTT 493 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~----~~~ 493 (627)
.+.+... .+++.++..|+.++++||+|||.++ |+|||||.+|||++.+|.+||+|||++..+.. ..+
T Consensus 358 TDvVt~~------~~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~T 428 (550)
T KOG0578|consen 358 TDVVTKT------RMTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRST 428 (550)
T ss_pred hhhhhcc------cccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeeeeccccccCcccc
Confidence 9999865 4899999999999999999999999 99999999999999999999999999987743 346
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChH
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVE 573 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 573 (627)
.+||+.|||||+.....|.+|+||||||++.+||+.|++||-..+ ..+.+..+...+ . +.+ +..+
T Consensus 429 mVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~------PlrAlyLIa~ng-~-----P~l---k~~~ 493 (550)
T KOG0578|consen 429 MVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNEN------PLRALYLIATNG-T-----PKL---KNPE 493 (550)
T ss_pred ccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCC------hHHHHHHHhhcC-C-----CCc---CCcc
Confidence 679999999999999999999999999999999999999986421 111111111111 1 111 1222
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 574 EEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 574 ~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.....+.+++.+||..|+++||++.|+++
T Consensus 494 klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 494 KLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred ccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 23345566777999999999999999998
No 23
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-40 Score=331.35 Aligned_cols=255 Identities=21% Similarity=0.358 Sum_probs=200.8
Q ss_pred HhcccCcCCceEEEEEEE-cCCcEEEEEEecccccCHH--HHHHHHHHHHHhccCCceeceeeEEeeCC-ceeEEEecCC
Q 006884 338 SAEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVAATKR--EFEQQMEVVGTIGKHSNVVPVRAYYYSKD-EKLVVYSYMP 413 (627)
Q Consensus 338 ~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~--~~~~e~~~l~~l~~h~niv~~~~~~~~~~-~~~lv~e~~~ 413 (627)
+.++||.|.||.||+|+. ..|..||||+++......+ .-.+|++.++++..||||+++...+.+.+ .+++|||||+
T Consensus 14 ~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md 93 (538)
T KOG0661|consen 14 VIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMD 93 (538)
T ss_pred HHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhh
Confidence 357899999999999994 4689999999987644333 35679999999966999999999999888 8999999995
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
.+|++.++.. .+.+++..+..|+.||++||+|+|.+| +.|||+||+|||+..+..+||+|||+||.+...
T Consensus 94 -~NLYqLmK~R----~r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpP 165 (538)
T KOG0661|consen 94 -CNLYQLMKDR----NRLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIADFGLAREVRSKPP 165 (538)
T ss_pred -hhHHHHHhhc----CCcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEecccccccccccCCC
Confidence 5999999865 468999999999999999999999999 999999999999999999999999999988543
Q ss_pred -CCCCCCccccCcccc-CCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhh----hcccc-----c
Q 006884 492 -TTATRTIGYRAPEVT-ETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVR----EEWTA-----E 560 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~-~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~-----~ 560 (627)
+.++.|.+|+|||++ ...-|+.+.||||+|||++|+.+-++-|.+.++-| ++-+... ++. +.|.. .
T Consensus 166 YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~D--qi~KIc~-VLGtP~~~~~~eg~~La~ 242 (538)
T KOG0661|consen 166 YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEID--QIYKICE-VLGTPDKDSWPEGYNLAS 242 (538)
T ss_pred cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHH--HHHHHHH-HhCCCccccchhHHHHHH
Confidence 345578999999997 46778999999999999999999999998765432 2111111 111 11110 1
Q ss_pred ccchhhhcCC------ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 561 VFDVELLKYQ------DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 561 ~~d~~l~~~~------~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.+...+.... -.+....+.++++.+|+++||.+||||+|++++
T Consensus 243 ~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 243 AMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 1111111100 112355677889999999999999999999874
No 24
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-40 Score=338.54 Aligned_cols=250 Identities=26% Similarity=0.409 Sum_probs=203.4
Q ss_pred hcccCcCCceEEEEEEEcC--C--cE-EEEEEeccc----ccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEE
Q 006884 339 AEVLGKGSYGSTYKAILED--G--TT-VVVKRLREV----AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~--~--~~-vavK~~~~~----~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 409 (627)
.++||+|+||.||+|.++. + .. ||||..+.. ....++|.+|+++|+.+ +|||||+++|++......++||
T Consensus 162 ~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l-~H~NVVr~yGVa~~~~Pl~ivm 240 (474)
T KOG0194|consen 162 GKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQL-NHPNVVRFYGVAVLEEPLMLVM 240 (474)
T ss_pred cceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEcCCCccEEEE
Confidence 3889999999999999653 2 23 899988752 23467899999999999 9999999999999999999999
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
|+++||+|.++|+++.. .++..++..++.+.|.||+|||+++ ++||||.++|+|++.++.+||+|||+++...
T Consensus 241 El~~gGsL~~~L~k~~~----~v~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~~~vKISDFGLs~~~~ 313 (474)
T KOG0194|consen 241 ELCNGGSLDDYLKKNKK----SLPTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKKGVVKISDFGLSRAGS 313 (474)
T ss_pred EecCCCcHHHHHHhCCC----CCCHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCCCeEEeCccccccCCc
Confidence 99999999999998642 5999999999999999999999998 9999999999999999999999999998764
Q ss_pred CCC----CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006884 490 FPT----TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 490 ~~~----~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
... ...-+..|+|||.+....|++++|||||||++||+++ |..||.+.... .....+...+.....
T Consensus 314 ~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~------~v~~kI~~~~~r~~~--- 384 (474)
T KOG0194|consen 314 QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY------EVKAKIVKNGYRMPI--- 384 (474)
T ss_pred ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH------HHHHHHHhcCccCCC---
Confidence 211 1124578999999999999999999999999999999 88899865422 111122222222211
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006884 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~ 612 (627)
....+ ..+..++.+||..+|++||+|.++.+.|+.+.....
T Consensus 385 ----~~~~p---~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 385 ----PSKTP---KELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred ----CCCCH---HHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 11223 344556669999999999999999999999876544
No 25
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.1e-39 Score=325.08 Aligned_cols=253 Identities=25% Similarity=0.375 Sum_probs=195.2
Q ss_pred hcccCcCCceEEEEEE-EcCCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeC--CceeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAI-LEDGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSK--DEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~--~~~~lv~e~~ 412 (627)
.++||+|.||.||+|+ ..+|+.||+|+++... ..-....+|+.++++| .||||+++.+...+. ...|+|+|||
T Consensus 122 i~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l-~HpNIikL~eivt~~~~~siYlVFeYM 200 (560)
T KOG0600|consen 122 IEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRL-DHPNIIKLEEIVTSKLSGSIYLVFEYM 200 (560)
T ss_pred HHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhc-CCCcccceeeEEEecCCceEEEEEecc
Confidence 4789999999999999 4579999999987543 2345678899999999 999999999999887 6899999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT 492 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~ 492 (627)
+. ||..++... +..++..++..++.|++.||+|+|+++ |+|||||.+|||||.+|.+||+|||+|++.....
T Consensus 201 dh-DL~GLl~~p----~vkft~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~ 272 (560)
T KOG0600|consen 201 DH-DLSGLLSSP----GVKFTEPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG 272 (560)
T ss_pred cc-hhhhhhcCC----CcccChHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEcCCCCEEeccccceeeccCCC
Confidence 87 888887643 356899999999999999999999999 9999999999999999999999999999875433
Q ss_pred -----CCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHH---HHhhhcccc----
Q 006884 493 -----TATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVR---SVVREEWTA---- 559 (627)
Q Consensus 493 -----~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~---~~~~~~~~~---- 559 (627)
..+.|.+|.|||++.+ ..|+..+|+||.||||.||++|++.|++.++-+. +...++ ....+.|..
T Consensus 273 ~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQ--l~kIfklcGSP~e~~W~~~kLP 350 (560)
T KOG0600|consen 273 SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQ--LHKIFKLCGSPTEDYWPVSKLP 350 (560)
T ss_pred CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHH--HHHHHHHhCCCChhccccccCC
Confidence 3346899999999876 4799999999999999999999999997653222 111111 000111110
Q ss_pred --cccchhhhcCCChHHH----HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 560 --EVFDVELLKYQDVEEE----MVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 560 --~~~d~~l~~~~~~~~~----~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
..+.+.-.-.....|. ....++|+..+|..||.+|.|+.++++
T Consensus 351 ~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 351 HATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred cccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 1111100000011111 124567788999999999999999976
No 26
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-39 Score=326.36 Aligned_cols=252 Identities=21% Similarity=0.340 Sum_probs=205.1
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
.++||+|-||.|..+....+..||||.++.... ..++|.+|+++|.++ +||||+.++|.|..++..++|+|||++|+
T Consensus 543 ~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqL-khPNIveLvGVC~~DePicmI~EYmEnGD 621 (807)
T KOG1094|consen 543 KEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRL-KHPNIVELLGVCVQDDPLCMITEYMENGD 621 (807)
T ss_pred hhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhcc-CCCCeeEEEeeeecCCchHHHHHHHhcCc
Confidence 689999999999999998889999999987643 457899999999999 99999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCCCC-
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTAT- 495 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~~~- 495 (627)
|.+|+.++... .+.-....+|+.|||.|++||.+.. +|||||.++|+|++.++++||+|||+++-+-....+.
T Consensus 622 LnqFl~aheap---t~~t~~~vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~v 695 (807)
T KOG1094|consen 622 LNQFLSAHELP---TAETAPGVSICTQIASGMAYLESLN---FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRV 695 (807)
T ss_pred HHHHHHhccCc---ccccchhHHHHHHHHHHHHHHHhhc---hhhccccccceeecCcccEEecCcccccccccCCceee
Confidence 99999876321 1345566789999999999999988 9999999999999999999999999999664433222
Q ss_pred -----CCccccCccccCCCCCCCcchhHHHHHHHHHHHh--CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006884 496 -----RTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT--GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 496 -----~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
-+++|||+|.+.-++++.++|||+||+++||+++ ...||.....++. .+-....+........
T Consensus 696 qgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v---ven~~~~~~~~~~~~~------- 765 (807)
T KOG1094|consen 696 QGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV---VENAGEFFRDQGRQVV------- 765 (807)
T ss_pred ecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH---HHhhhhhcCCCCccee-------
Confidence 3578999999999999999999999999999877 7788876543321 1111111111111110
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006884 569 YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~ 607 (627)
......+...+.+++.+||+.+-++||+++++...|++.
T Consensus 766 l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 766 LSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 112344556788999999999999999999999998864
No 27
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-39 Score=315.86 Aligned_cols=256 Identities=21% Similarity=0.346 Sum_probs=203.3
Q ss_pred hcccCcCCceEEEEEE-EcCCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAI-LEDGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||.|..++||+|+ .+.+..||||++.... ...+.+.+|+..|..+ +||||+.++..|..+..+|+||.||.+|
T Consensus 31 ~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~-~HPNIv~~~~sFvv~~~LWvVmpfMa~G 109 (516)
T KOG0582|consen 31 QEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLI-DHPNIVTYHCSFVVDSELWVVMPFMAGG 109 (516)
T ss_pred EEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhc-CCCCcceEEEEEEecceeEEeehhhcCC
Confidence 5789999999999999 4567999999997543 3357899999999988 9999999999999999999999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~---- 491 (627)
++.+.++....+ .+++..+..|..++++||.|||++| .||||||+.||||+.+|.+||+|||.+..+...
T Consensus 110 S~ldIik~~~~~---Gl~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~ 183 (516)
T KOG0582|consen 110 SLLDIIKTYYPD---GLEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQ 183 (516)
T ss_pred cHHHHHHHHccc---cccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCceeeeeecccCcee
Confidence 999999876543 4899999999999999999999999 999999999999999999999999987554221
Q ss_pred ----CCCCCCccccCccccC--CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccc-c--ccc
Q 006884 492 ----TTATRTIGYRAPEVTE--TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWT-A--EVF 562 (627)
Q Consensus 492 ----~~~~~t~~y~aPE~~~--~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~ 562 (627)
.+..||+.|||||++. ...|+.|+||||||++..||.+|..||.....-. .+-..++.... . ...
T Consensus 184 ~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmk------vLl~tLqn~pp~~~t~~~ 257 (516)
T KOG0582|consen 184 VTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMK------VLLLTLQNDPPTLLTSGL 257 (516)
T ss_pred eEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHH------HHHHHhcCCCCCcccccC
Confidence 4557899999999953 3579999999999999999999999998543211 11111111111 0 011
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHhhccccc
Q 006884 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR--MIEQIQQPEL 612 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~--~L~~~~~~~~ 612 (627)
+.+ ......+.+.+++..|+.+||.+|||++++++ +++..+..+.
T Consensus 258 ~~d-----~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~~~~ 304 (516)
T KOG0582|consen 258 DKD-----EDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKSKEY 304 (516)
T ss_pred ChH-----HhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccchhh
Confidence 111 11122236778888999999999999999997 5666555444
No 28
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.6e-39 Score=299.81 Aligned_cols=255 Identities=24% Similarity=0.391 Sum_probs=200.8
Q ss_pred HhcccCcCCceEEEEEEE-cCCcEEEEEEecccccC---HHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 338 SAEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVAAT---KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 338 ~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
..+.+|+|.||.||+|+. ++|+.||||+++..... .....+|++.++.+ +|+||+.+++.|...+...+|+|||+
T Consensus 6 ~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel-~h~nIi~LiD~F~~~~~l~lVfEfm~ 84 (318)
T KOG0659|consen 6 KLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQEL-KHPNIIELIDVFPHKSNLSLVFEFMP 84 (318)
T ss_pred hhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHc-cCcchhhhhhhccCCCceEEEEEecc
Confidence 357899999999999994 47999999999865432 45688999999999 89999999999999999999999997
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCC
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTT 493 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~ 493 (627)
. +|...++.. ...++-.....++.++++|++|||++. |+||||||.|+|++.+|.+||+|||+|+....+..
T Consensus 85 t-dLe~vIkd~----~i~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~ 156 (318)
T KOG0659|consen 85 T-DLEVVIKDK----NIILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR 156 (318)
T ss_pred c-cHHHHhccc----ccccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccchhccCCCCc
Confidence 6 899998754 357888999999999999999999998 99999999999999999999999999999865432
Q ss_pred ----CCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHh---hhccccc--ccc
Q 006884 494 ----ATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVV---REEWTAE--VFD 563 (627)
Q Consensus 494 ----~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~~--~~d 563 (627)
.+.|.+|.|||.+.| +.|+..+||||.||++.||+-|.+-|.+.+ |..++...++..- .+.|..- ..|
T Consensus 157 ~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~s--DidQL~~If~~LGTP~~~~WP~~~~lpd 234 (318)
T KOG0659|consen 157 IQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDS--DIDQLSKIFRALGTPTPDQWPEMTSLPD 234 (318)
T ss_pred ccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCc--hHHHHHHHHHHcCCCCcccCcccccccc
Confidence 246889999999876 568999999999999999999998887643 2222222222110 1111110 011
Q ss_pred hh-hhcCC------ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 564 VE-LLKYQ------DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 564 ~~-l~~~~------~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.. +...+ -.+.+..+.++++..++..+|.+|+++.|++++
T Consensus 235 Y~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 235 YVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred HHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 10 00001 223344566899999999999999999999875
No 29
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-38 Score=313.27 Aligned_cols=257 Identities=25% Similarity=0.424 Sum_probs=201.6
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhc-cCCceeceeeEEeeCC----ceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG-KHSNVVPVRAYYYSKD----EKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~-~h~niv~~~~~~~~~~----~~~lv~e~~~ 413 (627)
.+.||+|.||.||+|.++ |..||||++.. .+++.+.+|.++++.+. +|+||+.+++.-..+. +++||++|.+
T Consensus 216 ~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~s--rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe 292 (513)
T KOG2052|consen 216 QEIIGKGRFGEVWRGRWR-GEDVAVKIFSS--RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHE 292 (513)
T ss_pred EEEecCccccceeecccc-CCceEEEEecc--cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeeccc
Confidence 578999999999999998 89999999964 34566777777776532 9999999998876543 5789999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-----cCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS-----EGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-----~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
.|+|++||.++ .++....++++..+|.||++||. +|.|.|.|||||+.|||+.+++.+.|+|+|+|...
T Consensus 293 ~GSL~DyL~r~------tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h 366 (513)
T KOG2052|consen 293 HGSLYDYLNRN------TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 366 (513)
T ss_pred CCcHHHHHhhc------cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEe
Confidence 99999999864 58999999999999999999995 46799999999999999999999999999999655
Q ss_pred CC--------CCCCCCCccccCccccCCCC------CCCcchhHHHHHHHHHHHhC----------CCCCCCCCCCCCCC
Q 006884 489 NF--------PTTATRTIGYRAPEVTETRK------ASQKSDVYSFGVLLLEMLTG----------KAPLQHSGHDDVVD 544 (627)
Q Consensus 489 ~~--------~~~~~~t~~y~aPE~~~~~~------~~~~~Dv~S~Gvvl~el~tg----------~~pf~~~~~~~~~~ 544 (627)
.. ....+||-+|||||++...- .-..+||||||.|+||+..+ +.||.+....|. .
T Consensus 367 ~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DP-s 445 (513)
T KOG2052|consen 367 DSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDP-S 445 (513)
T ss_pred cccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCC-C
Confidence 32 23456899999999986532 12469999999999998763 456654433221 1
Q ss_pred HHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 545 LPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
. +-.+.++..... .+.........+.+..+.++|+.||..+|..|-|+-.+.+.|.++.+.
T Consensus 446 ~-eeMrkVVCv~~~----RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~ 506 (513)
T KOG2052|consen 446 F-EEMRKVVCVQKL----RPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNS 506 (513)
T ss_pred H-HHHhcceeeccc----CCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcC
Confidence 1 112222222222 222233344578889999999999999999999999999999998753
No 30
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=3.3e-39 Score=326.17 Aligned_cols=236 Identities=23% Similarity=0.404 Sum_probs=200.3
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCH---HHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATK---REFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||+||||+-+ +.+.||+|.+.+....+ +.+.+|+++++.+ +||||+.++++|+...+.++|+||+.|
T Consensus 7 ~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~l-kHpniv~m~esfEt~~~~~vVte~a~g 85 (808)
T KOG0597|consen 7 YEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSL-KHPNIVEMLESFETSAHLWVVTEYAVG 85 (808)
T ss_pred HHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhc-CCcchhhHHHhhcccceEEEEehhhhh
Confidence 467999999999999955 68899999987664443 5588899999999 999999999999999999999999977
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC--
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-- 492 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~-- 492 (627)
+|..++... ..+++..+..++.+++.||.|||+.+ |.|||+||.|||+++++.+|+||||+|+.+....
T Consensus 86 -~L~~il~~d-----~~lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~v 156 (808)
T KOG0597|consen 86 -DLFTILEQD-----GKLPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSV 156 (808)
T ss_pred -hHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhhhhhcccCcee
Confidence 999999865 35899999999999999999999998 9999999999999999999999999999886543
Q ss_pred --CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 493 --TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 493 --~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
...|||-|||||+..+..|+..+|.||+||++||+++|++||... .+...++.+..+...
T Consensus 157 ltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~------si~~Lv~~I~~d~v~------------ 218 (808)
T KOG0597|consen 157 LTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR------SITQLVKSILKDPVK------------ 218 (808)
T ss_pred eeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH------HHHHHHHHHhcCCCC------------
Confidence 235899999999999999999999999999999999999999743 233344444433211
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
-.......+..++...+.+||.+|.+-.+++.
T Consensus 219 ~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 219 PPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred CcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 01133445667777889999999999999876
No 31
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-38 Score=298.86 Aligned_cols=199 Identities=24% Similarity=0.375 Sum_probs=177.5
Q ss_pred CCHHHHHHHHhcccCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCC
Q 006884 329 FDLEDLLRASAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD 403 (627)
Q Consensus 329 ~~~~~l~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~ 403 (627)
+.++|. .+...||.|+||+|.+++.+ +|..+|+|++.+... ..+....|..+++.+ .||.++++.+.|.+..
T Consensus 41 ~~l~df--e~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v-~~PFlv~l~~t~~d~~ 117 (355)
T KOG0616|consen 41 YSLQDF--ERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAV-SHPFLVKLYGTFKDNS 117 (355)
T ss_pred cchhhh--hheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhc-cCceeEEEEEeeccCC
Confidence 445555 33578999999999999966 688999999976532 234567788999999 8999999999999999
Q ss_pred ceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecc
Q 006884 404 EKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVG 483 (627)
Q Consensus 404 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG 483 (627)
..++||||.+||.|..++++. ++++...++.+|.+|+.||+|||+.+ |++|||||+|||+|.+|.+||+|||
T Consensus 118 ~lymvmeyv~GGElFS~Lrk~-----~rF~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFG 189 (355)
T KOG0616|consen 118 NLYMVMEYVPGGELFSYLRKS-----GRFSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFG 189 (355)
T ss_pred eEEEEEeccCCccHHHHHHhc-----CCCCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEecc
Confidence 999999999999999999975 35999999999999999999999998 9999999999999999999999999
Q ss_pred cccccCCC-CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 006884 484 LAHLINFP-TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSG 538 (627)
Q Consensus 484 ~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~ 538 (627)
+|+..... -+-+|||.|+|||++....|...+|+|||||++|||+.|.+||...+
T Consensus 190 FAK~v~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~ 245 (355)
T KOG0616|consen 190 FAKRVSGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDN 245 (355)
T ss_pred ceEEecCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCC
Confidence 99987654 35679999999999999999999999999999999999999998654
No 32
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-38 Score=326.33 Aligned_cols=244 Identities=23% Similarity=0.373 Sum_probs=199.1
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccc-----c-cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV-----A-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||.|+.|... ++..||+|++... . ...+.+.+|+.+++++..||||++++.++......++||||
T Consensus 22 ~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy 101 (370)
T KOG0583|consen 22 GRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEY 101 (370)
T ss_pred eeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEe
Confidence 467999999999999854 6899999976543 1 23456778999999995599999999999999999999999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC-CCeEEeecccccccC-
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD-LNGCISDVGLAHLIN- 489 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~-~~~ki~DfG~a~~~~- 489 (627)
+.+|+|.+++... ..+.+..+..++.|++.|++|+|+.+ |+||||||+|||++.+ +++||+|||++....
T Consensus 102 ~~gGdL~~~i~~~-----g~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~ 173 (370)
T KOG0583|consen 102 CSGGDLFDYIVNK-----GRLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNLKLSDFGLSAISPG 173 (370)
T ss_pred cCCccHHHHHHHc-----CCCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCEEEeccccccccCC
Confidence 9999999999873 35888999999999999999999999 9999999999999999 999999999999772
Q ss_pred ---CCCCCCCCccccCccccCCCC-CC-CcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006884 490 ---FPTTATRTIGYRAPEVTETRK-AS-QKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 490 ---~~~~~~~t~~y~aPE~~~~~~-~~-~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
...+.+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||+.. +.+...+.+......
T Consensus 174 ~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~------~~~~l~~ki~~~~~~------ 241 (370)
T KOG0583|consen 174 EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDS------NVPNLYRKIRKGEFK------ 241 (370)
T ss_pred CCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCc------cHHHHHHHHhcCCcc------
Confidence 345778999999999999977 86 7899999999999999999999863 222223332221110
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhc
Q 006884 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQ 608 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~ 608 (627)
-..... ..+...++.+|+..+|.+|+++.++++ -.-++
T Consensus 242 ---~p~~~~--S~~~~~Li~~mL~~~P~~R~t~~~i~~-h~w~~ 279 (370)
T KOG0583|consen 242 ---IPSYLL--SPEARSLIEKMLVPDPSTRITLLEILE-HPWFQ 279 (370)
T ss_pred ---CCCCcC--CHHHHHHHHHHcCCCcccCCCHHHHhh-Chhhc
Confidence 001110 345667888999999999999999993 33344
No 33
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3.8e-38 Score=323.07 Aligned_cols=254 Identities=22% Similarity=0.347 Sum_probs=195.7
Q ss_pred hcccCcCCceEEEEEEEcC-----------------CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEE
Q 006884 339 AEVLGKGSYGSTYKAILED-----------------GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYY 399 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~ 399 (627)
.+.||+|+||.||++.+++ +..||+|.+..... ...++.+|++++.++ +||||+++++++
T Consensus 10 ~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 88 (304)
T cd05096 10 KEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRL-KDPNIIRLLGVC 88 (304)
T ss_pred eeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCeeEEEEEE
Confidence 4679999999999998542 33699999875422 345789999999999 999999999999
Q ss_pred eeCCceeEEEecCCCCcHHHHhhhcCC--------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCC
Q 006884 400 YSKDEKLVVYSYMPAGSLFMLLHRNRS--------------DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIK 465 (627)
Q Consensus 400 ~~~~~~~lv~e~~~~gsL~~~l~~~~~--------------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk 465 (627)
.+.+..++||||+++|+|.+++..... .....++|....+++.|++.||.|||+.+ |+|||||
T Consensus 89 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---ivH~dlk 165 (304)
T cd05096 89 VDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN---FVHRDLA 165 (304)
T ss_pred ecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC---ccccCcc
Confidence 999999999999999999999865321 11235788999999999999999999998 9999999
Q ss_pred CCCeEecCCCCeEEeecccccccCCCC------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh--CCCCCCCC
Q 006884 466 SSNVLLTQDLNGCISDVGLAHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT--GKAPLQHS 537 (627)
Q Consensus 466 p~NILl~~~~~~ki~DfG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t--g~~pf~~~ 537 (627)
|+|||++.++.+||+|||+++...... ...++..|+|||++.+..++.++||||||+++|||++ +..||...
T Consensus 166 p~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~ 245 (304)
T cd05096 166 TRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGEL 245 (304)
T ss_pred hhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcC
Confidence 999999999999999999997653321 2234678999999988889999999999999999987 55677653
Q ss_pred CCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 006884 538 GHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQ 606 (627)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~ 606 (627)
... ................... ...+.....+.+++.+||+.+|++|||+++|.+.|++
T Consensus 246 ~~~---~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 246 TDE---QVIENAGEFFRDQGRQVYL-------FRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CHH---HHHHHHHHHhhhccccccc-------cCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 321 1122222211111100000 0111233467889999999999999999999998863
No 34
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.7e-38 Score=327.55 Aligned_cols=247 Identities=25% Similarity=0.357 Sum_probs=206.5
Q ss_pred hcccCcCCceEEEEEEE-cCCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+.|.|-.|++ .+|+.+|||++.+.. .....+++|+-+|+.+ .|||++++++.|+++.++|+|.||++
T Consensus 17 gkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi-~HpnVl~LydVwe~~~~lylvlEyv~ 95 (786)
T KOG0588|consen 17 GKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLI-EHPNVLRLYDVWENKQHLYLVLEYVP 95 (786)
T ss_pred cccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHh-cCCCeeeeeeeeccCceEEEEEEecC
Confidence 46799999999999995 479999999987652 2356789999999988 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|.|++++-+. +++.+.++.+.+.||+.|+.|+|..+ |+|||+||+|+|+|..+++||+|||+|......
T Consensus 96 gGELFdylv~k-----G~l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gkl 167 (786)
T KOG0588|consen 96 GGELFDYLVRK-----GPLPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKL 167 (786)
T ss_pred CchhHHHHHhh-----CCCCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeeeccceeecccCCcc
Confidence 99999999864 46899999999999999999999998 999999999999999999999999999776443
Q ss_pred -CCCCCCccccCccccCCCCCC-CcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 492 -TTATRTIGYRAPEVTETRKAS-QKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~~~-~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
.+.+|++.|.|||++.+.+|+ .++||||.|||||-|+||+.||++. ++...+.++-+...
T Consensus 168 LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd------Nir~LLlKV~~G~f------------ 229 (786)
T KOG0588|consen 168 LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD------NIRVLLLKVQRGVF------------ 229 (786)
T ss_pred ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc------cHHHHHHHHHcCcc------------
Confidence 467899999999999999995 7899999999999999999999843 33333333322221
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~ 612 (627)
........+..+|+.+|+..||+.|.|++||+++-.-.....+
T Consensus 230 ~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~~ 272 (786)
T KOG0588|consen 230 EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTSL 272 (786)
T ss_pred cCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCCC
Confidence 1112233456678889999999999999999997655544433
No 35
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=7.8e-38 Score=329.62 Aligned_cols=250 Identities=28% Similarity=0.436 Sum_probs=197.5
Q ss_pred hcccCcCCceEEEEEEE------cCCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAIL------EDGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|+. .++..||||+++... ...+.+.+|++++..+.+||||++++++|...+..++|||
T Consensus 40 ~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E 119 (375)
T cd05104 40 GKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITE 119 (375)
T ss_pred hheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeeh
Confidence 58899999999999973 235689999987543 2345688999999999889999999999999999999999
Q ss_pred cCCCCcHHHHhhhcCC----------------------------------------------------------------
Q 006884 411 YMPAGSLFMLLHRNRS---------------------------------------------------------------- 426 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~---------------------------------------------------------------- 426 (627)
|+++|+|.++++..+.
T Consensus 120 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (375)
T cd05104 120 YCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDV 199 (375)
T ss_pred hccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceeccccc
Confidence 9999999999975321
Q ss_pred ------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC------CC
Q 006884 427 ------DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT------TA 494 (627)
Q Consensus 427 ------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~------~~ 494 (627)
.....++|..+.+++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++...... ..
T Consensus 200 ~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~ 276 (375)
T cd05104 200 TSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNA 276 (375)
T ss_pred HHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCC
Confidence 01235789999999999999999999998 9999999999999999999999999997654322 12
Q ss_pred CCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChH
Q 006884 495 TRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVE 573 (627)
Q Consensus 495 ~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 573 (627)
.++..|+|||++.+..++.++||||||+++|||++ |..||....... . ....+....... ...
T Consensus 277 ~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~--~----~~~~~~~~~~~~-------~~~--- 340 (375)
T cd05104 277 RLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS--K----FYKMIKEGYRML-------SPE--- 340 (375)
T ss_pred CCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH--H----HHHHHHhCccCC-------CCC---
Confidence 23567999999999999999999999999999998 888987542211 1 111122111100 000
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006884 574 EEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607 (627)
Q Consensus 574 ~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~ 607 (627)
....++.+++.+||+.+|++||++.||++.|++.
T Consensus 341 ~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 341 CAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 1123577888999999999999999999999864
No 36
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-39 Score=295.64 Aligned_cols=250 Identities=22% Similarity=0.363 Sum_probs=205.5
Q ss_pred CCCHHHHHHHHhcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeC
Q 006884 328 NFDLEDLLRASAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSK 402 (627)
Q Consensus 328 ~~~~~~l~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~ 402 (627)
.+.++++ +..+.||+|-||.||.|+.+ ++..||+|++.+.+ ....++.+|+++...| +||||++++++|.+.
T Consensus 18 ~~~l~df--eigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L-~hpnilrlY~~fhd~ 94 (281)
T KOG0580|consen 18 TWTLDDF--EIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHL-RHPNILRLYGYFHDS 94 (281)
T ss_pred ccchhhc--cccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeeccc-CCccHHhhhhheecc
Confidence 3455555 33688999999999999955 68899999987653 3467889999999999 999999999999999
Q ss_pred CceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeec
Q 006884 403 DEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDV 482 (627)
Q Consensus 403 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~Df 482 (627)
...|+++||.+.|++...|+..+ ...++......+..|+|.|+.|+|..+ ++||||||+|+|++.++..||+||
T Consensus 95 ~riyLilEya~~gel~k~L~~~~---~~~f~e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~~~lkiAdf 168 (281)
T KOG0580|consen 95 KRIYLILEYAPRGELYKDLQEGR---MKRFDEQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGSAGELKIADF 168 (281)
T ss_pred ceeEEEEEecCCchHHHHHHhcc---cccccccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCCCCCeeccCC
Confidence 99999999999999999998543 345788888899999999999999988 999999999999999999999999
Q ss_pred cccccc--CCCCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccc
Q 006884 483 GLAHLI--NFPTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAE 560 (627)
Q Consensus 483 G~a~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (627)
|.+... ....+.+||..|.|||...+..++..+|+|++|++.||++.|.+||+....++.. ..+. ..+
T Consensus 169 GwsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etY------krI~----k~~ 238 (281)
T KOG0580|consen 169 GWSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETY------KRIR----KVD 238 (281)
T ss_pred CceeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHH------HHHH----Hcc
Confidence 998654 3446778999999999999999999999999999999999999999876532211 1111 111
Q ss_pred ccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006884 561 VFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMI 604 (627)
Q Consensus 561 ~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L 604 (627)
..++ .... ....++|.+|+..+|.+|.+..|++.+-
T Consensus 239 ~~~p-----~~is---~~a~dlI~~ll~~~p~~r~~l~~v~~hp 274 (281)
T KOG0580|consen 239 LKFP-----STIS---GGAADLISRLLVKNPIERLALTEVMDHP 274 (281)
T ss_pred ccCC-----cccC---hhHHHHHHHHhccCccccccHHHHhhhH
Confidence 1121 1112 2455788899999999999999998764
No 37
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.7e-38 Score=320.09 Aligned_cols=239 Identities=22% Similarity=0.378 Sum_probs=191.6
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
...||+|+||.||+++.+ +|..+|+|++++... .-+.+..|-.+|... .+|.||+++..|++.+.+||||||++
T Consensus 146 Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~-ds~~vVKLyYsFQD~~~LYLiMEylP 224 (550)
T KOG0605|consen 146 LKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEV-DSPWVVKLYYSFQDKEYLYLIMEYLP 224 (550)
T ss_pred heeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhc-CCCcEEEEEEEecCCCeeEEEEEecC
Confidence 578999999999999966 589999999987642 335677888888885 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC----
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN---- 489 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~---- 489 (627)
||++..+|.+. ..+++..+...+.+++.|+.-+|+.| +|||||||+|+|||..|++||+|||++.-+.
T Consensus 225 GGD~mTLL~~~-----~~L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~ 296 (550)
T KOG0605|consen 225 GGDMMTLLMRK-----DTLTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHR 296 (550)
T ss_pred CccHHHHHHhc-----CcCchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccccchhhhhhh
Confidence 99999999865 46999999999999999999999999 9999999999999999999999999984320
Q ss_pred ---------------------CC--------------------------CCCCCCccccCccccCCCCCCCcchhHHHHH
Q 006884 490 ---------------------FP--------------------------TTATRTIGYRAPEVTETRKASQKSDVYSFGV 522 (627)
Q Consensus 490 ---------------------~~--------------------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gv 522 (627)
.. ...+|||.|||||++.+..|+..+|+||+||
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ 376 (550)
T KOG0605|consen 297 IESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGC 376 (550)
T ss_pred hhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHH
Confidence 00 0123789999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCC-CCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCC---CHH
Q 006884 523 LLLEMLTGKAPLQHSGHDDV-VDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRP---KMD 598 (627)
Q Consensus 523 vl~el~tg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RP---s~~ 598 (627)
|+|||+.|.+||...+..+. ..+..|-..+. .+...+...+..++|.+|+. ||++|- .++
T Consensus 377 ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~---------------fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~ 440 (550)
T KOG0605|consen 377 IMYEMLVGYPPFCSETPQETYRKIVNWRETLK---------------FPEEVDLSDEAKDLITRLLC-DPENRLGSKGAE 440 (550)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHhhhcc---------------CCCcCcccHHHHHHHHHHhc-CHHHhcCcccHH
Confidence 99999999999987543321 12222211111 01111112455677788888 999996 466
Q ss_pred HHHH
Q 006884 599 DVVR 602 (627)
Q Consensus 599 ev~~ 602 (627)
||.+
T Consensus 441 EIK~ 444 (550)
T KOG0605|consen 441 EIKK 444 (550)
T ss_pred HHhc
Confidence 6654
No 38
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-39 Score=319.13 Aligned_cols=237 Identities=24% Similarity=0.380 Sum_probs=197.0
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
+.||+|.||.||+|... .++.||+|++.... ...+++.+|+.++..+ +++||.+++|.+..+..++++|||+.||+
T Consensus 19 ~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~-~~~~it~yygsyl~g~~LwiiMey~~gGs 97 (467)
T KOG0201|consen 19 ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQC-DSPNITEYYGSYLKGTKLWIIMEYCGGGS 97 (467)
T ss_pred hhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhc-CcchHHhhhhheeecccHHHHHHHhcCcc
Confidence 67999999999999965 68899999987653 3457889999999999 99999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC----CC
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF----PT 492 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~----~~ 492 (627)
+.+.++.. ..+++....-|+.++..|+.|||+++ .+|||||+.|||+..+|.+|++|||.+.+... ..
T Consensus 98 v~~lL~~~-----~~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~ 169 (467)
T KOG0201|consen 98 VLDLLKSG-----NILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRK 169 (467)
T ss_pred hhhhhccC-----CCCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEecceeeeeechhhccc
Confidence 99999754 23477777788999999999999998 99999999999999999999999999977643 36
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
++.||+.|||||++.+..|+.|+||||||++.+||.+|.+|+.....-....+ + .+-..+.+..
T Consensus 170 tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlfl-------I-----pk~~PP~L~~---- 233 (467)
T KOG0201|consen 170 TFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFL-------I-----PKSAPPRLDG---- 233 (467)
T ss_pred cccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEe-------c-----cCCCCCcccc----
Confidence 78899999999999999999999999999999999999999986543211100 0 0111111111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.....+.+++..|++++|+.||+|.++++
T Consensus 234 -~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 234 -DFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred -ccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 23334666777999999999999999987
No 39
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=7.9e-38 Score=317.53 Aligned_cols=253 Identities=23% Similarity=0.295 Sum_probs=198.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||++... +++.||+|.+.... .....+.+|++++..+ +|+|++++.+++.+.+..++|+||++
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~iv~~~~~~~~~~~~~lv~e~~~ 83 (285)
T cd05631 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKV-NSRFVVSLAYAYETKDALCLVLTIMN 83 (285)
T ss_pred EEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhc-CCCcEEEEEEEEccCCeEEEEEEecC
Confidence 367999999999999964 78999999986432 2234578899999999 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|..++.... ...+++..+..++.|++.||.|||+.+ |+||||||+|||+++++.+||+|||++......
T Consensus 84 ~g~L~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 157 (285)
T cd05631 84 GGDLKFHIYNMG---NPGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGET 157 (285)
T ss_pred CCcHHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCe
Confidence 999998886432 235899999999999999999999998 999999999999999999999999999875332
Q ss_pred -CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 492 -TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
....|+..|+|||++.+..++.++|||||||++|||++|+.||........ ...+......... .
T Consensus 158 ~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~---~~~~~~~~~~~~~-----------~ 223 (285)
T cd05631 158 VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK---REEVDRRVKEDQE-----------E 223 (285)
T ss_pred ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh---HHHHHHHhhcccc-----------c
Confidence 234578999999999999999999999999999999999999986533211 1111111111000 0
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH--HHhhccccc
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRPK-----MDDVVRM--IEQIQQPEL 612 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RPs-----~~ev~~~--L~~~~~~~~ 612 (627)
........+.+++.+||+.+|++||+ +++++++ ++.+....+
T Consensus 224 ~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~~~~ 272 (285)
T cd05631 224 YSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFKRL 272 (285)
T ss_pred CCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCHHHH
Confidence 00112235667888999999999997 8888874 444433333
No 40
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-38 Score=331.25 Aligned_cols=232 Identities=24% Similarity=0.343 Sum_probs=194.3
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
..+||+|.||+|+++..+ +++.+|||++++... .-+..+.|..++....+||.++.++..|+..++.+.||||..
T Consensus 373 l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~ 452 (694)
T KOG0694|consen 373 LAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVA 452 (694)
T ss_pred EEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEecC
Confidence 578999999999999976 578999999987632 345677888888888789999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc----C
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI----N 489 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~----~ 489 (627)
||++..+.+. ..+++..+..+|..|+.||+|||+++ ||+||||-+|||+|.+|++||+|||+++.. .
T Consensus 453 Ggdm~~~~~~------~~F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~ 523 (694)
T KOG0694|consen 453 GGDLMHHIHT------DVFSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGD 523 (694)
T ss_pred CCcEEEEEec------ccccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEEecccccccccCCCCC
Confidence 9995544442 46999999999999999999999999 999999999999999999999999999864 2
Q ss_pred CCCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 490 FPTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 490 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
...+.+||+.|||||++.+..|+..+|+|||||+||||+.|..||.+.++++. ...++.++..
T Consensus 524 ~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~------FdsI~~d~~~----------- 586 (694)
T KOG0694|consen 524 RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEV------FDSIVNDEVR----------- 586 (694)
T ss_pred ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHH------HHHHhcCCCC-----------
Confidence 34577899999999999999999999999999999999999999997665432 2222322211
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKM 597 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~ 597 (627)
.......+.++|+.+.++++|++|--+
T Consensus 587 -yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 587 -YPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred -CCCcccHHHHHHHHHHhccCcccccCC
Confidence 111223456778889999999999755
No 41
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-38 Score=336.52 Aligned_cols=252 Identities=21% Similarity=0.314 Sum_probs=206.5
Q ss_pred hcccCcCCceEEEEEEEcCC-cEEEEEEeccc-ccCHHHHHHHHHHHHHhccCCceeceee-EEee------CCceeEEE
Q 006884 339 AEVLGKGSYGSTYKAILEDG-TTVVVKRLREV-AATKREFEQQMEVVGTIGKHSNVVPVRA-YYYS------KDEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~-~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~h~niv~~~~-~~~~------~~~~~lv~ 409 (627)
.++|.+|||+.||.|....+ ..||+|++... ....+...+|+++|+.|..|+|||.+++ .... ..+.+++|
T Consensus 42 ~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLm 121 (738)
T KOG1989|consen 42 EKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLM 121 (738)
T ss_pred EEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeeh
Confidence 57899999999999997765 99999998654 3345778999999999989999999999 3321 23578999
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
|||.||.|-+++..... ..+++.++++|+.|+++|+++||... +||||||||-+||||+.+++.||||||.|...-
T Consensus 122 EyC~gg~Lvd~mn~Rlq---~~lte~eVLkIf~dv~~AVa~mH~~~-pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~ 197 (738)
T KOG1989|consen 122 EYCKGGSLVDFMNTRLQ---TRLTEDEVLKIFYDVCEAVAAMHYLK-PPIIHRDLKIENVLLSADGNYKLCDFGSATTKI 197 (738)
T ss_pred hhccCCcHHHHHHHHHh---ccCChHHHHHHHHHHHHHHHHHhcCC-CccchhhhhhhheEEcCCCCEEeCccccccccc
Confidence 99999999999985432 34999999999999999999999986 899999999999999999999999999986543
Q ss_pred CCC-------------CCCCCccccCcccc---CCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHh
Q 006884 490 FPT-------------TATRTIGYRAPEVT---ETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVV 553 (627)
Q Consensus 490 ~~~-------------~~~~t~~y~aPE~~---~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 553 (627)
... ....|+.|+|||.+ .+...++|+|||+|||+||-|+....||++...-.+
T Consensus 198 ~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laI----------- 266 (738)
T KOG1989|consen 198 LSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAI----------- 266 (738)
T ss_pred CCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeE-----------
Confidence 221 12258899999986 567889999999999999999999999986532221
Q ss_pred hhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccccc
Q 006884 554 REEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRN 614 (627)
Q Consensus 554 ~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~~~ 614 (627)
++... ..+..+.+...|.+||..||+.+|++||++-+|++.+-+|.......
T Consensus 267 --------lng~Y-~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~~ 318 (738)
T KOG1989|consen 267 --------LNGNY-SFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCPI 318 (738)
T ss_pred --------Eeccc-cCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCCc
Confidence 11111 12233566778888999999999999999999999999998766533
No 42
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=9.4e-38 Score=328.70 Aligned_cols=252 Identities=24% Similarity=0.384 Sum_probs=197.9
Q ss_pred HhcccCcCCceEEEEEEEc------CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEE
Q 006884 338 SAEVLGKGSYGSTYKAILE------DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVY 409 (627)
Q Consensus 338 ~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 409 (627)
..+.||+|+||.||+++.. ++..||+|+++.... ....+.+|+++++.+.+|+||++++++|...+..++||
T Consensus 42 ~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~ 121 (374)
T cd05106 42 FGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVIT 121 (374)
T ss_pred ehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeH
Confidence 3578999999999998842 245799999875432 23568889999999978999999999999999999999
Q ss_pred ecCCCCcHHHHhhhcCC---------------------------------------------------------------
Q 006884 410 SYMPAGSLFMLLHRNRS--------------------------------------------------------------- 426 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~--------------------------------------------------------------- 426 (627)
||+++|+|.++++....
T Consensus 122 ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (374)
T cd05106 122 EYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEE 201 (374)
T ss_pred hhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccccchh
Confidence 99999999999865321
Q ss_pred --CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC------CCCCCc
Q 006884 427 --DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT------TATRTI 498 (627)
Q Consensus 427 --~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~------~~~~t~ 498 (627)
.....+++..+++++.|++.||.|||+.+ |+||||||+|||+++++.+||+|||+++...... ...++.
T Consensus 202 ~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~ 278 (374)
T cd05106 202 DTEDSWPLDLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPV 278 (374)
T ss_pred ccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCcc
Confidence 01134788999999999999999999998 9999999999999999999999999997654322 112346
Q ss_pred cccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHH
Q 006884 499 GYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMV 577 (627)
Q Consensus 499 ~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 577 (627)
.|+|||++....++.++|||||||++|||++ |+.||....... . ............ . .. ....
T Consensus 279 ~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~--~----~~~~~~~~~~~~--~-----~~---~~~~ 342 (374)
T cd05106 279 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS--K----FYKMVKRGYQMS--R-----PD---FAPP 342 (374)
T ss_pred ceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH--H----HHHHHHcccCcc--C-----CC---CCCH
Confidence 7999999988899999999999999999997 999997543211 0 111111111000 0 00 1124
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHHHHHhhc
Q 006884 578 QMLQIALSCVAKVPDSRPKMDDVVRMIEQIQ 608 (627)
Q Consensus 578 ~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~ 608 (627)
++.+++.+||+.+|++||++.++++.|+++.
T Consensus 343 ~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 343 EIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 5778888999999999999999999999864
No 43
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=3.5e-37 Score=307.72 Aligned_cols=241 Identities=23% Similarity=0.404 Sum_probs=198.4
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHH
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 418 (627)
.+.||+|+||.||++.++++..+|+|.+.......+++.+|+++++++ +||||+++++++...+..++||||+++|+|.
T Consensus 9 ~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~ 87 (256)
T cd05114 9 MKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKL-SHPKLVQLYGVCTQQKPLYIVTEFMENGCLL 87 (256)
T ss_pred eeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHC-CCCCceeEEEEEccCCCEEEEEEcCCCCcHH
Confidence 467999999999999998888999999876656678899999999999 9999999999999999999999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-----C
Q 006884 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-----T 493 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~-----~ 493 (627)
++++... ..+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||.++...... .
T Consensus 88 ~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05114 88 NYLRQRQ----GKLSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSG 160 (256)
T ss_pred HHHHhCc----cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCC
Confidence 9987542 25899999999999999999999998 9999999999999999999999999987653321 1
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
..++..|+|||++.+..++.++||||||+++|||++ |+.||..... .+.+..+...... ..+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~------~~~~~~i~~~~~~---~~~-------- 223 (256)
T cd05114 161 AKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN------YEVVEMISRGFRL---YRP-------- 223 (256)
T ss_pred CCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHHHCCCCC---CCC--------
Confidence 123557999999988889999999999999999999 8999975421 1112222111110 000
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMI 604 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L 604 (627)
......+.+++.+||+.+|++||+++++++.|
T Consensus 224 ~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 224 KLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 11223578899999999999999999999876
No 44
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.6e-37 Score=310.95 Aligned_cols=245 Identities=25% Similarity=0.454 Sum_probs=200.6
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHH
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 418 (627)
.+.||+|+||.||+|...++..||+|.+.......+.+.+|+.++.++ +|+||+++++.+...+..++++||+++|+|.
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 89 (261)
T cd05072 11 VKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTL-QHDKLVRLYAVVTKEEPIYIITEYMAKGSLL 89 (261)
T ss_pred eeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCCcEEEEecCCCCcHH
Confidence 478999999999999988888999999876555567899999999999 9999999999999999999999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-----C
Q 006884 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-----T 493 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~-----~ 493 (627)
++++... +..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.++|+|||+++...... .
T Consensus 90 ~~l~~~~---~~~~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 163 (261)
T cd05072 90 DFLKSDE---GGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREG 163 (261)
T ss_pred HHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCccceecCCCceeccCC
Confidence 9997542 346889999999999999999999988 9999999999999999999999999998764322 1
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
..++..|+|||++....++.++||||||+++|||++ |+.||...... ..... ........ ..
T Consensus 164 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~------~~~~~-~~~~~~~~-------~~--- 226 (261)
T cd05072 164 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS------DVMSA-LQRGYRMP-------RM--- 226 (261)
T ss_pred CccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH------HHHHH-HHcCCCCC-------CC---
Confidence 224567999999988889999999999999999998 99999753211 11111 11111100 00
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~ 607 (627)
.....++.+++.+|+..+|++||+++++.+.|+++
T Consensus 227 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 227 ENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred CCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 11224567888999999999999999999999864
No 45
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=4.2e-37 Score=308.96 Aligned_cols=244 Identities=22% Similarity=0.401 Sum_probs=196.3
Q ss_pred hcccCcCCceEEEEEEEc----CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAILE----DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 412 (627)
.+.||+|+||.||+|.++ .+..||+|.++.... ..+.+.+|++.+..+ +||||+++++++..++..++||||+
T Consensus 10 ~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~ 88 (266)
T cd05064 10 ERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQF-DHSNIVRLEGVITRGNTMMIVTEYM 88 (266)
T ss_pred eeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEecCCCcEEEEEeC
Confidence 467999999999999853 356899999876532 235788999999998 9999999999999999999999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT 492 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~ 492 (627)
++|+|.+++.... ..+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.++++|||.+.......
T Consensus 89 ~~~~L~~~l~~~~----~~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~ 161 (266)
T cd05064 89 SNGALDSFLRKHE----GQLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA 161 (266)
T ss_pred CCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECCCcccccccccc
Confidence 9999999997542 36899999999999999999999998 9999999999999999999999999876543221
Q ss_pred -----CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhh
Q 006884 493 -----TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVEL 566 (627)
Q Consensus 493 -----~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 566 (627)
...++..|+|||++.+..++.++||||||+++||+++ |+.||...... .....+ .+....
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~------~~~~~~-~~~~~~------- 227 (266)
T cd05064 162 IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ------DVIKAV-EDGFRL------- 227 (266)
T ss_pred hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH------HHHHHH-HCCCCC-------
Confidence 1223568999999999999999999999999999875 99999754321 111111 111100
Q ss_pred hcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006884 567 LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607 (627)
Q Consensus 567 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~ 607 (627)
.........+.+++.+||+.+|++||+++++.+.|+++
T Consensus 228 ---~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 228 ---PAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred ---CCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 01122334577788899999999999999999998765
No 46
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=3.1e-37 Score=312.81 Aligned_cols=248 Identities=26% Similarity=0.487 Sum_probs=198.5
Q ss_pred hcccCcCCceEEEEEEEcC------CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILED------GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|.... ...||+|.+..... ...++.+|++++..+ +||||+++++++...+..++++|
T Consensus 10 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~~~~e 88 (283)
T cd05048 10 LEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDL-QHPNIVCLLGVCTKEQPTCMLFE 88 (283)
T ss_pred hhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhc-CCcccceEEEEEcCCCceEEEEe
Confidence 4789999999999998643 25799998865432 345688999999999 99999999999998889999999
Q ss_pred cCCCCcHHHHhhhcCCCCC-----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEE
Q 006884 411 YMPAGSLFMLLHRNRSDGG-----------TALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCI 479 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~~-----------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki 479 (627)
|+++|+|.+++........ ..+++.....++.|++.||.|||+.+ ++||||||+||++++++.+||
T Consensus 89 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~~~~~~~~L 165 (283)
T cd05048 89 YLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNCLVGEGLTVKI 165 (283)
T ss_pred cCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccccceEEEcCCCcEEE
Confidence 9999999999976432111 46889999999999999999999998 999999999999999999999
Q ss_pred eecccccccCCCC------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHH
Q 006884 480 SDVGLAHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSV 552 (627)
Q Consensus 480 ~DfG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~ 552 (627)
+|||+++...... ...+++.|+|||++.+..++.++|||||||++|||++ |..||.+....+ + . ..
T Consensus 166 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~---~---~-~~ 238 (283)
T cd05048 166 SDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE---V---I-EM 238 (283)
T ss_pred CCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH---H---H-HH
Confidence 9999987653221 2234678999999988899999999999999999998 999997543211 1 1 11
Q ss_pred hhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006884 553 VREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607 (627)
Q Consensus 553 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~ 607 (627)
+....... .......++.+++.+||+.+|.+||++.||++.|+.+
T Consensus 239 i~~~~~~~----------~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 239 IRSRQLLP----------CPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HHcCCcCC----------CcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 11111110 1122345677888999999999999999999999763
No 47
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=8.1e-38 Score=323.23 Aligned_cols=236 Identities=21% Similarity=0.311 Sum_probs=192.0
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
+.||+|+||.||+++.+ +|+.||+|+++... .....+.+|++++.++ +||||+++.+++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~lv~e~~~~ 79 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNT-RHPFLTALKYSFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCCCEEEEEEcCCEEEEEEeCCCC
Confidence 36999999999999965 68999999987542 1234677899999999 999999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC----
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF---- 490 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~---- 490 (627)
|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 80 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 151 (323)
T cd05571 80 GELFFHLSRE-----RVFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGAT 151 (323)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCc
Confidence 9999998754 35899999999999999999999998 99999999999999999999999999875422
Q ss_pred CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 491 PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 491 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+. ......+..... .+ .
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~------~~~~~~~~~~~~-------~~--p- 215 (323)
T cd05571 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH------EKLFELILMEEI-------RF--P- 215 (323)
T ss_pred ccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH------HHHHHHHHcCCC-------CC--C-
Confidence 1234589999999999999999999999999999999999999975321 111111111110 00 0
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRP-----KMDDVVR 602 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~ev~~ 602 (627)
.....++.+++.+||+.||++|| ++.++++
T Consensus 216 --~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 216 --RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred --CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 11223466788899999999999 7999876
No 48
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.2e-37 Score=311.50 Aligned_cols=242 Identities=28% Similarity=0.509 Sum_probs=189.6
Q ss_pred hcccCcCCceEEEEEEEc-----CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILE-----DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
.+.||.|.||.||+|.+. .+..|+||.++.... ..++|.+|++.+.++ +||||++++|++...+..++|+||
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKL-RHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTH-SBTTBE-EEEEEESSSSEEEEEE-
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccc-cccccccccccccccccccccccc
Confidence 367999999999999976 357899999965332 357899999999999 999999999999988889999999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 491 (627)
+++|+|.+++.... ...+++..+.+|+.|++.||.|||+.+ ++|+||+++||+++.++.+||+|||++......
T Consensus 83 ~~~g~L~~~L~~~~---~~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~ 156 (259)
T PF07714_consen 83 CPGGSLDDYLKSKN---KEPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEK 156 (259)
T ss_dssp -TTEBHHHHHHHTC---TTTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETTTEEEEESTTTGEETTTS
T ss_pred cccccccccccccc---ccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc
Confidence 99999999998752 246899999999999999999999988 999999999999999999999999999876221
Q ss_pred ------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006884 492 ------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 492 ------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
........|+|||.+.+..++.++||||||+++||+++ |+.||... ........+..... ..
T Consensus 157 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~------~~~~~~~~~~~~~~-~~---- 225 (259)
T PF07714_consen 157 SKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY------DNEEIIEKLKQGQR-LP---- 225 (259)
T ss_dssp SSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS------CHHHHHHHHHTTEE-TT----
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccc------cccccccccccccc-ce----
Confidence 22335668999999998889999999999999999999 67888643 22222222221111 11
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006884 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMI 604 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L 604 (627)
........+.+++.+||+.+|++||+++++++.|
T Consensus 226 ------~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 226 ------IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ------SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ------eccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 0111234567888999999999999999999876
No 49
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-38 Score=288.41 Aligned_cols=253 Identities=20% Similarity=0.340 Sum_probs=201.7
Q ss_pred hcccCcCCceEEEEEE-EcCCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeC-----CceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAI-LEDGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSK-----DEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~-----~~~~lv~e~ 411 (627)
.+.+|+|||+.||.+. ..++..+|+|++.-.. ...+..++|++..+++ +|||+++++++...+ ...|+++.|
T Consensus 26 ~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf-~s~~vl~l~dh~l~~~~D~~~~~yll~Py 104 (302)
T KOG2345|consen 26 QRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKF-NSPNVLRLVDHQLREEKDGKHEAYLLLPY 104 (302)
T ss_pred eeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhh-CCcchHHHHHHHHHhhccCceeEEEEeeh
Confidence 4779999999999999 5578899999987554 5667889999999999 999999999887543 348999999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 491 (627)
...|+|.+.+...+. ++..+++.+.++|+.++++||++||+.. ++++||||||.|||+.+++.+++.|||.++...-.
T Consensus 105 y~~Gsl~d~i~~~k~-kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~ 182 (302)
T KOG2345|consen 105 YKRGSLLDEIERLKI-KGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQ 182 (302)
T ss_pred hccccHHHHHHHHhh-cCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCccccceE
Confidence 999999999987543 4668999999999999999999999987 78999999999999999999999999998765321
Q ss_pred -------------CCCCCCccccCccccCC---CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhh
Q 006884 492 -------------TTATRTIGYRAPEVTET---RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVRE 555 (627)
Q Consensus 492 -------------~~~~~t~~y~aPE~~~~---~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 555 (627)
....-|..|.|||.+.- ...++++|||||||+||+|+.|..||+...+... .
T Consensus 183 i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~Gg-S----------- 250 (302)
T KOG2345|consen 183 IEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGG-S----------- 250 (302)
T ss_pred eechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCC-e-----------
Confidence 11224788999999854 4568999999999999999999999985322110 0
Q ss_pred cccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhc
Q 006884 556 EWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQ 608 (627)
Q Consensus 556 ~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~ 608 (627)
....+..... ..+........+.+++.+|++.||.+||++.+++..++.+.
T Consensus 251 -laLAv~n~q~-s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 251 -LALAVQNAQI-SIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred -EEEeeecccc-ccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 0011111111 11122224556778888999999999999999999998764
No 50
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-38 Score=319.82 Aligned_cols=248 Identities=24% Similarity=0.377 Sum_probs=210.0
Q ss_pred hcccCcCCceEEEEEEEcC-CcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 339 AEVLGKGSYGSTYKAILED-GTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
..+||-|-||.||.|.|+. .-.||||.+++....-++|..|..+|+.+ +|||+|+++|.|......|+|+|||.+|+|
T Consensus 272 khKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKei-kHpNLVqLLGVCT~EpPFYIiTEfM~yGNL 350 (1157)
T KOG4278|consen 272 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTHEPPFYIITEFMCYGNL 350 (1157)
T ss_pred eeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhh-cCccHHHHhhhhccCCCeEEEEecccCccH
Confidence 4789999999999999874 56799999998888889999999999999 999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCCC--C
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTA--T 495 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~~--~ 495 (627)
.+||++... ..++--..+.+|.||+.|+.||..++ +|||||.++|.|+.++..+||+|||+++++...... .
T Consensus 351 LdYLRecnr---~ev~avvLlyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHA 424 (1157)
T KOG4278|consen 351 LDYLRECNR---SEVPAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHA 424 (1157)
T ss_pred HHHHHHhch---hhcchhHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhccccccceEEeeccchhhhhcCCceeccc
Confidence 999998643 35666778899999999999999998 999999999999999999999999999998654322 2
Q ss_pred C---CccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006884 496 R---TIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 496 ~---t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
| .+.|.|||-+....++.|+|||+|||+|||+.| |..||.+.+- ..+..++..+.. +. .
T Consensus 425 GAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl-------SqVY~LLEkgyR-------M~---~ 487 (1157)
T KOG4278|consen 425 GAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-------SQVYGLLEKGYR-------MD---G 487 (1157)
T ss_pred CccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH-------HHHHHHHhcccc-------cc---C
Confidence 2 567999999999999999999999999999988 8889876431 112222322221 11 2
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
.+.|...+.++|+.||++.|.+||++.|+-+.++.|-.+
T Consensus 488 PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~ 526 (1157)
T KOG4278|consen 488 PEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSS 526 (1157)
T ss_pred CCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcc
Confidence 234556788899999999999999999999999998654
No 51
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.8e-37 Score=319.00 Aligned_cols=234 Identities=21% Similarity=0.300 Sum_probs=189.7
Q ss_pred cCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 342 LGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 342 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
||+|+||.||+++.. +++.||+|++.... .....+.+|++++..+ +||||+++++++...+..++||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 79 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQV-NCPFIVPLKFSFQSPEKLYLVLAFINGGE 79 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCcEeceeeEEecCCeEEEEEcCCCCCc
Confidence 799999999999976 57899999986532 2345678899999999 99999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----C
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----T 492 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~----~ 492 (627)
|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 80 L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 151 (312)
T cd05585 80 LFHHLQRE-----GRFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTN 151 (312)
T ss_pred HHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccc
Confidence 99999754 35899999999999999999999998 999999999999999999999999998764221 2
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.... .............. ...
T Consensus 152 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~------~~~~~~~~~~~~~~---------~~~-- 214 (312)
T cd05585 152 TFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN------VNEMYRKILQEPLR---------FPD-- 214 (312)
T ss_pred cccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC------HHHHHHHHHcCCCC---------CCC--
Confidence 3458899999999999999999999999999999999999997532 22222222221100 001
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCC---HHHHHH
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPK---MDDVVR 602 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs---~~ev~~ 602 (627)
.....+.+++.+||..+|++||+ +.|+++
T Consensus 215 -~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 215 -GFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred -cCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 12234567888999999999985 566654
No 52
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=6.9e-37 Score=320.31 Aligned_cols=245 Identities=23% Similarity=0.369 Sum_probs=190.2
Q ss_pred CHHHHHHHHhcccCcCCceEEEEEEEc-CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCcee
Q 006884 330 DLEDLLRASAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKL 406 (627)
Q Consensus 330 ~~~~l~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~ 406 (627)
.+.++. ..+.||+|+||.||+++.. +++.||||++..... ..+.+.+|++++..+ +|+||+++++++...+..+
T Consensus 72 ~~~~~~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 148 (353)
T PLN00034 72 SLSELE--RVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDV-NHPNVVKCHDMFDHNGEIQ 148 (353)
T ss_pred CHHHHh--hhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhC-CCCCcceeeeEeccCCeEE
Confidence 444542 3578999999999999965 689999999864322 346788999999999 9999999999999999999
Q ss_pred EEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccc
Q 006884 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH 486 (627)
Q Consensus 407 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 486 (627)
+||||+++|+|.... ..++.....++.|++.||.|||+.+ |+||||||+|||+++++.+||+|||+++
T Consensus 149 lv~e~~~~~~L~~~~---------~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~~ 216 (353)
T PLN00034 149 VLLEFMDGGSLEGTH---------IADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVSR 216 (353)
T ss_pred EEEecCCCCcccccc---------cCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccce
Confidence 999999999985432 3566778899999999999999998 9999999999999999999999999998
Q ss_pred ccCCC----CCCCCCccccCccccCC-----CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcc
Q 006884 487 LINFP----TTATRTIGYRAPEVTET-----RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEW 557 (627)
Q Consensus 487 ~~~~~----~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 557 (627)
..... ....||..|+|||++.. ...+.++|||||||++|||++|+.||......+ .............
T Consensus 217 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~ 293 (353)
T PLN00034 217 ILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD---WASLMCAICMSQP 293 (353)
T ss_pred ecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc---HHHHHHHHhccCC
Confidence 65432 23468899999998743 234568999999999999999999997432221 1111111110000
Q ss_pred cccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 558 TAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 558 ~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
. ........++.+++.+||+.+|++||++.|++++
T Consensus 294 -~----------~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 294 -P----------EAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred -C----------CCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 0011223457788889999999999999999885
No 53
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.4e-37 Score=320.45 Aligned_cols=245 Identities=20% Similarity=0.307 Sum_probs=194.1
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
+.||+|+||.||+++.+ +++.||+|+++.... ..+.+..|..++..+.+||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 36899999999999965 688999999975421 2345778889998887899999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC----
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF---- 490 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~---- 490 (627)
|+|..++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 81 g~L~~~~~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~ 152 (329)
T cd05588 81 GDLMFHMQRQ-----RKLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDT 152 (329)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCccccccccCCCc
Confidence 9999888654 35899999999999999999999998 99999999999999999999999999875321
Q ss_pred CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCC--CCCHHHHHHHHhhhcccccccchhhhc
Q 006884 491 PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDD--VVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 491 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||+.....+ ......+........... .
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-- 224 (329)
T cd05588 153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIR------I-- 224 (329)
T ss_pred cccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCC------C--
Confidence 223457899999999999999999999999999999999999997533221 111222332222221110 0
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCCC------HHHHHHH
Q 006884 569 YQDVEEEMVQMLQIALSCVAKVPDSRPK------MDDVVRM 603 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs------~~ev~~~ 603 (627)
... ....+.+++.+|++.+|.+||+ +++++++
T Consensus 225 p~~---~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 225 PRS---LSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred CCC---CCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 011 1234667888999999999997 6777653
No 54
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1e-37 Score=303.65 Aligned_cols=239 Identities=23% Similarity=0.397 Sum_probs=203.2
Q ss_pred hcccCcCCceEEEEEEE-cCCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|.||.|-++.. ..|+.||||.+++... +.-.+.+|+++|..| +||||+.++..|+..+...+||||..
T Consensus 58 ~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsL-NHPhII~IyEVFENkdKIvivMEYaS 136 (668)
T KOG0611|consen 58 TETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSL-NHPHIIQIYEVFENKDKIVIVMEYAS 136 (668)
T ss_pred HHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhc-CCCceeehhhhhcCCceEEEEEEecC
Confidence 57799999999999995 6799999999987643 234588999999999 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|.|++|+.+. +.+++.++..++.||..|+.|+|.++ ++|||||-+|||+|.|+++||+|||++..+...
T Consensus 137 ~GeLYDYiSer-----~~LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADFGLSNly~~~kf 208 (668)
T KOG0611|consen 137 GGELYDYISER-----GSLSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADFGLSNLYADKKF 208 (668)
T ss_pred CccHHHHHHHh-----ccccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeeccchhhhhccccH
Confidence 99999999875 35999999999999999999999998 999999999999999999999999999877553
Q ss_pred -CCCCCCccccCccccCCCCCC-CcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 492 -TTATRTIGYRAPEVTETRKAS-QKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~~~-~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
.+++|++-|.+||++.+.+|. +.+|-||+||+||.|+.|..||++.+. ...++++-..... .
T Consensus 209 LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh------k~lvrQIs~GaYr----E------ 272 (668)
T KOG0611|consen 209 LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH------KRLVRQISRGAYR----E------ 272 (668)
T ss_pred HHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH------HHHHHHhhccccc----C------
Confidence 578899999999999999984 789999999999999999999987532 2334433322211 1
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~ 605 (627)
++......-+|++|+..+|++|.|++||..+..
T Consensus 273 ---P~~PSdA~gLIRwmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 273 ---PETPSDASGLIRWMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred ---CCCCchHHHHHHHHHhcCcccchhHHHHhhhhe
Confidence 112223445888999999999999999998753
No 55
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=3.8e-37 Score=325.44 Aligned_cols=252 Identities=24% Similarity=0.395 Sum_probs=199.1
Q ss_pred hcccCcCCceEEEEEEEcC------CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILED------GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|+... +..||||+++.... ..+.+.+|++++.++..||||++++++|.+.+..++|||
T Consensus 42 ~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 121 (400)
T cd05105 42 GRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITE 121 (400)
T ss_pred hheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEE
Confidence 4789999999999998531 34699999975432 345789999999999669999999999999999999999
Q ss_pred cCCCCcHHHHhhhcCCC---------------------------------------------------------------
Q 006884 411 YMPAGSLFMLLHRNRSD--------------------------------------------------------------- 427 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~--------------------------------------------------------------- 427 (627)
|+++|+|.++++.+...
T Consensus 122 y~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (400)
T cd05105 122 YCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYS 201 (400)
T ss_pred ecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhhh
Confidence 99999999998754210
Q ss_pred ----------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEE
Q 006884 428 ----------------------------GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCI 479 (627)
Q Consensus 428 ----------------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki 479 (627)
....+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dikp~Nill~~~~~~kL 278 (400)
T cd05105 202 DIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN---CVHRDLAARNVLLAQGKIVKI 278 (400)
T ss_pred hcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHhEEEeCCCEEEE
Confidence 1134788899999999999999999998 999999999999999999999
Q ss_pred eecccccccCCCC------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHH
Q 006884 480 SDVGLAHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSV 552 (627)
Q Consensus 480 ~DfG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~ 552 (627)
+|||+++...... ...++..|+|||++.+..++.++|||||||++|||++ |..||....... .....
T Consensus 279 ~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~------~~~~~ 352 (400)
T cd05105 279 CDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS------TFYNK 352 (400)
T ss_pred EeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH------HHHHH
Confidence 9999997653221 2234678999999998899999999999999999997 999987542211 01111
Q ss_pred hhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006884 553 VREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 553 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 609 (627)
....... .........+.+++.+||+.+|++||++.+|.++|+++..
T Consensus 353 ~~~~~~~----------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 353 IKSGYRM----------AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred HhcCCCC----------CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 1111100 0111233467789999999999999999999999998754
No 56
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=8.8e-38 Score=318.15 Aligned_cols=238 Identities=18% Similarity=0.253 Sum_probs=194.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||++..+ +++.||+|++.... ...+.+.+|++++..+ +||||+++++++.+.+..++||||++
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 84 (291)
T cd05612 6 IKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEV-SHPFIIRLFWTEHDQRFLYMLMEYVP 84 (291)
T ss_pred eeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhC-CCCcHhhhHhhhccCCeEEEEEeCCC
Confidence 467999999999999976 68899999986432 2345688899999999 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC-C
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-T 492 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-~ 492 (627)
+|+|.+++... ..+++.....++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 85 ~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~ 156 (291)
T cd05612 85 GGELFSYLRNS-----GRFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTW 156 (291)
T ss_pred CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcchhccCCcc
Confidence 99999999754 35889999999999999999999998 999999999999999999999999999876433 2
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
...|++.|+|||++.+..++.++|||||||++|||++|+.||..... ......+..... .+ ..
T Consensus 157 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~------~~~~~~i~~~~~-------~~--~~-- 219 (291)
T cd05612 157 TLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP------FGIYEKILAGKL-------EF--PR-- 219 (291)
T ss_pred cccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCc-------CC--Cc--
Confidence 34588999999999998899999999999999999999999975421 111222211110 00 00
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPK-----MDDVVRM 603 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs-----~~ev~~~ 603 (627)
.....+.+++.+|++.||.+||+ ++|++++
T Consensus 220 -~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 220 -HLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred -cCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 11234667888999999999995 8888875
No 57
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.5e-36 Score=304.05 Aligned_cols=245 Identities=25% Similarity=0.431 Sum_probs=201.3
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHH
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 418 (627)
.+.||+|++|.||+|..++++.||+|.++......+++.+|++++.++ +|+||+++++++...+..+++|||+++++|.
T Consensus 11 ~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 89 (261)
T cd05068 11 LRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKL-RHPKLIQLYAVCTLEEPIYIVTELMKYGSLL 89 (261)
T ss_pred EEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHC-CCCCccceeEEEecCCCeeeeeecccCCcHH
Confidence 478999999999999988788999999876655678899999999999 8999999999999999999999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCC--CC-
Q 006884 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTT--AT- 495 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~--~~- 495 (627)
+++.... +..+++..+..++.|++.|+.|||+.+ ++||||||+||++++++.+||+|||+++....... ..
T Consensus 90 ~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 163 (261)
T cd05068 90 EYLQGGA---GRALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREG 163 (261)
T ss_pred HHHhccC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCC
Confidence 9997543 346899999999999999999999998 99999999999999999999999999987643211 11
Q ss_pred --CCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 496 --RTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 496 --~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
.+..|+|||+..+..++.++||||||+++|||++ |+.||...... .....+. ..... ...
T Consensus 164 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~------~~~~~~~-~~~~~----------~~~ 226 (261)
T cd05068 164 AKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA------EVLQQVD-QGYRM----------PCP 226 (261)
T ss_pred CcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH------HHHHHHH-cCCCC----------CCC
Confidence 2357999999998899999999999999999999 99999753211 1111111 11000 001
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~ 607 (627)
......+.+++.+|++.+|++||++.++.+.|+++
T Consensus 227 ~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 227 PGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred CcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 12234677888999999999999999999999864
No 58
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=4.9e-37 Score=316.57 Aligned_cols=248 Identities=22% Similarity=0.397 Sum_probs=197.0
Q ss_pred hcccCcCCceEEEEEEEc-CCc----EEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILE-DGT----TVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||.||+|++. ++. .||+|.++... ...+++..|+.++..+ +||||+++++++... ..++++||
T Consensus 12 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~g~~~~~-~~~~v~e~ 89 (316)
T cd05108 12 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTS-TVQLITQL 89 (316)
T ss_pred eeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEcCC-Cceeeeec
Confidence 478999999999999864 333 38999986542 2346788899999999 999999999998764 56799999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 491 (627)
+++|+|.+++.... ..+++...+.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 90 ~~~g~l~~~l~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 162 (316)
T cd05108 90 MPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAD 162 (316)
T ss_pred CCCCCHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEccccccccccCC
Confidence 99999999998642 35889999999999999999999998 999999999999999999999999999876432
Q ss_pred CC------CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006884 492 TT------ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 492 ~~------~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
.. ...+..|+|||++....++.++||||||+++|||++ |+.||+..... . ...........
T Consensus 163 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~------~-~~~~~~~~~~~----- 230 (316)
T cd05108 163 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS------E-ISSILEKGERL----- 230 (316)
T ss_pred CcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH------H-HHHHHhCCCCC-----
Confidence 21 123567999999999999999999999999999998 99998753211 1 11112111100
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006884 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~ 612 (627)
.....+...+.+++.+||..+|++||++.+++..|.++.....
T Consensus 231 -----~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~~ 273 (316)
T cd05108 231 -----PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ 273 (316)
T ss_pred -----CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCCc
Confidence 0011123457788999999999999999999999999876654
No 59
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=4.4e-37 Score=318.40 Aligned_cols=245 Identities=20% Similarity=0.305 Sum_probs=192.5
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
+.||+|+||.||+++.+ +++.||+|+++... ...+.+..|+.++..+.+||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 36999999999999965 57899999987542 12345677888888777899999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC----
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF---- 490 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~---- 490 (627)
|+|..++... ..+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~~L~~~~~~~-----~~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~ 152 (329)
T cd05618 81 GDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT 152 (329)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCc
Confidence 9999888654 35899999999999999999999998 99999999999999999999999999875422
Q ss_pred CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCC--CCHHHHHHHHhhhcccccccchhhhc
Q 006884 491 PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDV--VDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 491 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......+. .....++......... . +
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~-~-~------ 224 (329)
T cd05618 153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-R-I------ 224 (329)
T ss_pred cccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC-C-C------
Confidence 1234578999999999999999999999999999999999999964322211 1122222222211111 0 0
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCCC------HHHHHHH
Q 006884 569 YQDVEEEMVQMLQIALSCVAKVPDSRPK------MDDVVRM 603 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs------~~ev~~~ 603 (627)
. ......+.+++.+||+.||++||+ +++++++
T Consensus 225 p---~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 225 P---RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred C---CCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 0 112235667888999999999998 4676554
No 60
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.5e-36 Score=304.51 Aligned_cols=245 Identities=25% Similarity=0.386 Sum_probs=199.9
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
.+.||+|+||.||+|..+ .++.||+|.+.......+++.+|++++..+ +|+||+++++++..++..+++|||+++++|
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 89 (263)
T cd05052 11 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNL 89 (263)
T ss_pred eeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhC-CCCChhheEEEEcCCCCcEEEEEeCCCCcH
Confidence 467999999999999965 588999999876555567899999999999 999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCC----
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTT---- 493 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~---- 493 (627)
.+++.... ...+++..++.++.|++.||+|||+.+ ++||||||+||++++++.+||+|||++........
T Consensus 90 ~~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~ 163 (263)
T cd05052 90 LDYLRECN---RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 163 (263)
T ss_pred HHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCcEEeCCCccccccccceeeccC
Confidence 99997542 245899999999999999999999988 99999999999999999999999999977643221
Q ss_pred -CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006884 494 -ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 494 -~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
...+..|+|||++.+..++.++||||||+++|||++ |..||..... .+..... ...... . .
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~------~~~~~~~-~~~~~~-----~-----~ 226 (263)
T cd05052 164 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL------SQVYELL-EKGYRM-----E-----R 226 (263)
T ss_pred CCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHH-HCCCCC-----C-----C
Confidence 123567999999998899999999999999999998 9999875321 1111111 111100 0 0
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006884 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~ 607 (627)
.......+.+++.+||+.+|++||++.++++.|+.+
T Consensus 227 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 227 PEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 111234577788999999999999999999999875
No 61
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.6e-37 Score=321.48 Aligned_cols=237 Identities=21% Similarity=0.330 Sum_probs=192.4
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
+.||+|+||.||++..+ +++.||+|++.... .....+.+|+++++.+ +||||+++.+++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~Ey~~~ 79 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNT-RHPFLTSLKYSFQTKDRLCFVMEYVNG 79 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceEEEEEcCCEEEEEEeCCCC
Confidence 36899999999999965 68999999987542 2335678899999999 999999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
|+|..++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 80 g~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~ 151 (328)
T cd05593 80 GELFFHLSRE-----RVFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAAT 151 (328)
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCccCCCcccc
Confidence 9999988754 35899999999999999999999998 999999999999999999999999998754221
Q ss_pred -CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 492 -TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+..... .+ ..
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~------~~~~~~~~~~~~-------~~--p~ 216 (328)
T cd05593 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH------EKLFELILMEDI-------KF--PR 216 (328)
T ss_pred cccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH------HHHHHHhccCCc-------cC--CC
Confidence 234588999999999988999999999999999999999999975322 111111111110 00 01
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRP-----KMDDVVRM 603 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~ev~~~ 603 (627)
. ...++.+++.+||..+|++|| ++.|++++
T Consensus 217 ~---~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 217 T---LSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred C---CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 1 123456788899999999997 89999865
No 62
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=9e-37 Score=316.52 Aligned_cols=191 Identities=22% Similarity=0.336 Sum_probs=167.9
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+++.+ ++..||+|.+.... ...+.+.+|++++..+ +||||+++++++..++..++||||+++|
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 88 (331)
T cd06649 10 ISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISICMEHMDGG 88 (331)
T ss_pred EEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEEEeecCCCC
Confidence 467999999999999976 57889999886542 2346789999999999 9999999999999999999999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--CC
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--TT 493 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--~~ 493 (627)
+|.+++... ..+++..+..++.|++.||.|||+.+ .|+||||||+|||++.++.+||+|||+++..... ..
T Consensus 89 ~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 161 (331)
T cd06649 89 SLDQVLKEA-----KRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 161 (331)
T ss_pred cHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccccccccc
Confidence 999999754 35889999999999999999999853 3999999999999999999999999998765432 23
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHS 537 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~ 537 (627)
..++..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 162 ~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~ 205 (331)
T cd06649 162 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPP 205 (331)
T ss_pred CCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 45789999999999989999999999999999999999999653
No 63
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=3e-37 Score=313.76 Aligned_cols=253 Identities=21% Similarity=0.343 Sum_probs=190.6
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|+.+ +++.||+|+++... .....+.+|++++..+ +||||+++++++...+..++||||+++
T Consensus 10 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~- 87 (288)
T cd07871 10 LDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNL-KHANIVTLHDIIHTERCLTLVFEYLDS- 87 (288)
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhC-CCCCEeeEEEEEcCCCeEEEEEeCCCc-
Confidence 467999999999999965 68899999986432 2345678899999999 999999999999998899999999975
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~---- 491 (627)
+|.+++... +..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 88 ~l~~~l~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~ 160 (288)
T cd07871 88 DLKQYLDNC----GNLMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTY 160 (288)
T ss_pred CHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCcceeeccCCCccc
Confidence 899888654 235788999999999999999999998 999999999999999999999999998765322
Q ss_pred CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhh----hcccc-----cc
Q 006884 492 TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVR----EEWTA-----EV 561 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~-----~~ 561 (627)
....+++.|+|||++.+ ..++.++||||+||++|||++|+.||......+.. ........ +.+.. +.
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd07871 161 SNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEEL---HLIFRLLGTPTEETWPGITSNEEF 237 (288)
T ss_pred cCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHHhCCCChHHhhccccchhh
Confidence 23346889999998865 56899999999999999999999999764322111 00000000 00000 00
Q ss_pred cchhhhcC--CC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 562 FDVELLKY--QD----VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 562 ~d~~l~~~--~~----~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
........ .. .+....+..+++.+|++.||.+|||++|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 238 RSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred hccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000000 00 00112356788899999999999999999753
No 64
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=5.6e-37 Score=306.24 Aligned_cols=241 Identities=24% Similarity=0.424 Sum_probs=197.3
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHH
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 418 (627)
.+.||+|+||.||++.++++..+|+|.+........++.+|++++..+ +|+||+++++++...+..++|+||+++++|.
T Consensus 9 ~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 87 (256)
T cd05059 9 LKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKL-SHPNLVQLYGVCTKQRPIFIVTEYMANGCLL 87 (256)
T ss_pred hhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhC-CCCCEEEEEEEEcCCCceEEEEecCCCCCHH
Confidence 577999999999999988778899999876555667889999999999 9999999999999999999999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCC-----
Q 006884 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTT----- 493 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~----- 493 (627)
+++.... ..+++..+..++.|++.|+.|||+.+ ++||||||+||+++.++.+||+|||+++.......
T Consensus 88 ~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~ 160 (256)
T cd05059 88 NYLRERK----GKLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQG 160 (256)
T ss_pred HHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceecccccccccCC
Confidence 9997542 25899999999999999999999998 99999999999999999999999999876543221
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
..++..|+|||.+.+..++.++||||||+++||+++ |+.||......+ . ..... ... .. ...
T Consensus 161 ~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~---~~~~~-~~~-----~~-----~~~ 223 (256)
T cd05059 161 TKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE---V---VESVS-AGY-----RL-----YRP 223 (256)
T ss_pred CCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH---H---HHHHH-cCC-----cC-----CCC
Confidence 112357999999998899999999999999999999 899997532211 1 11111 110 00 001
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMI 604 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L 604 (627)
......+.+++.+||..+|++|||+.|+++.|
T Consensus 224 ~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 224 KLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 11334677899999999999999999999886
No 65
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=3.8e-37 Score=318.09 Aligned_cols=237 Identities=22% Similarity=0.325 Sum_probs=191.7
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
+.||+|+||.||++..+ +|+.||+|+++... .....+..|++++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCcceeeEEecCCEEEEEEeCCCC
Confidence 36999999999999965 68999999987542 2234567889999999 999999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
|+|..++... ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 80 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~ 151 (323)
T cd05595 80 GELFFHLSRE-----RVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 151 (323)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhccccCCCCc
Confidence 9999888754 35899999999999999999999998 999999999999999999999999998753221
Q ss_pred -CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 492 -TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. ........... . . ..
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~------~~~~~~~~~~~-----~--~--p~ 216 (323)
T cd05595 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE------RLFELILMEEI-----R--F--PR 216 (323)
T ss_pred cccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH------HHHHHHhcCCC-----C--C--CC
Confidence 2345789999999999989999999999999999999999999754321 11111111110 0 0 01
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRP-----KMDDVVRM 603 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~ev~~~ 603 (627)
. ....+.+++.+||+.+|++|| ++.+++++
T Consensus 217 ~---~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 217 T---LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred C---CCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 1 123456788899999999998 88888763
No 66
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=6e-37 Score=317.18 Aligned_cols=239 Identities=20% Similarity=0.280 Sum_probs=191.2
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
+.||+|+||.||+++.+ +++.||+|+++.... ..+.+..|+.++.++.+||||+.+++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999965 578999999975422 2345778888888887899999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC----
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF---- 490 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~---- 490 (627)
|+|..++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 ~~L~~~~~~~-----~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 152 (327)
T cd05617 81 GDLMFHMQRQ-----RKLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDT 152 (327)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceeccCCCCc
Confidence 9999988754 35899999999999999999999998 99999999999999999999999999875321
Q ss_pred CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 491 PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 491 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.............+........... + ..
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--~------p~ 224 (327)
T cd05617 153 TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIR--I------PR 224 (327)
T ss_pred eecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCC--C------CC
Confidence 223458899999999999999999999999999999999999997544333223233333322221110 0 01
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRPKM 597 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~ 597 (627)
. ....+.+++.+|+..||++|+++
T Consensus 225 ~---~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 225 F---LSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred C---CCHHHHHHHHHHhccCHHHcCCC
Confidence 1 12345678889999999999985
No 67
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=2.1e-36 Score=302.13 Aligned_cols=242 Identities=23% Similarity=0.362 Sum_probs=197.8
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHH
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 418 (627)
.+.||+|+||.||++...++..+|+|.+........++.+|++++.++ +||||+++++++...+..+++|||+++|+|.
T Consensus 9 ~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~ 87 (256)
T cd05113 9 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKL-SHEKLVQLYGVCTKQRPIYIVTEYMSNGCLL 87 (256)
T ss_pred eeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcC-CCCCeeeEEEEEccCCCcEEEEEcCCCCcHH
Confidence 467999999999999987777899999876555677899999999999 8999999999999888899999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCC-----
Q 006884 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTT----- 493 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~----- 493 (627)
+++.... ..+++..+++++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||.++.......
T Consensus 88 ~~i~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05113 88 NYLREHG----KRFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVG 160 (256)
T ss_pred HHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceecCCCceeecCC
Confidence 9997542 25899999999999999999999998 99999999999999999999999999876543221
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
..++..|+|||+..+..++.++||||||+++|||++ |+.||...... ............. ..
T Consensus 161 ~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~------~~~~~~~~~~~~~-----------~~ 223 (256)
T cd05113 161 SKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS------ETVEKVSQGLRLY-----------RP 223 (256)
T ss_pred CccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH------HHHHHHhcCCCCC-----------CC
Confidence 123467999999988889999999999999999998 99998753321 1111111111100 00
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~ 605 (627)
......+.+++.+||+.+|++||++.++++.|+
T Consensus 224 ~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 224 HLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 112346778899999999999999999998764
No 68
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.2e-37 Score=321.60 Aligned_cols=246 Identities=18% Similarity=0.268 Sum_probs=196.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.. +++.||+|++.... ...+.+..|++++..+ +||||+++++++...+..++||||++
T Consensus 6 ~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~~~~~~~~~~~~~lv~e~~~ 84 (333)
T cd05600 6 LTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTT-KSEWLVKLLYAFQDDEYLYLAMEYVP 84 (333)
T ss_pred EEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhC-CCCCCccEEEEEEcCCEEEEEEeCCC
Confidence 468999999999999976 58899999987542 2345678899999999 89999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC-CC
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF-PT 492 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~-~~ 492 (627)
+|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... ..
T Consensus 85 g~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~ 156 (333)
T cd05600 85 GGDFRTLLNNL-----GVLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYAN 156 (333)
T ss_pred CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCCcccccccC
Confidence 99999999754 35889999999999999999999998 99999999999999999999999999986643 23
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
...||+.|+|||++.+..++.++|||||||++|||++|+.||......+ ....+.... ..+...... ...
T Consensus 157 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~------~~~~i~~~~---~~~~~~~~~-~~~ 226 (333)
T cd05600 157 SVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNE------TWENLKYWK---ETLQRPVYD-DPR 226 (333)
T ss_pred CcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHH------HHHHHHhcc---ccccCCCCC-ccc
Confidence 4568999999999999899999999999999999999999997543211 111111100 000000000 000
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.....++.+++.+|+..+|.+||++++++++
T Consensus 227 ~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 227 FNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred cccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 1123456678889999999999999999975
No 69
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=3.4e-37 Score=319.31 Aligned_cols=238 Identities=19% Similarity=0.268 Sum_probs=194.3
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.+ +++.||+|++.... ...+.+.+|++++..+ +||||+++++++..++..++||||++
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 101 (329)
T PTZ00263 23 GETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMEL-SHPFIVNMMCSFQDENRVYFLLEFVV 101 (329)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEcCCEEEEEEcCCC
Confidence 478999999999999976 58899999986542 2345688999999999 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC-C
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-T 492 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-~ 492 (627)
+|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 102 ~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 173 (329)
T PTZ00263 102 GGELFTHLRKA-----GRFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTF 173 (329)
T ss_pred CChHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEeeccCceEcCCCcc
Confidence 99999999754 35788899999999999999999998 999999999999999999999999999876443 3
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
+..||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.... . . . ....
T Consensus 174 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~------~~~~~~i~~~~-~----~--~--p~~~ 238 (329)
T PTZ00263 174 TLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP------FRIYEKILAGR-L----K--F--PNWF 238 (329)
T ss_pred eecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH------HHHHHHHhcCC-c----C--C--CCCC
Confidence 45688999999999999999999999999999999999999975321 11111111111 0 0 0 0011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPK-----MDDVVRM 603 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs-----~~ev~~~ 603 (627)
...+.+++.+||+.||.+||+ ++|++++
T Consensus 239 ---~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 239 ---DGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred ---CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 124567888999999999997 6888754
No 70
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=6.5e-37 Score=315.96 Aligned_cols=237 Identities=23% Similarity=0.340 Sum_probs=190.9
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
+.||+|+||.||+++.+ +++.||+|++.... ...+.+..|.+++..+.+||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999976 58899999987532 23456677888888776899999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC----
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF---- 490 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~---- 490 (627)
|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 g~L~~~i~~~-----~~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~ 152 (320)
T cd05590 81 GDLMFHIQKS-----RRFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKT 152 (320)
T ss_pred chHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCc
Confidence 9999998754 35889999999999999999999998 99999999999999999999999999875422
Q ss_pred CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 491 PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 491 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+...... . ..
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~------~~~~~~i~~~~~~----~-----~~ 217 (320)
T cd05590 153 TSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE------DDLFEAILNDEVV----Y-----PT 217 (320)
T ss_pred ccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH------HHHHHHHhcCCCC----C-----CC
Confidence 1234578999999999998999999999999999999999999975432 1222222211100 0 00
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRPKM------DDVVR 602 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~------~ev~~ 602 (627)
....++.+++.+|++.||++||++ +++++
T Consensus 218 ---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~ 252 (320)
T cd05590 218 ---WLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILR 252 (320)
T ss_pred ---CCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHc
Confidence 112356678889999999999998 55555
No 71
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1e-36 Score=314.79 Aligned_cols=238 Identities=22% Similarity=0.343 Sum_probs=192.1
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
+.||+|+||.||+|+.+ +++.||+|++.... ...+.+..|.+++..+.+||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 36999999999999976 57899999987542 22345677888888776899999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC----
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF---- 490 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~---- 490 (627)
|+|..++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~ 152 (321)
T cd05591 81 GDLMFQIQRS-----RKFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVT 152 (321)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccceecccCCcc
Confidence 9999988754 35889999999999999999999998 99999999999999999999999999875422
Q ss_pred CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 491 PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 491 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+...... + ..
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~------~~~~~~i~~~~~~---~------p~ 217 (321)
T cd05591 153 TTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE------DDLFESILHDDVL---Y------PV 217 (321)
T ss_pred ccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH------HHHHHHHHcCCCC---C------CC
Confidence 1234578999999999998999999999999999999999999975432 1122222211110 0 00
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCC-------CHHHHHHH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRP-------KMDDVVRM 603 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RP-------s~~ev~~~ 603 (627)
....++.+++.+|++.+|++|| ++++++++
T Consensus 218 ---~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 218 ---WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred ---CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 1123566788899999999999 78888764
No 72
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=8.2e-37 Score=317.19 Aligned_cols=252 Identities=27% Similarity=0.392 Sum_probs=197.1
Q ss_pred hcccCcCCceEEEEEEEc------CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeC-CceeEEE
Q 006884 339 AEVLGKGSYGSTYKAILE------DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSK-DEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~-~~~~lv~ 409 (627)
.+.||+|+||.||+|... .++.||+|+++.... ..+.+.+|++++.++.+|+||++++++|... ...++++
T Consensus 12 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ 91 (337)
T cd05054 12 GKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 91 (337)
T ss_pred hcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEE
Confidence 578999999999999742 246899999875432 2346778999999998899999999988754 4678899
Q ss_pred ecCCCCcHHHHhhhcCCC--------------------------------------------------------CCCCCC
Q 006884 410 SYMPAGSLFMLLHRNRSD--------------------------------------------------------GGTALD 433 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~--------------------------------------------------------~~~~l~ 433 (627)
||+++|+|.+++...... ....++
T Consensus 92 ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (337)
T cd05054 92 EYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLT 171 (337)
T ss_pred ecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCC
Confidence 999999999998643210 013689
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC------CCCCCccccCccccC
Q 006884 434 WNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT------TATRTIGYRAPEVTE 507 (627)
Q Consensus 434 ~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~------~~~~t~~y~aPE~~~ 507 (627)
|..+.+++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++...... ...++..|+|||++.
T Consensus 172 ~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 248 (337)
T cd05054 172 LEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIF 248 (337)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhc
Confidence 9999999999999999999998 9999999999999999999999999998753221 223456799999999
Q ss_pred CCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHc
Q 006884 508 TRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSC 586 (627)
Q Consensus 508 ~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~C 586 (627)
+..++.++|||||||++|||++ |+.||......+ ............. .......++.+++.+|
T Consensus 249 ~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~------~~~~~~~~~~~~~----------~~~~~~~~~~~l~~~c 312 (337)
T cd05054 249 DKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE------EFCRRLKEGTRMR----------APEYATPEIYSIMLDC 312 (337)
T ss_pred CCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH------HHHHHHhccCCCC----------CCccCCHHHHHHHHHH
Confidence 9999999999999999999998 999997532211 1111111111100 0112234677889999
Q ss_pred ccCCCCCCCCHHHHHHHHHhhcc
Q 006884 587 VAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 587 l~~~P~~RPs~~ev~~~L~~~~~ 609 (627)
|+.+|++||++.|++++|+++.+
T Consensus 313 l~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 313 WHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred ccCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999999765
No 73
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=3.6e-36 Score=304.47 Aligned_cols=247 Identities=25% Similarity=0.434 Sum_probs=198.4
Q ss_pred hcccCcCCceEEEEEEEcC------CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILED------GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|...+ +..||||.++.... ..+.+.+|++++.++ +|+||+++++++......++|||
T Consensus 10 ~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e 88 (280)
T cd05049 10 KRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNF-QHENIVKFYGVCTEGDPPIMVFE 88 (280)
T ss_pred HhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhc-CCCCchheeeEEecCCCeEEEEe
Confidence 4779999999999998643 47899999876533 356899999999999 89999999999999999999999
Q ss_pred cCCCCcHHHHhhhcCC---------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEee
Q 006884 411 YMPAGSLFMLLHRNRS---------DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISD 481 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~---------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~D 481 (627)
|+++|+|.+++..... .....+++..+..++.|++.|+.|||+.+ ++||||||+||+++.++.+||+|
T Consensus 89 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~kl~d 165 (280)
T cd05049 89 YMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCLVGYDLVVKIGD 165 (280)
T ss_pred cCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEEEcCCCeEEECC
Confidence 9999999999976431 12345789999999999999999999998 99999999999999999999999
Q ss_pred cccccccCCC------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhh
Q 006884 482 VGLAHLINFP------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVR 554 (627)
Q Consensus 482 fG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~ 554 (627)
||+++..... ....+++.|+|||++.+..++.++||||||+++|||++ |+.||...... +......
T Consensus 166 ~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~------~~~~~~~- 238 (280)
T cd05049 166 FGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE------EVIECIT- 238 (280)
T ss_pred cccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH------HHHHHHH-
Confidence 9998754221 22234678999999999999999999999999999998 99998754321 1111111
Q ss_pred hcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 006884 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQ 606 (627)
Q Consensus 555 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~ 606 (627)
...... ........+.+++.+||..+|++||+++|+++.|++
T Consensus 239 ~~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 239 QGRLLQ----------RPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred cCCcCC----------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 111100 001223457788999999999999999999998863
No 74
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=3.6e-37 Score=317.26 Aligned_cols=236 Identities=24% Similarity=0.330 Sum_probs=188.6
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
+.||+|+||.||+|+.+ +++.||+|.++... ...+.+..|.+++....+||||+++++++.+++..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999976 58899999987542 23445667777777666899999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC----
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF---- 490 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~---- 490 (627)
|+|..++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 g~L~~~i~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 152 (316)
T cd05620 81 GDLMFHIQDK-----GRFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNR 152 (316)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCCeecccCCCc
Confidence 9999998753 35889999999999999999999998 99999999999999999999999999875321
Q ss_pred CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 491 PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 491 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.... +... .
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~------~~~~~~~~~~~-------~~~~--~ 217 (316)
T cd05620 153 ASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE------DELFESIRVDT-------PHYP--R 217 (316)
T ss_pred eeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCC-------CCCC--C
Confidence 2334578999999999999999999999999999999999999975421 11111111110 0000 0
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHH-HHH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRPKMD-DVV 601 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~-ev~ 601 (627)
....++.+++.+|++.||++||++. ++.
T Consensus 218 ---~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 218 ---WITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred ---CCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 1123456788899999999999985 555
No 75
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=2.9e-37 Score=317.87 Aligned_cols=237 Identities=24% Similarity=0.356 Sum_probs=188.9
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
+.||+|+||.||+|+.. +++.||+|+++... ...+.+..|..++....+||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999976 57899999987542 23345667777777666999999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC----
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF---- 490 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~---- 490 (627)
|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 g~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 152 (316)
T cd05619 81 GDLMFHIQSC-----HKFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAK 152 (316)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCc
Confidence 9999998753 35889999999999999999999998 99999999999999999999999999875321
Q ss_pred CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 491 PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 491 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+..... .+.
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~------~~~~~i~~~~~---~~~------- 216 (316)
T cd05619 153 TCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE------ELFQSIRMDNP---CYP------- 216 (316)
T ss_pred eeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCC---CCC-------
Confidence 12345789999999999989999999999999999999999999754311 11111111100 000
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHH-HHHH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRPKMD-DVVR 602 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~-ev~~ 602 (627)
......+.+++.+||+.+|++||++. ++.+
T Consensus 217 --~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 217 --RWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred --ccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 01123456788899999999999997 5544
No 76
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=4.2e-37 Score=312.59 Aligned_cols=255 Identities=17% Similarity=0.241 Sum_probs=192.5
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||+++.+ +++.||+|++.... ...+.+.+|++++..+ +||||+++++++..++..++||||+++
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 84 (287)
T cd07848 6 LGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTL-KQENIVELKEAFRRRGKLYLVFEYVEK 84 (287)
T ss_pred EEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhC-CCccccchhhhEecCCEEEEEEecCCC
Confidence 467999999999999976 57889999987542 2345678899999999 999999999999999999999999998
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
+.+..+... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~~l~~~~~~-----~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 156 (287)
T cd07848 85 NMLELLEEM-----PNGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNA 156 (287)
T ss_pred CHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCcccccccccc
Confidence 877655432 235889999999999999999999998 999999999999999999999999999876432
Q ss_pred --CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCC-HH--------HHHHHHhhhccccc
Q 006884 492 --TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVD-LP--------RWVRSVVREEWTAE 560 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~-~~--------~~~~~~~~~~~~~~ 560 (627)
....+++.|+|||++.+..++.++|||||||++|||++|+.||......+... +. .+............
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (287)
T cd07848 157 NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHG 236 (287)
T ss_pred cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcc
Confidence 12357889999999998889999999999999999999999997643211100 00 00000000000000
Q ss_pred ccchhhhcCCC-----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 561 VFDVELLKYQD-----VEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 561 ~~d~~l~~~~~-----~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
...+....... .......+.+++.+|++.+|++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 237 LRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred cccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000000000 0112345788999999999999999999975
No 77
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.6e-36 Score=310.88 Aligned_cols=237 Identities=24% Similarity=0.336 Sum_probs=187.8
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
+.||+|+||.||+|+.. +++.||+|+++... ...+.+..|.+++....+||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999965 57889999987542 22344566777776666899999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC----
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF---- 490 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~---- 490 (627)
|+|..++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 81 g~L~~~~~~~-----~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~ 152 (316)
T cd05592 81 GDLMFHIQSS-----GRFDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGK 152 (316)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCc
Confidence 9999998754 35889999999999999999999998 99999999999999999999999999975422
Q ss_pred CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 491 PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 491 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+. .+....+..... .+. .
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~------~~~~~~i~~~~~---~~~------~ 217 (316)
T cd05592 153 ASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE------DELFDSILNDRP---HFP------R 217 (316)
T ss_pred cccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH------HHHHHHHHcCCC---CCC------C
Confidence 1234578999999999998999999999999999999999999975432 111122111110 000 1
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHH-HHHH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRPKMD-DVVR 602 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~-ev~~ 602 (627)
. ...++.+++.+||+.+|++||++. ++.+
T Consensus 218 ~---~~~~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 218 W---ISKEAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred C---CCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 1 123456788899999999999875 5543
No 78
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.7e-36 Score=303.88 Aligned_cols=238 Identities=23% Similarity=0.381 Sum_probs=187.7
Q ss_pred cccCcCCceEEEEEEEcC-------------CcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCce
Q 006884 340 EVLGKGSYGSTYKAILED-------------GTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEK 405 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~ 405 (627)
+.||+|+||.||+|+..+ ...|++|.+.... .....+..|+.++..+ +||||+++++++..+...
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l-~hp~iv~~~~~~~~~~~~ 79 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQV-SHKHIVLLYGVCVRDVEN 79 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCCC
Confidence 468999999999998532 2258888876543 2345678888888888 999999999999999999
Q ss_pred eEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC-------eE
Q 006884 406 LVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN-------GC 478 (627)
Q Consensus 406 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~-------~k 478 (627)
++||||+++|+|..++.... ..+++..+.+++.|++.||+|||+.+ |+||||||+|||++.++. ++
T Consensus 80 ~lv~e~~~~~~l~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~~~~~~~~ 152 (262)
T cd05077 80 IMVEEFVEFGPLDLFMHRKS----DVLTTPWKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDGECGPFIK 152 (262)
T ss_pred EEEEecccCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccCCCCceeE
Confidence 99999999999999887532 35899999999999999999999998 999999999999987664 89
Q ss_pred EeecccccccCCCCCCCCCccccCccccC-CCCCCCcchhHHHHHHHHHHH-hCCCCCCCCCCCCCCCHHHHHHHHhhhc
Q 006884 479 ISDVGLAHLINFPTTATRTIGYRAPEVTE-TRKASQKSDVYSFGVLLLEML-TGKAPLQHSGHDDVVDLPRWVRSVVREE 556 (627)
Q Consensus 479 i~DfG~a~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~Dv~S~Gvvl~el~-tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 556 (627)
++|||++..........++..|+|||++. +..++.++||||||+++|||+ +|..||......+ . .......
T Consensus 153 l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~---~----~~~~~~~ 225 (262)
T cd05077 153 LSDPGIPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE---K----ERFYEGQ 225 (262)
T ss_pred eCCCCCCccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH---H----HHHHhcC
Confidence 99999998766555566788999999886 567899999999999999998 5888876432111 0 0000000
Q ss_pred ccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006884 557 WTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMI 604 (627)
Q Consensus 557 ~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L 604 (627)
. .. ......++.+++.+||+.+|++||++.+|++.+
T Consensus 226 -~-~~----------~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 226 -C-ML----------VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred -c-cC----------CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 0 00 011123567888999999999999999999876
No 79
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-37 Score=314.65 Aligned_cols=239 Identities=23% Similarity=0.370 Sum_probs=198.0
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
..||.|+||.||.++.. +...||||++...- ..-.++..|+.++..+ +|||++.+.|+|......|+||||| -
T Consensus 32 rEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l-~HPntieYkgCyLre~TaWLVMEYC-l 109 (948)
T KOG0577|consen 32 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQL-RHPNTIEYKGCYLREHTAWLVMEYC-L 109 (948)
T ss_pred HHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhc-cCCCcccccceeeccchHHHHHHHH-h
Confidence 56999999999999954 67899999986431 2346799999999999 9999999999999999999999999 5
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCCC
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTA 494 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~~ 494 (627)
|+-.+.+.-.+ .++.+..+..|+.+++.||+|||+++ .||||||+.|||+++.|.+|++|||.|....+..++
T Consensus 110 GSAsDlleVhk----KplqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsF 182 (948)
T KOG0577|consen 110 GSASDLLEVHK----KPLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSF 182 (948)
T ss_pred ccHHHHHHHHh----ccchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccchhhcCchhcc
Confidence 57777776553 46888899999999999999999998 999999999999999999999999999999999999
Q ss_pred CCCccccCccccC---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006884 495 TRTIGYRAPEVTE---TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 495 ~~t~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
+|||.|||||++. .+.|+-|+||||+|+++.||...++|+-.++. -..+..+.++.. +.+ .
T Consensus 183 vGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA------MSALYHIAQNes------PtL-q--- 246 (948)
T KOG0577|consen 183 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA------MSALYHIAQNES------PTL-Q--- 246 (948)
T ss_pred cCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH------HHHHHHHHhcCC------CCC-C---
Confidence 9999999999984 57899999999999999999999999764421 112222222221 111 1
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
..+....|.+++..|+++-|.+|||.++++++
T Consensus 247 s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 247 SNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred CchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 23444566677779999999999999998764
No 80
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=5.8e-37 Score=292.60 Aligned_cols=254 Identities=22% Similarity=0.282 Sum_probs=193.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccC---HHHHHHHHHHHHHhccCCceeceeeEEee--CCceeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAAT---KREFEQQMEVVGTIGKHSNVVPVRAYYYS--KDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~~~~~~~~--~~~~~lv~e~~ 412 (627)
.+.|++|.||.||+|+++ ++..||+|+++-.... .-.-.+|+.++.+. +|||||.+...... -+..|+||||+
T Consensus 81 lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~-~H~NIV~vkEVVvG~~~d~iy~VMe~~ 159 (419)
T KOG0663|consen 81 LNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKA-RHPNIVEVKEVVVGSNMDKIYIVMEYV 159 (419)
T ss_pred HhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhc-CCCCeeeeEEEEeccccceeeeeHHHH
Confidence 478999999999999965 6889999999754321 23457899999999 89999999888764 35789999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT 492 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~ 492 (627)
+. +|...+...+ .++...++.-++.|+++|++|||... |+|||||++|+|+++.|.+||+|||+|+.++.+.
T Consensus 160 Eh-DLksl~d~m~----q~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~ 231 (419)
T KOG0663|consen 160 EH-DLKSLMETMK----QPFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL 231 (419)
T ss_pred Hh-hHHHHHHhcc----CCCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchhhhhcCCc
Confidence 87 8999998763 46888999999999999999999998 9999999999999999999999999999987652
Q ss_pred ----CCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHh--hhcccccccchh
Q 006884 493 ----TATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVV--REEWTAEVFDVE 565 (627)
Q Consensus 493 ----~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~ 565 (627)
..+.|.+|.|||.+.+ ..|++..|+||+|||+.||+++++-|.+..+-+ ++...+...- .+..........
T Consensus 232 k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~d--Ql~~If~llGtPte~iwpg~~~lp 309 (419)
T KOG0663|consen 232 KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEID--QLDKIFKLLGTPSEAIWPGYSELP 309 (419)
T ss_pred ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHH--HHHHHHHHhCCCccccCCCccccc
Confidence 2346899999999876 568999999999999999999999998765322 2222221110 000000000000
Q ss_pred ------hhcCC------ChHH--HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 566 ------LLKYQ------DVEE--EMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 566 ------l~~~~------~~~~--~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
+...+ .+.. -...-++++...+..||.+|.|+.|.+++
T Consensus 310 ~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 310 AVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred hhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 00000 0001 11344577778899999999999999874
No 81
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=3.8e-36 Score=301.02 Aligned_cols=245 Identities=24% Similarity=0.446 Sum_probs=201.5
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEeccccc-CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAA-TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
.+.||+|+||.||+|..+++..+++|.+..... ...++..|+.++..+ +|+||+++++++...+..++||||+++|+|
T Consensus 11 ~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 89 (261)
T cd05148 11 ERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRL-RHKHLISLFAVCSVGEPVYIITELMEKGSL 89 (261)
T ss_pred hhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcC-CCcchhheeeeEecCCCeEEEEeecccCCH
Confidence 578999999999999988899999999876543 466789999999999 999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC----C
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT----T 493 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~----~ 493 (627)
.+++.... +..+++..+..++.|++.|+.|||+.+ ++||||||+||+++.++.+||+|||.+....... .
T Consensus 90 ~~~~~~~~---~~~~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~ 163 (261)
T cd05148 90 LAFLRSPE---GQVLPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSD 163 (261)
T ss_pred HHHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEcCCceEEEccccchhhcCCccccccC
Confidence 99997542 346899999999999999999999998 9999999999999999999999999997664321 2
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
..++..|+|||+.....++.++||||||+++|+|++ |+.||...... ....... ..... ...
T Consensus 164 ~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~------~~~~~~~-~~~~~----------~~~ 226 (261)
T cd05148 164 KKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH------EVYDQIT-AGYRM----------PCP 226 (261)
T ss_pred CCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH------HHHHHHH-hCCcC----------CCC
Confidence 234567999999988899999999999999999998 89999754311 1111111 11000 111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~ 607 (627)
......+.+++.+||+.+|++|||+.++++.|+.+
T Consensus 227 ~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 227 AKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 22334677889999999999999999999999864
No 82
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=7.2e-36 Score=298.93 Aligned_cols=244 Identities=27% Similarity=0.463 Sum_probs=198.3
Q ss_pred HhcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 338 SAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 338 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
..+.||+|+||.||++..+++..+|+|.+.......+.+.+|++++.++ +|+|++++++++. ....+++|||+++++|
T Consensus 10 ~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L 87 (260)
T cd05070 10 LIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKL-RHDKLVQLYAVVS-EEPIYIVTEYMSKGSL 87 (260)
T ss_pred hhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhc-CCCceEEEEeEEC-CCCcEEEEEecCCCcH
Confidence 3578999999999999988888999999987655677899999999999 9999999999875 4567899999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-----
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT----- 492 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~----- 492 (627)
.++++... ...+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||.+.......
T Consensus 88 ~~~~~~~~---~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 161 (260)
T cd05070 88 LDFLKDGE---GRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQ 161 (260)
T ss_pred HHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeeeccCccccccc
Confidence 99997542 245899999999999999999999998 9999999999999999999999999997654321
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006884 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
...++..|+|||+..+..++.++||||||+++|||++ |+.||..... .+....+.... .. ..
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~------~~~~~~~~~~~-~~----------~~ 224 (260)
T cd05070 162 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN------REVLEQVERGY-RM----------PC 224 (260)
T ss_pred CCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH------HHHHHHHHcCC-CC----------CC
Confidence 1223557999999988889999999999999999999 8899975321 11111111110 00 00
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 006884 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQ 606 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~ 606 (627)
.......+.+++.+|+..+|++|||+.++.+.|++
T Consensus 225 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 225 PQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 11223467789999999999999999999999876
No 83
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2e-36 Score=303.28 Aligned_cols=244 Identities=26% Similarity=0.434 Sum_probs=198.2
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHH
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 418 (627)
.+.||+|+||.||+|...++..||+|++.......+.+.+|++++.++ +|+||+++++.+. .+..++||||+++|+|.
T Consensus 11 ~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~ 88 (262)
T cd05071 11 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVVS-EEPIYIVTEYMSKGSLL 88 (262)
T ss_pred eeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhC-CCCCcceEEEEEC-CCCcEEEEEcCCCCcHH
Confidence 467999999999999987777899999986555667899999999999 8999999998874 45678999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-----C
Q 006884 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-----T 493 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~-----~ 493 (627)
+++.... +..+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||.++...... .
T Consensus 89 ~~~~~~~---~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~ 162 (262)
T cd05071 89 DFLKGEM---GKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 162 (262)
T ss_pred HHHhhcc---ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEcCCCcEEeccCCceeeccccccccccC
Confidence 9997542 245799999999999999999999988 9999999999999999999999999997654322 1
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
..++..|+|||+..+..++.++||||||+++|||++ |+.||...... ........ ... ....
T Consensus 163 ~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~------~~~~~~~~-~~~----------~~~~ 225 (262)
T cd05071 163 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR------EVLDQVER-GYR----------MPCP 225 (262)
T ss_pred CcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH------HHHHHHhc-CCC----------CCCc
Confidence 224567999999988899999999999999999999 88888653211 11111111 000 0111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~ 607 (627)
.+....+.+++.+|++.+|++||++.++++.|++.
T Consensus 226 ~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 226 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred cccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 23345678899999999999999999999999875
No 84
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2e-36 Score=306.50 Aligned_cols=243 Identities=19% Similarity=0.273 Sum_probs=191.7
Q ss_pred cCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 342 LGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 342 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
||+|+||+||++..+ +++.||+|.+..... ..+.+..|+++++.+ +|+||+++.+++......++||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~g~ 79 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKV-HSRFIVSLAYAFQTKTDLCLVMTIMNGGD 79 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhC-CCCcEeeeeEEEcCCCeEEEEEeCCCCCC
Confidence 799999999999965 688999999865322 224567899999999 99999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC----
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT---- 492 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~---- 492 (627)
|..++..... ....+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 80 L~~~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~ 155 (280)
T cd05608 80 LRYHIYNVDE-ENPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTK 155 (280)
T ss_pred HHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccc
Confidence 9988854321 2346899999999999999999999998 9999999999999999999999999997654322
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
...+++.|+|||++.+..++.++||||||+++|||++|+.||....... ............ .. ...
T Consensus 156 ~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~---------~~---~~~ 221 (280)
T cd05608 156 GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV--ENKELKQRILND---------SV---TYP 221 (280)
T ss_pred ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch--hHHHHHHhhccc---------CC---CCc
Confidence 2357889999999999999999999999999999999999997543211 111111111100 00 001
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRP-----KMDDVVRM 603 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RP-----s~~ev~~~ 603 (627)
......+.+++.+|++.+|++|| ++++++++
T Consensus 222 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 222 DKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 12234566788899999999999 67777763
No 85
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=5.9e-36 Score=299.56 Aligned_cols=244 Identities=26% Similarity=0.478 Sum_probs=199.1
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHH
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 418 (627)
.+.||+|+||.||+|..++++.||+|.+.......+++.+|+++++++ +|+|++++++++ ..+..++++||+++|+|.
T Consensus 11 ~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~-~~~~~~~v~e~~~~~~L~ 88 (260)
T cd05067 11 VKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQL-QHPRLVRLYAVV-TQEPIYIITEYMENGSLV 88 (260)
T ss_pred eeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhc-CCcCeeeEEEEE-ccCCcEEEEEcCCCCCHH
Confidence 478999999999999988899999999987666778899999999999 899999999886 456789999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-----C
Q 006884 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-----T 493 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~-----~ 493 (627)
+++.... +..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++....... .
T Consensus 89 ~~~~~~~---~~~~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~ 162 (260)
T cd05067 89 DFLKTPE---GIKLTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREG 162 (260)
T ss_pred HHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccC
Confidence 9987542 346899999999999999999999988 9999999999999999999999999997664221 1
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
..++..|+|||++.+..++.++||||||+++||+++ |+.||..... ......... ..... ..
T Consensus 163 ~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~------~~~~~~~~~-~~~~~-------~~--- 225 (260)
T cd05067 163 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN------PEVIQNLER-GYRMP-------RP--- 225 (260)
T ss_pred CcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh------HHHHHHHHc-CCCCC-------CC---
Confidence 234568999999988889999999999999999999 9999975431 111111111 10000 00
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~ 607 (627)
.....++.+++.+|++.+|++||+++++.+.|+.+
T Consensus 226 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 260 (260)
T cd05067 226 DNCPEELYELMRLCWKEKPEERPTFEYLRSVLEDF 260 (260)
T ss_pred CCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhcC
Confidence 11223577888999999999999999999999863
No 86
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4e-37 Score=312.80 Aligned_cols=241 Identities=23% Similarity=0.369 Sum_probs=205.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCCc-eeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDE-KLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~-~~lv~e~~~ 413 (627)
.+++|+|+||.++..+.+ ++..+|+|.+..... ..+...+|+.+++++ +|||||.+.+.|.+++. .++||+|++
T Consensus 9 ~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~-~hP~iv~y~ds~~~~~~~l~Ivm~Y~e 87 (426)
T KOG0589|consen 9 LRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKL-LHPNIVEYKDSFEEDGQLLCIVMEYCE 87 (426)
T ss_pred hhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhc-cCCCeeeeccchhcCCceEEEEEeecC
Confidence 478999999999999865 678999999876543 344678999999998 99999999999999998 899999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
||++.+.+.+.+ +..+++.....++.|++.|+.|||+.. |+|||||+.||+++.++.+||+|||+|+.+...
T Consensus 88 Gg~l~~~i~~~k---~~~f~E~~i~~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~ 161 (426)
T KOG0589|consen 88 GGDLAQLIKEQK---GVLFPEERILKWFVQILLAVNYLHENR---VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDS 161 (426)
T ss_pred CCCHHHHHHHHh---hccccHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhhccccCceeecchhhhhhcCCchh
Confidence 999999998765 467899999999999999999999887 999999999999999999999999999998654
Q ss_pred --CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 492 --TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
.+..||+.||.||++.+.+|..|+|||||||++|||++-+++|...+ +...+.++.+.. + .
T Consensus 162 ~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~------m~~Li~ki~~~~-----~------~ 224 (426)
T KOG0589|consen 162 LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASN------MSELILKINRGL-----Y------S 224 (426)
T ss_pred hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccc------hHHHHHHHhhcc-----C------C
Confidence 35679999999999999999999999999999999999999998643 233333333322 1 1
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
+....+..++..++..|++.+|+.||++.+++.+
T Consensus 225 Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 225 PLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred CCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 1223445567778889999999999999999986
No 87
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=7.4e-36 Score=300.63 Aligned_cols=249 Identities=22% Similarity=0.427 Sum_probs=196.1
Q ss_pred cccCcCCceEEEEEEEcC-Cc--EEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 340 EVLGKGSYGSTYKAILED-GT--TVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~-~~--~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
+.||+|+||.||+|..++ +. .+++|.++... ...+.+..|++++.++.+||||+++++++...+..+++|||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 468999999999999764 33 46888876432 23457889999999998899999999999999999999999999
Q ss_pred CcHHHHhhhcCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecc
Q 006884 415 GSLFMLLHRNRS-----------DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVG 483 (627)
Q Consensus 415 gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG 483 (627)
|+|.+++...+. .....+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccccceEEEcCCCeEEECCCC
Confidence 999999976432 11235789999999999999999999988 9999999999999999999999999
Q ss_pred cccccCCC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccc
Q 006884 484 LAHLINFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTA 559 (627)
Q Consensus 484 ~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 559 (627)
++...... .....+..|+|||++....++.++||||||+++|||++ |..||..... ......... ....
T Consensus 158 l~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~------~~~~~~~~~-~~~~ 230 (270)
T cd05047 158 LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC------AELYEKLPQ-GYRL 230 (270)
T ss_pred CccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH------HHHHHHHhC-CCCC
Confidence 98643211 11223567999999988889999999999999999997 9999965321 111111111 1000
Q ss_pred cccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhc
Q 006884 560 EVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQ 608 (627)
Q Consensus 560 ~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~ 608 (627)
+ .......++.+++.+||..+|.+|||+.+++..|+++.
T Consensus 231 ~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 231 E----------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred C----------CCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 0 00112245778999999999999999999999999874
No 88
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=8.2e-37 Score=317.29 Aligned_cols=238 Identities=18% Similarity=0.251 Sum_probs=193.1
Q ss_pred hcccCcCCceEEEEEEEcC--CcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAILED--GTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 412 (627)
.+.||+|+||.||+|..++ +..||+|++.... ...+.+.+|++++..+ +||||+++++++.+.+..++||||+
T Consensus 35 ~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~lv~Ey~ 113 (340)
T PTZ00426 35 IRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYI-NHPFCVNLYGSFKDESYLYLVLEFV 113 (340)
T ss_pred EEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCCcceEEEEEeCCEEEEEEeCC
Confidence 4789999999999998653 3689999986432 2345678899999999 9999999999999999999999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC-
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP- 491 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~- 491 (627)
++|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 114 ~~g~L~~~i~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~ 185 (340)
T PTZ00426 114 IGGEFFTFLRRN-----KRFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRT 185 (340)
T ss_pred CCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEecCCCCeecCCCc
Confidence 999999999764 35889999999999999999999998 999999999999999999999999999876432
Q ss_pred CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006884 492 TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
.+..||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+..... .+ ...
T Consensus 186 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~------~~~~~i~~~~~---~~------p~~ 250 (340)
T PTZ00426 186 YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL------LIYQKILEGII---YF------PKF 250 (340)
T ss_pred ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH------HHHHHHhcCCC---CC------CCC
Confidence 3456899999999999888999999999999999999999999754211 11111111110 00 011
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 006884 572 VEEEMVQMLQIALSCVAKVPDSRP-----KMDDVVRM 603 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~ev~~~ 603 (627)
.. ..+.+++.+|++.+|++|+ ++++++++
T Consensus 251 ~~---~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 251 LD---NNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred CC---HHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 12 2355788899999999995 89988774
No 89
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.5e-36 Score=302.25 Aligned_cols=242 Identities=24% Similarity=0.386 Sum_probs=193.5
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
+.||+|+||.||+|+.+ +++.||+|.+.... .....+.+|++++..+ +||||+++++++......++|+||+++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIYIVMELVQGGD 79 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEcCCCCeEEEEeeccCCc
Confidence 46999999999999965 68899999876432 2346789999999999 99999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCC---
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTT--- 493 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~--- 493 (627)
|.+++... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++........
T Consensus 80 L~~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 152 (252)
T cd05084 80 FLTFLRTE----GPRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYAST 152 (252)
T ss_pred HHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCccccccccccc
Confidence 99999753 235899999999999999999999998 99999999999999999999999999875432211
Q ss_pred ---CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 494 ---ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 494 ---~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
...+..|+|||.+.+..++.++||||||+++|||++ |..||...... . ...........
T Consensus 153 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~------~-~~~~~~~~~~~---------- 215 (252)
T cd05084 153 GGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ------Q-TREAIEQGVRL---------- 215 (252)
T ss_pred CCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH------H-HHHHHHcCCCC----------
Confidence 112356999999998889999999999999999998 88888643211 0 11111110000
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQ 606 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~ 606 (627)
.........+.+++.+|+..+|++||++.++.++|++
T Consensus 216 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 216 PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 0111223467788999999999999999999998863
No 90
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=4e-36 Score=292.79 Aligned_cols=261 Identities=22% Similarity=0.347 Sum_probs=199.0
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCc-eeceeeEEeeCC------ceeE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSN-VVPVRAYYYSKD------EKLV 407 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~n-iv~~~~~~~~~~------~~~l 407 (627)
.++||+|+||+||+|+.+ +|+.||+|+++.... ......+|+.++.++ +|+| |+.+.+++...+ ..++
T Consensus 16 ~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L-~~~~~iv~L~dv~~~~~~~~~~~~l~l 94 (323)
T KOG0594|consen 16 VEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRL-SHANHIVRLHDVIHTSNNHRGIGKLYL 94 (323)
T ss_pred HHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHh-CCCcceEEEEeeeeecccccccceEEE
Confidence 366999999999999954 789999999976543 234568999999999 8999 999999999877 7889
Q ss_pred EEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccc
Q 006884 408 VYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHL 487 (627)
Q Consensus 408 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~ 487 (627)
|+||++. +|..++....... ..++...+..++.|+++||+|||+++ |+||||||.|||++++|.+||+|||+|+.
T Consensus 95 vfe~~d~-DL~~ymd~~~~~~-~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaDFGlAra 169 (323)
T KOG0594|consen 95 VFEFLDR-DLKKYMDSLPKKP-QGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLADFGLARA 169 (323)
T ss_pred EEEeecc-cHHHHHHhccccc-cCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeeccchHHH
Confidence 9999965 8999998764321 34666889999999999999999998 99999999999999999999999999997
Q ss_pred cCCC----CCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHh---hhcccc
Q 006884 488 INFP----TTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVV---REEWTA 559 (627)
Q Consensus 488 ~~~~----~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~ 559 (627)
...+ ....+|.+|.|||++.+. .|+...||||+||+++||++++.-|.+..+. .++...++..- .+.|..
T Consensus 170 ~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~--~ql~~If~~lGtP~e~~Wp~ 247 (323)
T KOG0594|consen 170 FSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEI--DQLFRIFRLLGTPNEKDWPG 247 (323)
T ss_pred hcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHH--HHHHHHHHHcCCCCccCCCC
Confidence 7533 334578999999998876 7899999999999999999999999875431 11111111000 112211
Q ss_pred ccc----chhhhcCC---ChHHH----HHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhh
Q 006884 560 EVF----DVELLKYQ---DVEEE----MVQMLQIALSCVAKVPDSRPKMDDVVRM--IEQI 607 (627)
Q Consensus 560 ~~~----d~~l~~~~---~~~~~----~~~l~~l~~~Cl~~~P~~RPs~~ev~~~--L~~~ 607 (627)
... +....... ..... .....+++.+|++.+|.+|.|++.++.+ +..+
T Consensus 248 v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 248 VSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred ccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 110 11111111 11111 1357788999999999999999999986 5555
No 91
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.3e-36 Score=314.15 Aligned_cols=237 Identities=21% Similarity=0.351 Sum_probs=191.2
Q ss_pred cccCcCCceEEEEEEE----cCCcEEEEEEecccc-----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 340 EVLGKGSYGSTYKAIL----EDGTTVVVKRLREVA-----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
+.||+|+||.||+++. .+++.||+|+++... .....+..|++++..+ +||||+++++++..++..++|||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAV-KHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhC-CCCchhceeeEEecCCeEEEEEe
Confidence 5799999999999985 257899999987532 2234577899999999 99999999999999999999999
Q ss_pred cCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC
Q 006884 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF 490 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 490 (627)
|+++|+|.+++... ..+.+..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 ~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 152 (323)
T cd05584 81 YLSGGELFMHLERE-----GIFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLCKESIH 152 (323)
T ss_pred CCCCchHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCCeeccc
Confidence 99999999998754 35788888999999999999999998 99999999999999999999999999875422
Q ss_pred C----CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhh
Q 006884 491 P----TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVEL 566 (627)
Q Consensus 491 ~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 566 (627)
. ....|++.|+|||++.+..++.++|||||||++|||++|+.||..... ......+..... . +
T Consensus 153 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~------~~~~~~~~~~~~--~-~---- 219 (323)
T cd05584 153 EGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR------KKTIDKILKGKL--N-L---- 219 (323)
T ss_pred CCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH------HHHHHHHHcCCC--C-C----
Confidence 1 234578999999999988899999999999999999999999975421 112222221110 0 0
Q ss_pred hcCCChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 006884 567 LKYQDVEEEMVQMLQIALSCVAKVPDSRP-----KMDDVVRM 603 (627)
Q Consensus 567 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~ev~~~ 603 (627)
... ....+.+++.+|++.+|++|| ++++++++
T Consensus 220 --~~~---~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 220 --PPY---LTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred --CCC---CCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 011 123566788899999999999 78888763
No 92
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=2.9e-36 Score=305.74 Aligned_cols=258 Identities=22% Similarity=0.339 Sum_probs=195.0
Q ss_pred hcccCcCCceEEEEEEE-----cCCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeC--CceeEEE
Q 006884 339 AEVLGKGSYGSTYKAIL-----EDGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSK--DEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~--~~~~lv~ 409 (627)
.+.||+|+||+||++.. .++..||+|.++.... ..+.+.+|++++.++ +||||+++++++... ...+++|
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~ 87 (283)
T cd05080 9 IRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTL-YHENIVKYKGCCSEQGGKGLQLIM 87 (283)
T ss_pred ceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCCceEEEEe
Confidence 46799999999988653 3578899999875432 456788999999999 999999999988654 3578999
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||+++|+|.+++... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 88 e~~~~~~l~~~~~~~------~l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 88 EYVPLGSLRDYLPKH------KLNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred cCCCCCCHHHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEcCCCcEEEeecccccccC
Confidence 999999999999753 4899999999999999999999998 9999999999999999999999999998664
Q ss_pred CCC-------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006884 490 FPT-------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 490 ~~~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
... ...++..|+|||...+..++.++||||||+++|||++|+.||....... .................+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd05080 159 EGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKF-EEMIGPKQGQMTVVRLIELL 237 (283)
T ss_pred CcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchh-hhhhcccccccchhhhhhhh
Confidence 321 1223556999999988889999999999999999999999986532110 00000000000000000000
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhc
Q 006884 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQ 608 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~ 608 (627)
+... ...........+.+++.+||+.+|++|||++++++.|+++.
T Consensus 238 ~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 238 ERGM-RLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hcCC-CCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 0000 00011123356788899999999999999999999999875
No 93
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=3.5e-36 Score=304.11 Aligned_cols=241 Identities=22% Similarity=0.299 Sum_probs=190.1
Q ss_pred cCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 342 LGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 342 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
||+|+||.||+++.+ +|+.||+|.+.... ...+.+..|++++.++ +||||+++.+++..+...++||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~i~~~~~~~~~~~~~~lv~e~~~g~~ 79 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKV-NSPFIVNLAYAFESKTHLCLVMSLMNGGD 79 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhc-CCCcEEEEEEEEecCCeEEEEEecCCCCC
Confidence 799999999999965 58999999986432 1234556799999999 99999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC---C
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT---T 493 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~---~ 493 (627)
|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++....... .
T Consensus 80 L~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~ 153 (277)
T cd05607 80 LKYHIYNVG---ERGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQ 153 (277)
T ss_pred HHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeec
Confidence 998886542 245889999999999999999999998 9999999999999999999999999987654322 2
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChH
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVE 573 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 573 (627)
..++..|+|||++.+..++.++||||+||++|||++|+.||....... .............. .. ...
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~--~~~~~~~~~~~~~~-----~~---~~~--- 220 (277)
T cd05607 154 RAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV--AKEELKRRTLEDEV-----KF---EHQ--- 220 (277)
T ss_pred cCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh--hHHHHHHHhhcccc-----cc---ccc---
Confidence 457889999999988889999999999999999999999997532211 11111111111110 00 001
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 574 EEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 574 ~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
....++.+++.+||+.+|++||+++|+++
T Consensus 221 ~~~~~~~~li~~~L~~~P~~R~~~~~~~~ 249 (277)
T cd05607 221 NFTEESKDICRLFLAKKPEDRLGSREKND 249 (277)
T ss_pred cCCHHHHHHHHHHhccCHhhCCCCccchh
Confidence 12234677888999999999999976653
No 94
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2.8e-37 Score=319.51 Aligned_cols=237 Identities=21% Similarity=0.318 Sum_probs=190.6
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
+.||+|+||.||++..+ +++.||+|++.... .....+..|++++..+ +||||+++.+++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~-~hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-RHPFLTALKYSFQTHDRLCFVMEYANG 79 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 36999999999999864 68899999987542 1234567788888888 999999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS-EGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
|+|..++... ..+++..+..++.|++.||.|||+ .+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 80 ~~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~ 151 (325)
T cd05594 80 GELFFHLSRE-----RVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 151 (325)
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc
Confidence 9999988754 358999999999999999999997 66 999999999999999999999999998753221
Q ss_pred --CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 492 --TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+..... .+ .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~------~~~~~i~~~~~-------~~--p 216 (325)
T cd05594 152 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE------KLFELILMEEI-------RF--P 216 (325)
T ss_pred ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH------HHHHHHhcCCC-------CC--C
Confidence 2345889999999999999999999999999999999999999754321 11111111110 00 0
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRP-----KMDDVVRM 603 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~ev~~~ 603 (627)
. ....++.+++.+|++.||++|+ ++.+++++
T Consensus 217 ~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 217 R---TLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred C---CCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 1 1123466788899999999996 89999864
No 95
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=5e-36 Score=311.00 Aligned_cols=191 Identities=21% Similarity=0.344 Sum_probs=167.2
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||++..+ ++..+|+|.+..... ....+.+|++++..+ +|+||+++++++.+++..++||||+++|
T Consensus 10 ~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 88 (333)
T cd06650 10 ISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISICMEHMDGG 88 (333)
T ss_pred eccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHC-CCCcccceeEEEEECCEEEEEEecCCCC
Confidence 478999999999999976 578899998765422 245688999999999 8999999999999999999999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--CC
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--TT 493 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--~~ 493 (627)
+|.+++... ..+++.....++.|++.||.|||+.+ .|+||||||+|||++.++.+||+|||++...... ..
T Consensus 89 ~L~~~l~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~ 161 (333)
T cd06650 89 SLDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 161 (333)
T ss_pred cHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhcccc
Confidence 999999754 34788999999999999999999752 3999999999999999999999999998765332 23
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHS 537 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~ 537 (627)
..++..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 162 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 162 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred CCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 45788999999999888999999999999999999999999753
No 96
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2e-36 Score=314.30 Aligned_cols=243 Identities=20% Similarity=0.306 Sum_probs=191.2
Q ss_pred hcccCcCCceEEEEEEEc----CCcEEEEEEecccc-----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEE
Q 006884 339 AEVLGKGSYGSTYKAILE----DGTTVVVKRLREVA-----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 409 (627)
.+.||+|+||.||+++.. +++.||+|++.... ...+.+..|++++..+.+|+||+++++++...+..++||
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (332)
T cd05614 5 LKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLIL 84 (332)
T ss_pred EEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEE
Confidence 478999999999998853 57899999986532 223567889999999977999999999999999999999
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||+++|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 85 e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~ 156 (332)
T cd05614 85 DYVSGGEMFTHLYQR-----DNFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (332)
T ss_pred eCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcCCcccc
Confidence 999999999998753 35889999999999999999999998 9999999999999999999999999997643
Q ss_pred CC-----CCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006884 490 FP-----TTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 490 ~~-----~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
.. ....||+.|+|||++.+. .++.++|||||||++|||++|+.||........ .......+... +
T Consensus 157 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~--~~~~~~~~~~~-------~ 227 (332)
T cd05614 157 SEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT--QSEVSRRILKC-------D 227 (332)
T ss_pred ccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC--HHHHHHHHhcC-------C
Confidence 22 124578999999998765 478899999999999999999999975432211 11111111111 0
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 006884 564 VELLKYQDVEEEMVQMLQIALSCVAKVPDSRP-----KMDDVVRM 603 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~ev~~~ 603 (627)
+.. . ......+.+++.+|++.||++|| ++++++++
T Consensus 228 ~~~--~---~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 228 PPF--P---SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred CCC--C---CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 000 0 11123456788899999999999 77788764
No 97
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-37 Score=311.92 Aligned_cols=256 Identities=22% Similarity=0.415 Sum_probs=211.4
Q ss_pred CCCHHHHHHHHhcccCcCCceEEEEEEEcC---C--cEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEe
Q 006884 328 NFDLEDLLRASAEVLGKGSYGSTYKAILED---G--TTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYY 400 (627)
Q Consensus 328 ~~~~~~l~~~~~~~lg~G~~g~Vy~~~~~~---~--~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~ 400 (627)
++.+..-.....++||+|-||.||+|.+.+ | -.||||..+... ...+.|.+|..+|+.+ +||||++++|.|.
T Consensus 383 nyel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnf-dHphIikLIGv~~ 461 (974)
T KOG4257|consen 383 NYELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNF-DHPHIIKLIGVCV 461 (974)
T ss_pred cceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhC-CCcchhheeeeee
Confidence 444433333457899999999999999643 2 358999887643 3467899999999999 9999999999986
Q ss_pred eCCceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEe
Q 006884 401 SKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCIS 480 (627)
Q Consensus 401 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~ 480 (627)
+ ...++|||.++.|.|..||+.++. .++.......+.|++.||+|||+.. +|||||..+|||+.....+|++
T Consensus 462 e-~P~WivmEL~~~GELr~yLq~nk~----sL~l~tL~ly~~Qi~talaYLeSkr---fVHRDIAaRNiLVsSp~CVKLa 533 (974)
T KOG4257|consen 462 E-QPMWIVMELAPLGELREYLQQNKD----SLPLRTLTLYCYQICTALAYLESKR---FVHRDIAARNILVSSPQCVKLA 533 (974)
T ss_pred c-cceeEEEecccchhHHHHHHhccc----cchHHHHHHHHHHHHHHHHHHHhhc---hhhhhhhhhheeecCcceeeec
Confidence 4 468899999999999999998753 5888899999999999999999987 9999999999999999999999
Q ss_pred ecccccccCCCCCCCC-----CccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhh
Q 006884 481 DVGLAHLINFPTTATR-----TIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVR 554 (627)
Q Consensus 481 DfG~a~~~~~~~~~~~-----t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~ 554 (627)
|||+++.+.....+.. ++.|||||.+.-++++.++|||-|||.+||++. |..||++-...|.... +.
T Consensus 534 DFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~-------iE 606 (974)
T KOG4257|consen 534 DFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGH-------IE 606 (974)
T ss_pred ccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEE-------ec
Confidence 9999999876544332 457999999999999999999999999999987 9999998665543210 00
Q ss_pred hcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006884 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 555 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 609 (627)
.+ .+.+..+.+...+..++.+||+.+|.+||.+.|+...|.++.+
T Consensus 607 nG----------eRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 607 NG----------ERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred CC----------CCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 00 1223345566778899999999999999999999999999866
No 98
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.1e-35 Score=297.61 Aligned_cols=243 Identities=27% Similarity=0.445 Sum_probs=196.7
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHH
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 418 (627)
.+.||+|++|.||++..+++..+|+|.+.......+.+.+|++++.++ +|+|++++++++. .+..+++|||+++|+|.
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~ 88 (260)
T cd05069 11 DVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKL-RHDKLVPLYAVVS-EEPIYIVTEFMGKGSLL 88 (260)
T ss_pred eeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhC-CCCCeeeEEEEEc-CCCcEEEEEcCCCCCHH
Confidence 467999999999999988777899999876555667889999999999 9999999998875 45678999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-----C
Q 006884 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-----T 493 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~-----~ 493 (627)
++++... ...+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||.++...... .
T Consensus 89 ~~~~~~~---~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~ 162 (260)
T cd05069 89 DFLKEGD---GKYLKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQG 162 (260)
T ss_pred HHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceEccCCcccccCC
Confidence 9997542 345899999999999999999999988 9999999999999999999999999997654322 1
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
..++..|+|||+..+..++.++||||||+++|||++ |+.||...... +....... .... ...
T Consensus 163 ~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~------~~~~~~~~-~~~~----------~~~ 225 (260)
T cd05069 163 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR------EVLEQVER-GYRM----------PCP 225 (260)
T ss_pred CccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHHHc-CCCC----------CCC
Confidence 224567999999988889999999999999999999 89999753211 11111111 1000 001
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQ 606 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~ 606 (627)
......+.+++.+||..+|++||+++++.+.|++
T Consensus 226 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 226 QGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred cccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 1223467788889999999999999999999986
No 99
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.2e-36 Score=316.59 Aligned_cols=249 Identities=18% Similarity=0.278 Sum_probs=189.1
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
.+.||+|+||.||++... +++.||+|... ...+.+|+++++++ +||||+++++++......++|+|++. ++|
T Consensus 97 ~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-----~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L 169 (391)
T PHA03212 97 LETFTPGAEGFAFACIDNKTCEHVVIKAGQ-----RGGTATEAHILRAI-NHPSIIQLKGTFTYNKFTCLILPRYK-TDL 169 (391)
T ss_pred EEEEcCCCCeEEEEEEECCCCCEEEEechh-----hhhhHHHHHHHHhC-CCCCCCCEeEEEEECCeeEEEEecCC-CCH
Confidence 478999999999999965 68899999653 34578899999999 99999999999999999999999985 688
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC-----CC
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF-----PT 492 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~-----~~ 492 (627)
..++... ..+++..++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.... ..
T Consensus 170 ~~~l~~~-----~~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~ 241 (391)
T PHA03212 170 YCYLAAK-----RNIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYY 241 (391)
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCcccccccccccccc
Confidence 8888653 35889999999999999999999998 99999999999999999999999999975422 12
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCC-CCCHHHHHHHHhhh-cc-----c-------
Q 006884 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDD-VVDLPRWVRSVVRE-EW-----T------- 558 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~-~~~~~~~~~~~~~~-~~-----~------- 558 (627)
...||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .......+..+... +. .
T Consensus 242 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~ 321 (391)
T PHA03212 242 GWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANL 321 (391)
T ss_pred cccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHH
Confidence 3458999999999999899999999999999999999998865432111 10111111111100 00 0
Q ss_pred cccc---------chh-hhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 559 AEVF---------DVE-LLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 559 ~~~~---------d~~-l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
...+ .+. ........+...++.+++.+||+.||++|||++|+++
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 322 DEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred HHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000 000 0000011123346778999999999999999999986
No 100
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=9.5e-36 Score=302.80 Aligned_cols=251 Identities=22% Similarity=0.427 Sum_probs=199.8
Q ss_pred hcccCcCCceEEEEEEEc------CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILE------DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||.||++... ++..+|+|.+.... ...+.+.+|++++.++ +|+||+++++++...+..++|+||
T Consensus 10 ~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~ 88 (288)
T cd05093 10 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-QHEHIVKFYGVCVEGDPLIMVFEY 88 (288)
T ss_pred ccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCccEEEEEc
Confidence 467999999999999842 34568999886543 2356789999999999 899999999999999999999999
Q ss_pred CCCCcHHHHhhhcCC--------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecc
Q 006884 412 MPAGSLFMLLHRNRS--------DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVG 483 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~--------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG 483 (627)
+++++|.+++..... .....+++..+..++.|++.||+|||+++ ++||||||+||++++++.+||+|||
T Consensus 89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg 165 (288)
T cd05093 89 MKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKIGDFG 165 (288)
T ss_pred CCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEEeccCC
Confidence 999999999975431 12235899999999999999999999998 9999999999999999999999999
Q ss_pred cccccCCCC------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhc
Q 006884 484 LAHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREE 556 (627)
Q Consensus 484 ~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 556 (627)
+++...... ...++..|+|||++.+..++.++||||||+++|||++ |+.||...... .....+.. .
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~------~~~~~i~~-~ 238 (288)
T cd05093 166 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN------EVIECITQ-G 238 (288)
T ss_pred ccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHHHc-C
Confidence 997653221 1224668999999998899999999999999999998 89998754321 11111111 1
Q ss_pred ccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 557 WTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 557 ~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
.... .. .....++.+++.+||+.+|.+|||++|+.+.|+++...
T Consensus 239 ~~~~-------~~---~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 239 RVLQ-------RP---RTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred CcCC-------CC---CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 1000 00 11223578899999999999999999999999998754
No 101
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.2e-35 Score=298.49 Aligned_cols=244 Identities=22% Similarity=0.442 Sum_probs=197.2
Q ss_pred hcccCcCCceEEEEEEEcC----CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAILED----GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 412 (627)
.+.||+|+||.||+|.++. ...||||.++.... ...+|.+|+.++..+ +||||+++++++...+..+++|||+
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~iv~e~~ 87 (266)
T cd05033 9 EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQF-DHPNIIRLEGVVTKSRPVMIITEYM 87 (266)
T ss_pred eeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhC-CCCCcceEeEEEecCCceEEEEEcC
Confidence 4789999999999999752 45799998865432 345788999999999 9999999999999999999999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT 492 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~ 492 (627)
++++|.+++.... ..+++..+.+++.|++.|+.|||+.+ |+||||||+||+++.++.++|+|||+++......
T Consensus 88 ~~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (266)
T cd05033 88 ENGSLDKFLREND----GKFTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSE 160 (266)
T ss_pred CCCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCCEEECccchhhcccccc
Confidence 9999999997642 36899999999999999999999988 9999999999999999999999999998764211
Q ss_pred ------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchh
Q 006884 493 ------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVE 565 (627)
Q Consensus 493 ------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 565 (627)
...++..|+|||.+.+..++.++||||||+++|||++ |..||...... +..... ......
T Consensus 161 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~------~~~~~~-~~~~~~------ 227 (266)
T cd05033 161 ATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ------DVIKAV-EDGYRL------ 227 (266)
T ss_pred cceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH------HHHHHH-HcCCCC------
Confidence 1123567999999998899999999999999999998 99998643211 111111 111100
Q ss_pred hhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006884 566 LLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607 (627)
Q Consensus 566 l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~ 607 (627)
.........+.+++.+|++.+|++||++.|++++|+++
T Consensus 228 ----~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 228 ----PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred ----CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 00112234577899999999999999999999999876
No 102
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=3.4e-36 Score=308.42 Aligned_cols=250 Identities=21% Similarity=0.361 Sum_probs=189.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|+.+ +++.||+|++.... .....+.+|+++++.+ +||||+++++++...+..++||||++ +
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~-~ 87 (303)
T cd07869 10 LEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGL-KHANIVLLHDIIHTKETLTLVFEYVH-T 87 (303)
T ss_pred eeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhC-CCCCcCeEEEEEecCCeEEEEEECCC-c
Confidence 467999999999999976 68899999986542 2334677899999999 99999999999999999999999995 6
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~---- 491 (627)
+|.+++.... ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 88 ~l~~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 160 (303)
T cd07869 88 DLCQYMDKHP----GGLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTY 160 (303)
T ss_pred CHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCcceeccCCCccC
Confidence 8888876542 35888999999999999999999998 999999999999999999999999998754322
Q ss_pred CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhh---h----cccc----
Q 006884 492 TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVR---E----EWTA---- 559 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~---~----~~~~---- 559 (627)
....+++.|+|||++.+ ..++.++||||+||++|||++|+.||..... .......... . .+..
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
T cd07869 161 SNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKD-----IQDQLERIFLVLGTPNEDTWPGVHSL 235 (303)
T ss_pred CCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCcc-----HHHHHHHHHHHhCCCChhhccchhhc
Confidence 23456889999999865 4578999999999999999999999975321 1111111110 0 0000
Q ss_pred cccchh-h--hcCCChHH------HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 560 EVFDVE-L--LKYQDVEE------EMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 560 ~~~d~~-l--~~~~~~~~------~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
..+++. . ........ ....+.+++.+|++.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 236 PHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred cccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 000000 0 00000111 1134668889999999999999999986
No 103
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.5e-36 Score=306.00 Aligned_cols=254 Identities=24% Similarity=0.396 Sum_probs=201.1
Q ss_pred HhcccCcCCceEEEEEEEc--------CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeE
Q 006884 338 SAEVLGKGSYGSTYKAILE--------DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLV 407 (627)
Q Consensus 338 ~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~l 407 (627)
..+.||+|+||.||+++.. ++..||+|.+.... ...+++.+|+.++..+.+||||+++++++......++
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 98 (304)
T cd05101 19 LGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 98 (304)
T ss_pred ecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEE
Confidence 3578999999999999742 24579999886542 2346788999999999889999999999999999999
Q ss_pred EEecCCCCcHHHHhhhcCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC
Q 006884 408 VYSYMPAGSLFMLLHRNRSD-----------GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN 476 (627)
Q Consensus 408 v~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~ 476 (627)
||||+++|+|.+++...+.. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.
T Consensus 99 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nili~~~~~ 175 (304)
T cd05101 99 IVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAARNVLVTENNV 175 (304)
T ss_pred EEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC---eeecccccceEEEcCCCc
Confidence 99999999999999764321 1235788999999999999999999998 999999999999999999
Q ss_pred eEEeecccccccCCCC------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHH
Q 006884 477 GCISDVGLAHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWV 549 (627)
Q Consensus 477 ~ki~DfG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~ 549 (627)
+||+|||+++...... ...++..|+|||++.+..++.++||||||+++|||++ |..||.... .....
T Consensus 176 ~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~------~~~~~ 249 (304)
T cd05101 176 MKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------VEELF 249 (304)
T ss_pred EEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC------HHHHH
Confidence 9999999998764321 1224567999999988889999999999999999998 788886432 12222
Q ss_pred HHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 550 RSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 550 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
... ....... ........+.+++.+||+.+|++||++.|+++.|+++....
T Consensus 250 ~~~-~~~~~~~----------~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~ 300 (304)
T cd05101 250 KLL-KEGHRMD----------KPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLT 300 (304)
T ss_pred HHH-HcCCcCC----------CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhh
Confidence 221 1111000 01123346777888999999999999999999999987653
No 104
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.3e-36 Score=306.47 Aligned_cols=247 Identities=25% Similarity=0.432 Sum_probs=194.9
Q ss_pred hcccCcCCceEEEEEEE-----cCCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAIL-----EDGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||.||+|.. .++..|++|.+..... ...++.+|+++++++ +||||+++++++...+..++||||
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~ 88 (283)
T cd05090 10 MEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAEL-HHPNIVCLLGVVTQEQPVCMLFEY 88 (283)
T ss_pred eeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEecCCceEEEEEc
Confidence 47899999999999984 2467899999875432 235788999999999 999999999999999999999999
Q ss_pred CCCCcHHHHhhhcCC------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEE
Q 006884 412 MPAGSLFMLLHRNRS------------DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCI 479 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~------------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki 479 (627)
+++|+|.+++..... .....+++...+.++.|++.||.|||+.+ ++||||||+||+++.++.+||
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~nili~~~~~~kl 165 (283)
T cd05090 89 LNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQLHVKI 165 (283)
T ss_pred CCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC---eehhccccceEEEcCCCcEEe
Confidence 999999999864321 01235789999999999999999999998 999999999999999999999
Q ss_pred eecccccccCCC------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHH
Q 006884 480 SDVGLAHLINFP------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSV 552 (627)
Q Consensus 480 ~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~ 552 (627)
+|||+++..... ....++..|+|||++.+..++.++||||||+++|||++ |..||.+.... . +...
T Consensus 166 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~---~----~~~~ 238 (283)
T cd05090 166 SDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ---E----VIEM 238 (283)
T ss_pred ccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH---H----HHHH
Confidence 999999765322 12234567999999988889999999999999999998 99998653211 1 1111
Q ss_pred hhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 006884 553 VREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQ 606 (627)
Q Consensus 553 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~ 606 (627)
........ ... .....+.+++.+||+.+|++||++.++.++|..
T Consensus 239 ~~~~~~~~-------~~~---~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 239 VRKRQLLP-------CSE---DCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHcCCcCC-------CCC---CCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 11111100 011 122356678889999999999999999998864
No 105
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2e-36 Score=312.09 Aligned_cols=238 Identities=26% Similarity=0.360 Sum_probs=192.0
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
+.||+|+||.||+++.+ +++.||+|+++... .....+..|.+++..+.+||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999976 57899999987542 23455677888888887899999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
|+|..++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~L~~~~~~~-----~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 152 (318)
T cd05570 81 GDLMFHIQRS-----GRFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVT 152 (318)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCCeecCcCCCc
Confidence 9999988754 35899999999999999999999998 999999999999999999999999998653211
Q ss_pred -CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 492 -TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
....+++.|+|||++.+..++.++|||||||++|||++|+.||..... ......+...... + .
T Consensus 153 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~------~~~~~~i~~~~~~---~------~- 216 (318)
T cd05570 153 TSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE------DELFQSILEDEVR---Y------P- 216 (318)
T ss_pred ccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH------HHHHHHHHcCCCC---C------C-
Confidence 223478899999999999999999999999999999999999975421 1111111111100 0 0
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHHH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRPKM-----DDVVRM 603 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~-----~ev~~~ 603 (627)
......+.+++.+||..||.+||++ .+++++
T Consensus 217 --~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 217 --RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred --CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 1122356778889999999999999 888653
No 106
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=2.9e-36 Score=318.54 Aligned_cols=252 Identities=23% Similarity=0.387 Sum_probs=198.3
Q ss_pred HhcccCcCCceEEEEEEEc------CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEE
Q 006884 338 SAEVLGKGSYGSTYKAILE------DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVY 409 (627)
Q Consensus 338 ~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 409 (627)
..+.||+|+||.||+|+++ .+..||+|+++.... ..+.+.+|++++.++..||||+++++++...+..++|+
T Consensus 41 ~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~ 120 (401)
T cd05107 41 LGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIIT 120 (401)
T ss_pred hhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEE
Confidence 4688999999999999864 246799999975432 23468899999999955999999999999999999999
Q ss_pred ecCCCCcHHHHhhhcCC---------------------------------------------------------------
Q 006884 410 SYMPAGSLFMLLHRNRS--------------------------------------------------------------- 426 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~--------------------------------------------------------------- 426 (627)
||+++|+|.+++++.+.
T Consensus 121 E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (401)
T cd05107 121 EYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVK 200 (401)
T ss_pred eccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhhhh
Confidence 99999999999976431
Q ss_pred ------------------------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC
Q 006884 427 ------------------------------DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN 476 (627)
Q Consensus 427 ------------------------------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~ 476 (627)
.....+++...+.++.|++.||.|||+.+ ++||||||+|||+++++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrdlkp~NiLl~~~~~ 277 (401)
T cd05107 201 YADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN---CVHRDLAARNVLICEGKL 277 (401)
T ss_pred hhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---cCcccCCcceEEEeCCCE
Confidence 01134678889999999999999999987 999999999999999999
Q ss_pred eEEeecccccccCCC------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHH
Q 006884 477 GCISDVGLAHLINFP------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWV 549 (627)
Q Consensus 477 ~ki~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~ 549 (627)
+||+|||+++..... ....++..|+|||.+....++.++||||||+++|||++ |..||......+ ..
T Consensus 278 ~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~------~~ 351 (401)
T cd05107 278 VKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE------QF 351 (401)
T ss_pred EEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH------HH
Confidence 999999999764321 12235678999999988889999999999999999998 889986532111 11
Q ss_pred HHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhc
Q 006884 550 RSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQ 608 (627)
Q Consensus 550 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~ 608 (627)
...+....... .. .....++.+++.+||..+|.+||++.||++.|+++.
T Consensus 352 ~~~~~~~~~~~-------~p---~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 352 YNAIKRGYRMA-------KP---AHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred HHHHHcCCCCC-------CC---CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 11111111000 00 112345677888999999999999999999999864
No 107
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-36 Score=300.23 Aligned_cols=248 Identities=21% Similarity=0.308 Sum_probs=194.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---------------CHHHHHHHHHHHHHhccCCceeceeeEEeeC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---------------TKREFEQQMEVVGTIGKHSNVVPVRAYYYSK 402 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---------------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~ 402 (627)
.+.||+|.||.|-+|+.. +++.||||++.+... ..+...+|+.+|+++ +|||||+++....+.
T Consensus 102 ~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl-~H~nVV~LiEvLDDP 180 (576)
T KOG0585|consen 102 IKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKL-HHPNVVKLIEVLDDP 180 (576)
T ss_pred hhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhc-CCcCeeEEEEeecCc
Confidence 467999999999999955 789999999854311 125788999999999 999999999998754
Q ss_pred --CceeEEEecCCCCcHHHHhhhcCCCCCCC-CCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEE
Q 006884 403 --DEKLVVYSYMPAGSLFMLLHRNRSDGGTA-LDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCI 479 (627)
Q Consensus 403 --~~~~lv~e~~~~gsL~~~l~~~~~~~~~~-l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki 479 (627)
+..|+|+||+..|.+...= . ..+ ++..++++++.++..||.|||.++ ||||||||+|+|++++|++||
T Consensus 181 ~s~~~YlVley~s~G~v~w~p----~--d~~els~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKPsNLLl~~~g~VKI 251 (576)
T KOG0585|consen 181 ESDKLYLVLEYCSKGEVKWCP----P--DKPELSEQQARKYLRDVVLGLEYLHYQG---IIHRDIKPSNLLLSSDGTVKI 251 (576)
T ss_pred ccCceEEEEEeccCCccccCC----C--CcccccHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEEcCCCcEEe
Confidence 5789999999998864221 1 233 899999999999999999999999 999999999999999999999
Q ss_pred eecccccccCCC---------CCCCCCccccCccccCCCC----CCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHH
Q 006884 480 SDVGLAHLINFP---------TTATRTIGYRAPEVTETRK----ASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLP 546 (627)
Q Consensus 480 ~DfG~a~~~~~~---------~~~~~t~~y~aPE~~~~~~----~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~ 546 (627)
+|||.+...... ....||+.|+|||.+.++. ...+.||||+||+||.|+.|+.||-+... .
T Consensus 252 sDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~------~ 325 (576)
T KOG0585|consen 252 SDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE------L 325 (576)
T ss_pred eccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH------H
Confidence 999998765211 1256899999999997743 25789999999999999999999975321 1
Q ss_pred HHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006884 547 RWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 547 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~ 612 (627)
+...+++.+ .+ .++..++....+.+++.++|.+||+.|.+..+|..+..-.+..+.
T Consensus 326 ~l~~KIvn~---------pL-~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~~ 381 (576)
T KOG0585|consen 326 ELFDKIVND---------PL-EFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDGDS 381 (576)
T ss_pred HHHHHHhcC---------cc-cCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccCCCC
Confidence 112222211 11 222333555667788889999999999999999988776665433
No 108
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.5e-36 Score=316.14 Aligned_cols=260 Identities=23% Similarity=0.351 Sum_probs=190.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCC-----ceeEEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD-----EKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~-----~~~lv~ 409 (627)
.+.||+|+||.||+|+.+ +++.||||++.... .....+.+|++++..+ +||||+++++++.... ..++||
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~~~lv~ 83 (338)
T cd07859 5 QEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPSRREFKDIYVVF 83 (338)
T ss_pred EEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhC-CCCCEeeecceEeccCCCCCceEEEEE
Confidence 468999999999999965 68999999986432 2345688999999999 9999999999886432 478999
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||+. ++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 84 e~~~-~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 84 ELME-SDLHQVIKAN-----DDLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARVAF 154 (338)
T ss_pred ecCC-CCHHHHHHhc-----ccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCccccccc
Confidence 9995 6899888753 35899999999999999999999998 9999999999999999999999999997642
Q ss_pred CC-------CCCCCCccccCccccCC--CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCC---------HHHHHHH
Q 006884 490 FP-------TTATRTIGYRAPEVTET--RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVD---------LPRWVRS 551 (627)
Q Consensus 490 ~~-------~~~~~t~~y~aPE~~~~--~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~---------~~~~~~~ 551 (627)
.. ....+++.|+|||++.+ ..++.++|||||||++|||++|+.||.......... .......
T Consensus 155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (338)
T cd07859 155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISR 234 (338)
T ss_pred cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 21 12357889999999865 678999999999999999999999997543211000 0000000
Q ss_pred Hhhhcccccccchhhh-cCCC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhcc
Q 006884 552 VVREEWTAEVFDVELL-KYQD----VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM--IEQIQQ 609 (627)
Q Consensus 552 ~~~~~~~~~~~d~~l~-~~~~----~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~--L~~~~~ 609 (627)
+. .......+..-.. .... .+.....+.+++.+||+.+|++|||++|++++ ++.+..
T Consensus 235 i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 235 VR-NEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK 298 (338)
T ss_pred hh-hhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence 00 0000000000000 0000 00112356788999999999999999999974 444443
No 109
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=8.6e-36 Score=302.29 Aligned_cols=247 Identities=23% Similarity=0.369 Sum_probs=195.2
Q ss_pred hcccCcCCceEEEEEEEcC------CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILED------GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|...+ ++.||+|++..... ..+.+.+|+.++..+ +||||+++++++...+..++++|
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l-~h~~iv~~~~~~~~~~~~~~~~e 88 (283)
T cd05091 10 MEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRL-QHPNIVCLLGVVTKEQPLSMIFS 88 (283)
T ss_pred HHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEcCCCceEEEEE
Confidence 5789999999999998642 47899999875432 235688899999998 99999999999999999999999
Q ss_pred cCCCCcHHHHhhhcCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEE
Q 006884 411 YMPAGSLFMLLHRNRS-----------DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCI 479 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki 479 (627)
|+++++|.+++..... .....+++..+.+++.|++.||.|||+.+ |+||||||+||++++++.+||
T Consensus 89 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~kl 165 (283)
T cd05091 89 YCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDKLNVKI 165 (283)
T ss_pred cCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhheEecCCCceEe
Confidence 9999999999853210 11235788999999999999999999998 999999999999999999999
Q ss_pred eecccccccCCCC------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHH
Q 006884 480 SDVGLAHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSV 552 (627)
Q Consensus 480 ~DfG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~ 552 (627)
+|||+++...... ...+++.|+|||++.+..++.++||||||+++|||++ |..||..... .++...+
T Consensus 166 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~------~~~~~~i 239 (283)
T cd05091 166 SDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN------QDVIEMI 239 (283)
T ss_pred cccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHH
Confidence 9999987653321 2234678999999988889999999999999999998 8888865321 1222222
Q ss_pred hhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 006884 553 VREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQ 606 (627)
Q Consensus 553 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~ 606 (627)
..... .. ........+.+++.+||+.+|++||++++|+..|+.
T Consensus 240 ~~~~~-~~----------~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 240 RNRQV-LP----------CPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HcCCc-CC----------CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 21111 00 011233456788899999999999999999999875
No 110
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=3.5e-36 Score=302.79 Aligned_cols=248 Identities=24% Similarity=0.361 Sum_probs=188.3
Q ss_pred ccCcCCceEEEEEEEcC---CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 341 VLGKGSYGSTYKAILED---GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 341 ~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.||+|+||.||+|...+ +..+|+|.++.... ....+.+|+.++.++ +||||+++++++.+....++||||+++|
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSL-QHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 58999999999998653 45799998865432 335788899999999 9999999999999988999999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~---- 491 (627)
+|.++++..+.......++..+..++.|++.|+.|||+.+ ++||||||+||+++.++.+||+|||.++.....
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 9999997654333345678888899999999999999998 999999999999999999999999998754322
Q ss_pred --CCCCCCccccCccccCCC-------CCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccc
Q 006884 492 --TTATRTIGYRAPEVTETR-------KASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEV 561 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~~~-------~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (627)
....++..|+|||++... .++.++||||||+++|||++ |+.||......+ ... ...... ....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~---~~~---~~~~~~-~~~~ 230 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ---VLT---YTVREQ-QLKL 230 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH---HHH---HHhhcc-cCCC
Confidence 122356789999998542 35789999999999999996 999997543211 100 011110 1111
Q ss_pred cchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 006884 562 FDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605 (627)
Q Consensus 562 ~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~ 605 (627)
.++... ......+.+++..|+ .+|++|||++||++.|+
T Consensus 231 ~~~~~~-----~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 231 PKPRLK-----LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCccC-----CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 111110 011224566778998 68999999999998874
No 111
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.4e-36 Score=317.40 Aligned_cols=190 Identities=25% Similarity=0.358 Sum_probs=167.3
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||+||++... +++.||+|++.... .....+..|++++..+ +|+||+++++.+.+....++||||++
T Consensus 6 ~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~-~~~~iv~~~~~~~~~~~~~lv~E~~~ 84 (363)
T cd05628 6 LKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEA-DSLWVVKMFYSFQDKLNLYLIMEFLP 84 (363)
T ss_pred eEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCeEEEEEcCCC
Confidence 468999999999999865 58899999987532 1234677899999999 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|.+++.+. ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 85 gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~ 156 (363)
T cd05628 85 GGDMMTLLMKK-----DTLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHR 156 (363)
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCccccccccc
Confidence 99999999754 35899999999999999999999998 999999999999999999999999998754211
Q ss_pred -------------------------------------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 006884 492 -------------------------------------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534 (627)
Q Consensus 492 -------------------------------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf 534 (627)
....||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf 236 (363)
T cd05628 157 TEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (363)
T ss_pred ccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCC
Confidence 1235889999999999999999999999999999999999999
Q ss_pred CCC
Q 006884 535 QHS 537 (627)
Q Consensus 535 ~~~ 537 (627)
...
T Consensus 237 ~~~ 239 (363)
T cd05628 237 CSE 239 (363)
T ss_pred CCC
Confidence 754
No 112
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2.6e-36 Score=301.68 Aligned_cols=238 Identities=22% Similarity=0.405 Sum_probs=191.4
Q ss_pred cccCcCCceEEEEEEEcCCc-----------EEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEE
Q 006884 340 EVLGKGSYGSTYKAILEDGT-----------TVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVV 408 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv 408 (627)
+.||+|+||.||+|...+.. .+++|.+.........+.+|+.+++.+ +||||+++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQL-SHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcC-CCcchhheeeEEec-CCcEEE
Confidence 46999999999999976433 578887765444467889999999999 89999999999988 778999
Q ss_pred EecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC-------CeEEee
Q 006884 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL-------NGCISD 481 (627)
Q Consensus 409 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~-------~~ki~D 481 (627)
+||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|
T Consensus 79 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~~~~~~~~kl~D 151 (259)
T cd05037 79 EEYVKFGPLDVFLHREK----NNVSLHWKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLNEGYVPFIKLSD 151 (259)
T ss_pred EEcCCCCcHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecCccccCCceeEEeCC
Confidence 99999999999998643 25899999999999999999999988 99999999999999888 799999
Q ss_pred cccccccCCCCCCCCCccccCccccCCC--CCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006884 482 VGLAHLINFPTTATRTIGYRAPEVTETR--KASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 482 fG~a~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
||++..........++..|+|||++.+. .++.++||||||+++|||++ |..||....... ...+. . ...
T Consensus 152 fg~a~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~---~~~~~---~-~~~- 223 (259)
T cd05037 152 PGIPITVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE---KERFY---Q-DQH- 223 (259)
T ss_pred CCcccccccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh---HHHHH---h-cCC-
Confidence 9999876654455567789999998776 78999999999999999999 577776543211 11111 0 000
Q ss_pred ccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 006884 559 AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605 (627)
Q Consensus 559 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~ 605 (627)
.. ... ....+.+++.+||..+|.+|||+.|+++.|+
T Consensus 224 -~~------~~~----~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 224 -RL------PMP----DCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred -CC------CCC----CchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 00 000 0156778999999999999999999998763
No 113
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-36 Score=295.05 Aligned_cols=264 Identities=22% Similarity=0.332 Sum_probs=198.1
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEeccc---ccCHHHHHHHHHHHHHhccCCceeceeeEEee-----CCceeEEEe
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREV---AATKREFEQQMEVVGTIGKHSNVVPVRAYYYS-----KDEKLVVYS 410 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~-----~~~~~lv~e 410 (627)
+.||+|+||.|+++..+ +|..||||++... ....++..+|+++++++ +|+||+.+.+.+.. -.+.|+|+|
T Consensus 28 ~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~-~HeNIi~l~di~~p~~~~~f~DvYiV~e 106 (359)
T KOG0660|consen 28 EPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHL-RHENIIGLLDIFRPPSRDKFNDVYLVFE 106 (359)
T ss_pred ccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHh-cCCCcceEEeecccccccccceeEEehh
Confidence 67999999999999965 6899999998744 23457788999999999 79999999998865 356899999
Q ss_pred cCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC
Q 006884 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF 490 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 490 (627)
+| .-+|...++.+ ..++......++.|+++||+|+|+.+ |+||||||.|++++.+...||+|||+|+....
T Consensus 107 lM-etDL~~iik~~-----~~L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~ 177 (359)
T KOG0660|consen 107 LM-ETDLHQIIKSQ-----QDLTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICDFGLARYLDK 177 (359)
T ss_pred HH-hhHHHHHHHcC-----ccccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEeccccceeeccc
Confidence 99 55899999864 34888889999999999999999998 99999999999999999999999999998843
Q ss_pred C------CCCCCCccccCccccC-CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHH--------HHHhhh
Q 006884 491 P------TTATRTIGYRAPEVTE-TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWV--------RSVVRE 555 (627)
Q Consensus 491 ~------~~~~~t~~y~aPE~~~-~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~--------~~~~~~ 555 (627)
. +....|.+|.|||++. ...|+...||||.|||+.||++|+.-|.+.+.-+...+.-.+ -..+..
T Consensus 178 ~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s 257 (359)
T KOG0660|consen 178 FFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRS 257 (359)
T ss_pred cCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhcc
Confidence 1 3345689999999974 578999999999999999999999999876533221111000 000000
Q ss_pred cccccccchhhhcCC--C----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHhhccccccc
Q 006884 556 EWTAEVFDVELLKYQ--D----VEEEMVQMLQIALSCVAKVPDSRPKMDDVVR--MIEQIQQPELRN 614 (627)
Q Consensus 556 ~~~~~~~d~~l~~~~--~----~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~--~L~~~~~~~~~~ 614 (627)
......+ ..+...+ . .+..-...++++.+|+..||.+|+|++|+++ -|..+...+-.+
T Consensus 258 ~~ar~yi-~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP 323 (359)
T KOG0660|consen 258 EKARPYI-KSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEP 323 (359)
T ss_pred HHHHHHH-HhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCC
Confidence 0000000 0000000 0 0112234567888999999999999999988 455555554433
No 114
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=9.4e-36 Score=303.31 Aligned_cols=251 Identities=24% Similarity=0.424 Sum_probs=199.9
Q ss_pred hcccCcCCceEEEEEEEc------CCcEEEEEEeccccc-CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILE------DGTTVVVKRLREVAA-TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||.||++... ++..+++|.+..... ..+.+.+|++++.++ +|+||+++++++...+..++||||
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~ 88 (291)
T cd05094 10 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL-QHEHIVKFYGVCGDGDPLIMVFEY 88 (291)
T ss_pred eeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcC-CCCCcceEEEEEccCCceEEEEec
Confidence 367999999999999743 345688998865432 346788999999999 999999999999999999999999
Q ss_pred CCCCcHHHHhhhcCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEe
Q 006884 412 MPAGSLFMLLHRNRS-----------DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCIS 480 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~ 480 (627)
+++++|.+++..... .....+++..+++++.|++.|+.|||+++ |+||||||+||+++.++.++|+
T Consensus 89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~ 165 (291)
T cd05094 89 MKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGANLLVKIG 165 (291)
T ss_pred CCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEEEC
Confidence 999999999975431 11235899999999999999999999998 9999999999999999999999
Q ss_pred ecccccccCCC------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHh
Q 006884 481 DVGLAHLINFP------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVV 553 (627)
Q Consensus 481 DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~ 553 (627)
|||++...... ....++..|+|||++.+..++.++||||||+++|||++ |+.||...... ......
T Consensus 166 dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~------~~~~~~- 238 (291)
T cd05094 166 DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT------EVIECI- 238 (291)
T ss_pred CCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHH-
Confidence 99999765332 12234678999999998899999999999999999999 99998654321 111111
Q ss_pred hhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 554 REEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 554 ~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
....... ........+.+++.+||+.+|++||++.+|+++|+++...
T Consensus 239 ~~~~~~~----------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 239 TQGRVLE----------RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred hCCCCCC----------CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 1111110 0011234577899999999999999999999999998653
No 115
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=3.5e-36 Score=300.67 Aligned_cols=240 Identities=23% Similarity=0.346 Sum_probs=191.7
Q ss_pred ccCcCCceEEEEEEEc---CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 341 VLGKGSYGSTYKAILE---DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 341 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.||+|+||.||+|.++ ++..+|+|+++.... ..+++..|+.++..+ +|+||+++++++. .+..++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~-~~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQL-DNPYIVRMIGICE-AESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhC-CCCCcceEEEEEc-CCCcEEEEecCCC
Confidence 5899999999999753 578899999864432 245788899999999 9999999999875 4567899999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCC-
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTT- 493 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~- 493 (627)
|+|.+++... ..+++..+.+++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 80 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~ 151 (257)
T cd05116 80 GPLNKFLQKN-----KHVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY 151 (257)
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCccccccCCCCCe
Confidence 9999999753 35899999999999999999999998 99999999999999999999999999987643221
Q ss_pred ------CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhh
Q 006884 494 ------ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVEL 566 (627)
Q Consensus 494 ------~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 566 (627)
..++..|+|||.+....++.++||||||+++|||++ |+.||...... ..... .........
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~------~~~~~-i~~~~~~~~----- 219 (257)
T cd05116 152 YKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN------EVTQM-IESGERMEC----- 219 (257)
T ss_pred eeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHH-HHCCCCCCC-----
Confidence 123468999999988889999999999999999998 99999754221 11111 111111110
Q ss_pred hcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006884 567 LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607 (627)
Q Consensus 567 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~ 607 (627)
. .....++.+++.+||+.+|++||++.+|++.|++.
T Consensus 220 --~---~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 220 --P---QRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred --C---CCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 0 11224567888999999999999999999999864
No 116
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=4e-36 Score=305.00 Aligned_cols=244 Identities=24% Similarity=0.302 Sum_probs=194.5
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||++... +++.||+|++..... ....+.+|++++.++ +|+||+++++.+..++..++||||++
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 83 (285)
T cd05605 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVLTLMN 83 (285)
T ss_pred EEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhc-CCCCEeeeeeeecCCCeEEEEEeccC
Confidence 467999999999999965 688999999865321 234577899999999 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT- 492 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~- 492 (627)
+|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||++++++.++|+|||+++......
T Consensus 84 ~~~L~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05605 84 GGDLKFHIYNMG---NPGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET 157 (285)
T ss_pred CCcHHHHHHhcC---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCceecCCCCc
Confidence 999998886432 245899999999999999999999998 9999999999999999999999999998754322
Q ss_pred --CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 493 --TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 493 --~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
...+++.|+|||++.+..++.++||||||+++|||++|+.||....... ..+.+...+..... .
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~~-----------~ 223 (285)
T cd05605 158 IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV---KREEVERRVKEDQE-----------E 223 (285)
T ss_pred cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh---HHHHHHHHhhhccc-----------c
Confidence 2357889999999998889999999999999999999999997543211 11111111111000 0
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRP-----KMDDVVRM 603 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~ev~~~ 603 (627)
........+.+++.+||..||++|| ++++++++
T Consensus 224 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 224 YSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred cCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 0111233567788999999999999 88888664
No 117
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=7.9e-36 Score=296.68 Aligned_cols=241 Identities=24% Similarity=0.419 Sum_probs=195.2
Q ss_pred cccCcCCceEEEEEEEcCCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
++||+|+||.||+|..++++.+|+|.+..... ....+.+|++++..+ +||||+++++++...+..++||||+++++|
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 79 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQY-DHPNIVKLIGVCTQRQPIYIVMELVPGGDF 79 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhC-CCCCcCeEEEEEecCCccEEEEECCCCCcH
Confidence 36999999999999988889999999865432 245688999999999 999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-----
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT----- 492 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~----- 492 (627)
.+++.... ..+++..+..++.|++.||.|+|+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 80 ~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~ 152 (250)
T cd05085 80 LSFLRKKK----DELKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSG 152 (250)
T ss_pred HHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEcCCCeEEECCCccceeccccccccCC
Confidence 99986542 35789999999999999999999998 9999999999999999999999999987653321
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006884 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
...++..|+|||++.+..++.++||||||+++||+++ |..||...... ... .......... .
T Consensus 153 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~------~~~-~~~~~~~~~~----------~ 215 (250)
T cd05085 153 LKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ------QAR-EQVEKGYRMS----------C 215 (250)
T ss_pred CCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH------HHH-HHHHcCCCCC----------C
Confidence 1123567999999998899999999999999999998 99999754221 111 1111111000 0
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 006884 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~ 605 (627)
.......+.+++.+|+..+|++||++.|+++.|.
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 216 PQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 1112346778899999999999999999999875
No 118
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=8.4e-36 Score=323.61 Aligned_cols=242 Identities=19% Similarity=0.241 Sum_probs=193.5
Q ss_pred hcccCcCCceEEEEEEEc-C-CcEEEEEEeccccc-CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-D-GTTVVVKRLREVAA-TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~-~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|... + +..||+|.+..... ....+..|++++..+ +||||+++++++...+..++||||+++|
T Consensus 72 ~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~E~~~gg 150 (478)
T PTZ00267 72 TTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAAC-DHFGIVKHFDDFKSDDKLLLIMEYGSGG 150 (478)
T ss_pred EEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEEECCEEEEEEECCCCC
Confidence 478999999999999854 3 57788887644322 235677899999999 9999999999999999999999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~---- 491 (627)
+|.++++.... ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 151 ~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~ 226 (478)
T PTZ00267 151 DLNKQIKQRLK-EHLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLD 226 (478)
T ss_pred CHHHHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCCCcEEEEeCcCceecCCccccc
Confidence 99998865321 2346889999999999999999999998 999999999999999999999999999875432
Q ss_pred --CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 492 --TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
....||++|+|||++.+..++.++|||||||++|||++|+.||..... ............. .
T Consensus 227 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~------~~~~~~~~~~~~~-~--------- 290 (478)
T PTZ00267 227 VASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ------REIMQQVLYGKYD-P--------- 290 (478)
T ss_pred cccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCCC-C---------
Confidence 234589999999999999999999999999999999999999975321 1222222211110 0
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
........+.+++.+||..+|++||++++++.
T Consensus 291 -~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 291 -FPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred -CCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 00112235677888999999999999999875
No 119
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=3.3e-36 Score=304.70 Aligned_cols=247 Identities=21% Similarity=0.362 Sum_probs=192.4
Q ss_pred hcccCcCCceEEEEEEEc-CCc----EEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILE-DGT----TVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||.||+|.+. +++ .+++|.+..... ...++..|+..+.++ .||||+++++++. ....++++||
T Consensus 12 ~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~iv~~~~~~~-~~~~~~i~e~ 89 (279)
T cd05111 12 LKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSL-DHAYIVRLLGICP-GASLQLVTQL 89 (279)
T ss_pred ccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcC-CCCCcceEEEEEC-CCccEEEEEe
Confidence 478999999999999964 344 477777754322 235677777788888 9999999999875 4567789999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 491 (627)
+++|+|.+++.... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 90 ~~~gsL~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T cd05111 90 SPLGSLLDHVRQHR----DSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADLLYPD 162 (279)
T ss_pred CCCCcHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEEcCCccceeccCC
Confidence 99999999997542 35899999999999999999999988 999999999999999999999999999765322
Q ss_pred C------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006884 492 T------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 492 ~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
. ...++..|+|||++.+..++.++||||||+++||+++ |+.||.+.... .....+....... .+
T Consensus 163 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~-------~~~~~~~~~~~~~--~~ 233 (279)
T cd05111 163 DKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH-------EVPDLLEKGERLA--QP 233 (279)
T ss_pred CcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-------HHHHHHHCCCcCC--CC
Confidence 1 2235668999999998899999999999999999998 99999754211 1111122111100 00
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
..+...+.+++.+||..+|++|||+.|+++.|..+..+.
T Consensus 234 --------~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~ 272 (279)
T cd05111 234 --------QICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDP 272 (279)
T ss_pred --------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence 012235667888999999999999999999999987543
No 120
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=9.2e-36 Score=304.27 Aligned_cols=253 Identities=23% Similarity=0.422 Sum_probs=198.2
Q ss_pred hcccCcCCceEEEEEEEcC-Cc--EEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILED-GT--TVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~-~~--~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|..++ +. .+++|.++... ...+.+.+|++++.++.+||||+++++++...+..++++||++
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~ 86 (297)
T cd05089 7 EDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAP 86 (297)
T ss_pred eeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecC
Confidence 4679999999999999753 32 47888876432 2345788999999999789999999999999999999999999
Q ss_pred CCcHHHHhhhcCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeec
Q 006884 414 AGSLFMLLHRNRSD-----------GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDV 482 (627)
Q Consensus 414 ~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~Df 482 (627)
+|+|.++++..... ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+||
T Consensus 87 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~df 163 (297)
T cd05089 87 YGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ---FIHRDLAARNVLVGENLASKIADF 163 (297)
T ss_pred CCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCcCCcceEEECCCCeEEECCc
Confidence 99999999764311 1235889999999999999999999988 999999999999999999999999
Q ss_pred ccccccCCCC---CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006884 483 GLAHLINFPT---TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 483 G~a~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
|++....... ....+..|+|||+..+..++.++|||||||++|||++ |..||..... .......... ..
T Consensus 164 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~------~~~~~~~~~~-~~ 236 (297)
T cd05089 164 GLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC------AELYEKLPQG-YR 236 (297)
T ss_pred CCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHHhcC-CC
Confidence 9986543211 1122457999999988889999999999999999997 9999975432 1112211111 00
Q ss_pred ccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 559 AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 559 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
.. .. ......+.+++.+||+.+|.+||+++++++.|+.+....
T Consensus 237 ~~-------~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 237 ME-------KP---RNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred CC-------CC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 00 00 112245678889999999999999999999999987543
No 121
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.3e-35 Score=298.19 Aligned_cols=251 Identities=20% Similarity=0.336 Sum_probs=200.9
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.. +++.||||.+.... .....+.+|+++++.+ +|||++++++++...+..++++||++
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~ 85 (267)
T cd08228 7 EKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQL-NHPNVIKYLDSFIEDNELNIVLELAD 85 (267)
T ss_pred eeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhC-CCcceeeeeeeEEECCeEEEEEEecC
Confidence 467999999999999965 68999999875422 2235688899999999 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT- 492 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~- 492 (627)
+|+|.+++..... ....+++.....++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 86 ~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~ 161 (267)
T cd08228 86 AGDLSQMIKYFKK-QKRLIPERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred CCcHHHHHHHhhh-ccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCCCCEEECccccceeccchhH
Confidence 9999998864322 1345788999999999999999999998 9999999999999999999999999988764322
Q ss_pred ---CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 493 ---TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 493 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
...+++.|+|||.+.+..++.++||||||+++|||++|+.||..... +...+........ ...
T Consensus 162 ~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~----~~~~~~~~~~~~~-~~~--------- 227 (267)
T cd08228 162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLFSLCQKIEQCD-YPP--------- 227 (267)
T ss_pred HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc----cHHHHHHHHhcCC-CCC---------
Confidence 23567889999999888899999999999999999999999864321 1122222111111 000
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhc
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQ 608 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~ 608 (627)
.........+.+++.+||+.+|++||++.+|++.|++++
T Consensus 228 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 228 LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 001223356778899999999999999999999999875
No 122
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=8.9e-36 Score=300.25 Aligned_cols=248 Identities=23% Similarity=0.392 Sum_probs=192.9
Q ss_pred hcccCcCCceEEEEEEEcCC-c--EEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeC------Ccee
Q 006884 339 AEVLGKGSYGSTYKAILEDG-T--TVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSK------DEKL 406 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~-~--~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~------~~~~ 406 (627)
.+.||+|+||.||+|++.++ . .||+|.++... ...+.+..|++++..+ +|+||+++++++... ...+
T Consensus 4 ~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~ 82 (272)
T cd05075 4 GKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEF-DHPNVMRLIGVCLQTVESEGYPSPV 82 (272)
T ss_pred ccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEccCCcccCCCCcE
Confidence 46799999999999997643 2 58999886542 2345688899999999 999999999987532 2468
Q ss_pred EEEecCCCCcHHHHhhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccc
Q 006884 407 VVYSYMPAGSLFMLLHRNRS-DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA 485 (627)
Q Consensus 407 lv~e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a 485 (627)
+++||+++|+|.+++...+. .....+++.....++.|++.||.|||+.+ |+||||||+|||+++++.+||+|||++
T Consensus 83 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 159 (272)
T cd05075 83 VILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLNENMNVCVADFGLS 159 (272)
T ss_pred EEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhheEEcCCCCEEECCCCcc
Confidence 99999999999998854321 12345899999999999999999999988 999999999999999999999999999
Q ss_pred cccCCCC------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006884 486 HLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 486 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
+...... ...+++.|+|||+..+..++.++||||||+++|||++ |+.||..... ...... ......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------~~~~~~-~~~~~~ 232 (272)
T cd05075 160 KKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN------SEIYDY-LRQGNR 232 (272)
T ss_pred cccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHH-HHcCCC
Confidence 8764321 1234567999999998899999999999999999999 8899875321 111111 111111
Q ss_pred ccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006884 559 AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607 (627)
Q Consensus 559 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~ 607 (627)
.. ........+.+++.+||+.+|++|||+.++++.|+++
T Consensus 233 ~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 233 LK----------QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CC----------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 00 0112233567889999999999999999999999875
No 123
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=3.9e-36 Score=303.24 Aligned_cols=237 Identities=22% Similarity=0.344 Sum_probs=185.8
Q ss_pred ccCcCCceEEEEEEEcC-------------------------CcEEEEEEeccccc-CHHHHHHHHHHHHHhccCCceec
Q 006884 341 VLGKGSYGSTYKAILED-------------------------GTTVVVKRLREVAA-TKREFEQQMEVVGTIGKHSNVVP 394 (627)
Q Consensus 341 ~lg~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~ 394 (627)
.||+|+||.||+|.+.. ...|++|++..... ...++.+|+.+++.+ +||||++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~ 80 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQV-SHIHLAF 80 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcC-CCCCeee
Confidence 59999999999997421 13588888865422 235677888888888 9999999
Q ss_pred eeeEEeeCCceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC
Q 006884 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD 474 (627)
Q Consensus 395 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~ 474 (627)
+++++......++||||+++|+|..++... ...+++..+..++.|+++||+|||+.+ |+||||||+||+++++
T Consensus 81 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~~ 153 (274)
T cd05076 81 VHGVCVRGSENIMVEEFVEHGPLDVCLRKE----KGRVPVAWKITVAQQLASALSYLEDKN---LVHGNVCAKNILLARL 153 (274)
T ss_pred EEEEEEeCCceEEEEecCCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHcCC---ccCCCCCcccEEEecc
Confidence 999999999999999999999999998753 235889999999999999999999988 9999999999999865
Q ss_pred C-------CeEEeecccccccCCCCCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHH-hCCCCCCCCCCCCCCCH
Q 006884 475 L-------NGCISDVGLAHLINFPTTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEML-TGKAPLQHSGHDDVVDL 545 (627)
Q Consensus 475 ~-------~~ki~DfG~a~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~-tg~~pf~~~~~~~~~~~ 545 (627)
+ .+|++|||.+..........++..|+|||.+.+ ..++.++||||||+++||++ +|+.||......+ .
T Consensus 154 ~~~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~---~ 230 (274)
T cd05076 154 GLAEGTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE---K 230 (274)
T ss_pred CcccCccceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH---H
Confidence 4 379999999876544444557788999998865 56899999999999999995 6999987543211 1
Q ss_pred HHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006884 546 PRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMI 604 (627)
Q Consensus 546 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L 604 (627)
... ...... .. ......+.+++.+||+.+|++||++.++++.|
T Consensus 231 ~~~----~~~~~~-------~~-----~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 231 ERF----YEKKHR-------LP-----EPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HHH----HHhccC-------CC-----CCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 111 111000 00 01123577888999999999999999999887
No 124
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2.2e-36 Score=319.65 Aligned_cols=242 Identities=24% Similarity=0.319 Sum_probs=188.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||+||+|+.. +++.||+|++.... ...+.+.+|++++..+ +|+||+++++++.+.+..++||||++
T Consensus 6 ~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~l~~~~~~~~~~~lv~E~~~ 84 (381)
T cd05626 6 IKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEA-DNEWVVKLYYSFQDKDNLYFVMDYIP 84 (381)
T ss_pred EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhc-CCCCeeeeEEEEecCCEEEEEEecCC
Confidence 467999999999999865 57899999986542 1235688899999999 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC---
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF--- 490 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~--- 490 (627)
+|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 85 gg~L~~~l~~~-----~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~ 156 (381)
T cd05626 85 GGDMMSLLIRM-----EVFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHN 156 (381)
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCcccccccc
Confidence 99999999754 35888999999999999999999998 99999999999999999999999999753210
Q ss_pred ------------------------------------------------CCCCCCCccccCccccCCCCCCCcchhHHHHH
Q 006884 491 ------------------------------------------------PTTATRTIGYRAPEVTETRKASQKSDVYSFGV 522 (627)
Q Consensus 491 ------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gv 522 (627)
..+..||+.|+|||++.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~ 236 (381)
T cd05626 157 SKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGV 236 (381)
T ss_pred cccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhh
Confidence 01235789999999999888999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHH--cccCCCCCCCCHHHH
Q 006884 523 LLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALS--CVAKVPDSRPKMDDV 600 (627)
Q Consensus 523 vl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~--Cl~~~P~~RPs~~ev 600 (627)
++|||++|+.||......+ ....+....... ..........+ +.+++.+ |+..+|..||+++|+
T Consensus 237 il~elltG~~Pf~~~~~~~------~~~~i~~~~~~~-----~~~~~~~~s~~---~~dli~~ll~~~~~~~~R~~~~~~ 302 (381)
T cd05626 237 ILFEMLVGQPPFLAPTPTE------TQLKVINWENTL-----HIPPQVKLSPE---AVDLITKLCCSAEERLGRNGADDI 302 (381)
T ss_pred HHHHHHhCCCCCcCCCHHH------HHHHHHcccccc-----CCCCCCCCCHH---HHHHHHHHccCcccccCCCCHHHH
Confidence 9999999999997543211 111111100000 00111112233 3444444 667777789999999
Q ss_pred HHH
Q 006884 601 VRM 603 (627)
Q Consensus 601 ~~~ 603 (627)
+++
T Consensus 303 l~h 305 (381)
T cd05626 303 KAH 305 (381)
T ss_pred hcC
Confidence 874
No 125
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=9e-36 Score=305.21 Aligned_cols=254 Identities=23% Similarity=0.424 Sum_probs=198.5
Q ss_pred hcccCcCCceEEEEEEEc-CCc--EEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGT--TVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|.++ ++. .+++|.++... ...+.+.+|++++.++.+|+||+++++++..++..++|+||++
T Consensus 12 ~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 91 (303)
T cd05088 12 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 91 (303)
T ss_pred eeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCC
Confidence 477999999999999965 344 46777766432 2345788899999999889999999999999999999999999
Q ss_pred CCcHHHHhhhcCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeec
Q 006884 414 AGSLFMLLHRNRS-----------DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDV 482 (627)
Q Consensus 414 ~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~Df 482 (627)
+|+|.++++.... .....+++..++.++.|++.|++|||+.+ ++||||||+|||++.++.+||+||
T Consensus 92 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nili~~~~~~kl~df 168 (303)
T cd05088 92 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADF 168 (303)
T ss_pred CCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEecCCCcEEeCcc
Confidence 9999999976431 11235889999999999999999999998 999999999999999999999999
Q ss_pred ccccccCCC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006884 483 GLAHLINFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 483 G~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
|+++..... .....+..|+|||++.+..++.++||||||+++|||+| |..||...... +...... ....
T Consensus 169 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------~~~~~~~-~~~~ 241 (303)
T cd05088 169 GLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA------ELYEKLP-QGYR 241 (303)
T ss_pred ccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH------HHHHHHh-cCCc
Confidence 998643221 11223567999999988889999999999999999998 99999754321 1111111 1100
Q ss_pred ccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006884 559 AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 559 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~ 612 (627)
.. .. ......+.+++.+||+.+|++||++++++..|+++...+-
T Consensus 242 ~~-------~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~ 285 (303)
T cd05088 242 LE-------KP---LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 285 (303)
T ss_pred CC-------CC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence 00 00 1122356788899999999999999999999998865543
No 126
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=2.8e-36 Score=311.79 Aligned_cols=232 Identities=23% Similarity=0.315 Sum_probs=184.5
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHH-HHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEV-VGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~-l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
+.||+|+||.||+|+.+ +++.||+|++..... ..+++..|... +..+ +||||+++++.+...+..++||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNV-KHPFLVGLHYSFQTADKLYFVLDYVN 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhC-CCCCCCCeeEEEEeCCEEEEEEcCCC
Confidence 36999999999999975 689999999865321 22345555544 4556 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC---
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF--- 490 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~--- 490 (627)
+|+|..++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 80 ~g~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 151 (323)
T cd05575 80 GGELFFHLQRE-----RSFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSK 151 (323)
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCcccccCCC
Confidence 99999998754 35889999999999999999999998 99999999999999999999999999875422
Q ss_pred -CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 491 -PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 491 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+. .+....+..... ...
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~------~~~~~~i~~~~~---------~~~ 216 (323)
T cd05575 152 TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT------AEMYDNILNKPL---------RLK 216 (323)
T ss_pred ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH------HHHHHHHHcCCC---------CCC
Confidence 1234578999999999999999999999999999999999999975421 122222221110 001
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMD 598 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ 598 (627)
.. ....+.+++.+|++.+|.+||++.
T Consensus 217 ~~---~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 217 PN---ISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CC---CCHHHHHHHHHHhhcCHHhCCCCC
Confidence 11 133566788899999999999985
No 127
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-37 Score=323.99 Aligned_cols=252 Identities=23% Similarity=0.394 Sum_probs=207.9
Q ss_pred HHHHHHhcccCcCCceEEEEEEE-cCC----cEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCce
Q 006884 333 DLLRASAEVLGKGSYGSTYKAIL-EDG----TTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEK 405 (627)
Q Consensus 333 ~l~~~~~~~lg~G~~g~Vy~~~~-~~~----~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~ 405 (627)
|.+....++||+|+||+||+|.+ ..| -+||||++.... ....++..|+.+|.++ +|||+++++|+|.... .
T Consensus 695 Etelkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masl-dHpnl~RLLgvc~~s~-~ 772 (1177)
T KOG1025|consen 695 ETELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASL-DHPNLLRLLGVCMLST-L 772 (1177)
T ss_pred hhhhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcC-CCchHHHHhhhcccch-H
Confidence 33334468999999999999985 333 468999887653 3467899999999999 9999999999998776 7
Q ss_pred eEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccc
Q 006884 406 LVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA 485 (627)
Q Consensus 406 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a 485 (627)
.+|++||+.|+|.+|++.++. .+--...+.+..|||+||.|||.+. +|||||.++|||+..-..+||.|||++
T Consensus 773 qlvtq~mP~G~LlDyvr~hr~----~igsq~lLnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVksP~hvkitdfgla 845 (1177)
T KOG1025|consen 773 QLVTQLMPLGCLLDYVREHRD----NIGSQDLLNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKSPNHVKITDFGLA 845 (1177)
T ss_pred HHHHHhcccchHHHHHHHhhc----cccHHHHHHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecCCCeEEEEecchh
Confidence 799999999999999998754 5777889999999999999999987 999999999999999999999999999
Q ss_pred cccCCCCCCC------CCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006884 486 HLINFPTTAT------RTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 486 ~~~~~~~~~~------~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
+......... ..+.|||-|.+.-..|+.++|||||||++||++| |..|+++...+++.++ ++.+.
T Consensus 846 ~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dl-------le~ge- 917 (1177)
T KOG1025|consen 846 KLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDL-------LEKGE- 917 (1177)
T ss_pred hccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHH-------Hhccc-
Confidence 9886543221 2457999999999999999999999999999999 9999987654443221 11110
Q ss_pred ccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 559 AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 559 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
+....+-+..++..++.+||..|+..||+++++...+.++..+
T Consensus 918 ---------RLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 918 ---------RLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred ---------cCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 1223345667788899999999999999999999999988544
No 128
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.1e-35 Score=297.01 Aligned_cols=242 Identities=26% Similarity=0.403 Sum_probs=194.1
Q ss_pred cccCcCCceEEEEEEEcC----CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 340 EVLGKGSYGSTYKAILED----GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
+.||+|+||.||+|.+.. +..+|+|.+..... ..+++.+|++++..+ .|+|++++++++. .+..++||||++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-~~~~~~v~e~~~ 78 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQL-DHPCIVRLIGVCK-GEPLMLVMELAP 78 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhc-CCCCeeeEEEEEc-CCceEEEEEeCC
Confidence 469999999999998542 26899999876543 456789999999999 9999999999875 456789999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCC
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTT 493 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~ 493 (627)
+|+|.+++.... .+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.......
T Consensus 79 ~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~ 150 (257)
T cd05060 79 LGPLLKYLKKRR-----EIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSD 150 (257)
T ss_pred CCcHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEeccccccceeecCCc
Confidence 999999998642 5899999999999999999999998 99999999999999999999999999986643321
Q ss_pred C-------CCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchh
Q 006884 494 A-------TRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVE 565 (627)
Q Consensus 494 ~-------~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 565 (627)
. .++..|+|||...+..++.++||||||+++||+++ |+.||...... .+..++ .......
T Consensus 151 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~---~~~~~~----~~~~~~~----- 218 (257)
T cd05060 151 YYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA---EVIAML----ESGERLP----- 218 (257)
T ss_pred ccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH---HHHHHH----HcCCcCC-----
Confidence 1 12457999999998899999999999999999998 99999754211 111111 1111100
Q ss_pred hhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhc
Q 006884 566 LLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQ 608 (627)
Q Consensus 566 l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~ 608 (627)
........+.+++.+||..+|++||++.++.+.|+++.
T Consensus 219 -----~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 219 -----RPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred -----CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 11122346778999999999999999999999999864
No 129
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=8.4e-36 Score=301.39 Aligned_cols=247 Identities=23% Similarity=0.373 Sum_probs=194.6
Q ss_pred hcccCcCCceEEEEEEEc------CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILE------DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|..+ .+..||+|++..... ...++.+|+.++..+ +|+||+++++++......++|||
T Consensus 11 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~~~~~~~~~~~~~lv~e 89 (277)
T cd05062 11 SRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF-NCHHVVRLLGVVSQGQPTLVIME 89 (277)
T ss_pred eeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCCeEEEEe
Confidence 467999999999999753 246799998864322 345688999999998 99999999999998999999999
Q ss_pred cCCCCcHHHHhhhcCCC-----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccc
Q 006884 411 YMPAGSLFMLLHRNRSD-----GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA 485 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a 485 (627)
|+++|+|.++++..+.. ....+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~~~~~l~dfg~~ 166 (277)
T cd05062 90 LMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMT 166 (277)
T ss_pred cCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEcCCCCEEECCCCCc
Confidence 99999999999754321 1234688899999999999999999988 999999999999999999999999998
Q ss_pred cccCCCC------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006884 486 HLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 486 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
+...... ...++..|+|||++.+..++.++||||||+++|||++ |..||..... ........... .
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~------~~~~~~~~~~~-~ 239 (277)
T cd05062 167 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN------EQVLRFVMEGG-L 239 (277)
T ss_pred cccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHHHcCC-c
Confidence 7653321 1234678999999998899999999999999999999 7888875422 11111111111 1
Q ss_pred ccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 006884 559 AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQ 606 (627)
Q Consensus 559 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~ 606 (627)
... .......+.+++.+|++.+|++|||+.|+++.|++
T Consensus 240 ~~~----------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 240 LDK----------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred CCC----------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 000 01123457788999999999999999999998863
No 130
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.3e-35 Score=304.70 Aligned_cols=253 Identities=27% Similarity=0.401 Sum_probs=200.1
Q ss_pred hcccCcCCceEEEEEEEc--------CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEE
Q 006884 339 AEVLGKGSYGSTYKAILE--------DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv 408 (627)
.+.||+|+||.||++... +...+|+|.+.... ....++..|++++.++.+|+||+++++++...+..++|
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 102 (307)
T cd05098 23 GKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVI 102 (307)
T ss_pred eeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 578999999999999853 23569999987542 23456888999999998899999999999999999999
Q ss_pred EecCCCCcHHHHhhhcCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCe
Q 006884 409 YSYMPAGSLFMLLHRNRSD-----------GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG 477 (627)
Q Consensus 409 ~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ 477 (627)
+||+++|+|.+++...+.. ....+++..+++++.|++.||+|||+.+ ++||||||+||+++.++.+
T Consensus 103 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill~~~~~~ 179 (307)
T cd05098 103 VEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVM 179 (307)
T ss_pred EecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHHheEEcCCCcE
Confidence 9999999999999764321 1235899999999999999999999988 9999999999999999999
Q ss_pred EEeecccccccCCCC----C--CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHH
Q 006884 478 CISDVGLAHLINFPT----T--ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVR 550 (627)
Q Consensus 478 ki~DfG~a~~~~~~~----~--~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~ 550 (627)
||+|||.++...... . ..++..|+|||++.+..++.++||||||+++|||++ |+.||.... ......
T Consensus 180 kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~------~~~~~~ 253 (307)
T cd05098 180 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------VEELFK 253 (307)
T ss_pred EECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC------HHHHHH
Confidence 999999987653211 1 123467999999988889999999999999999998 888886432 111111
Q ss_pred HHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 551 SVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 551 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
. .......+ .......++.+++.+||..+|++||++.++++.|+++....
T Consensus 254 ~-~~~~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~ 303 (307)
T cd05098 254 L-LKEGHRMD----------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALT 303 (307)
T ss_pred H-HHcCCCCC----------CCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHh
Confidence 1 11111100 11122346777889999999999999999999999987653
No 131
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=3.3e-36 Score=306.45 Aligned_cols=254 Identities=23% Similarity=0.350 Sum_probs=187.7
Q ss_pred hcccCcCCceEEEEEEEc--CCcEEEEEEeccccc---CHHHHHHHHHHHHHhc--cCCceeceeeEEee-----CCcee
Q 006884 339 AEVLGKGSYGSTYKAILE--DGTTVVVKRLREVAA---TKREFEQQMEVVGTIG--KHSNVVPVRAYYYS-----KDEKL 406 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~--~h~niv~~~~~~~~-----~~~~~ 406 (627)
.+.||+|+||.||+|+.. +++.||+|+++.... ....+.+|++++..+. +||||+++++++.. ....+
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~ 85 (290)
T cd07862 6 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 85 (290)
T ss_pred eeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEE
Confidence 467999999999999863 467899998864322 2345667887777764 69999999998852 34578
Q ss_pred EEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccc
Q 006884 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH 486 (627)
Q Consensus 407 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 486 (627)
+|+||++ ++|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 86 lv~e~~~-~~l~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T cd07862 86 LVFEHVD-QDLTTYLDKVP---EPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLAR 158 (290)
T ss_pred EEEccCC-CCHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCCCEEEccccceE
Confidence 9999996 68999987543 235899999999999999999999998 9999999999999999999999999997
Q ss_pred ccCCC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHh----hhcccc
Q 006884 487 LINFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVV----REEWTA 559 (627)
Q Consensus 487 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~----~~~~~~ 559 (627)
..... ....+++.|+|||++.+..++.++|||||||++|||++|+.||......+ ....+.... ...+..
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~---~~~~i~~~~~~~~~~~~~~ 235 (290)
T cd07862 159 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD---QLGKILDVIGLPGEEDWPR 235 (290)
T ss_pred eccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH---HHHHHHHHhCCCChhhchh
Confidence 65432 23457889999999988899999999999999999999999998643211 111110000 000000
Q ss_pred cc-cc-hhhh--cCCCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 560 EV-FD-VELL--KYQDV----EEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 560 ~~-~d-~~l~--~~~~~----~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.. .. ..+. ..... +.....+.+++.+|++.+|++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 236 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 00 00 0000 00000 112234567889999999999999999985
No 132
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.3e-37 Score=300.71 Aligned_cols=264 Identities=20% Similarity=0.314 Sum_probs=194.9
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCc-----eeEEEecCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDE-----KLVVYSYMP 413 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~-----~~lv~e~~~ 413 (627)
+++|+|+||.||+|... ++..||||+.-... +--.+|+++|+.+ .|||||++..+|....+ ..+|+|||+
T Consensus 30 ~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~---r~knrEl~im~~l-~HpNIV~L~~~f~~~~~~d~~~lnlVleymP 105 (364)
T KOG0658|consen 30 RLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK---RYKNRELQIMRKL-DHPNIVRLLYFFSSSTESDEVYLNLVLEYMP 105 (364)
T ss_pred EEEeecccceEEEEEEcCCCceeEEEEecCCC---CcCcHHHHHHHhc-CCcCeeeEEEEEEecCCCchhHHHHHHHhch
Confidence 78999999999999965 57899999875432 2335678889988 99999999988875432 357999997
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC-CCeEEeecccccccCCCC
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD-LNGCISDVGLAHLINFPT 492 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~-~~~ki~DfG~a~~~~~~~ 492 (627)
. +|.++++... .....++...+.-+..|+.+||.|||+.+ |+||||||.|+|+|.+ |.+||||||.|+.+....
T Consensus 106 ~-tL~~~~r~~~-~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~e 180 (364)
T KOG0658|consen 106 E-TLYRVIRHYT-RANQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGE 180 (364)
T ss_pred H-HHHHHHHHHh-hcCCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCCcceeeccCC
Confidence 7 8999988531 12345777778889999999999999988 9999999999999987 999999999999875443
Q ss_pred ---CCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhh-------hc--ccc
Q 006884 493 ---TATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVR-------EE--WTA 559 (627)
Q Consensus 493 ---~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~-------~~--~~~ 559 (627)
++.-|..|+|||.+.+ ..|+.+.||||.|||+.||+-|++-|.+.+.. .++...++-.-. .. ...
T Consensus 181 pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~--dQL~eIik~lG~Pt~e~I~~mn~~y~ 258 (364)
T KOG0658|consen 181 PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSV--DQLVEIIKVLGTPTREDIKSMNPNYT 258 (364)
T ss_pred CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHH--HHHHHHHHHhCCCCHHHHhhcCcccc
Confidence 3345778999999876 57999999999999999999999999875432 222222221100 00 000
Q ss_pred cccchhhhcCC----ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHhhccccccc
Q 006884 560 EVFDVELLKYQ----DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR--MIEQIQQPELRN 614 (627)
Q Consensus 560 ~~~d~~l~~~~----~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~--~L~~~~~~~~~~ 614 (627)
+...+.+.... .......+.++++.+++..+|.+|.++.|++. ...+++....+-
T Consensus 259 ~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~~~~l 319 (364)
T KOG0658|consen 259 EFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDPNTKL 319 (364)
T ss_pred cccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCcCccC
Confidence 11111111111 11233456778889999999999999999986 577777664443
No 133
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.8e-35 Score=301.43 Aligned_cols=250 Identities=28% Similarity=0.444 Sum_probs=198.7
Q ss_pred hcccCcCCceEEEEEEEcC------CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILED------GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||++...+ ...+|+|.+..... ...++.+|++++.++.+|+||+++++++..++..+++||
T Consensus 17 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e 96 (293)
T cd05053 17 GKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVE 96 (293)
T ss_pred eeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEE
Confidence 4789999999999998642 35799998875422 234688899999999789999999999999999999999
Q ss_pred cCCCCcHHHHhhhcCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEE
Q 006884 411 YMPAGSLFMLLHRNRS-----------DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCI 479 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki 479 (627)
|+++|+|.++++.... .....+++..+++++.|++.||+|||+.+ |+||||||+||++++++.+||
T Consensus 97 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~Nil~~~~~~~kL 173 (293)
T cd05053 97 YAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK---CIHRDLAARNVLVTEDHVMKI 173 (293)
T ss_pred eCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---ccccccceeeEEEcCCCeEEe
Confidence 9999999999975321 22456899999999999999999999988 999999999999999999999
Q ss_pred eecccccccCCCC------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHH
Q 006884 480 SDVGLAHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSV 552 (627)
Q Consensus 480 ~DfG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~ 552 (627)
+|||.++...... ...++..|+|||++.+..++.++|||||||++||+++ |..||...... +... .
T Consensus 174 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~------~~~~-~ 246 (293)
T cd05053 174 ADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE------ELFK-L 246 (293)
T ss_pred CccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH------HHHH-H
Confidence 9999998764321 1223567999999988899999999999999999998 88998653211 1111 1
Q ss_pred hhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhc
Q 006884 553 VREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQ 608 (627)
Q Consensus 553 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~ 608 (627)
....... .........+.+++.+|+..+|++|||+.|+++.|+.+.
T Consensus 247 ~~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 247 LKEGYRM----------EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHcCCcC----------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 1111100 001122346778999999999999999999999999874
No 134
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.8e-35 Score=295.54 Aligned_cols=241 Identities=20% Similarity=0.357 Sum_probs=191.2
Q ss_pred ccCcCCceEEEEEEEc---CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 341 VLGKGSYGSTYKAILE---DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 341 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.||+|+||.||+|.+. ++..||+|++..... ..+++.+|+++++++ +|+||+++++++. .+..++||||+++|
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l-~h~~ii~~~~~~~-~~~~~lv~e~~~~~ 79 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQL-DNPYIVRMIGVCE-AEALMLVMEMASGG 79 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhc-CCCCeEEEEEEEc-CCCeEEEEEeCCCC
Confidence 3899999999999864 355799998865432 245688999999999 9999999999875 45788999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCC--
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTT-- 493 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~-- 493 (627)
+|.+++.... ..+++..+++++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++.......
T Consensus 80 ~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 152 (257)
T cd05115 80 PLNKFLSGKK----DEITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYY 152 (257)
T ss_pred CHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCccccccCCccce
Confidence 9999987532 35899999999999999999999998 99999999999999999999999999976533211
Q ss_pred -----CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006884 494 -----ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 494 -----~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
..++..|+|||++....++.++||||||+++||+++ |+.||...... .... .+.......
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~------~~~~-~~~~~~~~~------- 218 (257)
T cd05115 153 KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP------EVMS-FIEQGKRLD------- 218 (257)
T ss_pred eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH------HHHH-HHHCCCCCC-------
Confidence 112467999999988889999999999999999996 99999754221 1111 111111100
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006884 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~ 607 (627)
.......++.+++.+||..+|++||++.+|.+.|+.+
T Consensus 219 ---~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 219 ---CPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred ---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 0112234667788999999999999999999999875
No 135
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=9.3e-37 Score=314.71 Aligned_cols=233 Identities=21% Similarity=0.340 Sum_probs=188.7
Q ss_pred cccCcCCceEEEEEEE----cCCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecC
Q 006884 340 EVLGKGSYGSTYKAIL----EDGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYM 412 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 412 (627)
+.||+|+||.||+++. .+|+.||+|++..... ....+..|++++.++ +||||+++++++...+..++||||+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 80 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEV-NHPFIVKLHYAFQTEGKLYLILDFL 80 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhC-CCCCcccEEEEEEcCCEEEEEEcCC
Confidence 5799999999999874 3578999999875432 334567899999999 9999999999999999999999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC-
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP- 491 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~- 491 (627)
++|+|.+++.+. ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~ 152 (318)
T cd05582 81 RGGDLFTRLSKE-----VMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 152 (318)
T ss_pred CCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCCcccCCCC
Confidence 999999998753 35899999999999999999999998 999999999999999999999999998765432
Q ss_pred ---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006884 492 ---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 492 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
....|++.|+|||++.+..++.++||||||+++|||++|+.||..... ......+...... .
T Consensus 153 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~------~~~~~~i~~~~~~---------~ 217 (318)
T cd05582 153 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR------KETMTMILKAKLG---------M 217 (318)
T ss_pred CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH------HHHHHHHHcCCCC---------C
Confidence 234578899999999988899999999999999999999999975321 1111221111100 0
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 006884 569 YQDVEEEMVQMLQIALSCVAKVPDSRPKMDD 599 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~e 599 (627)
.. .....+.+++.+||+.+|++||++.+
T Consensus 218 p~---~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 218 PQ---FLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CC---CCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 01 11234567888999999999999544
No 136
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.1e-35 Score=301.54 Aligned_cols=252 Identities=25% Similarity=0.421 Sum_probs=192.9
Q ss_pred hcccCcCCceEEEEEEEc-----CCcEEEEEEeccccc-CHHHHHHHHHHHHHhccCCceeceeeEEeeC--CceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILE-----DGTTVVVKRLREVAA-TKREFEQQMEVVGTIGKHSNVVPVRAYYYSK--DEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~--~~~~lv~e 410 (627)
.+.||+|+||.||++..+ ++..||+|++..... ..+.+.+|++++..+ +||||+++.+++... ...++|+|
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e 87 (284)
T cd05081 9 IQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGRRNLRLVME 87 (284)
T ss_pred eeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCCeeEEEEEEccCCCCceEEEEE
Confidence 477999999999999743 578999999865432 346789999999999 999999999987543 46789999
Q ss_pred cCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC
Q 006884 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF 490 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 490 (627)
|+++|+|.+++...+ ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++....
T Consensus 88 ~~~~~~L~~~l~~~~----~~l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~ 160 (284)
T cd05081 88 YLPYGSLRDYLQKHR----ERLDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVESENRVKIGDFGLTKVLPQ 160 (284)
T ss_pred ecCCCCHHHHHHhcC----cCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCCCeEEECCCcccccccC
Confidence 999999999997542 35899999999999999999999998 99999999999999999999999999987643
Q ss_pred CCC-------CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCC---------CCHHHHHHHHhh
Q 006884 491 PTT-------ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDV---------VDLPRWVRSVVR 554 (627)
Q Consensus 491 ~~~-------~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~---------~~~~~~~~~~~~ 554 (627)
... ..++..|+|||+..+..++.++||||||+++|||++|..|+......-. ............
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T cd05081 161 DKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLK 240 (284)
T ss_pred CCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHh
Confidence 221 1123459999999888899999999999999999998776543211000 000000000010
Q ss_pred hcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhc
Q 006884 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQ 608 (627)
Q Consensus 555 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~ 608 (627)
... ...........+.+++.+||..+|++|||++|+++.|++++
T Consensus 241 ~~~----------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 241 NNG----------RLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred cCC----------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 000 00011122345778889999999999999999999999864
No 137
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=4.7e-36 Score=310.15 Aligned_cols=238 Identities=24% Similarity=0.341 Sum_probs=189.9
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.+ +++.||+|++..... ..+.+..|.+++..+.+|++|+.+.+++...+..++||||++
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~ 84 (323)
T cd05616 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVN 84 (323)
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCC
Confidence 467999999999999966 578999999875421 234566777888877689999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC---
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF--- 490 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~--- 490 (627)
+|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 85 ~g~L~~~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~ 156 (323)
T cd05616 85 GGDLMYQIQQV-----GRFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGV 156 (323)
T ss_pred CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCceecCCCCC
Confidence 99999998754 35889999999999999999999998 99999999999999999999999999875432
Q ss_pred -CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 491 -PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 491 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+..... .+ .
T Consensus 157 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~------~~~~~i~~~~~---~~------p 221 (323)
T cd05616 157 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED------ELFQSIMEHNV---AY------P 221 (323)
T ss_pred ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCC---CC------C
Confidence 12345789999999999999999999999999999999999999754321 11111111110 00 0
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKM-----DDVVR 602 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~-----~ev~~ 602 (627)
.....++.+++.+|++.+|++|++. .++.+
T Consensus 222 ---~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~ 256 (323)
T cd05616 222 ---KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 256 (323)
T ss_pred ---CcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhc
Confidence 1122356678889999999999985 56654
No 138
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=2.1e-35 Score=295.25 Aligned_cols=245 Identities=29% Similarity=0.476 Sum_probs=199.3
Q ss_pred cccCcCCceEEEEEEEcC----CcEEEEEEecccccC--HHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 340 EVLGKGSYGSTYKAILED----GTTVVVKRLREVAAT--KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~--~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
+.||+|+||.||++.... +..|++|.+...... .+.+.+|++.+..+ +|+|++++++++......++|+||++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~ 79 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKL-GHPNVVRLLGVCTEEEPLYLVLEYME 79 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhc-CCCChheeeeeecCCCceEEEEEecc
Confidence 469999999999999763 788999998765433 57889999999999 69999999999999999999999999
Q ss_pred CCcHHHHhhhcCCC----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006884 414 AGSLFMLLHRNRSD----GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 414 ~gsL~~~l~~~~~~----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
+++|.+++...... ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||.+....
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 156 (262)
T cd00192 80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVGEDLVVKISDFGLSRDVY 156 (262)
T ss_pred CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEECCCCcEEEcccccccccc
Confidence 99999999864211 1256899999999999999999999988 9999999999999999999999999998765
Q ss_pred CC------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006884 490 FP------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 490 ~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
.. ....++..|+|||.+....++.++||||+|+++|||++ |..||..... ......... ....
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~------~~~~~~~~~-~~~~--- 226 (262)
T cd00192 157 DDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN------EEVLEYLRK-GYRL--- 226 (262)
T ss_pred cccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH------HHHHHHHHc-CCCC---
Confidence 42 22345778999999988889999999999999999999 6999976421 111111111 1000
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 006884 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~ 605 (627)
........++.+++.+|++.+|++|||+.|++++|+
T Consensus 227 -------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 227 -------PKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred -------CCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 011122356778899999999999999999999874
No 139
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=5.9e-36 Score=301.14 Aligned_cols=248 Identities=25% Similarity=0.362 Sum_probs=186.0
Q ss_pred ccCcCCceEEEEEEEcC---CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 341 VLGKGSYGSTYKAILED---GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 341 ~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.||+|+||.||+|...+ ...+++|.+..... ....+.+|++.++.+ +|+||+++++.+......++||||+++|
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l-~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYREL-NHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhC-CCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 58999999999997543 34688887754322 245678899999988 9999999999999999999999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~---- 491 (627)
+|.+++...+.......++.....++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEeccccccccccchhee
Confidence 9999998764333344578888999999999999999998 999999999999999999999999998654221
Q ss_pred --CCCCCCccccCccccCC-------CCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccc
Q 006884 492 --TTATRTIGYRAPEVTET-------RKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEV 561 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~~-------~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (627)
....++..|+|||+... ..++.++||||||+++|||++ |..||...... ........... ...
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~------~~~~~~~~~~~-~~~ 230 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE------QVLKQVVREQD-IKL 230 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH------HHHHHHhhccC-ccC
Confidence 12234567999998642 356889999999999999999 77888643211 11111121111 111
Q ss_pred cchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 006884 562 FDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605 (627)
Q Consensus 562 ~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~ 605 (627)
.++.. .......+.+++..|| .+|++|||+++|++.|.
T Consensus 231 ~~~~~-----~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 231 PKPQL-----DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCCcc-----cccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 11111 1112234455677888 59999999999999873
No 140
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=3.1e-36 Score=311.61 Aligned_cols=238 Identities=23% Similarity=0.333 Sum_probs=187.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhc--cCCceeceeeEEeeCCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIG--KHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~--~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||.||++..+ +++.||||+++... ...+.+..|++++..+. +||||+++++++...+..++||||
T Consensus 4 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~ 83 (324)
T cd05589 4 LAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEY 83 (324)
T ss_pred EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcC
Confidence 367999999999999965 68999999987542 12345666666554332 799999999999999999999999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC-
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF- 490 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~- 490 (627)
+++|+|..+++. ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 84 ~~~~~L~~~~~~------~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05589 84 AAGGDLMMHIHT------DVFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF 154 (324)
T ss_pred CCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCCccCCCC
Confidence 999999988764 25899999999999999999999998 99999999999999999999999999875322
Q ss_pred ---CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006884 491 ---PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 491 ---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
.....|++.|+|||++.+..++.++|||||||++|||++|+.||...... .....+...... +
T Consensus 155 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~------~~~~~i~~~~~~---~----- 220 (324)
T cd05589 155 GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE------EVFDSIVNDEVR---Y----- 220 (324)
T ss_pred CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCCC---C-----
Confidence 22345789999999999989999999999999999999999999754321 112222111100 0
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 006884 568 KYQDVEEEMVQMLQIALSCVAKVPDSRP-----KMDDVVRM 603 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~ev~~~ 603 (627)
.. .....+.+++.+||+.+|.+|| ++.+++++
T Consensus 221 -p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 221 -PR---FLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred -CC---CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 01 1123466788899999999999 56776663
No 141
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.9e-35 Score=290.32 Aligned_cols=249 Identities=21% Similarity=0.340 Sum_probs=201.8
Q ss_pred CCHHHHHHHHhcccCcCCceEEEEEEEcC-CcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCC
Q 006884 329 FDLEDLLRASAEVLGKGSYGSTYKAILED-GTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD 403 (627)
Q Consensus 329 ~~~~~l~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~ 403 (627)
+.+.++. ..+.||.|.-|+||++++++ +..+|+|++.+... ...+.+.|.+|++.+ .||.+..+++.++.++
T Consensus 74 l~l~~f~--llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~l-DHPFlPTLYa~fet~~ 150 (459)
T KOG0610|consen 74 LGLRHFR--LLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLL-DHPFLPTLYASFETDK 150 (459)
T ss_pred cCHHHHH--HHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhc-CCCccchhhheeeccc
Confidence 4555552 34789999999999999874 58999999976532 234677788999999 9999999999999999
Q ss_pred ceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecc
Q 006884 404 EKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVG 483 (627)
Q Consensus 404 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG 483 (627)
..+++||||+||+|....+++. +..++...++.++..|+.||+|||-.| ||+|||||+|||+.++|++.|+||.
T Consensus 151 ~~cl~meyCpGGdL~~LrqkQp---~~~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFD 224 (459)
T KOG0610|consen 151 YSCLVMEYCPGGDLHSLRQKQP---GKRFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFD 224 (459)
T ss_pred eeEEEEecCCCccHHHHHhhCC---CCccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeecc
Confidence 9999999999999999998764 578999999999999999999999999 9999999999999999999999999
Q ss_pred cccccCC---------------------------------C---------------------------CCCCCCccccCc
Q 006884 484 LAHLINF---------------------------------P---------------------------TTATRTIGYRAP 503 (627)
Q Consensus 484 ~a~~~~~---------------------------------~---------------------------~~~~~t~~y~aP 503 (627)
++..... . ...+||-.|+||
T Consensus 225 LS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAP 304 (459)
T KOG0610|consen 225 LSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAP 304 (459)
T ss_pred ccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccc
Confidence 8643200 0 012367789999
Q ss_pred cccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHH
Q 006884 504 EVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIA 583 (627)
Q Consensus 504 E~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~ 583 (627)
|++.+...+.++|+|+|||++|||+.|+-||.+.+..+.. ..++... + .++..++......+||
T Consensus 305 EvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl------~NIv~~~---------l-~Fp~~~~vs~~akDLI 368 (459)
T KOG0610|consen 305 EVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETL------RNIVGQP---------L-KFPEEPEVSSAAKDLI 368 (459)
T ss_pred eeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhH------HHHhcCC---------C-cCCCCCcchhHHHHHH
Confidence 9999999999999999999999999999999987654321 1222111 0 1222234445677888
Q ss_pred HHcccCCCCCCCC----HHHHHH
Q 006884 584 LSCVAKVPDSRPK----MDDVVR 602 (627)
Q Consensus 584 ~~Cl~~~P~~RPs----~~ev~~ 602 (627)
++.|.+||.+|-- ++||.+
T Consensus 369 r~LLvKdP~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 369 RKLLVKDPSKRLGSKRGAAEIKR 391 (459)
T ss_pred HHHhccChhhhhccccchHHhhc
Confidence 8999999999988 788765
No 142
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=2.9e-36 Score=315.51 Aligned_cols=241 Identities=20% Similarity=0.329 Sum_probs=194.6
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.. +++.||||+++... .....+..|++++..+ +|+||+++++++.+++..++||||++
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~ 84 (350)
T cd05573 6 IKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADA-DSPWIVKLYYSFQDEEHLYLVMEYMP 84 (350)
T ss_pred EEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhc-CCCCccchhhheecCCeEEEEEcCCC
Confidence 467999999999999976 68999999987542 2345688899999999 89999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT- 492 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~- 492 (627)
+|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 85 ~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~ 156 (350)
T cd05573 85 GGDLMNLLIRK-----DVFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKD 156 (350)
T ss_pred CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCccCcccCc
Confidence 99999999764 35889999999999999999999988 9999999999999999999999999997654322
Q ss_pred --------------------------------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCC
Q 006884 493 --------------------------------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHD 540 (627)
Q Consensus 493 --------------------------------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~ 540 (627)
...||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~ 236 (350)
T cd05573 157 REYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ 236 (350)
T ss_pred ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH
Confidence 234788999999999999999999999999999999999999754311
Q ss_pred CCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCC-HHHHHHH
Q 006884 541 DVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPK-MDDVVRM 603 (627)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs-~~ev~~~ 603 (627)
.....+... .... .+..... ....+.+++.+|+. +|.+||+ +++++++
T Consensus 237 ------~~~~~i~~~--~~~~---~~p~~~~---~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 237 ------ETYNKIINW--KESL---RFPPDPP---VSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred ------HHHHHHhcc--CCcc---cCCCCCC---CCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 111111110 0000 0000111 23456677789997 9999999 9999875
No 143
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.4e-35 Score=301.96 Aligned_cols=250 Identities=26% Similarity=0.408 Sum_probs=197.4
Q ss_pred hcccCcCCceEEEEEEEc------CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILE------DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|+.. ....+++|.+..... ..+.+.+|++++..+ +||||+++++.+...+..++++|
T Consensus 5 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e 83 (290)
T cd05045 5 GKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQV-NHPHVIKLYGACSQDGPLLLIVE 83 (290)
T ss_pred cccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhC-CCCCEeeEEEEEecCCCcEEEEE
Confidence 467999999999999853 235688888765432 235688899999999 99999999999999999999999
Q ss_pred cCCCCcHHHHhhhcCC-------------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe
Q 006884 411 YMPAGSLFMLLHRNRS-------------------DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL 471 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~-------------------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl 471 (627)
|+++|+|.+++...+. .....+++..++.++.|++.||.|||+.+ ++||||||+||++
T Consensus 84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---ivH~dikp~nill 160 (290)
T cd05045 84 YAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK---LVHRDLAARNVLV 160 (290)
T ss_pred ecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC---eehhhhhhheEEE
Confidence 9999999999875321 11235789999999999999999999988 9999999999999
Q ss_pred cCCCCeEEeecccccccCCCC------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCC
Q 006884 472 TQDLNGCISDVGLAHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVD 544 (627)
Q Consensus 472 ~~~~~~ki~DfG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~ 544 (627)
++++.+||+|||+++...... ...++..|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus 161 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~----- 235 (290)
T cd05045 161 AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP----- 235 (290)
T ss_pred cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH-----
Confidence 999999999999997653221 1234568999999988889999999999999999998 9999965321
Q ss_pred HHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006884 545 LPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 609 (627)
.+ +........... .......++.+++.+|++.+|++||++.|+++.|+++..
T Consensus 236 -~~-~~~~~~~~~~~~----------~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 236 -ER-LFNLLKTGYRME----------RPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred -HH-HHHHHhCCCCCC----------CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 11 111111111000 011123467788899999999999999999999999854
No 144
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-37 Score=290.46 Aligned_cols=241 Identities=24% Similarity=0.354 Sum_probs=205.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
.++||+|+||.||++.++ .|+.+|||.+.. ..+.+++..|+.+|+.. +.|++|+++|.|.....+++|||||-.|++
T Consensus 38 ~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV-~sDLQEIIKEISIMQQC-~S~yVVKYYGSYFK~sDLWIVMEYCGAGSi 115 (502)
T KOG0574|consen 38 VGKLGEGSYGSVHKAIHRESGHVLAIKKVPV-DTDLQEIIKEISIMQQC-KSKYVVKYYGSYFKHSDLWIVMEYCGAGSI 115 (502)
T ss_pred HHHhcCCcchHHHHHHHhccCcEEEEEecCc-cchHHHHHHHHHHHHHc-CCchhhhhhhhhccCCceEeehhhcCCCcH
Confidence 578999999999999965 699999998753 44678899999999998 999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC----CCC
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF----PTT 493 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~----~~~ 493 (627)
.+.++..+ .++++.+...++...+.||+|||... -+|||||+.|||++.+|.+|++|||.|..+.. ..+
T Consensus 116 SDI~R~R~----K~L~E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNT 188 (502)
T KOG0574|consen 116 SDIMRARR----KPLSEQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNT 188 (502)
T ss_pred HHHHHHhc----CCccHHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCc
Confidence 99998653 57999999999999999999999986 89999999999999999999999999987753 356
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChH
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVE 573 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 573 (627)
..||+-|||||++..-.|+.++||||+|++..||..|++||.....-.... -+....-..+...+
T Consensus 189 VIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIF---------------MIPT~PPPTF~KPE 253 (502)
T KOG0574|consen 189 VIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIF---------------MIPTKPPPTFKKPE 253 (502)
T ss_pred cccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeE---------------eccCCCCCCCCChH
Confidence 679999999999999999999999999999999999999997543211000 00011112344566
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 574 EEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 574 ~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
+...++-+++++|+-++|++|-|+.++.++
T Consensus 254 ~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 254 EWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred hhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 777788999999999999999999988763
No 145
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.6e-37 Score=286.79 Aligned_cols=243 Identities=22% Similarity=0.353 Sum_probs=196.5
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---------CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---------TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv 408 (627)
.+.+|+|..++|.+...+ +|+..|+|++..... ..+.-.+|+.+++.+..||+|+.+.+.|+.+...++|
T Consensus 22 keilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlV 101 (411)
T KOG0599|consen 22 KEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFVFLV 101 (411)
T ss_pred HHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhh
Confidence 356999999999888754 688999998854321 1234567899999999999999999999999999999
Q ss_pred EecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 409 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
+|.|+.|.|.++|... ..+++....+|+.|+..|++|||..+ ||||||||+|||++++.++||+|||+|..+
T Consensus 102 Fdl~prGELFDyLts~-----VtlSEK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~~i~isDFGFa~~l 173 (411)
T KOG0599|consen 102 FDLMPRGELFDYLTSK-----VTLSEKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNMNIKISDFGFACQL 173 (411)
T ss_pred hhhcccchHHHHhhhh-----eeecHHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeeccccceEEeccceeecc
Confidence 9999999999999864 46899999999999999999999998 999999999999999999999999999988
Q ss_pred CCCC---CCCCCccccCccccCC------CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccc
Q 006884 489 NFPT---TATRTIGYRAPEVTET------RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTA 559 (627)
Q Consensus 489 ~~~~---~~~~t~~y~aPE~~~~------~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 559 (627)
.... ..+|||+|+|||.+.. ..|+..+|+|+.||++|.|+.|.+||.+..+-- .++ .+.++...
T Consensus 174 ~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQml------MLR-~ImeGkyq 246 (411)
T KOG0599|consen 174 EPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQML------MLR-MIMEGKYQ 246 (411)
T ss_pred CCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHH------HHH-HHHhcccc
Confidence 7653 4579999999999854 357888999999999999999999997532100 011 11122111
Q ss_pred cccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 560 EVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 560 ~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
. ..+...+.....-+++.+|++.||.+|.|++|++.+
T Consensus 247 F-------~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 247 F-------RSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred c-------CCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 0 111223344456678889999999999999999984
No 146
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=3.3e-36 Score=311.54 Aligned_cols=233 Identities=22% Similarity=0.317 Sum_probs=184.8
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHH-HHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEV-VGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~-l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
+.||+|+||.||+++.. +|+.||+|++.... .....+..|... +..+ +||||+++++.+...+..++||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNV-KHPFLVGLHYSFQTTEKLYFVLDFVN 79 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhC-CCCCCccEEEEEecCCEEEEEEcCCC
Confidence 36999999999999965 68999999986542 123445566554 4455 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC---
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF--- 490 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~--- 490 (627)
+|+|..++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 80 ~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~ 151 (325)
T cd05604 80 GGELFFHLQRE-----RSFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSD 151 (325)
T ss_pred CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccCCCCCC
Confidence 99999888753 35899999999999999999999998 99999999999999999999999999875321
Q ss_pred -CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 491 -PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 491 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
.....|++.|+|||++.+..++.++|||||||++|||++|+.||..... .+.......... ...
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~------~~~~~~~~~~~~---------~~~ 216 (325)
T cd05604 152 TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDV------AEMYDNILHKPL---------VLR 216 (325)
T ss_pred CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCH------HHHHHHHHcCCc---------cCC
Confidence 2234578999999999999999999999999999999999999975421 111222221110 001
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDD 599 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~e 599 (627)
. .....+.+++.+|++.+|.+||++.+
T Consensus 217 ~---~~~~~~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 217 P---GASLTAWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred C---CCCHHHHHHHHHHhccCHHhcCCCCC
Confidence 1 12234567888999999999998863
No 147
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=2.8e-35 Score=296.59 Aligned_cols=248 Identities=23% Similarity=0.417 Sum_probs=195.7
Q ss_pred hcccCcCCceEEEEEEEcC----CcEEEEEEecccccC---HHHHHHHHHHHHHhccCCceeceeeEEeeCCc------e
Q 006884 339 AEVLGKGSYGSTYKAILED----GTTVVVKRLREVAAT---KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDE------K 405 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~------~ 405 (627)
.+.||+|+||.||+|.... +..||+|+++..... ...+.+|++.+..+ +|+||+++++++..... .
T Consensus 4 ~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~ 82 (273)
T cd05035 4 GKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDF-DHPNVMKLIGVCFEASSLQKIPKP 82 (273)
T ss_pred ccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhC-CCCCeeeEEeeeccCCccccCccc
Confidence 4679999999999998642 367999998754322 35688899999999 99999999998876554 6
Q ss_pred eEEEecCCCCcHHHHhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccc
Q 006884 406 LVVYSYMPAGSLFMLLHRNRSD-GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGL 484 (627)
Q Consensus 406 ~lv~e~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~ 484 (627)
++++||+++|+|..++...+.. ....+++.....++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+
T Consensus 83 ~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~ 159 (273)
T cd05035 83 MVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN---FIHRDLAARNCMLREDMTVCVADFGL 159 (273)
T ss_pred EEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchheEEECCCCeEEECCccc
Confidence 8999999999999998654321 2346899999999999999999999998 99999999999999999999999999
Q ss_pred ccccCCCCC------CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcc
Q 006884 485 AHLINFPTT------ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEW 557 (627)
Q Consensus 485 a~~~~~~~~------~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 557 (627)
++....... ...+..|+|||++.+..++.++||||||+++|||++ |..||.+.... +.........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~------~~~~~~~~~~- 232 (273)
T cd05035 160 SKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH------EIYDYLRHGN- 232 (273)
T ss_pred eeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHHHcCC-
Confidence 987643321 123567999999988889999999999999999999 88998653211 1111111111
Q ss_pred cccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006884 558 TAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607 (627)
Q Consensus 558 ~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~ 607 (627)
.. .........+.+++.+||+.+|++||++.|+++.|+++
T Consensus 233 ~~----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 233 RL----------KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CC----------CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00 01112344678888999999999999999999999876
No 148
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=7.2e-36 Score=308.87 Aligned_cols=238 Identities=24% Similarity=0.334 Sum_probs=189.0
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.+ +++.||+|++.... ...+.+..|.+++..+.+|++|+.+.+++...+..++||||++
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~ 84 (324)
T cd05587 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 84 (324)
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCC
Confidence 467999999999999966 47789999987542 2345677888888888556678889999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC---
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF--- 490 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~--- 490 (627)
+|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 85 ~g~L~~~~~~~-----~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~ 156 (324)
T cd05587 85 GGDLMYHIQQV-----GKFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGK 156 (324)
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcceecCCCCC
Confidence 99999998754 35889999999999999999999998 99999999999999999999999999875321
Q ss_pred -CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 491 -PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 491 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.... . .. .
T Consensus 157 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~------~~~~~i~~~~-~------~~--~ 221 (324)
T cd05587 157 TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED------ELFQSIMEHN-V------SY--P 221 (324)
T ss_pred ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH------HHHHHHHcCC-C------CC--C
Confidence 12345789999999999999999999999999999999999999754311 1111111110 0 00 0
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKM-----DDVVR 602 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~-----~ev~~ 602 (627)
.. ...++.+++.+|+..+|.+|++. +++.+
T Consensus 222 ~~---~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 256 (324)
T cd05587 222 KS---LSKEAVSICKGLLTKHPAKRLGCGPTGERDIRE 256 (324)
T ss_pred CC---CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 11 12356678889999999999986 56654
No 149
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.2e-35 Score=298.53 Aligned_cols=251 Identities=21% Similarity=0.347 Sum_probs=200.8
Q ss_pred hcccCcCCceEEEEEEE-cCCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||++.. .++..+|||.+.... ....++.+|++++..+ +|+||+++++++..++..+++|||++
T Consensus 7 ~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~v~e~~~ 85 (267)
T cd08229 7 EKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFIEDNELNIVLELAD 85 (267)
T ss_pred hhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHc-cCCchhhhhheeEeCCeEEEEEEecC
Confidence 46799999999999995 478999999876432 1235788899999999 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT- 492 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~- 492 (627)
+++|.+++..... ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 86 ~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd08229 86 AGDLSRMIKHFKK-QKRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred CCCHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcchhhhccccCCc
Confidence 9999999875322 2346899999999999999999999998 9999999999999999999999999987664322
Q ss_pred ---CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 493 ---TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 493 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
...++..|+|||.+.+..++.++||||||+++|||++|..||.....+ ............ .+..
T Consensus 162 ~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~~------~~~~--- 228 (267)
T cd08229 162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYSLCKKIEQCD------YPPL--- 228 (267)
T ss_pred ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch----HHHHhhhhhcCC------CCCC---
Confidence 235678899999998888999999999999999999999999643221 111111111000 0000
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhc
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQ 608 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~ 608 (627)
........+.+++.+||+.+|++|||+.+|++.++++.
T Consensus 229 -~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 229 -PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred -CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 01123345777888999999999999999999999875
No 150
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=2.1e-35 Score=294.74 Aligned_cols=244 Identities=26% Similarity=0.439 Sum_probs=199.9
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHH
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 418 (627)
.+.||+|+||.||++... ++.||+|.+.......+++.+|+.++..+ +|+|++++++++...+..++||||+++++|.
T Consensus 11 ~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~ 88 (256)
T cd05039 11 GATIGKGEFGDVMLGDYR-GQKVAVKCLKDDSTAAQAFLAEASVMTTL-RHPNLVQLLGVVLQGNPLYIVTEYMAKGSLV 88 (256)
T ss_pred eeeeecCCCceEEEEEec-CcEEEEEEeccchhHHHHHHHHHHHHHhc-CCcceeeeEEEEcCCCCeEEEEEecCCCcHH
Confidence 478999999999999976 78999999976655567899999999999 8999999999999889999999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCC-CCCC
Q 006884 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTT-ATRT 497 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~-~~~t 497 (627)
+++.... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||.++....... ...+
T Consensus 89 ~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 162 (256)
T cd05039 89 DYLRSRG---RAVITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLP 162 (256)
T ss_pred HHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEcccccccccccccccCCCc
Confidence 9997542 235899999999999999999999998 99999999999999999999999999987643322 2235
Q ss_pred ccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHH
Q 006884 498 IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEM 576 (627)
Q Consensus 498 ~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 576 (627)
..|+|||++.+..++.++||||||+++||+++ |..||...... .+........... ......
T Consensus 163 ~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-------~~~~~~~~~~~~~----------~~~~~~ 225 (256)
T cd05039 163 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-------DVVPHVEKGYRME----------APEGCP 225 (256)
T ss_pred ccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH-------HHHHHHhcCCCCC----------CccCCC
Confidence 67999999988889999999999999999997 99998643211 1111111111100 011123
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006884 577 VQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607 (627)
Q Consensus 577 ~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~ 607 (627)
..+.+++.+||..+|++||++.|++++|+.+
T Consensus 226 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 226 PEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 4677889999999999999999999999764
No 151
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=2.2e-36 Score=313.63 Aligned_cols=242 Identities=20% Similarity=0.313 Sum_probs=192.3
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||++..+ +++.||+|+++.... ..+.+.+|++++..+ +|+||+++++++.+.+..++||||++
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~ 84 (330)
T cd05601 6 KSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSIS-NSPWIPQLQYAFQDKDNLYLVMEYQP 84 (330)
T ss_pred EEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceeeEEecCCeEEEEECCCC
Confidence 468999999999999965 688999999975432 345678888888888 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT- 492 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~- 492 (627)
+|+|.+++.+.. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 85 ~~~L~~~l~~~~----~~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~ 157 (330)
T cd05601 85 GGDLLSLLNRYE----DQFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM 157 (330)
T ss_pred CCCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCeECCCCCc
Confidence 999999997652 35899999999999999999999998 9999999999999999999999999997664322
Q ss_pred ----CCCCCccccCccccC------CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006884 493 ----TATRTIGYRAPEVTE------TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 493 ----~~~~t~~y~aPE~~~------~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
...+|+.|+|||++. ...++.++|||||||++|||++|+.||..... ......+.......
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~------~~~~~~i~~~~~~~--- 228 (330)
T cd05601 158 VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS------AKTYNNIMNFQRFL--- 228 (330)
T ss_pred eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH------HHHHHHHHcCCCcc---
Confidence 235788999999986 45678999999999999999999999975421 11122222111100
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
..+........+.+++..|++ +|.+||++++++++
T Consensus 229 -----~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 229 -----KFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred -----CCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 001111122345677778997 99999999999863
No 152
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=9.7e-36 Score=299.98 Aligned_cols=243 Identities=24% Similarity=0.366 Sum_probs=192.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeC------CceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSK------DEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~------~~~~lv~e~ 411 (627)
.+.||+|+||.||+|... +++.||+|.+........++..|++++.++.+|+|++++.+++... ...+++|||
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~ 90 (272)
T cd06637 11 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEF 90 (272)
T ss_pred HHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEc
Confidence 467999999999999965 5788999998766556678899999999987899999999998753 357899999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 491 (627)
+++|+|.+++...+ ...+++..+..++.|++.|++|||+.+ |+||||||+||++++++.++|+|||++......
T Consensus 91 ~~~~~L~~~l~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~ 164 (272)
T cd06637 91 CGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 164 (272)
T ss_pred CCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEEccCCCceecccc
Confidence 99999999997643 246899999999999999999999998 999999999999999999999999998765322
Q ss_pred ----CCCCCCccccCccccC-----CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006884 492 ----TTATRTIGYRAPEVTE-----TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 492 ----~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
....++..|+|||++. ...++.++|||||||++|||++|+.||...... ... .... .......
T Consensus 165 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~-----~~~-~~~~-~~~~~~~- 236 (272)
T cd06637 165 VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM-----RAL-FLIP-RNPAPRL- 236 (272)
T ss_pred cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH-----HHH-HHHh-cCCCCCC-
Confidence 2345788899999985 345788999999999999999999999643211 111 0001 1000000
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.. ......+.+++.+||..+|.+|||+.|++++
T Consensus 237 -----~~---~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 237 -----KS---KKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred -----CC---CCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 00 1122356788889999999999999999763
No 153
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=2e-35 Score=298.65 Aligned_cols=247 Identities=24% Similarity=0.391 Sum_probs=194.8
Q ss_pred hcccCcCCceEEEEEEEcC------CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILED------GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|.+.+ +..|++|.+..... ....|..|+.+++.+ +|+||+++++++.+.+..++|||
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e 89 (277)
T cd05036 11 LRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKF-NHQNIVRLIGVSFERLPRFILLE 89 (277)
T ss_pred eeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCcEEEEe
Confidence 4679999999999999753 56789998764432 345689999999999 99999999999999999999999
Q ss_pred cCCCCcHHHHhhhcCCC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC---CeEEeecccc
Q 006884 411 YMPAGSLFMLLHRNRSD--GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL---NGCISDVGLA 485 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~---~~ki~DfG~a 485 (627)
|+++++|.+++...+.. ....++|..+++++.|++.||.|||+.+ ++||||||+||+++.++ .+||+|||++
T Consensus 90 ~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~~~kl~dfg~~ 166 (277)
T cd05036 90 LMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGRVAKIADFGMA 166 (277)
T ss_pred cCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCcceEeccCccc
Confidence 99999999999765421 1235899999999999999999999998 99999999999998764 5899999999
Q ss_pred cccCCCC------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006884 486 HLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 486 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
+...... ....+..|+|||++.+..++.++|||||||++|||++ |+.||...... .....+......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~------~~~~~~~~~~~~ 240 (277)
T cd05036 167 RDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ------EVMEFVTGGGRL 240 (277)
T ss_pred cccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH------HHHHHHHcCCcC
Confidence 8763221 1122457999999998899999999999999999997 99999754321 111111111100
Q ss_pred ccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 006884 559 AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQ 606 (627)
Q Consensus 559 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~ 606 (627)
. ........+.+++.+|++.+|++||++.+|+++|++
T Consensus 241 -~----------~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 241 -D----------PPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred -C----------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 0 001123467788899999999999999999998863
No 154
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=2.9e-35 Score=293.87 Aligned_cols=243 Identities=26% Similarity=0.428 Sum_probs=195.1
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEee-CCceeEEEecCCCCcH
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS-KDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~-~~~~~lv~e~~~~gsL 417 (627)
.+.||+|+||.||++..+ +..||+|.++.. ...+.+.+|+.+++++ +|+|++++++++.. ++..++++||+++|+|
T Consensus 11 ~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~-~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L 87 (256)
T cd05082 11 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKND-ATAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 87 (256)
T ss_pred eeeecccCCCeEEEEEEc-CCcEEEEEeCCC-chHHHHHHHHHHHHhC-CCCCeeeEEEEEEcCCCceEEEEECCCCCcH
Confidence 478999999999999876 788999988643 3456788999999999 99999999997654 4568999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC-CCCCC
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-TTATR 496 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-~~~~~ 496 (627)
.++++... ...+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++..... .....
T Consensus 88 ~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 161 (256)
T cd05082 88 VDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL 161 (256)
T ss_pred HHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCccceeccccCCCCcc
Confidence 99997543 235889999999999999999999998 999999999999999999999999998765432 22334
Q ss_pred CccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHH
Q 006884 497 TIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEE 575 (627)
Q Consensus 497 t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 575 (627)
+..|+|||+..+..++.++||||||+++|||++ |+.||.... .......+ ........ ....
T Consensus 162 ~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~------~~~~~~~~-~~~~~~~~----------~~~~ 224 (256)
T cd05082 162 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP------LKDVVPRV-EKGYKMDA----------PDGC 224 (256)
T ss_pred ceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHH-hcCCCCCC----------CCCC
Confidence 668999999988889999999999999999998 999986432 12222111 11111110 1122
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006884 576 MVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607 (627)
Q Consensus 576 ~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~ 607 (627)
...+.+++.+|++.+|++|||+.++++.|+++
T Consensus 225 ~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 225 PPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 34667888899999999999999999999864
No 155
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=8.4e-36 Score=310.74 Aligned_cols=254 Identities=26% Similarity=0.375 Sum_probs=196.4
Q ss_pred HhcccCcCCceEEEEEEE------cCCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeC-CceeEE
Q 006884 338 SAEVLGKGSYGSTYKAIL------EDGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSK-DEKLVV 408 (627)
Q Consensus 338 ~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~-~~~~lv 408 (627)
..+.||+|+||.||+|.. .+++.||||+++.... ....+.+|++++.++.+|+||+++++++... ...+++
T Consensus 11 ~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv 90 (343)
T cd05103 11 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 90 (343)
T ss_pred ccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEE
Confidence 357899999999999973 2467899999875432 2356888999999998899999999988654 457899
Q ss_pred EecCCCCcHHHHhhhcCCC-------------------------------------------------------------
Q 006884 409 YSYMPAGSLFMLLHRNRSD------------------------------------------------------------- 427 (627)
Q Consensus 409 ~e~~~~gsL~~~l~~~~~~------------------------------------------------------------- 427 (627)
+||+++|+|.++++.....
T Consensus 91 ~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (343)
T cd05103 91 VEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQED 170 (343)
T ss_pred EeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhh
Confidence 9999999999998753210
Q ss_pred -CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC------CCCCCccc
Q 006884 428 -GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT------TATRTIGY 500 (627)
Q Consensus 428 -~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~------~~~~t~~y 500 (627)
....+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++...... ...++..|
T Consensus 171 ~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y 247 (343)
T cd05103 171 LYKKVLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 247 (343)
T ss_pred hhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcce
Confidence 0124788899999999999999999998 9999999999999999999999999987653221 12245679
Q ss_pred cCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHH
Q 006884 501 RAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQM 579 (627)
Q Consensus 501 ~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l 579 (627)
+|||.+.+..++.++||||||+++|||++ |..||...... ............... .. ....++
T Consensus 248 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~------~~~~~~~~~~~~~~~-------~~---~~~~~~ 311 (343)
T cd05103 248 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID------EEFCRRLKEGTRMRA-------PD---YTTPEM 311 (343)
T ss_pred ECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc------HHHHHHHhccCCCCC-------CC---CCCHHH
Confidence 99999988899999999999999999997 99998753211 111111111111000 00 112357
Q ss_pred HHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 580 LQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 580 ~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
.+++.+||+.+|++||++.|++++|+.+.+.
T Consensus 312 ~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 312 YQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 7888999999999999999999999998653
No 156
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=2.4e-35 Score=295.21 Aligned_cols=244 Identities=27% Similarity=0.457 Sum_probs=200.6
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHH
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 418 (627)
.+.||+|+||.||++..++++.||||.+.......+++.+|+++++.+ +|+|++++++++......++||||+++++|.
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~ 89 (261)
T cd05034 11 ERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKL-RHDKLVQLYAVCSEEEPIYIVTEYMSKGSLL 89 (261)
T ss_pred eeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhC-CCCCEeeeeeeeecCCceEEEEeccCCCCHH
Confidence 467999999999999988888999999987666678899999999999 8999999999999888999999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-----C
Q 006884 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-----T 493 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~-----~ 493 (627)
+++.... +..+++..+..++.+++.|+.|||+.+ ++|+||||+||+++.++.+||+|||.++...... .
T Consensus 90 ~~i~~~~---~~~~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 163 (261)
T cd05034 90 DFLKSGE---GKKLRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREG 163 (261)
T ss_pred HHHhccc---cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECccccceeccchhhhhhhc
Confidence 9997642 346899999999999999999999998 9999999999999999999999999987764321 1
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
...+..|+|||.+.+..++.++||||||+++||+++ |+.||...... ............ ...
T Consensus 164 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~------~~~~~~~~~~~~--------~~~--- 226 (261)
T cd05034 164 AKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR------EVLEQVERGYRM--------PRP--- 226 (261)
T ss_pred cCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHHHcCCCC--------CCC---
Confidence 223467999999998889999999999999999998 99999653211 111111111000 000
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQ 606 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~ 606 (627)
......+.+++.+|++.+|++||+++++.+.|+.
T Consensus 227 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 227 PNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 1113457788899999999999999999999875
No 157
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=8.3e-36 Score=297.67 Aligned_cols=241 Identities=21% Similarity=0.425 Sum_probs=197.4
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHH
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 418 (627)
.+.||+|+||.||++.+.++..+|+|.+........++.+|++++..+ +|||++++++++......++|+||+++++|.
T Consensus 9 ~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~ 87 (256)
T cd05112 9 VQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKL-SHPKLVQLYGVCTERSPICLVFEFMEHGCLS 87 (256)
T ss_pred EeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhC-CCCCeeeEEEEEccCCceEEEEEcCCCCcHH
Confidence 477999999999999987788999999876666677899999999999 9999999999999999999999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-----C
Q 006884 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-----T 493 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~-----~ 493 (627)
+++.... ..+++..+..++.+++.|+.|||+.+ ++||||||+||+++.++.+||+|||.++...... .
T Consensus 88 ~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05112 88 DYLRAQR----GKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTG 160 (256)
T ss_pred HHHHhCc----cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeecccCcccccCC
Confidence 9987542 35789999999999999999999998 9999999999999999999999999987653221 1
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
..++.+|+|||++.+..++.++||||||+++|||++ |+.||..... ....... .... ....+.
T Consensus 161 ~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~------~~~~~~~-~~~~--~~~~~~------- 224 (256)
T cd05112 161 TKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN------SEVVETI-NAGF--RLYKPR------- 224 (256)
T ss_pred CccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH------HHHHHHH-hCCC--CCCCCC-------
Confidence 224568999999998899999999999999999998 9999975321 1111111 1110 001111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMI 604 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L 604 (627)
.....+.+++.+||+.+|++||++.|++++|
T Consensus 225 -~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 225 -LASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred -CCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 1124678899999999999999999999887
No 158
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=6.9e-36 Score=298.42 Aligned_cols=242 Identities=24% Similarity=0.392 Sum_probs=194.9
Q ss_pred cccCcCCceEEEEEEEcC--C--cEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 340 EVLGKGSYGSTYKAILED--G--TTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
+.||+|++|.||+|.+.+ + ..||+|.+..... ..+.+..|++.+.++ +|+||+++++.+.. ...++|+||++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~-~~~~~v~e~~~ 78 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSL-DHENLIRLYGVVLT-HPLMMVTELAP 78 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhc-CCCCccceeEEEcC-CeEEEEEEecC
Confidence 468999999999999653 2 3689999876543 356789999999999 99999999999988 88899999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT- 492 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~- 492 (627)
+|+|.+++..... ..++|.....++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 79 ~~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 152 (257)
T cd05040 79 LGSLLDRLRKDAL---GHFLISTLCDYAVQIANGMRYLESKR---FIHRDLAARNILLASDDKVKIGDFGLMRALPQNED 152 (257)
T ss_pred CCcHHHHHHhccc---ccCcHHHHHHHHHHHHHHHHHHHhCC---ccccccCcccEEEecCCEEEecccccccccccccc
Confidence 9999999986531 46899999999999999999999998 9999999999999999999999999998764321
Q ss_pred ------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchh
Q 006884 493 ------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVE 565 (627)
Q Consensus 493 ------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 565 (627)
...++..|+|||++.+..++.++||||||+++|||++ |+.||...... +............
T Consensus 153 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~------~~~~~~~~~~~~~------ 220 (257)
T cd05040 153 HYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS------QILKKIDKEGERL------ 220 (257)
T ss_pred ceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHHHhcCCcC------
Confidence 2235678999999998899999999999999999998 99999643221 1111111111000
Q ss_pred hhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 006884 566 LLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605 (627)
Q Consensus 566 l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~ 605 (627)
.........+.+++.+|++.+|++||++.|+++.|.
T Consensus 221 ----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 221 ----ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred ----CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 011122346778899999999999999999999875
No 159
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2.5e-36 Score=301.90 Aligned_cols=239 Identities=24% Similarity=0.425 Sum_probs=187.8
Q ss_pred cccCcCCceEEEEEEEcC--------CcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 340 EVLGKGSYGSTYKAILED--------GTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
+.||+|+||.||+|..+. ...|++|.+.... ...+.+..|+.++..+ .|||++++++++..++..++|||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~~~~~~~~~~~~~lv~e 79 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQL-SHKHLVLNYGVCVCGDESIMVQE 79 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhC-CCCChhheeeEEEeCCCcEEEEe
Confidence 469999999999998642 2347888775432 2345688889999988 89999999999999899999999
Q ss_pred cCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC--------eEEeec
Q 006884 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN--------GCISDV 482 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~--------~ki~Df 482 (627)
|+++|+|.++++... ..+++..++.++.|++.||.|||+.+ |+||||||+||+++.++. ++++||
T Consensus 80 ~~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~ 152 (258)
T cd05078 80 YVKFGSLDTYLKKNK----NLINISWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDP 152 (258)
T ss_pred cCCCCcHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccCCCceEEeccc
Confidence 999999999997642 35899999999999999999999998 999999999999987765 599999
Q ss_pred ccccccCCCCCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCC-CCCCCCCCCCCCCHHHHHHHHhhhccccc
Q 006884 483 GLAHLINFPTTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGK-APLQHSGHDDVVDLPRWVRSVVREEWTAE 560 (627)
Q Consensus 483 G~a~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (627)
|.+..........++..|+|||++.+ ..++.++||||||+++|||++|. .||...... ... ...... ..
T Consensus 153 g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~------~~~-~~~~~~--~~ 223 (258)
T cd05078 153 GISITVLPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ------KKL-QFYEDR--HQ 223 (258)
T ss_pred ccccccCCchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH------HHH-HHHHcc--cc
Confidence 99877665555667889999999976 45799999999999999999985 555432111 000 001100 00
Q ss_pred ccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 006884 561 VFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605 (627)
Q Consensus 561 ~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~ 605 (627)
+ + .....++.+++.+||+.+|++|||++++++.|+
T Consensus 224 -----~---~--~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 224 -----L---P--APKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred -----C---C--CCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0 0 011235778899999999999999999998863
No 160
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=3e-35 Score=295.38 Aligned_cols=251 Identities=21% Similarity=0.361 Sum_probs=202.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|... +++.||+|.++... ...+.+.+|+++++++ +|+|++++++++...+..++||||++
T Consensus 7 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~ 85 (267)
T cd08224 7 EKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQL-DHPNVIKYLASFIENNELNIVLELAD 85 (267)
T ss_pred eeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCeeeeeeeeecCCeEEEEEecCC
Confidence 367999999999999976 78999999886421 2256788999999999 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT- 492 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~- 492 (627)
+|+|.+++..... ....+++..+..++.+++.||.|||+.+ ++||||+|+||+++.++.++|+|||+++......
T Consensus 86 ~~~L~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~ 161 (267)
T cd08224 86 AGDLSRMIKHFKK-QKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred CCCHHHHHHHhcc-cCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEeccceeeeccCCCc
Confidence 9999999875422 2346899999999999999999999998 9999999999999999999999999987654322
Q ss_pred ---CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 493 ---TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 493 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
...++..|+|||.+.+..++.++||||||+++|+|++|+.||.... .+..+........ .....
T Consensus 162 ~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~~~~-~~~~~-------- 228 (267)
T cd08224 162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK----MNLYSLCKKIEKC-DYPPL-------- 228 (267)
T ss_pred ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC----ccHHHHHhhhhcC-CCCCC--------
Confidence 2346788999999988889999999999999999999999986432 1222222111111 00000
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhc
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQ 608 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~ 608 (627)
........+.+++.+||..+|++||++.+|+++|++++
T Consensus 229 -~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 229 -PADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred -ChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 01123346778889999999999999999999999885
No 161
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=9.7e-36 Score=301.25 Aligned_cols=247 Identities=23% Similarity=0.412 Sum_probs=195.2
Q ss_pred hcccCcCCceEEEEEEEc-CCc----EEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILE-DGT----TVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||+||+|.+. ++. .||+|.++.... ..+++..|+.++..+ .|+||+++++++.. ...++++||
T Consensus 12 ~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~-~~~~l~~~~ 89 (279)
T cd05109 12 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGV-GSPYVCRLLGICLT-STVQLVTQL 89 (279)
T ss_pred eeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhc-CCCCCceEEEEEcC-CCcEEEEEc
Confidence 478999999999999854 444 489998865422 346788899999888 99999999999875 456799999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 491 (627)
+++|+|.+++.... ..+++..++.++.|++.||.|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 90 ~~~g~l~~~l~~~~----~~~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~ 162 (279)
T cd05109 90 MPYGCLLDYVRENK----DRIGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDID 162 (279)
T ss_pred CCCCCHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCCCceeecccc
Confidence 99999999997542 35899999999999999999999998 999999999999999999999999999876432
Q ss_pred CC------CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006884 492 TT------ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 492 ~~------~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
.. ..++..|+|||...+..++.++||||||+++|||++ |..||+..... .+..+ +.......
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~~----~~~~~~~~---- 231 (279)
T cd05109 163 ETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR---EIPDL----LEKGERLP---- 231 (279)
T ss_pred cceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHH----HHCCCcCC----
Confidence 21 123567999999998899999999999999999998 89998643211 11111 11111000
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
........+.+++.+||..+|++||++.++++.|+++....
T Consensus 232 ------~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 232 ------QPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred ------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 01122346778899999999999999999999999886554
No 162
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=4.6e-36 Score=310.50 Aligned_cols=235 Identities=22% Similarity=0.288 Sum_probs=184.3
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHH-HHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEV-VGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~-l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
+.||+|+||.||+++.+ +++.||+|++.... .....+..|... +..+ +|+||+++++++...+..++||||++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~h~~Iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV-KHPFLVGLHFSFQTADKLYFVLDYIN 79 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhC-CCCCCCceeEEEEcCCeEEEEEeCCC
Confidence 36999999999999976 57889999986532 122344455443 4556 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC---
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF--- 490 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~--- 490 (627)
+|+|.+++... ..++......++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 80 ~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~ 151 (325)
T cd05602 80 GGELFYHLQRE-----RCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG 151 (325)
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCcccccCCC
Confidence 99999999753 34778888899999999999999998 99999999999999999999999999875422
Q ss_pred -CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 491 -PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 491 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+..... ...
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~~i~~~~~---------~~~ 216 (325)
T cd05602 152 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT------AEMYDNILNKPL---------QLK 216 (325)
T ss_pred CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH------HHHHHHHHhCCc---------CCC
Confidence 1234588999999999999999999999999999999999999975432 111222211110 001
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVV 601 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~ 601 (627)
. .....+.+++.+|++.+|.+||++.+.+
T Consensus 217 ~---~~~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 217 P---NITNSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred C---CCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence 1 1223456788899999999999987543
No 163
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.6e-35 Score=302.22 Aligned_cols=254 Identities=21% Similarity=0.359 Sum_probs=196.5
Q ss_pred hcccCcCCceEEEEEEEcC-----------------CcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEE
Q 006884 339 AEVLGKGSYGSTYKAILED-----------------GTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYY 399 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~ 399 (627)
.+.||+|+||.||++...+ +..||+|.+.... ...+++.+|++++..+ +|||++++++++
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~ 88 (296)
T cd05051 10 VEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRL-SDPNIARLLGVC 88 (296)
T ss_pred cccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhc-CCCCEeEEEEEE
Confidence 4789999999999988542 2458999887543 2356788999999999 999999999999
Q ss_pred eeCCceeEEEecCCCCcHHHHhhhcCCC------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC
Q 006884 400 YSKDEKLVVYSYMPAGSLFMLLHRNRSD------GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ 473 (627)
Q Consensus 400 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~ 473 (627)
..++..++++||+++++|.+++...... ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.
T Consensus 89 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~---i~H~dlkp~Nili~~ 165 (296)
T cd05051 89 TVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN---FVHRDLATRNCLVGK 165 (296)
T ss_pred ecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhceeecC
Confidence 9999999999999999999999865421 1236899999999999999999999998 999999999999999
Q ss_pred CCCeEEeecccccccCCC------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh--CCCCCCCCCCCCCCCH
Q 006884 474 DLNGCISDVGLAHLINFP------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT--GKAPLQHSGHDDVVDL 545 (627)
Q Consensus 474 ~~~~ki~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t--g~~pf~~~~~~~~~~~ 545 (627)
++.++|+|||+++..... ....++..|+|||++.+..++.++||||||+++|||++ +..||...... ..
T Consensus 166 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~---~~ 242 (296)
T cd05051 166 NYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ---QV 242 (296)
T ss_pred CCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH---HH
Confidence 999999999998765322 12234678999999988889999999999999999998 67787643211 11
Q ss_pred HHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 006884 546 PRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQ 606 (627)
Q Consensus 546 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~ 606 (627)
................. ........++.+++.+|++.+|++|||+.||++.|++
T Consensus 243 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 243 IENAGHFFRDDGRQIYL-------PRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred HHHHHhccccccccccC-------CCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 11111111110000000 0111223467889999999999999999999998863
No 164
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=6.6e-36 Score=314.47 Aligned_cols=241 Identities=20% Similarity=0.307 Sum_probs=190.3
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+++.. +++.||||++.... .....+.+|++++..+ +||||+++++++.+++..++||||++
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~lv~E~~~ 84 (364)
T cd05599 6 IKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEA-DNPWVVKLYYSFQDENYLYLIMEYLP 84 (364)
T ss_pred EEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceEEEEEcCCeEEEEECCCC
Confidence 478999999999999975 68899999997542 2234577899999999 89999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 85 ~g~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 156 (364)
T cd05599 85 GGDMMTLLMKK-----DTFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHR 156 (364)
T ss_pred CcHHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccceecccccc
Confidence 99999999753 35899999999999999999999998 999999999999999999999999998654211
Q ss_pred ----------------------------------------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCC
Q 006884 492 ----------------------------------------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGK 531 (627)
Q Consensus 492 ----------------------------------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~ 531 (627)
....||+.|+|||++....++.++|||||||++|||++|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~ 236 (364)
T cd05599 157 TEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGY 236 (364)
T ss_pred ccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCC
Confidence 0134789999999999889999999999999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCC---HHHHHHH
Q 006884 532 APLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPK---MDDVVRM 603 (627)
Q Consensus 532 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs---~~ev~~~ 603 (627)
.||..... ......+..... .. ......... ..+.+++.+|+. +|.+|++ ++|++++
T Consensus 237 ~Pf~~~~~------~~~~~~i~~~~~--~~---~~~~~~~~s---~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 237 PPFCSDNP------QETYRKIINWKE--TL---QFPDEVPLS---PEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCCCCCCH------HHHHHHHHcCCC--cc---CCCCCCCCC---HHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 99975431 111111111100 00 000111112 244566778886 9999998 8888773
No 165
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.9e-35 Score=299.23 Aligned_cols=250 Identities=24% Similarity=0.428 Sum_probs=198.9
Q ss_pred hcccCcCCceEEEEEEEcC-----CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEee-CCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILED-----GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYS-KDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~-~~~~~lv~e 410 (627)
.+.||+|+||.||+|...+ +..|++|++..... ..+.+.+|+.++.++ +|+|++++++++.. +...++++|
T Consensus 11 ~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~~ 89 (280)
T cd05043 11 SDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGL-SHQNILPILHVCIEDGEPPFVLYP 89 (280)
T ss_pred eeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCCCCEEEEE
Confidence 4679999999999999765 68899998865422 346688899999999 99999999998876 467889999
Q ss_pred cCCCCcHHHHhhhcCCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccc
Q 006884 411 YMPAGSLFMLLHRNRSD---GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHL 487 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~ 487 (627)
|+++|+|.+++...+.. .+..+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+++.
T Consensus 90 ~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kl~d~g~~~~ 166 (280)
T cd05043 90 YMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEELQVKITDNALSRD 166 (280)
T ss_pred cCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCCCcEEECCCCCccc
Confidence 99999999999765321 1256899999999999999999999988 99999999999999999999999999986
Q ss_pred cCCCC------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccccc
Q 006884 488 INFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAE 560 (627)
Q Consensus 488 ~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (627)
..... ...++..|+|||++.+..++.++||||||+++||+++ |+.||...... .+..+ .......
T Consensus 167 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~~~~----~~~~~~~- 238 (280)
T cd05043 167 LFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF---EMAAY----LKDGYRL- 238 (280)
T ss_pred ccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH---HHHHH----HHcCCCC-
Confidence 53221 2234667999999988889999999999999999999 99999753211 11111 1111100
Q ss_pred ccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006884 561 VFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 561 ~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 609 (627)
.........+.+++.+||..+|++|||+.++++.|+.+..
T Consensus 239 ---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 239 ---------AQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred ---------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 0011122356788899999999999999999999999865
No 166
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2.1e-35 Score=298.81 Aligned_cols=242 Identities=20% Similarity=0.327 Sum_probs=191.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|... +++.||+|.+.... ...+++.+|++++.++ +||||+++++++...+..++|+||++++
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 84 (279)
T cd06619 6 QEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKC-DSPYIIGFYGAFFVENRISICTEFMDGG 84 (279)
T ss_pred eeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhC-CCCCeeeEEEEEEECCEEEEEEecCCCC
Confidence 467999999999999854 68899999886542 2245688999999999 9999999999999999999999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--CC
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--TT 493 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--~~ 493 (627)
+|..+. .+++.....++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++...... ..
T Consensus 85 ~l~~~~---------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~ 152 (279)
T cd06619 85 SLDVYR---------KIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKT 152 (279)
T ss_pred ChHHhh---------cCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcceecccccccC
Confidence 996542 3678888999999999999999998 999999999999999999999999999765432 33
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCC-CHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV-DLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
..++..|+|||++.+..++.++||||||+++|+|++|+.||......... ............. .. .+. .
T Consensus 153 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~-~--- 222 (279)
T cd06619 153 YVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED-PP-----VLP-V--- 222 (279)
T ss_pred CCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC-CC-----CCC-C---
Confidence 45788999999999889999999999999999999999999754322211 1111111111110 00 000 0
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.....++.+++.+|++.+|++||+++|++++
T Consensus 223 ~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 223 GQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred CcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 1122356788889999999999999999875
No 167
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.5e-35 Score=304.32 Aligned_cols=254 Identities=26% Similarity=0.384 Sum_probs=200.6
Q ss_pred HhcccCcCCceEEEEEEEcC--------CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeE
Q 006884 338 SAEVLGKGSYGSTYKAILED--------GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLV 407 (627)
Q Consensus 338 ~~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~l 407 (627)
..+.||+|+||.||+++... +..||+|.++.... ..+++.+|++++.++.+|+||+++++++...+..++
T Consensus 16 i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 95 (334)
T cd05100 16 LGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 95 (334)
T ss_pred ecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEE
Confidence 35789999999999997421 23689998875322 346788999999999789999999999999999999
Q ss_pred EEecCCCCcHHHHhhhcCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC
Q 006884 408 VYSYMPAGSLFMLLHRNRS-----------DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN 476 (627)
Q Consensus 408 v~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~ 476 (627)
++||+++|+|.+++..... .....++|..++.++.|++.||.|||+.+ ++||||||+||+++.++.
T Consensus 96 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nill~~~~~ 172 (334)
T cd05100 96 LVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK---CIHRDLAARNVLVTEDNV 172 (334)
T ss_pred EEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCc
Confidence 9999999999999976431 11345889999999999999999999998 999999999999999999
Q ss_pred eEEeecccccccCCCC------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHH
Q 006884 477 GCISDVGLAHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWV 549 (627)
Q Consensus 477 ~ki~DfG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~ 549 (627)
+||+|||+++...... ...++..|+|||++.+..++.++||||||+++|||++ |..||.... .....
T Consensus 173 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~------~~~~~ 246 (334)
T cd05100 173 MKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP------VEELF 246 (334)
T ss_pred EEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC------HHHHH
Confidence 9999999997654321 1123457999999999899999999999999999998 888886532 22222
Q ss_pred HHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 550 RSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 550 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
..+.... ... ........+.+++.+||+.+|++||++.|+++.|+++....
T Consensus 247 ~~~~~~~-~~~----------~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 247 KLLKEGH-RMD----------KPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred HHHHcCC-CCC----------CCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 2221111 100 01122346778899999999999999999999999987443
No 168
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=5.2e-36 Score=315.16 Aligned_cols=241 Identities=20% Similarity=0.292 Sum_probs=191.2
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+++.+ +++.||+|++.... ...+.+..|++++..+ +||||+++++++.+....++||||++
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~-~h~~iv~~~~~~~~~~~~~lv~Ey~~ 126 (370)
T cd05596 48 IKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHA-NSEWIVQLHYAFQDDKYLYMVMEYMP 126 (370)
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCEEEEEEcCCC
Confidence 478999999999999965 68899999986432 2334577899999999 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|.+++... .++...+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 127 gg~L~~~l~~~------~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~ 197 (370)
T cd05596 127 GGDLVNLMSNY------DIPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGM 197 (370)
T ss_pred CCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEeccceeeccCCCc
Confidence 99999998643 3778888899999999999999998 999999999999999999999999999765432
Q ss_pred ---CCCCCCccccCccccCCC----CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006884 492 ---TTATRTIGYRAPEVTETR----KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 492 ---~~~~~t~~y~aPE~~~~~----~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
....||+.|+|||++.+. .++.++|||||||++|||++|+.||..... ......+.......
T Consensus 198 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~------~~~~~~i~~~~~~~----- 266 (370)
T cd05596 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL------VGTYSKIMDHKNSL----- 266 (370)
T ss_pred ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH------HHHHHHHHcCCCcC-----
Confidence 234589999999998653 478999999999999999999999975431 11122222111000
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 006884 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDS--RPKMDDVVRM 603 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~--RPs~~ev~~~ 603 (627)
..+.......++.+++.+|++.+|.+ ||+++|++++
T Consensus 267 ---~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 267 ---TFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred ---CCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 00111112345667888999999987 9999999775
No 169
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=4e-35 Score=302.54 Aligned_cols=194 Identities=23% Similarity=0.425 Sum_probs=159.4
Q ss_pred hcccCcCCceEEEEEEEc---CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEee--CCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE---DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS--KDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~--~~~~~lv~e~~~ 413 (627)
...||+|+||.||+|+.+ +++.||+|.+.... ....+.+|++++.++ +||||+++++++.. +...++++||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-ISMSACREIALLREL-KHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-CcHHHHHHHHHHHhc-CCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 357999999999999865 46789999986532 345578899999999 99999999998864 345789999985
Q ss_pred CCcHHHHhhhcCC----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe----cCCCCeEEeecccc
Q 006884 414 AGSLFMLLHRNRS----DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL----TQDLNGCISDVGLA 485 (627)
Q Consensus 414 ~gsL~~~l~~~~~----~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl----~~~~~~ki~DfG~a 485 (627)
++|.+++..... .....+++..+..++.|++.||.|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 588888764321 11235889999999999999999999998 9999999999999 45678999999999
Q ss_pred cccCCC-------CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 006884 486 HLINFP-------TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSG 538 (627)
Q Consensus 486 ~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~ 538 (627)
+..... ....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||....
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~ 220 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence 865432 22356889999999876 458999999999999999999999997543
No 170
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.4e-35 Score=322.07 Aligned_cols=243 Identities=23% Similarity=0.307 Sum_probs=192.5
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCC--------cee
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD--------EKL 406 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~--------~~~ 406 (627)
.+.||+|+||.||+++.. +++.||||++..... ....+.+|+..+..+ +|+|++++...+...+ ..+
T Consensus 37 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~-~h~~iv~~~~~~~~~~~~~~~~~~~i~ 115 (496)
T PTZ00283 37 SRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNC-DFFSIVKCHEDFAKKDPRNPENVLMIA 115 (496)
T ss_pred EEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcC-CCCcEEEeecceecccccCcccceEEE
Confidence 468999999999999854 689999999865432 235677888888888 9999999887765432 257
Q ss_pred EEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccc
Q 006884 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH 486 (627)
Q Consensus 407 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 486 (627)
+||||+++|+|.+++..... ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 116 lV~Ey~~~gsL~~~l~~~~~-~~~~l~e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~~~vkL~DFGls~ 191 (496)
T PTZ00283 116 LVLDYANAGDLRQEIKSRAK-TNRTFREHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSNGLVKLGDFGFSK 191 (496)
T ss_pred EEEeCCCCCcHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCCCCEEEEecccCe
Confidence 99999999999999975432 2356899999999999999999999998 9999999999999999999999999997
Q ss_pred ccCC------CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccc
Q 006884 487 LINF------PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAE 560 (627)
Q Consensus 487 ~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (627)
.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.... ....+......... .
T Consensus 192 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~------~~~~~~~~~~~~~~-~ 264 (496)
T PTZ00283 192 MYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN------MEEVMHKTLAGRYD-P 264 (496)
T ss_pred eccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHhcCCCC-C
Confidence 6532 123458899999999999999999999999999999999999997532 22222222211110 0
Q ss_pred ccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 561 VFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 561 ~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
+ ......++.+++.+||+.+|.+||++.+++++
T Consensus 265 -~---------~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 265 -L---------PPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred -C---------CCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 0 01122356778889999999999999999874
No 171
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.4e-35 Score=303.61 Aligned_cols=247 Identities=26% Similarity=0.405 Sum_probs=197.1
Q ss_pred hcccCcCCceEEEEEEEc------CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILE------DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||++... .+..||+|.++.... ..+.+.+|+++++++.+|+||+++++++...+..++++|
T Consensus 40 ~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 119 (302)
T cd05055 40 GKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITE 119 (302)
T ss_pred cceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEEE
Confidence 578999999999999742 345799998875432 235688999999999789999999999999999999999
Q ss_pred cCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC
Q 006884 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF 490 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 490 (627)
|+++|+|.++++... ...+++.....++.|++.||.|||+.+ |+|+||||+||+++.++.++++|||+++....
T Consensus 120 ~~~~~~L~~~i~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~ 193 (302)
T cd05055 120 YCCYGDLLNFLRRKR---ESFLTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGLARDIMN 193 (302)
T ss_pred cCCCCcHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEcCCCeEEECCCcccccccC
Confidence 999999999997543 234899999999999999999999998 99999999999999999999999999976533
Q ss_pred CC------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006884 491 PT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 491 ~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
.. ...++..|+|||++.+..++.++|||||||++|||++ |+.||......+ .............
T Consensus 194 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~------~~~~~~~~~~~~~--- 264 (302)
T cd05055 194 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS------KFYKLIKEGYRMA--- 264 (302)
T ss_pred CCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH------HHHHHHHcCCcCC---
Confidence 21 1234567999999988889999999999999999998 999987543211 1111111111000
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006884 564 VELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~ 607 (627)
... .....+.+++.+|+..+|++||++.|+++.|+++
T Consensus 265 ----~~~---~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 265 ----QPE---HAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred ----CCC---CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 001 1123577888999999999999999999999875
No 172
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=4.4e-35 Score=297.90 Aligned_cols=255 Identities=23% Similarity=0.380 Sum_probs=198.8
Q ss_pred hcccCcCCceEEEEEEEc------CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILE------DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|..+ .+..||+|.+..... ....+.+|+.++..+ +|+||+++++++...+..++|||
T Consensus 11 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e 89 (288)
T cd05061 11 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF-TCHHVVRLLGVVSKGQPTLVVME 89 (288)
T ss_pred eeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCCcEEEEe
Confidence 478999999999999754 245799998764432 234678899999999 89999999999999999999999
Q ss_pred cCCCCcHHHHhhhcCCC-----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccc
Q 006884 411 YMPAGSLFMLLHRNRSD-----GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA 485 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a 485 (627)
|+++|+|.+++...... .....++..+.+++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++
T Consensus 90 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~~~~~~L~Dfg~~ 166 (288)
T cd05061 90 LMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMT 166 (288)
T ss_pred CCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEcCCCcEEECcCCcc
Confidence 99999999999754211 1234577888999999999999999998 999999999999999999999999998
Q ss_pred cccCCCC------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006884 486 HLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 486 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
+...... ...++..|+|||.+.+..++.++||||||+++|||++ |..||...... +...........
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~------~~~~~~~~~~~~ 240 (288)
T cd05061 167 RDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE------QVLKFVMDGGYL 240 (288)
T ss_pred ccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHHHcCCCC
Confidence 7653221 1223567999999998899999999999999999998 78888653221 111111111100
Q ss_pred ccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccccc
Q 006884 559 AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRN 614 (627)
Q Consensus 559 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~~~ 614 (627)
. ........+.+++.+|++.+|++|||+.++++.|++......++
T Consensus 241 -~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~ 285 (288)
T cd05061 241 -D----------QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPE 285 (288)
T ss_pred -C----------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCC
Confidence 0 00112346788899999999999999999999999876654443
No 173
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=2e-35 Score=299.85 Aligned_cols=244 Identities=23% Similarity=0.314 Sum_probs=193.3
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||++... +++.||+|.+..... ..+.+..|+.++.++ +|++++.+.+.+...+..++||||++
T Consensus 5 ~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~ 83 (285)
T cd05630 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVLTLMN 83 (285)
T ss_pred eEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhC-CCCCeeeeeEEEecCCEEEEEEEecC
Confidence 367999999999999965 688999998865422 234567899999999 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT- 492 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~- 492 (627)
+|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++.......
T Consensus 84 g~~L~~~l~~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05630 84 GGDLKFHIYHMG---EAGFEEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 157 (285)
T ss_pred CCcHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc
Confidence 999999986542 235899999999999999999999988 9999999999999999999999999987654322
Q ss_pred --CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 493 --TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 493 --~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
...++..|+|||++.+..++.++||||||+++|||++|+.||........ .......... ... ..
T Consensus 158 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~---~~~~~~~~~~-~~~-----~~---- 224 (285)
T cd05630 158 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK---REEVERLVKE-VQE-----EY---- 224 (285)
T ss_pred ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch---HHHHHhhhhh-hhh-----hc----
Confidence 24578899999999998999999999999999999999999975432110 0001111100 000 00
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRPK-----MDDVVRM 603 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RPs-----~~ev~~~ 603 (627)
.......+.+++.+||+.+|++||| ++|++++
T Consensus 225 -~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 225 -SEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred -CccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 0112234667888999999999999 8888873
No 174
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=9.1e-36 Score=307.75 Aligned_cols=232 Identities=23% Similarity=0.325 Sum_probs=183.4
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHH-HHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQME-VVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~-~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
+.||+|+||.||+|+.. +++.||+|++.... .....+..|.. ++..+ +||||+++++++.+.+..++||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNL-KHPFLVGLHYSFQTAEKLYFVLDYVN 79 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhC-CCCCccceeeEEEcCCEEEEEEcCCC
Confidence 36999999999999975 58899999986532 12334555554 45566 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|..++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 80 ~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 151 (321)
T cd05603 80 GGELFFHLQRE-----RCFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEE 151 (321)
T ss_pred CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccCCCCCC
Confidence 99999888653 35788889999999999999999998 999999999999999999999999998753221
Q ss_pred --CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 492 --TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||...+ .......+..... ...
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~i~~~~~---------~~~ 216 (321)
T cd05603 152 TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD------VSQMYDNILHKPL---------QLP 216 (321)
T ss_pred ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC------HHHHHHHHhcCCC---------CCC
Confidence 23457899999999998899999999999999999999999997542 1222222221110 000
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMD 598 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ 598 (627)
......+.+++.+|++.+|.+||++.
T Consensus 217 ---~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 217 ---GGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred ---CCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 11223567788899999999999764
No 175
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=5.1e-35 Score=294.07 Aligned_cols=244 Identities=21% Similarity=0.447 Sum_probs=196.2
Q ss_pred hcccCcCCceEEEEEEEc-CCc---EEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGT---TVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~---~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 412 (627)
.+.||+|+||.||+|+.. ++. .+++|.+.... ...+++..|++++..+ +|+|++++.+++...+..++||||+
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (268)
T cd05063 10 QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQF-SHHNIIRLEGVVTKFKPAMIITEYM 88 (268)
T ss_pred eeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEccCCCcEEEEEcC
Confidence 478999999999999965 233 69999886542 2346788999999999 9999999999999999999999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT 492 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~ 492 (627)
++++|.+++.... ..+++..+..++.|++.|++|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 89 ~~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 161 (268)
T cd05063 89 ENGALDKYLRDHD----GEFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDP 161 (268)
T ss_pred CCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCccceeccccc
Confidence 9999999997542 35899999999999999999999998 9999999999999999999999999987654321
Q ss_pred CC-------CCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006884 493 TA-------TRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 493 ~~-------~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
.. ..+..|+|||++....++.++||||||+++||+++ |+.||..... ......+.....
T Consensus 162 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~------~~~~~~i~~~~~------- 228 (268)
T cd05063 162 EGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN------HEVMKAINDGFR------- 228 (268)
T ss_pred ccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH------HHHHHHHhcCCC-------
Confidence 11 12346999999988889999999999999999997 9999965321 122222211110
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006884 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~ 607 (627)
.+...+....+.+++.+||+.+|++||++++|++.|+++
T Consensus 229 ----~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 229 ----LPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred ----CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 011112334678899999999999999999999999876
No 176
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.4e-35 Score=301.06 Aligned_cols=253 Identities=25% Similarity=0.414 Sum_probs=198.7
Q ss_pred HhcccCcCCceEEEEEEEc--------CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeE
Q 006884 338 SAEVLGKGSYGSTYKAILE--------DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLV 407 (627)
Q Consensus 338 ~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~l 407 (627)
..+.||+|+||.||++... +...+|+|.++.... ...++..|++++..+.+||||+++++++...+..++
T Consensus 16 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 95 (314)
T cd05099 16 LGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYV 95 (314)
T ss_pred eeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEE
Confidence 3578999999999999742 245789998875432 245688899999998779999999999998889999
Q ss_pred EEecCCCCcHHHHhhhcCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC
Q 006884 408 VYSYMPAGSLFMLLHRNRS-----------DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN 476 (627)
Q Consensus 408 v~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~ 476 (627)
++||+++|+|.+++..... .....+++....+++.|++.||.|||+.+ ++||||||+||+++.++.
T Consensus 96 v~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill~~~~~ 172 (314)
T cd05099 96 IVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR---CIHRDLAARNVLVTEDNV 172 (314)
T ss_pred EEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeeccccceeEEEcCCCc
Confidence 9999999999999976431 11245899999999999999999999998 999999999999999999
Q ss_pred eEEeecccccccCCCC------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHH
Q 006884 477 GCISDVGLAHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWV 549 (627)
Q Consensus 477 ~ki~DfG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~ 549 (627)
+||+|||.++...... ...++..|+|||++.+..++.++||||||+++|||++ |+.||...... ...
T Consensus 173 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~------~~~ 246 (314)
T cd05099 173 MKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE------ELF 246 (314)
T ss_pred EEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH------HHH
Confidence 9999999998654321 1123457999999988889999999999999999999 88898653211 111
Q ss_pred HHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 550 RSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 550 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
. ......... .......++.+++.+||..+|++||++.|+++.|+++...
T Consensus 247 ~-~~~~~~~~~----------~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 296 (314)
T cd05099 247 K-LLREGHRMD----------KPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA 296 (314)
T ss_pred H-HHHcCCCCC----------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence 1 111111100 0111223566788999999999999999999999998653
No 177
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=3.3e-35 Score=298.22 Aligned_cols=251 Identities=23% Similarity=0.370 Sum_probs=195.0
Q ss_pred HhcccCcCCceEEEEEEE-----cCCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeC--CceeEE
Q 006884 338 SAEVLGKGSYGSTYKAIL-----EDGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSK--DEKLVV 408 (627)
Q Consensus 338 ~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~--~~~~lv 408 (627)
..+.||+|+||.||.+.+ .++..||+|.++.... ..+.+.+|+++++.+ +|||++++.+++... ...++|
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv 86 (284)
T cd05079 8 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL-YHENIVKYKGICTEDGGNGIKLI 86 (284)
T ss_pred hceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhC-CCCCeeeeeeEEecCCCCceEEE
Confidence 357899999999999974 2578899999865422 345789999999999 999999999998775 567899
Q ss_pred EecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 409 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
|||+++++|.+++.+.. ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++..
T Consensus 87 ~e~~~g~~L~~~l~~~~----~~~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05079 87 MEFLPSGSLKEYLPRNK----NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAI 159 (284)
T ss_pred EEccCCCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEcCCCCEEECCCcccccc
Confidence 99999999999997542 35899999999999999999999998 999999999999999999999999999866
Q ss_pred CCCC-------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCC---------CCCCHHHHHHHH
Q 006884 489 NFPT-------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHD---------DVVDLPRWVRSV 552 (627)
Q Consensus 489 ~~~~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~---------~~~~~~~~~~~~ 552 (627)
.... ...++..|+|||++.+..++.++||||||+++|||++++.|+...... .......+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 238 (284)
T cd05079 160 ETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRV- 238 (284)
T ss_pred ccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHH-
Confidence 4321 223456799999998888999999999999999999987764321100 00011111111
Q ss_pred hhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006884 553 VREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607 (627)
Q Consensus 553 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~ 607 (627)
...... ..........+.+++.+|++.+|++||++.++++.|+++
T Consensus 239 ~~~~~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 239 LEEGKR----------LPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHcCcc----------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 111100 001112335678899999999999999999999999876
No 178
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=8.3e-36 Score=306.43 Aligned_cols=252 Identities=19% Similarity=0.354 Sum_probs=190.6
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|+.+ +++.||+|.++... .....+.+|++++.++ +||||+++++++..++..++||||+++
T Consensus 11 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~- 88 (309)
T cd07872 11 LEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDL-KHANIVTLHDIVHTDKSLTLVFEYLDK- 88 (309)
T ss_pred EEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhC-CCCCcceEEEEEeeCCeEEEEEeCCCC-
Confidence 467999999999999965 57889999986442 2345677899999999 999999999999999999999999975
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~---- 491 (627)
+|.+++... +..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 89 ~l~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 161 (309)
T cd07872 89 DLKQYMDDC----GNIMSMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTY 161 (309)
T ss_pred CHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECccccceecCCCcccc
Confidence 888887654 235789999999999999999999998 999999999999999999999999998765332
Q ss_pred CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhh----ccc-----ccc
Q 006884 492 TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVRE----EWT-----AEV 561 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~----~~~-----~~~ 561 (627)
....+++.|+|||++.+ ..++.++||||||+++|||++|+.||...+..+... ........ .+. ...
T Consensus 162 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
T cd07872 162 SNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELH---LIFRLLGTPTEETWPGISSNDEF 238 (309)
T ss_pred ccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH---HHHHHhCCCCHHHHhhhcchhhh
Confidence 22346789999998865 568899999999999999999999997654322111 00000000 000 000
Q ss_pred cchhhhcCC------ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 562 FDVELLKYQ------DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 562 ~d~~l~~~~------~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.+....... .......++.+++.+|++.+|.+|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 239 KNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 000000000 00112235668889999999999999999987
No 179
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=5.2e-35 Score=291.72 Aligned_cols=241 Identities=27% Similarity=0.388 Sum_probs=196.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccc---ccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV---AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|++|.||++..+ +++.|++|.+... ....+.+.+|+++++.+ +|||++++++++...+..++|+||+++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd08529 5 LNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKL-DSSYIIRYYESFLDKGKLNIVMEYAEN 83 (256)
T ss_pred eEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhc-CCCCeehheeeeccCCEEEEEEEeCCC
Confidence 367999999999999965 6889999988643 23456788899999999 999999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC--
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-- 492 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~-- 492 (627)
++|.++++... ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++......
T Consensus 84 ~~L~~~l~~~~---~~~~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~ 157 (256)
T cd08529 84 GDLHKLLKMQR---GRPLPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNF 157 (256)
T ss_pred CcHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCCCCEEEcccccceeccCccch
Confidence 99999998642 346899999999999999999999988 9999999999999999999999999988664332
Q ss_pred --CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 493 --TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 493 --~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
...+++.|+|||+..+..++.++||||||+++|||++|+.||..... ........... ...
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~-~~~---------- 220 (256)
T cd08529 158 ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ------GALILKIIRGV-FPP---------- 220 (256)
T ss_pred hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHcCC-CCC----------
Confidence 23467889999999998899999999999999999999999975431 11111111111 000
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
........+.+++.+||+.+|++||++.++++.
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 221 VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred CccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 001233467889999999999999999999764
No 180
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=2.2e-35 Score=328.82 Aligned_cols=252 Identities=25% Similarity=0.341 Sum_probs=198.0
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.. +++.||+|++..... ..+++.+|++++.++ +||||+++++++.+++..+++|||++
T Consensus 7 i~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L-~HPNIVkl~~v~~d~~~lyLVMEY~e 85 (932)
T PRK13184 7 IRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADL-IHPGIVPVYSICSDGDPVYYTMPYIE 85 (932)
T ss_pred EEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhC-CCcCcCeEEEEEeeCCEEEEEEEcCC
Confidence 468999999999999965 588999999875321 245788999999999 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCC------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccc
Q 006884 414 AGSLFMLLHRNRS------DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHL 487 (627)
Q Consensus 414 ~gsL~~~l~~~~~------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~ 487 (627)
+|+|.+++..... ......++..+++++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 86 GGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~dg~vKLiDFGLAk~ 162 (932)
T PRK13184 86 GYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLGLFGEVVILDWGAAIF 162 (932)
T ss_pred CCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEcCCCCEEEEecCccee
Confidence 9999999875321 11234677888999999999999999998 99999999999999999999999999976
Q ss_pred cCC----------------------CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCH
Q 006884 488 INF----------------------PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545 (627)
Q Consensus 488 ~~~----------------------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~ 545 (627)
... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.........
T Consensus 163 i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~-- 240 (932)
T PRK13184 163 KKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKIS-- 240 (932)
T ss_pred cccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhh--
Confidence 511 01134789999999999999999999999999999999999999753221110
Q ss_pred HHHHHHHhhhcccccccch-hhhcCCChHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHhhccc
Q 006884 546 PRWVRSVVREEWTAEVFDV-ELLKYQDVEEEMVQMLQIALSCVAKVPDSRP-KMDDVVRMIEQIQQP 610 (627)
Q Consensus 546 ~~~~~~~~~~~~~~~~~d~-~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-s~~ev~~~L~~~~~~ 610 (627)
... ...++ ..... .+....+.+++.+|++.+|++|| +++++.+.|+.+.+.
T Consensus 241 --------~~~---~i~~P~~~~p~---~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~ 293 (932)
T PRK13184 241 --------YRD---VILSPIEVAPY---REIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQG 293 (932)
T ss_pred --------hhh---hccChhhcccc---ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 000 00000 00001 12223566788899999999995 677888888887554
No 181
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.2e-35 Score=296.52 Aligned_cols=244 Identities=23% Similarity=0.320 Sum_probs=192.0
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
.+.||+|+||.||+|+.. +++.||+|++.... .....+.+|+.++..+ +||||+++++.+...+..++|+||+++++
T Consensus 14 ~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~-~h~~ii~~~~~~~~~~~~~iv~e~~~~~~ 92 (267)
T cd06646 14 IQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKEC-KHCNIVAYFGSYLSREKLWICMEYCGGGS 92 (267)
T ss_pred hheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhc-CCCCeeeeeEEEEeCCEEEEEEeCCCCCc
Confidence 477999999999999964 68899999986442 2345678899999999 99999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----C
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----T 492 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~----~ 492 (627)
|.++++.. ..+++..+..++.|++.|+.|||+.+ |+||||||+||+++.++.++|+|||+++..... .
T Consensus 93 L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (267)
T cd06646 93 LQDIYHVT-----GPLSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRK 164 (267)
T ss_pred HHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEECcCccceeecccccccC
Confidence 99998753 35889999999999999999999988 999999999999999999999999999765322 2
Q ss_pred CCCCCccccCccccC---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 493 TATRTIGYRAPEVTE---TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
...++..|+|||.+. ...++.++||||||+++|||++|+.||......+... ...... ...+. .
T Consensus 165 ~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~------~~~~~~----~~~~~---~ 231 (267)
T cd06646 165 SFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF------LMSKSN----FQPPK---L 231 (267)
T ss_pred ccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe------eeecCC----CCCCC---C
Confidence 334678899999874 3457889999999999999999999986432111100 000000 00000 0
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMI 604 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L 604 (627)
.........+.+++.+||+.+|++||+++++++.|
T Consensus 232 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 232 KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 11112234677888999999999999999998754
No 182
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.9e-35 Score=298.68 Aligned_cols=247 Identities=26% Similarity=0.396 Sum_probs=196.2
Q ss_pred hcccCcCCceEEEEEEEcC------CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILED------GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|..++ +..||+|.+..... ....+.+|+.++..+ +|+||+++++++......++|||
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~~v~e 89 (277)
T cd05032 11 IRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEF-NCHHVVRLLGVVSTGQPTLVVME 89 (277)
T ss_pred EeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhC-CCCceeEEEEEEcCCCCcEEEEe
Confidence 4789999999999998652 36899999864432 245688899999998 89999999999999999999999
Q ss_pred cCCCCcHHHHhhhcCCC-----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccc
Q 006884 411 YMPAGSLFMLLHRNRSD-----GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA 485 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a 485 (627)
|+++|+|.+++...... ....++|..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++
T Consensus 90 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~~~~kl~dfg~~ 166 (277)
T cd05032 90 LMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVAEDLTVKIGDFGMT 166 (277)
T ss_pred cCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEcCCCCEEECCcccc
Confidence 99999999999754321 1235789999999999999999999988 999999999999999999999999998
Q ss_pred cccCCC------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006884 486 HLINFP------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 486 ~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
+..... ....++..|+|||.+.+..++.++||||||+++||+++ |+.||...... +.... ......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~------~~~~~-~~~~~~ 239 (277)
T cd05032 167 RDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE------EVLKF-VIDGGH 239 (277)
T ss_pred hhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH------HHHHH-HhcCCC
Confidence 765332 12335678999999988889999999999999999998 99998653221 11111 111111
Q ss_pred ccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 006884 559 AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQ 606 (627)
Q Consensus 559 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~ 606 (627)
... .......+.+++.+||+.+|++|||+.++++.|+.
T Consensus 240 ~~~----------~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 240 LDL----------PENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred CCC----------CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 000 11124467789999999999999999999998863
No 183
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=5.3e-35 Score=292.87 Aligned_cols=245 Identities=26% Similarity=0.401 Sum_probs=189.2
Q ss_pred cccCcCCceEEEEEEEc----CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEee-CCceeEEEecC
Q 006884 340 EVLGKGSYGSTYKAILE----DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYS-KDEKLVVYSYM 412 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~-~~~~~lv~e~~ 412 (627)
+.||+|+||.||+|... ++..||+|.+.... ...+.+.+|+.+++.+ +|||++++++++.. ++..++++||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~lv~e~~ 79 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDF-SHPNVLSLLGICLPSEGSPLVVLPYM 79 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccC-CCCCcceEEEEeecCCCCcEEEEecC
Confidence 46899999999999854 23579999875432 2345788899999998 99999999998764 45678999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT 492 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~ 492 (627)
.+|+|.+++.... ...++.....++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++......
T Consensus 80 ~~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~ 152 (262)
T cd05058 80 KHGDLRNFIRSET----HNPTVKDLIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLDESFTVKVADFGLARDIYDKE 152 (262)
T ss_pred CCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCccccccccCCc
Confidence 9999999997542 24678888999999999999999988 9999999999999999999999999987553211
Q ss_pred --------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhC-CCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006884 493 --------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTG-KAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 493 --------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
...++..|+|||+..+..++.++||||||+++|||++| ..||.... ...............
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~------~~~~~~~~~~~~~~~---- 222 (262)
T cd05058 153 YYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD------SFDITVYLLQGRRLL---- 222 (262)
T ss_pred ceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHHhcCCCCC----
Confidence 12245679999999888999999999999999999995 55665321 111122111111000
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006884 564 VELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 609 (627)
.. ......+.+++.+||..+|++||++.|+++.|+++..
T Consensus 223 ----~~---~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 223 ----QP---EYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred ----CC---CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 00 1112357789999999999999999999999998753
No 184
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=3.4e-35 Score=294.07 Aligned_cols=244 Identities=25% Similarity=0.463 Sum_probs=197.3
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHH
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 418 (627)
.+.||+|+||.||++...++..+|+|.+.......+.+.+|+++++.+ +|+|++++.+.+.. ...+++|||+++|+|.
T Consensus 11 ~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~ 88 (260)
T cd05073 11 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVKLHAVVTK-EPIYIITEFMAKGSLL 88 (260)
T ss_pred EeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhc-CCCCcceEEEEEcC-CCeEEEEEeCCCCcHH
Confidence 478999999999999987788899998876544567789999999999 89999999999877 7789999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCC-----
Q 006884 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTT----- 493 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~----- 493 (627)
+++.... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||.+........
T Consensus 89 ~~~~~~~---~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 162 (260)
T cd05073 89 DFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 162 (260)
T ss_pred HHHHhCC---ccccCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccC
Confidence 9997642 346889999999999999999999988 99999999999999999999999999876543211
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
..++..|+|||++....++.++||||||+++|++++ |+.||...... .+..+ ....... ...
T Consensus 163 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~---~~~~~----~~~~~~~----------~~~ 225 (260)
T cd05073 163 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP---EVIRA----LERGYRM----------PRP 225 (260)
T ss_pred CcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH---HHHHH----HhCCCCC----------CCc
Confidence 223567999999988889999999999999999999 89999754211 11111 1111100 011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~ 607 (627)
......+.+++.+|++.+|++||++.++.+.|+.+
T Consensus 226 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~~ 260 (260)
T cd05073 226 ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 260 (260)
T ss_pred ccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhcC
Confidence 12234577888999999999999999999999863
No 185
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=5.7e-36 Score=316.26 Aligned_cols=241 Identities=18% Similarity=0.274 Sum_probs=188.1
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||++..+ +++.||||++.... ...+.+.+|++++..+ +||||+++++++.+.+..++||||++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~~~~~~~~~~~~~lv~E~~~ 84 (377)
T cd05629 6 VKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAES-DSPWVVSLYYSFQDAQYLYLIMEFLP 84 (377)
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCeeEEEEeCCC
Confidence 478999999999999865 68899999986532 1235678899999998 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 85 gg~L~~~l~~~-----~~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 156 (377)
T cd05629 85 GGDLMTMLIKY-----DTFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHD 156 (377)
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeecccccccccccc
Confidence 99999999754 35888999999999999999999998 999999999999999999999999998632110
Q ss_pred -------------------------------------------------CCCCCCccccCccccCCCCCCCcchhHHHHH
Q 006884 492 -------------------------------------------------TTATRTIGYRAPEVTETRKASQKSDVYSFGV 522 (627)
Q Consensus 492 -------------------------------------------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gv 522 (627)
....||+.|+|||++.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv 236 (377)
T cd05629 157 SAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGA 236 (377)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecch
Confidence 0135788999999999989999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCC---CCHHH
Q 006884 523 LLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSR---PKMDD 599 (627)
Q Consensus 523 vl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~R---Ps~~e 599 (627)
++|||++|+.||...... .....+.... ... .+..... ...++.+++.+|+. +|.+| +++.|
T Consensus 237 il~elltG~~Pf~~~~~~------~~~~~i~~~~--~~~---~~p~~~~---~s~~~~dli~~lL~-~~~~r~~r~~~~~ 301 (377)
T cd05629 237 IMFECLIGWPPFCSENSH------ETYRKIINWR--ETL---YFPDDIH---LSVEAEDLIRRLIT-NAENRLGRGGAHE 301 (377)
T ss_pred hhhhhhcCCCCCCCCCHH------HHHHHHHccC--Ccc---CCCCCCC---CCHHHHHHHHHHhc-CHhhcCCCCCHHH
Confidence 999999999999754321 1111111100 000 0000011 12345667778887 66665 69999
Q ss_pred HHHH
Q 006884 600 VVRM 603 (627)
Q Consensus 600 v~~~ 603 (627)
++++
T Consensus 302 ~l~h 305 (377)
T cd05629 302 IKSH 305 (377)
T ss_pred HhcC
Confidence 8875
No 186
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=4.6e-36 Score=312.25 Aligned_cols=195 Identities=27% Similarity=0.414 Sum_probs=171.6
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCC-----ceeceeeEEeeCCceeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHS-----NVVPVRAYYYSKDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~-----niv~~~~~~~~~~~~~lv~e~~ 412 (627)
.++||+|+||.|.++.+. +++.||||+++....-..+...|+.++..+.+|. |+|+++++|...++.|+|+|.+
T Consensus 191 ~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL 270 (586)
T KOG0667|consen 191 LEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELL 270 (586)
T ss_pred EEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhh
Confidence 578999999999999965 5899999999877666677788999999996443 7999999999999999999998
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC--CCeEEeecccccccCC
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD--LNGCISDVGLAHLINF 490 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~--~~~ki~DfG~a~~~~~ 490 (627)
. -+|+++++.++. ..++....+.++.||+.||.+||+.+ |||+||||+|||+.+. ..+||+|||.|.....
T Consensus 271 ~-~NLYellK~n~f---~Glsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q 343 (586)
T KOG0667|consen 271 S-TNLYELLKNNKF---RGLSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQ 343 (586)
T ss_pred h-hhHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCceeEEecccccccCC
Confidence 5 499999998764 45999999999999999999999998 9999999999999754 4789999999988754
Q ss_pred C-CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCC
Q 006884 491 P-TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHD 540 (627)
Q Consensus 491 ~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~ 540 (627)
. .++..+..|.|||++.+.+|+.+.||||||||+.||++|.+-|.+.++.
T Consensus 344 ~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~ 394 (586)
T KOG0667|consen 344 RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEY 394 (586)
T ss_pred cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHH
Confidence 3 3455677899999999999999999999999999999999888876543
No 187
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=3.1e-35 Score=292.62 Aligned_cols=241 Identities=25% Similarity=0.457 Sum_probs=195.2
Q ss_pred cccCcCCceEEEEEEEcCCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
++||+|+||.||++...+++.|++|.+..... ..+.+.+|+++++.+ .|+||+++++++......++|+||+++++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l 79 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQY-DHPNIVKLIGVCVQKQPIYIVMELVPGGSL 79 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCeEEEEEEEecCCCeEEEEEcCCCCcH
Confidence 46999999999999987799999998875433 346789999999999 899999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCC----
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTT---- 493 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~---- 493 (627)
.+++.... ..+++.....++.+++.|+.|||+.+ ++||||||+||+++.++.+||+|||.+........
T Consensus 80 ~~~l~~~~----~~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~ 152 (251)
T cd05041 80 LTFLRKKK----NRLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSD 152 (251)
T ss_pred HHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCCCcEEEeeccccccccCCcceecc
Confidence 99997542 35789999999999999999999998 99999999999999999999999999876542111
Q ss_pred --CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 494 --ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 494 --~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
...+..|+|||.+.+..++.++||||||+++|||++ |..||...... .. ......... ..
T Consensus 153 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~------~~-~~~~~~~~~----------~~ 215 (251)
T cd05041 153 GLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ------QT-RERIESGYR----------MP 215 (251)
T ss_pred ccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH------HH-HHHHhcCCC----------CC
Confidence 122456999999988899999999999999999999 88888654321 11 111111100 00
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~ 605 (627)
........+.+++.+|+..+|.+||++.|+++.|+
T Consensus 216 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 216 APQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred CCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 01122346788999999999999999999999886
No 188
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=3.3e-35 Score=298.28 Aligned_cols=243 Identities=24% Similarity=0.308 Sum_probs=192.3
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
+.||+|+||+||++... +++.||+|.+..... ....+.+|++++.++ +|+|++.+.+.+..++..++++||+++
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~ 84 (285)
T cd05632 6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKV-NSQFVVNLAYAYETKDALCLVLTIMNG 84 (285)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHc-CCcCceeEEEEEecCCEEEEEEEeccC
Confidence 67999999999999965 688999999865421 234577899999999 999999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
++|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||++++++.++|+|||++......
T Consensus 85 ~~L~~~~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 158 (285)
T cd05632 85 GDLKFHIYNMG---NPGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESI 158 (285)
T ss_pred ccHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCcceecCCCCcc
Confidence 99998886532 235899999999999999999999998 999999999999999999999999998765322
Q ss_pred CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006884 492 TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
....++..|+|||++.+..++.++||||||+++|||++|+.||........ ............ ..+
T Consensus 159 ~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~---~~~~~~~~~~~~--~~~--------- 224 (285)
T cd05632 159 RGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK---REEVDRRVLETE--EVY--------- 224 (285)
T ss_pred cCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHhhhccc--ccc---------
Confidence 234578899999999988999999999999999999999999975422110 111111111110 000
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 006884 572 VEEEMVQMLQIALSCVAKVPDSRPK-----MDDVVRM 603 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~P~~RPs-----~~ev~~~ 603 (627)
.......+.+++.+|++.+|++||+ +.+++.+
T Consensus 225 ~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 225 SAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred CccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 0112234567888999999999999 6677764
No 189
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=7.4e-36 Score=316.01 Aligned_cols=190 Identities=25% Similarity=0.366 Sum_probs=165.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.. +++.||+|++..... ..+.+.+|++++..+ +|+||+++++.+.+++..++||||++
T Consensus 6 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~-~h~~iv~~~~~~~~~~~~~lv~E~~~ 84 (382)
T cd05625 6 IKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDNLYFVMDYIP 84 (382)
T ss_pred EEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhC-CCCcCCeEEEEEEeCCEEEEEEeCCC
Confidence 478999999999999965 688999999865421 235678899999999 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC---
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF--- 490 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~--- 490 (627)
+|+|.+++.+. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 85 gg~L~~~l~~~-----~~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~ 156 (382)
T cd05625 85 GGDMMSLLIRM-----GIFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (382)
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCcccccccc
Confidence 99999999754 35788899999999999999999998 99999999999999999999999999753210
Q ss_pred ------------------------------------------------CCCCCCCccccCccccCCCCCCCcchhHHHHH
Q 006884 491 ------------------------------------------------PTTATRTIGYRAPEVTETRKASQKSDVYSFGV 522 (627)
Q Consensus 491 ------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gv 522 (627)
.....||+.|+|||++.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGv 236 (382)
T cd05625 157 SKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 236 (382)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechH
Confidence 01234788999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCC
Q 006884 523 LLLEMLTGKAPLQHS 537 (627)
Q Consensus 523 vl~el~tg~~pf~~~ 537 (627)
++|||++|+.||...
T Consensus 237 il~elltG~~Pf~~~ 251 (382)
T cd05625 237 ILYEMLVGQPPFLAQ 251 (382)
T ss_pred HHHHHHhCCCCCCCC
Confidence 999999999999754
No 190
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=6.3e-35 Score=293.65 Aligned_cols=244 Identities=23% Similarity=0.455 Sum_probs=195.1
Q ss_pred hcccCcCCceEEEEEEEcC-C---cEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAILED-G---TTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 412 (627)
.+.||+|+||.||+|..+. + ..||||.+.... ...++|..|+.++..+ +||||+++.+++..+...++|+||+
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv~e~~ 87 (269)
T cd05065 9 EEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF-DHPNIIHLEGVVTKSRPVMIITEFM 87 (269)
T ss_pred EeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCcCcceEEEEECCCCceEEEEecC
Confidence 5789999999999999653 3 369999987542 2346799999999999 9999999999999999999999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT 492 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~ 492 (627)
++|+|.+++.... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 88 ~~~~L~~~l~~~~----~~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~ 160 (269)
T cd05065 88 ENGALDSFLRQND----GQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 160 (269)
T ss_pred CCCcHHHHHhhCC----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCCccccccccCc
Confidence 9999999987542 35899999999999999999999998 9999999999999999999999999987653321
Q ss_pred C---C---C---CCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006884 493 T---A---T---RTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 493 ~---~---~---~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
. . . .+..|+|||++.+..++.++||||||+++||+++ |..||...... ....++ .....
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~---~~~~~i----~~~~~---- 229 (269)
T cd05065 161 SDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ---DVINAI----EQDYR---- 229 (269)
T ss_pred cccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH---HHHHHH----HcCCc----
Confidence 1 1 1 1347999999998999999999999999999886 99999754211 111111 11100
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006884 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~ 607 (627)
.....+....+.+++.+||..+|.+||++++++..|+++
T Consensus 230 ------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 230 ------LPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 001112234567888999999999999999999999875
No 191
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.4e-35 Score=300.26 Aligned_cols=247 Identities=25% Similarity=0.409 Sum_probs=194.8
Q ss_pred hcccCcCCceEEEEEEEc------CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILE------DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||.||++... ++..+++|.+.... .....+.+|++++..+ +|+||+++++++...+..++++||
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~ 88 (280)
T cd05092 10 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVL-QHQHIVRFYGVCTEGRPLLMVFEY 88 (280)
T ss_pred ccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcC-CCCCCceEEEEEecCCceEEEEec
Confidence 478999999999999742 35678999876543 2356789999999999 999999999999999999999999
Q ss_pred CCCCcHHHHhhhcCCC----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEee
Q 006884 412 MPAGSLFMLLHRNRSD----------GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISD 481 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~D 481 (627)
+++|+|.+++...... ....+++..+..++.|++.|++|||+.+ ++||||||+||++++++.+||+|
T Consensus 89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~~~~kL~d 165 (280)
T cd05092 89 MRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVGQGLVVKIGD 165 (280)
T ss_pred CCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEcCCCCEEECC
Confidence 9999999999764310 1135889999999999999999999998 99999999999999999999999
Q ss_pred cccccccCCC------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhh
Q 006884 482 VGLAHLINFP------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVR 554 (627)
Q Consensus 482 fG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~ 554 (627)
||+++..... ....+++.|+|||++.+..++.++||||||+++|||++ |+.||...... ........
T Consensus 166 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~------~~~~~~~~ 239 (280)
T cd05092 166 FGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT------EAIECITQ 239 (280)
T ss_pred CCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH------HHHHHHHc
Confidence 9998755322 12224578999999998899999999999999999998 89998643221 11111111
Q ss_pred hcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 006884 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQ 606 (627)
Q Consensus 555 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~ 606 (627)
.. ... ........+.+++.+||+.+|.+||+++||.+.|++
T Consensus 240 ~~-~~~----------~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 240 GR-ELE----------RPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred Cc-cCC----------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 10 000 001122356788899999999999999999998863
No 192
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=4.2e-36 Score=317.24 Aligned_cols=241 Identities=21% Similarity=0.302 Sum_probs=188.1
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+++.. +++.||+|++.... ...+.+.+|++++..+ +|+||+++++.+.+++..++||||++
T Consensus 6 ~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~lv~E~~~ 84 (376)
T cd05598 6 IKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEA-DNEWVVKLYYSFQDKDNLYFVMDYIP 84 (376)
T ss_pred EEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCEEEEEEeCCC
Confidence 468999999999999965 58899999986532 2345678899999999 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC---
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF--- 490 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~--- 490 (627)
+|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 85 ~g~L~~~i~~~-----~~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~ 156 (376)
T cd05598 85 GGDMMSLLIRL-----GIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (376)
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCcccccccc
Confidence 99999999754 35788888999999999999999998 99999999999999999999999999753210
Q ss_pred --------------------------------------------CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHH
Q 006884 491 --------------------------------------------PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLE 526 (627)
Q Consensus 491 --------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~e 526 (627)
.....||+.|+|||++.+..++.++|||||||++||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye 236 (376)
T cd05598 157 SKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 236 (376)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeee
Confidence 012357889999999999999999999999999999
Q ss_pred HHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCC---CHHHHHHH
Q 006884 527 MLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRP---KMDDVVRM 603 (627)
Q Consensus 527 l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RP---s~~ev~~~ 603 (627)
|++|+.||...... .....+... .... ......... ..+.+++.+|+ .+|.+|+ ++.|++++
T Consensus 237 ll~G~~Pf~~~~~~------~~~~~i~~~--~~~~---~~~~~~~~s---~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 237 MLVGQPPFLADTPA------ETQLKVINW--ETTL---HIPSQAKLS---REASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred hhhCCCCCCCCCHH------HHHHHHhcc--Cccc---cCCCCCCCC---HHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 99999999764321 111111100 0000 000111122 23445555655 5999999 89999875
No 193
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=3.2e-35 Score=300.15 Aligned_cols=254 Identities=22% Similarity=0.356 Sum_probs=195.2
Q ss_pred hcccCcCCceEEEEEEEc-----------------CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEE
Q 006884 339 AEVLGKGSYGSTYKAILE-----------------DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYY 399 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~ 399 (627)
.+.||+|+||.||++... +...||+|++..... ...++.+|++++..+ +|+||+++++++
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~ 88 (296)
T cd05095 10 KEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRL-KDPNIIRLLAVC 88 (296)
T ss_pred eeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEE
Confidence 467999999999998633 234689999875422 346789999999999 999999999999
Q ss_pred eeCCceeEEEecCCCCcHHHHhhhcCCC------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC
Q 006884 400 YSKDEKLVVYSYMPAGSLFMLLHRNRSD------GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ 473 (627)
Q Consensus 400 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~ 473 (627)
...+..++||||+++|+|.+++...... ....+++..+..++.|++.||+|||+.+ ++||||||+||+++.
T Consensus 89 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dlkp~Nili~~ 165 (296)
T cd05095 89 ITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN---FVHRDLATRNCLVGK 165 (296)
T ss_pred ecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---eecccCChheEEEcC
Confidence 9999999999999999999999764321 1235788999999999999999999998 999999999999999
Q ss_pred CCCeEEeecccccccCCCC------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh--CCCCCCCCCCCCCCCH
Q 006884 474 DLNGCISDVGLAHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT--GKAPLQHSGHDDVVDL 545 (627)
Q Consensus 474 ~~~~ki~DfG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t--g~~pf~~~~~~~~~~~ 545 (627)
++.++|+|||+++...... ....+..|+|||...++.++.++||||||+++|||++ |..||......+ .
T Consensus 166 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~---~ 242 (296)
T cd05095 166 NYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ---V 242 (296)
T ss_pred CCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH---H
Confidence 9999999999997653321 1223567999999888889999999999999999998 778886432211 1
Q ss_pred HHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 006884 546 PRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQ 606 (627)
Q Consensus 546 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~ 606 (627)
................. .....+...+.+++.+||+.+|++||++.||.+.|++
T Consensus 243 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 243 IENTGEFFRDQGRQVYL-------PKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred HHHHHHHHhhccccccC-------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 11111111111110000 0011223567789999999999999999999999864
No 194
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=2e-35 Score=305.32 Aligned_cols=233 Identities=22% Similarity=0.306 Sum_probs=187.2
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||++..+ +++.||+|++.... ...+.+..|.+++..+.+|++|+++.+++...+..++||||++
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~ 84 (323)
T cd05615 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVN 84 (323)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCC
Confidence 367999999999999965 68899999987542 2234577788888888677888899999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 85 ~g~L~~~i~~~-----~~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~ 156 (323)
T cd05615 85 GGDLMYHIQQV-----GKFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGV 156 (323)
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeccccccccCCCCc
Confidence 99999998754 35899999999999999999999998 999999999999999999999999998754322
Q ss_pred --CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 492 --TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+...... . .
T Consensus 157 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~------~~~~~i~~~~~~-------~--p 221 (323)
T cd05615 157 TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED------ELFQSIMEHNVS-------Y--P 221 (323)
T ss_pred cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCCC-------C--C
Confidence 2344789999999999889999999999999999999999999754321 111121111100 0 0
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKM 597 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~ 597 (627)
.....++.+++.+|++.+|.+|++.
T Consensus 222 ---~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 222 ---KSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred ---ccCCHHHHHHHHHHcccCHhhCCCC
Confidence 1112356678889999999999985
No 195
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=4.3e-35 Score=292.37 Aligned_cols=240 Identities=25% Similarity=0.390 Sum_probs=195.9
Q ss_pred hcccCcCCceEEEEEEEcC-CcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 339 AEVLGKGSYGSTYKAILED-GTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
.+.||+|+||.||+|..++ ++.+++|.+..... .+++.+|+++++.+ +|+|++++++++......++++||+++++|
T Consensus 8 ~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L 85 (256)
T cd06612 8 LEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQC-DSPYIVKYYGSYFKNTDLWIVMEYCGAGSV 85 (256)
T ss_pred hhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhC-CCCcEeeeeeeeecCCcEEEEEecCCCCcH
Confidence 4679999999999999764 78999999865433 67899999999999 999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC----C
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT----T 493 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~----~ 493 (627)
.+++... ...+++..+..++.|++.|+.|||+.+ ++||||+|+||+++.++.++|+|||++....... .
T Consensus 86 ~~~l~~~----~~~l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~ 158 (256)
T cd06612 86 SDIMKIT----NKTLTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNT 158 (256)
T ss_pred HHHHHhC----ccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccchhcccCcccccc
Confidence 9999753 246899999999999999999999998 9999999999999999999999999988764332 2
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChH
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVE 573 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 573 (627)
..++..|+|||++.+..++.++||||||+++|+|++|+.||......... .. ...... . ......
T Consensus 159 ~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~------~~-~~~~~~-----~---~~~~~~ 223 (256)
T cd06612 159 VIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAI------FM-IPNKPP-----P---TLSDPE 223 (256)
T ss_pred ccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhh------hh-hccCCC-----C---CCCchh
Confidence 34678899999999889999999999999999999999999754321100 00 000000 0 001111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 574 EEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 574 ~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.....+.+++.+||+.+|++|||+.|+++
T Consensus 224 ~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 224 KWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred hcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 22345778888999999999999999976
No 196
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=2.8e-35 Score=300.42 Aligned_cols=254 Identities=20% Similarity=0.333 Sum_probs=193.1
Q ss_pred hcccCcCCceEEEEEEEcC---------------CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEee
Q 006884 339 AEVLGKGSYGSTYKAILED---------------GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~ 401 (627)
.+.||+|+||.||+++..+ ...||+|.++.... ....+.+|++++.++ +|+|++++++++..
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~ 88 (295)
T cd05097 10 KEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRL-KNPNIIRLLGVCVS 88 (295)
T ss_pred hhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCcCeEEEEEcC
Confidence 4679999999999987542 23589998875422 245688999999999 99999999999999
Q ss_pred CCceeEEEecCCCCcHHHHhhhcCCC-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC
Q 006884 402 KDEKLVVYSYMPAGSLFMLLHRNRSD-------GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD 474 (627)
Q Consensus 402 ~~~~~lv~e~~~~gsL~~~l~~~~~~-------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~ 474 (627)
.+..++||||+++++|.+++...... ....+++..++.++.|++.||.|||+.+ ++||||||+||+++++
T Consensus 89 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nill~~~ 165 (295)
T cd05097 89 DDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN---FVHRDLATRNCLVGNH 165 (295)
T ss_pred CCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC---eeccccChhhEEEcCC
Confidence 99999999999999999999653210 1124788999999999999999999998 9999999999999999
Q ss_pred CCeEEeecccccccCCCC------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh--CCCCCCCCCCCCCCCHH
Q 006884 475 LNGCISDVGLAHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT--GKAPLQHSGHDDVVDLP 546 (627)
Q Consensus 475 ~~~ki~DfG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t--g~~pf~~~~~~~~~~~~ 546 (627)
+.+||+|||+++...... ...++..|+|||+..+..++.++||||||+++|||++ +..||......+ ..
T Consensus 166 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~---~~ 242 (295)
T cd05097 166 YTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ---VI 242 (295)
T ss_pred CcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH---HH
Confidence 999999999987653221 1223568999999988889999999999999999998 567776532211 11
Q ss_pred HHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 006884 547 RWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQ 606 (627)
Q Consensus 547 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~ 606 (627)
................. ..+.....+.+++.+||+.+|++||++.+|++.|++
T Consensus 243 ~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 243 ENTGEFFRNQGRQIYLS-------QTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred HHHHHhhhhccccccCC-------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 11111111100000000 001122467889999999999999999999998863
No 197
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.4e-35 Score=309.79 Aligned_cols=241 Identities=19% Similarity=0.272 Sum_probs=187.9
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+++.+ +++.||+|.+.... ...+.+.+|++++..+ +||||+++++++.+++..++||||++
T Consensus 48 ~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-~hp~iv~~~~~~~~~~~~~lv~Ey~~ 126 (370)
T cd05621 48 VKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFCAFQDDKYLYMVMEYMP 126 (370)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEEEcCCC
Confidence 467999999999999976 57899999986432 2344577888998888 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|.+++... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 127 gg~L~~~l~~~------~~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~ 197 (370)
T cd05621 127 GGDLVNLMSNY------DVPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM 197 (370)
T ss_pred CCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEecccceecccCCc
Confidence 99999999643 3788899999999999999999998 999999999999999999999999999876432
Q ss_pred ---CCCCCCccccCccccCCC----CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006884 492 ---TTATRTIGYRAPEVTETR----KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 492 ---~~~~~t~~y~aPE~~~~~----~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
.+..||+.|+|||++.+. .++.++||||+||++|||++|+.||..... ......+........
T Consensus 198 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~------~~~~~~i~~~~~~~~---- 267 (370)
T cd05621 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL------VGTYSKIMDHKNSLN---- 267 (370)
T ss_pred eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCcccC----
Confidence 244589999999998654 378899999999999999999999975421 112222221111000
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCC--CCCCHHHHHHH
Q 006884 565 ELLKYQDVEEEMVQMLQIALSCVAKVPD--SRPKMDDVVRM 603 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~P~--~RPs~~ev~~~ 603 (627)
.... ......+.+++.+|+..++. .||+++|++++
T Consensus 268 -~p~~---~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 268 -FPED---VEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred -CCCc---ccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 0011 11123445667788875554 38999999886
No 198
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=5.2e-35 Score=296.49 Aligned_cols=252 Identities=24% Similarity=0.411 Sum_probs=198.8
Q ss_pred hcccCcCCceEEEEEEEc-----CCcEEEEEEecccccC--HHHHHHHHHHHHHhccCCceeceeeEEee--CCceeEEE
Q 006884 339 AEVLGKGSYGSTYKAILE-----DGTTVVVKRLREVAAT--KREFEQQMEVVGTIGKHSNVVPVRAYYYS--KDEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~--~~~~~~e~~~l~~l~~h~niv~~~~~~~~--~~~~~lv~ 409 (627)
.+.||+|+||.||++++. ++..||||.+...... .+.+.+|++++..+ .|+||+++++++.. ....++++
T Consensus 9 ~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv~ 87 (284)
T cd05038 9 IKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTL-DHENIVKYKGVCEKPGGRSLRLIM 87 (284)
T ss_pred heeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhC-CCCChheEEeeeecCCCCceEEEE
Confidence 378999999999999854 3678999999765543 67899999999999 99999999999877 55789999
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||+++++|.+++.... ..+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||.+....
T Consensus 88 e~~~~~~l~~~l~~~~----~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 88 EYLPSGSLRDYLQRHR----DQINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred ecCCCCCHHHHHHhCc----cccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 9999999999997653 25899999999999999999999998 9999999999999999999999999998765
Q ss_pred CCCC-------CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCC--------CHHHHHHHHhh
Q 006884 490 FPTT-------ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV--------DLPRWVRSVVR 554 (627)
Q Consensus 490 ~~~~-------~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~--------~~~~~~~~~~~ 554 (627)
.... ..++..|+|||...+..++.++||||||+++|||++|+.|+......... ...........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T cd05038 161 EDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLK 240 (284)
T ss_pred cCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHH
Confidence 3211 12345699999998889999999999999999999999998653221100 00011111111
Q ss_pred hcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhc
Q 006884 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQ 608 (627)
Q Consensus 555 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~ 608 (627)
... ..........++.+++.+||+.+|++||++.||+++|+.+.
T Consensus 241 ~~~----------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 241 EGE----------RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred cCC----------cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 100 00011122356788999999999999999999999999863
No 199
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.9e-35 Score=298.70 Aligned_cols=240 Identities=24% Similarity=0.362 Sum_probs=193.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
.+.||+|+||.||+|+.. +++.|++|.+.... ...+.+.+|++++..+ +|+|++++++.+......++||||+++++
T Consensus 25 ~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~-~h~~v~~~~~~~~~~~~~~lv~e~~~~~~ 103 (296)
T cd06654 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-KNPNIVNYLDSYLVGDELWVVMEYLAGGS 103 (296)
T ss_pred EEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhC-CCCCEeeEEEEEEeCCEEEEeecccCCCC
Confidence 367999999999999964 68899999886543 3356788899999998 99999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----C
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----T 492 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~----~ 492 (627)
|.+++... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++...... .
T Consensus 104 L~~~~~~~------~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 174 (296)
T cd06654 104 LTDVVTET------CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174 (296)
T ss_pred HHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccchhccccccccC
Confidence 99998642 4788999999999999999999998 999999999999999999999999998765332 2
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
...+++.|+|||.+.+..++.++|||||||++|+|++|+.||....... ......... ... . ...
T Consensus 175 ~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~------~~~~~~~~~-~~~-----~---~~~ 239 (296)
T cd06654 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR------ALYLIATNG-TPE-----L---QNP 239 (296)
T ss_pred cccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH------hHHHHhcCC-CCC-----C---CCc
Confidence 2357789999999988889999999999999999999999997543211 111111110 000 0 011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
......+.+++.+||..+|++||++.|++++
T Consensus 240 ~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 240 EKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred cccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 1223456778899999999999999999984
No 200
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5e-36 Score=308.95 Aligned_cols=239 Identities=22% Similarity=0.394 Sum_probs=193.0
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEeccc---c--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCc--eeEEEec
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREV---A--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDE--KLVVYSY 411 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~--~~lv~e~ 411 (627)
++||+|+|-+||+|.+. +|-.||--.++.. . ...+.|..|+++++.| +|+||++++.+|.+... ..+|+|.
T Consensus 46 evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL-~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 46 EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSL-KHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccC-CCCceeeeeeheecCCCceeeeeeec
Confidence 57999999999999965 4667765433221 1 2337899999999999 99999999999998765 6789999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC-CCeEEeecccccccCC
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD-LNGCISDVGLAHLINF 490 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~-~~~ki~DfG~a~~~~~ 490 (627)
+..|+|..|+++.+ .++......++.||++||.|||++. |||||||||.+||+|+.+ |.+||+|.|+|.....
T Consensus 125 ~TSGtLr~Y~kk~~-----~vn~kaik~W~RQILkGL~yLHs~~-PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~ 198 (632)
T KOG0584|consen 125 FTSGTLREYRKKHR-----RVNIKAIKSWCRQILKGLVYLHSQD-PPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK 198 (632)
T ss_pred ccCCcHHHHHHHhc-----cCCHHHHHHHHHHHHHHhhhhhcCC-CCccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence 99999999999875 4788899999999999999999987 899999999999999865 8999999999998765
Q ss_pred CC--CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006884 491 PT--TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 491 ~~--~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
+. ...|||.|||||... ..|++.+||||||+.++||+|+..||.. +.+..+..+++...... .. +..
T Consensus 199 s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsE-----C~n~AQIYKKV~SGiKP-~s----l~k 267 (632)
T KOG0584|consen 199 SHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSE-----CTNPAQIYKKVTSGIKP-AA----LSK 267 (632)
T ss_pred cccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhh-----hCCHHHHHHHHHcCCCH-HH----hhc
Confidence 43 346999999999997 7899999999999999999999999974 33333434443332222 11 111
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 569 YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
..+ .++.++|.+|+.. .++|||+.|+++
T Consensus 268 V~d-----Pevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 268 VKD-----PEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred cCC-----HHHHHHHHHHhcC-chhccCHHHHhh
Confidence 121 2456678899999 999999999987
No 201
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.1e-35 Score=297.30 Aligned_cols=244 Identities=27% Similarity=0.489 Sum_probs=193.3
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHH---HHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKR---EFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~---~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||+||++... +++.||+|++........ ...+|+.++.++ +||||+++++++......++||||+++
T Consensus 4 ~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~~v~~~~~~ 82 (260)
T PF00069_consen 4 VKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRL-RHPNIVQILDVFQDDNYLYIVMEYCPG 82 (260)
T ss_dssp EEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHH-TBTTBCHEEEEEEESSEEEEEEEEETT
T ss_pred eEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccc-ccccccccccccccccccccccccccc
Confidence 468999999999999976 466899999976643332 334589999999 999999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC----C
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN----F 490 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~----~ 490 (627)
++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||.+.... .
T Consensus 83 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~ 154 (260)
T PF00069_consen 83 GSLQDYLQKN-----KPLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSSVKLSENNEN 154 (260)
T ss_dssp EBHHHHHHHH-----SSBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSE
T ss_pred cccccccccc-----cccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc
Confidence 9999999843 35899999999999999999999998 9999999999999999999999999987531 1
Q ss_pred CCCCCCCccccCccccC-CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 491 PTTATRTIGYRAPEVTE-TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 491 ~~~~~~t~~y~aPE~~~-~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
.....++..|+|||+.. +..++.++||||+|+++|+|++|..||...... +............ .... .
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~---~~~~~~~~~~~~~-----~~~~---~ 223 (260)
T PF00069_consen 155 FNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD---DQLEIIEKILKRP-----LPSS---S 223 (260)
T ss_dssp BSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH---HHHHHHHHHHHTH-----HHHH---T
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccch---hhhhhhhhccccc-----cccc---c
Confidence 23345788999999998 888999999999999999999999999854111 1111111111100 0000 0
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.........+.+++.+||+.+|++||++.++++
T Consensus 224 ~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 224 QQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred cccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 011111257788899999999999999999975
No 202
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-37 Score=281.09 Aligned_cols=242 Identities=21% Similarity=0.342 Sum_probs=195.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccc---ccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV---AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|.|+.||+.... +|+.+|+|++... ..+.+++++|+.+-+.| +||||+++...+.+....++|+|+|.|
T Consensus 16 ~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~L-qHP~IvrL~~ti~~~~~~ylvFe~m~G 94 (355)
T KOG0033|consen 16 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFHYLVFDLVTG 94 (355)
T ss_pred HHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhc-CCCcEeehhhhhcccceeEEEEecccc
Confidence 467999999999998744 6889999887533 34678899999999999 999999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC---CCCeEEeecccccccCCC
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ---DLNGCISDVGLAHLINFP 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~---~~~~ki~DfG~a~~~~~~ 491 (627)
|+|..-+-.. ...++..+-..+.||+.+|.|+|..+ |||||+||+|+++.. ..-+|++|||+|..++..
T Consensus 95 ~dl~~eIV~R-----~~ySEa~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g 166 (355)
T KOG0033|consen 95 GELFEDIVAR-----EFYSEADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDG 166 (355)
T ss_pred hHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeeeccCCCceeecccceEEEeCCc
Confidence 9997766543 24788888999999999999999998 999999999999953 345799999999988743
Q ss_pred C---CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006884 492 T---TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 492 ~---~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
. ...|||+|||||++...+|+..+|||+.||+||-|+.|..||.+.+..+ ...++. ...+|..-..
T Consensus 167 ~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~r------lye~I~-----~g~yd~~~~~ 235 (355)
T KOG0033|consen 167 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR------LYEQIK-----AGAYDYPSPE 235 (355)
T ss_pred cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHH------HHHHHh-----ccccCCCCcc
Confidence 2 3568999999999999999999999999999999999999998643321 112222 1222322223
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 569 YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.....++.+ +++++|+..||.+|.|+.|.+++
T Consensus 236 w~~is~~Ak---~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 236 WDTVTPEAK---SLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred cCcCCHHHH---HHHHHHhccChhhhccHHHHhCC
Confidence 344455554 56679999999999999998764
No 203
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=5.8e-35 Score=293.83 Aligned_cols=245 Identities=27% Similarity=0.455 Sum_probs=193.7
Q ss_pred ccCcCCceEEEEEEEcC-------CcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEec
Q 006884 341 VLGKGSYGSTYKAILED-------GTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 341 ~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
.||+|+||.||+|+..+ +..+|+|.+.... ....++.+|+++++.+ +||||+++++++...+..++|+||
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNF-NHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhc-CCCCeeeEeeeecCCCCeEEEEec
Confidence 58999999999998653 2578999876543 3456788999999999 999999999999999999999999
Q ss_pred CCCCcHHHHhhhcCCC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC-----CeEEeeccc
Q 006884 412 MPAGSLFMLLHRNRSD--GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL-----NGCISDVGL 484 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~-----~~ki~DfG~ 484 (627)
+++|+|.+++...... ....+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++ .++++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcceEECCccc
Confidence 9999999999754321 1245789999999999999999999988 99999999999999887 899999999
Q ss_pred ccccCCC------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcc
Q 006884 485 AHLINFP------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEW 557 (627)
Q Consensus 485 a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 557 (627)
++..... .....+..|+|||++.+..++.++||||||+++|||++ |+.||..... .+....+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~------~~~~~~~~~~~~ 231 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN------QEVLQHVTAGGR 231 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH------HHHHHHHhcCCc
Confidence 8765322 12234578999999999899999999999999999998 9999864321 111111111100
Q ss_pred cccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 006884 558 TAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQ 606 (627)
Q Consensus 558 ~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~ 606 (627)
+ .........+.+++.+||..+|.+||++.++++.|++
T Consensus 232 ----~-------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 232 ----L-------QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred ----c-------CCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 0 0011223456788899999999999999999999864
No 204
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=5.9e-35 Score=299.89 Aligned_cols=254 Identities=20% Similarity=0.299 Sum_probs=193.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||++... ++..+|+|.+..... ...++.+|++++.++ +||||+++++++..++..++|+||++++
T Consensus 6 ~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ey~~~~ 84 (308)
T cd06615 6 LGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHEC-NSPYIVGFYGAFYSDGEISICMEHMDGG 84 (308)
T ss_pred EeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCEEEEEeeccCCC
Confidence 467999999999999965 578888888764322 235688899999999 9999999999999999999999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--C
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE-GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--T 492 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--~ 492 (627)
+|.+++... ..+++..+..++.|++.||.|||+. + ++||||||+||+++.++.+||+|||++...... .
T Consensus 85 ~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 156 (308)
T cd06615 85 SLDQVLKKA-----GRIPENILGKISIAVLRGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 156 (308)
T ss_pred cHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhhCC---EEECCCChHHEEEecCCcEEEccCCCcccccccccc
Confidence 999999754 3588999999999999999999974 5 999999999999999999999999998765332 3
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccc-------------
Q 006884 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTA------------- 559 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~------------- 559 (627)
...++..|+|||.+.+..++.++||||||+++|||++|+.||....... ...+...........
T Consensus 157 ~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (308)
T cd06615 157 SFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE---LEAMFGRPVSEGEAKESHRPVSGHPPDS 233 (308)
T ss_pred cCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhh---HHHhhcCccccccccCCcccccCCCCCc
Confidence 3457889999999988889999999999999999999999986432111 111110000000000
Q ss_pred -------cccchhhhc-CCC--hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006884 560 -------EVFDVELLK-YQD--VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMI 604 (627)
Q Consensus 560 -------~~~d~~l~~-~~~--~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L 604 (627)
+..+..... ... ......++.+++.+|+..+|++||++.+++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 234 PRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred cchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 000000000 000 001223577889999999999999999998864
No 205
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.2e-35 Score=311.23 Aligned_cols=251 Identities=19% Similarity=0.240 Sum_probs=188.1
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
.+.||+|+||.||++... .++.||||... ...+.+|+++++++ +|+||+++++++...+..++|+|++. ++|
T Consensus 174 ~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~-----~~~~~~E~~iL~~L-~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L 246 (461)
T PHA03211 174 HRALTPGSEGCVFESSHPDYPQRVVVKAGW-----YASSVHEARLLRRL-SHPAVLALLDVRVVGGLTCLVLPKYR-SDL 246 (461)
T ss_pred EEEEccCCCeEEEEEEECCCCCEEEEeccc-----ccCHHHHHHHHHHC-CCCCCCcEEEEEEECCEEEEEEEccC-CCH
Confidence 467999999999999976 47889999642 23467899999999 99999999999999999999999994 689
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC------
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP------ 491 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~------ 491 (627)
..++.... ..++|..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 247 ~~~l~~~~----~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 319 (461)
T PHA03211 247 YTYLGARL----RPLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFH 319 (461)
T ss_pred HHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCceecccccccccc
Confidence 88886532 36899999999999999999999998 999999999999999999999999999765322
Q ss_pred CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCC-CCCCHHHHHHHHhhhccc-cccc----chh
Q 006884 492 TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHD-DVVDLPRWVRSVVREEWT-AEVF----DVE 565 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~----d~~ 565 (627)
....||..|+|||++.+..++.++|||||||++|||++|..|+...... ........+..++..... ...+ ...
T Consensus 320 ~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~ 399 (461)
T PHA03211 320 YGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSR 399 (461)
T ss_pred cccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchH
Confidence 1235789999999999999999999999999999999988665332211 111111111111111000 0000 000
Q ss_pred h-------------h--cCCChH---HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 566 L-------------L--KYQDVE---EEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 566 l-------------~--~~~~~~---~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
+ . ...... .....+.+++.+||+.||.+|||+.|++++
T Consensus 400 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 400 LVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0 0 000000 111256778899999999999999999875
No 206
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=4.2e-35 Score=293.76 Aligned_cols=240 Identities=21% Similarity=0.301 Sum_probs=192.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc------CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA------TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|++|.||++... +++.||+|.+..... ..+.+.+|++++.++ +||||+++++++..++..++|+||
T Consensus 7 ~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~ 85 (263)
T cd06625 7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL-QHERIVQYYGCLRDDETLSIFMEY 85 (263)
T ss_pred cceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhC-CCCCeeeeEEEEccCCeEEEEEEE
Confidence 478999999999999864 689999998864321 124688899999999 999999999999999999999999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 491 (627)
+++++|.+++... ..+++..+.+++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||+++.....
T Consensus 86 ~~~~~l~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~ 157 (263)
T cd06625 86 MPGGSVKDQLKAY-----GALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQTI 157 (263)
T ss_pred CCCCcHHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecccc
Confidence 9999999998754 35788999999999999999999998 999999999999999999999999998765321
Q ss_pred -------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006884 492 -------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 492 -------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
....++..|+|||++.+..++.++||||||+++|||++|+.||...... .............
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~~~~~----- 226 (263)
T cd06625 158 CSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM------AAIFKIATQPTNP----- 226 (263)
T ss_pred ccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH------HHHHHHhccCCCC-----
Confidence 1234567899999999988999999999999999999999999643211 1111111111000
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.........+.+++.+||..+|.+|||+.|++++
T Consensus 227 -----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 227 -----QLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred -----CCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 0011223356778889999999999999999875
No 207
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=6.2e-35 Score=293.38 Aligned_cols=244 Identities=23% Similarity=0.481 Sum_probs=195.4
Q ss_pred hcccCcCCceEEEEEEEc-C---CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAILE-D---GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 412 (627)
.+.||+|+||.||+|... + +..+|+|.++.... ..+.+..|++++.++ +||||+++++++..++..++||||+
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (267)
T cd05066 9 EKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQF-DHPNIIHLEGVVTKSKPVMIVTEYM 87 (267)
T ss_pred eeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCccEEEEEcC
Confidence 478999999999999864 2 33799998865422 345788999999999 9999999999999999999999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT 492 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~ 492 (627)
++++|.+++.... ..+++..+..++.|++.|+.|||+.+ ++||||||+||+++.++.++++|||+++......
T Consensus 88 ~~~~L~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd05066 88 ENGSLDAFLRKHD----GQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 160 (267)
T ss_pred CCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCCCCccccccccc
Confidence 9999999997542 35899999999999999999999998 9999999999999999999999999998764322
Q ss_pred C-------CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006884 493 T-------ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 493 ~-------~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
. ..++..|+|||++.+..++.++||||||+++||+++ |+.||......+ . ...+. +...
T Consensus 161 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~---~---~~~~~-~~~~------ 227 (267)
T cd05066 161 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD---V---IKAIE-EGYR------ 227 (267)
T ss_pred ceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH---H---HHHHh-CCCc------
Confidence 1 112457999999998899999999999999999887 999997543211 1 11111 1100
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006884 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~ 607 (627)
..........+.+++.+|++.+|.+||++.++++.|+++
T Consensus 228 ----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 228 ----LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred ----CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 000111234567888899999999999999999999875
No 208
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.3e-34 Score=291.27 Aligned_cols=247 Identities=22% Similarity=0.352 Sum_probs=184.8
Q ss_pred ccCcCCceEEEEEEEcCCc---EEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 341 VLGKGSYGSTYKAILEDGT---TVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 341 ~lg~G~~g~Vy~~~~~~~~---~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.||+|+||.||++...++. .+++|.+.... ...+.+.+|+.++..+ +||||+++++.+......++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRIL-QHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhcc-CCcchhheEEEecCCCccEEEEecCCCC
Confidence 5999999999999854333 45666665432 2346788999999998 9999999999999999999999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC-----
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF----- 490 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~----- 490 (627)
+|.+++++.... ....++.....++.|++.||+|||+.+ ++||||||+|||++.++.+||+|||++.....
T Consensus 81 ~L~~~l~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 156 (268)
T cd05086 81 DLKSYLSQEQWH-RRNSQLLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIE 156 (268)
T ss_pred cHHHHHHhhhcc-cccccHHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccccccCcchhhh
Confidence 999999764321 234677778899999999999999988 99999999999999999999999999864321
Q ss_pred -CCCCCCCccccCccccCC-------CCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccc
Q 006884 491 -PTTATRTIGYRAPEVTET-------RKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEV 561 (627)
Q Consensus 491 -~~~~~~t~~y~aPE~~~~-------~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (627)
.....++..|+|||++.. ..++.++||||||+++|||++ |..||..... .+.......+. ....
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~------~~~~~~~~~~~-~~~~ 229 (268)
T cd05086 157 TEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD------REVLNHVIKDQ-QVKL 229 (268)
T ss_pred cccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHhhc-cccc
Confidence 123346788999998743 245789999999999999997 5678754321 22222222221 1122
Q ss_pred cchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 006884 562 FDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605 (627)
Q Consensus 562 ~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~ 605 (627)
.++.+.. . ....+.+++..|| .+|++||++++|++.|.
T Consensus 230 ~~~~~~~--~---~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 230 FKPQLEL--P---YSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCCccCC--C---CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 2222211 1 1234556777899 67999999999998874
No 209
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=6.9e-35 Score=296.44 Aligned_cols=247 Identities=22% Similarity=0.396 Sum_probs=195.8
Q ss_pred hcccCcCCceEEEEEEEc------CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILE------DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||++... ++..||+|.+..... ..+++.+|++++.++ .|||++++++++..++..++++|
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e 88 (288)
T cd05050 10 VRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-DHPNIVKLLGVCAVGKPMCLLFE 88 (288)
T ss_pred cccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhc-CCCchheEEEEEcCCCccEEEEe
Confidence 467999999999999864 467899999875432 346788999999999 99999999999999899999999
Q ss_pred cCCCCcHHHHhhhcCC-----------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC
Q 006884 411 YMPAGSLFMLLHRNRS-----------------DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ 473 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~-----------------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~ 473 (627)
|+++|+|.+++..... .....+++..++.++.|++.||.|||+.+ ++||||||+||+++.
T Consensus 89 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl~p~nil~~~ 165 (288)
T cd05050 89 YMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK---FVHRDLATRNCLVGE 165 (288)
T ss_pred cCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---eecccccHhheEecC
Confidence 9999999999975321 11235788999999999999999999998 999999999999999
Q ss_pred CCCeEEeecccccccCCC------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHH
Q 006884 474 DLNGCISDVGLAHLINFP------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLP 546 (627)
Q Consensus 474 ~~~~ki~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~ 546 (627)
++.++|+|||+++..... .....+..|+|||.+.+..++.++|||||||++|||++ |..||..... .
T Consensus 166 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~------~ 239 (288)
T cd05050 166 NMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH------E 239 (288)
T ss_pred CCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH------H
Confidence 999999999998764322 12234567999999988899999999999999999998 8888864322 1
Q ss_pred HHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 006884 547 RWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQ 606 (627)
Q Consensus 547 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~ 606 (627)
+...... ...... .......++.+++.+|++.+|++|||+.|+++.|++
T Consensus 240 ~~~~~~~-~~~~~~----------~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 240 EVIYYVR-DGNVLS----------CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred HHHHHHh-cCCCCC----------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 1222111 111100 001123467788999999999999999999999874
No 210
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=4.7e-36 Score=311.13 Aligned_cols=236 Identities=19% Similarity=0.248 Sum_probs=182.9
Q ss_pred cCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhc--cCCceeceeeEEeeCCceeEEEecCCC
Q 006884 342 LGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIG--KHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 342 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~--~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
||+|+||+||+|+.+ +++.||+|++..... ....+..|..++.... +||||+.+++.+...+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999965 589999999864321 1233445666666554 799999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC----
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF---- 490 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~---- 490 (627)
|+|..++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 g~L~~~l~~~-----~~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~ 152 (330)
T cd05586 81 GELFWHLQKE-----GRFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKANLTDNKT 152 (330)
T ss_pred ChHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCC
Confidence 9999998753 35899999999999999999999998 99999999999999999999999999875422
Q ss_pred CCCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 491 PTTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 491 ~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
.....||+.|+|||++.+. .++.++|||||||++|||++|+.||..... .+....+..... .+..
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~------~~~~~~i~~~~~-------~~~~- 218 (330)
T cd05586 153 TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT------QQMYRNIAFGKV-------RFPK- 218 (330)
T ss_pred ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH------HHHHHHHHcCCC-------CCCC-
Confidence 1234588999999998754 479999999999999999999999975321 111122111110 0000
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCC----CHHHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRP----KMDDVVR 602 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RP----s~~ev~~ 602 (627)
.. ....+.+++.+||+.+|.+|| +++++++
T Consensus 219 ~~---~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 219 NV---LSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred cc---CCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 01 123455788899999999998 5666655
No 211
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1e-34 Score=294.54 Aligned_cols=252 Identities=23% Similarity=0.334 Sum_probs=199.8
Q ss_pred HhcccCcCCceEEEEEEEc-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 338 SAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 338 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
..+.||+|+||+||++... +++.||+|++.... ...+.+.+|++++..+ +||||+++++++...+..++|+||+++
T Consensus 9 ~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 87 (284)
T cd06620 9 TISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHEC-RSPYIVSFYGAFLNENNICMCMEFMDC 87 (284)
T ss_pred HHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHc-CCCCcceEeeeEecCCEEEEEEecCCC
Confidence 3578999999999999965 58889999876442 2356789999999999 999999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS-EGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
++|.+++.+. ..+++.....++.+++.||.|||+ .+ ++||||||+||++++++.++|+|||++......
T Consensus 88 ~~L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~ 159 (284)
T cd06620 88 GSLDRIYKKG-----GPIPVEILGKIAVAVVEGLTYLYNVHR---IMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIA 159 (284)
T ss_pred CCHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHHhcC---eeccCCCHHHEEECCCCcEEEccCCcccchhhhcc
Confidence 9999998753 358999999999999999999997 45 999999999999999999999999998754322
Q ss_pred CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCC-----CCHHHHHHHHhhhcccccccchhh
Q 006884 492 TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDV-----VDLPRWVRSVVREEWTAEVFDVEL 566 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~d~~l 566 (627)
....++..|+|||++.+..++.++|||||||++||+++|+.||......+. ..+..+......+... .+
T Consensus 160 ~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 233 (284)
T cd06620 160 DTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPP------RL 233 (284)
T ss_pred CccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCC------CC
Confidence 234578899999999888899999999999999999999999985433211 1112222222211100 00
Q ss_pred hcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhc
Q 006884 567 LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQ 608 (627)
Q Consensus 567 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~ 608 (627)
...+....+.+++.+|+..+|++|||+.|++++..-++
T Consensus 234 ----~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~ 271 (284)
T cd06620 234 ----PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQ 271 (284)
T ss_pred ----CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 01123346778889999999999999999998755444
No 212
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=6.8e-35 Score=306.06 Aligned_cols=187 Identities=25% Similarity=0.366 Sum_probs=159.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCC------ceeEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD------EKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~------~~~lv 408 (627)
.+.||+|+||.||++... ++..||+|++.... .....+.+|+.++..+ +||||+++++++...+ ..++|
T Consensus 26 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~~lv 104 (359)
T cd07876 26 LKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCV-NHKNIISLLNVFTPQKSLEEFQDVYLV 104 (359)
T ss_pred EEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhC-CCCCEeeeeeeeccCCCccccceeEEE
Confidence 478999999999999965 58899999986432 2345678899999999 9999999999986543 46899
Q ss_pred EecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 409 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
|||+++ +|...+.. .+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++..
T Consensus 105 ~e~~~~-~l~~~~~~-------~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~ 173 (359)
T cd07876 105 MELMDA-NLCQVIHM-------ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 173 (359)
T ss_pred EeCCCc-CHHHHHhc-------cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEecCCCcccc
Confidence 999965 56666542 3788889999999999999999998 999999999999999999999999999765
Q ss_pred CCC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 006884 489 NFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHS 537 (627)
Q Consensus 489 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~ 537 (627)
... ....+|+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 174 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 174 CTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred ccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 332 2345788999999999999999999999999999999999999864
No 213
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=9.7e-35 Score=294.43 Aligned_cols=243 Identities=19% Similarity=0.305 Sum_probs=191.2
Q ss_pred HhcccCcCCceEEEEEEEc-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 338 SAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 338 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
..+.||+|+||.||++... ++..+++|.+.... ...+.+.+|++++..+ +|+|++++++++...+..++|+||++++
T Consensus 9 i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~ii~~~~~~~~~~~~~~v~e~~~~~ 87 (282)
T cd06643 9 IIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASC-DHPNIVKLLDAFYYENNLWILIEFCAGG 87 (282)
T ss_pred HHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHC-CCCCeeeEEEEEeeCCEEEEEEEecCCC
Confidence 3577999999999999976 47788888886432 2345688899999999 9999999999999999999999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~---- 491 (627)
+|..++... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 88 ~l~~~~~~~----~~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~ 160 (282)
T cd06643 88 AVDAVMLEL----ERPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRR 160 (282)
T ss_pred cHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEcccccccccccccccc
Confidence 999888643 236899999999999999999999998 999999999999999999999999998765322
Q ss_pred CCCCCCccccCccccC-----CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhh
Q 006884 492 TTATRTIGYRAPEVTE-----TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVEL 566 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 566 (627)
....++..|+|||++. +..++.++|||||||++|||++|+.||..... ............. . .
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~------~~~~~~~~~~~~~-~-----~ 228 (282)
T cd06643 161 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP------MRVLLKIAKSEPP-T-----L 228 (282)
T ss_pred ccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH------HHHHHHHhhcCCC-C-----C
Confidence 2345788999999974 44578899999999999999999999875321 1111111111100 0 0
Q ss_pred hcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 567 LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 567 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.... .....+.+++.+||+.+|.+||++.+++++
T Consensus 229 ~~~~---~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 229 AQPS---RWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred CCcc---ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0011 122356778889999999999999998764
No 214
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2.3e-35 Score=320.00 Aligned_cols=255 Identities=17% Similarity=0.263 Sum_probs=184.6
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhc-----cCCceeceeeEEeeC-CceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIG-----KHSNVVPVRAYYYSK-DEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~-----~h~niv~~~~~~~~~-~~~~lv~e~ 411 (627)
.+.||+|+||+||+|... .++.||||+++......+++..|++++..+. .|.+++.+++++... ...++|||+
T Consensus 134 ~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~ 213 (467)
T PTZ00284 134 LSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPK 213 (467)
T ss_pred EEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEec
Confidence 467999999999999965 5788999998754444455677777777762 344588888888764 467888888
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCCeEecCCC---------------
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE-GGAKFTHGNIKSSNVLLTQDL--------------- 475 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dlkp~NILl~~~~--------------- 475 (627)
+ +++|.+++.+. ..+++..+..++.|++.||.|||++ + |+||||||+|||++.++
T Consensus 214 ~-g~~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~yLH~~~g---IiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~ 284 (467)
T PTZ00284 214 Y-GPCLLDWIMKH-----GPFSHRHLAQIIFQTGVALDYFHTELH---LMHTDLKPENILMETSDTVVDPVTNRALPPDP 284 (467)
T ss_pred c-CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEecCCcccccccccccCCCC
Confidence 7 77898888754 3589999999999999999999984 7 99999999999998765
Q ss_pred -CeEEeecccccccCC-CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHH-------
Q 006884 476 -NGCISDVGLAHLINF-PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLP------- 546 (627)
Q Consensus 476 -~~ki~DfG~a~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~------- 546 (627)
.+||+|||.+..... .....+|+.|+|||++.+..++.++|||||||++|||++|+.||......+.....
T Consensus 285 ~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~ 364 (467)
T PTZ00284 285 CRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRL 364 (467)
T ss_pred ceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCC
Confidence 499999998865433 23456899999999999999999999999999999999999999764321111100
Q ss_pred --HHHHH--------Hhhh-cccccccchh-h---hcCCChH--HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 547 --RWVRS--------VVRE-EWTAEVFDVE-L---LKYQDVE--EEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 547 --~~~~~--------~~~~-~~~~~~~d~~-l---~~~~~~~--~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.|... .... .......++. + ....... .....+.+++.+||+.||++|||++|+++
T Consensus 365 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 365 PSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred CHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence 01000 0000 0000000000 0 0000000 11245778999999999999999999997
No 215
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=5.1e-35 Score=313.89 Aligned_cols=259 Identities=19% Similarity=0.320 Sum_probs=186.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeC--------CceeEEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSK--------DEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~--------~~~~lv~ 409 (627)
.+.||+|+||.||+|... +++.||||++... .....+|+.+++.+ +||||+++.+++... ...++||
T Consensus 71 ~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~---~~~~~~Ei~il~~l-~h~niv~l~~~~~~~~~~~~~~~~~l~lvm 146 (440)
T PTZ00036 71 GNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD---PQYKNRELLIMKNL-NHINIIFLKDYYYTECFKKNEKNIFLNVVM 146 (440)
T ss_pred eEEEEeCCCEEEEEEEECCCCCEEEEEEEecC---cchHHHHHHHHHhc-CCCCCcceeeeEeecccccCCCceEEEEEE
Confidence 478999999999999965 5889999988542 23345789999999 999999998887532 1356899
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC-CeEEeeccccccc
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL-NGCISDVGLAHLI 488 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~-~~ki~DfG~a~~~ 488 (627)
||+++ +|.+++..... ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++ .+||+|||+++..
T Consensus 147 E~~~~-~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL~DFGla~~~ 221 (440)
T PTZ00036 147 EFIPQ-TVHKYMKHYAR-NNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDFGSAKNL 221 (440)
T ss_pred ecCCc-cHHHHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceeeeccccchhc
Confidence 99975 77777654321 2346899999999999999999999998 99999999999999665 6999999999866
Q ss_pred CCC---CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccc------
Q 006884 489 NFP---TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWT------ 558 (627)
Q Consensus 489 ~~~---~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~------ 558 (627)
... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+ .+..... .......
T Consensus 222 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~--~~~~i~~-~~~~p~~~~~~~~ 298 (440)
T PTZ00036 222 LAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVD--QLVRIIQ-VLGTPTEDQLKEM 298 (440)
T ss_pred cCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHH-HhCCCCHHHHHHh
Confidence 432 23457889999999865 468999999999999999999999997643211 1111110 0000000
Q ss_pred -ccccchhhhc--CCCh-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHhhcc
Q 006884 559 -AEVFDVELLK--YQDV-----EEEMVQMLQIALSCVAKVPDSRPKMDDVVR--MIEQIQQ 609 (627)
Q Consensus 559 -~~~~d~~l~~--~~~~-----~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~--~L~~~~~ 609 (627)
....+..+.. .... .....++.+++.+||..+|.+|||+.|+++ .++.+..
T Consensus 299 ~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~ 359 (440)
T PTZ00036 299 NPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRD 359 (440)
T ss_pred chhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhc
Confidence 0000000000 0000 012245778889999999999999999996 4444443
No 216
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.5e-35 Score=304.69 Aligned_cols=182 Identities=22% Similarity=0.348 Sum_probs=157.0
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
.+.||+|+||.||+|+.. ++..||+|..... ....|+.++.++ +|+||+++++++......++|+||+. ++|
T Consensus 71 ~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l 143 (357)
T PHA03209 71 IKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNV-NHPSVIRMKDTLVSGAITCMVLPHYS-SDL 143 (357)
T ss_pred EEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhC-CCCCCcChhheEEeCCeeEEEEEccC-CcH
Confidence 478999999999999976 4678999975432 235688899999 99999999999999999999999994 688
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---CCC
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---TTA 494 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~---~~~ 494 (627)
.+++... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 144 ~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 216 (357)
T PHA03209 144 YTYLTKR----SRPLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGL 216 (357)
T ss_pred HHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCccccccccCcccccc
Confidence 8888653 246899999999999999999999998 999999999999999999999999999754322 234
Q ss_pred CCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 006884 495 TRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534 (627)
Q Consensus 495 ~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf 534 (627)
.||..|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 217 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 217 AGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred cccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 5789999999999999999999999999999999865544
No 217
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-35 Score=301.07 Aligned_cols=241 Identities=22% Similarity=0.355 Sum_probs=199.8
Q ss_pred cccCcCCceEEEEEEEcC-CcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 340 EVLGKGSYGSTYKAILED-GTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
+.||+|.||.||+++.+. |+.+|+|.+.+... ....+.+|+++|+++..||||+.+.+.|++.+..++|||++.|
T Consensus 41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~G 120 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEG 120 (382)
T ss_pred hhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCC
Confidence 679999999999999774 99999999976532 3468999999999996699999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC----CCeEEeecccccccCC
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD----LNGCISDVGLAHLINF 490 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~----~~~ki~DfG~a~~~~~ 490 (627)
|.|.+.+.+. .+++..+..++.|++.++.|||+.| |+||||||+|+|+... +.+|++|||++.....
T Consensus 121 GeLfd~i~~~------~~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~ 191 (382)
T KOG0032|consen 121 GELFDRIVKK------HYSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP 191 (382)
T ss_pred chHHHHHHHc------cCCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC
Confidence 9999999864 2899999999999999999999998 9999999999999643 4799999999998866
Q ss_pred C---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006884 491 P---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 491 ~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
. .+..||+.|+|||++....|+..+||||+||++|.|+.|.+||.+....... ..+..... +....
T Consensus 192 ~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~------~~i~~~~~-----~f~~~ 260 (382)
T KOG0032|consen 192 GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIF------LAILRGDF-----DFTSE 260 (382)
T ss_pred CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHH------HHHHcCCC-----CCCCC
Confidence 2 3456999999999999999999999999999999999999999876433211 12222211 11111
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.+... ....-+++..|+..||..|+|+.+++++
T Consensus 261 ~w~~i---s~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 261 PWDDI---SESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred Ccccc---CHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 22222 3344566779999999999999999985
No 218
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=5.2e-35 Score=308.37 Aligned_cols=252 Identities=22% Similarity=0.317 Sum_probs=189.5
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCC-----ceeEEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD-----EKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~-----~~~lv~ 409 (627)
.+.||+|+||.||++... +++.||+|++.... ...+.+.+|++++..+ +|+||+++++++...+ ..++|+
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 83 (372)
T cd07853 5 DRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFF-KHDNVLSALDILQPPHIDPFEEIYVVT 83 (372)
T ss_pred cceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhC-CCCCcCCHhheecCCCccccceEEEEe
Confidence 477999999999999964 68999999986532 2345788899999999 9999999999998766 789999
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||+. ++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 84 e~~~-~~l~~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 84 ELMQ-SDLHKIIVSP-----QPLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARVEE 154 (372)
T ss_pred eccc-cCHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccceeecc
Confidence 9996 5788877543 35899999999999999999999998 9999999999999999999999999997653
Q ss_pred CC-----CCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCH----------HHH-----
Q 006884 490 FP-----TTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL----------PRW----- 548 (627)
Q Consensus 490 ~~-----~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~----------~~~----- 548 (627)
.. ....+++.|+|||++.+. .++.++|||||||++|||++|+.||......+.... ..+
T Consensus 155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 234 (372)
T cd07853 155 PDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACE 234 (372)
T ss_pred cCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhH
Confidence 22 123467889999998764 478999999999999999999999976532211000 000
Q ss_pred -HHHHhhhc-ccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 549 -VRSVVREE-WTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 549 -~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
....+... ...... ... .....+...++.+++.+|++.||++|||+.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 235 GARAHILRGPHKPPSL-PVL--YTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHHHHhCCCCCCch-HHh--cccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 00000000 000000 000 00001113456788999999999999999999874
No 219
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=2.3e-34 Score=296.84 Aligned_cols=193 Identities=23% Similarity=0.425 Sum_probs=158.2
Q ss_pred cccCcCCceEEEEEEEc---CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEee--CCceeEEEecCCC
Q 006884 340 EVLGKGSYGSTYKAILE---DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS--KDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~--~~~~~lv~e~~~~ 414 (627)
..||+|+||.||+|+.+ ++..||+|.+.... ....+.+|++++..+ +||||+++++++.. +...++|+||+.+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-ISMSACREIALLREL-KHPNVIALQKVFLSHSDRKVWLLFDYAEH 84 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC-CcHHHHHHHHHHHhC-CCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence 57999999999999965 35689999886532 345678899999999 99999999998854 4567899999864
Q ss_pred CcHHHHhhhcCC----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe----cCCCCeEEeeccccc
Q 006884 415 GSLFMLLHRNRS----DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL----TQDLNGCISDVGLAH 486 (627)
Q Consensus 415 gsL~~~l~~~~~----~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl----~~~~~~ki~DfG~a~ 486 (627)
+|.+++..... .....+++..+..++.|++.||.|||+.+ |+||||||+||++ +.++.+||+|||+++
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 85 -DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred -cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 78777753321 11235889999999999999999999998 9999999999999 566899999999998
Q ss_pred ccCCC-------CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 006884 487 LINFP-------TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSG 538 (627)
Q Consensus 487 ~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~ 538 (627)
..... ....+|+.|+|||++.+ ..++.++|||||||++|||+||+.||....
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~ 220 (317)
T cd07867 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred ccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccccc
Confidence 76432 12346888999999876 457999999999999999999999997543
No 220
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=8.7e-35 Score=295.32 Aligned_cols=247 Identities=23% Similarity=0.358 Sum_probs=191.6
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEe-----eCCceeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYY-----SKDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~-----~~~~~~lv~e~~ 412 (627)
.+.||+|+||.||++... +++.+|+|++........++.+|+.++..+.+|+||+++++++. .++..++||||+
T Consensus 23 ~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~ 102 (286)
T cd06638 23 IETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELC 102 (286)
T ss_pred eeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeec
Confidence 467999999999999865 57899999886544445678889999999977999999999885 335679999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC-
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP- 491 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~- 491 (627)
++++|.+++..... ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 103 ~~~~L~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~ 178 (286)
T cd06638 103 NGGSVTDLVKGFLK-RGERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR 178 (286)
T ss_pred CCCCHHHHHHHhhc-cCccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCCCCEEEccCCceeecccCC
Confidence 99999998864321 1346889999999999999999999988 999999999999999999999999998765432
Q ss_pred ---CCCCCCccccCccccCC-----CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006884 492 ---TTATRTIGYRAPEVTET-----RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 492 ---~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
....+++.|+|||++.. ..++.++|||||||++|||++|+.||....... . ..... ........+
T Consensus 179 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~-----~-~~~~~-~~~~~~~~~ 251 (286)
T cd06638 179 LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR-----A-LFKIP-RNPPPTLHQ 251 (286)
T ss_pred CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH-----H-Hhhcc-ccCCCcccC
Confidence 23457889999998753 457889999999999999999999997542211 0 00000 000000000
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006884 564 VELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMI 604 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L 604 (627)
.......+.+++.+||+.+|++|||+.|++++.
T Consensus 252 --------~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 252 --------PELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred --------CCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 011123577888999999999999999998754
No 221
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=4.8e-35 Score=297.52 Aligned_cols=255 Identities=22% Similarity=0.314 Sum_probs=187.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhc--cCCceeceeeEEeeC-----CceeE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIG--KHSNVVPVRAYYYSK-----DEKLV 407 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~--~h~niv~~~~~~~~~-----~~~~l 407 (627)
.+.||+|+||.||+|+.+ +++.||+|.++... .....+.+|++++..+. +||||+++++++... ...++
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~l 84 (288)
T cd07863 5 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTL 84 (288)
T ss_pred eeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEE
Confidence 367999999999999966 68899999886432 12345667777777664 699999999988642 34789
Q ss_pred EEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccc
Q 006884 408 VYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHL 487 (627)
Q Consensus 408 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~ 487 (627)
++||+++ +|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 85 v~e~~~~-~l~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~dfg~~~~ 157 (288)
T cd07863 85 VFEHVDQ-DLRTYLDKVP---PPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGLARI 157 (288)
T ss_pred EEccccc-CHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccCcccc
Confidence 9999974 8988887542 235899999999999999999999998 99999999999999999999999999987
Q ss_pred cCCC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHh---hhccccc-
Q 006884 488 INFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVV---REEWTAE- 560 (627)
Q Consensus 488 ~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~~- 560 (627)
.... ....++..|+|||++.+..++.++|||||||++|||++|++||......+ .+........ ...+...
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07863 158 YSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD--QLGKIFDLIGLPPEDDWPRDV 235 (288)
T ss_pred ccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH--HHHHHHHHhCCCChhhCcccc
Confidence 6432 23356889999999998899999999999999999999999997543211 1111111000 0000000
Q ss_pred -----ccchhhhc--CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 561 -----VFDVELLK--YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 561 -----~~d~~l~~--~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.+.+.... ....++....+.+++.+|++.||++|||+.|++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 236 TLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred cccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00000000 0000112345678889999999999999999975
No 222
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.5e-34 Score=299.41 Aligned_cols=192 Identities=25% Similarity=0.386 Sum_probs=161.6
Q ss_pred hcccCcC--CceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecC
Q 006884 339 AEVLGKG--SYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 412 (627)
.++||+| +|++||++..+ +|+.||+|++..... ..+.+.+|+++++.+ +||||+++++++..++..++|+||+
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLF-NHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEEECCEEEEEEecc
Confidence 3679999 67899999865 689999999875422 234577788999988 9999999999999999999999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC--
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF-- 490 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~-- 490 (627)
++|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++++||+.......
T Consensus 82 ~~~~l~~~~~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~ 155 (327)
T cd08227 82 AYGSAKDLICTHF---MDGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMINHG 155 (327)
T ss_pred CCCcHHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccchhhcccccc
Confidence 9999999997542 234899999999999999999999998 99999999999999999999999986543211
Q ss_pred ---------CCCCCCCccccCccccCC--CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 006884 491 ---------PTTATRTIGYRAPEVTET--RKASQKSDVYSFGVLLLEMLTGKAPLQHS 537 (627)
Q Consensus 491 ---------~~~~~~t~~y~aPE~~~~--~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~ 537 (627)
.....++..|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 213 (327)
T cd08227 156 QRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 213 (327)
T ss_pred ccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence 112235667999999875 46899999999999999999999999753
No 223
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-35 Score=306.29 Aligned_cols=244 Identities=23% Similarity=0.365 Sum_probs=200.7
Q ss_pred HHhcccCcCCceEEEEEEEc--CCc--EEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 337 ASAEVLGKGSYGSTYKAILE--DGT--TVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 337 ~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
...|+||+|.||.|++|.|. +|+ .||||.++.... ...+|.+|+.+|.++ +|+|+++++|...+ ....+|+|
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L-~H~hliRLyGvVl~-qp~mMV~E 190 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKL-QHPHLIRLYGVVLD-QPAMMVFE 190 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhc-cCcceeEEeeeecc-chhhHHhh
Confidence 44688999999999999976 343 589999986643 568899999999999 99999999999876 67789999
Q ss_pred cCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC
Q 006884 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF 490 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 490 (627)
.++.|+|.+.|++.. ...+-......++.|||.|+.||.+++ +|||||.++|+|+.....+||+|||+.+.+..
T Consensus 191 LaplGSLldrLrka~---~~~llv~~Lcdya~QiA~aM~YLeskr---lvHRDLAARNlllasprtVKI~DFGLmRaLg~ 264 (1039)
T KOG0199|consen 191 LAPLGSLLDRLRKAK---KAILLVSRLCDYAMQIAKAMQYLESKR---LVHRDLAARNLLLASPRTVKICDFGLMRALGE 264 (1039)
T ss_pred hcccchHHHHHhhcc---ccceeHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhhhhheecccceeeeecccceeccCC
Confidence 999999999998732 356778888999999999999999998 99999999999999999999999999998754
Q ss_pred CCCC-------CCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006884 491 PTTA-------TRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 491 ~~~~-------~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
.... .....|.|||.+...+++.++|||+|||++|||+| |+.||-+.....+ +. .+
T Consensus 265 ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qI----------L~------~i 328 (1039)
T KOG0199|consen 265 NEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQI----------LK------NI 328 (1039)
T ss_pred CCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHH----------HH------hc
Confidence 3221 12457999999999999999999999999999999 7889876432211 11 11
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 006884 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~ 605 (627)
| .-........+.+++.+++..||..+|++|||+..|.+.+-
T Consensus 329 D-~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~ 370 (1039)
T KOG0199|consen 329 D-AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLV 370 (1039)
T ss_pred c-ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHH
Confidence 1 11122334567778999999999999999999999985433
No 224
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=4.6e-35 Score=307.90 Aligned_cols=242 Identities=20% Similarity=0.280 Sum_probs=187.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+++.+ +++.||+|++.... ...+.+.+|+.++..+ +||||+++++.+......++||||++
T Consensus 48 ~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~-~hp~iv~~~~~~~~~~~~~lv~Ey~~ 126 (371)
T cd05622 48 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDDRYLYMVMEYMP 126 (371)
T ss_pred EEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCCEEEEEEcCCC
Confidence 478999999999999976 57899999986432 2234577888888888 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|.+++... .++...+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 127 gg~L~~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~ 197 (371)
T cd05622 127 GGDLVNLMSNY------DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 197 (371)
T ss_pred CCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCc
Confidence 99999998643 3788888999999999999999998 999999999999999999999999999766432
Q ss_pred ---CCCCCCccccCccccCCC----CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006884 492 ---TTATRTIGYRAPEVTETR----KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 492 ---~~~~~t~~y~aPE~~~~~----~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
....||+.|+|||++... .++.++|||||||++|||++|+.||...+. ......+........
T Consensus 198 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~------~~~~~~i~~~~~~~~---- 267 (371)
T cd05622 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL------VGTYSKIMNHKNSLT---- 267 (371)
T ss_pred ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH------HHHHHHHHcCCCccc----
Confidence 234589999999998653 378999999999999999999999975421 122222221111100
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHHH
Q 006884 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDS--RPKMDDVVRMI 604 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~--RPs~~ev~~~L 604 (627)
..... .....+.+++.+|+...+.+ ||+++|++++.
T Consensus 268 -~~~~~---~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 268 -FPDDN---DISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred -CCCcC---CCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 01111 12234556777898744433 78999998864
No 225
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=3.7e-34 Score=289.70 Aligned_cols=246 Identities=22% Similarity=0.402 Sum_probs=196.4
Q ss_pred hcccCcCCceEEEEEEEcC-Cc----EEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILED-GT----TVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~-~~----~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||.||+|..++ +. .+|+|.+..... ...++.+|++++.++ +|+|++++++++.. ...++|+||
T Consensus 12 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~~~~~v~e~ 89 (279)
T cd05057 12 IKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASV-DHPHVVRLLGICLS-SQVQLITQL 89 (279)
T ss_pred cceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEec-CceEEEEec
Confidence 4789999999999998653 33 589998765532 346788999999999 99999999999887 788999999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 491 (627)
+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||.++.....
T Consensus 90 ~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~ 162 (279)
T cd05057 90 MPLGCLLDYVRNHK----DNIGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVD 162 (279)
T ss_pred CCCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEcCCCeEEECCCcccccccCc
Confidence 99999999997643 34899999999999999999999988 999999999999999999999999999876432
Q ss_pred CC------CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006884 492 TT------ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 492 ~~------~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
.. ...+..|+|||.+....++.++||||||+++||+++ |+.||...... +. ...+......
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~------~~-~~~~~~~~~~----- 230 (279)
T cd05057 163 EKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV------EI-PDLLEKGERL----- 230 (279)
T ss_pred ccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH------HH-HHHHhCCCCC-----
Confidence 21 112457999999988889999999999999999998 99999754211 11 1111111100
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
.....+...+.+++.+||..+|.+||++.++++.|+++...
T Consensus 231 -----~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 231 -----PQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred -----CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 00011223567888999999999999999999999998654
No 226
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=5.2e-35 Score=294.41 Aligned_cols=247 Identities=23% Similarity=0.390 Sum_probs=195.7
Q ss_pred hcccCcCCceEEEEEEEcC----CcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAILED----GTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 412 (627)
.+.||+|+||.||+|...+ ...|+||...... ...+.+.+|+++++.+ +||||+++++++.. +..++||||+
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~-~~~~lv~e~~ 88 (270)
T cd05056 11 GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQF-DHPHIVKLIGVITE-NPVWIVMELA 88 (270)
T ss_pred eeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhC-CCCchhceeEEEcC-CCcEEEEEcC
Confidence 4789999999999998643 2468999876543 2345789999999999 89999999998865 5678999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT 492 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~ 492 (627)
++|+|.+++.... ..+++..+..++.+++.||.|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 89 ~~~~L~~~l~~~~----~~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 161 (270)
T cd05056 89 PLGELRSYLQVNK----YSLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDES 161 (270)
T ss_pred CCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeeeccccc
Confidence 9999999997542 35899999999999999999999988 9999999999999999999999999987654322
Q ss_pred C-----CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhh
Q 006884 493 T-----ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVEL 566 (627)
Q Consensus 493 ~-----~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 566 (627)
. ..++..|+|||.+....++.++||||||+++||+++ |+.||......+ ...........
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~------~~~~~~~~~~~-------- 227 (270)
T cd05056 162 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND------VIGRIENGERL-------- 227 (270)
T ss_pred ceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH------HHHHHHcCCcC--------
Confidence 1 123457999999988889999999999999999986 999997543221 11111111100
Q ss_pred hcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 567 LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 567 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
.........+.+++.+|+..+|++|||+.++++.|+++...+
T Consensus 228 ---~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~~ 269 (270)
T cd05056 228 ---PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQEE 269 (270)
T ss_pred ---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 001122346777888999999999999999999999987653
No 227
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.9e-34 Score=287.68 Aligned_cols=241 Identities=23% Similarity=0.358 Sum_probs=194.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||++... +++.+|+|.++... ...+.+..|++++..+ +|+|++++.+.+..++..++++||+++|
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 83 (255)
T cd08219 5 LRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKM-KHPNIVAFKESFEADGHLYIVMEYCDGG 83 (255)
T ss_pred EEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEECCEEEEEEeeCCCC
Confidence 478999999999999965 68899999886432 2346788899999999 9999999999999999999999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~---- 491 (627)
+|.+++.... +..+++.....++.|++.||.|||+.+ |+|+||||+||++++++.++++|||.++.....
T Consensus 84 ~l~~~~~~~~---~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~ 157 (255)
T cd08219 84 DLMQKIKLQR---GKLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYA 157 (255)
T ss_pred cHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCcceeeccccccc
Confidence 9999887532 345788999999999999999999998 999999999999999999999999998766432
Q ss_pred CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006884 492 TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
....++..|+|||++.+..++.++||||||+++|+|++|+.||..... ........... ... +
T Consensus 158 ~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~------~~~~~~~~~~~-~~~-~--------- 220 (255)
T cd08219 158 CTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW------KNLILKVCQGS-YKP-L--------- 220 (255)
T ss_pred ccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH------HHHHHHHhcCC-CCC-C---------
Confidence 234577889999999988899999999999999999999999975321 11111111111 100 0
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.......+.+++.+||+.+|++||++.+++..
T Consensus 221 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 221 PSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 01122356788899999999999999999764
No 228
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.2e-34 Score=296.04 Aligned_cols=239 Identities=24% Similarity=0.354 Sum_probs=192.9
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
.+.||+|+||.||++... +++.||+|.+.... ...+.+.+|+.+++.+ +|+|++++++++...+..++||||+++++
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 102 (297)
T cd06656 24 FEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMREN-KNPNIVNYLDSYLVGDELWVVMEYLAGGS 102 (297)
T ss_pred eeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCEEEEeecccCCCC
Confidence 467999999999999964 78999999986543 3346678899999988 99999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC----
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT---- 492 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~---- 492 (627)
|.+++.+. .+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 103 L~~~~~~~------~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~ 173 (297)
T cd06656 103 LTDVVTET------CMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 173 (297)
T ss_pred HHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccceEccCCccCcC
Confidence 99998643 4788999999999999999999998 9999999999999999999999999987654321
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
...+++.|+|||...+..++.++||||||+++|++++|+.||.......... ...... .+ .....
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~------~~~~~~------~~---~~~~~ 238 (297)
T cd06656 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY------LIATNG------TP---ELQNP 238 (297)
T ss_pred cccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee------eeccCC------CC---CCCCc
Confidence 2346788999999998889999999999999999999999997543211100 000000 00 00011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
......+.+++.+||..+|++||+++++++
T Consensus 239 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 239 ERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 122234667888999999999999999988
No 229
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=4e-35 Score=300.46 Aligned_cols=248 Identities=23% Similarity=0.410 Sum_probs=194.6
Q ss_pred hcccCcCCceEEEEEEEc-CCc----EEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILE-DGT----TVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||.||+|.+. ++. .||+|.+..... ...++.+|+.++..+ +||||+++++++... ..++++||
T Consensus 12 ~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l-~h~niv~~~~~~~~~-~~~~v~e~ 89 (303)
T cd05110 12 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM-DHPHLVRLLGVCLSP-TIQLVTQL 89 (303)
T ss_pred ccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCcccEEEEEcCC-Cceeeehh
Confidence 468999999999999864 343 478888765432 234688899999999 999999999998754 46789999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 491 (627)
+++|+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 90 ~~~g~l~~~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~ 162 (303)
T cd05110 90 MPHGCLLDYVHEHK----DNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 162 (303)
T ss_pred cCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeecCCCceEEccccccccccCc
Confidence 99999999987542 35889999999999999999999998 999999999999999999999999999865432
Q ss_pred C------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006884 492 T------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 492 ~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
. ...++..|+|||++.+..++.++||||||+++||+++ |+.||...... .. ..........
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~---~~----~~~~~~~~~~----- 230 (303)
T cd05110 163 EKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR---EI----PDLLEKGERL----- 230 (303)
T ss_pred ccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH---HH----HHHHHCCCCC-----
Confidence 1 1223568999999998899999999999999999997 88998653211 11 1111111100
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006884 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~ 612 (627)
.....+...+.+++.+||..+|++||++.++++.|+++.....
T Consensus 231 -----~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~~ 273 (303)
T cd05110 231 -----PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQ 273 (303)
T ss_pred -----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhchh
Confidence 0011123467788999999999999999999999999865544
No 230
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-37 Score=283.49 Aligned_cols=260 Identities=23% Similarity=0.345 Sum_probs=200.6
Q ss_pred CCCCHHHHHHHHhcccCcCCceEEEEEEEc-CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCC
Q 006884 327 FNFDLEDLLRASAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD 403 (627)
Q Consensus 327 ~~~~~~~l~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~ 403 (627)
+.|+-++++. ...||.|+||+|+|-.++ .|+..|||+++.... ..+++..|.+...+-.+.||||+++|.+..++
T Consensus 59 ~~F~~~~Lqd--lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EG 136 (361)
T KOG1006|consen 59 HTFTSDNLQD--LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEG 136 (361)
T ss_pred cccccchHHH--HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCC
Confidence 3444444433 267999999999999865 799999999987643 45678888888777779999999999999999
Q ss_pred ceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecc
Q 006884 404 EKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVG 483 (627)
Q Consensus 404 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG 483 (627)
..++.||.|+- ++..+.+....-....+++...-+|+...+.||.||.+.- +|||||+||+|||++..|.+|+||||
T Consensus 137 dcWiCMELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFG 213 (361)
T KOG1006|consen 137 DCWICMELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFG 213 (361)
T ss_pred ceeeeHHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeeccc
Confidence 99999999954 7766554433223457888888899999999999998764 69999999999999999999999999
Q ss_pred cccccCCC---CCCCCCccccCccccC--CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006884 484 LAHLINFP---TTATRTIGYRAPEVTE--TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 484 ~a~~~~~~---~~~~~t~~y~aPE~~~--~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
++..+..+ +...|-..|||||.+. +..|+.++||||+|++|||+.||+.||..-+ ++-+.+.+++.....
T Consensus 214 IcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~-----svfeql~~Vv~gdpp 288 (361)
T KOG1006|consen 214 ICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD-----SVFEQLCQVVIGDPP 288 (361)
T ss_pred chHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH-----HHHHHHHHHHcCCCC
Confidence 99887554 2345667799999985 3458999999999999999999999997432 233334444433322
Q ss_pred ccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 559 AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 559 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.-..+ ...-+....+.+++.-|+.+|-.+||...++.+
T Consensus 289 ~l~~~------~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 289 ILLFD------KECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred eecCc------ccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 11111 222234456778888999999999999999876
No 231
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=6.2e-35 Score=306.38 Aligned_cols=190 Identities=25% Similarity=0.371 Sum_probs=167.1
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||++..+ +++.||+|++.... .....+.+|++++..+ +|++|+++++.+.+.+..++||||++
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~~~~~~~~~~~~~lv~E~~~ 84 (360)
T cd05627 6 LKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEA-DGAWVVKMFYSFQDKRNLYLIMEFLP 84 (360)
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEEEeCCC
Confidence 368999999999999965 58899999987532 2345678899999999 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|.+++.+. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 85 gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~ 156 (360)
T cd05627 85 GGDMMTLLMKK-----DTLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHR 156 (360)
T ss_pred CccHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCcccccccc
Confidence 99999999754 35889999999999999999999998 999999999999999999999999998654211
Q ss_pred -------------------------------------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 006884 492 -------------------------------------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPL 534 (627)
Q Consensus 492 -------------------------------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf 534 (627)
....||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf 236 (360)
T cd05627 157 TEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (360)
T ss_pred cccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCC
Confidence 1235789999999999999999999999999999999999999
Q ss_pred CCC
Q 006884 535 QHS 537 (627)
Q Consensus 535 ~~~ 537 (627)
...
T Consensus 237 ~~~ 239 (360)
T cd05627 237 CSE 239 (360)
T ss_pred CCC
Confidence 754
No 232
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.2e-34 Score=295.76 Aligned_cols=239 Identities=25% Similarity=0.375 Sum_probs=193.3
Q ss_pred hcccCcCCceEEEEEEE-cCCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
.+.||.|++|.||+|.. .+++.|++|.+.... ...+.+.+|+++++.+ +|+|++++++++...+..++|+||+++++
T Consensus 24 ~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 102 (296)
T cd06655 24 YEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKEL-KNPNIVNFLDSFLVGDELFVVMEYLAGGS 102 (296)
T ss_pred EEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhc-CCCceeeeeeeEecCceEEEEEEecCCCc
Confidence 36799999999999985 468999999886543 3456788899999999 99999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC----
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT---- 492 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~---- 492 (627)
|..++... .+++..+..++.|++.|+.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 103 L~~~~~~~------~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 173 (296)
T cd06655 103 LTDVVTET------CMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRS 173 (296)
T ss_pred HHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccchhcccccccCC
Confidence 99988642 4899999999999999999999998 9999999999999999999999999987654321
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
...++..|+|||.+.+..++.++|||||||++|+|++|+.||...... .......... ... + ...
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~------~~~~~~~~~~-~~~-----~---~~~ 238 (296)
T cd06655 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL------RALYLIATNG-TPE-----L---QNP 238 (296)
T ss_pred CcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhcC-Ccc-----c---CCc
Confidence 234678899999999888999999999999999999999999754321 1111111100 000 0 011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
......+.+++.+||..+|++||++.++++
T Consensus 239 ~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 239 EKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred ccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 122235667888999999999999999986
No 233
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.2e-34 Score=307.38 Aligned_cols=251 Identities=18% Similarity=0.276 Sum_probs=189.2
Q ss_pred hcccCcCCceEEEEEEEc---CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE---DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||++... .+..||+|.+... +...+|++++..+ +||||+++++++......+++||++. +
T Consensus 97 ~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 170 (392)
T PHA03207 97 LSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----KTPGREIDILKTI-SHRAIINLIHAYRWKSTVCMVMPKYK-C 170 (392)
T ss_pred EEeecCCCCeEEEEEEEcCCccceeEEEEecccc----ccHHHHHHHHHhc-CCCCccceeeeEeeCCEEEEEehhcC-C
Confidence 477999999999999754 3567999987542 3456899999999 99999999999999999999999985 6
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC---
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT--- 492 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~--- 492 (627)
+|.+++... ..+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.++|+|||+++......
T Consensus 171 ~l~~~l~~~-----~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~ 242 (392)
T PHA03207 171 DLFTYVDRS-----GPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTP 242 (392)
T ss_pred CHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccccccCcccccc
Confidence 888888432 46899999999999999999999998 9999999999999999999999999997654321
Q ss_pred ---CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccc--c-----c-
Q 006884 493 ---TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTA--E-----V- 561 (627)
Q Consensus 493 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~- 561 (627)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.+............+...+...... . .
T Consensus 243 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~ 322 (392)
T PHA03207 243 QCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLC 322 (392)
T ss_pred cccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHH
Confidence 2357899999999999999999999999999999999999997654322111000000000000000 0 0
Q ss_pred -----cchhhhcCCChH------HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 562 -----FDVELLKYQDVE------EEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 562 -----~d~~l~~~~~~~------~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
+..........+ ....++.+++.+|+..+|++|||+.|++.+
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 323 KHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred HHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000000000 012356678889999999999999999875
No 234
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-35 Score=278.98 Aligned_cols=258 Identities=20% Similarity=0.361 Sum_probs=201.4
Q ss_pred CHHHHHHHHhcccCcCCceEEEEEE-EcCCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeE
Q 006884 330 DLEDLLRASAEVLGKGSYGSTYKAI-LEDGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLV 407 (627)
Q Consensus 330 ~~~~l~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~l 407 (627)
.++|+.+-+.+.||+|+|+.|-.+. +.+|..+|||++.+.. .....+.+|++++..-+.|+||+.++.+|++++..|+
T Consensus 74 ~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYL 153 (463)
T KOG0607|consen 74 KFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYL 153 (463)
T ss_pred hHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEE
Confidence 5788888899999999999999888 6689999999997653 3467788999999999999999999999999999999
Q ss_pred EEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC---eEEeeccc
Q 006884 408 VYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN---GCISDVGL 484 (627)
Q Consensus 408 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~---~ki~DfG~ 484 (627)
|||-|.||.|..++++.+ .+++.++.++..+|+.||.+||.+| |.|||+||+|||-.+... +|||||.+
T Consensus 154 VfEKm~GGplLshI~~~~-----~F~E~EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn~vsPvKiCDfDL 225 (463)
T KOG0607|consen 154 VFEKMRGGPLLSHIQKRK-----HFNEREASRVVKDIASALDFLHTKG---IAHRDLKPENILCESPNKVSPVKICDFDL 225 (463)
T ss_pred EEecccCchHHHHHHHhh-----hccHHHHHHHHHHHHHHHHHHhhcC---cccccCCccceeecCCCCcCceeeecccc
Confidence 999999999999998764 5899999999999999999999999 999999999999976544 69999998
Q ss_pred ccccCCC-----------CCCCCCccccCccccC-----CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCC----C
Q 006884 485 AHLINFP-----------TTATRTIGYRAPEVTE-----TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV----D 544 (627)
Q Consensus 485 a~~~~~~-----------~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~----~ 544 (627)
+...... .+.+|+..|||||+.. ...|+.++|.||+|||+|-|+.|.+||.+....+.. .
T Consensus 226 gSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe 305 (463)
T KOG0607|consen 226 GSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGE 305 (463)
T ss_pred ccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCC
Confidence 7543211 2345777899999863 346899999999999999999999999876543321 1
Q ss_pred HHHHH----HHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 545 LPRWV----RSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 545 ~~~~~----~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
..+-. -.-++++... ..|. .+....++.+ +++...+..++.+|-++.+++.
T Consensus 306 ~Cr~CQ~~LFesIQEGkYe-FPdk---dWahIS~eak---dlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 306 VCRVCQNKLFESIQEGKYE-FPDK---DWAHISSEAK---DLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred ccHHHHHHHHHHHhccCCc-CChh---hhHHhhHHHH---HHHHHHHhccHHhhhhhhhccC
Confidence 11111 1112222211 1111 1222333444 4555666799999999999887
No 235
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.8e-34 Score=293.83 Aligned_cols=246 Identities=24% Similarity=0.373 Sum_probs=192.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeC-----CceeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSK-----DEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~-----~~~~lv~e~~ 412 (627)
.+.||+|+||.||++... +++.+|+|++.........+.+|+.++.++.+|||++++++++... +..++|+||+
T Consensus 27 ~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~ 106 (291)
T cd06639 27 IETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELC 106 (291)
T ss_pred EEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEEC
Confidence 367999999999999964 6889999998765445677888999999987899999999998754 3578999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC-
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP- 491 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~- 491 (627)
++|+|.++++.... ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 107 ~~~sL~~~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~ 182 (291)
T cd06639 107 NGGSVTELVKGLLI-CGQRLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR 182 (291)
T ss_pred CCCcHHHHHHHhhh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEeecccchhccccc
Confidence 99999998874321 2346899999999999999999999988 999999999999999999999999998765432
Q ss_pred ---CCCCCCccccCccccCCC-----CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006884 492 ---TTATRTIGYRAPEVTETR-----KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 492 ---~~~~~t~~y~aPE~~~~~-----~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
....++..|+|||++... .++.++|||||||++|||++|+.||...... ..+..+.... ....
T Consensus 183 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~------~~~~~~~~~~-~~~~-- 253 (291)
T cd06639 183 LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV------KTLFKIPRNP-PPTL-- 253 (291)
T ss_pred ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH------HHHHHHhcCC-CCCC--
Confidence 234567889999997543 3689999999999999999999999753211 1111111110 1011
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 564 VELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
...++....+.+++.+||+.+|++||++.|++++
T Consensus 254 ------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 254 ------LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred ------CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 1112233457788999999999999999999764
No 236
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=8.2e-35 Score=305.03 Aligned_cols=253 Identities=22% Similarity=0.276 Sum_probs=187.9
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCC------ceeEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD------EKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~------~~~lv 408 (627)
.+.||+|+||.||++... .++.||||++..... ..+.+.+|+.+++.+ +||||+++++++.... ..++|
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~~lv 100 (355)
T cd07874 22 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKSLEEFQDVYLV 100 (355)
T ss_pred EEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHh-CCCchhceeeeeeccccccccceeEEE
Confidence 468999999999999865 588999999875422 235677899999999 9999999999886432 46899
Q ss_pred EecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 409 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
|||+++ ++.+++.. .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 101 ~e~~~~-~l~~~~~~-------~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~~kl~Dfg~~~~~ 169 (355)
T cd07874 101 MELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 169 (355)
T ss_pred hhhhcc-cHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCCEEEeeCcccccC
Confidence 999965 67666643 3788899999999999999999998 999999999999999999999999999876
Q ss_pred CCC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCC---------HHHH-------H
Q 006884 489 NFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVD---------LPRW-------V 549 (627)
Q Consensus 489 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~---------~~~~-------~ 549 (627)
... ....+|..|+|||++.+..++.++|||||||++|||++|+.||.+....+... .+++ +
T Consensus 170 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (355)
T cd07874 170 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 249 (355)
T ss_pred CCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHH
Confidence 443 23457889999999999899999999999999999999999997543111000 0000 0
Q ss_pred HHHhhhcc-cccccchhh------hcC-CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 550 RSVVREEW-TAEVFDVEL------LKY-QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 550 ~~~~~~~~-~~~~~d~~l------~~~-~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
........ ......+.. ... .........+.+++.+|++.||++|||+.|++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 250 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 00000000 000000000 000 0001123456789999999999999999999985
No 237
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=6.8e-35 Score=298.48 Aligned_cols=252 Identities=19% Similarity=0.325 Sum_probs=189.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|+.+ +++.||+|.+.... .....+.+|++++..+ +|+||+++++++...+..++|+||++ +
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~~~~lv~e~~~-~ 88 (301)
T cd07873 11 LDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL-KHANIVTLHDIIHTEKSLTLVFEYLD-K 88 (301)
T ss_pred eeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhc-CCCCcceEEEEEecCCeEEEEEeccc-c
Confidence 367999999999999965 57899999986432 2345678899999999 99999999999999999999999997 5
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC---
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT--- 492 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~--- 492 (627)
+|.+++... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 89 ~l~~~l~~~----~~~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 161 (301)
T cd07873 89 DLKQYLDDC----GNSINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY 161 (301)
T ss_pred CHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcc
Confidence 898888754 235789999999999999999999998 9999999999999999999999999987653321
Q ss_pred -CCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhh---hcccccccc----
Q 006884 493 -TATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVR---EEWTAEVFD---- 563 (627)
Q Consensus 493 -~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d---- 563 (627)
...+++.|+|||++.+ ..++.++||||||+++|||++|+.||...+..+ ....+..... ........+
T Consensus 162 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (301)
T cd07873 162 SNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE---QLHFIFRILGTPTEETWPGILSNEEF 238 (301)
T ss_pred cccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHcCCCChhhchhhhccccc
Confidence 2345788999999865 457889999999999999999999997543211 0000000000 000000000
Q ss_pred --hhhhcCC--C----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 564 --VELLKYQ--D----VEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 564 --~~l~~~~--~----~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
....... . .......+.+++.+|++.+|.+|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 239 KSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred cccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0000000 0 0011234567889999999999999999987
No 238
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.6e-34 Score=290.38 Aligned_cols=243 Identities=21% Similarity=0.327 Sum_probs=190.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc-CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA-TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
.+.||+|+||.||+|+.. +++.||+|.++.... ....+.+|+.++..+ +||||+++++.+...+..++|+||+++++
T Consensus 14 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l-~h~~ii~~~~~~~~~~~~~lv~e~~~~~~ 92 (267)
T cd06645 14 IQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDC-KHSNIVAYFGSYLRRDKLWICMEFCGGGS 92 (267)
T ss_pred HHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCCEEEEEEeccCCCc
Confidence 577999999999999864 688999998865432 334577899999999 99999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----C
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----T 492 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~----~ 492 (627)
|.+++... ..+++.....++.|++.|+.|||+.+ ++|+||||+||+++.++.++|+|||++...... .
T Consensus 93 L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (267)
T cd06645 93 LQDIYHVT-----GPLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRK 164 (267)
T ss_pred HHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceeeeEccCcccccc
Confidence 99998754 35899999999999999999999998 999999999999999999999999998755322 2
Q ss_pred CCCCCccccCccccC---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 493 TATRTIGYRAPEVTE---TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
...++..|+|||++. ...++.++|||||||++|||++|+.||........ ............ .....
T Consensus 165 ~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~------~~~~~~~~~~~~----~~~~~ 234 (267)
T cd06645 165 SFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA------LFLMTKSNFQPP----KLKDK 234 (267)
T ss_pred cccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh------HHhhhccCCCCC----ccccc
Confidence 345788999999874 45588999999999999999999999864332110 001111110000 00000
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.. ....+.+++.+|+..+|++||++++++++
T Consensus 235 ~~---~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 235 MK---WSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred CC---CCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 01 12346678889999999999999998753
No 239
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=2.8e-34 Score=297.74 Aligned_cols=244 Identities=21% Similarity=0.299 Sum_probs=186.2
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+++.+ +++.||+|++.... ...+.+.+|+.++..+ +|+||+++++++.+++..++||||++
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~ 84 (331)
T cd05597 6 LKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNG-DRRWITNLHYAFQDENNLYLVMDYYV 84 (331)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCCCceEEEEecCCeEEEEEecCC
Confidence 467999999999999965 58899999986432 2335578888888888 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT- 492 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~- 492 (627)
+|+|.+++.+. ...+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 85 g~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 157 (331)
T cd05597 85 GGDLLTLLSKF----EDRLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT 157 (331)
T ss_pred CCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCceeecCCCCC
Confidence 99999999753 235889999999999999999999998 9999999999999999999999999987653321
Q ss_pred ----CCCCCccccCccccCC-----CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006884 493 ----TATRTIGYRAPEVTET-----RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 493 ----~~~~t~~y~aPE~~~~-----~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
...||+.|+|||++.. ..++.++|||||||++|||++|+.||.... ..+....+........ +.
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~------~~~~~~~i~~~~~~~~-~~ 230 (331)
T cd05597 158 VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAES------LVETYGKIMNHKEHFQ-FP 230 (331)
T ss_pred ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCC------HHHHHHHHHcCCCccc-CC
Confidence 2357899999999863 457889999999999999999999997532 1122222221111000 00
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcc--cCCCCCCCCHHHHHHH
Q 006884 564 VELLKYQDVEEEMVQMLQIALSCV--AKVPDSRPKMDDVVRM 603 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl--~~~P~~RPs~~ev~~~ 603 (627)
. .....++. +.+++.+|+ ..++..||++++++++
T Consensus 231 ~---~~~~~~~~---~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 231 P---DVTDVSEE---AKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred C---ccCCCCHH---HHHHHHHHccCcccccCCCCHHHHhcC
Confidence 0 01112333 344555555 4444558899999886
No 240
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.4e-34 Score=293.14 Aligned_cols=242 Identities=24% Similarity=0.374 Sum_probs=190.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEee------CCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS------KDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~------~~~~~lv~e~ 411 (627)
.+.||+|+||.||+|... +++.+|+|.+........++..|+.++.++.+|+|++++++++.. .+..+++|||
T Consensus 21 ~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~ 100 (282)
T cd06636 21 VEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEF 100 (282)
T ss_pred heeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEe
Confidence 468999999999999964 688999998865544556788899999998789999999999853 4567899999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC-
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF- 490 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~- 490 (627)
+++|+|.+++...+ ...+++..+..++.|++.|+.|||+.+ |+||||||+||++++++.++|+|||++.....
T Consensus 101 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~ 174 (282)
T cd06636 101 CGAGSVTDLVKNTK---GNALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 174 (282)
T ss_pred CCCCcHHHHHHHcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCcchhhhhcc
Confidence 99999999997643 235788889999999999999999998 99999999999999999999999999876532
Q ss_pred ---CCCCCCCccccCccccC-----CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006884 491 ---PTTATRTIGYRAPEVTE-----TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 491 ---~~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
.....++..|+|||.+. ...++.++|||||||++|||++|+.||......... .. ........
T Consensus 175 ~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~------~~-~~~~~~~~-- 245 (282)
T cd06636 175 VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL------FL-IPRNPPPK-- 245 (282)
T ss_pred ccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhh------hh-HhhCCCCC--
Confidence 22345788899999875 346788999999999999999999999653211100 00 00000000
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
. ........+.+++.+||..+|.+||++.|+++
T Consensus 246 ---~----~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 246 ---L----KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred ---C----cccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 0 01122346778889999999999999999975
No 241
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=2.9e-34 Score=292.49 Aligned_cols=241 Identities=21% Similarity=0.326 Sum_probs=190.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
.+.||+|+||.||+|... +++.|++|.+.... ...+.+.+|+++++.+ +|+|++++++.+..+...++||||+++++
T Consensus 17 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 95 (292)
T cd06644 17 IGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATC-NHPYIVKLLGAFYWDGKLWIMIEFCPGGA 95 (292)
T ss_pred hheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCcEeeeEEEEEeCCeEEEEEecCCCCc
Confidence 467999999999999976 48899999986543 2346688899999999 89999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----C
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----T 492 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~----~ 492 (627)
|..++.+.. ..+++..+..++.|++.|+.|||+.+ ++||||||+||+++.++.+||+|||++...... .
T Consensus 96 l~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 168 (292)
T cd06644 96 VDAIMLELD----RGLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRD 168 (292)
T ss_pred HHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccceeccccccccc
Confidence 988876532 35899999999999999999999988 999999999999999999999999998654322 2
Q ss_pred CCCCCccccCccccC-----CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006884 493 TATRTIGYRAPEVTE-----TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~-----~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
...++..|+|||++. ...++.++|||||||++|||++|+.||..... ............ .. .
T Consensus 169 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~~~-~~-----~- 235 (292)
T cd06644 169 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP------MRVLLKIAKSEP-PT-----L- 235 (292)
T ss_pred eecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH------HHHHHHHhcCCC-cc-----C-
Confidence 334678899999984 34568899999999999999999999865321 111111111110 00 0
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
........++.+++.+||..+|++||+++|+++
T Consensus 236 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 236 --SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred --CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 011122345678889999999999999999976
No 242
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=3.7e-34 Score=290.52 Aligned_cols=256 Identities=23% Similarity=0.338 Sum_probs=190.5
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|++|.||+|+.+ +++.||+|+++... ...+.+.+|++++..+ +|||++++++++..++..++|+||++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~- 82 (285)
T cd07861 5 IEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKEL-QHPNIVCLQDVLMQESRLYLIFEFLS- 82 (285)
T ss_pred eeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhc-CCCCEeeeEEEEeeCCeEEEEEecCC-
Confidence 367999999999999975 68999999986432 2346788899999999 89999999999999999999999997
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
++|.+++..... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 83 ~~l~~~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 157 (285)
T cd07861 83 MDLKKYLDSLPK--GQYMDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRV 157 (285)
T ss_pred CCHHHHHhcCCC--CCcCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCCCcEEECcccceeecCCCccc
Confidence 689888865432 346899999999999999999999998 999999999999999999999999998765432
Q ss_pred -CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHh---hhccc--ccccc-
Q 006884 492 -TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVV---REEWT--AEVFD- 563 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~d- 563 (627)
....+++.|+|||++.+ ..++.++||||||+++|||++|+.||......+ .......... ...+. ....+
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (285)
T cd07861 158 YTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEID--QLFRIFRILGTPTEDVWPGVTSLPDY 235 (285)
T ss_pred ccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHHHHhCCCChhhhhcchhhHHH
Confidence 22345788999998865 457899999999999999999999997542210 0000000000 00000 00000
Q ss_pred -hhhhc--CCC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 564 -VELLK--YQD----VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 564 -~~l~~--~~~----~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
..... ... ......++.+++.+||..||++|||+.+++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 236 KNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred HhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 00000 000 00122355678889999999999999999753
No 243
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=2e-34 Score=291.30 Aligned_cols=238 Identities=23% Similarity=0.341 Sum_probs=193.1
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|... ++..||+|.+.... ...+.+.+|++++.++ +|+||+++++.+..+...++|+||++++
T Consensus 9 ~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 87 (277)
T cd06642 9 LERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYITRYYGSYLKGTKLWIIMEYLGGG 87 (277)
T ss_pred HHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcC-CCCccHhhhcccccCCceEEEEEccCCC
Confidence 467999999999999865 57889999886432 2345788999999999 8999999999999999999999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC---
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT--- 492 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~--- 492 (627)
+|.+++.. ..+++..+..++.|++.|+.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 88 ~L~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~ 158 (277)
T cd06642 88 SALDLLKP------GPLEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR 158 (277)
T ss_pred cHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEeCCCCEEEccccccccccCcchhh
Confidence 99998863 25889999999999999999999988 9999999999999999999999999987654322
Q ss_pred -CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006884 493 -TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 493 -~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
...++..|+|||++.+..++.++||||||+++|||++|+.||........ .. ....... +. .
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~------~~-~~~~~~~-----~~-----~ 221 (277)
T cd06642 159 NTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV------LF-LIPKNSP-----PT-----L 221 (277)
T ss_pred hcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH------Hh-hhhcCCC-----CC-----C
Confidence 23467789999999988899999999999999999999999874322110 00 0111100 00 0
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.......+.+++.+||+.+|++||++.|++++
T Consensus 222 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 222 EGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred CcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 11233457788899999999999999999984
No 244
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.9e-34 Score=289.48 Aligned_cols=240 Identities=24% Similarity=0.376 Sum_probs=191.5
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEeccccc-------CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAA-------TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||.||+|...+++.+|+|.+..... ..+.+.+|+++++.+ +|+||+++.+++.+.+..++++||
T Consensus 5 ~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~ 83 (265)
T cd06631 5 GEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSL-KHVNIVQYLGTCLDDNTISIFMEF 83 (265)
T ss_pred cceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhc-CCCCEeeEeeEeecCCeEEEEEec
Confidence 467999999999999988899999998864321 124578899999999 899999999999999999999999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC-
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF- 490 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~- 490 (627)
+++++|.+++.+. ..+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++.....
T Consensus 84 ~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 155 (265)
T cd06631 84 VPGGSISSILNRF-----GPLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWV 155 (265)
T ss_pred CCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchhhHhhhhc
Confidence 9999999999754 24788999999999999999999988 99999999999999999999999999875421
Q ss_pred ---------CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccc
Q 006884 491 ---------PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEV 561 (627)
Q Consensus 491 ---------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (627)
.....++..|+|||++.+..++.++||||||+++|||++|+.||...... ... .........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-----~~~-~~~~~~~~~--- 226 (265)
T cd06631 156 GLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRL-----AAM-FYIGAHRGL--- 226 (265)
T ss_pred cccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChH-----HHH-HHhhhccCC---
Confidence 11234678899999999888999999999999999999999999753211 100 000000000
Q ss_pred cchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 562 FDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 562 ~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.+.. .......+.+++.+||+.+|++||++.|+++
T Consensus 227 -~~~~-----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 227 -MPRL-----PDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred -CCCC-----CCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0000 0112335677888999999999999999875
No 245
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=5.3e-34 Score=284.58 Aligned_cols=242 Identities=23% Similarity=0.380 Sum_probs=196.9
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||.++.. +++.+++|.+.... ...+++.+|+++++++ +|+||+++++++.+.+..+++|||+++
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~~~e~~~~ 83 (256)
T cd08221 5 IRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLL-QHPNIIAYYNHFMDDNTLLIEMEYANG 83 (256)
T ss_pred eeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhC-CCCCeeEEEeEEecCCeEEEEEEecCC
Confidence 368999999999999854 68899999876432 2346788999999999 999999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC--
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-- 492 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~-- 492 (627)
|+|.+++.... ...+++..+..++.|++.|+.|||+.+ ++|+||+|+||++++++.+||+|||.+.......
T Consensus 84 ~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~ 157 (256)
T cd08221 84 GTLYDKIVRQK---GQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSM 157 (256)
T ss_pred CcHHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcceEEccccccc
Confidence 99999997643 246899999999999999999999988 9999999999999999999999999987664332
Q ss_pred --CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 493 --TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 493 --~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
...+++.|+|||+..+..++.++||||||+++|||++|+.||.... ..+....+.......
T Consensus 158 ~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~------~~~~~~~~~~~~~~~----------- 220 (256)
T cd08221 158 AETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATN------PLNLVVKIVQGNYTP----------- 220 (256)
T ss_pred ccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHcCCCCC-----------
Confidence 3457889999999988889999999999999999999999997532 122222222111110
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMI 604 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L 604 (627)
.......++.+++.+||..+|++||+++|+++++
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 221 VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred CccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 0012234567788899999999999999998753
No 246
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.9e-34 Score=303.32 Aligned_cols=187 Identities=24% Similarity=0.345 Sum_probs=160.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeC------CceeEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSK------DEKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~------~~~~lv 408 (627)
.+.||+|+||.||++... .++.||||++.... ...+.+.+|+.+++.+ +||||+++++++... ...++|
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~ii~~~~~~~~~~~~~~~~~~~lv 107 (364)
T cd07875 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIV 107 (364)
T ss_pred EEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhc-CCCCccccceeecccccccccCeEEEE
Confidence 468999999999999965 58899999987532 2345678899999999 999999999887543 346899
Q ss_pred EecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 409 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
|||+++ +|..++.. .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 108 ~e~~~~-~l~~~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 176 (364)
T cd07875 108 MELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 176 (364)
T ss_pred EeCCCC-CHHHHHHh-------cCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCCCcEEEEeCCCcccc
Confidence 999965 67777643 3788899999999999999999998 999999999999999999999999999876
Q ss_pred CCC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 006884 489 NFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHS 537 (627)
Q Consensus 489 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~ 537 (627)
... ....+|..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 177 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 228 (364)
T cd07875 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228 (364)
T ss_pred CCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Confidence 443 2345788999999999999999999999999999999999999754
No 247
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=2e-34 Score=291.70 Aligned_cols=242 Identities=22% Similarity=0.347 Sum_probs=192.5
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
.+.||+|+||.||++..+ ++..||+|.+.... ...+.+.+|+++++++ +|+|++++++.+..+...++||||+++++
T Consensus 10 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 88 (280)
T cd06611 10 IGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSEC-KHPNIVGLYEAYFYENKLWILIEFCDGGA 88 (280)
T ss_pred HHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhC-CCCceeEEEEEEecCCeEEEEeeccCCCc
Confidence 567999999999999975 68899999986442 2345788999999999 79999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----C
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----T 492 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~----~ 492 (627)
|.+++.... ..+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++...... .
T Consensus 89 L~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 161 (280)
T cd06611 89 LDSIMLELE----RGLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRD 161 (280)
T ss_pred HHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccchhhcccccccc
Confidence 999987542 35899999999999999999999998 999999999999999999999999998665322 2
Q ss_pred CCCCCccccCccccC-----CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006884 493 TATRTIGYRAPEVTE-----TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~-----~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
...+++.|+|||++. +..++.++||||||+++|||++|+.||...... +.......... . .+.
T Consensus 162 ~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~-~-----~~~ 229 (280)
T cd06611 162 TFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM------RVLLKILKSEP-P-----TLD 229 (280)
T ss_pred eeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH------HHHHHHhcCCC-C-----CcC
Confidence 234788899999874 345678999999999999999999999754211 11111111110 0 000
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
. .......+.+++.+||+.+|.+||++++++++
T Consensus 230 ~---~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 230 Q---PSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred C---cccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 0 11122356678889999999999999999875
No 248
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3e-34 Score=291.47 Aligned_cols=245 Identities=22% Similarity=0.355 Sum_probs=193.0
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||++..+ ++..||+|.+..... ....+.+|++++.++ +|+||+++++.+...+..++|+||++++
T Consensus 6 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (286)
T cd06622 6 LDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKA-VSPYIVDFYGAFFIEGAVYMCMEYMDAG 84 (286)
T ss_pred hhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhc-CCCcHHhhhhheecCCeEEEEEeecCCC
Confidence 578999999999999976 689999998865322 245788999999999 9999999999999999999999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--C
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE-GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--T 492 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--~ 492 (627)
+|..++..... ...+++..+..++.+++.||.|||+. + |+||||||+||+++.++.+||+|||.+...... .
T Consensus 85 ~l~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 159 (286)
T cd06622 85 SLDKLYAGGVA--TEGIPEDVLRRITYAVVKGLKFLKEEHN---IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAK 159 (286)
T ss_pred CHHHHHHhccc--cCCCCHHHHHHHHHHHHHHHHHHHhcCC---EeeCCCCHHHEEECCCCCEEEeecCCcccccCCccc
Confidence 99999875321 23689999999999999999999974 5 999999999999999999999999998765332 2
Q ss_pred CCCCCccccCccccCCCC------CCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhh
Q 006884 493 TATRTIGYRAPEVTETRK------ASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVEL 566 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~------~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 566 (627)
...++..|+|||++.+.. ++.++|||||||++|||++|+.||...... ........... ....
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~---~~~~~~~~~~~-~~~~------- 228 (286)
T cd06622 160 TNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA---NIFAQLSAIVD-GDPP------- 228 (286)
T ss_pred cCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh---hHHHHHHHHhh-cCCC-------
Confidence 344678899999985543 478999999999999999999999753211 11111111111 1000
Q ss_pred hcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 567 LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 567 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
........++.+++.+||..+|++||++++++.+
T Consensus 229 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 229 ---TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred ---CCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 0111233456778889999999999999999884
No 249
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=6.3e-34 Score=288.90 Aligned_cols=256 Identities=21% Similarity=0.314 Sum_probs=192.3
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||+|+.+ +++.||+|++.... ...+.+.+|++++..+ +|+|++++++++......++||||+++
T Consensus 6 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~v~e~~~~ 84 (286)
T cd07847 6 LSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQL-KHPNLVNLIEVFRRKRKLHLVFEYCDH 84 (286)
T ss_pred eeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhC-CCCCEeeeeeEEeeCCEEEEEEeccCc
Confidence 367999999999999976 58999999886432 2345678999999999 899999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC--
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-- 492 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~-- 492 (627)
++|..+.... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 85 ~~l~~~~~~~-----~~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 156 (286)
T cd07847 85 TVLNELEKNP-----RGVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFARILTGPGDD 156 (286)
T ss_pred cHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECccccceecCCCccc
Confidence 9888776532 34899999999999999999999988 9999999999999999999999999998764432
Q ss_pred --CCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCC-HHHHHHHHhh--------hccccc
Q 006884 493 --TATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVD-LPRWVRSVVR--------EEWTAE 560 (627)
Q Consensus 493 --~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~-~~~~~~~~~~--------~~~~~~ 560 (627)
...++..|+|||++.+ ..++.++||||||+++|||++|+.||.+....+... +......... ......
T Consensus 157 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (286)
T cd07847 157 YTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKG 236 (286)
T ss_pred ccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccccc
Confidence 2346778999999865 557899999999999999999999997543221100 0000000000 000000
Q ss_pred ccchhhhcCCCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 561 VFDVELLKYQDV----EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 561 ~~d~~l~~~~~~----~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
...+........ +.....+.+++.+||+.+|++||++.|++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 237 LSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred ccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 000000000000 1113457789999999999999999999753
No 250
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=2.2e-34 Score=289.60 Aligned_cols=247 Identities=19% Similarity=0.339 Sum_probs=193.5
Q ss_pred hcccCcCCceEEEEEEEcC--CcEEEEEEecccc-----------cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCce
Q 006884 339 AEVLGKGSYGSTYKAILED--GTTVVVKRLREVA-----------ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEK 405 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~-----------~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~ 405 (627)
.+.||+|+||.||+|..+. ++.+|+|.+.... ....++..|+.++.+..+|+||+++++++..++..
T Consensus 5 ~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 84 (269)
T cd08528 5 LEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRL 84 (269)
T ss_pred hhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeE
Confidence 4679999999999999764 6889999875321 12245667888777645999999999999999999
Q ss_pred eEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCeEecCCCCeEEeeccc
Q 006884 406 LVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS-EGGAKFTHGNIKSSNVLLTQDLNGCISDVGL 484 (627)
Q Consensus 406 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~ 484 (627)
+++|||+++++|.+++..... ....+++..+++++.|++.||.|||+ .+ ++|+||+|+||+++.++.+||+|||.
T Consensus 85 ~lv~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~~~---i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 85 YIVMDLIEGAPLGEHFNSLKE-KKQRFTEERIWNIFVQMVLALRYLHKEKR---IVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred EEEEecCCCCcHHHHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHhccCCc---eeecCCCHHHEEECCCCcEEEecccc
Confidence 999999999999998864322 13468999999999999999999996 55 99999999999999999999999999
Q ss_pred ccccCCC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccc
Q 006884 485 AHLINFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEV 561 (627)
Q Consensus 485 a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (627)
+...... ....++..|+|||...+..++.++||||||+++|||++|+.||.... ............. ...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~------~~~~~~~~~~~~~-~~~ 233 (269)
T cd08528 161 AKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTN------MLSLATKIVEAVY-EPL 233 (269)
T ss_pred eeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccC------HHHHHHHHhhccC-CcC
Confidence 9765433 23446788999999998889999999999999999999999986432 1111111111110 000
Q ss_pred cchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 006884 562 FDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605 (627)
Q Consensus 562 ~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~ 605 (627)
........+.+++.+||+.+|++||++.|+..+++
T Consensus 234 ---------~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 234 ---------PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred ---------CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 00012245677888999999999999999999886
No 251
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=3.5e-34 Score=288.03 Aligned_cols=241 Identities=25% Similarity=0.356 Sum_probs=188.3
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
..||+|+||.||+|... ++..|++|.+.... ...+.+.+|++++..+ +|+||+++++++...+..++|+||+++++|
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 92 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYL-KHRNIVQYLGSDSENGFFKIFMEQVPGGSL 92 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhc-CCCCeeeeeeeeccCCEEEEEEecCCCCCH
Confidence 57999999999999965 57789999886543 2456788999999999 999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCC--CHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC-CCCeEEeecccccccCCC---
Q 006884 418 FMLLHRNRSDGGTAL--DWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ-DLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l--~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~-~~~~ki~DfG~a~~~~~~--- 491 (627)
.+++.... ..+ ++..+..++.|++.||.|||+.+ |+||||||+||+++. ++.++|+|||.+......
T Consensus 93 ~~~l~~~~----~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 165 (268)
T cd06624 93 SALLRSKW----GPLKDNEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPC 165 (268)
T ss_pred HHHHHHhc----ccCCCcHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCeEEEecchhheecccCCCc
Confidence 99997542 234 78888999999999999999998 999999999999986 679999999998765321
Q ss_pred -CCCCCCccccCccccCCC--CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006884 492 -TTATRTIGYRAPEVTETR--KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~--~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
....++..|+|||++... .++.++||||||+++|+|++|+.||........ ..+....... .+..
T Consensus 166 ~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~---~~~~~~~~~~-------~~~~-- 233 (268)
T cd06624 166 TETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA---AMFKVGMFKI-------HPEI-- 233 (268)
T ss_pred cccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh---hHhhhhhhcc-------CCCC--
Confidence 123467899999998654 378999999999999999999999975322110 0000000000 0000
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 569 YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
......++.+++.+||+.+|++|||+.|++++
T Consensus 234 ---~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 234 ---PESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred ---CcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 01122356678889999999999999999764
No 252
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=5.5e-34 Score=284.22 Aligned_cols=241 Identities=24% Similarity=0.436 Sum_probs=192.3
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHH
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 418 (627)
.+.||+|+||.||++.. .++.||+|.++.. .....+.+|+.++.++ +|||++++++++..+ ..+++|||+++++|.
T Consensus 11 ~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~-~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~-~~~~v~e~~~~~~L~ 86 (254)
T cd05083 11 GEIIGEGEFGAVLQGEY-TGQKVAVKNIKCD-VTAQAFLEETAVMTKL-HHKNLVRLLGVILHN-GLYIVMELMSKGNLV 86 (254)
T ss_pred eeeeccCCCCceEeccc-CCCceEEEeecCc-chHHHHHHHHHHHHhC-CCCCcCeEEEEEcCC-CcEEEEECCCCCCHH
Confidence 57899999999999975 4788999988643 2456788999999999 999999999998654 578999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-CCCCC
Q 006884 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-TATRT 497 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~-~~~~t 497 (627)
+++.... ...+++..+..++.|++.|+.|||+.+ ++||||||+||+++.++.+||+|||+++...... ....+
T Consensus 87 ~~l~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 160 (254)
T cd05083 87 NFLRTRG---RALVSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLP 160 (254)
T ss_pred HHHHhcC---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCC
Confidence 9997542 235889999999999999999999988 9999999999999999999999999987654322 22345
Q ss_pred ccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHH
Q 006884 498 IGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEM 576 (627)
Q Consensus 498 ~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 576 (627)
..|+|||++.+..++.++||||||+++|||++ |+.||..... ....... ...... + ......
T Consensus 161 ~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~------~~~~~~~-~~~~~~---~-------~~~~~~ 223 (254)
T cd05083 161 VKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL------KEVKECV-EKGYRM---E-------PPEGCP 223 (254)
T ss_pred ceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH------HHHHHHH-hCCCCC---C-------CCCcCC
Confidence 67999999988899999999999999999998 9999875432 1111111 111100 0 011223
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 006884 577 VQMLQIALSCVAKVPDSRPKMDDVVRMIEQ 606 (627)
Q Consensus 577 ~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~ 606 (627)
..+.+++.+||+.+|++||+++++++.|++
T Consensus 224 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 224 ADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 456788889999999999999999998864
No 253
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=8e-34 Score=286.94 Aligned_cols=238 Identities=23% Similarity=0.336 Sum_probs=194.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|... ++..||+|.+.... .....+.+|++++.++ .|+||+++++.+.++...++||||+++|
T Consensus 9 ~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 87 (277)
T cd06640 9 LERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKGTKLWIIMEYLGGG 87 (277)
T ss_pred hhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCEEEEEEecCCCC
Confidence 367999999999999965 58899999886442 2345788899999999 9999999999999999999999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC---
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT--- 492 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~--- 492 (627)
+|.+++... .+++.....++.|++.|+.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 88 ~L~~~i~~~------~l~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~ 158 (277)
T cd06640 88 SALDLLRAG------PFDEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR 158 (277)
T ss_pred cHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCCCCEEEcccccceeccCCcccc
Confidence 999998642 4788899999999999999999988 9999999999999999999999999997654322
Q ss_pred -CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006884 493 -TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 493 -~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
...++..|+|||++.+..++.++||||||+++|||++|+.||........ ... ...... ...
T Consensus 159 ~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~------~~~-~~~~~~----------~~~ 221 (277)
T cd06640 159 NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV------LFL-IPKNNP----------PTL 221 (277)
T ss_pred ccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH------hhh-hhcCCC----------CCC
Confidence 23467789999999888899999999999999999999999975432111 000 000000 111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.......+.+++.+||+.+|++||++.+++++
T Consensus 222 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 222 TGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred chhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 22344567789999999999999999999876
No 254
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=5.3e-34 Score=289.05 Aligned_cols=244 Identities=22% Similarity=0.342 Sum_probs=188.5
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||++..+ +|+.||+|+++.... ...++..|++...+..+|||++++++++..++..++++||++ |
T Consensus 6 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~ 84 (283)
T cd06617 6 IEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMD-T 84 (283)
T ss_pred EEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhc-c
Confidence 367999999999999976 689999999875432 344566677765555599999999999999999999999996 6
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC--
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE-GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-- 492 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~-- 492 (627)
+|.+++...... ...+++..+..++.|++.||.|||++ + ++||||||+||+++.++.+||+|||+++......
T Consensus 85 ~l~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~~---i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~ 160 (283)
T cd06617 85 SLDKFYKKVYDK-GLTIPEDILGKIAVSIVKALEYLHSKLS---VIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAK 160 (283)
T ss_pred cHHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence 888888654322 35689999999999999999999987 6 9999999999999999999999999998654322
Q ss_pred -CCCCCccccCccccCC----CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006884 493 -TATRTIGYRAPEVTET----RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 493 -~~~~t~~y~aPE~~~~----~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
...++..|+|||++.+ ..++.++|+||||+++|||++|+.||...... .+......... .... .
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~~~~~~-~~~~-----~ 229 (283)
T cd06617 161 TIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP-----FQQLKQVVEEP-SPQL-----P 229 (283)
T ss_pred ccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC-----HHHHHHHHhcC-CCCC-----C
Confidence 2346788999998865 45688999999999999999999999642211 11111111110 0000 0
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
. .....++.+++.+||..+|++||+++++++
T Consensus 230 ~----~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 230 A----EKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred c----cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 112245678888999999999999999987
No 255
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=6.3e-34 Score=284.95 Aligned_cols=243 Identities=23% Similarity=0.363 Sum_probs=194.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
.+.||+|+||.||++... +++.+++|.+.... ...+.+.+|+++++.+ +||||+++++++...+..+++|||+++++
T Consensus 8 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l~~e~~~~~~ 86 (262)
T cd06613 8 IQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKEC-RHPNIVAYFGSYLRRDKLWIVMEYCGGGS 86 (262)
T ss_pred EEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhC-CCCChhceEEEEEeCCEEEEEEeCCCCCc
Confidence 367999999999999965 57889999987543 2456788999999999 99999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----C
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----T 492 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~----~ 492 (627)
|.+++.... ..+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.+||+|||.+...... .
T Consensus 87 l~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~ 159 (262)
T cd06613 87 LQDIYQVTR----GPLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRK 159 (262)
T ss_pred HHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccchhhhhhhhccc
Confidence 999987642 35889999999999999999999998 999999999999999999999999998765432 2
Q ss_pred CCCCCccccCccccCCC---CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 493 TATRTIGYRAPEVTETR---KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~---~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
...++..|+|||...+. .++.++||||||+++|||++|+.||....... -........... .. .
T Consensus 160 ~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~------~~~~~~~~~~~~----~~---~ 226 (262)
T cd06613 160 SFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMR------ALFLISKSNFPP----PK---L 226 (262)
T ss_pred cccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhccCCC----cc---c
Confidence 33567789999999776 88999999999999999999999997532111 011111110000 00 0
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
........++.+++.+||..+|.+||++.+++.
T Consensus 227 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 227 KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 111233456778999999999999999999975
No 256
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-35 Score=301.84 Aligned_cols=240 Identities=26% Similarity=0.391 Sum_probs=192.3
Q ss_pred cccCcCCceEEEEEEEcCC-cEEEEEEeccccc-CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 340 EVLGKGSYGSTYKAILEDG-TTVVVKRLREVAA-TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~-~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
-+||+|.||+||.|++.+. ..+|||-+..... ..+-...|+.+-+++ +|.|||+++|.+.+++..-+.||-.+||+|
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~L-rHkNIVrYLGs~senGf~kIFMEqVPGGSL 659 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTL-RHKNIVRYLGSVSENGFFKIFMEQVPGGSL 659 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHH-hhHhHHHHhhccCCCCeEEEEeecCCCCcH
Confidence 3799999999999997754 4689998865433 345678889999999 999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCC--CHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC-CCCeEEeecccccccCC----
Q 006884 418 FMLLHRNRSDGGTAL--DWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ-DLNGCISDVGLAHLINF---- 490 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l--~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~-~~~~ki~DfG~a~~~~~---- 490 (627)
.+.|+.... ++ .+...-....||++||.|||+.. |||||||-+|||++. .|.+||+|||-++.+..
T Consensus 660 SsLLrskWG----PlKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~ 732 (1226)
T KOG4279|consen 660 SSLLRSKWG----PLKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPC 732 (1226)
T ss_pred HHHHHhccC----CCccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhhccCCcc
Confidence 999986532 34 67777888999999999999988 999999999999975 68999999999876632
Q ss_pred CCCCCCCccccCccccCC--CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006884 491 PTTATRTIGYRAPEVTET--RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 491 ~~~~~~t~~y~aPE~~~~--~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
..++.||..|||||++.. +.|...+|||||||++.||.||++||.+...... .+++-+.. . ..
T Consensus 733 TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA--------AMFkVGmy----K---vH 797 (1226)
T KOG4279|consen 733 TETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA--------AMFKVGMY----K---VH 797 (1226)
T ss_pred ccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH--------hhhhhcce----e---cC
Confidence 346779999999999965 4588999999999999999999999986543211 11111111 1 01
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 569 YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.+-.++-..+...++.+|+.++|.+||++.++++
T Consensus 798 P~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 798 PPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred CCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 1222344455667888999999999999999986
No 257
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=3.4e-34 Score=289.15 Aligned_cols=239 Identities=22% Similarity=0.360 Sum_probs=194.5
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||.|+||.||+|... +++.||+|.+.... .....+.+|+++++.+ +|+|++++.+++.++...++|+||++++
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 84 (274)
T cd06609 6 LECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQC-RSPYITKYYGSFLKGSKLWIIMEYCGGG 84 (274)
T ss_pred hhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHc-CCCCeeeeeEEEEECCeEEEEEEeeCCC
Confidence 367999999999999965 68899999986543 2345788899999999 8999999999999999999999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~---- 491 (627)
+|.+++... .+++..+..++.|++.|+.|||+.+ ++|+||+|+||++++++.++|+|||+++.....
T Consensus 85 ~L~~~~~~~------~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~ 155 (274)
T cd06609 85 SCLDLLKPG------KLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKR 155 (274)
T ss_pred cHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEcccccceeeccccccc
Confidence 999998753 5899999999999999999999998 999999999999999999999999999876533
Q ss_pred CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006884 492 TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
....++..|+|||++.+..++.++||||||+++|||++|+.||....... .. ........... .. ..
T Consensus 156 ~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~------~~-~~~~~~~~~~~-----~~-~~ 222 (274)
T cd06609 156 NTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR------VL-FLIPKNNPPSL-----EG-NK 222 (274)
T ss_pred ccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH------HH-HHhhhcCCCCC-----cc-cc
Confidence 23456778999999998889999999999999999999999997543111 11 11111111110 00 00
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
....+.+++.+||..+|++||++++++++
T Consensus 223 ---~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 223 ---FSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred ---cCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 23356778889999999999999999873
No 258
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.1e-33 Score=282.52 Aligned_cols=241 Identities=24% Similarity=0.394 Sum_probs=192.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCC-ceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD-EKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~-~~~lv~e~~~ 413 (627)
.+.||+|++|.||++..+ +++.||+|++.... ...+.+.+|+++++++ +|+|++++.+.+...+ ..+++|||++
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~lv~e~~~ 83 (257)
T cd08223 5 VRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQL-KHPNIVAYRESWEGEDGLLYIVMGFCE 83 (257)
T ss_pred EEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhC-CCCCeeeeeeeecCCCCEEEEEecccC
Confidence 467999999999999965 57889999986432 2345688899999999 8999999998876444 5789999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+++|.+++.... ...+++.++..++.+++.|+.|||+.+ ++||||||+||+++.++.++|+|||++......
T Consensus 84 ~~~l~~~l~~~~---~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~ 157 (257)
T cd08223 84 GGDLYHKLKEQK---GKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD 157 (257)
T ss_pred CCcHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccceEEecccCC
Confidence 999999997642 245899999999999999999999998 999999999999999999999999998766332
Q ss_pred --CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 492 --TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
....+++.|+|||+..+..++.++||||||++++||++|+.||...+ .......... .....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~------~~~~~~~~~~-~~~~~--------- 221 (257)
T cd08223 158 MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD------MNSLVYRIIE-GKLPP--------- 221 (257)
T ss_pred ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC------HHHHHHHHHh-cCCCC---------
Confidence 23346788999999999899999999999999999999999987432 1222222111 11100
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
........+.+++.+|++.+|++||++.+++++
T Consensus 222 -~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 222 -MPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred -CccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 011233467788999999999999999999764
No 259
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=2.8e-34 Score=289.86 Aligned_cols=247 Identities=22% Similarity=0.377 Sum_probs=194.2
Q ss_pred hcccCcCCceEEEEEEEc------CCcEEEEEEecccccC--HHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILE------DGTTVVVKRLREVAAT--KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~--~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|+.+ +.+.|++|.+...... .+++.+|++++.++ +|+||+++++++.+.+..++|||
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e 88 (275)
T cd05046 10 ITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKL-SHKNVVRLLGLCREAEPHYMILE 88 (275)
T ss_pred eeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhc-CCcceeeeEEEECCCCcceEEEE
Confidence 367999999999999964 2467999987654332 46789999999999 99999999999998889999999
Q ss_pred cCCCCcHHHHhhhcCCCC----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccc
Q 006884 411 YMPAGSLFMLLHRNRSDG----GTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH 486 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~----~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 486 (627)
|+++|+|.+++....... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++++|||+++
T Consensus 89 ~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~~~~~~~ 165 (275)
T cd05046 89 YTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVKVSLLSLSK 165 (275)
T ss_pred ecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEEEccccccc
Confidence 999999999997654211 125899999999999999999999998 9999999999999999999999999987
Q ss_pred ccCCC-----CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccccc
Q 006884 487 LINFP-----TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAE 560 (627)
Q Consensus 487 ~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (627)
..... ....++..|+|||.+.+..++.++||||||+++|++++ |..||..... ...+....... ...
T Consensus 166 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~------~~~~~~~~~~~-~~~ 238 (275)
T cd05046 166 DVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD------EEVLNRLQAGK-LEL 238 (275)
T ss_pred ccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch------HHHHHHHHcCC-cCC
Confidence 54321 12234667999999988888999999999999999999 7888864321 11111111111 000
Q ss_pred ccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 006884 561 VFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605 (627)
Q Consensus 561 ~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~ 605 (627)
. ........+.+++.+||..+|++||++.|++..|.
T Consensus 239 ~---------~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 239 P---------VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred C---------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 0 00112246778889999999999999999999885
No 260
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=7.7e-34 Score=294.70 Aligned_cols=244 Identities=18% Similarity=0.265 Sum_probs=186.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+++.+ +++.+|+|++.+.. .....+..|+.++..+ +|++|+++.+++.+.+..++||||++
T Consensus 6 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ey~~ 84 (332)
T cd05623 6 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG-DNQWITTLHYAFQDENNLYLVMDYYV 84 (332)
T ss_pred EEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhC-CCCCEeeEEEEEecCCEEEEEEeccC
Confidence 468999999999999976 47789999986432 1234577888888888 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|.+++.+.. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 85 ~g~L~~~l~~~~----~~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~ 157 (332)
T cd05623 85 GGDLLTLLSKFE----DRLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 157 (332)
T ss_pred CCcHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchheecccCCc
Confidence 999999997642 35889999999999999999999998 999999999999999999999999998764322
Q ss_pred ---CCCCCCccccCccccC-----CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006884 492 ---TTATRTIGYRAPEVTE-----TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 492 ---~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
....||+.|+|||++. ...++.++|||||||++|||++|+.||.... ..+....+........ +.
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~------~~~~~~~i~~~~~~~~-~p 230 (332)
T cd05623 158 VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES------LVETYGKIMNHKERFQ-FP 230 (332)
T ss_pred ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC------HHHHHHHHhCCCcccc-CC
Confidence 1245899999999986 3467899999999999999999999997532 1222222221111000 00
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcccC--CCCCCCCHHHHHHH
Q 006884 564 VELLKYQDVEEEMVQMLQIALSCVAK--VPDSRPKMDDVVRM 603 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl~~--~P~~RPs~~ev~~~ 603 (627)
.........+.+++.+|+.. ++..|++++|++++
T Consensus 231 ------~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 231 ------AQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred ------CccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 00111223445566676644 44457899999876
No 261
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=4.1e-34 Score=293.53 Aligned_cols=241 Identities=22% Similarity=0.362 Sum_probs=192.9
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|... +++.||+|.+..... ..+++.+|++++..+ +|||++++.+++..++..++|+||++
T Consensus 20 ~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~ 98 (307)
T cd06607 20 LREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQL-RHPNTIEYKGCYLREHTAWLVMEYCL 98 (307)
T ss_pred heeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEEeCCeEEEEHHhhC
Confidence 367999999999999965 689999998864321 235688899999999 89999999999999999999999996
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCC
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTT 493 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~ 493 (627)
|++.+++.... ..+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||++........
T Consensus 99 -g~l~~~~~~~~----~~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~ 170 (307)
T cd06607 99 -GSASDILEVHK----KPLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFGSASLVSPANS 170 (307)
T ss_pred -CCHHHHHHHcc----cCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecCcceecCCCCC
Confidence 57777765432 35899999999999999999999998 99999999999999999999999999987766666
Q ss_pred CCCCccccCccccC---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 494 ATRTIGYRAPEVTE---TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 494 ~~~t~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
..++..|+|||++. ...++.++||||||+++|||++|+.||..... ........... ... .
T Consensus 171 ~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~------~~~~~~~~~~~-~~~---------~ 234 (307)
T cd06607 171 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA------MSALYHIAQND-SPT---------L 234 (307)
T ss_pred ccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccH------HHHHHHHhcCC-CCC---------C
Confidence 67888999999874 45688999999999999999999999864321 11111111110 000 0
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMI 604 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L 604 (627)
........+.+++.+||..+|++||++.+++.+.
T Consensus 235 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 268 (307)
T cd06607 235 SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHR 268 (307)
T ss_pred CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 0122344678889999999999999999998854
No 262
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=3.3e-34 Score=288.02 Aligned_cols=238 Identities=22% Similarity=0.394 Sum_probs=191.0
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccC----------HHHHHHHHHHHHHhccCCceeceeeEEeeCCceeE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAAT----------KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLV 407 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~----------~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~l 407 (627)
...||+|++|.||+|... +++.||+|.+...... .+.+.+|++++..+ +||||+++++++...+..++
T Consensus 5 ~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l 83 (267)
T cd06628 5 GALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKEL-QHENIVQYLGSSLDADHLNI 83 (267)
T ss_pred cceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEEeCCccEE
Confidence 367999999999999864 5789999988643211 24678899999999 99999999999999999999
Q ss_pred EEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccc
Q 006884 408 VYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHL 487 (627)
Q Consensus 408 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~ 487 (627)
++||+++++|.+++... ..+++..+..++.|++.||+|||+.+ ++||||+|+||++++++.++|+|||.++.
T Consensus 84 v~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~dfg~~~~ 155 (267)
T cd06628 84 FLEYVPGGSVAALLNNY-----GAFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISDFGISKK 155 (267)
T ss_pred EEEecCCCCHHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecccCCCcc
Confidence 99999999999999754 34788999999999999999999998 99999999999999999999999999876
Q ss_pred cCCC----------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcc
Q 006884 488 INFP----------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEW 557 (627)
Q Consensus 488 ~~~~----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 557 (627)
.... ....++..|+|||.+.+..++.++||||||+++|+|++|+.||...... ..+.... ...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~-~~~ 228 (267)
T cd06628 156 LEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL------QAIFKIG-ENA 228 (267)
T ss_pred cccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH------HHHHHHh-ccC
Confidence 6421 1223677899999999888999999999999999999999999753211 1111100 100
Q ss_pred cccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 558 TAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 558 ~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.+.. .......+.+++.+||+.+|.+||++.|+++
T Consensus 229 -----~~~~-----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 229 -----SPEI-----PSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred -----CCcC-----CcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 0000 0112345667888999999999999999976
No 263
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-35 Score=272.28 Aligned_cols=257 Identities=21% Similarity=0.355 Sum_probs=196.1
Q ss_pred CCCCCCCHHHHHHHHhcccCcCCceEEEEEEEc-CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEe
Q 006884 324 GSYFNFDLEDLLRASAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYY 400 (627)
Q Consensus 324 ~~~~~~~~~~l~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~ 400 (627)
+..+..++.|+. ....||.|..|.|++++.+ .|...|||.+..... ..+.+...+.++..--.+|.||+.+|||.
T Consensus 84 g~r~~~dindl~--~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi 161 (391)
T KOG0983|consen 84 GQRYQADINDLE--NLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFI 161 (391)
T ss_pred CcccccChHHhh--hHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEe
Confidence 444567788874 3577999999999999976 588999999976533 33556666666655536899999999999
Q ss_pred eCCceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEe
Q 006884 401 SKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCIS 480 (627)
Q Consensus 401 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~ 480 (627)
.+...++.||.|.. -...++.+.+ .++++...-++...+..||.||.+++ .|+|||+||+|||+|+.|++|+|
T Consensus 162 ~n~dV~IcMelMs~-C~ekLlkrik----~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlC 234 (391)
T KOG0983|consen 162 TNTDVFICMELMST-CAEKLLKRIK----GPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLC 234 (391)
T ss_pred eCchHHHHHHHHHH-HHHHHHHHhc----CCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEee
Confidence 99999999999854 4566666543 46888888899999999999998876 59999999999999999999999
Q ss_pred ecccccccCCCC---CCCCCccccCccccCC---CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhh
Q 006884 481 DVGLAHLINFPT---TATRTIGYRAPEVTET---RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVR 554 (627)
Q Consensus 481 DfG~a~~~~~~~---~~~~t~~y~aPE~~~~---~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 554 (627)
|||++..+-++. ...|-+.|||||.+.- ..|+.++||||||++++||.||..||...+.+ .+. +..++.
T Consensus 235 DFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td--Fe~---ltkvln 309 (391)
T KOG0983|consen 235 DFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD--FEV---LTKVLN 309 (391)
T ss_pred cccccceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc--HHH---HHHHHh
Confidence 999998765443 3446788999999853 47899999999999999999999999874322 111 112222
Q ss_pred hcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 555 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
+.. +.+....+ -...+.+++..|+++|+.+||...+++++
T Consensus 310 ~eP------P~L~~~~g---FSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 310 EEP------PLLPGHMG---FSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred cCC------CCCCcccC---cCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 111 11111111 23456778889999999999999988764
No 264
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=2.4e-34 Score=293.71 Aligned_cols=239 Identities=21% Similarity=0.336 Sum_probs=192.2
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
..||+|+||.||++... +++.||+|.+.... ...+.+.+|+.++..+ +|||++++++++...+..++|+||+++++|
T Consensus 27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L 105 (297)
T cd06659 27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDY-QHQNVVEMYKSYLVGEELWVLMEFLQGGAL 105 (297)
T ss_pred hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhC-CCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence 46999999999999965 68999999986432 3456688899999999 899999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----CC
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TT 493 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~----~~ 493 (627)
..++.. ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++...... ..
T Consensus 106 ~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~ 176 (297)
T cd06659 106 TDIVSQ------TRLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS 176 (297)
T ss_pred HHHHhh------cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhHhhcccccccccc
Confidence 988754 24889999999999999999999998 999999999999999999999999998755322 23
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChH
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVE 573 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 573 (627)
..++..|+|||++.+..++.++||||||+++|||++|+.||...... .....+ ....... .....
T Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~------~~~~~~-~~~~~~~-----~~~~~--- 241 (297)
T cd06659 177 LVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV------QAMKRL-RDSPPPK-----LKNAH--- 241 (297)
T ss_pred eecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHH-hccCCCC-----ccccC---
Confidence 34788999999999888999999999999999999999999743211 111111 1110000 00011
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 574 EEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 574 ~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.....+.+++.+|++.+|++||++++++++
T Consensus 242 ~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 242 KISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred CCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 112346678889999999999999999985
No 265
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=6.7e-34 Score=286.73 Aligned_cols=248 Identities=22% Similarity=0.405 Sum_probs=192.7
Q ss_pred hcccCcCCceEEEEEEEc----CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCC------ce
Q 006884 339 AEVLGKGSYGSTYKAILE----DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD------EK 405 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~------~~ 405 (627)
.+.||+|+||.||+|.+. +++.||||.+..... ..+++.+|+++++.+ +||||+++++++.... ..
T Consensus 4 ~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~~ 82 (273)
T cd05074 4 GRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEF-DHPNVIKLIGVSLRSRAKGRLPIP 82 (273)
T ss_pred hhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcC-CCCCcceEEEEEccCCCCCcccce
Confidence 467999999999999854 367899999865432 345688899999999 8999999999886532 23
Q ss_pred eEEEecCCCCcHHHHhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccc
Q 006884 406 LVVYSYMPAGSLFMLLHRNRSD-GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGL 484 (627)
Q Consensus 406 ~lv~e~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~ 484 (627)
+++++|+++|+|..++...+.. ....+++....+++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||.
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~~~~kl~dfg~ 159 (273)
T cd05074 83 MVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN---FIHRDLAARNCMLNENMTVCVADFGL 159 (273)
T ss_pred EEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccchhhEEEcCCCCEEECcccc
Confidence 6889999999999887643221 1235788999999999999999999998 99999999999999999999999999
Q ss_pred ccccCCCC------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcc
Q 006884 485 AHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEW 557 (627)
Q Consensus 485 a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 557 (627)
++...... ...+++.|++||......++.++||||||+++|||++ |+.||...... .+. ........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~---~~~---~~~~~~~~ 233 (273)
T cd05074 160 SKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS---EIY---NYLIKGNR 233 (273)
T ss_pred cccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH---HHH---HHHHcCCc
Confidence 88654321 2224567999999988889999999999999999999 88888753221 111 11111110
Q ss_pred cccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006884 558 TAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607 (627)
Q Consensus 558 ~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~ 607 (627)
.. ........+.+++.+|++.+|++||++.++++.|+++
T Consensus 234 ~~-----------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 234 LK-----------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CC-----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00 0012234678899999999999999999999999876
No 266
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=9.5e-35 Score=303.08 Aligned_cols=256 Identities=25% Similarity=0.317 Sum_probs=188.9
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeC------CceeEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSK------DEKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~------~~~~lv 408 (627)
.+.||+|+||.||++... +++.||||++.... ...+.+.+|++++..+ +|+||+++++++... ...+++
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~~~ 98 (343)
T cd07878 20 LTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHM-KHENVIGLLDVFTPATSIENFNEVYLV 98 (343)
T ss_pred heecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhc-CCCchhhhhhhhcccccccccCcEEEE
Confidence 478999999999999964 67899999986532 2345677899999999 999999999887543 346889
Q ss_pred EecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 409 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
++++ +++|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 99 ~~~~-~~~l~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 168 (343)
T cd07878 99 TNLM-GADLNNIVKC------QKLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQA 168 (343)
T ss_pred eecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCCEEEcCCccceec
Confidence 9987 7899888753 24899999999999999999999998 999999999999999999999999999876
Q ss_pred CCC-CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcc---cccc--
Q 006884 489 NFP-TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEW---TAEV-- 561 (627)
Q Consensus 489 ~~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~---~~~~-- 561 (627)
... ....+|..|+|||++.+ ..++.++|||||||++|||++|+.||......+ .+.... ....... ...+
T Consensus 169 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~ 245 (343)
T cd07878 169 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYID--QLKRIM-EVVGTPSPEVLKKISS 245 (343)
T ss_pred CCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH--HHHHHH-HHhCCCCHHHHHhcch
Confidence 443 33467889999999876 568999999999999999999999997543211 000000 0000000 0000
Q ss_pred -----cchhhhcCC--Ch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhc
Q 006884 562 -----FDVELLKYQ--DV----EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM--IEQIQ 608 (627)
Q Consensus 562 -----~d~~l~~~~--~~----~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~--L~~~~ 608 (627)
+...+.... .. ......+.+++.+|+..||++|||+.|++++ +.+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~ 305 (343)
T cd07878 246 EHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYH 305 (343)
T ss_pred hhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccC
Confidence 000000000 00 0011246788999999999999999999974 44443
No 267
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=5.5e-34 Score=289.79 Aligned_cols=249 Identities=22% Similarity=0.313 Sum_probs=189.0
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||++... +++.||+|.+.... .....+.+|+.++.++..|+||+++++++...+..++++||+..
T Consensus 9 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~- 87 (288)
T cd06616 9 LGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDI- 87 (288)
T ss_pred HHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecccC-
Confidence 467999999999999965 58999999986543 23456888999999996699999999999998899999999864
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE-GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
++.++...........+++....+++.+++.||+|||+. + ++||||||+||+++.++.+||+|||+++.....
T Consensus 88 ~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 164 (288)
T cd06616 88 SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK---IIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAK 164 (288)
T ss_pred CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC---eeccCCCHHHEEEccCCcEEEeecchhHHhccCCcc
Confidence 555443221111124689999999999999999999975 5 999999999999999999999999998765332
Q ss_pred CCCCCCccccCccccCCC---CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006884 492 TTATRTIGYRAPEVTETR---KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~~---~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
....++..|+|||++.+. .++.++||||||+++|||++|+.||.... .............. +.+.
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~~~~~------~~~~- 232 (288)
T cd06616 165 TRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-----SVFDQLTQVVKGDP------PILS- 232 (288)
T ss_pred ccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-----hHHHHHhhhcCCCC------CcCC-
Confidence 233567889999998766 68999999999999999999999997432 11111111111110 0000
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 569 YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.........++.+++.+||+.+|++|||+++|+++
T Consensus 233 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 233 NSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01111233467788889999999999999999874
No 268
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.8e-34 Score=293.87 Aligned_cols=240 Identities=21% Similarity=0.348 Sum_probs=191.6
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
...||+|+||.||++... ++..||||.+.... ...+.+.+|+.++..+ +|+|++++++.+...+..++||||+++++
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~ii~~~~~~~~~~~~~lv~e~~~~~~ 105 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDY-HHENVVDMYNSYLVGDELWVVMEFLEGGA 105 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhC-CCCcHHHHHHheecCCeEEEEEeCCCCCc
Confidence 366999999999999865 58899999886432 2345688899999999 99999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----C
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----T 492 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~----~ 492 (627)
|.+++... .+++.....++.|++.||.|||+.+ |+||||||+||++++++.++|+|||++...... .
T Consensus 106 L~~~~~~~------~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~ 176 (292)
T cd06658 106 LTDIVTHT------RMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRK 176 (292)
T ss_pred HHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCc
Confidence 99988532 4789999999999999999999998 999999999999999999999999998754322 2
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
...++..|+|||+..+..++.++||||||+++|||++|+.||...... ..+.. .... +.......
T Consensus 177 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~------~~~~~-~~~~-----~~~~~~~~--- 241 (292)
T cd06658 177 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL------QAMRR-IRDN-----LPPRVKDS--- 241 (292)
T ss_pred eeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHH-HHhc-----CCCccccc---
Confidence 234678899999998888999999999999999999999999743211 11111 1111 01111011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
......+.+++.+|+..+|.+|||++|++++
T Consensus 242 ~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 242 HKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred cccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 1122345677889999999999999999874
No 269
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=3.1e-34 Score=297.49 Aligned_cols=244 Identities=19% Similarity=0.262 Sum_probs=186.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+++.+ +++.||+|.+.... .....+.+|..++..+ +|+||+.+++++.+.+..++||||++
T Consensus 6 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~l~~~~~~~~~~~lv~Ey~~ 84 (331)
T cd05624 6 IKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNG-DCQWITTLHYAFQDENYLYLVMDYYV 84 (331)
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEEEeCCC
Confidence 468999999999999965 57889999986532 1234577788888887 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT- 492 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~- 492 (627)
+|+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 85 gg~L~~~l~~~~----~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 157 (331)
T cd05624 85 GGDLLTLLSKFE----DRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT 157 (331)
T ss_pred CCcHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEeccceeeccCCCc
Confidence 999999997632 35889999999999999999999998 9999999999999999999999999987654322
Q ss_pred ----CCCCCccccCccccCC-----CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006884 493 ----TATRTIGYRAPEVTET-----RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 493 ----~~~~t~~y~aPE~~~~-----~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
...|++.|+|||++.+ ..++.++||||||+++|||++|+.||..... ......+........ +.
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~------~~~~~~i~~~~~~~~-~p 230 (331)
T cd05624 158 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL------VETYGKIMNHEERFQ-FP 230 (331)
T ss_pred eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH------HHHHHHHHcCCCccc-CC
Confidence 2358899999999865 4678999999999999999999999975321 111222211110000 00
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 006884 564 VELLKYQDVEEEMVQMLQIALSCVAKVPDS--RPKMDDVVRM 603 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~--RPs~~ev~~~ 603 (627)
........++.+++.+|+..++.+ |+++++++++
T Consensus 231 ------~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 231 ------SHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred ------CccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 111112234556677877765543 5688888764
No 270
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=4.4e-34 Score=288.01 Aligned_cols=245 Identities=25% Similarity=0.390 Sum_probs=193.5
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCC------ceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD------EKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~------~~~lv~e~ 411 (627)
.+.||+|+||.||+|..+ +++.+++|++.......+.+.+|++++.++..|+||+++++++.... ..++||||
T Consensus 11 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~ 90 (275)
T cd06608 11 VEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMEL 90 (275)
T ss_pred eeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEc
Confidence 477999999999999975 57889999987665566789999999999978999999999997644 47999999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 491 (627)
+++++|.+++..... ....+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||.+......
T Consensus 91 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~ 166 (275)
T cd06608 91 CGGGSVTDLVKGLRK-KGKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKLVDFGVSAQLDST 166 (275)
T ss_pred CCCCcHHHHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEECCCccceecccc
Confidence 999999999875431 1346899999999999999999999998 999999999999999999999999998765332
Q ss_pred ----CCCCCCccccCccccCC-----CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006884 492 ----TTATRTIGYRAPEVTET-----RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 492 ----~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
....++..|+|||++.. ..++.++||||||+++|+|++|+.||...... ......... ...
T Consensus 167 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~-~~~--- 236 (275)
T cd06608 167 LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM------RALFKIPRN-PPP--- 236 (275)
T ss_pred hhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH------HHHHHhhcc-CCC---
Confidence 23446788999998753 34678999999999999999999999643211 111111111 000
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
...........+.+++.+||..||++|||++|+++
T Consensus 237 -----~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 237 -----TLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred -----CCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 01111223456778899999999999999999976
No 271
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=9.7e-34 Score=282.71 Aligned_cols=242 Identities=29% Similarity=0.500 Sum_probs=195.5
Q ss_pred hcccCcCCceEEEEEEEcC-----CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILED-----GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||.||++...+ +..||+|.+..... ..+.+..|++++..+ +|+|++++++++.+.+..+++|||
T Consensus 4 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~i~e~ 82 (258)
T smart00219 4 GKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKL-DHPNIVKLLGVCTEEEPLMIVMEY 82 (258)
T ss_pred cceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhc-CCCchheEEEEEcCCCeeEEEEec
Confidence 4679999999999999763 37899999976543 456889999999999 999999999999999999999999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 491 (627)
+++++|.+++..... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.++|+|||.++.....
T Consensus 83 ~~~~~l~~~~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 83 MEGGDLLDYLRKNRP---KELSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLSRDLYDD 156 (258)
T ss_pred cCCCCHHHHHHhhhh---ccCCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCceecccc
Confidence 999999999976432 12899999999999999999999998 999999999999999999999999999776433
Q ss_pred CC-----CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchh
Q 006884 492 TT-----ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVE 565 (627)
Q Consensus 492 ~~-----~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 565 (627)
.. ..++..|+|||...+..++.++||||+|+++|||++ |+.||..... ........... ...
T Consensus 157 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~------~~~~~~~~~~~-~~~----- 224 (258)
T smart00219 157 DYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN------EEVLEYLKKGY-RLP----- 224 (258)
T ss_pred cccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHhcCC-CCC-----
Confidence 11 225678999999988889999999999999999998 7888865321 11111111111 000
Q ss_pred hhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006884 566 LLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMI 604 (627)
Q Consensus 566 l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L 604 (627)
........+.+++.+|+..+|++|||+.|+++.|
T Consensus 225 -----~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 225 -----KPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -----CCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 0111334677888999999999999999998764
No 272
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-35 Score=300.92 Aligned_cols=243 Identities=20% Similarity=0.339 Sum_probs=194.8
Q ss_pred HHhcccCcCCceEEEEEEEcCCcE-EEEEEeccc-ccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 337 ASAEVLGKGSYGSTYKAILEDGTT-VVVKRLREV-AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 337 ~~~~~lg~G~~g~Vy~~~~~~~~~-vavK~~~~~-~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+...||.|+||.||++..++... .|.|++... ....++|.-|++++... .||+|+++++.|+..+.++++.|||.|
T Consensus 35 eIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~C-dHP~ivkLl~ayy~enkLwiliEFC~G 113 (1187)
T KOG0579|consen 35 EIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAEC-DHPVIVKLLSAYYFENKLWILIEFCGG 113 (1187)
T ss_pred HHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcC-CChHHHHHHHHHhccCceEEEEeecCC
Confidence 445679999999999999775443 455665432 23456788999999999 899999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc----CC
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI----NF 490 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~----~~ 490 (627)
|-....+-.. +..+...++.-+++|++.||.|||++. |||||||+.|||++-+|.++++|||.+... ..
T Consensus 114 GAVDaimlEL----~r~LtE~QIqvvc~q~ldALn~LHs~~---iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qk 186 (1187)
T KOG0579|consen 114 GAVDAIMLEL----GRVLTEDQIQVVCYQVLDALNWLHSQN---IIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQK 186 (1187)
T ss_pred chHhHHHHHh----ccccchHHHHHHHHHHHHHHHHHhhcc---hhhhhccccceEEEecCcEeeecccccccchhHHhh
Confidence 9998887655 457999999999999999999999998 999999999999999999999999998543 34
Q ss_pred CCCCCCCccccCccccC-----CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchh
Q 006884 491 PTTATRTIGYRAPEVTE-----TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVE 565 (627)
Q Consensus 491 ~~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 565 (627)
..++.|||.|||||+.. ..+|+.++||||||++|.||..+.+|-...+. + +-+-.+ .... .+.
T Consensus 187 RDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp-----M-RVllKi-aKSe-----PPT 254 (1187)
T KOG0579|consen 187 RDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP-----M-RVLLKI-AKSE-----PPT 254 (1187)
T ss_pred hccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch-----H-HHHHHH-hhcC-----CCc
Confidence 57788999999999874 46899999999999999999999998654321 1 111111 1111 111
Q ss_pred hhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 566 LLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 566 l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
+. ........|.+++.+|+.++|..||++.++++
T Consensus 255 Ll---qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 255 LL---QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred cc---CcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 22 23445567778888999999999999999876
No 273
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-34 Score=316.86 Aligned_cols=253 Identities=27% Similarity=0.391 Sum_probs=205.0
Q ss_pred HHhcccCcCCceEEEEEEEc----C----CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCcee
Q 006884 337 ASAEVLGKGSYGSTYKAILE----D----GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKL 406 (627)
Q Consensus 337 ~~~~~lg~G~~g~Vy~~~~~----~----~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~ 406 (627)
+..+.||+|+||.|++|... . ...||||.++.... ..+.+..|+++|..+++|+||+.++|+|..++..+
T Consensus 299 ~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~ 378 (609)
T KOG0200|consen 299 KLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLY 378 (609)
T ss_pred cccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceE
Confidence 44569999999999999843 1 45799999987644 46789999999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHhhhcC---------CCCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC
Q 006884 407 VVYSYMPAGSLFMLLHRNR---------SDGG--TALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL 475 (627)
Q Consensus 407 lv~e~~~~gsL~~~l~~~~---------~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~ 475 (627)
+|+||+..|+|.++++..+ .... ..+.....+.++.|||.|++||++.. +|||||.++|||+.++.
T Consensus 379 ~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~---~vHRDLAaRNVLi~~~~ 455 (609)
T KOG0200|consen 379 VIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP---CVHRDLAARNVLITKNK 455 (609)
T ss_pred EEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC---ccchhhhhhhEEecCCC
Confidence 9999999999999999876 1111 23888999999999999999999987 99999999999999999
Q ss_pred CeEEeecccccccCCCCCC-----C--CCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHH
Q 006884 476 NGCISDVGLAHLINFPTTA-----T--RTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPR 547 (627)
Q Consensus 476 ~~ki~DfG~a~~~~~~~~~-----~--~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~ 547 (627)
.+||+|||+|+........ . -...|||||.+....|+.++|||||||+|||++| |..||.+... ...
T Consensus 456 ~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~-----~~~ 530 (609)
T KOG0200|consen 456 VIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP-----TEE 530 (609)
T ss_pred EEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc-----HHH
Confidence 9999999999975443221 1 1346999999999999999999999999999999 8899875211 111
Q ss_pred HHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhc
Q 006884 548 WVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQ 608 (627)
Q Consensus 548 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~ 608 (627)
. ...++++... .....+..++.++|+.||+.+|++||++.++.+.++...
T Consensus 531 l-~~~l~~G~r~----------~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 531 L-LEFLKEGNRM----------EQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred H-HHHHhcCCCC----------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 1 1123332211 112334567889999999999999999999999999853
No 274
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.1e-33 Score=287.51 Aligned_cols=253 Identities=24% Similarity=0.320 Sum_probs=194.7
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeC--CceeEEEecCCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSK--DEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~--~~~~lv~e~~~~ 414 (627)
+.||.|++|.||++... +++.+|+|.+..... ...++.+|+++++++ +||||+++++++... ...++||||+++
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 85 (287)
T cd06621 7 SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSC-KSPYIVKYYGAFLDESSSSIGIAMEYCEG 85 (287)
T ss_pred EEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhC-CCCCeeeeeeEEEccCCCeEEEEEEecCC
Confidence 67999999999999975 578899998865432 356789999999999 899999999998654 367899999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--C
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--T 492 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--~ 492 (627)
++|.+++..... ....+++.....++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... .
T Consensus 86 ~~L~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~ 161 (287)
T cd06621 86 GSLDSIYKKVKK-RGGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAG 161 (287)
T ss_pred CCHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeeccccccccccccc
Confidence 999998765322 2345788999999999999999999998 999999999999999999999999998765332 2
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
...++..|+|||.+.+..++.++||||||+++|+|++|+.||....... ....+......... ... +.... ...
T Consensus 162 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~-~~~-~~~~~---~~~ 235 (287)
T cd06621 162 TFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPP-LGPIELLSYIVNMP-NPE-LKDEP---GNG 235 (287)
T ss_pred cccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCC-CChHHHHHHHhcCC-chh-hccCC---CCC
Confidence 3346778999999998899999999999999999999999998653211 11111111111100 000 00000 000
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
......+.+++.+||+.+|++|||+.|++++
T Consensus 236 ~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 236 IKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred CchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 1123457789999999999999999999883
No 275
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1e-33 Score=282.62 Aligned_cols=241 Identities=22% Similarity=0.404 Sum_probs=196.0
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||++... +++.||+|.+.... ...+++.+|+++++.+ +|+||+++.+++...+..++|+||+++
T Consensus 5 ~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd08218 5 VKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNM-KHPNIVQYQESFEENGNLYIVMDYCEG 83 (256)
T ss_pred EEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhC-CCCCeeeeEeeecCCCeEEEEEecCCC
Confidence 468999999999999954 68899999986432 2345788999999999 999999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC--
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-- 492 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~-- 492 (627)
++|.+++.... ...+++....+++.|++.|+.|||+.+ ++|+||+|+||+++.++.++|+|||.+.......
T Consensus 84 ~~l~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~ 157 (256)
T cd08218 84 GDLYKKINAQR---GVLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVEL 157 (256)
T ss_pred CcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccceeecCcchhh
Confidence 99999987542 235789999999999999999999988 9999999999999999999999999997664322
Q ss_pred --CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 493 --TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 493 --~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
...+++.|+|||+..+..++.++||||||+++++|++|+.||.... ....+..........
T Consensus 158 ~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~------~~~~~~~~~~~~~~~----------- 220 (256)
T cd08218 158 ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN------MKNLVLKIIRGSYPP----------- 220 (256)
T ss_pred hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC------HHHHHHHHhcCCCCC-----------
Confidence 2346788999999998889999999999999999999999986432 222222222211100
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
........+.+++.+||+.+|++||++.||+++
T Consensus 221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 221 VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred CcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 011223457788899999999999999999874
No 276
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=3.8e-34 Score=286.42 Aligned_cols=241 Identities=20% Similarity=0.250 Sum_probs=188.3
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
+.||+|+||.||+|... +++.||+|.+..... ....+..|..++....+|+|++++++++..++..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46999999999999965 588999999865321 1233455555555545899999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCCC
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTA 494 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~~ 494 (627)
++|.+++... ..+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.+||+|||+++........
T Consensus 82 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 153 (260)
T cd05611 82 GDCASLIKTL-----GGLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKF 153 (260)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccceeccccccC
Confidence 9999999754 25888999999999999999999998 999999999999999999999999998876555556
Q ss_pred CCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHH
Q 006884 495 TRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEE 574 (627)
Q Consensus 495 ~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 574 (627)
.++..|+|||...+..++.++||||||+++|||++|..||...... ............ ... .....
T Consensus 154 ~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~~---~~~-----~~~~~ 219 (260)
T cd05611 154 VGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD------AVFDNILSRRIN---WPE-----EVKEF 219 (260)
T ss_pred CCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHHhcccC---CCC-----ccccc
Confidence 6788999999998888899999999999999999999999753221 111111111000 000 00112
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 575 EMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 575 ~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
....+.+++.+||+.+|++||++.++.+
T Consensus 220 ~~~~~~~~i~~~l~~~p~~R~~~~~~~~ 247 (260)
T cd05611 220 CSPEAVDLINRLLCMDPAKRLGANGYQE 247 (260)
T ss_pred CCHHHHHHHHHHccCCHHHccCCCcHHH
Confidence 2346778889999999999997765544
No 277
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-34 Score=293.44 Aligned_cols=242 Identities=21% Similarity=0.368 Sum_probs=191.9
Q ss_pred HHhcccCcCCceEEEEEEEcCCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 337 ASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 337 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
...++||+||.+.||++...+.+.||+|++..... ....|..|++.+.+|..|.+|+.+++|-..++..|+||||=
T Consensus 364 eilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~G- 442 (677)
T KOG0596|consen 364 EILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECG- 442 (677)
T ss_pred hHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeecc-
Confidence 44688999999999999988889999998765432 45679999999999999999999999999999999999986
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCC
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTT 493 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~ 493 (627)
..+|..+|++... ....| .+..+..|++.++.++|++| |||.||||.|+|+- .|.+||+|||+|..+...++
T Consensus 443 d~DL~kiL~k~~~---~~~~~-~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTT 514 (677)
T KOG0596|consen 443 DIDLNKILKKKKS---IDPDW-FLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTT 514 (677)
T ss_pred cccHHHHHHhccC---CCchH-HHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEEE-eeeEEeeeechhcccCcccc
Confidence 4599999986532 23345 77889999999999999999 99999999999995 47899999999998876543
Q ss_pred ------CCCCccccCccccCCCC-----------CCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhc
Q 006884 494 ------ATRTIGYRAPEVTETRK-----------ASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREE 556 (627)
Q Consensus 494 ------~~~t~~y~aPE~~~~~~-----------~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 556 (627)
.+||+.||+||.+.... ..+++||||+|||||+|+.|+.||... ......
T Consensus 515 sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~--------~n~~aK----- 581 (677)
T KOG0596|consen 515 SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI--------INQIAK----- 581 (677)
T ss_pred ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH--------HHHHHH-----
Confidence 46899999999885432 457899999999999999999999732 211111
Q ss_pred ccccccchhh-hcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 557 WTAEVFDVEL-LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 557 ~~~~~~d~~l-~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
...+.|+.. ..++..++. .+++++++.||..||.+|||..++++
T Consensus 582 -l~aI~~P~~~Iefp~~~~~-~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 582 -LHAITDPNHEIEFPDIPEN-DELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred -HHhhcCCCccccccCCCCc-hHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 112222211 112221111 12888999999999999999999987
No 278
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1.7e-33 Score=282.81 Aligned_cols=235 Identities=20% Similarity=0.292 Sum_probs=185.6
Q ss_pred cCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHHHH
Q 006884 342 LGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFML 420 (627)
Q Consensus 342 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 420 (627)
||+|+||.||+++.+ ++..+|+|.+........ |+.....+.+|+|++++++.+...+..++||||+++|+|.++
T Consensus 24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~----e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~ 99 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI----EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDL 99 (267)
T ss_pred ecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh----hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHH
Confidence 699999999999965 678899998764322211 222222233799999999999999999999999999999999
Q ss_pred hhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC-CeEEeecccccccCCCCCCCCCcc
Q 006884 421 LHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL-NGCISDVGLAHLINFPTTATRTIG 499 (627)
Q Consensus 421 l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~-~~ki~DfG~a~~~~~~~~~~~t~~ 499 (627)
+... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++ .++|+|||+++.........++..
T Consensus 100 l~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 171 (267)
T PHA03390 100 LKKE-----GKLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSCYDGTLD 171 (267)
T ss_pred HHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCCeEEEecCccceecCCCccCCCCCc
Confidence 9754 26899999999999999999999998 99999999999999998 999999999987766666678899
Q ss_pred ccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHH
Q 006884 500 YRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQM 579 (627)
Q Consensus 500 y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l 579 (627)
|+|||++.+..++.++||||||+++|||++|+.||......+ .....+.... .. .. .........+
T Consensus 172 y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~-~~----~~--------~~~~~~~~~~ 237 (267)
T PHA03390 172 YFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE-LDLESLLKRQ-QK----KL--------PFIKNVSKNA 237 (267)
T ss_pred ccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch-hhHHHHHHhh-cc----cC--------CcccccCHHH
Confidence 999999998899999999999999999999999998443221 2222222111 00 00 0111233456
Q ss_pred HHHHHHcccCCCCCCCC-HHHHHH
Q 006884 580 LQIALSCVAKVPDSRPK-MDDVVR 602 (627)
Q Consensus 580 ~~l~~~Cl~~~P~~RPs-~~ev~~ 602 (627)
.+++.+|++.+|.+||+ ++|+++
T Consensus 238 ~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 238 NDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred HHHHHHHhccChhhCCchHHHHhc
Confidence 77888999999999996 588874
No 279
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=4.3e-34 Score=289.94 Aligned_cols=251 Identities=21% Similarity=0.316 Sum_probs=188.3
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||+|+.. +|+.||+|+++... .....+.+|++++..+ +|+|++++++++.+....++|+||++
T Consensus 5 ~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~- 82 (284)
T cd07839 5 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLYDVLHSDKKLTLVFEYCD- 82 (284)
T ss_pred EEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhc-CCCCeeeHHHHhccCCceEEEEecCC-
Confidence 367999999999999975 68899999986432 2235678899999999 99999999999999999999999997
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
++|.+++.... ..+++..+..++.|+++||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 83 ~~l~~~~~~~~----~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~ 155 (284)
T cd07839 83 QDLKKYFDSCN----GDIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRC 155 (284)
T ss_pred CCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchhhccCCCCCC
Confidence 57888776432 35899999999999999999999998 999999999999999999999999998765432
Q ss_pred -CCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhc-------c--ccc
Q 006884 492 -TTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREE-------W--TAE 560 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~-------~--~~~ 560 (627)
....++..|+|||++.+. .++.++|||||||++|||++|+.|+...... ......+.... + ...
T Consensus 156 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07839 156 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV-----DDQLKRIFRLLGTPTEESWPGVSK 230 (284)
T ss_pred cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCH-----HHHHHHHHHHhCCCChHHhHHhhh
Confidence 123467889999998664 4789999999999999999999886432211 11111111000 0 000
Q ss_pred ccch-hhhcC-------CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 561 VFDV-ELLKY-------QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 561 ~~d~-~l~~~-------~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
..+. ..... ...+....++.+++.+||+.+|.+|||+++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 231 LPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred cccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 0000 00000 0001122456678899999999999999999763
No 280
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-34 Score=287.62 Aligned_cols=239 Identities=18% Similarity=0.320 Sum_probs=199.9
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|.|+.|-++++- .|..||||++.+... ....+.+|+.-|+.+ +|||||+++.........|+|.|.-++
T Consensus 23 ekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLV-QHpNiVRLYEViDTQTKlyLiLELGD~ 101 (864)
T KOG4717|consen 23 EKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLV-QHPNIVRLYEVIDTQTKLYLILELGDG 101 (864)
T ss_pred hhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHh-cCcCeeeeeehhcccceEEEEEEecCC
Confidence 366999999999999843 699999999976643 456788999999999 999999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe-cCCCCeEEeecccccccCCC--
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL-TQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl-~~~~~~ki~DfG~a~~~~~~-- 491 (627)
|+|++|+-++. ..+.+..+.+++.||+.|+.|+|+.+ +|||||||+||.+ .+-|.+|+.|||++..+.+.
T Consensus 102 GDl~DyImKHe----~Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~k 174 (864)
T KOG4717|consen 102 GDLFDYIMKHE----EGLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKK 174 (864)
T ss_pred chHHHHHHhhh----ccccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccCCCcch
Confidence 99999998764 46899999999999999999999988 9999999999987 45789999999999877654
Q ss_pred -CCCCCCccccCccccCCCCCC-CcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 492 -TTATRTIGYRAPEVTETRKAS-QKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~~~-~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
.+.+|+..|-|||++.+..|+ +.+||||+|||||-|+.|+.||+..+..+... .++|-.....
T Consensus 175 L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLT---------------mImDCKYtvP 239 (864)
T KOG4717|consen 175 LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLT---------------MIMDCKYTVP 239 (864)
T ss_pred hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhh---------------hhhcccccCc
Confidence 467799999999999999996 67999999999999999999999876544322 1223222222
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.....+..++|.+|+..||.+|.+.+||+..
T Consensus 240 ---shvS~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 240 ---SHVSKECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred ---hhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 2223345567779999999999999999763
No 281
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.1e-33 Score=287.37 Aligned_cols=241 Identities=25% Similarity=0.411 Sum_probs=196.2
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHH
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 418 (627)
+.||+|++|.||++..+ ++..|++|++.......+.+..|++.+..+ +|+|++++++.+...+..++++||+++++|.
T Consensus 25 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 103 (286)
T cd06614 25 EKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDC-KHPNIVDYYDSYLVGDELWVVMEYMDGGSLT 103 (286)
T ss_pred HhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHC-CCCCeeEEEEEEEECCEEEEEEeccCCCcHH
Confidence 67999999999999976 688999999876544567789999999999 9999999999999999999999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----CCC
Q 006884 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TTA 494 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~----~~~ 494 (627)
+++.... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+...... ...
T Consensus 104 ~~l~~~~----~~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 176 (286)
T cd06614 104 DIITQNF----VRMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSV 176 (286)
T ss_pred HHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhccc
Confidence 9998653 36899999999999999999999988 999999999999999999999999988655332 223
Q ss_pred CCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHH
Q 006884 495 TRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEE 574 (627)
Q Consensus 495 ~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 574 (627)
.++..|+|||++.+..++.++||||||+++|+|++|+.||...... .......... ... ......
T Consensus 177 ~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~------~~~~~~~~~~-~~~--------~~~~~~ 241 (286)
T cd06614 177 VGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL------RALFLITTKG-IPP--------LKNPEK 241 (286)
T ss_pred cCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhcC-CCC--------Ccchhh
Confidence 4678899999998888999999999999999999999998643211 1111111111 000 011111
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 575 EMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 575 ~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
....+.+++.+|++.+|.+||++.+++++
T Consensus 242 ~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 242 WSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 23456778899999999999999999863
No 282
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.5e-33 Score=287.69 Aligned_cols=255 Identities=21% Similarity=0.310 Sum_probs=190.6
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCCc-----eeEEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDE-----KLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~-----~~lv~ 409 (627)
.+.||+|+||.||+|... +++.||+|++..... ....+.+|++++..+.+|+||+++++++...+. .++||
T Consensus 6 ~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~ 85 (295)
T cd07837 6 LEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVF 85 (295)
T ss_pred eeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEe
Confidence 367999999999999965 688999998765422 235788899999999778999999999887665 79999
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC-CCCeEEeeccccccc
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ-DLNGCISDVGLAHLI 488 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~-~~~~ki~DfG~a~~~ 488 (627)
||+++ +|.+++..........+++..+..++.|++.||.|||+.+ |+||||||+||+++. ++.+||+|||+++..
T Consensus 86 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~ 161 (295)
T cd07837 86 EYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDKQKGLLKIADLGLGRAF 161 (295)
T ss_pred eccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEecCCCeEEEeecccceec
Confidence 99985 8988887654332456899999999999999999999998 999999999999998 899999999998765
Q ss_pred CCC----CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhc--ccccc
Q 006884 489 NFP----TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREE--WTAEV 561 (627)
Q Consensus 489 ~~~----~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 561 (627)
... ....+++.|+|||++.+ ..++.++||||||+++|||++|+.||..... ......+.... .....
T Consensus 162 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 235 (295)
T cd07837 162 SIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSE------LQQLLHIFKLLGTPTEQV 235 (295)
T ss_pred CCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCH------HHHHHHHHHHhCCCChhh
Confidence 322 12245778999998865 4578999999999999999999999975321 11111111100 00000
Q ss_pred c----ch-h---hhcC--C----ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 562 F----DV-E---LLKY--Q----DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 562 ~----d~-~---l~~~--~----~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
. .. . .... . ..+....++.+++.+||..+|.+||++.|++.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 236 WPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred CcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0 00 0 0000 0 001223457788999999999999999999753
No 283
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=9.9e-34 Score=286.52 Aligned_cols=240 Identities=20% Similarity=0.288 Sum_probs=184.1
Q ss_pred ccCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHh--ccCCceeceeeEEeeCCceeEEEecCC
Q 006884 341 VLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTI--GKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 341 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l--~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.||+|+||.||++... +++.+|+|.+..... ....+..|..++..+ ..|+|++.+.+++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999965 588999998865421 123344444333333 279999999999998899999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~L~~~i~~~-----~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~ 152 (279)
T cd05633 81 GGDLHYHLSQH-----GVFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP 152 (279)
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCcceeccccCc
Confidence 99999998754 35899999999999999999999998 999999999999999999999999998755332
Q ss_pred CCCCCCccccCccccC-CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 492 TTATRTIGYRAPEVTE-TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~-~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
....++..|+|||.+. +..++.++|||||||++|||++|+.||........ ......... ....+
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~----~~~~~~~~~------~~~~~---- 218 (279)
T cd05633 153 HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK----HEIDRMTLT------VNVEL---- 218 (279)
T ss_pred cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH----HHHHHHhhc------CCcCC----
Confidence 2345788999999986 45689999999999999999999999975432211 111111100 00000
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRP-----KMDDVVRM 603 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~ev~~~ 603 (627)
......++.+++.+|+..+|++|| +++|++++
T Consensus 219 -~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 219 -PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred -ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 111233566788899999999999 59988875
No 284
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.1e-33 Score=283.88 Aligned_cols=246 Identities=22% Similarity=0.350 Sum_probs=197.1
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||++..+ +++.+|+|.+.... ...+++.+|+++++++ +||||+++++.+......++++||++++
T Consensus 6 ~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (265)
T cd06605 6 LGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKC-NSPYIVGFYGAFYNNGDISICMEYMDGG 84 (265)
T ss_pred HHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHC-CCCchhhhheeeecCCEEEEEEEecCCC
Confidence 467999999999999976 68899999887543 2346788999999999 7999999999999999999999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--C
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS-EGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--T 492 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--~ 492 (627)
+|.+++.... ..+++....+++.|++.|+.|||+ .+ ++|+||||+||+++.++.++|+|||.+...... .
T Consensus 85 ~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~ 157 (265)
T cd06605 85 SLDKILKEVQ----GRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAK 157 (265)
T ss_pred cHHHHHHHcc----CCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeecccchhhHHHHhh
Confidence 9999998643 468889999999999999999999 77 999999999999999999999999998765322 2
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
...++..|+|||++.+..++.++||||||+++|+|++|+.||...... ................. .. ..
T Consensus 158 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~-~~---------~~ 226 (265)
T cd06605 158 TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDP-PDGIFELLQYIVNEPPP-RL---------PS 226 (265)
T ss_pred cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccc-cccHHHHHHHHhcCCCC-CC---------Ch
Confidence 255778899999999989999999999999999999999999754321 11222222222211110 00 00
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
......+.+++.+||..+|++|||+.+++.+
T Consensus 227 ~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 227 GKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred hhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 1133457788889999999999999999863
No 285
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.2e-33 Score=316.06 Aligned_cols=251 Identities=17% Similarity=0.316 Sum_probs=191.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeC--CceeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSK--DEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~--~~~~lv~e~~ 412 (627)
.+.||+|+||+||++... ++..||+|.+.... .....+..|+.++..+ +||||++++++|... ...++||||+
T Consensus 18 l~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L-~HPNIVrl~d~f~de~~~~lyIVMEY~ 96 (1021)
T PTZ00266 18 IKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMREL-KHKNIVRYIDRFLNKANQKLYILMEFC 96 (1021)
T ss_pred EEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHc-CCCCcCeEEEEEEecCCCEEEEEEeCC
Confidence 478999999999999965 56788999886432 2345688999999999 999999999988654 4688999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC----CCeeecCCCCCCeEecC---------------
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG----AKFTHGNIKSSNVLLTQ--------------- 473 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~----~~ivH~Dlkp~NILl~~--------------- 473 (627)
++|+|.+++..... ....+++..++.|+.||+.||.|||+.+. .+||||||||+|||++.
T Consensus 97 ~gGSL~~lL~k~~~-~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ 175 (1021)
T PTZ00266 97 DAGDLSRNIQKCYK-MFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNL 175 (1021)
T ss_pred CCCcHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccccccccc
Confidence 99999999975422 12468999999999999999999998542 24999999999999964
Q ss_pred --CCCeEEeecccccccCCC---CCCCCCccccCccccCC--CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHH
Q 006884 474 --DLNGCISDVGLAHLINFP---TTATRTIGYRAPEVTET--RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLP 546 (627)
Q Consensus 474 --~~~~ki~DfG~a~~~~~~---~~~~~t~~y~aPE~~~~--~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~ 546 (627)
...+||+|||++...... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.... ...
T Consensus 176 ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~-----~~~ 250 (1021)
T PTZ00266 176 NGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN-----NFS 250 (1021)
T ss_pred CCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC-----cHH
Confidence 345899999999876432 23458999999999854 458899999999999999999999997432 111
Q ss_pred HHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHhhc
Q 006884 547 RWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR--MIEQIQ 608 (627)
Q Consensus 547 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~--~L~~~~ 608 (627)
..+.. +.... + + . ......++.+++..||..+|.+||++.|++. .+..+.
T Consensus 251 qli~~-lk~~p-----~--l-p---i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~ 302 (1021)
T PTZ00266 251 QLISE-LKRGP-----D--L-P---IKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVG 302 (1021)
T ss_pred HHHHH-HhcCC-----C--C-C---cCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcC
Confidence 21111 11110 0 0 0 0112245678889999999999999999985 444443
No 286
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=9.6e-34 Score=282.84 Aligned_cols=239 Identities=23% Similarity=0.357 Sum_probs=192.2
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc------CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA------TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||.||+|..+ ++..|++|.+..... ..+.+.+|++++..+ +|+|++++++++......++++||
T Consensus 5 ~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~ 83 (258)
T cd06632 5 GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKL-QHPNIVQYLGTEREEDNLYIFLEL 83 (258)
T ss_pred cceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhc-CCCCchheeeeEecCCeEEEEEEe
Confidence 367999999999999976 789999998864321 335788899999999 999999999999999999999999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 491 (627)
+++++|.+++... ..+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.++.+||+|||.+......
T Consensus 84 ~~~~~L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~ 155 (258)
T cd06632 84 VPGGSLAKLLKKY-----GSFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMAKQVVEF 155 (258)
T ss_pred cCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccceecccc
Confidence 9999999999754 24889999999999999999999998 999999999999999999999999998765432
Q ss_pred ---CCCCCCccccCccccCCCC-CCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006884 492 ---TTATRTIGYRAPEVTETRK-ASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 492 ---~~~~~t~~y~aPE~~~~~~-~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
....++..|+|||.+.... ++.++|+||||+++|+|++|+.||..... ............... +
T Consensus 156 ~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~------~~~~~~~~~~~~~~~-~----- 223 (258)
T cd06632 156 SFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG------VAAVFKIGRSKELPP-I----- 223 (258)
T ss_pred ccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH------HHHHHHHHhcccCCC-c-----
Confidence 2344678899999987766 89999999999999999999999975321 111111111000000 0
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.......+.+++.+||+.+|++||++.++++
T Consensus 224 ----~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 224 ----PDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred ----CCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 0112245567888999999999999999975
No 287
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.4e-33 Score=290.80 Aligned_cols=245 Identities=24% Similarity=0.358 Sum_probs=195.2
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+++.. ++..||+|++..... ....+..|+++++.+ +|+|++++++++..++..++|+||++
T Consensus 30 ~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 108 (317)
T cd06635 30 LREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRI-KHPNSIEYKGCYLREHTAWLVMEYCL 108 (317)
T ss_pred hheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeeCCeEEEEEeCCC
Confidence 467999999999999965 688999999864321 234688899999999 89999999999999999999999996
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCC
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTT 493 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~ 493 (627)
|++.+++... ...+++..+..++.|++.|+.|||+.+ ++||||+|+||+++.++.+||+|||++........
T Consensus 109 -g~l~~~~~~~----~~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (317)
T cd06635 109 -GSASDLLEVH----KKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASIASPANS 180 (317)
T ss_pred -CCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCccccCCccc
Confidence 4787777543 235899999999999999999999998 99999999999999999999999999887766566
Q ss_pred CCCCccccCccccC---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 494 ATRTIGYRAPEVTE---TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 494 ~~~t~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
..++..|+|||++. ...++.++||||||+++|||++|+.||...... .....+....... .
T Consensus 181 ~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~------~~~~~~~~~~~~~----------~ 244 (317)
T cd06635 181 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM------SALYHIAQNESPT----------L 244 (317)
T ss_pred ccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH------HHHHHHHhccCCC----------C
Confidence 67888999999973 456889999999999999999999998653211 1111111111100 0
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhc
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQ 608 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~ 608 (627)
........+.+++.+|++.+|.+||++.++++++..+.
T Consensus 245 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 245 QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred CCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence 11122345678888999999999999999998765543
No 288
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=9.3e-34 Score=290.64 Aligned_cols=244 Identities=18% Similarity=0.257 Sum_probs=190.9
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||++..+ .++.|++|.+.... ...+.+.+|++++..+ +||||+++++.+..++..++||||++
T Consensus 6 ~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~ 84 (305)
T cd05609 6 IKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFA-ENPFVVSMFCSFETKRHLCMVMEYVE 84 (305)
T ss_pred eeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhC-CCCCeeeeEEEEecCCEEEEEEecCC
Confidence 367999999999999965 57899999886542 1235677899999998 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+++|.+++... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 85 g~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~ 156 (305)
T cd05609 85 GGDCATLLKNI-----GALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLT 156 (305)
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCccccCcCcc
Confidence 99999999754 35899999999999999999999998 999999999999999999999999998642110
Q ss_pred -----------------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhh
Q 006884 492 -----------------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVR 554 (627)
Q Consensus 492 -----------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 554 (627)
....++..|+|||.+....++.++||||||+++|||++|+.||.+... .+.......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~------~~~~~~~~~ 230 (305)
T cd05609 157 TNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP------EELFGQVIS 230 (305)
T ss_pred ccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHh
Confidence 112356789999999888899999999999999999999999974321 111221111
Q ss_pred hcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 006884 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQ 606 (627)
Q Consensus 555 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~ 606 (627)
.... .+. ........+.+++.+||+.+|++||++.++.+.|+.
T Consensus 231 ~~~~----~~~-----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 231 DDIE----WPE-----GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred cccC----CCC-----ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 1100 000 001123356788889999999999996655555544
No 289
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=5e-34 Score=289.73 Aligned_cols=253 Identities=25% Similarity=0.366 Sum_probs=190.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||+|..+ +++.||+|++..... ..+.+.+|++++..+ +||||+++++++..++..++|+||+++
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 84 (286)
T cd07846 6 LGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQL-RHENLVNLIEVFRRKKRLYLVFEFVDH 84 (286)
T ss_pred eeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhc-CCcchhhHHHhcccCCeEEEEEecCCc
Confidence 367999999999999976 588999998865422 245688899999999 999999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC--
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-- 492 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~-- 492 (627)
++|..+.... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 85 ~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~ 156 (286)
T cd07846 85 TVLDDLEKYP-----NGLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV 156 (286)
T ss_pred cHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccc
Confidence 9988876542 24899999999999999999999998 9999999999999999999999999987654322
Q ss_pred --CCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhc--cccccc-----
Q 006884 493 --TATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREE--WTAEVF----- 562 (627)
Q Consensus 493 --~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----- 562 (627)
...++..|+|||+..+ ..++.++||||||+++|||++|+.||......+ ...........- .....+
T Consensus 157 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07846 157 YTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDID---QLYHIIKCLGNLIPRHQEIFQKNPL 233 (286)
T ss_pred cCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHH---HHHHHHHHhCCCchhhHHHhccchH
Confidence 2346778999999865 457889999999999999999999986432110 000000000000 000000
Q ss_pred -----chhhhcCC----ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 563 -----DVELLKYQ----DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 563 -----d~~l~~~~----~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.+...... ..+.....+.+++.+||+.+|++||++.++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 234 FAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred hhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 00000000 001223467789999999999999999999763
No 290
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.3e-33 Score=283.52 Aligned_cols=247 Identities=25% Similarity=0.379 Sum_probs=195.5
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||.|+||+||+|... ++..+++|++.... ...+.+.+|++.++.+ +|+|++++++.+...+..++|+||++++
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv~e~~~~~ 84 (267)
T cd06610 6 IEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQC-NHPNVVKYYTSFVVGDELWLVMPYLSGG 84 (267)
T ss_pred eeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhc-CCCCEEEEEEEEeeCCEEEEEEeccCCC
Confidence 467999999999999954 67899999986432 2456789999999998 9999999999999999999999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC---
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT--- 492 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~--- 492 (627)
+|.+++..... ...+++.....++.|++.|+.|||+.+ ++||||+|+||++++++.++|+|||++.......
T Consensus 85 ~l~~~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~ 159 (267)
T cd06610 85 SLLDIMKSSYP--RGGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRT 159 (267)
T ss_pred cHHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchHHHhccCcccc
Confidence 99999976422 235899999999999999999999998 9999999999999999999999999987654322
Q ss_pred -----CCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhh
Q 006884 493 -----TATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVEL 566 (627)
Q Consensus 493 -----~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 566 (627)
...++..|+|||++... .++.++|+||||+++|||++|+.||....... ........... ..
T Consensus 160 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~------~~~~~~~~~~~------~~ 227 (267)
T cd06610 160 RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK------VLMLTLQNDPP------SL 227 (267)
T ss_pred ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh------hHHHHhcCCCC------Cc
Confidence 22467889999998776 78999999999999999999999997543211 11111111100 01
Q ss_pred hcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 567 LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 567 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
............+.+++.+|+..+|++||++++++++
T Consensus 228 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 228 ETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred CCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 0111111233456788889999999999999999863
No 291
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=9.8e-34 Score=289.44 Aligned_cols=254 Identities=21% Similarity=0.317 Sum_probs=191.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccC------HHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAAT------KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||.||+|... +++.||||.+...... ...+..|++++..+ +|+||+++++++.+.+..++||||
T Consensus 5 ~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~ 83 (298)
T cd07841 5 GKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQEL-KHPNIIGLLDVFGHKSNINLVFEF 83 (298)
T ss_pred eeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhc-CCCCChhhhheeecCCEEEEEEcc
Confidence 357999999999999965 6899999998754322 34567899999999 899999999999999999999999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 491 (627)
+ +|+|.+++.... ..+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||+++.....
T Consensus 84 ~-~~~L~~~i~~~~----~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 155 (298)
T cd07841 84 M-ETDLEKVIKDKS----IVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFGSP 155 (298)
T ss_pred c-CCCHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceeeeeccCC
Confidence 9 999999997542 35899999999999999999999998 999999999999999999999999999876433
Q ss_pred C----CCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHh---hhcc-----c
Q 006884 492 T----TATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVV---REEW-----T 558 (627)
Q Consensus 492 ~----~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~---~~~~-----~ 558 (627)
. ...++..|+|||.+.+ ..++.++||||||+++|||++|..||......+ .+........ ...+ .
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 233 (298)
T cd07841 156 NRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID--QLGKIFEALGTPTEENWPGVTSL 233 (298)
T ss_pred CccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH--HHHHHHHHcCCCchhhhhhcccc
Confidence 1 2235678999998854 467899999999999999999988876432211 1111110000 0000 0
Q ss_pred ccccchhhhcCC----ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 559 AEVFDVELLKYQ----DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 559 ~~~~d~~l~~~~----~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
............ ........+.+++.+||+.+|++|||+.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 234 PDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred cccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 000000000000 011223567789999999999999999999873
No 292
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=2.1e-33 Score=282.05 Aligned_cols=238 Identities=21% Similarity=0.335 Sum_probs=185.0
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc------CHHHHHHHHHHHHHhccCCceeceeeEEeeC--CceeEEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA------TKREFEQQMEVVGTIGKHSNVVPVRAYYYSK--DEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~--~~~~lv~ 409 (627)
.+.||+|+||.||++... ++..|++|++..... ....+.+|++++..+ +||||+++++++... ...++++
T Consensus 7 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~l~~ 85 (266)
T cd06651 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNL-QHERIVQYYGCLRDRAEKTLTIFM 85 (266)
T ss_pred cceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHc-CCCCeeeEEEEEEcCCCCEEEEEE
Confidence 478999999999999965 588999998864321 124578899999999 899999999988753 5678899
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||+++++|.+++... ..+++.....++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 86 e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~ 157 (266)
T cd06651 86 EYMPGGSVKDQLKAY-----GALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQ 157 (266)
T ss_pred eCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCCCccccc
Confidence 999999999999753 24789999999999999999999988 9999999999999999999999999987653
Q ss_pred CC-------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006884 490 FP-------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 490 ~~-------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
.. ....++..|+|||++.+..++.++||||||+++|||++|+.||..... ............
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~------~~~~~~~~~~~~----- 226 (266)
T cd06651 158 TICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA------MAAIFKIATQPT----- 226 (266)
T ss_pred cccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch------HHHHHHHhcCCC-----
Confidence 21 123467889999999988899999999999999999999999975321 111111111110
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.+.+ .......+.+++ +||..+|++||+++||++
T Consensus 227 ~~~~-----~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 227 NPQL-----PSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred CCCC-----chhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 0000 011122334444 688899999999999975
No 293
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.6e-33 Score=283.16 Aligned_cols=242 Identities=21% Similarity=0.359 Sum_probs=192.3
Q ss_pred hcccCcCCceEEEEEEE-cCCcEEEEEEeccccc-------CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVAA-------TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||++.. .+++.||+|.+..... ..+.+.+|+++++++ +|+|++++++++.+.+..++|+|
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~v~e 83 (268)
T cd06630 5 GQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL-NHPHIIRMLGATCEDSHFNLFVE 83 (268)
T ss_pred cceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHc-CCCceehhhceeccCCeEEEEEe
Confidence 36799999999999985 4689999999864321 235788899999999 99999999999999999999999
Q ss_pred cCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC-CeEEeecccccccC
Q 006884 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL-NGCISDVGLAHLIN 489 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~-~~ki~DfG~a~~~~ 489 (627)
|+++++|.+++... ..+++.....++.|++.||.|||+.+ ++|+||+|+||+++.++ .+||+|||.+....
T Consensus 84 ~~~~~~L~~~l~~~-----~~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~ 155 (268)
T cd06630 84 WMAGGSVSHLLSKY-----GAFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAAARLA 155 (268)
T ss_pred ccCCCcHHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEcccccccccc
Confidence 99999999999754 35889999999999999999999998 99999999999998776 58999999987654
Q ss_pred CC--------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccc
Q 006884 490 FP--------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEV 561 (627)
Q Consensus 490 ~~--------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (627)
.. ....++..|+|||++.+..++.++||||+|+++|+|++|+.||....... ..............
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~--- 229 (268)
T cd06630 156 AKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSN---HLALIFKIASATTA--- 229 (268)
T ss_pred cccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcc---hHHHHHHHhccCCC---
Confidence 32 12346778999999988889999999999999999999999996432211 11111111100000
Q ss_pred cchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 562 FDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 562 ~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
..........+.+++.+|+..+|++||++.|+++
T Consensus 230 -------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 230 -------PSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred -------CCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 0111223356778889999999999999999975
No 294
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-35 Score=287.98 Aligned_cols=235 Identities=23% Similarity=0.314 Sum_probs=188.6
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
++||+||||.||-++.+ +|+.+|.|++.+.. ..+.....|-+++.++ ..+.||.+-..|+..+.+++|+..|+|
T Consensus 191 RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV-~s~FiVslaYAfeTkd~LClVLtlMNG 269 (591)
T KOG0986|consen 191 RVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKV-SSPFIVSLAYAFETKDALCLVLTLMNG 269 (591)
T ss_pred EEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHh-ccCcEEEEeeeecCCCceEEEEEeecC
Confidence 67999999999999866 68999999886543 3445577788899999 889999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
|+|.-+|.... ...+++..++..|.+|+.||.+||... ||.||+||+|||+|+.|+++|+|.|+|..+...
T Consensus 270 GDLkfHiyn~g---~~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~ 343 (591)
T KOG0986|consen 270 GDLKFHIYNHG---NPGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPI 343 (591)
T ss_pred CceeEEeeccC---CCCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCCCeEeeccceEEecCCCCcc
Confidence 99999887653 357999999999999999999999998 999999999999999999999999999877543
Q ss_pred CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006884 492 TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
...+||.||||||++..+.|+...|+||+||++|||+.|+.||....+... .+.+.+.+.+. ...-...
T Consensus 344 ~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk---~eEvdrr~~~~--------~~ey~~k 412 (591)
T KOG0986|consen 344 RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVK---REEVDRRTLED--------PEEYSDK 412 (591)
T ss_pred ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhh---HHHHHHHHhcc--------hhhcccc
Confidence 234789999999999999999999999999999999999999975332110 01111111111 0001123
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCC
Q 006884 572 VEEEMVQMLQIALSCVAKVPDSRP 595 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~P~~RP 595 (627)
..++.+.+.+ ..+++||++|-
T Consensus 413 FS~eakslc~---~LL~Kdp~~RL 433 (591)
T KOG0986|consen 413 FSEEAKSLCE---GLLTKDPEKRL 433 (591)
T ss_pred cCHHHHHHHH---HHHccCHHHhc
Confidence 4555665555 55689999885
No 295
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=2e-33 Score=283.98 Aligned_cols=238 Identities=23% Similarity=0.356 Sum_probs=192.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|... ++..||+|.+.... ...+.+.+|++.+.++ +||||+++++++..++..++|+||++++
T Consensus 9 ~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 87 (277)
T cd06641 9 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKDTKLWIIMEYLGGG 87 (277)
T ss_pred heeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhc-CCCCEeEEEEEEEeCCeEEEEEEeCCCC
Confidence 467999999999999864 68899999876432 2345788899999999 9999999999999999999999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC---
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT--- 492 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~--- 492 (627)
+|.+++... .+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 88 ~l~~~i~~~------~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~ 158 (277)
T cd06641 88 SALDLLEPG------PLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR 158 (277)
T ss_pred cHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEECCCCCEEEeecccceecccchhhh
Confidence 999998642 4789999999999999999999998 9999999999999999999999999987654321
Q ss_pred -CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006884 493 -TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 493 -~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
...++..|+|||++.+..++.++||||||+++|+|++|..||...... .....+ ...... .+
T Consensus 159 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~------~~~~~~-~~~~~~-~~--------- 221 (277)
T cd06641 159 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM------KVLFLI-PKNNPP-TL--------- 221 (277)
T ss_pred ccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH------HHHHHH-hcCCCC-CC---------
Confidence 234678899999998888999999999999999999999999643211 111111 111000 00
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.......+.+++.+|++.+|.+||++.+++++
T Consensus 222 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 222 EGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred CcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 01223456778889999999999999999994
No 296
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.9e-33 Score=283.33 Aligned_cols=244 Identities=23% Similarity=0.378 Sum_probs=190.3
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc-----------CHHHHHHHHHHHHHhccCCceeceeeEEeeCCcee
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA-----------TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKL 406 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~ 406 (627)
.+.||+|+||.||+|... +++.||+|.++.... ..+.+.+|++++..+ +|+|++++++++...+..+
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~ 84 (272)
T cd06629 6 GELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL-DHLNIVQYLGFETTEEYLS 84 (272)
T ss_pred cceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhc-CCCCcceEEEEeccCCceE
Confidence 467999999999999854 688999998753211 123577899999999 8999999999999999999
Q ss_pred EEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccc
Q 006884 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH 486 (627)
Q Consensus 407 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 486 (627)
+|+||+++|+|.+++... ..+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||+++
T Consensus 85 lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~~~~~l~d~~~~~ 156 (272)
T cd06629 85 IFLEYVPGGSIGSCLRTY-----GRFEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGISK 156 (272)
T ss_pred EEEecCCCCcHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCCCeEEEeeccccc
Confidence 999999999999999754 35889999999999999999999988 9999999999999999999999999987
Q ss_pred ccCCC------CCCCCCccccCccccCCCC--CCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006884 487 LINFP------TTATRTIGYRAPEVTETRK--ASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 487 ~~~~~------~~~~~t~~y~aPE~~~~~~--~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
..... ....++..|+|||++.... ++.++||||||+++||+++|+.||..... .... ....... .
T Consensus 157 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-----~~~~-~~~~~~~-~ 229 (272)
T cd06629 157 KSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA-----IAAM-FKLGNKR-S 229 (272)
T ss_pred cccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch-----HHHH-HHhhccc-c
Confidence 65322 1234678899999987654 78999999999999999999999863221 1111 1111110 0
Q ss_pred ccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 559 AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 559 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
...++.. ...+....+.+++.+|+..+|++||++++++++
T Consensus 230 ~~~~~~~-----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 230 APPIPPD-----VSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred CCcCCcc-----ccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 1111110 011223467778889999999999999999864
No 297
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.5e-33 Score=287.25 Aligned_cols=240 Identities=24% Similarity=0.351 Sum_probs=193.1
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccc-ccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV-AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
.+.||+|+||.||++... +++.|++|.+... ....+.+..|+.++..+ +|||++++++.+...+..++|+||+++++
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~lv~e~~~~~~ 102 (293)
T cd06647 24 FEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMREN-KHPNIVNYLDSYLVGDELWVVMEYLAGGS 102 (293)
T ss_pred eeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhc-CCCCeeehhheeeeCCcEEEEEecCCCCc
Confidence 467999999999999854 6789999998643 23456788899999999 89999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC----
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT---- 492 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~---- 492 (627)
|.+++.+. .+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 103 L~~~~~~~------~l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~ 173 (293)
T cd06647 103 LTDVVTET------CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 173 (293)
T ss_pred HHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcceecccccccccc
Confidence 99998743 4788999999999999999999998 9999999999999999999999999886554322
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
...+++.|+|||.+....++.++||||||+++|++++|+.||......+... ....... ......
T Consensus 174 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~------~~~~~~~---------~~~~~~ 238 (293)
T cd06647 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY------LIATNGT---------PELQNP 238 (293)
T ss_pred cccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhee------ehhcCCC---------CCCCCc
Confidence 2346778999999988889999999999999999999999997543221110 0000000 000111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
......+.+++.+||..+|++||++.+++.+
T Consensus 239 ~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 239 EKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1223356678899999999999999999875
No 298
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=2.1e-33 Score=281.39 Aligned_cols=242 Identities=24% Similarity=0.400 Sum_probs=198.0
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|++|.||+++.+ +++.|++|++..... ..+.+..|++.+.++ +|+|++++++++...+..++|+||++++
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (264)
T cd06623 6 VKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSC-ESPYVVKCYGAFYKEGEISIVLEYMDGG 84 (264)
T ss_pred eeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhc-CCCCeeeEEEEEccCCeEEEEEEecCCC
Confidence 478999999999999976 589999999876532 457899999999999 7999999999999999999999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC--
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS-EGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-- 492 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~-- 492 (627)
+|.+++... ..+++..+..++.|+++|+.|||+ .+ ++||||+|+||+++.++.++|+|||.+.......
T Consensus 85 ~L~~~l~~~-----~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~ 156 (264)
T cd06623 85 SLADLLKKV-----GKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ 156 (264)
T ss_pred cHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCccceecccCCCc
Confidence 999999754 358999999999999999999999 88 9999999999999999999999999988764332
Q ss_pred --CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 493 --TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 493 --~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
...++..|+|||...+..++.++||||||+++|+|++|+.||....... ..+....+.... ... .+
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~---~~~~~~~~~~~~-~~~-~~------- 224 (264)
T cd06623 157 CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPS---FFELMQAICDGP-PPS-LP------- 224 (264)
T ss_pred ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccC---HHHHHHHHhcCC-CCC-CC-------
Confidence 2346778999999998889999999999999999999999997654311 111111111111 000 00
Q ss_pred ChHH-HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 571 DVEE-EMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 571 ~~~~-~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.. ....+.+++.+|+..+|++||++.|++++
T Consensus 225 --~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 225 --AEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred --cccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 11 23467778889999999999999999874
No 299
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.9e-33 Score=284.15 Aligned_cols=240 Identities=21% Similarity=0.352 Sum_probs=191.8
Q ss_pred hcccCcCCceEEEEEEE-cCCcEEEEEEecccc--cCHHHHHHHHHHHHHhc--cCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVA--ATKREFEQQMEVVGTIG--KHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~--~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|.. .+++.||+|.+.... ...+++.+|+++++.+. .|||++++++++..+...++||||++
T Consensus 6 ~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06917 6 LELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAE 85 (277)
T ss_pred hhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCC
Confidence 36799999999999996 468999999886542 23467888999999984 49999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT- 492 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~- 492 (627)
+++|.+++... .+++.....++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||.+.......
T Consensus 86 ~~~L~~~~~~~------~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06917 86 GGSVRTLMKAG------PIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS 156 (277)
T ss_pred CCcHHHHHHcc------CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc
Confidence 99999998642 5889999999999999999999998 9999999999999999999999999987664322
Q ss_pred ---CCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006884 493 ---TATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 493 ---~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
...++..|+|||.+.+ ..++.++||||||+++|+|++|+.||....... .... ..... .+.+..
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~------~~~~-~~~~~-----~~~~~~ 224 (277)
T cd06917 157 KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR------AMML-IPKSK-----PPRLED 224 (277)
T ss_pred ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh------hhhc-cccCC-----CCCCCc
Confidence 2347788999998865 456899999999999999999999997542211 1100 00000 011100
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 569 YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.....++.+++.+||+.+|++||++.|++++
T Consensus 225 ----~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 225 ----NGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred ----ccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 0123467788899999999999999999874
No 300
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.1e-33 Score=291.53 Aligned_cols=240 Identities=23% Similarity=0.361 Sum_probs=192.2
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
+.||+|+||.||++... +++.||+|.+..... ..+.+..|++++..+ +|+||+++++.+...+..++||||+.+
T Consensus 7 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (316)
T cd05574 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATL-DHPFLPTLYASFQTETYLCLVMDYCPG 85 (316)
T ss_pred eeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhC-CCCCchhheeeeecCCEEEEEEEecCC
Confidence 67999999999999976 489999999875432 335688899999999 899999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC--
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-- 492 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~-- 492 (627)
++|.+++.... ...+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 86 ~~L~~~~~~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~ 159 (316)
T cd05574 86 GELFRLLQRQP---GKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPP 159 (316)
T ss_pred CCHHHHHHhCC---CCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchhhcccccccc
Confidence 99999987542 246899999999999999999999998 9999999999999999999999999986542110
Q ss_pred -------------------------------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCC
Q 006884 493 -------------------------------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDD 541 (627)
Q Consensus 493 -------------------------------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~ 541 (627)
...|+..|+|||++.+..++.++||||||+++|+|++|+.||.......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~ 239 (316)
T cd05574 160 VSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDE 239 (316)
T ss_pred cccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHH
Confidence 1246778999999998889999999999999999999999997543211
Q ss_pred CCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCC----HHHHHH
Q 006884 542 VVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPK----MDDVVR 602 (627)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs----~~ev~~ 602 (627)
.......... ...........+.+++.+|+..+|++||+ ++|++.
T Consensus 240 ------~~~~~~~~~~----------~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 240 ------TFSNILKKEV----------TFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred ------HHHHHhcCCc----------cCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 1111111100 00111113446778888999999999999 666666
No 301
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.4e-33 Score=282.86 Aligned_cols=241 Identities=26% Similarity=0.390 Sum_probs=192.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||+|... +++.|++|.++.... ..+.+..|++++.++ +|+||+++++.+...+..++|+||+++
T Consensus 5 ~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (264)
T cd06626 5 GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELL-KHPNLVKYYGVEVHREKVYIFMEYCSG 83 (264)
T ss_pred eeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhC-CCCChhheeeeEecCCEEEEEEecCCC
Confidence 467999999999999965 688999999876543 356788999999999 999999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCC-
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTT- 493 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~- 493 (627)
++|.+++... ..+++..+..++.+++.|+.|||+.+ ++|+||+|+||+++.++.+||+|||.+........
T Consensus 84 ~~L~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 84 GTLEELLEHG-----RILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred CcHHHHHhhc-----CCCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEcccccccccCCCCCc
Confidence 9999998753 34788999999999999999999998 99999999999999999999999999877643221
Q ss_pred -------CCCCccccCccccCCCC---CCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006884 494 -------ATRTIGYRAPEVTETRK---ASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 494 -------~~~t~~y~aPE~~~~~~---~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
..++..|+|||++.+.. ++.++||||||+++||+++|+.||...... ........ ... .
T Consensus 156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~-----~~~~~~~~-~~~-----~ 224 (264)
T cd06626 156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE-----FQIMFHVG-AGH-----K 224 (264)
T ss_pred ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch-----HHHHHHHh-cCC-----C
Confidence 34577899999998766 889999999999999999999999753211 01111111 010 0
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 564 VELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
+.+... ......+.+++.+||+.+|++||++.|++.
T Consensus 225 ~~~~~~---~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 225 PPIPDS---LQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred CCCCcc---cccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 011111 111335567888999999999999999875
No 302
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=2e-33 Score=285.11 Aligned_cols=252 Identities=23% Similarity=0.322 Sum_probs=189.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|++|.||+|+.. +++.||||++..... ..+.+.+|++++.++ +||||+++++++.+.+..++||||+.
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~- 82 (284)
T cd07860 5 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLH- 82 (284)
T ss_pred eeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhc-CCCCCcchhhhcccCCcEEEEeeccc-
Confidence 367999999999999965 688999998864322 235788999999999 99999999999999999999999996
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
++|..++.... ...+++..+..++.|++.||+|||+.+ ++||||+|+||+++.++.+||+|||++......
T Consensus 83 ~~l~~~~~~~~---~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~ 156 (284)
T cd07860 83 QDLKKFMDASP---LSGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 156 (284)
T ss_pred cCHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccchhhcccCccc
Confidence 68988886542 346899999999999999999999998 999999999999999999999999998765432
Q ss_pred -CCCCCCccccCccccCCCC-CCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch-----
Q 006884 492 -TTATRTIGYRAPEVTETRK-ASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV----- 564 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~-~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~----- 564 (627)
....++..|+|||++.+.. ++.++||||||+++|||+||+.||......+ ...+..... ........+
T Consensus 157 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~ 231 (284)
T cd07860 157 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID--QLFRIFRTL---GTPDEVVWPGVTSL 231 (284)
T ss_pred cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHHHHh---CCCChhhhhhhhHH
Confidence 1233577899999886644 5889999999999999999999997532111 111111000 000000000
Q ss_pred -----hhh--cCCCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 565 -----ELL--KYQDV----EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 565 -----~l~--~~~~~----~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
... ..... +.....+.+++.+|++.||++|||+++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 232 PDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred HHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 000 00000 0112345678899999999999999999753
No 303
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1.5e-33 Score=287.00 Aligned_cols=252 Identities=21% Similarity=0.335 Sum_probs=188.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|++|.||+|..+ +++.||+|.+..... ....+.+|+++++.+ +|+||+++++++.+++..++||||+.+
T Consensus 10 ~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~- 87 (291)
T cd07844 10 LDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDL-KHANIVTLHDIIHTKKTLTLVFEYLDT- 87 (291)
T ss_pred EEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhC-CCcceeeEEEEEecCCeEEEEEecCCC-
Confidence 367999999999999976 688999999865422 234567899999999 999999999999999999999999975
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~---- 491 (627)
+|.+++.... ..+++.....++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 88 ~L~~~~~~~~----~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 160 (291)
T cd07844 88 DLKQYMDDCG----GGLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTY 160 (291)
T ss_pred CHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECccccccccCCCCccc
Confidence 9999887542 36889999999999999999999998 999999999999999999999999998754322
Q ss_pred CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhh---cccc--------
Q 006884 492 TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVRE---EWTA-------- 559 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~-------- 559 (627)
....++..|+|||++.+ ..++.++||||+|+++|||++|+.||...... .+........... ....
T Consensus 161 ~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (291)
T cd07844 161 SNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDV--EDQLHKIFRVLGTPTEETWPGVSSNPEF 238 (291)
T ss_pred cccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccH--HHHHHHHHHhcCCCChhhhhhhhhcccc
Confidence 12235778999999865 45789999999999999999999999754311 0000000000000 0000
Q ss_pred -----ccc-chhhhc-CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 560 -----EVF-DVELLK-YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 560 -----~~~-d~~l~~-~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
... ...+.. .... .....+.+++.+|++.+|++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 239 KPYSFPFYPPRPLINHAPRL-DRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred ccccccccCChhHHHhCcCC-CCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 000 000000 0000 01145678899999999999999999875
No 304
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.4e-33 Score=286.35 Aligned_cols=239 Identities=21% Similarity=0.352 Sum_probs=192.6
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
.+.||+|++|.||++... +++.+++|++.... ...+.+.+|+.++..+ +|+|++++++++...+..++++||+++++
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~-~h~~vv~~~~~~~~~~~~~~v~e~~~~~~ 102 (285)
T cd06648 24 FVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDY-QHPNIVEMYSSYLVGDELWVVMEFLEGGA 102 (285)
T ss_pred ceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHc-CCCChheEEEEEEcCCeEEEEEeccCCCC
Confidence 368999999999999964 68899999886433 2345688899999999 99999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----C
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----T 492 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~----~ 492 (627)
|.+++... .+++..+..++.|++.|+.|||+.+ ++||||+|+||+++.++.++|+|||.+...... .
T Consensus 103 L~~~~~~~------~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~ 173 (285)
T cd06648 103 LTDIVTHT------RMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRK 173 (285)
T ss_pred HHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccchhhccCCcccc
Confidence 99998752 4789999999999999999999998 999999999999999999999999988754322 2
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
...++..|+|||...+..++.++||||||+++|||++|+.||..... .......... .... ... .
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~------~~~~~~~~~~-~~~~-----~~~---~ 238 (285)
T cd06648 174 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP------LQAMKRIRDN-LPPK-----LKN---L 238 (285)
T ss_pred cccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH------HHHHHHHHhc-CCCC-----Ccc---c
Confidence 23478899999999888899999999999999999999999864321 1111111111 1000 000 0
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
......+.+++.+||+.+|++||++.++++
T Consensus 239 ~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 239 HKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred ccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 112246778889999999999999999986
No 305
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.1e-33 Score=286.39 Aligned_cols=253 Identities=17% Similarity=0.219 Sum_probs=189.1
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeC--CceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSK--DEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~--~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|..+ +++.||+|+++.... ......+|+..+.++.+|+|++++++++.+. +..++|+||++
T Consensus 4 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~ 83 (282)
T cd07831 4 LGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMD 83 (282)
T ss_pred EeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCC
Confidence 467999999999999965 688999999875422 2334557888888886799999999999987 88999999997
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT- 492 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~- 492 (627)
|++.+++.... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++. +.+||+|||+++......
T Consensus 84 -~~l~~~l~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~ 154 (282)
T cd07831 84 -MNLYELIKGRK----RPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP 154 (282)
T ss_pred -ccHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC-CCeEEEecccccccccCCC
Confidence 58888876532 35899999999999999999999998 999999999999999 999999999998764322
Q ss_pred --CCCCCccccCccccC-CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhh-----------hccc
Q 006884 493 --TATRTIGYRAPEVTE-TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVR-----------EEWT 558 (627)
Q Consensus 493 --~~~~t~~y~aPE~~~-~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~-----------~~~~ 558 (627)
...++..|+|||++. +..++.++|||||||++|||++|+.||...+..+ ...+...... ....
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (282)
T cd07831 155 YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD---QIAKIHDVLGTPDAEVLKKFRKSRH 231 (282)
T ss_pred cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH---HHHHHHHHcCCCCHHHHHhhccccc
Confidence 234678899999764 4557889999999999999999999997643211 1111111110 0000
Q ss_pred ccccchhhhc---CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 559 AEVFDVELLK---YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 559 ~~~~d~~l~~---~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.....+.... ..........+.+++.+||+.+|++||++++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 232 MNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred ccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 0000000000 00011234677889999999999999999999763
No 306
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=7.6e-34 Score=288.61 Aligned_cols=252 Identities=21% Similarity=0.330 Sum_probs=191.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||+|..+ +++.||+|+++... ...+.+.+|+++++.+ +|+||+++++++..++..++++||+++
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv~e~~~~ 84 (288)
T cd07833 6 LGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQL-RHENIVNLKEAFRRKGRLYLVFEYVER 84 (288)
T ss_pred EEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhc-CCCCeeehhheEEECCEEEEEEecCCC
Confidence 467999999999999976 57899999886532 2346789999999999 899999999999999999999999998
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC--
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-- 492 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~-- 492 (627)
+.+..+.... ..+++..+..++.|++.|+.|||+.+ ++|+||+|+||++++++.+||+|||++.......
T Consensus 85 ~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~ 156 (288)
T cd07833 85 TLLELLEASP-----GGLPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVSESGVLKLCDFGFARALRARPAS 156 (288)
T ss_pred CHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEEeeecccccCCCccc
Confidence 7776655432 34889999999999999999999998 9999999999999999999999999988765432
Q ss_pred ---CCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhh------------hc
Q 006884 493 ---TATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVR------------EE 556 (627)
Q Consensus 493 ---~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~------------~~ 556 (627)
...++..|+|||++.+. .++.++||||||+++|+|++|+.||......+. ......... ..
T Consensus 157 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07833 157 PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQ---LYLIQKCLGPLPPSHQELFSSNP 233 (288)
T ss_pred cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCCHHHhhhcccCc
Confidence 23457789999999887 889999999999999999999999975322110 000000000 00
Q ss_pred cc-----ccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 557 WT-----AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 557 ~~-----~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.. ....+..............++.+++.+||..+|++||+++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 234 RFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred cccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 00 00000000000000112456788999999999999999999975
No 307
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=3.3e-33 Score=278.72 Aligned_cols=241 Identities=20% Similarity=0.395 Sum_probs=193.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||++... +++.+|+|.+.... ...+.+..|+++++.+ +|||++++++.+...+..++|+||+++
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd08220 5 IRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLL-SHPNIIEYYENFLEDKALMIVMEYAPG 83 (256)
T ss_pred EEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhC-CCCchhheeeeEecCCEEEEEEecCCC
Confidence 467999999999999864 68899999986532 2346788899999999 899999999999989999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC-CCeEEeecccccccCCCC-
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD-LNGCISDVGLAHLINFPT- 492 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~-~~~ki~DfG~a~~~~~~~- 492 (627)
++|.+++.... ...+++..+.+++.+++.|+.|||+.+ ++|+||||+||+++.+ +.+||+|||.+.......
T Consensus 84 ~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~ 157 (256)
T cd08220 84 GTLAEYIQKRC---NSLLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK 157 (256)
T ss_pred CCHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc
Confidence 99999997642 345899999999999999999999998 9999999999999865 457999999998764332
Q ss_pred --CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 493 --TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 493 --~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
...++..|+|||.+.+..++.++||||||+++|+|++|+.||...+. ............ ...
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~------~~~~~~~~~~~~-~~~--------- 221 (256)
T cd08220 158 AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL------PALVLKIMSGTF-API--------- 221 (256)
T ss_pred ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch------HHHHHHHHhcCC-CCC---------
Confidence 23467889999999988899999999999999999999999975421 111211111110 000
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.......+.+++.+||+.+|++|||+.|++.+
T Consensus 222 -~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 222 -SDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred -CCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 01123356788889999999999999999763
No 308
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=2.4e-33 Score=283.51 Aligned_cols=240 Identities=22% Similarity=0.299 Sum_probs=188.8
Q ss_pred cCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 342 LGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 342 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
||+|+||+||++..+ +++.||+|.+.... .....+..|+++++.+ +|||++++.+.+...+..++|+||+++++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKV-SSRFIVSLAYAFETKDDLCLVMTLMNGGD 79 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhC-CCCCEeeeeeEEecCCeEEEEEecCCCCc
Confidence 699999999999865 68899999986432 2244567899999999 89999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---CC
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---TT 493 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~---~~ 493 (627)
|.+++..... ..+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||.+...... ..
T Consensus 80 L~~~l~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 153 (277)
T cd05577 80 LKYHIYNVGE---PGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKG 153 (277)
T ss_pred HHHHHHHcCc---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcchhhhccCCcccc
Confidence 9999976432 35899999999999999999999998 999999999999999999999999998765422 22
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChH
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVE 573 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 573 (627)
..++..|+|||++.+..++.++||||||+++|+|++|+.||....... .... +...... . ... .. .
T Consensus 154 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~-~~~~~~~----~--~~~--~~---~ 219 (277)
T cd05577 154 RAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV--EKEE-LKRRTLE----M--AVE--YP---D 219 (277)
T ss_pred ccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc--cHHH-HHhcccc----c--ccc--CC---c
Confidence 346778999999988889999999999999999999999997643311 1011 1100000 0 000 00 1
Q ss_pred HHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 006884 574 EEMVQMLQIALSCVAKVPDSRP-----KMDDVVR 602 (627)
Q Consensus 574 ~~~~~l~~l~~~Cl~~~P~~RP-----s~~ev~~ 602 (627)
.....+.+++.+||+.+|++|| ++.++++
T Consensus 220 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 220 KFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred cCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 1133566788899999999999 6666664
No 309
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=2.5e-33 Score=285.43 Aligned_cols=250 Identities=22% Similarity=0.320 Sum_probs=186.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|... +++.||+|++.... .....+.+|++++..+ +|+||+++.+++..++..++|+||+. +
T Consensus 10 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv~e~~~-~ 87 (291)
T cd07870 10 LEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGL-KHANIVLLHDIIHTKETLTFVFEYMH-T 87 (291)
T ss_pred EEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhc-CCCCEeEEEEEEecCCeEEEEEeccc-C
Confidence 367999999999999865 68899999986542 2234678899999999 99999999999999999999999995 6
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~---- 491 (627)
++.+++.... ..+.+..+..++.|++.||.|||+.+ |+|+||||+||+++.++.+||+|||+++.....
T Consensus 88 ~l~~~~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 160 (291)
T cd07870 88 DLAQYMIQHP----GGLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTY 160 (291)
T ss_pred CHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEeccccccccCCCCCCC
Confidence 7777765432 34788888999999999999999998 999999999999999999999999998764322
Q ss_pred CCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhh---------------
Q 006884 492 TTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVRE--------------- 555 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~--------------- 555 (627)
....++..|+|||++.+. .++.++||||||+++|||++|+.||+..... .+.+......
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (291)
T cd07870 161 SSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDV-----FEQLEKIWTVLGVPTEDTWPGVSKL 235 (291)
T ss_pred CCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhH-----HHHHHHHHHHcCCCChhhhhhhhhc
Confidence 223467889999998753 5788999999999999999999999754311 1111110000
Q ss_pred -ccccccc----chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 556 -EWTAEVF----DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 556 -~~~~~~~----d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
....... ...+............+.+++.+|+..+|++|||+.|++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 236 PNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred ccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 0000000 0000000000011245667889999999999999999875
No 310
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=2.4e-33 Score=288.93 Aligned_cols=196 Identities=23% Similarity=0.421 Sum_probs=164.4
Q ss_pred hcccCcCCceEEEEEEEc---CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeC--CceeEEE
Q 006884 339 AEVLGKGSYGSTYKAILE---DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSK--DEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~--~~~~lv~ 409 (627)
.+.||+|+||.||+|... +++.||+|.+.... ...+.+.+|++++..+ +||||+++++++... +..++||
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~ 83 (316)
T cd07842 5 EGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLREL-KHENVVSLVEVFLEHADKSVYLLF 83 (316)
T ss_pred EEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhc-CCCCccceEEEEeCCCCceEEEEE
Confidence 367999999999999965 37899999987632 2245678899999999 999999999999988 7899999
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC----CCCeEEeecccc
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ----DLNGCISDVGLA 485 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~----~~~~ki~DfG~a 485 (627)
||+++ ++.+++..........++...+..++.|++.||.|||+.+ |+||||||+||+++. ++.+||+|||++
T Consensus 84 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 84 DYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred eCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 99975 6777776544333346889999999999999999999998 999999999999999 999999999998
Q ss_pred cccCCCC-------CCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 006884 486 HLINFPT-------TATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGH 539 (627)
Q Consensus 486 ~~~~~~~-------~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~ 539 (627)
+...... ...++..|+|||++.+ ..++.++||||||+++|||++|+.||.....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~ 221 (316)
T cd07842 160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREA 221 (316)
T ss_pred cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcc
Confidence 8754321 2245778999998766 4578999999999999999999999986543
No 311
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=4.9e-33 Score=282.37 Aligned_cols=253 Identities=21% Similarity=0.300 Sum_probs=193.0
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||+|... +++.||+|++.... ...+.+.+|+++++++ +|+|++++++++......++|+||+ +
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~~v~e~~-~ 82 (286)
T cd07832 5 LGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQAC-QHPYVVKLLDVFPHGSGFVLVMEYM-P 82 (286)
T ss_pred EeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhC-CCCCCcceeeEEecCCeeEEEeccc-C
Confidence 467999999999999965 68999999987543 2346789999999999 7999999999999999999999999 9
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC--
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-- 492 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~-- 492 (627)
++|.+++.... ..+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||.+.......
T Consensus 83 ~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~ 155 (286)
T cd07832 83 SDLSEVLRDEE----RPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLARLFSEEEPR 155 (286)
T ss_pred CCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCC
Confidence 99999987542 46899999999999999999999998 9999999999999999999999999988764332
Q ss_pred ---CCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhc----cc--cccc
Q 006884 493 ---TATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREE----WT--AEVF 562 (627)
Q Consensus 493 ---~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~ 562 (627)
...++..|+|||++.+. .++.++||||+|+++|||++|.+||...... .....+....... +. .+..
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07832 156 LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI---EQLAIVFRTLGTPNEETWPGLTSLP 232 (286)
T ss_pred ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH---HHHHHHHHHcCCCChHHHhhccCcc
Confidence 23467889999998654 4689999999999999999998888643211 0000110000000 00 0000
Q ss_pred chhhh-----cC----CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 563 DVELL-----KY----QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 563 d~~l~-----~~----~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
+.... .. ...++....+.+++.+|++.+|++||++++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 233 DYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred hhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00000 00 0001223577888999999999999999999864
No 312
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=2.5e-33 Score=281.31 Aligned_cols=239 Identities=21% Similarity=0.274 Sum_probs=186.3
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---c---CHHHHHHHHHHHHHhccCCceeceeeEEeeC--CceeEEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---A---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSK--DEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~--~~~~lv~ 409 (627)
.+.||+|+||.||++... ++..||+|.+.... . ..+.+.+|++++.++ +||||+++++++.+. ...++++
T Consensus 7 ~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~v~ 85 (265)
T cd06652 7 GKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNL-LHERIVQYYGCLRDPMERTLSIFM 85 (265)
T ss_pred eeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhc-CCCCeeeEEeEeccCCCceEEEEE
Confidence 467999999999999965 58899999875321 1 134678899999999 999999999988764 4577899
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||+++++|.+++... ..+++....+++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||.++...
T Consensus 86 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 86 EHMPGGSIKDQLKSY-----GALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASKRLQ 157 (265)
T ss_pred EecCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEECcCccccccc
Confidence 999999999998753 24788889999999999999999998 9999999999999999999999999987543
Q ss_pred C-------CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006884 490 F-------PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 490 ~-------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
. .....++..|+|||++.+..++.++||||||+++|||++|+.||..... ............
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~~~----- 226 (265)
T cd06652 158 TICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA------MAAIFKIATQPT----- 226 (265)
T ss_pred cccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch------HHHHHHHhcCCC-----
Confidence 2 1223467889999999888899999999999999999999999974311 111111111100
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
. ..........+.+++.+|+ .+|++||+++|++++
T Consensus 227 ~-----~~~~~~~~~~~~~~i~~~l-~~p~~Rp~~~~il~~ 261 (265)
T cd06652 227 N-----PVLPPHVSDHCRDFLKRIF-VEAKLRPSADELLRH 261 (265)
T ss_pred C-----CCCchhhCHHHHHHHHHHh-cChhhCCCHHHHhcC
Confidence 0 0011222345667778888 499999999999753
No 313
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=3.6e-33 Score=278.60 Aligned_cols=241 Identities=23% Similarity=0.403 Sum_probs=194.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||++..+ +|..+|+|.+.... ...+.+.+|+++++.+ +|+|++++++.+......++|+||+++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (257)
T cd08225 5 IKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKM-KHPNIVTFFASFQENGRLFIVMEYCDG 83 (257)
T ss_pred EEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhC-CCCChhhhhheeccCCeEEEEEecCCC
Confidence 467999999999999976 58899999986532 3445788999999999 899999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC-CeEEeecccccccCCCC-
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL-NGCISDVGLAHLINFPT- 492 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~-~~ki~DfG~a~~~~~~~- 492 (627)
++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||||+||++++++ .+||+|||.+.......
T Consensus 84 ~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~ 157 (257)
T cd08225 84 GDLMKRINRQR---GVLFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME 157 (257)
T ss_pred CcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccchhccCCcc
Confidence 99999997542 235799999999999999999999998 99999999999999885 46999999987664332
Q ss_pred ---CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 493 ---TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 493 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
...+++.|+|||+..+..++.++||||||+++|||++|+.||.... ..++.......... ..
T Consensus 158 ~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~~-~~-------- 222 (257)
T cd08225 158 LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN------LHQLVLKICQGYFA-PI-------- 222 (257)
T ss_pred cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc------HHHHHHHHhcccCC-CC--------
Confidence 2346788999999988889999999999999999999999986432 22233222221110 00
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.......+.+++.+|+..+|++|||+.|++++
T Consensus 223 --~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 223 --SPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred --CCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 01122356778889999999999999999764
No 314
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.5e-33 Score=280.74 Aligned_cols=245 Identities=21% Similarity=0.340 Sum_probs=192.9
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEee--CCceeEEEecCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYS--KDEKLVVYSYMP 413 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~--~~~~~lv~e~~~ 413 (627)
+.||.|+||.||++... +++.||+|.+..... ..+.+..|+++++.+ +|+|++++++++.. ....++++||++
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~~~~e~~~ 84 (265)
T cd08217 6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILREL-KHPNIVRYYDRIIDRSNQTLYIVMEYCE 84 (265)
T ss_pred eeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhc-CCCccceeeeeeecCCCCEEEEEehhcc
Confidence 67999999999999854 678999998864322 345678899999999 99999999998764 345789999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCeeecCCCCCCeEecCCCCeEEeecccccccCCC
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEG--GAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~--~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 491 (627)
+++|.+++..... ....+++..++.++.|++.||.|||..+ ...++|+||||+||+++.++.+||+|||++......
T Consensus 85 ~~~L~~~l~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~ 163 (265)
T cd08217 85 GGDLAQLIQKCKK-ERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHD 163 (265)
T ss_pred CCCHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccCC
Confidence 9999999976432 2356899999999999999999999332 233999999999999999999999999999876543
Q ss_pred C----CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006884 492 T----TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 492 ~----~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
. ...+++.|+|||++.+..++.++||||||+++|+|++|+.||..... ...... .......
T Consensus 164 ~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~-~~~~~~~-------- 228 (265)
T cd08217 164 SSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ------LQLASK-IKEGKFR-------- 228 (265)
T ss_pred cccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH------HHHHHH-HhcCCCC--------
Confidence 2 23568899999999988899999999999999999999999975431 111111 1111110
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.........+.+++.+|+..+|++||++++|+++
T Consensus 229 --~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 229 --RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred --CCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 0011233467788899999999999999999874
No 315
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=2.6e-33 Score=280.66 Aligned_cols=238 Identities=18% Similarity=0.278 Sum_probs=192.2
Q ss_pred cCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 342 LGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 342 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
||+|++|.||+++.. +++.||+|.+.... ...+.+.+|++++..+ +||||+++++.+.++...++++||+++++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEEC-NHPFIVKLYRTFKDKKYIYMLMEYCLGGE 79 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhC-CCCCEeeeeeeEEcCCccEEEEecCCCCc
Confidence 699999999999976 48899999986532 2346788999999999 99999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---CC
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---TT 493 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~---~~ 493 (627)
|.+++.+. ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+...... ..
T Consensus 80 L~~~l~~~-----~~l~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~ 151 (262)
T cd05572 80 LWTILRDR-----GLFDEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWT 151 (262)
T ss_pred HHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCCCCEEEeeCCcccccCccccccc
Confidence 99999764 24889999999999999999999988 999999999999999999999999999876543 22
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChH
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVE 573 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 573 (627)
..++..|+|||.+.+..++.++|+||||+++|+|++|+.||.....+ ............... ....
T Consensus 152 ~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~----------~~~~ 217 (262)
T cd05572 152 FCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDED----PMEIYNDILKGNGKL----------EFPN 217 (262)
T ss_pred ccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCC----HHHHHHHHhccCCCC----------CCCc
Confidence 34678899999998888999999999999999999999999765321 112222211100000 0011
Q ss_pred HHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 006884 574 EEMVQMLQIALSCVAKVPDSRPK-----MDDVVR 602 (627)
Q Consensus 574 ~~~~~l~~l~~~Cl~~~P~~RPs-----~~ev~~ 602 (627)
.....+.+++.+||..+|++||+ ++|+++
T Consensus 218 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 218 YIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred ccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 11346778889999999999999 677665
No 316
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.6e-33 Score=287.55 Aligned_cols=252 Identities=21% Similarity=0.364 Sum_probs=191.4
Q ss_pred CCHHHHHHHHhcccCcCCceEEEEEEEcC-CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCce
Q 006884 329 FDLEDLLRASAEVLGKGSYGSTYKAILED-GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEK 405 (627)
Q Consensus 329 ~~~~~l~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~ 405 (627)
++++++ ...+.||+|+||.||+|..++ ++.||||.++.... ...++..|++++.....|+||+++++++.+....
T Consensus 12 ~~~~~~--~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~ 89 (296)
T cd06618 12 ADLNDL--ENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDV 89 (296)
T ss_pred CCcchh--eeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeE
Confidence 344443 335789999999999999874 88999999875432 3455677777777775799999999999999999
Q ss_pred eEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCCeEecCCCCeEEeeccc
Q 006884 406 LVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE-GGAKFTHGNIKSSNVLLTQDLNGCISDVGL 484 (627)
Q Consensus 406 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~ 484 (627)
+++|||+. +++.+++.... ..+++..+..++.|++.|+.|||+. + |+||||+|+||++++++.+||+|||+
T Consensus 90 ~~v~e~~~-~~l~~l~~~~~----~~l~~~~~~~i~~~i~~~l~~lH~~~~---i~H~dl~p~nill~~~~~~kL~dfg~ 161 (296)
T cd06618 90 FICMELMS-TCLDKLLKRIQ----GPIPEDILGKMTVAIVKALHYLKEKHG---VIHRDVKPSNILLDASGNVKLCDFGI 161 (296)
T ss_pred EEEeeccC-cCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhhCC---EecCCCcHHHEEEcCCCCEEECcccc
Confidence 99999985 47777765432 3689999999999999999999974 6 99999999999999999999999999
Q ss_pred ccccCCCC---CCCCCccccCccccCCCC----CCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcc
Q 006884 485 AHLINFPT---TATRTIGYRAPEVTETRK----ASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEW 557 (627)
Q Consensus 485 a~~~~~~~---~~~~t~~y~aPE~~~~~~----~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 557 (627)
+....... ...++..|+|||.+.+.. ++.++||||||+++|||++|+.||...... .+..........
T Consensus 162 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~~~~~~~~~~~ 236 (296)
T cd06618 162 SGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-----FEVLTKILQEEP 236 (296)
T ss_pred chhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-----HHHHHHHhcCCC
Confidence 87654322 223567899999987654 789999999999999999999999643211 111111111110
Q ss_pred cccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006884 558 TAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMI 604 (627)
Q Consensus 558 ~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L 604 (627)
. . ..... ....++.+++.+||+.+|++||++++++++-
T Consensus 237 ~-~-----~~~~~---~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~ 274 (296)
T cd06618 237 P-S-----LPPNE---GFSPDFCSFVDLCLTKDHRKRPKYRELLQHP 274 (296)
T ss_pred C-C-----CCCCC---CCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 0 0 00000 1234567888899999999999999998763
No 317
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=2.4e-33 Score=285.82 Aligned_cols=251 Identities=22% Similarity=0.281 Sum_probs=189.3
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeC--CceeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSK--DEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~--~~~~lv~e~~ 412 (627)
.+.||+|+||.||+|..+ +++.+++|.++.... ....+.+|++++.++ +||||+++.+++... ...++|+||+
T Consensus 10 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~~lv~e~~ 88 (293)
T cd07843 10 LNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKL-QHPNIVTVKEVVVGSNLDKIYMVMEYV 88 (293)
T ss_pred hhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhc-CCCCEEEEEEEEEecCCCcEEEEehhc
Confidence 477999999999999976 588999999864422 234567899999999 899999999998877 7899999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC-
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP- 491 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~- 491 (627)
+ ++|.+++.... ..+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||++......
T Consensus 89 ~-~~L~~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 160 (293)
T cd07843 89 E-HDLKSLMETMK----QPFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL 160 (293)
T ss_pred C-cCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEeecCceeeccCCc
Confidence 7 48998887542 25899999999999999999999998 999999999999999999999999998876443
Q ss_pred ---CCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhh-----------h-
Q 006884 492 ---TTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVR-----------E- 555 (627)
Q Consensus 492 ---~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~-----------~- 555 (627)
....++..|+|||.+.+. .++.++||||||+++|||++|+.||......+. . ..+..... +
T Consensus 161 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~ 237 (293)
T cd07843 161 KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQ--L-NKIFKLLGTPTEKIWPGFSEL 237 (293)
T ss_pred cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHH--H-HHHHHHhCCCchHHHHHhhcc
Confidence 123457789999998654 468999999999999999999999975432110 0 00000000 0
Q ss_pred -----cccccccchhhhcCCChHH--HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 556 -----EWTAEVFDVELLKYQDVEE--EMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 556 -----~~~~~~~d~~l~~~~~~~~--~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
..........+. ...+. ....+.+++.+||+.+|++|||+.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 238 PGAKKKTFTKYPYNQLR--KKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred chhcccccccccchhhh--ccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 000000000000 00111 13456778889999999999999999763
No 318
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=4.4e-33 Score=276.56 Aligned_cols=242 Identities=26% Similarity=0.423 Sum_probs=197.2
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc-CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA-TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
.+.||+|++|.||++... +++.+++|++..... ..+.+.+|++++..+ +|+|++++.+.+......++++||+++++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~l~~e~~~~~~ 83 (253)
T cd05122 5 LEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKC-KHPNIVKYYGSYLKKDELWIVMEFCSGGS 83 (253)
T ss_pred eeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCCeEEEEEecCCCCc
Confidence 367999999999999976 688999999876543 567899999999999 79999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---CC
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---TT 493 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~---~~ 493 (627)
|.+++.... ..+++..+..++.|++.|+.|||+.+ ++||||+|+||++++++.++|+|||.+...... ..
T Consensus 84 L~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 156 (253)
T cd05122 84 LKDLLKSTN----QTLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNT 156 (253)
T ss_pred HHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccCCeEEEeeccccccccccccccc
Confidence 999987642 46899999999999999999999988 999999999999999999999999998776543 24
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChH
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVE 573 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 573 (627)
..++..|+|||++.+..++.++||||||+++|+|++|+.||...... ........ ...... ....
T Consensus 157 ~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~-~~~~~~--------~~~~ 221 (253)
T cd05122 157 MVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM------KALFKIAT-NGPPGL--------RNPE 221 (253)
T ss_pred eecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH------HHHHHHHh-cCCCCc--------Cccc
Confidence 45678899999998888999999999999999999999998753211 11111111 000000 0001
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 574 EEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 574 ~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.....+.+++.+|++.+|++|||+.|++++
T Consensus 222 ~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 222 KWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred ccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 113457788889999999999999999763
No 319
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.8e-34 Score=308.93 Aligned_cols=260 Identities=17% Similarity=0.251 Sum_probs=180.1
Q ss_pred hcccCcCCceEEEEEEEcC--CcEEEEE------------------EecccccCHHHHHHHHHHHHHhccCCceeceeeE
Q 006884 339 AEVLGKGSYGSTYKAILED--GTTVVVK------------------RLREVAATKREFEQQMEVVGTIGKHSNVVPVRAY 398 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~--~~~vavK------------------~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~ 398 (627)
.+.||+|+||+||++..+. +..+++| .+.........+.+|++++.++ +|+||++++++
T Consensus 153 i~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~ 231 (501)
T PHA03210 153 IDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRL-NHENILKIEEI 231 (501)
T ss_pred EeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhC-CCCCcCcEeEE
Confidence 4789999999999987542 2222222 1111112245688999999999 99999999999
Q ss_pred EeeCCceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeE
Q 006884 399 YYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGC 478 (627)
Q Consensus 399 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~k 478 (627)
+...+..++|++++. ++|.+++..................++.|++.||.|||+++ |+||||||+|||++.++.+|
T Consensus 232 ~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g---IiHrDLKP~NILl~~~~~vk 307 (501)
T PHA03210 232 LRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK---LIHRDIKLENIFLNCDGKIV 307 (501)
T ss_pred EEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEE
Confidence 999999999999984 57877776433222223345667789999999999999998 99999999999999999999
Q ss_pred EeecccccccCCCC-----CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCC-CCCCCCCCCCCHHHHHHHH
Q 006884 479 ISDVGLAHLINFPT-----TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAP-LQHSGHDDVVDLPRWVRSV 552 (627)
Q Consensus 479 i~DfG~a~~~~~~~-----~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p-f~~~~~~~~~~~~~~~~~~ 552 (627)
|+|||+++...... ...||..|+|||++.+..++.++|||||||++|||++|..+ +..........+.+.+...
T Consensus 308 L~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~ 387 (501)
T PHA03210 308 LGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSL 387 (501)
T ss_pred EEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhc
Confidence 99999998764321 24588999999999999999999999999999999998854 4332211111111111100
Q ss_pred h--hhcccc---cccch----hhh-cCCChHH------HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 553 V--REEWTA---EVFDV----ELL-KYQDVEE------EMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 553 ~--~~~~~~---~~~d~----~l~-~~~~~~~------~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
. .+.... ..++. ... .....+. ....+.+++.+|++.||.+|||+.|++.+
T Consensus 388 ~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 388 SVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred ccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 0 000000 00000 000 0000111 11245667889999999999999999874
No 320
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=5.3e-33 Score=282.91 Aligned_cols=237 Identities=19% Similarity=0.277 Sum_probs=192.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||++... +++.||+|.+.... ...+.+.+|++++.++ .||||+++++++...+..++||||++
T Consensus 6 ~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~ 84 (290)
T cd05580 6 IKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSI-RHPFLVNLYGSFQDDSNLYLVMEYVP 84 (290)
T ss_pred EEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCccceeeEEEcCCeEEEEEecCC
Confidence 467999999999999965 58999999986532 2345688899999999 79999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC-C
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-T 492 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-~ 492 (627)
+++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||+++..... .
T Consensus 85 ~~~L~~~~~~~-----~~l~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~ 156 (290)
T cd05580 85 GGELFSHLRKS-----GRFPEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTY 156 (290)
T ss_pred CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEeeCCCccccCCCCC
Confidence 99999999764 35889999999999999999999988 999999999999999999999999999876443 2
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
...+++.|+|||.+.+..++.++||||||+++|+|++|+.||..... ........... . .+ ...
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~-~------~~--~~~- 220 (290)
T cd05580 157 TLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP------IQIYEKILEGK-V------RF--PSF- 220 (290)
T ss_pred CCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHhcCC-c------cC--Ccc-
Confidence 34578899999999888889999999999999999999999975431 11111111111 0 00 011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRP-----KMDDVVR 602 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RP-----s~~ev~~ 602 (627)
....+.+++.+||..+|.+|| +++|+++
T Consensus 221 --~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 221 --FSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred --CCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 123566788899999999999 7777765
No 321
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1.8e-33 Score=281.18 Aligned_cols=239 Identities=20% Similarity=0.275 Sum_probs=194.3
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||.|+||.||++... +++.||+|.+.... ...+.+.+|+++++++ +||||+++++.+.+....++|+||+.
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 83 (258)
T cd05578 5 LRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQEL-NHPFLVNLWYSFQDEENMYLVVDLLL 83 (258)
T ss_pred EEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhC-CCCChHHHHHhhcCCCeEEEEEeCCC
Confidence 468999999999999976 58999999986542 2346788999999999 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||.+......
T Consensus 84 ~~~L~~~l~~~-----~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~ 155 (258)
T cd05578 84 GGDLRYHLSQK-----VKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTL 155 (258)
T ss_pred CCCHHHHHHhc-----CCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccccccCCCcc
Confidence 99999999754 35889999999999999999999998 999999999999999999999999998776443
Q ss_pred -CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 492 -TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
....++..|+|||++.+..++.++|+||||+++|+|++|+.||...... ...+....... ... .
T Consensus 156 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~~~~~~~~--~~~---------~ 220 (258)
T cd05578 156 TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT----IRDQIRAKQET--ADV---------L 220 (258)
T ss_pred ccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc----HHHHHHHHhcc--ccc---------c
Confidence 2344677899999998888999999999999999999999999865432 11122111111 000 0
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCH--HHHH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRPKM--DDVV 601 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~--~ev~ 601 (627)
........+.+++.+||+.+|.+||++ +|++
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 221 YPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred CcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 111122567788899999999999999 6654
No 322
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=4.8e-33 Score=285.68 Aligned_cols=245 Identities=22% Similarity=0.334 Sum_probs=193.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.. ++..+|+|.+.... ...+++.+|+++++.+ +|+|++++.+++......++|+||+.
T Consensus 20 ~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 98 (308)
T cd06634 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTAWLVMEYCL 98 (308)
T ss_pred HHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhC-CCCCcccEEEEEEcCCeeEEEEEccC
Confidence 467999999999999965 57889999886421 1234677899999999 99999999999999999999999996
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCC
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTT 493 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~ 493 (627)
|++.+++.... ..+++..+..++.|++.|+.|||+.+ ++||||||+||+++.++.++|+|||++........
T Consensus 99 -~~l~~~~~~~~----~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 170 (308)
T cd06634 99 -GSASDLLEVHK----KPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX 170 (308)
T ss_pred -CCHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccceeecCccc
Confidence 68887775432 35889999999999999999999988 99999999999999999999999999987766666
Q ss_pred CCCCccccCccccC---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 494 ATRTIGYRAPEVTE---TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 494 ~~~t~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
..++..|+|||++. ...++.++|||||||++|||++|+.||...... ........... .. .
T Consensus 171 ~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~~~-~~---------~ 234 (308)
T cd06634 171 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM------SALYHIAQNES-PA---------L 234 (308)
T ss_pred ccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH------HHHHHHhhcCC-CC---------c
Confidence 67888999999974 356788999999999999999999998643211 11111111110 00 0
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhc
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQ 608 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~ 608 (627)
........+.+++.+||..+|++||+++++++....+.
T Consensus 235 ~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~ 272 (308)
T cd06634 235 QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 272 (308)
T ss_pred CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccc
Confidence 01122345677888999999999999999998755443
No 323
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=3.6e-33 Score=284.21 Aligned_cols=239 Identities=21% Similarity=0.352 Sum_probs=191.3
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
...||+|+||.||++..+ +++.||||++.... .....+.+|+.++..+ +|+|++++++.+...+..++||||+++++
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 103 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWVVMEFLEGGA 103 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhc-CCcchhheeeEEEeCCEEEEEEecCCCCc
Confidence 367999999999999865 68899999875432 2345688899999999 89999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----C
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----T 492 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~----~ 492 (627)
|.+++... .+++.....++.|++.|++|||+.+ ++||||+|+||+++.++.++|+|||++...... .
T Consensus 104 L~~~~~~~------~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~ 174 (292)
T cd06657 104 LTDIVTHT------RMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 174 (292)
T ss_pred HHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccceeccccccccc
Confidence 99987532 4789999999999999999999998 999999999999999999999999988765332 2
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
...++..|+|||++.+..++.++||||||+++|||++|+.||...... +.... ...... ..+.. .
T Consensus 175 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~------~~~~~-~~~~~~-----~~~~~---~ 239 (292)
T cd06657 175 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL------KAMKM-IRDNLP-----PKLKN---L 239 (292)
T ss_pred ccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHH-HHhhCC-----cccCC---c
Confidence 234678899999998888999999999999999999999998743211 11111 111110 00101 1
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
......+.+++.+||+.+|.+||++.++++
T Consensus 240 ~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 240 HKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred ccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 112234567888999999999999999987
No 324
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1e-32 Score=279.65 Aligned_cols=255 Identities=24% Similarity=0.353 Sum_probs=190.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|++|.||+|..+ +|..||+|++.... ...+.+.+|+++++.+ +|+|++++++++.+.+..++++||++
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~iv~~~~~~~~~~~~~iv~e~~~- 81 (283)
T cd07835 4 VEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKEL-NHPNIVRLLDVVHSENKLYLVFEFLD- 81 (283)
T ss_pred heEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhc-CCCCccCHhheeccCCeEEEEEeccC-
Confidence 467999999999999965 78999999986542 2235688899999999 89999999999999999999999995
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
++|.+++..... ..+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||.++.....
T Consensus 82 ~~l~~~~~~~~~---~~~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~ 155 (283)
T cd07835 82 LDLKKYMDSSPL---TGLDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRT 155 (283)
T ss_pred cCHHHHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCcEEEeecccccccCCCccc
Confidence 689999875431 35899999999999999999999988 999999999999999999999999999765322
Q ss_pred -CCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhh---hcccc--cccc-
Q 006884 492 -TTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVR---EEWTA--EVFD- 563 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~d- 563 (627)
....++..|+|||++.+. .++.++||||||+++|||++|+.||......+ .+....+.... ..+.. ...+
T Consensus 156 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd07835 156 YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID--QLFRIFRTLGTPDEDVWPGVTSLPDY 233 (283)
T ss_pred cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCChHHhhhhhhchhh
Confidence 122357789999987654 56899999999999999999999997542110 11111100000 00000 0000
Q ss_pred -hhhhc--CCC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 564 -VELLK--YQD----VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 564 -~~l~~--~~~----~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
..... ... .+.....+.+++.+|++.+|++|||++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 234 KPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred hhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00000 000 01112456788999999999999999999753
No 325
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-34 Score=268.07 Aligned_cols=250 Identities=20% Similarity=0.269 Sum_probs=195.8
Q ss_pred HHhcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEee----CCceeEEEec
Q 006884 337 ASAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS----KDEKLVVYSY 411 (627)
Q Consensus 337 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~----~~~~~lv~e~ 411 (627)
.+.++||-|-.|.|-....+ .++.+|+|++... ....+|+++--+...|||||.+++.|.. ...+++|||.
T Consensus 65 is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~ 140 (400)
T KOG0604|consen 65 ISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMEC 140 (400)
T ss_pred ehhhhhccccCCceEEEEeccchhhhHHHHHhcC----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeec
Confidence 34588999999999999865 6889999998643 3346777776667799999999998864 3456789999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC---CCCeEEeeccccccc
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ---DLNGCISDVGLAHLI 488 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~---~~~~ki~DfG~a~~~ 488 (627)
|+||.|.+.++... ...+++.++.+|+.||+.|+.|||+.+ |.||||||+|+|... |..+|++|||+|+..
T Consensus 141 meGGeLfsriq~~g---~~afTErea~eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t 214 (400)
T KOG0604|consen 141 MEGGELFSRIQDRG---DQAFTEREASEIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTTTSPNAPLKLTDFGFAKET 214 (400)
T ss_pred ccchHHHHHHHHcc---cccchHHHHHHHHHHHHHHHHHHHhcc---hhhccCChhheeeecCCCCcceEeccccccccc
Confidence 99999999998653 467999999999999999999999998 999999999999964 567899999999876
Q ss_pred CCC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchh
Q 006884 489 NFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVE 565 (627)
Q Consensus 489 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 565 (627)
... .+...|+.|.|||++...+|+..+|+||+||++|-|+.|.+||...... .+....+..++.+... ..+
T Consensus 215 ~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~---aispgMk~rI~~gqy~-FP~-- 288 (400)
T KOG0604|consen 215 QEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL---AISPGMKRRIRTGQYE-FPE-- 288 (400)
T ss_pred CCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCc---cCChhHHhHhhccCcc-CCC--
Confidence 543 4566799999999999999999999999999999999999999865432 2222222222222110 001
Q ss_pred hhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 006884 566 LLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQ 606 (627)
Q Consensus 566 l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~ 606 (627)
+.+....+..-++|+..++.+|++|.|+++++.+=.-
T Consensus 289 ----pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi 325 (400)
T KOG0604|consen 289 ----PEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWI 325 (400)
T ss_pred ----hhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchh
Confidence 1123334455667888999999999999999875443
No 326
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=3e-33 Score=280.20 Aligned_cols=238 Identities=20% Similarity=0.338 Sum_probs=189.9
Q ss_pred cCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 342 LGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 342 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
||+|+||.||+++.. +++.+++|.+..... ..+.+.+|++++.++ +|+|++++++.+......++++||+++++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQA-QSPYVVKLYYSFQGKKNLYLVMEYLPGGD 79 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhC-CCcchhHHHHheecCcEEEEEEecCCCCc
Confidence 689999999999977 489999999865432 345788889999999 89999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC-----
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----- 491 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~----- 491 (627)
|.+++.... .+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 80 L~~~l~~~~-----~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 151 (265)
T cd05579 80 LASLLENVG-----SLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINL 151 (265)
T ss_pred HHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccchhcccCccccc
Confidence 999997542 5899999999999999999999998 999999999999999999999999998764322
Q ss_pred -------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006884 492 -------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 492 -------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
....++..|+|||......++.++||||||+++||+++|+.||..... ........... . .
T Consensus 152 ~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~------~~~~~~~~~~~-~----~- 219 (265)
T cd05579 152 NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP------EEIFQNILNGK-I----E- 219 (265)
T ss_pred ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHhcCC-c----C-
Confidence 112356789999999888899999999999999999999999975431 11111111100 0 0
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006884 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMI 604 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L 604 (627)
..........+.+++.+|++.+|++|||+.++.+.|
T Consensus 220 ----~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 220 ----WPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred ----CCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 000000134567888899999999999995555444
No 327
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=5.2e-33 Score=281.93 Aligned_cols=255 Identities=24% Similarity=0.367 Sum_probs=191.6
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|++|.||+|+.. +|..||||+++... ...+.+.+|+++++.+ +|+||+++++++...+..++||||+++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~- 82 (284)
T cd07836 5 LEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKEL-KHENIVRLHDVIHTENKLMLVFEYMDK- 82 (284)
T ss_pred eeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhh-cCCCEeeeeeeEeeCCcEEEEEecCCc-
Confidence 367999999999999976 68899999987543 2345677899999999 999999999999999999999999985
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~---- 491 (627)
+|.+++..... ...+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||+++.....
T Consensus 83 ~l~~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~ 157 (284)
T cd07836 83 DLKKYMDTHGV--RGALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTF 157 (284)
T ss_pred cHHHHHHhcCC--CCCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcccc
Confidence 88888865432 245899999999999999999999998 999999999999999999999999999765332
Q ss_pred CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHh--hhcc-----cccccc
Q 006884 492 TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVV--REEW-----TAEVFD 563 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~d 563 (627)
....++..|++||++.+ ..++.++||||||+++|||++|+.||......+. ......... .... ......
T Consensus 158 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd07836 158 SNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQ--LLKIFRIMGTPTESTWPGISQLPEYK 235 (284)
T ss_pred ccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHH--HHHHHHHhCCCChhhHHHHhcCchhc
Confidence 22346788999998865 4568999999999999999999999976432210 000000000 0000 000000
Q ss_pred hhhhc------CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 564 VELLK------YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 564 ~~l~~------~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
..... ....+.....+.+++.+|++.+|.+||++.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 236 PTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred ccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000 0001122345678899999999999999999975
No 328
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1e-32 Score=283.89 Aligned_cols=249 Identities=24% Similarity=0.359 Sum_probs=194.6
Q ss_pred CCHHHHHHHHhcccCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCC
Q 006884 329 FDLEDLLRASAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD 403 (627)
Q Consensus 329 ~~~~~l~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~ 403 (627)
.+.+|+. ...+.||+|+||.||+|+.. +++.|++|++..... ..+.+..|+++++.+ +|+|++++.+++.+..
T Consensus 17 ~~~~~~~-~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~ 94 (313)
T cd06633 17 DDPEEIF-VGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQL-KHPNTIEYKGCYLKEH 94 (313)
T ss_pred CCHHHHh-hcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhC-CCCCCccEEEEEEeCC
Confidence 4455552 22467999999999999965 688999999864322 234678899999999 8999999999999999
Q ss_pred ceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecc
Q 006884 404 EKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVG 483 (627)
Q Consensus 404 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG 483 (627)
..++||||+. |++.+++.... ..+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.++.+||+|||
T Consensus 95 ~~~lv~e~~~-~~l~~~l~~~~----~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg 166 (313)
T cd06633 95 TAWLVMEYCL-GSASDLLEVHK----KPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFG 166 (313)
T ss_pred EEEEEEecCC-CCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecC
Confidence 9999999995 57877776432 35899999999999999999999998 9999999999999999999999999
Q ss_pred cccccCCCCCCCCCccccCccccC---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccc
Q 006884 484 LAHLINFPTTATRTIGYRAPEVTE---TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAE 560 (627)
Q Consensus 484 ~a~~~~~~~~~~~t~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (627)
++..........++..|+|||++. ...++.++||||||+++|||++|..||..... ............. .
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~------~~~~~~~~~~~~~-~ 239 (313)
T cd06633 167 SASKSSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA------MSALYHIAQNDSP-T 239 (313)
T ss_pred CCcccCCCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHHhcCCC-C
Confidence 987665555566888999999974 45688999999999999999999999865421 1111111111110 0
Q ss_pred ccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 561 VFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 561 ~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.. .......+.+++.+||+.+|.+||++.+++.+
T Consensus 240 ~~---------~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 240 LQ---------SNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred CC---------ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 01112346778889999999999999999864
No 329
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=8.5e-33 Score=279.55 Aligned_cols=240 Identities=20% Similarity=0.292 Sum_probs=183.8
Q ss_pred ccCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHh--ccCCceeceeeEEeeCCceeEEEecCC
Q 006884 341 VLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTI--GKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 341 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l--~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.||+|+||.||++... +++.||+|.+..... ....+..|..++..+ ..||+|+.+.+++...+..++|+||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999864 588999998865321 122234444333332 279999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|..++... ..+++..+..++.|++.|+.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 81 g~~L~~~l~~~-----~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~ 152 (278)
T cd05606 81 GGDLHYHLSQH-----GVFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP 152 (278)
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCccccCccCC
Confidence 99999988643 35899999999999999999999988 999999999999999999999999998765322
Q ss_pred CCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 492 TTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
....++..|+|||++.++ .++.++||||+|+++|||++|+.||.......... ....... .+..+.
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~----~~~~~~~------~~~~~~--- 219 (278)
T cd05606 153 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE----IDRMTLT------MAVELP--- 219 (278)
T ss_pred cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHH----HHHHhhc------cCCCCC---
Confidence 234578899999998754 68999999999999999999999997543221111 1000000 000000
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRP-----KMDDVVRM 603 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~ev~~~ 603 (627)
......+.+++.+|+..+|.+|| ++.+++++
T Consensus 220 --~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 220 --DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred --CcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 11134567788899999999999 99999863
No 330
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=5.3e-33 Score=283.34 Aligned_cols=246 Identities=16% Similarity=0.254 Sum_probs=172.0
Q ss_pred hcccCcCCceEEEEEEEcCC----cEEEEEEecccccC---HH---------HHHHHHHHHHHhccCCceeceeeEEeeC
Q 006884 339 AEVLGKGSYGSTYKAILEDG----TTVVVKRLREVAAT---KR---------EFEQQMEVVGTIGKHSNVVPVRAYYYSK 402 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~----~~vavK~~~~~~~~---~~---------~~~~e~~~l~~l~~h~niv~~~~~~~~~ 402 (627)
.+.||+|+||.||+|...++ ..+|+|+....... +. ....+...+..+ .|++++++++++...
T Consensus 17 ~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~-~h~~i~~~~~~~~~~ 95 (294)
T PHA02882 17 DKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNI-DHLGIPKYYGCGSFK 95 (294)
T ss_pred eeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccC-CCCCCCcEEEeeeEe
Confidence 46799999999999997643 45566643221111 10 111122233344 799999999876654
Q ss_pred C----ceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeE
Q 006884 403 D----EKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGC 478 (627)
Q Consensus 403 ~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~k 478 (627)
. ..+++++++. .++.+.+... ...++..+..++.|++.||.|||+.+ |+||||||+|||++.++.++
T Consensus 96 ~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~Nill~~~~~~~ 166 (294)
T PHA02882 96 RCRMYYRFILLEKLV-ENTKEIFKRI-----KCKNKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDGNNRGY 166 (294)
T ss_pred cCCceEEEEEEehhc-cCHHHHHHhh-----ccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCcEE
Confidence 3 3356777763 3666666543 23577888999999999999999998 99999999999999999999
Q ss_pred EeecccccccCCC-----------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHH
Q 006884 479 ISDVGLAHLINFP-----------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPR 547 (627)
Q Consensus 479 i~DfG~a~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~ 547 (627)
|+|||+++..... ....||+.|+|||+..+..++.++|||||||++|||++|+.||........ +..
T Consensus 167 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~--~~~ 244 (294)
T PHA02882 167 IIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGN--LIH 244 (294)
T ss_pred EEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchH--HHH
Confidence 9999999765211 123578999999999999999999999999999999999999986532211 110
Q ss_pred HHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006884 548 WVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMI 604 (627)
Q Consensus 548 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L 604 (627)
.... .....+..... . .......+.+++..|++.+|++||+++++.+.+
T Consensus 245 ~~~~----~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 245 AAKC----DFIKRLHEGKI-K---IKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HhHH----HHHHHhhhhhh-c---cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 0000 00000000000 0 112235677888899999999999999999876
No 331
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.9e-32 Score=273.25 Aligned_cols=241 Identities=24% Similarity=0.381 Sum_probs=196.5
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeC--CceeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSK--DEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~--~~~~lv~e~~ 412 (627)
.+.||+|++|.||+|..+ +++.|++|++.... ...+.+.+|+++++++ +|+||+++++.+... ...++++||+
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv~e~~ 83 (260)
T cd06606 5 GELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSL-QHPNIVRYYGSERDEEKNTLNIFLEYV 83 (260)
T ss_pred eeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHc-CCCCEeeEEEEEecCCCCeEEEEEEec
Confidence 367999999999999976 68899999987654 2356788999999999 899999999999988 8899999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT 492 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~ 492 (627)
++++|.+++.... .+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+.......
T Consensus 84 ~~~~L~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 155 (260)
T cd06606 84 SGGSLSSLLKKFG-----KLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIE 155 (260)
T ss_pred CCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEcccccEEeccccc
Confidence 9999999997642 6899999999999999999999988 9999999999999999999999999988765432
Q ss_pred ------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhh
Q 006884 493 ------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVEL 566 (627)
Q Consensus 493 ------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 566 (627)
...++..|+|||...+..++.++||||||+++|+|++|+.||.... ................
T Consensus 156 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~------- 223 (260)
T cd06606 156 TGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG-----NPMAALYKIGSSGEPP------- 223 (260)
T ss_pred ccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----chHHHHHhccccCCCc-------
Confidence 2346788999999988889999999999999999999999997643 1111111111000000
Q ss_pred hcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 567 LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 567 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.........+.+++.+|+..+|++||++.|++++
T Consensus 224 ---~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 224 ---EIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred ---CCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 0111223567788889999999999999999863
No 332
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=5.1e-33 Score=285.68 Aligned_cols=252 Identities=21% Similarity=0.299 Sum_probs=184.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCC--------cee
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD--------EKL 406 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~--------~~~ 406 (627)
.+.||+|+||.||+|..+ +++.||||.+..... ....+.+|+++++++ +||||+++++++...+ ..+
T Consensus 17 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~~~ 95 (310)
T cd07865 17 LAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEICRTKATPYNRYKGSFY 95 (310)
T ss_pred EEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhC-CCCCccceEEEEecccccccCCCceEE
Confidence 467999999999999965 688999998864321 234567899999999 9999999999987654 348
Q ss_pred EEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccc
Q 006884 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH 486 (627)
Q Consensus 407 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 486 (627)
+|+||+. ++|.+++... ...+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||++.
T Consensus 96 lv~e~~~-~~l~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~ 167 (310)
T cd07865 96 LVFEFCE-HDLAGLLSNK----NVKFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLADFGLAR 167 (310)
T ss_pred EEEcCCC-cCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCcEEECcCCCcc
Confidence 9999996 4788877643 235899999999999999999999998 9999999999999999999999999997
Q ss_pred ccCCCC--------CCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcc
Q 006884 487 LINFPT--------TATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEW 557 (627)
Q Consensus 487 ~~~~~~--------~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 557 (627)
...... ...++..|+|||++.+. .++.++||||||+++|||++|+.||....... ....+..... ..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~---~~~~~~~~~~-~~ 243 (310)
T cd07865 168 AFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQH---QLTLISQLCG-SI 243 (310)
T ss_pred cccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhC-CC
Confidence 653221 22356789999988664 46889999999999999999999997543211 1111111100 00
Q ss_pred cccc---------cch-hhhcC--CChH------HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 558 TAEV---------FDV-ELLKY--QDVE------EEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 558 ~~~~---------~d~-~l~~~--~~~~------~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
..+. .+. ..... .... .....+.+++.+||..+|++|||++|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 244 TPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred ChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 0000 000 00000 0000 012345689999999999999999999753
No 333
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.7e-32 Score=282.76 Aligned_cols=263 Identities=22% Similarity=0.330 Sum_probs=192.6
Q ss_pred cccCcC--CceEEEEEEEc-CCcEEEEEEecccccC---HHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 340 EVLGKG--SYGSTYKAILE-DGTTVVVKRLREVAAT---KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 340 ~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
+.||+| +||+||++... +++.||+|.+...... .+.+.+|+.++..+ +||||+++++++...+..++|+||+.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l-~h~niv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFF-RHPNIMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCcceEeeeEecCCceEEEEeccc
Confidence 456776 89999999965 7899999998654322 35678888888888 89999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC---
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF--- 490 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~--- 490 (627)
+|++.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.++++||+.+.....
T Consensus 83 ~~~l~~~l~~~~---~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~ 156 (328)
T cd08226 83 YGSANSLLKTYF---PEGMSEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQ 156 (328)
T ss_pred CCCHHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCc
Confidence 999999988653 235889999999999999999999988 99999999999999999999999985432211
Q ss_pred --------CCCCCCCccccCccccCCC--CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHH----------
Q 006884 491 --------PTTATRTIGYRAPEVTETR--KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVR---------- 550 (627)
Q Consensus 491 --------~~~~~~t~~y~aPE~~~~~--~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~---------- 550 (627)
.....++..|+|||++.+. .++.++||||||+++|||++|+.||........ ......
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~ 234 (328)
T cd08226 157 KAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQM--LLQKLKGPPYSPLDIT 234 (328)
T ss_pred cccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHH--HHHHhcCCCCCCcccc
Confidence 0111235569999998763 478999999999999999999999975432110 000000
Q ss_pred ------HH----------------hhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHh
Q 006884 551 ------SV----------------VREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR--MIEQ 606 (627)
Q Consensus 551 ------~~----------------~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~--~L~~ 606 (627)
.. ..........+..+ ...........+.+++.+||+.+|++|||+.|+++ .++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~ 313 (328)
T cd08226 235 TFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERL-RTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQ 313 (328)
T ss_pred ccchhhhhhccchhhhhcccccchhccccccccccccc-cchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHH
Confidence 00 00000000000000 11112234567889999999999999999999986 4555
Q ss_pred hccccc
Q 006884 607 IQQPEL 612 (627)
Q Consensus 607 ~~~~~~ 612 (627)
++....
T Consensus 314 ~~~~~~ 319 (328)
T cd08226 314 VKEQTQ 319 (328)
T ss_pred HHHhcc
Confidence 555433
No 334
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.2e-32 Score=283.63 Aligned_cols=254 Identities=21% Similarity=0.257 Sum_probs=185.8
Q ss_pred cccCcCCceEEEEEEEcCCcEEEEEEeccc---ccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREV---AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
+.+|.|+++.||++.. +++.||+|++... ....+.+..|++++..+ +|+||+++++++...+..+++|||+++|+
T Consensus 8 ~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 8 KCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQL-QHPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred HhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhc-CCcchhhhhheeecCCeEEEEEeccCCCC
Confidence 4455555555555554 5899999998654 22346789999999999 89999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC-----
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----- 491 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~----- 491 (627)
|.+++.... ...+++.....++.|++.||.|||+++ |+||||||+||+++.++.+||+|||.+......
T Consensus 86 l~~~l~~~~---~~~~~~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 86 CEDLLKTHF---PEGLPELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred HHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence 999998643 235888999999999999999999998 999999999999999999999999988644211
Q ss_pred ------CCCCCCccccCccccCC--CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhh----cc--
Q 006884 492 ------TTATRTIGYRAPEVTET--RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVRE----EW-- 557 (627)
Q Consensus 492 ------~~~~~t~~y~aPE~~~~--~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~----~~-- 557 (627)
....++..|+|||++.. ..++.++||||||+++|||++|+.||....... ...+........ ..
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 237 (314)
T cd08216 160 VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ--MLLEKVRGTVPCLLDKSTYP 237 (314)
T ss_pred ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhccCccccccCchh
Confidence 12235678999999865 358899999999999999999999997532111 000100000000 00
Q ss_pred -----ccc----ccchhh---hcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 558 -----TAE----VFDVEL---LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 558 -----~~~----~~d~~l---~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
... ..+... ...........++.+++.+||..+|++|||+++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 238 LYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred hhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 000 000000 0000111223467788999999999999999999883
No 335
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=5.7e-33 Score=281.88 Aligned_cols=253 Identities=22% Similarity=0.288 Sum_probs=190.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeC--CceeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSK--DEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~--~~~~lv~e~~ 412 (627)
.+.||+|+||.||+|+.. +++.+|+|++.... .....+.+|++++..+ +|+|++++++++... +..++|+||+
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv~e~~ 82 (287)
T cd07840 4 IAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKL-RHPNIVRLKEIVTSKGKGSIYMVFEYM 82 (287)
T ss_pred eEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhc-cCCCeeeheeeEecCCCCcEEEEeccc
Confidence 367999999999999976 48899999997652 2345688899999999 899999999999888 7899999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT 492 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~ 492 (627)
++ +|.+++.... ..+++..+..++.|++.||+|||+.+ ++|+||||+||++++++.+||+|||.+.......
T Consensus 83 ~~-~l~~~~~~~~----~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~ 154 (287)
T cd07840 83 DH-DLTGLLDSPE----VKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYTKRN 154 (287)
T ss_pred cc-cHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccceeeccCCC
Confidence 75 8888886432 36899999999999999999999998 9999999999999999999999999998765432
Q ss_pred -----CCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhc---ccccccc
Q 006884 493 -----TATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREE---WTAEVFD 563 (627)
Q Consensus 493 -----~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d 563 (627)
...++..|+|||.+.+ ..++.++||||||+++|||++|+.||+....... ...+....... ......+
T Consensus 155 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07840 155 SADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQ---LEKIFELCGSPTDENWPGVSK 231 (287)
T ss_pred cccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCCCchhhcccccc
Confidence 2235678999998754 4578999999999999999999999975432110 00010000000 0000000
Q ss_pred --------hhhhcCC----ChHH-HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 564 --------VELLKYQ----DVEE-EMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 564 --------~~l~~~~----~~~~-~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
....... .... +...+.+++.+|+..+|++||+++++++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 232 LPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred chhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 0000000 0001 24567889999999999999999999763
No 336
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=5.1e-33 Score=281.68 Aligned_cols=253 Identities=20% Similarity=0.302 Sum_probs=193.2
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|++|.||++... +++.+++|.+..... ....+..|+++++++ +|+||+++++++...+..++|+||+++
T Consensus 4 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~~ 82 (283)
T cd05118 4 LGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKEL-NHPNIIKLLDVFRHKGDLYLVFEFMDT 82 (283)
T ss_pred ceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHh-cCCCcchHHHhhccCCCEEEEEeccCC
Confidence 367999999999999965 688999999865432 346788899999999 899999999999999999999999975
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC--
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-- 492 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~-- 492 (627)
++.+++.... ..+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||.+.......
T Consensus 83 -~l~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~ 154 (283)
T cd05118 83 -DLYKLIKDRQ----RGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRP 154 (283)
T ss_pred -CHHHHHHhhc----ccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCccc
Confidence 8888887532 36899999999999999999999998 9999999999999999999999999987765432
Q ss_pred --CCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhc---ccccccc---
Q 006884 493 --TATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREE---WTAEVFD--- 563 (627)
Q Consensus 493 --~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d--- 563 (627)
...++..|+|||.+.+. .++.++||||||+++|+|++|+.||...+..+. ........... ......+
T Consensus 155 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd05118 155 YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQ---LFKIFRTLGTPDPEVWPKFTSLAR 231 (283)
T ss_pred ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHcCCCchHhcccchhhhh
Confidence 23456789999998776 789999999999999999999999975432110 00000000000 0000000
Q ss_pred ---hhhhc------CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 564 ---VELLK------YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 564 ---~~l~~------~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
..... ....+....++.+++.+||+.+|.+||++.+++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 232 NYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 00000 00112234567889999999999999999999763
No 337
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=5.7e-33 Score=288.75 Aligned_cols=252 Identities=23% Similarity=0.316 Sum_probs=188.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCH---------------HHHHHHHHHHHHhccCCceeceeeEEeeC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATK---------------REFEQQMEVVGTIGKHSNVVPVRAYYYSK 402 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---------------~~~~~e~~~l~~l~~h~niv~~~~~~~~~ 402 (627)
.+.||+|+||.||+|..+ +++.||||++....... ..+.+|++++..+ +|+||+++++++...
T Consensus 14 ~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~ 92 (335)
T PTZ00024 14 GAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEI-KHENIMGLVDVYVEG 92 (335)
T ss_pred hhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhC-CCcceeeeeEEEecC
Confidence 467999999999999965 68999999986542211 2477899999999 999999999999999
Q ss_pred CceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeec
Q 006884 403 DEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDV 482 (627)
Q Consensus 403 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~Df 482 (627)
+..++||||+. |+|.+++... ..+++.....++.|++.||.|||+.+ ++||||+|+||+++.++.++|+||
T Consensus 93 ~~~~lv~e~~~-~~l~~~l~~~-----~~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~~~~kl~df 163 (335)
T PTZ00024 93 DFINLVMDIMA-SDLKKVVDRK-----IRLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICKIADF 163 (335)
T ss_pred CcEEEEEeccc-cCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCCCCEEECCc
Confidence 99999999996 6899988643 35889999999999999999999998 999999999999999999999999
Q ss_pred ccccccCCC------------------CCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCC
Q 006884 483 GLAHLINFP------------------TTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV 543 (627)
Q Consensus 483 G~a~~~~~~------------------~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~ 543 (627)
|.++..... ....++..|+|||++.+. .++.++||||||+++|||++|+.||...+..+
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-- 241 (335)
T PTZ00024 164 GLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID-- 241 (335)
T ss_pred cceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--
Confidence 998765410 112346789999998764 46899999999999999999999997543211
Q ss_pred CHHHHHHHHhhhc----ccccccchhh-----hcCCC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 544 DLPRWVRSVVREE----WTAEVFDVEL-----LKYQD----VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 544 ~~~~~~~~~~~~~----~~~~~~d~~l-----~~~~~----~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
....+....... +......+.. ..... .......+.+++.+|++.+|++||+++|++.+
T Consensus 242 -~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 242 -QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred -HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 111111111000 0000000000 00000 01123457788999999999999999999874
No 338
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=6e-33 Score=285.19 Aligned_cols=253 Identities=22% Similarity=0.312 Sum_probs=187.5
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeC--CceeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSK--DEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~--~~~~lv~e~~ 412 (627)
.+.||+|+||.||+|..+ +|+.||+|+++.... ....+.+|++++..+ +|+|++++++++... +..++|+||+
T Consensus 12 ~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e~~ 90 (309)
T cd07845 12 LNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNL-RHPNIVELKEVVVGKHLDSIFLVMEYC 90 (309)
T ss_pred eeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhC-CCCCCcceEEEEecCCCCeEEEEEecC
Confidence 367999999999999975 589999999864322 223566799999999 999999999998755 4679999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT 492 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~ 492 (627)
.+ +|.+++.... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||.+.......
T Consensus 91 ~~-~l~~~l~~~~----~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~ 162 (309)
T cd07845 91 EQ-DLASLLDNMP----TPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA 162 (309)
T ss_pred CC-CHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccceeeecCCcc
Confidence 64 8888887542 45899999999999999999999998 9999999999999999999999999998764321
Q ss_pred ----CCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhc---cc------
Q 006884 493 ----TATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREE---WT------ 558 (627)
Q Consensus 493 ----~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~---~~------ 558 (627)
...++..|+|||++.+ ..++.++||||||+++|||++|+.||...+..+ ....+....... ..
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
T cd07845 163 KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIE---QLDLIIQLLGTPNESIWPGFSDL 239 (309)
T ss_pred CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHhcCCCChhhchhhhcc
Confidence 1234677999999865 457899999999999999999999997543211 000010100000 00
Q ss_pred --ccccchhhhcCCCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 559 --AEVFDVELLKYQDV----EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 559 --~~~~d~~l~~~~~~----~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
...+.......... ......+.+++.+|++.||++|||++|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 240 PLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred cccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00000000000000 1123456788999999999999999999864
No 339
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=5.2e-32 Score=274.87 Aligned_cols=251 Identities=22% Similarity=0.320 Sum_probs=190.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhc--cCCceeceeeEEeeCCc-----eeE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIG--KHSNVVPVRAYYYSKDE-----KLV 407 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~--~h~niv~~~~~~~~~~~-----~~l 407 (627)
.+.||+|+||.||+|+.+ +++.||+|++..... ....+.+|++++.++. .|+|++++++++...+. .++
T Consensus 4 ~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l 83 (287)
T cd07838 4 LAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTL 83 (287)
T ss_pred EEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEE
Confidence 367999999999999987 489999999874322 2345667887777774 59999999999988776 899
Q ss_pred EEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccc
Q 006884 408 VYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHL 487 (627)
Q Consensus 408 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~ 487 (627)
+|||+++ +|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||.+..
T Consensus 84 ~~e~~~~-~l~~~l~~~~---~~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 84 VFEHVDQ-DLATYLSKCP---KPGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred Eehhccc-CHHHHHHHcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccCccee
Confidence 9999974 8998887543 235899999999999999999999998 99999999999999999999999999877
Q ss_pred cCCCC---CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhc-------c
Q 006884 488 INFPT---TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREE-------W 557 (627)
Q Consensus 488 ~~~~~---~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~-------~ 557 (627)
..... ...++..|+|||++.+..++.++||||||+++|||++|+.||...... +....+.... +
T Consensus 157 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 230 (287)
T cd07838 157 YSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA------DQLDKIFDVIGLPSEEEW 230 (287)
T ss_pred ccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH------HHHHHHHHHcCCCChHhc
Confidence 64332 233577899999999888999999999999999999999998754321 1111111100 0
Q ss_pred cccc------cchhhhc--CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 558 TAEV------FDVELLK--YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 558 ~~~~------~d~~l~~--~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.... +...... ....++....+.+++.+||+.+|++||+++|++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 231 PRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 0000 0000000 0001122355678899999999999999999975
No 340
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=3.3e-32 Score=283.23 Aligned_cols=259 Identities=23% Similarity=0.359 Sum_probs=191.0
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccc---ccCHHHHHHHHHHHHHhccCCceeceeeEEeeC--CceeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV---AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSK--DEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~--~~~~lv~e~~ 412 (627)
.+.||+|+||.||+|... +++.+|+|++... ......+.+|+.++..+.+|+||+++++++... ...++|+||+
T Consensus 12 ~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~ 91 (337)
T cd07852 12 LQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYM 91 (337)
T ss_pred hHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEeccc
Confidence 477999999999999976 5889999988543 123456778999999998899999999998654 3578999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT 492 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~ 492 (627)
+ ++|..++... .++|..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 92 ~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~ 161 (337)
T cd07852 92 E-TDLHAVIRAN------ILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDCRVKLADFGLARSLSELE 161 (337)
T ss_pred c-cCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccchhcccccc
Confidence 7 5998888642 5789999999999999999999998 9999999999999999999999999987653221
Q ss_pred ---------CCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHh---------
Q 006884 493 ---------TATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVV--------- 553 (627)
Q Consensus 493 ---------~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~--------- 553 (627)
...++..|+|||++.+ ..++.++||||||+++|||++|+.||......+. ........
T Consensus 162 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~ 238 (337)
T cd07852 162 ENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQ---LEKIIEVIGPPSAEDIE 238 (337)
T ss_pred ccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCCCCHHHHH
Confidence 2346788999998754 5578999999999999999999999975432110 00000000
Q ss_pred --hhcccccccc----hhhhc-CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhccc
Q 006884 554 --REEWTAEVFD----VELLK-YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM--IEQIQQP 610 (627)
Q Consensus 554 --~~~~~~~~~d----~~l~~-~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~--L~~~~~~ 610 (627)
........++ ..... .........++.+++.+||+.+|++|||+.+++++ ++.+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~~ 304 (337)
T cd07852 239 SIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHNP 304 (337)
T ss_pred HHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhccC
Confidence 0000000000 00000 00001123467789999999999999999999985 5555443
No 341
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=2.6e-33 Score=264.87 Aligned_cols=194 Identities=25% Similarity=0.434 Sum_probs=166.5
Q ss_pred hcccCcCCceEEEEEEEc---C--CcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEee-CCceeEEE
Q 006884 339 AEVLGKGSYGSTYKAILE---D--GTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYS-KDEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~---~--~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~-~~~~~lv~ 409 (627)
...||+|.||.||+|.-+ + ...+|+|+++.... -....-+|+.+++.+ +|||++.+...+.. +...++++
T Consensus 29 ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl-~h~nvi~Lv~Vfl~~d~~v~l~f 107 (438)
T KOG0666|consen 29 IGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLREL-KHPNVISLVKVFLSHDKKVWLLF 107 (438)
T ss_pred cceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHh-cCCcchhHHHHHhccCceEEEEe
Confidence 467999999999999633 2 33799999976532 234567899999999 99999999988877 67889999
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC----CCeEEeecccc
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD----LNGCISDVGLA 485 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~----~~~ki~DfG~a 485 (627)
||.+. +|.+.++..+......++......|+.|++.|+.|||+.- |+||||||.|||+..+ |.+||+|||++
T Consensus 108 dYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VKIaDlGla 183 (438)
T KOG0666|consen 108 DYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVKIADLGLA 183 (438)
T ss_pred hhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeEeecccHH
Confidence 99987 8999998887766788999999999999999999999998 9999999999999888 99999999999
Q ss_pred cccCCCC-------CCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 006884 486 HLINFPT-------TATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHS 537 (627)
Q Consensus 486 ~~~~~~~-------~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~pf~~~ 537 (627)
+....+. ..+.|++|.|||.+.+. .|+.+.|||+.||++.||+|-++-|.+.
T Consensus 184 R~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~ 243 (438)
T KOG0666|consen 184 RLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGR 243 (438)
T ss_pred HHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccch
Confidence 9876542 23468999999998775 5899999999999999999999888754
No 342
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=2.1e-32 Score=278.25 Aligned_cols=246 Identities=20% Similarity=0.295 Sum_probs=192.7
Q ss_pred hcccCcCCceEEEEEEEc----CCcEEEEEEecccc-----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEE
Q 006884 339 AEVLGKGSYGSTYKAILE----DGTTVVVKRLREVA-----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 409 (627)
.+.||+|++|.||+++.. ++..||||.++... ...+.+..|++++.++.+|+||+++.+.+..+...++||
T Consensus 5 ~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 84 (288)
T cd05583 5 LRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLIL 84 (288)
T ss_pred EEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEE
Confidence 467999999999999843 56889999986432 234568889999999978999999999999899999999
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||+++|+|.+++... ..+++.....++.|+++||.|||+.+ ++||||||+||+++.++.++|+|||+++...
T Consensus 85 e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 156 (288)
T cd05583 85 DYVNGGELFTHLYQR-----EHFTESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (288)
T ss_pred ecCCCCcHHHHHhhc-----CCcCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEEECccccccc
Confidence 999999999998753 35889999999999999999999988 9999999999999999999999999987653
Q ss_pred CCC-----CCCCCccccCccccCCCC--CCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006884 490 FPT-----TATRTIGYRAPEVTETRK--ASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 490 ~~~-----~~~~t~~y~aPE~~~~~~--~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
... ...++..|+|||...+.. .+.++||||||+++|||++|..||...... ...............
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~----- 229 (288)
T cd05583 157 AEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ--NSQSEISRRILKSKP----- 229 (288)
T ss_pred cccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc--chHHHHHHHHHccCC-----
Confidence 322 234678899999987655 788999999999999999999999643211 111121111111110
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 006884 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQ 606 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~ 606 (627)
. ........+.+++.+||+.+|++|||+.++.+.|+.
T Consensus 230 --~-----~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 230 --P-----FPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred --C-----CCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 0 001112345678889999999999999888776655
No 343
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.9e-33 Score=306.23 Aligned_cols=246 Identities=25% Similarity=0.367 Sum_probs=179.5
Q ss_pred CCCHHHHHHHHhcccCcCCceEEEEEEEc-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCC-
Q 006884 328 NFDLEDLLRASAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD- 403 (627)
Q Consensus 328 ~~~~~~l~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~- 403 (627)
--+++|+ ++||+||||.||+++.+ ||+.||||++.... .....+.+|+..++++ +|||||+++..|.+..
T Consensus 478 ~~DFEEL-----~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArL-nHpNVVRYysAWVEs~~ 551 (1351)
T KOG1035|consen 478 LNDFEEL-----ELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARL-NHPNVVRYYSAWVESTA 551 (1351)
T ss_pred hhhhHHH-----HHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhc-CCcceeeeehhhhccCC
Confidence 3456666 78999999999999976 89999999997653 3446788999999999 9999999886652100
Q ss_pred --------------------------------------------------------------------------------
Q 006884 404 -------------------------------------------------------------------------------- 403 (627)
Q Consensus 404 -------------------------------------------------------------------------------- 403 (627)
T Consensus 552 ~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S 631 (1351)
T KOG1035|consen 552 ELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLS 631 (1351)
T ss_pred ccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccc
Confidence
Q ss_pred --------------------------------------ceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHH
Q 006884 404 --------------------------------------EKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTA 445 (627)
Q Consensus 404 --------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia 445 (627)
.+|+=||||+..++.++++++... -.....++++.+|+
T Consensus 632 ~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~----~~~d~~wrLFreIl 707 (1351)
T KOG1035|consen 632 NTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN----SQRDEAWRLFREIL 707 (1351)
T ss_pred cccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc----hhhHHHHHHHHHHH
Confidence 024556777776666666654321 03566788999999
Q ss_pred HHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC----------------------CCCCCCCCccccCc
Q 006884 446 RGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN----------------------FPTTATRTIGYRAP 503 (627)
Q Consensus 446 ~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~----------------------~~~~~~~t~~y~aP 503 (627)
.||.|+|++| ||||||||.||+++.+..+||+|||+|+... ..+...||.-|+||
T Consensus 708 EGLaYIH~~g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAP 784 (1351)
T KOG1035|consen 708 EGLAYIHDQG---IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAP 784 (1351)
T ss_pred HHHHHHHhCc---eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecH
Confidence 9999999999 9999999999999999999999999998721 11234578889999
Q ss_pred cccCCC---CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHH
Q 006884 504 EVTETR---KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQML 580 (627)
Q Consensus 504 E~~~~~---~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~ 580 (627)
|++.+. .|+.|+|+||+|||++||+. ||....+ .... -..++......- . ....+.+..=.
T Consensus 785 Ell~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsME--Ra~i----L~~LR~g~iP~~--~-----~f~~~~~~~e~ 848 (1351)
T KOG1035|consen 785 ELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSME--RASI----LTNLRKGSIPEP--A-----DFFDPEHPEEA 848 (1351)
T ss_pred HHhcccccccccchhhhHHHHHHHHHHhc---cCCchHH--HHHH----HHhcccCCCCCC--c-----ccccccchHHH
Confidence 998764 59999999999999999996 4653211 1111 111122111111 0 01122233345
Q ss_pred HHHHHcccCCCCCCCCHHHHHH
Q 006884 581 QIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 581 ~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
++|.++++.||.+||||.|+++
T Consensus 849 slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 849 SLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred HHHHHHhcCCCccCCCHHHHhh
Confidence 6888999999999999999976
No 344
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=6.3e-33 Score=288.53 Aligned_cols=257 Identities=19% Similarity=0.308 Sum_probs=192.3
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccc---ccCHHHHHHHHHHHHHhccCCceeceeeEEeeC-----CceeEEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV---AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSK-----DEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~-----~~~~lv~ 409 (627)
.+.||+|+||.||+++.. +++.||||.+... ......+.+|++++..+ +|+||+++++++... ...++|+
T Consensus 10 ~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~ni~~~~~~~~~~~~~~~~~~~lv~ 88 (337)
T cd07858 10 IKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHL-DHENVIAIKDIMPPPHREAFNDVYIVY 88 (337)
T ss_pred EEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhc-CCCCccchHHheecccccccCcEEEEE
Confidence 367999999999999965 6899999998653 22345677899999999 999999999987644 3479999
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||+. ++|.+++... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++...
T Consensus 89 e~~~-~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 159 (337)
T cd07858 89 ELMD-TDLHQIIRSS-----QTLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLARTTS 159 (337)
T ss_pred eCCC-CCHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcCccccccC
Confidence 9995 6898888643 35899999999999999999999998 9999999999999999999999999998764
Q ss_pred CC----CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhh---------
Q 006884 490 FP----TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVRE--------- 555 (627)
Q Consensus 490 ~~----~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~--------- 555 (627)
.. ....++..|+|||.+.. ..++.++||||||+++|+|++|+.||...+... ...........
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 236 (337)
T cd07858 160 EKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVH---QLKLITELLGSPSEEDLGFI 236 (337)
T ss_pred CCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHH---HHHHHHHHhCCCChHHhhhc
Confidence 33 23346788999998764 468899999999999999999999997542110 00000000000
Q ss_pred --ccccc-------ccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhccc
Q 006884 556 --EWTAE-------VFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM--IEQIQQP 610 (627)
Q Consensus 556 --~~~~~-------~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~--L~~~~~~ 610 (627)
..... ..+..... ..+....++.+++.+||+.+|++|||++|++++ ++.+...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~ 300 (337)
T cd07858 237 RNEKARRYIRSLPYTPRQSFAR--LFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDP 300 (337)
T ss_pred CchhhhHHHHhcCcccccCHHH--HcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCc
Confidence 00000 00000000 001223456789999999999999999999987 7666444
No 345
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=2.3e-32 Score=286.18 Aligned_cols=253 Identities=21% Similarity=0.302 Sum_probs=187.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeC------CceeEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSK------DEKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~------~~~~lv 408 (627)
.+.||+|+||.||++... +++.||+|++.... ...+.+.+|++++.++ +|+||+++++++... ...++|
T Consensus 21 ~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~lv 99 (353)
T cd07850 21 LKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLV-NHKNIIGLLNVFTPQKSLEEFQDVYLV 99 (353)
T ss_pred EEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhc-CCCCCcceeeeeccCCCccccCcEEEE
Confidence 467999999999999965 68999999986432 2235677899999999 999999999988643 246899
Q ss_pred EecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 409 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
+||+. ++|.+.+.. .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 100 ~e~~~-~~l~~~~~~-------~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~ 168 (353)
T cd07850 100 MELMD-ANLCQVIQM-------DLDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 168 (353)
T ss_pred EeccC-CCHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCccceeC
Confidence 99995 588887753 2788899999999999999999998 999999999999999999999999999876
Q ss_pred CCCC---CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCC---------CHHHHHHH-----
Q 006884 489 NFPT---TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV---------DLPRWVRS----- 551 (627)
Q Consensus 489 ~~~~---~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~---------~~~~~~~~----- 551 (627)
.... ...++..|+|||.+.+..++.++||||||+++|+|++|+.||...+..+.. ...++...
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (353)
T cd07850 169 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTV 248 (353)
T ss_pred CCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhh
Confidence 4432 234678899999999999999999999999999999999999754321100 00000000
Q ss_pred --Hhhhccc------ccccchhhhc---CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 552 --VVREEWT------AEVFDVELLK---YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 552 --~~~~~~~------~~~~d~~l~~---~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
....... ...+...... ..........+.+++.+|++.||++|||+.|++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 249 RNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred hHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000000 0000000000 00011224456788999999999999999999974
No 346
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=8e-33 Score=287.69 Aligned_cols=256 Identities=20% Similarity=0.320 Sum_probs=188.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeC-----CceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSK-----DEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~-----~~~~lv~e 410 (627)
.+.||+|+||.||+|+.. +++.||+|.+.... .....+.+|+.++..+ +|+||+++++++... ...++|+|
T Consensus 10 ~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~e 88 (336)
T cd07849 10 LSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRF-KHENIIGILDIIRPPSFESFNDVYIVQE 88 (336)
T ss_pred EEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhC-CCCCcCchhheeecccccccceEEEEeh
Confidence 478999999999999864 68999999986432 2345678899999999 899999999887644 34789999
Q ss_pred cCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC
Q 006884 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF 490 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 490 (627)
|+.+ +|..++.. ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 89 ~~~~-~l~~~~~~------~~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~ 158 (336)
T cd07849 89 LMET-DLYKLIKT------QHLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLARIADP 158 (336)
T ss_pred hccc-CHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEECcccceeeccc
Confidence 9964 88777753 35899999999999999999999998 99999999999999999999999999876532
Q ss_pred CC-------CCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccc---c
Q 006884 491 PT-------TATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWT---A 559 (627)
Q Consensus 491 ~~-------~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~---~ 559 (627)
.. ...++..|+|||++.+ ..++.++||||||+++|+|++|+.||...+... ........+..... .
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~---~~~~~~~~~~~~~~~~~~ 235 (336)
T cd07849 159 EHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLH---QLNLILGVLGTPSQEDLN 235 (336)
T ss_pred cccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHcCCCCHHHHH
Confidence 21 2346788999998654 568899999999999999999999997532110 01111110100000 0
Q ss_pred cccch-------hhhcCCC------hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhc
Q 006884 560 EVFDV-------ELLKYQD------VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM--IEQIQ 608 (627)
Q Consensus 560 ~~~d~-------~l~~~~~------~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~--L~~~~ 608 (627)
.+.+. ....... .+....++.+++.+||+.+|++|||+.|++++ ++...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~ 299 (336)
T cd07849 236 CIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH 299 (336)
T ss_pred HhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence 00000 0000000 01123457789999999999999999999986 55544
No 347
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=3.9e-32 Score=275.39 Aligned_cols=258 Identities=23% Similarity=0.354 Sum_probs=191.6
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|++|.||+|+.. +++.|+||++..... ......+|+..+.++.+|+|++++++++..++..++||||+ +|
T Consensus 4 ~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~ 82 (283)
T cd07830 4 IKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-EG 82 (283)
T ss_pred heeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-CC
Confidence 467999999999999976 478899999875433 23345678888999944999999999999999999999999 88
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---C
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---T 492 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~---~ 492 (627)
+|.+++.... ...+++..+..++.|++.+|.|||+.+ ++|+||+|+||++++++.++|+|||.+...... .
T Consensus 83 ~l~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~ 156 (283)
T cd07830 83 NLYQLMKDRK---GKPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYT 156 (283)
T ss_pred CHHHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccceeccCCCCcC
Confidence 9999887643 246899999999999999999999998 999999999999999999999999999866432 2
Q ss_pred CCCCCccccCccccC-CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCC----------CHHHHHHHHhhhcccccc
Q 006884 493 TATRTIGYRAPEVTE-TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV----------DLPRWVRSVVREEWTAEV 561 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~-~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~----------~~~~~~~~~~~~~~~~~~ 561 (627)
...++..|+|||++. ...++.++|+||||+++|||++|+.||......+.. .-..|.............
T Consensus 157 ~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd07830 157 DYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFR 236 (283)
T ss_pred CCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccc
Confidence 234677899999874 456789999999999999999999999654321110 000011100000000000
Q ss_pred cchhhhc--CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 562 FDVELLK--YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 562 ~d~~l~~--~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
+...... ....+.....+.+++.+||+.+|++||+++|++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 237 FPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred ccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 0000000 00001113467789999999999999999999763
No 348
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.4e-32 Score=280.40 Aligned_cols=252 Identities=23% Similarity=0.343 Sum_probs=186.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|++|.||+|..+ +++.||+|.+.... ...+.+.+|+++++++ +|+||+++++++......++|+||++
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~- 84 (294)
T PLN00009 7 VEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEM-QHGNIVRLQDVVHSEKRLYLVFEYLD- 84 (294)
T ss_pred EEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhc-cCCCEeeEEEEEecCCeEEEEEeccc-
Confidence 367999999999999975 68899999886532 2235688899999999 99999999999999999999999996
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC-CCCeEEeecccccccCCC--
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ-DLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~-~~~~ki~DfG~a~~~~~~-- 491 (627)
++|.+++.... ...+++.....++.|++.||+|||+.+ ++||||+|+||+++. ++.+||+|||++......
T Consensus 85 ~~l~~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~ 158 (294)
T PLN00009 85 LDLKKHMDSSP---DFAKNPRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVR 158 (294)
T ss_pred ccHHHHHHhCC---CCCcCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEECCCCEEEEcccccccccCCCcc
Confidence 57888775432 234678888899999999999999998 999999999999985 557899999999765332
Q ss_pred --CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccccc------
Q 006884 492 --TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF------ 562 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 562 (627)
....+++.|+|||++.+ ..++.++||||||+++|+|++|+.||......+ .+..... ..... .....
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~--~~~~~~~-~~~~~-~~~~~~~~~~~ 234 (294)
T PLN00009 159 TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEID--ELFKIFR-ILGTP-NEETWPGVTSL 234 (294)
T ss_pred ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHH-HhCCC-Chhhccccccc
Confidence 22345788999998865 457899999999999999999999997543211 0000000 00000 00000
Q ss_pred -chh--hhc--CCC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 563 -DVE--LLK--YQD----VEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 563 -d~~--l~~--~~~----~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
+.. ... ... .+....++.+++.+|++.+|++||++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 235 PDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred hhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 000 000 0112234677888999999999999999987
No 349
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3.6e-32 Score=276.77 Aligned_cols=243 Identities=21% Similarity=0.336 Sum_probs=189.9
Q ss_pred hcccCcCCceEEEEEEE----cCCcEEEEEEecccc-----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEE
Q 006884 339 AEVLGKGSYGSTYKAIL----EDGTTVVVKRLREVA-----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 409 (627)
.+.||+|+||.||.++. .+|..||+|++.... ...+.+..|++++..+.+|+||+++.+.+..+...++|+
T Consensus 5 ~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (290)
T cd05613 5 LKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLIL 84 (290)
T ss_pred eeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEE
Confidence 36799999999999985 368899999986532 234667889999999978999999999999888899999
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||+++++|.+++... ..+++.....++.|++.||.|||+.+ ++||||+|+||+++.++.+||+|||+++...
T Consensus 85 e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 156 (290)
T cd05613 85 DYINGGELFTHLSQR-----ERFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFH 156 (290)
T ss_pred ecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCccceecc
Confidence 999999999999754 35788999999999999999999998 9999999999999999999999999987654
Q ss_pred CCC-----CCCCCccccCccccCCC--CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006884 490 FPT-----TATRTIGYRAPEVTETR--KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 490 ~~~-----~~~~t~~y~aPE~~~~~--~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
... ...++..|+|||.+... .++.++||||||+++|+|++|+.||...... ................
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~--~~~~~~~~~~~~~~~~---- 230 (290)
T cd05613 157 EDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK--NSQAEISRRILKSEPP---- 230 (290)
T ss_pred cccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc--ccHHHHHHHhhccCCC----
Confidence 321 23467889999998653 4678999999999999999999999743211 1112222111111100
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 006884 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRP-----KMDDVVRM 603 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~ev~~~ 603 (627)
........+.+++.+|++.+|++|| ++++++++
T Consensus 231 --------~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 231 --------YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred --------CCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 0011223566788899999999997 67777663
No 350
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=4e-32 Score=270.80 Aligned_cols=243 Identities=24% Similarity=0.347 Sum_probs=196.3
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||++..+ +++.+++|.+.... ....++.+|+++++.+ +|+||+++.+++......++|+||+++
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~~ 83 (256)
T cd08530 5 LKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASV-NHPNIISYKEAFLDGNKLCIVMEYAPF 83 (256)
T ss_pred eeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhC-CCCCchhhhhhhccCCEEEEEehhcCC
Confidence 467999999999999855 67899999987543 2345678899999999 899999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--C
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--T 492 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--~ 492 (627)
++|.+++..... ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+|++|||+++..... .
T Consensus 84 ~~L~~~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~ 159 (256)
T cd08530 84 GDLSKAISKRKK-KRKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAK 159 (256)
T ss_pred CCHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccchhhhccCCcc
Confidence 999999876322 2346899999999999999999999998 999999999999999999999999999776443 2
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
...++..|+|||.+.+..++.++|+||||+++|||++|+.||...+.. ....... ..... ...
T Consensus 160 ~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~------~~~~~~~-~~~~~----------~~~ 222 (256)
T cd08530 160 TQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ------DLRYKVQ-RGKYP----------PIP 222 (256)
T ss_pred cccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHh-cCCCC----------CCc
Confidence 234678899999999988999999999999999999999999754311 1111111 11100 011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.....++.+++.+|+..+|++||++.|++++
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 223 PIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred hhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 2334567889999999999999999999764
No 351
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=5.2e-32 Score=269.53 Aligned_cols=238 Identities=24% Similarity=0.430 Sum_probs=194.0
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|++|.||++..+ +++.|++|.+..... ..+.+.+|++++.++ +|+|++++++++......++++||+++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~~ 83 (254)
T cd06627 5 GDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNL-KHPNIVKYIGSIETSDSLYIILEYAEN 83 (254)
T ss_pred eeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhC-CCCCccEEEEEEEeCCEEEEEEecCCC
Confidence 468999999999999865 578999999876543 346788999999999 899999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCC-
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTT- 493 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~- 493 (627)
++|.+++... ..+++..+..++.|++.|+.|||+.+ |+||||||+||+++.++.++|+|||.+........
T Consensus 84 ~~L~~~~~~~-----~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 155 (254)
T cd06627 84 GSLRQIIKKF-----GPFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD 155 (254)
T ss_pred CcHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccceecCCCccc
Confidence 9999998754 35899999999999999999999998 99999999999999999999999999987654332
Q ss_pred ---CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 494 ---ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 494 ---~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
..++..|+|||...+..++.++||||+|+++|+|++|+.||..... ..... ...... ...+.
T Consensus 156 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~-----~~~~~-~~~~~~--~~~~~------- 220 (254)
T cd06627 156 DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP-----MAALF-RIVQDD--HPPLP------- 220 (254)
T ss_pred ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH-----HHHHH-HHhccC--CCCCC-------
Confidence 3467889999999888889999999999999999999999974321 11111 111100 00000
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
......+.+++.+|+..+|++||++.|++.
T Consensus 221 --~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 221 --EGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred --CCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 111235667888999999999999999975
No 352
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-33 Score=290.20 Aligned_cols=271 Identities=21% Similarity=0.303 Sum_probs=201.3
Q ss_pred hcccCcCCceEEEEEEE-cCCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCC------ceeEEE
Q 006884 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD------EKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~------~~~lv~ 409 (627)
.+.||+||||.||+|+. ..|+.||||.++... ...+...+|+++++++ +|+|||++++.=++.. ...+||
T Consensus 18 ~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKL-nh~NIVk~f~iee~~~~~~~~~~~vlvm 96 (732)
T KOG4250|consen 18 DERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKL-NHPNIVKLFDIEETKFLGLVTRLPVLVM 96 (732)
T ss_pred hhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHc-CchhhhhhcccCCccccCcccccceEEE
Confidence 46799999999999994 479999999998753 3456788999999999 7999999998755433 467999
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEec--CCC--CeEEeecccc
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLT--QDL--NGCISDVGLA 485 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~--~~~--~~ki~DfG~a 485 (627)
|||.+|||...+.+-. ....+++.+.+.+..+++.||.|||+++ |+||||||.||++- .+| .-||+|||.|
T Consensus 97 EyC~gGsL~~~L~~PE--N~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 97 EYCSGGSLRKVLNSPE--NAYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred eecCCCcHHHHhcCcc--cccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 9999999999997533 3457999999999999999999999998 99999999999984 233 3599999999
Q ss_pred cccCCCC---CCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccc
Q 006884 486 HLINFPT---TATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEV 561 (627)
Q Consensus 486 ~~~~~~~---~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (627)
+.+.... +..||..|.+||.... +.|+..+|.|||||++||+.||..||......... .+..+..........+
T Consensus 172 rel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~--~~~~~~~~tkkp~~v~ 249 (732)
T KOG4250|consen 172 RELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNN--KEIMWHIITKKPSGVA 249 (732)
T ss_pred ccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCcccc--chhhhhhhccCCCcee
Confidence 9987654 4569999999999984 88999999999999999999999999754332111 0111111111111000
Q ss_pred c--ch----------hhhcCC-ChHHHHHHHHHHHHHcccCCCCCCC--CHHHHHHHHHhhcccccccCCC
Q 006884 562 F--DV----------ELLKYQ-DVEEEMVQMLQIALSCVAKVPDSRP--KMDDVVRMIEQIQQPELRNRAS 617 (627)
Q Consensus 562 ~--d~----------~l~~~~-~~~~~~~~l~~l~~~Cl~~~P~~RP--s~~ev~~~L~~~~~~~~~~~~~ 617 (627)
+ +. .+.... -.......+-+.+..++..+|++|- ...+....+..|........++
T Consensus 250 i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~~vvhiFs 320 (732)
T KOG4250|consen 250 IGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNLKVVHIFS 320 (732)
T ss_pred EeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhhheeEEEe
Confidence 0 00 011000 0112223344566677788999998 8888888888877766655554
No 353
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-32 Score=284.16 Aligned_cols=238 Identities=19% Similarity=0.356 Sum_probs=195.5
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
...||+|.|+.|..++.. .+..||||.+.+..- ..+.+.+|+++|..+ +|||||+++.+......+|+||||+.+
T Consensus 61 ~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l-~HPnIvkl~~v~~t~~~lylV~eya~~ 139 (596)
T KOG0586|consen 61 IKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSL-NHPNIVKLFSVIETEATLYLVMEYASG 139 (596)
T ss_pred eeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhc-CCcceeeeeeeeeecceeEEEEEeccC
Confidence 467999999999999965 689999999987643 234588999999999 999999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
|.+++|+.++. ......+..++.|+..|++|||+++ |+|||||++|||++.+.++||+|||++..+...
T Consensus 140 ge~~~yl~~~g-----r~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~l 211 (596)
T KOG0586|consen 140 GELFDYLVKHG-----RMKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFGFSTFFDYGLML 211 (596)
T ss_pred chhHHHHHhcc-----cchhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeeccccceeecccccc
Confidence 99999998763 3445888899999999999999998 999999999999999999999999999887643
Q ss_pred CCCCCCccccCccccCCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 492 TTATRTIGYRAPEVTETRKA-SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
.+..|++.|.|||++.+..| .+.+|+||+|+++|-|+.|..||++..-.+..+ ..++.. +.-..
T Consensus 212 qt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~------rvl~gk---------~rIp~ 276 (596)
T KOG0586|consen 212 QTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRP------RVLRGK---------YRIPF 276 (596)
T ss_pred cccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccc------hheeee---------ecccc
Confidence 56789999999999999887 588999999999999999999999754322110 001000 00001
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.... +.-+++++++-.+|.+|++++++.+.
T Consensus 277 ~ms~---dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 277 YMSC---DCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred eeec---hhHHHHHHhhccCccccCCHHHhhhh
Confidence 1111 23457778889999999999999874
No 354
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-32 Score=291.51 Aligned_cols=243 Identities=23% Similarity=0.365 Sum_probs=205.3
Q ss_pred hcccCcCCceEEEEEE-EcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEee-----CCceeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAI-LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS-----KDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~-----~~~~~lv~e~~ 412 (627)
.+.||.|.+|.||+++ .++++.+|+|++......+++++.|.++++.+..|||++.++|++.. ++++++|||||
T Consensus 24 ~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC 103 (953)
T KOG0587|consen 24 IEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFC 103 (953)
T ss_pred EEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeecc
Confidence 5789999999999999 45789999999988888889999999999999999999999999873 57899999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC---
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN--- 489 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~--- 489 (627)
.+|+..+.++... +..+.|....-|+..++.|+.+||... ++|||||-.|||+++++.+|++|||.+..++
T Consensus 104 ~gGSVTDLVKn~~---g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~ 177 (953)
T KOG0587|consen 104 GGGSVTDLVKNTK---GNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTV 177 (953)
T ss_pred CCccHHHHHhhhc---ccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcEEEeeeeeeeeeeccc
Confidence 9999999998765 578999999999999999999999987 9999999999999999999999999998764
Q ss_pred -CCCCCCCCccccCccccCCC-----CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006884 490 -FPTTATRTIGYRAPEVTETR-----KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 490 -~~~~~~~t~~y~aPE~~~~~-----~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
...+..||+.|||||++... .|+..+|+||+|++..||-.|.+|+.++.... .+-.+.+. ..
T Consensus 178 grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr------aLF~IpRN------PP 245 (953)
T KOG0587|consen 178 GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR------ALFLIPRN------PP 245 (953)
T ss_pred ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh------hhccCCCC------CC
Confidence 34677899999999998653 46788999999999999999999987654221 11111111 11
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 564 VELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
+. ........++|.++|..|+.+|-++||++.++++
T Consensus 246 Pk---Lkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 246 PK---LKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred cc---ccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 12 2234556678888999999999999999999876
No 355
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=8.2e-33 Score=287.36 Aligned_cols=259 Identities=21% Similarity=0.333 Sum_probs=190.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEee----CCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYS----KDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~----~~~~~lv~e 410 (627)
.+.||+|+||.||+|..+ +++.||+|++.... ...+.+.+|++++..+ +||||+++.+++.. ....++|+|
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~lv~e 88 (334)
T cd07855 10 IENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHF-KHDNIIAIRDILRPPGADFKDVYVVMD 88 (334)
T ss_pred eeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhc-CCCCccCHHHhccccCCCCceEEEEEe
Confidence 367999999999999965 68999999987542 2345677899999999 89999999988753 346789999
Q ss_pred cCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC
Q 006884 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF 490 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 490 (627)
|+. |+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||++.....
T Consensus 89 ~~~-~~l~~~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 159 (334)
T cd07855 89 LME-SDLHHIIHSD-----QPLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARGLSS 159 (334)
T ss_pred hhh-hhHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEecccccceeecc
Confidence 995 6898888643 34899999999999999999999998 99999999999999999999999999876532
Q ss_pred C--------CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhh-------
Q 006884 491 P--------TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVR------- 554 (627)
Q Consensus 491 ~--------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~------- 554 (627)
. ....++..|+|||.+.. ..++.++||||||+++|||++|+.||...+.... ...+.....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~---~~~~~~~~g~~~~~~~ 236 (334)
T cd07855 160 SPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQ---LKLILSVLGSPSEEVL 236 (334)
T ss_pred cCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHH---HHHHHHHhCCChhHhh
Confidence 2 12346788999998765 4688999999999999999999999976432110 000000000
Q ss_pred ----hcccccccch-hhhcCCC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhccc
Q 006884 555 ----EEWTAEVFDV-ELLKYQD----VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM--IEQIQQP 610 (627)
Q Consensus 555 ----~~~~~~~~d~-~l~~~~~----~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~--L~~~~~~ 610 (627)
........+. ....... .+....++.+++.+|++.+|++||++.+++.+ +++....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~ 303 (334)
T cd07855 237 NRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDP 303 (334)
T ss_pred hhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCC
Confidence 0000000000 0000000 01224567889999999999999999999883 4444433
No 356
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.3e-31 Score=267.06 Aligned_cols=243 Identities=20% Similarity=0.375 Sum_probs=197.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||++... ++..+++|++.... ...+++.+|++++..+ +|+|++++.+.+...+..++|+||+++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~lv~e~~~~ 83 (258)
T cd08215 5 IKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKL-NHPNIIKYYESFEEKGKLCIVMEYADG 83 (258)
T ss_pred EeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhc-CCCChhheEEEEecCCEEEEEEEecCC
Confidence 367999999999999965 68899999987543 3456788899999999 899999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC--
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-- 492 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~-- 492 (627)
++|.+++..... ....+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+.......
T Consensus 84 ~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~ 159 (258)
T cd08215 84 GDLSQKIKKQKK-EGKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDL 159 (258)
T ss_pred CcHHHHHHHhhc-cCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccceeecccCcce
Confidence 999999986431 2357899999999999999999999998 9999999999999999999999999987764432
Q ss_pred --CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 493 --TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 493 --~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
...+++.|+|||...+..++.++||||+|+++++|++|+.||.... ..+......... ... +.
T Consensus 160 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~------~~~~~~~~~~~~-~~~-----~~--- 224 (258)
T cd08215 160 AKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN------LLELALKILKGQ-YPP-----IP--- 224 (258)
T ss_pred ecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc------HHHHHHHHhcCC-CCC-----CC---
Confidence 2346778999999988889999999999999999999999996542 122222221111 100 00
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
......+.+++.+||..+|++||++.|++++
T Consensus 225 --~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 225 --SQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred --CCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1122456778889999999999999999763
No 357
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-34 Score=313.05 Aligned_cols=239 Identities=24% Similarity=0.373 Sum_probs=189.4
Q ss_pred hcccCcCCceEEEEEEE-cCCcEEEEEEeccc---ccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREV---AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
..+||.|.||.||.+.. .+|...|+|-++-. ....+.+.+|+.++..+ +|||+|+++|.=...+..++.||||++
T Consensus 1240 g~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~l-nHpNlV~YyGVEvHRekv~IFMEyC~~ 1318 (1509)
T KOG4645|consen 1240 GNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGL-NHPNLVRYYGVEVHREKVYIFMEYCEG 1318 (1509)
T ss_pred ccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhc-cCccccccCceeecHHHHHHHHHHhcc
Confidence 56899999999999994 46888999977543 23346688899999999 999999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC--
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-- 492 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~-- 492 (627)
|+|.+.+...+ ..++.....+..|++.|+.|||++| ||||||||.||+++.+|.+|++|||.|..+..+.
T Consensus 1319 GsLa~ll~~gr-----i~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~ 1390 (1509)
T KOG4645|consen 1319 GSLASLLEHGR-----IEDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQT 1390 (1509)
T ss_pred CcHHHHHHhcc-----hhhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeecccceeEecCchhc
Confidence 99999998643 4666667778899999999999999 9999999999999999999999999998875542
Q ss_pred ------CCCCCccccCccccCCC---CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006884 493 ------TATRTIGYRAPEVTETR---KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 493 ------~~~~t~~y~aPE~~~~~---~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
...||+.|||||++.+. ....++||||+|||..||+||+.||...+.+ |.- ++.
T Consensus 1391 ~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne-------~aI----------My~ 1453 (1509)
T KOG4645|consen 1391 MPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE-------WAI----------MYH 1453 (1509)
T ss_pred CCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch-------hHH----------HhH
Confidence 23589999999999764 3567899999999999999999999865432 110 001
Q ss_pred hhhhcCCChHH-HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 564 VELLKYQDVEE-EMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 564 ~~l~~~~~~~~-~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
......+..++ -..+-.+++.+|+..||++|.++.|++++
T Consensus 1454 V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1454 VAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred HhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 11111111111 22234566779999999999888877653
No 358
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=2.6e-32 Score=279.44 Aligned_cols=253 Identities=22% Similarity=0.304 Sum_probs=186.9
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCC----------c
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD----------E 404 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~----------~ 404 (627)
.+.||+|+||.||+|..+ +++.||+|+++... .....+.+|++++.++ +|||++++++++.+.. .
T Consensus 12 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l-~h~~i~~~~~~~~~~~~~~~~~~~~~~ 90 (302)
T cd07864 12 IGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQL-NHRNIVNLKEIVTDKQDALDFKKDKGA 90 (302)
T ss_pred eeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhC-CCCCeeeeeheecCcchhhhccccCCc
Confidence 467999999999999976 58899999986532 2345678899999999 9999999999987654 6
Q ss_pred eeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccc
Q 006884 405 KLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGL 484 (627)
Q Consensus 405 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~ 484 (627)
.++|+||+++ ++..++... ...+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||.
T Consensus 91 ~~lv~e~~~~-~l~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~kl~dfg~ 162 (302)
T cd07864 91 FYLVFEYMDH-DLMGLLESG----LVHFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNNKGQIKLADFGL 162 (302)
T ss_pred EEEEEcccCc-cHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCcEEeCcccc
Confidence 8899999976 677776543 235899999999999999999999998 99999999999999999999999999
Q ss_pred ccccCCCC-----CCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006884 485 AHLINFPT-----TATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 485 a~~~~~~~-----~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
+....... ...++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... .....+.........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~---~~~~~~~~~~~~~~~ 239 (302)
T cd07864 163 ARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQEL---AQLELISRLCGSPCP 239 (302)
T ss_pred cccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHHHhCCCCh
Confidence 98664322 1234678999998764 45789999999999999999999999753211 111111111100000
Q ss_pred ---ccc--------cchhhhc----CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 559 ---AEV--------FDVELLK----YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 559 ---~~~--------~d~~l~~----~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
..+ .+..... ..........+.+++.+||+.+|.+||++.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 240 AVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred hhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000 0000000 00000113457788899999999999999999753
No 359
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.9e-32 Score=285.52 Aligned_cols=256 Identities=22% Similarity=0.325 Sum_probs=189.9
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCC------ceeEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD------EKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~------~~~lv 408 (627)
.+.||+|+||.||+|+.. +++.||+|++.... .....+.+|++++..+ +|+||+++++++.... ..++|
T Consensus 20 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~~lv 98 (342)
T cd07879 20 LKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHM-QHENVIGLLDVFTSAVSGDEFQDFYLV 98 (342)
T ss_pred EEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhc-CCCCccchhheecccccCCCCceEEEE
Confidence 468999999999999964 68999999986532 2245678899999999 9999999999987543 45899
Q ss_pred EecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 409 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
+||+.. +|..+.. ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++..
T Consensus 99 ~e~~~~-~l~~~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~~~~kL~dfg~~~~~ 167 (342)
T cd07879 99 MPYMQT-DLQKIMG-------HPLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFGLARHA 167 (342)
T ss_pred eccccc-CHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCCCCcCC
Confidence 999864 6766542 24889999999999999999999998 999999999999999999999999998765
Q ss_pred CCCC-CCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhh------------
Q 006884 489 NFPT-TATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVR------------ 554 (627)
Q Consensus 489 ~~~~-~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~------------ 554 (627)
.... ...++..|+|||++.+ ..++.++||||||+++|||++|+.||....... .+..+..
T Consensus 168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~------~~~~~~~~~~~~~~~~~~~ 241 (342)
T cd07879 168 DAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD------QLTQILKVTGVPGPEFVQK 241 (342)
T ss_pred CCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHHhcCCCCHHHHHH
Confidence 4322 2346778999999866 468899999999999999999999997543211 0111000
Q ss_pred --hcccccccch-hhhcCCC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhccccc
Q 006884 555 --EEWTAEVFDV-ELLKYQD----VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM--IEQIQQPEL 612 (627)
Q Consensus 555 --~~~~~~~~d~-~l~~~~~----~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~--L~~~~~~~~ 612 (627)
.......... ....... .+.....+.+++.+||+.+|++||++++++.+ ++.++....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~~~ 308 (342)
T cd07879 242 LEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDADE 308 (342)
T ss_pred hcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccccc
Confidence 0000000000 0000000 01122356788999999999999999999964 777765433
No 360
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.4e-31 Score=277.76 Aligned_cols=258 Identities=21% Similarity=0.314 Sum_probs=197.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCC-----ceeEEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD-----EKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~-----~~~lv~ 409 (627)
.+.||+|+||.||+|+.. +++.||+|++.... ...+.+.+|+++++.+ +|+||+++.+++...+ ..+++|
T Consensus 5 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~~~~lv~ 83 (330)
T cd07834 5 LKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHL-RHENIIGLLDILRPPSPEDFNDVYIVT 83 (330)
T ss_pred eeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhc-CCcchhhhhhhhcccCcccccceEEEe
Confidence 467999999999999975 48999999987543 2346788999999999 8999999999988765 789999
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||++ ++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||.+....
T Consensus 84 e~~~-~~l~~~l~~~-----~~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 84 ELME-TDLHKVIKSP-----QPLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARGVD 154 (330)
T ss_pred cchh-hhHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCceEeec
Confidence 9997 4888888643 26899999999999999999999998 9999999999999999999999999998764
Q ss_pred CCC-------CCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhc--ccc
Q 006884 490 FPT-------TATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREE--WTA 559 (627)
Q Consensus 490 ~~~-------~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~ 559 (627)
... ...++..|+|||++.+. .++.++||||||+++|+|++|+.||......+ ....+.... ...
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~------~~~~i~~~~~~~~~ 228 (330)
T cd07834 155 PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYID------QLNLIVEVLGTPSE 228 (330)
T ss_pred ccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHH------HHHHHHHhcCCCCh
Confidence 432 23457789999999887 78999999999999999999999997654211 111111000 000
Q ss_pred c---------ccc--hhhhcCC------ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhccccc
Q 006884 560 E---------VFD--VELLKYQ------DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM--IEQIQQPEL 612 (627)
Q Consensus 560 ~---------~~d--~~l~~~~------~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~--L~~~~~~~~ 612 (627)
+ ..+ ....... ..+.....+.+++.+||+.+|++||++++++.+ ++.++....
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~~ 300 (330)
T cd07834 229 EDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPED 300 (330)
T ss_pred hHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccccc
Confidence 0 000 0000000 001123457788999999999999999999984 777766543
No 361
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-32 Score=267.65 Aligned_cols=250 Identities=22% Similarity=0.353 Sum_probs=197.4
Q ss_pred hcccCcCCceEEEEEEEcC------CcEEEEEEecccccC--HHHHHHHHHHHHHhccCCceeceeeEEeeC-CceeEEE
Q 006884 339 AEVLGKGSYGSTYKAILED------GTTVVVKRLREVAAT--KREFEQQMEVVGTIGKHSNVVPVRAYYYSK-DEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~--~~~~~~e~~~l~~l~~h~niv~~~~~~~~~-~~~~lv~ 409 (627)
.-++-+|.||+||.|.+++ .+.|.+|.++..... -..+..|.-.+..+ .|||+.++.+.+.++ +..+++|
T Consensus 289 ~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~-sH~nll~V~~V~ie~~~~P~V~y 367 (563)
T KOG1024|consen 289 SCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGA-SHPNLLSVLGVSIEDYATPFVLY 367 (563)
T ss_pred hhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcC-cCCCccceeEEEeeccCcceEEE
Confidence 3467899999999997653 445777777654332 23466666666666 799999999998765 4678899
Q ss_pred ecCCCCcHHHHhhhcCCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccc
Q 006884 410 SYMPAGSLFMLLHRNRSD---GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH 486 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 486 (627)
.++.-|+|..||...+.+ ..+.++-.+...++.|++.|++|||.++ +||.||.++|.+||+...+||+|=.+++
T Consensus 368 ~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~---ViHkDiAaRNCvIdd~LqVkltDsaLSR 444 (563)
T KOG1024|consen 368 PATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG---VIHKDIAARNCVIDDQLQVKLTDSALSR 444 (563)
T ss_pred eccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC---cccchhhhhcceehhheeEEeccchhcc
Confidence 999999999999854432 2456777888999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCC------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccc
Q 006884 487 LINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTA 559 (627)
Q Consensus 487 ~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 559 (627)
.+.+.+ ....+..||+||.+....|+..+|||||||+||||+| |+.||.+.+..+ +...+.++..
T Consensus 445 DLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfE-------m~~ylkdGyR- 516 (563)
T KOG1024|consen 445 DLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFE-------MEHYLKDGYR- 516 (563)
T ss_pred ccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHH-------HHHHHhccce-
Confidence 875543 3345778999999999999999999999999999999 999998654322 2223333221
Q ss_pred cccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006884 560 EVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 560 ~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 609 (627)
+ .....+..+++.+|..||+..|++||+++|++..|.++..
T Consensus 517 ------l---aQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ 557 (563)
T KOG1024|consen 517 ------L---AQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHT 557 (563)
T ss_pred ------e---cCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 1 1223445577888999999999999999999999998753
No 362
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.2e-31 Score=266.43 Aligned_cols=231 Identities=24% Similarity=0.326 Sum_probs=188.2
Q ss_pred cCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 342 LGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 342 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
||+|+||.||++... +++.+|+|.+..... ....+..|+++++.+ +|+|++++++.+..+...++||||+++++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 79 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRI-NHPFIVKLHYAFQTEEKLYLVLEYAPGGE 79 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHc-CCCcHHHHHHHeecCCeeEEEEecCCCCc
Confidence 699999999999976 588999999875432 345788899999999 89999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----C
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----T 492 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~----~ 492 (627)
|.+++.... .+++.....++.|++.|+.|||+.+ ++|+||+|+||+++.++.++|+|||.+...... .
T Consensus 80 L~~~l~~~~-----~l~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~ 151 (250)
T cd05123 80 LFSHLSKEG-----RFSEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTN 151 (250)
T ss_pred HHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCCCcEEEeecCcceecccCCCccc
Confidence 999997542 5899999999999999999999988 999999999999999999999999998766432 2
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
...++..|+|||...+...+.++|+||||+++||+++|+.||..... ............ .....
T Consensus 152 ~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~------~~~~~~~~~~~~---------~~~~~- 215 (250)
T cd05123 152 TFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR------KEIYEKILKDPL---------RFPEF- 215 (250)
T ss_pred CCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHhcCCC---------CCCCC-
Confidence 33467889999999888889999999999999999999999965422 111222211110 00011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHH
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDD 599 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~e 599 (627)
....+.+++.+||..+|++||++.+
T Consensus 216 --~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 216 --LSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred --CCHHHHHHHHHHhcCCHhhCCCccc
Confidence 1235667888999999999999944
No 363
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-33 Score=272.60 Aligned_cols=245 Identities=20% Similarity=0.327 Sum_probs=188.2
Q ss_pred hcccCcCCceEEEEEEE-cCCcEEEEEEecccccCH--------HHHHHHHHHHHHhccCCceeceeeEEeeC-CceeEE
Q 006884 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVAATK--------REFEQQMEVVGTIGKHSNVVPVRAYYYSK-DEKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--------~~~~~e~~~l~~l~~h~niv~~~~~~~~~-~~~~lv 408 (627)
..+||+|||+.||++.+ ...+.||||+-.....++ +...+|..+-+.| .||.||++++|+.-+ +..+-|
T Consensus 468 LhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeL-DHpRIVKlYDyfslDtdsFCTV 546 (775)
T KOG1151|consen 468 LHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKEL-DHPRIVKLYDYFSLDTDSFCTV 546 (775)
T ss_pred HHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhcc-Ccceeeeeeeeeeeccccceee
Confidence 46799999999999984 457889999865443332 3466788898899 999999999999754 567789
Q ss_pred EecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC---CCCeEEeecccc
Q 006884 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ---DLNGCISDVGLA 485 (627)
Q Consensus 409 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~---~~~~ki~DfG~a 485 (627)
.||++|.+|.-||+.++ .+++.++..|+.||+.||.||.+.. +||||-||||.|||+.. -|.+||.|||++
T Consensus 547 LEYceGNDLDFYLKQhk-----lmSEKEARSIiMQiVnAL~YLNEik-pPIIHYDLKPgNILLv~GtacGeIKITDFGLS 620 (775)
T KOG1151|consen 547 LEYCEGNDLDFYLKQHK-----LMSEKEARSIIMQIVNALKYLNEIK-PPIIHYDLKPGNILLVNGTACGEIKITDFGLS 620 (775)
T ss_pred eeecCCCchhHHHHhhh-----hhhHHHHHHHHHHHHHHHHHHhccC-CCeeeeccCCccEEEecCcccceeEeeecchh
Confidence 99999999999998764 5899999999999999999999875 89999999999999954 478999999999
Q ss_pred cccCCCC-----------CCCCCccccCccccCC----CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHH
Q 006884 486 HLINFPT-----------TATRTIGYRAPEVTET----RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVR 550 (627)
Q Consensus 486 ~~~~~~~-----------~~~~t~~y~aPE~~~~----~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~ 550 (627)
+.++... ...||.+|++||.+-- .+.+.|+||||.||++|.++.|+.||...... .
T Consensus 621 KIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ---------Q 691 (775)
T KOG1151|consen 621 KIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ---------Q 691 (775)
T ss_pred hhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH---------H
Confidence 9875432 2347899999998743 35689999999999999999999999764221 1
Q ss_pred HHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 551 SVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 551 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.++.+......-...+...+....+. ..+|++|++..-++|....++..
T Consensus 692 dILqeNTIlkAtEVqFP~KPvVsseA---kaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 692 DILQENTILKATEVQFPPKPVVSSEA---KAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred HHHhhhchhcceeccCCCCCccCHHH---HHHHHHHHHhhhhhhhhHHHHcc
Confidence 12222222111111222222233333 45667999999999998888765
No 364
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1e-31 Score=269.46 Aligned_cols=239 Identities=21% Similarity=0.298 Sum_probs=186.5
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc------cCHHHHHHHHHHHHHhccCCceeceeeEEeeC--CceeEEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA------ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSK--DEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~------~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~--~~~~lv~ 409 (627)
.+.||+|+||.||+|... ++..||+|.+.... ...+.+.+|+++++++ +|+||+++++++.+. ...++++
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~~~~v~ 85 (264)
T cd06653 7 GKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL-RHDRIVQYYGCLRDPEEKKLSIFV 85 (264)
T ss_pred eeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHc-CCCCcceEEEEEEcCCCCEEEEEE
Confidence 467999999999999965 58899999874321 1235688899999999 999999999998764 3578899
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||+++++|.+++... ..+++....+++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++...
T Consensus 86 e~~~~~~L~~~~~~~-----~~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 157 (264)
T cd06653 86 EYMPGGSIKDQLKAY-----GALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRIQ 157 (264)
T ss_pred EeCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECccccccccc
Confidence 999999999998753 24788999999999999999999998 9999999999999999999999999997653
Q ss_pred CC-------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006884 490 FP-------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 490 ~~-------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
.. ....++..|+|||++.+..++.++||||||+++|||++|+.||..... ...+........ ...+
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~-~~~~ 230 (264)
T cd06653 158 TICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA------MAAIFKIATQPT-KPML 230 (264)
T ss_pred cccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH------HHHHHHHHcCCC-CCCC
Confidence 21 123467889999999888899999999999999999999999974321 111111111110 0001
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.......+.+++.+|+. +|..||++.+++.+
T Consensus 231 ---------p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 231 ---------PDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred ---------CcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 11122456677789998 57999999988753
No 365
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.5e-31 Score=276.78 Aligned_cols=260 Identities=20% Similarity=0.325 Sum_probs=191.2
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEee-CCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYS-KDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~-~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||++... ++..||+|++.... ...+.+..|++++..+ +|||++++.+++.. ....++++||+
T Consensus 15 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~lv~e~~- 92 (328)
T cd07856 15 LQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHL-RHENIISLSDIFISPLEDIYFVTELL- 92 (328)
T ss_pred EEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhc-CCCCeeeEeeeEecCCCcEEEEeehh-
Confidence 468999999999999855 78999999886432 2346788899999999 99999999998875 45788999998
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC-C
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-T 492 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-~ 492 (627)
+++|..+++.. .+++.....++.|++.||.|||+.+ |+||||+|+||+++.++.++|+|||.+...... .
T Consensus 93 ~~~L~~~~~~~------~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~ 163 (328)
T cd07856 93 GTDLHRLLTSR------PLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLARIQDPQMT 163 (328)
T ss_pred ccCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCccccccccCCCcC
Confidence 56898887632 4788888899999999999999998 999999999999999999999999998765433 2
Q ss_pred CCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCC---------HHHHHHHHhhhccccccc
Q 006884 493 TATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVD---------LPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 562 (627)
...++..|+|||++.+ ..++.++||||||+++|||++|+.||.......... ..++......... .+.+
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 242 (328)
T cd07856 164 GYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENT-LRFV 242 (328)
T ss_pred CCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhh-HHHH
Confidence 3346778999998765 568999999999999999999999997543210000 0011110000000 0000
Q ss_pred -chhhhcCCChH----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhccc
Q 006884 563 -DVELLKYQDVE----EEMVQMLQIALSCVAKVPDSRPKMDDVVRM--IEQIQQP 610 (627)
Q Consensus 563 -d~~l~~~~~~~----~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~--L~~~~~~ 610 (627)
........... .....+.+++.+|++.+|++||++++++.+ ++..+.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~ 297 (328)
T cd07856 243 QSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDP 297 (328)
T ss_pred hhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCC
Confidence 00000000001 122467788899999999999999999875 5444443
No 366
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.98 E-value=8e-32 Score=279.70 Aligned_cols=254 Identities=20% Similarity=0.242 Sum_probs=184.6
Q ss_pred hcccCcCCceEEEEEEEc-C--CcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeC----CceeEE
Q 006884 339 AEVLGKGSYGSTYKAILE-D--GTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSK----DEKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~--~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~----~~~~lv 408 (627)
.+.||+|+||.||+++.. . +..||+|++.... ...+.+.+|++++.++.+||||+++++.+... ...+++
T Consensus 5 ~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~ 84 (332)
T cd07857 5 IKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLY 84 (332)
T ss_pred EEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEE
Confidence 467999999999999965 3 6789999986432 22456788999999997799999999875432 346788
Q ss_pred EecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 409 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
+||+. ++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||+++..
T Consensus 85 ~e~~~-~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~a~~~ 155 (332)
T cd07857 85 EELME-ADLHQIIRSG-----QPLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLARGF 155 (332)
T ss_pred Eeccc-CCHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCCceec
Confidence 88885 6898888643 35899999999999999999999998 999999999999999999999999999765
Q ss_pred CCC--------CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCC---------CHHHHHH
Q 006884 489 NFP--------TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV---------DLPRWVR 550 (627)
Q Consensus 489 ~~~--------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~---------~~~~~~~ 550 (627)
... ....++..|+|||+..+ ..++.++||||||+++|+|++|+.||......+.. .......
T Consensus 156 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (332)
T cd07857 156 SENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLS 235 (332)
T ss_pred ccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 321 12346788999998765 56899999999999999999999999754311000 0000000
Q ss_pred HHhhhcccccccch-hhhcCCCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 551 SVVREEWTAEVFDV-ELLKYQDV----EEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 551 ~~~~~~~~~~~~d~-~l~~~~~~----~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.+..... ...... ........ +.....+.+++.+|++.+|++|||+.|+++
T Consensus 236 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 236 RIGSPKA-QNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred hhhhhhH-HHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000000 000000 00000000 011346778899999999999999999986
No 367
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.98 E-value=2.2e-32 Score=276.57 Aligned_cols=238 Identities=21% Similarity=0.365 Sum_probs=191.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||++... +++.||+|++.... ...+.+..|++++.++.+|+||+++++.+..++..++||||++
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~ 85 (280)
T cd05581 6 GKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAP 85 (280)
T ss_pred eeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCC
Confidence 367999999999999965 68999999986532 2345688899999999449999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT- 492 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~- 492 (627)
+++|.+++.+. ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++++|||++.......
T Consensus 86 ~~~L~~~l~~~-----~~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~ 157 (280)
T cd05581 86 NGELLQYIRKY-----GSLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSS 157 (280)
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCccccccCCccc
Confidence 99999999764 25999999999999999999999998 9999999999999999999999999987653321
Q ss_pred -----------------------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHH
Q 006884 493 -----------------------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWV 549 (627)
Q Consensus 493 -----------------------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~ 549 (627)
...++..|+|||+..+..++.++||||||++++++++|+.||...... ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~ 231 (280)
T cd05581 158 PESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY------LTF 231 (280)
T ss_pred cccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHH------HHH
Confidence 123567899999998888999999999999999999999999854311 001
Q ss_pred HHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCH----HHHHH
Q 006884 550 RSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKM----DDVVR 602 (627)
Q Consensus 550 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~----~ev~~ 602 (627)
.......+ .........+.+++.+||+.+|++||++ +++++
T Consensus 232 ~~~~~~~~------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 232 QKILKLEY------------SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HHHHhcCC------------CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 11111000 0001113456788889999999999999 77764
No 368
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.98 E-value=1.1e-32 Score=268.49 Aligned_cols=258 Identities=22% Similarity=0.323 Sum_probs=198.1
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCC-----ceeceeeEEeeCCceeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHS-----NVVPVRAYYYSKDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~-----niv~~~~~~~~~~~~~lv~e~~ 412 (627)
...+|+|.||.|....++ .+..||+|+++....-.+..+.|+++++++.++. -++.+.++|.-.++.++|+|.+
T Consensus 94 ~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfell 173 (415)
T KOG0671|consen 94 VDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELL 173 (415)
T ss_pred hhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEecc
Confidence 467999999999999865 4789999999876665667788999999995433 3678888899999999999988
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC-------------------
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ------------------- 473 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~------------------- 473 (627)
|-++.+++..+. -.+++...+..|+.|++++++|||+.+ ++|.||||+|||+..
T Consensus 174 -G~S~~dFlk~N~---y~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ 246 (415)
T KOG0671|consen 174 -GLSTFDFLKENN---YIPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPL 246 (415)
T ss_pred -ChhHHHHhccCC---ccccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEeccceEEEeccCCccceeccC
Confidence 779999998764 357889999999999999999999988 999999999999942
Q ss_pred -CCCeEEeecccccccCCCC-CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCC-------
Q 006884 474 -DLNGCISDVGLAHLINFPT-TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVD------- 544 (627)
Q Consensus 474 -~~~~ki~DfG~a~~~~~~~-~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~------- 544 (627)
+..++|+|||.|++..... +.+.|.-|.|||++.+-.++.++||||+||||.|+.||..-|+..+..+-..
T Consensus 247 ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlG 326 (415)
T KOG0671|consen 247 KSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILG 326 (415)
T ss_pred CCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhC
Confidence 3567899999999876544 4456888999999999999999999999999999999999998654322111
Q ss_pred -HHHHHH------HHhhh---cccccccch----------hh-hcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 545 -LPRWVR------SVVRE---EWTAEVFDV----------EL-LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 545 -~~~~~~------~~~~~---~~~~~~~d~----------~l-~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
++...- ..... .|.....+. .+ ..-....++...+++|+.+|+..||.+|+|+.|++.+
T Consensus 327 p~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 327 PIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSH 406 (415)
T ss_pred CCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcC
Confidence 111000 00000 000000000 00 0011234667789999999999999999999999863
No 369
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.98 E-value=1.5e-31 Score=270.79 Aligned_cols=252 Identities=23% Similarity=0.334 Sum_probs=192.3
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
+.||+|++|.||+|... +++.||+|.+.... ...+.+..|+++++.+ +|+|++++.+++...+..++|+||++ +
T Consensus 5 ~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~~v~e~~~-~ 82 (282)
T cd07829 5 EKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKEL-KHPNIVKLLDVIHTERKLYLVFEYCD-M 82 (282)
T ss_pred hcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhc-CCCCHHHHHhhhhcCCceEEEecCcC-c
Confidence 57999999999999966 58999999987642 2346778899999999 89999999999999999999999997 5
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC---
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT--- 492 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~--- 492 (627)
+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||+|+||++++++.++|+|||.++......
T Consensus 83 ~l~~~i~~~~----~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~ 155 (282)
T cd07829 83 DLKKYLDKRP----GPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTY 155 (282)
T ss_pred CHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCcccccCCCcccc
Confidence 8999998642 35899999999999999999999998 9999999999999999999999999987764332
Q ss_pred -CCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccc------cc--cc
Q 006884 493 -TATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWT------AE--VF 562 (627)
Q Consensus 493 -~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~------~~--~~ 562 (627)
....+..|+|||.+.+. .++.++||||||+++||+++|+.||......+ ....+......... .. ..
T Consensus 156 ~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (282)
T cd07829 156 THEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEID---QLFKIFQILGTPTEESWPGVTKLPDY 232 (282)
T ss_pred CccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHH---HHHHHHHHhCCCcHHHHHhhcccccc
Confidence 22346779999998766 78999999999999999999999997543111 00001000000000 00 00
Q ss_pred chhhhcCC------ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 563 DVELLKYQ------DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 563 d~~l~~~~------~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
+....... ..+.....+.+++.+||..+|++||++++++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 233 KPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred cccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 00000000 001113467889999999999999999999763
No 370
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.98 E-value=5e-32 Score=278.46 Aligned_cols=249 Identities=22% Similarity=0.284 Sum_probs=183.1
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCC--------cee
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD--------EKL 406 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~--------~~~ 406 (627)
.+.||+|+||.||+|..+ +++.+|+|++..... ....+.+|++++..+ +|+||+++++++.... ..+
T Consensus 13 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~~~~~ 91 (311)
T cd07866 13 LGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKL-KHPNVVPLIDMAVERPDKSKRKRGSVY 91 (311)
T ss_pred EEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhc-CCCCccchhhheecccccccccCceEE
Confidence 467999999999999965 688999998864322 234577899999999 9999999998875443 358
Q ss_pred EEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccc
Q 006884 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH 486 (627)
Q Consensus 407 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 486 (627)
+|+||+.+ ++...+... ...+++..+..++.|+++||.|||+.+ |+|+||||+||++++++.++|+|||+++
T Consensus 92 lv~~~~~~-~l~~~~~~~----~~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~ 163 (311)
T cd07866 92 MVTPYMDH-DLSGLLENP----SVKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADFGLAR 163 (311)
T ss_pred EEEecCCc-CHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcCccch
Confidence 99999865 677766543 235899999999999999999999998 9999999999999999999999999987
Q ss_pred ccCCCC---------------CCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHH
Q 006884 487 LINFPT---------------TATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVR 550 (627)
Q Consensus 487 ~~~~~~---------------~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~ 550 (627)
...... ...+++.|+|||++.+ ..++.++||||||+++|||++|+.||....... ...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~------~~~ 237 (311)
T cd07866 164 PYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDID------QLH 237 (311)
T ss_pred hccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHH------HHH
Confidence 653211 1124677999998765 457899999999999999999999997543211 111
Q ss_pred HHhhhc---c---------cccccc-hhhhc-CCCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 551 SVVREE---W---------TAEVFD-VELLK-YQDV----EEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 551 ~~~~~~---~---------~~~~~d-~~l~~-~~~~----~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.+.... . .....+ ..... .... ......+.+++.+|+..+|++|||+.|++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 238 LIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 110000 0 000000 00000 0000 111246778999999999999999999875
No 371
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=7.9e-33 Score=262.77 Aligned_cols=193 Identities=25% Similarity=0.391 Sum_probs=169.1
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc-CHHH---HHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA-TKRE---FEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~---~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.++||+|.||.|-+++-+ .++.+|+|++++... .+.+ -..|-++++.- +||.+..+-..|+..+..++||||..
T Consensus 173 LKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~-~HPFLt~LKYsFQt~drlCFVMeyan 251 (516)
T KOG0690|consen 173 LKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNC-RHPFLTSLKYSFQTQDRLCFVMEYAN 251 (516)
T ss_pred HHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhc-cCcHHHHhhhhhccCceEEEEEEEcc
Confidence 478999999999999955 789999999987643 3333 34466777777 99999999989999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc----C
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI----N 489 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~----~ 489 (627)
||.|.-+|.+. +.+++......-..|+.||.|||+.+ ||.||||.+|.|+|++|++||+|||+++.. .
T Consensus 252 GGeLf~HLsre-----r~FsE~RtRFYGaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~ 323 (516)
T KOG0690|consen 252 GGELFFHLSRE-----RVFSEDRTRFYGAEIVSALGYLHSRN---IVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGD 323 (516)
T ss_pred CceEeeehhhh-----hcccchhhhhhhHHHHHHhhhhhhCC---eeeeechhhhheeccCCceEeeecccchhcccccc
Confidence 99999998764 35888888889999999999999988 999999999999999999999999998753 2
Q ss_pred CCCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCC
Q 006884 490 FPTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHD 540 (627)
Q Consensus 490 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~ 540 (627)
...+.+|||.|+|||++....|...+|+|.+||++|||+.|+.||...+.+
T Consensus 324 t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~ 374 (516)
T KOG0690|consen 324 TTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE 374 (516)
T ss_pred eeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh
Confidence 346788999999999999999999999999999999999999999876543
No 372
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.98 E-value=1.9e-31 Score=266.80 Aligned_cols=242 Identities=24% Similarity=0.321 Sum_probs=188.1
Q ss_pred hcccCcCCceEEEEEEEcC-CcEEEEEEecccc------cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILED-GTTVVVKRLREVA------ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~------~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||.||++.... +..+++|.++... ....++..|+.++..+ +|||++++++++.+....++|+||
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~ 83 (260)
T cd08222 5 QQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKL-DHPAIVKFHASFLERDAFCIITEY 83 (260)
T ss_pred eeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhC-CCCcHHHHHHHHhcCCceEEEEEe
Confidence 4679999999999998653 4456666655321 1234566788889999 999999999999999999999999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 491 (627)
+++++|.+++..... ....+++..+..++.|++.|+.|||+.+ ++|+||||+||+++. +.++|+|||.++.....
T Consensus 84 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~ 158 (260)
T cd08222 84 CEGRDLDCKLEELKH-TGKTLSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGS 158 (260)
T ss_pred CCCCCHHHHHHHHhh-cccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEeec-CCEeecccCceeecCCC
Confidence 999999999875322 2356899999999999999999999998 999999999999975 56999999998765332
Q ss_pred ----CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006884 492 ----TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 492 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
....++..|+|||...+..++.++|+||||+++|+|++|..||.... ........... ....
T Consensus 159 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~------~~~~~~~~~~~-~~~~------- 224 (260)
T cd08222 159 CDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN------FLSVVLRIVEG-PTPS------- 224 (260)
T ss_pred cccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc------HHHHHHHHHcC-CCCC-------
Confidence 23346788999999988888999999999999999999999986421 11111111111 0000
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.......++.+++.+||+.+|++||++.|++++
T Consensus 225 ---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 225 ---LPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred ---CcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 012233467788999999999999999999763
No 373
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.98 E-value=8.6e-32 Score=280.80 Aligned_cols=248 Identities=22% Similarity=0.311 Sum_probs=184.6
Q ss_pred hcccCcCCceEEEEEEE-cCCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeC------CceeEE
Q 006884 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSK------DEKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~------~~~~lv 408 (627)
.+.||+|+||.||++.. ++++.||+|++..... ..+.+.+|++++.++ +|+||+++.+++... ...+++
T Consensus 22 ~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~lv 100 (345)
T cd07877 22 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLV 100 (345)
T ss_pred EEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHc-CCCcccceeeeeeecccccccccEEEE
Confidence 36799999999999985 4688999999865422 245677899999999 999999999988643 235677
Q ss_pred EecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 409 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
++++ +++|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||+++..
T Consensus 101 ~~~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~dfg~~~~~ 170 (345)
T cd07877 101 THLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHT 170 (345)
T ss_pred ehhc-ccCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEcCCCCEEEecccccccc
Confidence 7776 7899888763 24899999999999999999999998 999999999999999999999999998866
Q ss_pred CCCC-CCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhh-c-----cccc
Q 006884 489 NFPT-TATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVRE-E-----WTAE 560 (627)
Q Consensus 489 ~~~~-~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~-~-----~~~~ 560 (627)
.... ...++..|+|||++.+ ..++.++||||||+++|||++|+.||....... ....+... . ....
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~------~~~~~~~~~~~~~~~~~~~ 244 (345)
T cd07877 171 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID------QLKLILRLVGTPGAELLKK 244 (345)
T ss_pred cccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHHHhCCCCHHHHhh
Confidence 4432 3456788999999866 567899999999999999999999996532211 01100000 0 0000
Q ss_pred ccc-------hhhhcCC--ChH----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 561 VFD-------VELLKYQ--DVE----EEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 561 ~~d-------~~l~~~~--~~~----~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
..+ ..+.... ... .....+.+++.+|++.+|.+||++.+++.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 245 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred cccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 000 0000000 000 112356788899999999999999999874
No 374
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=1.6e-31 Score=263.50 Aligned_cols=219 Identities=17% Similarity=0.205 Sum_probs=173.1
Q ss_pred CCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHHHHhhh
Q 006884 345 GSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHR 423 (627)
Q Consensus 345 G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 423 (627)
|.+|.||+++.+ +++.||+|++.... .+..|...+... .|||++++++++...+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~----~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS----EYSRERLTIIPH-CVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh----hhhhHHHHHHhc-CCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 899999999965 68899999986542 233444444444 799999999999999999999999999999999875
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC-CCCCCCccccC
Q 006884 424 NRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-TTATRTIGYRA 502 (627)
Q Consensus 424 ~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-~~~~~t~~y~a 502 (627)
. ..+++.....++.|++.||.|||+.+ ++||||||+||+++.++.++++|||.+...... ....++..|+|
T Consensus 79 ~-----~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~a 150 (237)
T cd05576 79 F-----LNIPEECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCA 150 (237)
T ss_pred h-----cCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccC
Confidence 4 24899999999999999999999988 999999999999999999999999987665432 23345677999
Q ss_pred ccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHH
Q 006884 503 PEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQI 582 (627)
Q Consensus 503 PE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l 582 (627)
||...+..++.++||||+|+++|||++|+.|+....... ... .. + ... ......+.++
T Consensus 151 PE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~------------~~~--~~-~--~~~-----~~~~~~~~~l 208 (237)
T cd05576 151 PEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI------------NTH--TT-L--NIP-----EWVSEEARSL 208 (237)
T ss_pred CcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc------------ccc--cc-c--CCc-----ccCCHHHHHH
Confidence 999988889999999999999999999998875321100 000 00 0 000 1112356678
Q ss_pred HHHcccCCCCCCCCHH
Q 006884 583 ALSCVAKVPDSRPKMD 598 (627)
Q Consensus 583 ~~~Cl~~~P~~RPs~~ 598 (627)
+.+|++.||++||++.
T Consensus 209 i~~~l~~dp~~R~~~~ 224 (237)
T cd05576 209 LQQLLQFNPTERLGAG 224 (237)
T ss_pred HHHHccCCHHHhcCCC
Confidence 8899999999999973
No 375
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=1.1e-31 Score=279.72 Aligned_cols=247 Identities=22% Similarity=0.328 Sum_probs=187.6
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCc------eeEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDE------KLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~------~~lv 408 (627)
.+.||+|+||.||+|+.. +++.||+|++.... ...+.+.+|+.+++.+ +|+|++++.+++...+. .++|
T Consensus 20 ~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~lv 98 (343)
T cd07851 20 LSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHM-DHENVIGLLDVFTPASSLEDFQDVYLV 98 (343)
T ss_pred EEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhc-cCCCHHHHHHHhhccccccccccEEEE
Confidence 367999999999999975 57899999886432 2235577899999999 99999999988766554 8899
Q ss_pred EecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 409 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
+||+ +++|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++...
T Consensus 99 ~e~~-~~~L~~~~~~------~~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~kL~dfg~~~~~ 168 (343)
T cd07851 99 THLM-GADLNNIVKC------QKLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKILDFGLARHT 168 (343)
T ss_pred EecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEccccccccc
Confidence 9998 6799998864 25899999999999999999999998 999999999999999999999999999876
Q ss_pred CCC-CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhc-cc-----cc
Q 006884 489 NFP-TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREE-WT-----AE 560 (627)
Q Consensus 489 ~~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~-~~-----~~ 560 (627)
... ....++..|+|||.+.+ ..++.++||||||+++||+++|+.||...... ..+..+.... .. ..
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~------~~~~~i~~~~~~~~~~~~~~ 242 (343)
T cd07851 169 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI------DQLKRIMNLVGTPDEELLQK 242 (343)
T ss_pred cccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHHHhcCCCCHHHHhh
Confidence 433 23456788999999865 46789999999999999999999999754321 1111111000 00 00
Q ss_pred c--------cc-hhhhcCCChH----HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 561 V--------FD-VELLKYQDVE----EEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 561 ~--------~d-~~l~~~~~~~----~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
+ +. .......... .....+.+++.+|+..+|++|||+.||++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 243 ISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred ccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 0 00 0000000011 12356778999999999999999999987
No 376
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.97 E-value=1.3e-31 Score=279.06 Aligned_cols=251 Identities=21% Similarity=0.275 Sum_probs=182.1
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeC--------------
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSK-------------- 402 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~-------------- 402 (627)
.+.||+|+||.||+|... +++.||+|++.... ...+.+.+|+++++.+ +||||+++++.+...
T Consensus 10 ~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~~~~~~~ 88 (342)
T cd07854 10 LRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRL-DHDNIVKVYEVLGPSGSDLTEDVGSLTEL 88 (342)
T ss_pred EEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhc-CCCcchhhHhhhccccccccccccccccc
Confidence 467999999999999965 58899999886543 3346788899999999 999999998776543
Q ss_pred CceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC-CCCeEEee
Q 006884 403 DEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ-DLNGCISD 481 (627)
Q Consensus 403 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~-~~~~ki~D 481 (627)
...++|+||++ ++|.+++... .+++..+..++.|++.||.|||+.+ |+||||||+||+++. ++.+|++|
T Consensus 89 ~~~~lv~e~~~-~~L~~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~~~~~~kl~d 158 (342)
T cd07854 89 NSVYIVQEYME-TDLANVLEQG------PLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINTEDLVLKIGD 158 (342)
T ss_pred ceEEEEeeccc-ccHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCceEEECC
Confidence 34689999997 5888887532 4889999999999999999999998 999999999999974 56789999
Q ss_pred cccccccCCC-------CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHh
Q 006884 482 VGLAHLINFP-------TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVV 553 (627)
Q Consensus 482 fG~a~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 553 (627)
||.++..... ....++..|+|||++.. ..++.++|||||||++|||++|+.||......+. .........
T Consensus 159 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~--~~~~~~~~~ 236 (342)
T cd07854 159 FGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQ--MQLILESVP 236 (342)
T ss_pred cccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcC
Confidence 9998765322 11235778999998654 5678899999999999999999999975432110 000000000
Q ss_pred ----------hhcccccccchhhhcCCC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 554 ----------REEWTAEVFDVELLKYQD----VEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 554 ----------~~~~~~~~~d~~l~~~~~----~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.................. .+....++.+++.+|++.+|++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 237 VVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred CCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 000000000000000000 0112245678899999999999999999985
No 377
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=9.6e-32 Score=280.22 Aligned_cols=259 Identities=22% Similarity=0.362 Sum_probs=190.2
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCC------ceeEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD------EKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~------~~~lv 408 (627)
.+.||+|+||.||++... ++..||||++..... ..+.+.+|++++..+ +|+||+++++++..+. ..++|
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~lv 98 (343)
T cd07880 20 LKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-KHENVIGLLDVFTPDLSLDRFHDFYLV 98 (343)
T ss_pred EEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhc-CCCCccceeeeecCCccccccceEEEE
Confidence 367999999999999854 689999999864322 235678899999999 9999999999887553 35899
Q ss_pred EecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 409 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
+||+ +++|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++...
T Consensus 99 ~e~~-~~~l~~~~~~------~~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~kl~dfg~~~~~ 168 (343)
T cd07880 99 MPFM-GTDLGKLMKH------EKLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQT 168 (343)
T ss_pred EecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeccccccc
Confidence 9998 7799888753 25899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCC-CCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCC---------CHHHHHHHHhhhcc
Q 006884 489 NFPT-TATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV---------DLPRWVRSVVREEW 557 (627)
Q Consensus 489 ~~~~-~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~---------~~~~~~~~~~~~~~ 557 (627)
.... ...+++.|+|||.+.+ ..++.++||||||+++|++++|+.||......... ....+...+....
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 247 (343)
T cd07880 169 DSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSED- 247 (343)
T ss_pred ccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchh-
Confidence 4432 3356788999999875 45889999999999999999999999754211000 0000000000000
Q ss_pred cccccchhhhcCC--C----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHhhccc
Q 006884 558 TAEVFDVELLKYQ--D----VEEEMVQMLQIALSCVAKVPDSRPKMDDVVR--MIEQIQQP 610 (627)
Q Consensus 558 ~~~~~d~~l~~~~--~----~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~--~L~~~~~~ 610 (627)
..... ..+.... . .+.....+.+++.+|++.+|++|||+.+++. .++.+...
T Consensus 248 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~ 307 (343)
T cd07880 248 AKNYV-KKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDP 307 (343)
T ss_pred HHHHH-HhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCc
Confidence 00000 0000000 0 0112235678999999999999999999994 55555443
No 378
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-31 Score=239.34 Aligned_cols=214 Identities=24% Similarity=0.360 Sum_probs=173.7
Q ss_pred CceeeecCCCCCCCHHHHHHHHhcccCcCCceEEEEEEEc-CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCcee
Q 006884 317 NKLCFLDGSYFNFDLEDLLRASAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVV 393 (627)
Q Consensus 317 ~~~~~~~~~~~~~~~~~l~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv 393 (627)
..+.....+.+++.-+++ ...+.||+|++|.|-+.++. +|+..|+|++..... ..++...|+.+..+-..+|.+|
T Consensus 31 ~a~i~I~~~~~eV~ad~L--~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V 108 (282)
T KOG0984|consen 31 RALIYIGDRNFEVPADDL--VGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTV 108 (282)
T ss_pred CceEEEecCccccchhhh--hhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEE
Confidence 334444444444444444 44578999999999888854 799999999976543 3456677777766666899999
Q ss_pred ceeeEEeeCCceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC
Q 006884 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ 473 (627)
Q Consensus 394 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~ 473 (627)
.++|.+......++.||.|.. +|..+.++.- ..+..+++...-+||..|..||.|||++- .++|||+||+|||++.
T Consensus 109 ~FyGa~~regdvwIcME~M~t-Sldkfy~~v~-~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~ 184 (282)
T KOG0984|consen 109 HFYGALFREGDVWICMELMDT-SLDKFYRKVL-KKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINY 184 (282)
T ss_pred EeehhhhccccEEEeHHHhhh-hHHHHHHHHH-hcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEcc
Confidence 999999999999999999965 7877766542 23567899999999999999999999974 6999999999999999
Q ss_pred CCCeEEeecccccccCCCCC---CCCCccccCccccCC----CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 006884 474 DLNGCISDVGLAHLINFPTT---ATRTIGYRAPEVTET----RKASQKSDVYSFGVLLLEMLTGKAPLQH 536 (627)
Q Consensus 474 ~~~~ki~DfG~a~~~~~~~~---~~~t~~y~aPE~~~~----~~~~~~~Dv~S~Gvvl~el~tg~~pf~~ 536 (627)
+|.+||||||++..+.++.. ..|...|||||.+.. ..|+-|+||||+|+++.||.+++.||+.
T Consensus 185 ~GqVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 185 DGQVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES 254 (282)
T ss_pred CCcEEEcccccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence 99999999999988765432 446677999999853 4789999999999999999999999974
No 379
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=4.8e-31 Score=296.29 Aligned_cols=139 Identities=19% Similarity=0.330 Sum_probs=124.0
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|... +++.||||+++.... ....+..|+.++..+ +|+||+++++.+...+..++||||++
T Consensus 9 ~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~lVmEy~~ 87 (669)
T cd05610 9 VKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALS-KSPFIVHLYYSLQSANNVYLVMEYLI 87 (669)
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhc-CCCCcCeEEEEEEECCEEEEEEeCCC
Confidence 467999999999999976 688999999875422 235678888999888 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccc
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH 486 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 486 (627)
+++|.+++... ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 88 g~~L~~li~~~-----~~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 88 GGDVKSLLHIY-----GYFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999754 24788999999999999999999998 9999999999999999999999999875
No 380
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4e-32 Score=295.03 Aligned_cols=240 Identities=22% Similarity=0.333 Sum_probs=189.2
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccc----ccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV----AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.++||+|+||.|..++.+ .++.||+|++.+. ......|..|-.+|..- ..+=|+.+...|.+..++|+|||||+
T Consensus 80 lKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~-ns~Wiv~LhyAFQD~~~LYlVMdY~p 158 (1317)
T KOG0612|consen 80 LKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFG-NSEWIVQLHYAFQDERYLYLVMDYMP 158 (1317)
T ss_pred HHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcC-CcHHHHHHHHHhcCccceEEEEeccc
Confidence 588999999999999976 5788999999874 23456788888888766 77889999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC---
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF--- 490 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~--- 490 (627)
||+|-.++.+. ..+++.++..++..|+.||.-||+.| +|||||||+|||+|..|++|++|||.+-.+..
T Consensus 159 GGDlltLlSk~-----~~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~ 230 (1317)
T KOG0612|consen 159 GGDLLTLLSKF-----DRLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGT 230 (1317)
T ss_pred CchHHHHHhhc-----CCChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeeccchhHHhcCCCCc
Confidence 99999999865 26899999999999999999999999 99999999999999999999999999876653
Q ss_pred --CCCCCCCccccCccccC----C-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006884 491 --PTTATRTIGYRAPEVTE----T-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 491 --~~~~~~t~~y~aPE~~~----~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
..+.+|||.|++||++. + +.|.+.+|+||+||++|||+.|.-||.... +.+-...+..-. +.+.
T Consensus 231 V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads------lveTY~KIm~hk---~~l~ 301 (1317)
T KOG0612|consen 231 VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS------LVETYGKIMNHK---ESLS 301 (1317)
T ss_pred EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHH------HHHHHHHHhchh---hhcC
Confidence 34567999999999984 3 578999999999999999999999997532 222222222111 0111
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcccCCCCCCCC---HHHHHH
Q 006884 564 VELLKYQDVEEEMVQMLQIALSCVAKVPDSRPK---MDDVVR 602 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs---~~ev~~ 602 (627)
++....++++.+.++. +-+ -+|+.|-. ++|+..
T Consensus 302 --FP~~~~VSeeakdLI~---~ll-~~~e~RLgrngiedik~ 337 (1317)
T KOG0612|consen 302 --FPDETDVSEEAKDLIE---ALL-CDREVRLGRNGIEDIKN 337 (1317)
T ss_pred --CCcccccCHHHHHHHH---HHh-cChhhhcccccHHHHHh
Confidence 1111234555655554 322 56777776 888766
No 381
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2e-31 Score=276.33 Aligned_cols=237 Identities=19% Similarity=0.285 Sum_probs=189.2
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
...+|.|+|+.|-.+... +++..++|++.+. ..+-.+|+.++.....||||+++.+.+.+..+.++|||.+.++-+
T Consensus 327 ~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~---~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~el 403 (612)
T KOG0603|consen 327 REELGEGSFSAVKYCESSPTDQEPAVKIISKR---ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGEL 403 (612)
T ss_pred ccccCCCCccceeeeeccccccchhheecccc---ccccccccchhhhhcCCCcceeecceecCCceeeeeehhccccHH
Confidence 345999999999888854 6888999998654 333456677778888999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe-cCCCCeEEeecccccccCCC-CCCC
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL-TQDLNGCISDVGLAHLINFP-TTAT 495 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl-~~~~~~ki~DfG~a~~~~~~-~~~~ 495 (627)
.+.+...+. .. ..+..|+.+++.|+.|||++| +|||||||+|||+ +..++++|+|||.++..... .+..
T Consensus 404 l~ri~~~~~-----~~-~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~ 474 (612)
T KOG0603|consen 404 LRRIRSKPE-----FC-SEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPA 474 (612)
T ss_pred HHHHHhcch-----hH-HHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechhhhCchhhcccc
Confidence 888775432 23 677889999999999999998 9999999999999 58999999999999988655 3446
Q ss_pred CCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHH
Q 006884 496 RTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEE 575 (627)
Q Consensus 496 ~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 575 (627)
.|..|.|||+.....|++.+||||||++||+|++|+.||.....+ .+ +...+...... ....+
T Consensus 475 ~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~--~e----i~~~i~~~~~s----------~~vS~- 537 (612)
T KOG0603|consen 475 LTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG--IE----IHTRIQMPKFS----------ECVSD- 537 (612)
T ss_pred hhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch--HH----HHHhhcCCccc----------cccCH-
Confidence 788999999999999999999999999999999999999864332 11 11111111000 11223
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 006884 576 MVQMLQIALSCVAKVPDSRPKMDDVVRMIEQ 606 (627)
Q Consensus 576 ~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~ 606 (627)
...+++..||+.||.+||+|.++..+=..
T Consensus 538 --~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 538 --EAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred --HHHHHHHHhccCChhhCcChhhhccCcch
Confidence 34456779999999999999999875444
No 382
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5.8e-32 Score=264.15 Aligned_cols=194 Identities=26% Similarity=0.357 Sum_probs=167.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
..+||+|+||.|-++.-+ ....+|||++++... +-+--+.|-+++..-++-|.++++..+|+.-+.+|+||||+.
T Consensus 354 l~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvn 433 (683)
T KOG0696|consen 354 LMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVN 433 (683)
T ss_pred EEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEec
Confidence 478999999999999866 456799999987632 223345566677777788999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC----
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN---- 489 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~---- 489 (627)
||+|--++++. ..+.+..+...|..||.||-+||++| |+.||||.+|||+|.+|++||+|||+++.--
T Consensus 434 GGDLMyhiQQ~-----GkFKEp~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~ 505 (683)
T KOG0696|consen 434 GGDLMYHIQQV-----GKFKEPVAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGV 505 (683)
T ss_pred CchhhhHHHHh-----cccCCchhhhhhHHHHHHhhhhhcCC---eeeeeccccceEeccCCceEeeecccccccccCCc
Confidence 99998888765 34778889999999999999999999 9999999999999999999999999987532
Q ss_pred CCCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCC
Q 006884 490 FPTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHD 540 (627)
Q Consensus 490 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~ 540 (627)
...+..||+.|+|||++...+|...+|+|||||+||||+.|++||++.+++
T Consensus 506 TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~ 556 (683)
T KOG0696|consen 506 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED 556 (683)
T ss_pred ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHH
Confidence 224567999999999999999999999999999999999999999976543
No 383
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-31 Score=232.79 Aligned_cols=253 Identities=22% Similarity=0.337 Sum_probs=189.6
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccC---HHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAAT---KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.++||+|.||+||+|+.+ .++.||+|+++....+ .....+|+-+++.+ +|.|||++++....+...-+|+||+..
T Consensus 7 mekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkel-khknivrl~dvlhsdkkltlvfe~cdq 85 (292)
T KOG0662|consen 7 MEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLTLVFEFCDQ 85 (292)
T ss_pred HHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHh-hhcceeehhhhhccCceeEEeHHHhhH
Confidence 378999999999999954 5889999998765432 35678999999999 999999999999999999999999955
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
+|..|..... ..++......++.|+++||.++|+++ +.|||+||.|.|++.+|+.|++|||+++..+.+
T Consensus 86 -dlkkyfdsln----g~~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglarafgipvrc 157 (292)
T KOG0662|consen 86 -DLKKYFDSLN----GDLDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRC 157 (292)
T ss_pred -HHHHHHHhcC----CcCCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhcCCceEe
Confidence 7888876543 35888899999999999999999998 999999999999999999999999999988654
Q ss_pred -CCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHH---hhhcccccccchh
Q 006884 492 -TTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSV---VREEWTAEVFDVE 565 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~d~~ 565 (627)
+....|.+|.+|.++.+. -|++..|+||-||++.|+.. |++-|.+.+.++ ++.+.++.. ..+.|..-.--+.
T Consensus 158 ysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvdd--qlkrif~~lg~p~ed~wps~t~lpd 235 (292)
T KOG0662|consen 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD--QLKRIFRLLGTPTEDQWPSMTKLPD 235 (292)
T ss_pred eeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHH--HHHHHHHHhCCCccccCCccccCCC
Confidence 345578999999998765 58999999999999999988 566676654332 222222211 1122221111011
Q ss_pred hhcCC------ChHHHH----HHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 566 LLKYQ------DVEEEM----VQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 566 l~~~~------~~~~~~----~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
...++ ...+.. ..=.+++.+.+.-+|.+|.++++.++
T Consensus 236 yk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 236 YKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 11110 011111 11235566777789999999998864
No 384
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-31 Score=268.03 Aligned_cols=250 Identities=20% Similarity=0.342 Sum_probs=195.4
Q ss_pred CCHHHHHHHH-hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCC
Q 006884 329 FDLEDLLRAS-AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD 403 (627)
Q Consensus 329 ~~~~~l~~~~-~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~ 403 (627)
.++..+.+.. .++||+|-||+||-|+.+ +|+.||||++.+.. ..+....+|+.+++.+ .||.||.+.-.|+..+
T Consensus 558 vd~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l-~HPGiV~le~M~ET~e 636 (888)
T KOG4236|consen 558 VDISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNL-HHPGIVNLECMFETPE 636 (888)
T ss_pred hhHHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhc-CCCCeeEEEEeecCCc
Confidence 3444444333 689999999999999965 79999999987653 3457789999999999 9999999999999999
Q ss_pred ceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC---CCeEEe
Q 006884 404 EKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD---LNGCIS 480 (627)
Q Consensus 404 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~---~~~ki~ 480 (627)
..++|||-+.|.=|...|... ..++++.....+..||+.||.|||.++ |+|+||||+|||+... -.+|||
T Consensus 637 rvFVVMEKl~GDMLEMILSsE----kgRL~er~TkFlvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~~FPQvKlC 709 (888)
T KOG4236|consen 637 RVFVVMEKLHGDMLEMILSSE----KGRLPERITKFLVTQILVALRYLHFKN---IVHCDLKPENVLLASASPFPQVKLC 709 (888)
T ss_pred eEEEEehhhcchHHHHHHHhh----cccchHHHHHHHHHHHHHHHHHhhhcc---eeeccCCchheeeccCCCCCceeec
Confidence 999999999665555555433 346888888889999999999999998 9999999999999754 468999
Q ss_pred ecccccccCCC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcc
Q 006884 481 DVGLAHLINFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEW 557 (627)
Q Consensus 481 DfG~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 557 (627)
|||+|+.+... .+.+||+.|+|||++..+.|...-|+||.||++|--++|..||.+.. + +...++..
T Consensus 710 DFGfARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdE--d-------IndQIQNA- 779 (888)
T KOG4236|consen 710 DFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDE--D-------INDQIQNA- 779 (888)
T ss_pred cccceeecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCcc--c-------hhHHhhcc-
Confidence 99999998654 45679999999999999999999999999999999999999997532 1 11112111
Q ss_pred cccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 558 TAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 558 ~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
..++.+ ..+.|.....+++|...++.+=.+|-|....+.
T Consensus 780 -aFMyPp-----~PW~eis~~AidlIn~LLqVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 780 -AFMYPP-----NPWSEISPEAIDLINNLLQVKMRKRYSVDKSLS 818 (888)
T ss_pred -ccccCC-----CchhhcCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence 111111 122344445566777777788888888776544
No 385
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=1.3e-29 Score=249.91 Aligned_cols=234 Identities=25% Similarity=0.384 Sum_probs=189.4
Q ss_pred CceEEEEEEEc-CCcEEEEEEecccccC--HHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHHHHhh
Q 006884 346 SYGSTYKAILE-DGTTVVVKRLREVAAT--KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLH 422 (627)
Q Consensus 346 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 422 (627)
+||.||+|... +++.+|+|++...... .+.+.+|++.++++ +|+|++++++++......++++||+++++|.+++.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~ 79 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKL-KHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLK 79 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhC-CCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHH
Confidence 58999999976 4899999998754332 57899999999999 99999999999999999999999999999999987
Q ss_pred hcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---CCCCCCcc
Q 006884 423 RNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---TTATRTIG 499 (627)
Q Consensus 423 ~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~---~~~~~t~~ 499 (627)
... .+++..+..++.+++.++.|||+.+ ++|+||+|+||+++.++.++|+|||.+...... ....++..
T Consensus 80 ~~~-----~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~ 151 (244)
T smart00220 80 KRG-----RLSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPE 151 (244)
T ss_pred hcc-----CCCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcC
Confidence 542 2889999999999999999999998 999999999999999999999999999877543 33456788
Q ss_pred ccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHH
Q 006884 500 YRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQM 579 (627)
Q Consensus 500 y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l 579 (627)
|++||...+..++.++||||||++++++++|..||..... ....... ........ .........++
T Consensus 152 ~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~-----~~~~~~~-~~~~~~~~--------~~~~~~~~~~~ 217 (244)
T smart00220 152 YMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQ-----LLELFKK-IGKPKPPF--------PPPEWKISPEA 217 (244)
T ss_pred CCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-----HHHHHHH-HhccCCCC--------ccccccCCHHH
Confidence 9999999888899999999999999999999999975311 1111111 11110000 00000023467
Q ss_pred HHHHHHcccCCCCCCCCHHHHHH
Q 006884 580 LQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 580 ~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.+++.+|+..+|++||++.++++
T Consensus 218 ~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 218 KDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHHccCCchhccCHHHHhh
Confidence 78899999999999999999986
No 386
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=7.8e-32 Score=247.81 Aligned_cols=258 Identities=22% Similarity=0.330 Sum_probs=188.9
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecc-c--ccCHHHHHHHHHHHHHhccCCceeceeeEEeeC--------Ccee
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLRE-V--AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSK--------DEKL 406 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~-~--~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~--------~~~~ 406 (627)
..+||+|.||.||+|+.+ .|+.||+|+.-- . ..-.....+|+.++..+ +|+|++.++..|... ...+
T Consensus 22 ~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~l-kHenv~nliEic~tk~Tp~~r~r~t~y 100 (376)
T KOG0669|consen 22 LAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEICRTKATPTNRDRATFY 100 (376)
T ss_pred HHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHh-cchhHHHHHHHHhhccCCcccccceee
Confidence 468999999999999955 577888886532 1 11234568899999999 999999998887532 3478
Q ss_pred EEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccc
Q 006884 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH 486 (627)
Q Consensus 407 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 486 (627)
+|+.+++. +|...|... ...++...+.+++.++..||.|+|... |+|||+||.|+||+.++.+||+|||+++
T Consensus 101 lVf~~ceh-DLaGlLsn~----~vr~sls~Ikk~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt~dgilklADFGlar 172 (376)
T KOG0669|consen 101 LVFDFCEH-DLAGLLSNR----KVRFSLSEIKKVMKGLMNGLYYIHRNK---ILHRDMKAANVLITKDGILKLADFGLAR 172 (376)
T ss_pred eeHHHhhh-hHHHHhcCc----cccccHHHHHHHHHHHHHHHHHHHHhh---HHhhcccHhhEEEcCCceEEeecccccc
Confidence 99999977 788888643 246888999999999999999999987 9999999999999999999999999998
Q ss_pred ccCCCC--------CCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHH-HHHHhhhc
Q 006884 487 LINFPT--------TATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRW-VRSVVREE 556 (627)
Q Consensus 487 ~~~~~~--------~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~-~~~~~~~~ 556 (627)
.+..+. ..+.|.+|.+||.+.+ +.|+++.|||.-||++.||+||.+-+++..+....++.+. ...+..+-
T Consensus 173 ~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkev 252 (376)
T KOG0669|consen 173 AFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEV 252 (376)
T ss_pred ceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCccc
Confidence 764322 2234889999999876 5789999999999999999999998887654322222111 11111111
Q ss_pred cccc-------ccc-hhhh--cCCChHHHHH------HHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 006884 557 WTAE-------VFD-VELL--KYQDVEEEMV------QMLQIALSCVAKVPDSRPKMDDVVRMIE 605 (627)
Q Consensus 557 ~~~~-------~~d-~~l~--~~~~~~~~~~------~l~~l~~~Cl~~~P~~RPs~~ev~~~L~ 605 (627)
|..- .+. +.+. .....++.++ +..+++..++..||.+|+.+.+++.+--
T Consensus 253 WP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~ 317 (376)
T KOG0669|consen 253 WPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDF 317 (376)
T ss_pred CCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhh
Confidence 1100 000 0011 1112223333 5567788899999999999999887543
No 387
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=4.8e-30 Score=281.17 Aligned_cols=252 Identities=19% Similarity=0.221 Sum_probs=160.2
Q ss_pred hcccCcCCceEEEEEEEc-C----CcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeE------EeeCCceeE
Q 006884 339 AEVLGKGSYGSTYKAILE-D----GTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAY------YYSKDEKLV 407 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~------~~~~~~~~l 407 (627)
.+.||+|+||.||+|++. + +..||+|++...... +.+..+ .+... .+.++..+... .......++
T Consensus 137 ~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~-e~~~~e--~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~L 212 (566)
T PLN03225 137 GKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV-EIWMNE--RVRRA-CPNSCADFVYGFLEPVSSKKEDEYWL 212 (566)
T ss_pred eEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh-HHHHHH--HHHhh-chhhHHHHHHhhhcccccccCCceEE
Confidence 478999999999999976 4 689999987643211 111111 11111 22222222211 234567899
Q ss_pred EEecCCCCcHHHHhhhcCCC---------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEec
Q 006884 408 VYSYMPAGSLFMLLHRNRSD---------------GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLT 472 (627)
Q Consensus 408 v~e~~~~gsL~~~l~~~~~~---------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~ 472 (627)
|+||+.+++|.+++...... .........+..++.|++.||.|||+.+ |+||||||+|||++
T Consensus 213 V~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g---IiHRDLKP~NILl~ 289 (566)
T PLN03225 213 VWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG---IVHRDVKPQNIIFS 289 (566)
T ss_pred EEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC---EEeCcCCHHHEEEe
Confidence 99999999999998753210 0001123345679999999999999998 99999999999998
Q ss_pred C-CCCeEEeecccccccCC-----CCCCCCCccccCccccCCC----------------------CCCCcchhHHHHHHH
Q 006884 473 Q-DLNGCISDVGLAHLINF-----PTTATRTIGYRAPEVTETR----------------------KASQKSDVYSFGVLL 524 (627)
Q Consensus 473 ~-~~~~ki~DfG~a~~~~~-----~~~~~~t~~y~aPE~~~~~----------------------~~~~~~Dv~S~Gvvl 524 (627)
. ++.+||+|||+|+.... .....+++.|+|||.+... .++.++|||||||++
T Consensus 290 ~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL 369 (566)
T PLN03225 290 EGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIF 369 (566)
T ss_pred CCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHH
Confidence 6 58999999999986532 2345678999999965322 234567999999999
Q ss_pred HHHHhCCCCCCCCCC-------CCCCCHHHHHHHHhhhcccccccchhhhc-CCChHHHHHHHHHHHHHcccCCCCCCCC
Q 006884 525 LEMLTGKAPLQHSGH-------DDVVDLPRWVRSVVREEWTAEVFDVELLK-YQDVEEEMVQMLQIALSCVAKVPDSRPK 596 (627)
Q Consensus 525 ~el~tg~~pf~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~d~~l~~-~~~~~~~~~~l~~l~~~Cl~~~P~~RPs 596 (627)
|||+++..+++.... ....+...|....... ..+.+.. ............+++.+|++.||++|||
T Consensus 370 ~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~t 443 (566)
T PLN03225 370 LQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPR------ASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRIS 443 (566)
T ss_pred HHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccc------cchhhhhhhhhccccchHHHHHHHHHccCCcccCCC
Confidence 999997766442100 0001111111110000 0000000 0000111223457899999999999999
Q ss_pred HHHHHHH
Q 006884 597 MDDVVRM 603 (627)
Q Consensus 597 ~~ev~~~ 603 (627)
++|++++
T Consensus 444 a~e~L~H 450 (566)
T PLN03225 444 AKAALAH 450 (566)
T ss_pred HHHHhCC
Confidence 9999885
No 388
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.2e-31 Score=266.51 Aligned_cols=250 Identities=18% Similarity=0.258 Sum_probs=197.6
Q ss_pred CCCCHHHHHHHHhcccCcCCceEEEEEEEcCCc-EEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEee
Q 006884 327 FNFDLEDLLRASAEVLGKGSYGSTYKAILEDGT-TVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYS 401 (627)
Q Consensus 327 ~~~~~~~l~~~~~~~lg~G~~g~Vy~~~~~~~~-~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~ 401 (627)
....++++.. ...||-||||.|-++..++.. .+|+|.+++.. ...+.+..|-.+|... +.|.||+++..|.+
T Consensus 415 a~v~l~dl~~--iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~-~s~fIvrLYrTfrd 491 (732)
T KOG0614|consen 415 AQVKLSDLKR--IATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMEC-RSDFIVRLYRTFRD 491 (732)
T ss_pred cccchhhhhh--hhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhc-CchHHHHHHHHhcc
Confidence 3455566633 467999999999999977433 48888887542 2345677888899888 89999999999999
Q ss_pred CCceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEee
Q 006884 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISD 481 (627)
Q Consensus 402 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~D 481 (627)
....|++||-|-||.|+..++.. ..++......++..+.+|++|||+++ ||.|||||+|.+++.+|-+||.|
T Consensus 492 ~kyvYmLmEaClGGElWTiLrdR-----g~Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVD 563 (732)
T KOG0614|consen 492 SKYVYMLMEACLGGELWTILRDR-----GSFDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVD 563 (732)
T ss_pred chhhhhhHHhhcCchhhhhhhhc-----CCcccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEee
Confidence 99999999999999999999864 35888889999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCC---CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006884 482 VGLAHLINFPT---TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 482 fG~a~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
||+|+.+.... +++||+.|.|||++..+..+..+|.||+|+++|||++|.+||.+.+.-... ..++. +..
T Consensus 564 FGFAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktY------n~ILk-Gid 636 (732)
T KOG0614|consen 564 FGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTY------NLILK-GID 636 (732)
T ss_pred hhhHHHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHH------HHHHh-hhh
Confidence 99999986543 578999999999999999999999999999999999999999875422111 11111 111
Q ss_pred ccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 006884 559 AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPK-----MDDVVRM 603 (627)
Q Consensus 559 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs-----~~ev~~~ 603 (627)
.-.+. ....+...+++++.++.+|.+|-- ..||.++
T Consensus 637 ~i~~P---------r~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH 677 (732)
T KOG0614|consen 637 KIEFP---------RRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKH 677 (732)
T ss_pred hhhcc---------cccchhHHHHHHHHHhcCcHhhhccccCChHHHHhh
Confidence 00000 112234456777888899999975 6666664
No 389
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=4.2e-29 Score=266.88 Aligned_cols=250 Identities=21% Similarity=0.258 Sum_probs=169.3
Q ss_pred hcccCcCCceEEEEEEE-----------------cCCcEEEEEEeccccc-CH--------------HHHHHHHHHHHHh
Q 006884 339 AEVLGKGSYGSTYKAIL-----------------EDGTTVVVKRLREVAA-TK--------------REFEQQMEVVGTI 386 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~-~~--------------~~~~~e~~~l~~l 386 (627)
.++||+|+||.||+|.. .+++.||||++..... .. +.+..|+.++.++
T Consensus 150 ~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~l~~l 229 (507)
T PLN03224 150 RDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYMCAKI 229 (507)
T ss_pred eeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHHHHHh
Confidence 47899999999999964 2356799999864321 11 2234466667777
Q ss_pred ccCCc-----eeceeeEEee--------CCceeEEEecCCCCcHHHHhhhcCCC-------------------CCCCCCH
Q 006884 387 GKHSN-----VVPVRAYYYS--------KDEKLVVYSYMPAGSLFMLLHRNRSD-------------------GGTALDW 434 (627)
Q Consensus 387 ~~h~n-----iv~~~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~~~-------------------~~~~l~~ 434 (627)
+|.+ ++.++++|.. .+..++||||+++|+|.++++..... ....++|
T Consensus 230 -~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~ 308 (507)
T PLN03224 230 -KRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDI 308 (507)
T ss_pred -hcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCH
Confidence 4443 3667777753 35689999999999999998743210 1123578
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-----CCCCCccccCccccCCC
Q 006884 435 NSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-----TATRTIGYRAPEVTETR 509 (627)
Q Consensus 435 ~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~-----~~~~t~~y~aPE~~~~~ 509 (627)
..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++...... ...+++.|+|||.+...
T Consensus 309 ~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~ 385 (507)
T PLN03224 309 NVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMP 385 (507)
T ss_pred HHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCC
Confidence 889999999999999999998 9999999999999999999999999997653321 12247889999987532
Q ss_pred C--------------------C--CCcchhHHHHHHHHHHHhCCC-CCCCCCCCC------CCCHHHHHHHHhhhccccc
Q 006884 510 K--------------------A--SQKSDVYSFGVLLLEMLTGKA-PLQHSGHDD------VVDLPRWVRSVVREEWTAE 560 (627)
Q Consensus 510 ~--------------------~--~~~~Dv~S~Gvvl~el~tg~~-pf~~~~~~~------~~~~~~~~~~~~~~~~~~~ 560 (627)
. + ..+.||||+||++|||++|.. ||....... ...+..|.. ... .
T Consensus 386 ~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~--~~~----~ 459 (507)
T PLN03224 386 QSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRM--YKG----Q 459 (507)
T ss_pred CCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHh--hcc----c
Confidence 2 1 134799999999999999875 665321100 001111110 000 0
Q ss_pred ccchhhhcCCChHHHHHHHHHHHHHcccCCC---CCCCCHHHHHHH
Q 006884 561 VFDVELLKYQDVEEEMVQMLQIALSCVAKVP---DSRPKMDDVVRM 603 (627)
Q Consensus 561 ~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P---~~RPs~~ev~~~ 603 (627)
..+. ...........+++.+++..+| .+|+|++|++++
T Consensus 460 ~~~~-----~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 460 KYDF-----SLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred CCCc-----ccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 0110 0111122345567778888765 789999999864
No 390
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1e-28 Score=247.00 Aligned_cols=152 Identities=16% Similarity=0.302 Sum_probs=125.9
Q ss_pred cccCceeeecCCCCCCCHHHHHH-HH---hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhcc
Q 006884 314 AEKNKLCFLDGSYFNFDLEDLLR-AS---AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK 388 (627)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~l~~-~~---~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~ 388 (627)
.++..-.+..|.|..+.+.|... .. .++||.|.|++||++.+. +.+.||+|+.+....-.+....|+++++.+..
T Consensus 54 eqE~~~dY~kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~ 133 (590)
T KOG1290|consen 54 EQEDPEDYRKGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVRE 133 (590)
T ss_pred cccChhhhhcCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHh
Confidence 33444456677888888888876 32 678999999999999965 57899999998766556778899999998864
Q ss_pred CC-------ceeceeeEEee----CCceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 006884 389 HS-------NVVPVRAYYYS----KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGA 457 (627)
Q Consensus 389 h~-------niv~~~~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~ 457 (627)
+. +||+++++|.. +.+.++|+|++ |.+|..++.+... +.++...+.+|+.||+.||.|||.++
T Consensus 134 ~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~Y---rGlpl~~VK~I~~qvL~GLdYLH~ec-- 207 (590)
T KOG1290|consen 134 GDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNY---RGLPLSCVKEICRQVLTGLDYLHREC-- 207 (590)
T ss_pred cCCCCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCC---CCCcHHHHHHHHHHHHHHHHHHHHhc--
Confidence 33 69999999974 45789999998 7799999987643 45899999999999999999999998
Q ss_pred CeeecCCCCCCeEe
Q 006884 458 KFTHGNIKSSNVLL 471 (627)
Q Consensus 458 ~ivH~Dlkp~NILl 471 (627)
.|||.||||+|||+
T Consensus 208 gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 208 GIIHTDLKPENVLL 221 (590)
T ss_pred CccccCCCcceeee
Confidence 69999999999998
No 391
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.7e-29 Score=240.97 Aligned_cols=238 Identities=20% Similarity=0.308 Sum_probs=187.3
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
..+||+|+|+.|..++++ ..+.+|+|++++.-. ...-...|-.+.....+||.+|-+..+|.....+++|.||.+
T Consensus 255 l~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv~ 334 (593)
T KOG0695|consen 255 LRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVN 334 (593)
T ss_pred eeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEec
Confidence 478999999999999965 578899999876522 223345566667777799999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc----C
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI----N 489 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~----~ 489 (627)
||+|--++++++ .+++..+......|..||.|||+.| |+.||||.+|+|+|.+|++|+.|+|+.+.- +
T Consensus 335 ggdlmfhmqrqr-----klpeeharfys~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygmcke~l~~gd 406 (593)
T KOG0695|consen 335 GGDLMFHMQRQR-----KLPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGD 406 (593)
T ss_pred Ccceeeehhhhh-----cCcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccchhhcCCCCCc
Confidence 999988887654 4889999999999999999999999 999999999999999999999999998764 2
Q ss_pred CCCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC-CCCCCHHHHHHHHhhhcccccccchhhhc
Q 006884 490 FPTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGH-DDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 490 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
..++.+||+.|+|||++.+..|...+|+|++||+++||+.|+.||+--.. +...+-..++-+++.+....- ++
T Consensus 407 ~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiri---pr--- 480 (593)
T KOG0695|consen 407 TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRI---PR--- 480 (593)
T ss_pred ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccc---cc---
Confidence 23567899999999999999999999999999999999999999984321 122233445544443332211 00
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCC
Q 006884 569 YQDVEEEMVQMLQIALSCVAKVPDSRP 595 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~P~~RP 595 (627)
.-......+++.-+++||.+|-
T Consensus 481 -----slsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 481 -----SLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred -----eeehhhHHHHHHhhcCCcHHhc
Confidence 0011223456677889999884
No 392
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=8.6e-30 Score=269.76 Aligned_cols=239 Identities=24% Similarity=0.364 Sum_probs=181.4
Q ss_pred hcccCcCCceE-EEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 339 AEVLGKGSYGS-TYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
.+++|.|+.|+ ||+|.+. |+.||||++-.. ...-..+|+..++.-.+|||||++++.-.++...|+..|.| ..+|
T Consensus 514 ~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e--~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC-~~sL 589 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGVYE-GREVAVKRLLEE--FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC-ACSL 589 (903)
T ss_pred HHHcccCCCCcEEEEEeeC-CceehHHHHhhH--hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-hhhH
Confidence 46799999875 7999996 899999988532 23445788988888779999999998877888899999999 5699
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC---C--CCeEEeecccccccCCC-
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ---D--LNGCISDVGLAHLINFP- 491 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~---~--~~~ki~DfG~a~~~~~~- 491 (627)
.+++.....+ .....-...+.+..|++.||++||+.+ ||||||||.||||+. + ..++|+|||+++.+...
T Consensus 590 ~dlie~~~~d-~~~~~~i~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~ 665 (903)
T KOG1027|consen 590 QDLIESSGLD-VEMQSDIDPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK 665 (903)
T ss_pred HHHHhccccc-hhhcccccHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEecccccccccCCCc
Confidence 9999863111 111111345678899999999999987 999999999999976 3 56899999999887543
Q ss_pred ------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhC-CCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006884 492 ------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTG-KAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 492 ------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
.+..||-||+|||++....-+..+||||+||++|+.++| +.||...-..+ ..++.......
T Consensus 666 sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~--------~NIl~~~~~L~---- 733 (903)
T KOG1027|consen 666 SSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ--------ANILTGNYTLV---- 733 (903)
T ss_pred chhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh--------hhhhcCcccee----
Confidence 344588999999999998888999999999999999995 89997542211 01111111111
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
......++ +..++|.+|++.+|..||++.+|+.
T Consensus 734 ---~L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 734 ---HLEPLPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred ---eeccCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 11111222 5667888999999999999999975
No 393
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=7.6e-29 Score=253.85 Aligned_cols=193 Identities=25% Similarity=0.369 Sum_probs=164.6
Q ss_pred cccCcCCceEEEEEEEcC-CcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 340 EVLGKGSYGSTYKAILED-GTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
+.||-|+||.|.+++..| ...+|.|.+++... .-....+|..|+... ..+=||+++..|.+++.+|+||+|++|
T Consensus 635 k~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEA-Dn~WVVrLyySFQDkdnLYFVMdYIPG 713 (1034)
T KOG0608|consen 635 KTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDNLYFVMDYIPG 713 (1034)
T ss_pred eeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhc-CCcceEEEEEEeccCCceEEEEeccCC
Confidence 569999999999998554 56789998876532 234567788888887 899999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC-----
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN----- 489 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~----- 489 (627)
|++-.+|-+. ..+.+..++.++..+..|+++.|..| +|||||||+|||||.+|++||.|||++.-+.
T Consensus 714 GDmMSLLIrm-----gIFeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHds 785 (1034)
T KOG0608|consen 714 GDMMSLLIRM-----GIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 785 (1034)
T ss_pred ccHHHHHHHh-----ccCHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeeeeccccccceecccc
Confidence 9999988764 35888888999999999999999999 9999999999999999999999999975431
Q ss_pred ----C-------C------------------------------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHH
Q 006884 490 ----F-------P------------------------------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEML 528 (627)
Q Consensus 490 ----~-------~------------------------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~ 528 (627)
. + ...+||+.|+|||++....|+..+|+||.|||||||+
T Consensus 786 kYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~ 865 (1034)
T KOG0608|consen 786 KYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEML 865 (1034)
T ss_pred ccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHh
Confidence 0 0 0113688999999999999999999999999999999
Q ss_pred hCCCCCCCCCCCC
Q 006884 529 TGKAPLQHSGHDD 541 (627)
Q Consensus 529 tg~~pf~~~~~~~ 541 (627)
.|+.||-.....+
T Consensus 866 ~g~~pf~~~tp~~ 878 (1034)
T KOG0608|consen 866 VGQPPFLADTPGE 878 (1034)
T ss_pred hCCCCccCCCCCc
Confidence 9999998765443
No 394
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3.3e-30 Score=239.58 Aligned_cols=190 Identities=23% Similarity=0.381 Sum_probs=159.3
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeC-----CceeEEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSK-----DEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~-----~~~~lv~ 409 (627)
.+.||-|+||.||.+++. +|+.||.|++..... ..+.+-+|++++..+ +|.|++..++..... .+.|+++
T Consensus 58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfF-kHdNVLSaLDILQPph~dfFqEiYV~T 136 (449)
T KOG0664|consen 58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSF-RHDNVLSLLDILQPANPSFFQELYVLT 136 (449)
T ss_pred CCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhh-ccccHHHHHHhcCCCCchHHHHHHHHH
Confidence 367999999999999965 799999999865432 457788999999999 999999998887643 2567888
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
|.|. .+|...+-. ...++-....-+..||++||+|||+.+ |.||||||.|.|++.|...||||||+++..+
T Consensus 137 ELmQ-SDLHKIIVS-----PQ~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLARvee 207 (449)
T KOG0664|consen 137 ELMQ-SDLHKIIVS-----PQALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLARTWD 207 (449)
T ss_pred HHHH-hhhhheecc-----CCCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEecccccccccc
Confidence 8884 477766642 346777888889999999999999998 9999999999999999999999999999875
Q ss_pred CCCC-----CCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 006884 490 FPTT-----ATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSG 538 (627)
Q Consensus 490 ~~~~-----~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~ 538 (627)
.... ...|..|.|||++.+ +.|+...||||.||++.|++.++.-|+..+
T Consensus 208 ~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~ 262 (449)
T KOG0664|consen 208 QRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAG 262 (449)
T ss_pred hhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccC
Confidence 4432 235778999999987 468999999999999999999999998654
No 395
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.8e-28 Score=228.13 Aligned_cols=256 Identities=20% Similarity=0.329 Sum_probs=187.8
Q ss_pred CCHHHHHHHHhcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeE-EeeCCcee
Q 006884 329 FDLEDLLRASAEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAY-YYSKDEKL 406 (627)
Q Consensus 329 ~~~~~l~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~-~~~~~~~~ 406 (627)
.++.|.. .+.+.+|+|.||.+-+++++ +.+.+|+|.+.......++|.+|..---.|+.|.||+..++. |+..+.+.
T Consensus 20 v~l~d~y-~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Yv 98 (378)
T KOG1345|consen 20 VDLEDVY-TINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYV 98 (378)
T ss_pred cchhhhh-hHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEE
Confidence 4454443 23678999999999999977 577899999998888999999999887788899999987654 55667777
Q ss_pred EEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEec--CCCCeEEeeccc
Q 006884 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLT--QDLNGCISDVGL 484 (627)
Q Consensus 407 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~--~~~~~ki~DfG~ 484 (627)
+++||++.|+|.+-+.. ..+-+....+++.|++.|+.|||+++ +||||||.+|||+- +...+|+||||.
T Consensus 99 F~qE~aP~gdL~snv~~------~GigE~~~K~v~~ql~SAi~fMHskn---lVHRdlK~eNiLif~~df~rvKlcDFG~ 169 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEA------AGIGEANTKKVFAQLLSAIEFMHSKN---LVHRDLKAENILIFDADFYRVKLCDFGL 169 (378)
T ss_pred EeeccCccchhhhhcCc------ccccHHHHHHHHHHHHHHHHHhhccc---hhhcccccceEEEecCCccEEEeeeccc
Confidence 89999999999888764 34778888999999999999999998 99999999999994 335799999999
Q ss_pred ccccCCCCC-CCCCccccCccccCCC-----CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006884 485 AHLINFPTT-ATRTIGYRAPEVTETR-----KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 485 a~~~~~~~~-~~~t~~y~aPE~~~~~-----~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
++..+..-. ...+..|.|||..... ...+.+|||.||++++.++||+.||+.....+ ....+|... .....
T Consensus 170 t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d-~~Y~~~~~w--~~rk~ 246 (378)
T KOG1345|consen 170 TRKVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMD-KPYWEWEQW--LKRKN 246 (378)
T ss_pred ccccCceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccC-chHHHHHHH--hcccC
Confidence 877653222 2245679999987543 34688999999999999999999999433222 233333322 11111
Q ss_pred ccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006884 559 AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMI 604 (627)
Q Consensus 559 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L 604 (627)
... ... +.... ...+++.++-+..+|++|-...++.++.
T Consensus 247 ~~~-P~~---F~~fs---~~a~r~Fkk~lt~~~~drcki~~~kk~r 285 (378)
T KOG1345|consen 247 PAL-PKK---FNPFS---EKALRLFKKSLTPRFKDRCKIWTAKKMR 285 (378)
T ss_pred ccC-chh---hcccC---HHHHHHHHHhcCCcccccchhHHHHHHH
Confidence 111 111 11112 2344555678889999995555555443
No 396
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=3.8e-27 Score=226.53 Aligned_cols=205 Identities=28% Similarity=0.504 Sum_probs=180.7
Q ss_pred cCcCCceEEEEEEEcC-CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHH
Q 006884 342 LGKGSYGSTYKAILED-GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 342 lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 418 (627)
||+|++|.||++...+ ++.+++|++..... ..+.+.+|++.+..+ .|++++++++++......++++||+++++|.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 79 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKL-NHPNIVKLYGVFEDENHLYLVMEYCEGGSLK 79 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhc-CCCCeeeEeeeeecCCeEEEEEecCCCCcHH
Confidence 6899999999999764 89999999876543 257799999999999 8999999999999989999999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC-CCCeEEeecccccccCCC----CC
Q 006884 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ-DLNGCISDVGLAHLINFP----TT 493 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~-~~~~ki~DfG~a~~~~~~----~~ 493 (627)
+++.... ..+++..+..++.++++++.|||+.+ ++|+||+|.||+++. ++.++|+|||.+...... ..
T Consensus 80 ~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~ 152 (215)
T cd00180 80 DLLKENE----GKLSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKT 152 (215)
T ss_pred HHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhc
Confidence 9987542 35889999999999999999999998 999999999999999 899999999999876543 22
Q ss_pred CCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 494 ATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
..+...|++||..... .++.+.|+|++|++++++
T Consensus 153 ~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------------------------------------------- 187 (215)
T cd00180 153 IVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------------------------------------- 187 (215)
T ss_pred ccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------------------
Confidence 3467789999999877 788999999999999999
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
..+.+++.+|++.+|++||++.++++.
T Consensus 188 ----~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ----PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ----HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 256678889999999999999999875
No 397
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=8.6e-29 Score=251.64 Aligned_cols=189 Identities=22% Similarity=0.338 Sum_probs=164.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccC---------HHHHHHHHHHHHHhc--cCCceeceeeEEeeCCcee
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAAT---------KREFEQQMEVVGTIG--KHSNVVPVRAYYYSKDEKL 406 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---------~~~~~~e~~~l~~l~--~h~niv~~~~~~~~~~~~~ 406 (627)
.+.+|+|+||.|+.+.++ +...|+||.+.+.+.- ...+-.|+.+|.++. .|+||++++.+|++++.+|
T Consensus 566 lq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~yy 645 (772)
T KOG1152|consen 566 LQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDYYY 645 (772)
T ss_pred eeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCCeeE
Confidence 478999999999999976 4667999988765321 124567999999993 3999999999999999999
Q ss_pred EEEecC-CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccc
Q 006884 407 VVYSYM-PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA 485 (627)
Q Consensus 407 lv~e~~-~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a 485 (627)
++||-. ++.+|.+++.... .+++..+..|+.||+.|+++||+++ |||||||-+|+.++.+|-+||+|||.|
T Consensus 646 l~te~hg~gIDLFd~IE~kp-----~m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~~klidfgsa 717 (772)
T KOG1152|consen 646 LETEVHGEGIDLFDFIEFKP-----RMDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGFVKLIDFGSA 717 (772)
T ss_pred EEecCCCCCcchhhhhhccC-----ccchHHHHHHHHHHHhccccccccC---ceecccccccEEEecCCeEEEeeccch
Confidence 999964 6679999998653 5899999999999999999999999 999999999999999999999999999
Q ss_pred cccCC--CCCCCCCccccCccccCCCCCC-CcchhHHHHHHHHHHHhCCCCCC
Q 006884 486 HLINF--PTTATRTIGYRAPEVTETRKAS-QKSDVYSFGVLLLEMLTGKAPLQ 535 (627)
Q Consensus 486 ~~~~~--~~~~~~t~~y~aPE~~~~~~~~-~~~Dv~S~Gvvl~el~tg~~pf~ 535 (627)
..... -.++.||.+|.|||++.+.+|- ..-|||++|++||.++....||.
T Consensus 718 a~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 718 AYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred hhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 77643 4577899999999999999885 55899999999999999999885
No 398
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.95 E-value=1.2e-28 Score=247.63 Aligned_cols=274 Identities=18% Similarity=0.265 Sum_probs=211.0
Q ss_pred CCCCCCCHHHHHHHHh---cccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhcc-----CCceec
Q 006884 324 GSYFNFDLEDLLRASA---EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK-----HSNVVP 394 (627)
Q Consensus 324 ~~~~~~~~~~l~~~~~---~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~-----h~niv~ 394 (627)
..|+.+.+.|++.... ...|+|-|++|..|... .|+.||||++.......+.=..|++++.+|.. --|+++
T Consensus 419 EGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclr 498 (752)
T KOG0670|consen 419 EGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLR 498 (752)
T ss_pred cceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHH
Confidence 3577888888887654 35689999999999954 58899999999887777888899999999952 347899
Q ss_pred eeeEEeeCCceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC
Q 006884 395 VRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD 474 (627)
Q Consensus 395 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~ 474 (627)
++..|...+++|+|+|-+ ..+|.+.|++... ...+....+..++.|+.-||..|...+ |+|.||||+|||+++.
T Consensus 499 l~r~F~hknHLClVFE~L-slNLRevLKKyG~--nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVNE~ 572 (752)
T KOG0670|consen 499 LFRHFKHKNHLCLVFEPL-SLNLREVLKKYGR--NVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVNES 572 (752)
T ss_pred HHHHhhhcceeEEEehhh-hchHHHHHHHhCc--ccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEeccC
Confidence 999999999999999987 4589999987644 345788889999999999999999988 9999999999999876
Q ss_pred -CCeEEeecccccccCCCCC--CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHH--
Q 006884 475 -LNGCISDVGLAHLINFPTT--ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWV-- 549 (627)
Q Consensus 475 -~~~ki~DfG~a~~~~~~~~--~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~-- 549 (627)
..+||||||.|........ +..+..|.|||++.|..|+...|+||.||+||||.||+..|.+...+++..+.--+
T Consensus 573 k~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KG 652 (752)
T KOG0670|consen 573 KNILKLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKG 652 (752)
T ss_pred cceeeeccCccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcC
Confidence 5579999999987754432 22455699999999999999999999999999999999999987766543221111
Q ss_pred ---HHHhhhc-ccccccchh--------------------------------hhcCC----ChHHHHHHHHHHHHHcccC
Q 006884 550 ---RSVVREE-WTAEVFDVE--------------------------------LLKYQ----DVEEEMVQMLQIALSCVAK 589 (627)
Q Consensus 550 ---~~~~~~~-~~~~~~d~~--------------------------------l~~~~----~~~~~~~~l~~l~~~Cl~~ 589 (627)
..+++.+ .....||.. +...+ ........|.+|+..|+..
T Consensus 653 k~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~L 732 (752)
T KOG0670|consen 653 KFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLIL 732 (752)
T ss_pred CCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhcc
Confidence 1111111 011111111 11111 1233456788899999999
Q ss_pred CCCCCCCHHHHHHH
Q 006884 590 VPDSRPKMDDVVRM 603 (627)
Q Consensus 590 ~P~~RPs~~ev~~~ 603 (627)
||++|.|..+++++
T Consensus 733 dP~KRit~nqAL~H 746 (752)
T KOG0670|consen 733 DPEKRITVNQALKH 746 (752)
T ss_pred ChhhcCCHHHHhcC
Confidence 99999999998764
No 399
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.95 E-value=5.5e-28 Score=219.58 Aligned_cols=251 Identities=15% Similarity=0.256 Sum_probs=186.3
Q ss_pred hcccCcCCceEEEEEE-EcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCC--ceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAI-LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD--EKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~--~~~lv~e~~~~g 415 (627)
.+++|+|.++.||.|. ..+.+.++||+++.. .++.+.+|+.++..+..||||+++++...+.. ...+|+||.++-
T Consensus 43 vrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV--kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~ 120 (338)
T KOG0668|consen 43 VRKVGRGKYSEVFEGINITNNEKCVIKILKPV--KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNT 120 (338)
T ss_pred HHHHcCccHhhHhcccccCCCceEEEeeechH--HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhccc
Confidence 5789999999999998 457889999999864 46778999999999988999999999987654 567999999988
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC-CCCeEEeecccccccCCCCCC
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ-DLNGCISDVGLAHLINFPTTA 494 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~-~~~~ki~DfG~a~~~~~~~~~ 494 (627)
+...... .++...+...+.+++.||.|+|++| |.|||+||.|+++|. .-.++|+|+|+|.+.......
T Consensus 121 Dfk~ly~--------tl~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eY 189 (338)
T KOG0668|consen 121 DFKQLYP--------TLTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY 189 (338)
T ss_pred cHHHHhh--------hhchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeechhhceeeeeecchHhhcCCCcee
Confidence 7766554 3666788889999999999999999 999999999999986 467899999999998765443
Q ss_pred ---CCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhc------ccccccch
Q 006884 495 ---TRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREE------WTAEVFDV 564 (627)
Q Consensus 495 ---~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~------~~~~~~d~ 564 (627)
..+..|--||.+-. ..|+..-|+|||||++..|+..+.||-....+ ..++++...-.-.++ ...-..|+
T Consensus 190 nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN-~DQLVkIakVLGt~el~~Yl~KY~i~Ldp 268 (338)
T KOG0668|consen 190 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-YDQLVKIAKVLGTDELYAYLNKYQIDLDP 268 (338)
T ss_pred eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCC-HHHHHHHHHHhChHHHHHHHHHHccCCCh
Confidence 35667889998754 56899999999999999999999998643221 112222111000000 00001121
Q ss_pred hhh---------------cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 565 ELL---------------KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 565 ~l~---------------~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.+. ......-...+.++++.+.+..|..+|+|++|.+.+
T Consensus 269 ~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 269 QFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred hHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 110 000001111355677778889999999999999763
No 400
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.94 E-value=3.9e-27 Score=224.60 Aligned_cols=246 Identities=22% Similarity=0.331 Sum_probs=183.3
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeC------CceeEEE
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSK------DEKLVVY 409 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~------~~~~lv~ 409 (627)
..+|.|+- .|..+.+. .+++||+|++.... ...+...+|...+..+ .|+||++++.++... .+.|+||
T Consensus 23 ~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v-~~~nii~l~n~ftP~~~l~~~~e~y~v~ 100 (369)
T KOG0665|consen 23 KPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCV-NHKNIISLLNVFTPQKTLEEFQEVYLVM 100 (369)
T ss_pred cccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhh-cccceeeeeeccCccccHHHHHhHHHHH
Confidence 56888887 56666533 58999999886542 2356678899999999 999999999998754 3568999
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
|+| .++|...+.. .++-.....|..|++.|++|||+.+ |+||||||+||++..+..+||.|||+|+..+
T Consensus 101 e~m-~~nl~~vi~~-------elDH~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg~ar~e~ 169 (369)
T KOG0665|consen 101 ELM-DANLCQVILM-------ELDHETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFGLARTED 169 (369)
T ss_pred Hhh-hhHHHHHHHH-------hcchHHHHHHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccchhhcccC
Confidence 999 4589888873 2666788899999999999999999 9999999999999999999999999998765
Q ss_pred CC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHH----------------
Q 006884 490 FP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVR---------------- 550 (627)
Q Consensus 490 ~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~---------------- 550 (627)
.. +....|..|.|||++.+..+.+.+||||.||++.||++|+.-|.+.+ .+.+|..
T Consensus 170 ~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d-----~idQ~~ki~~~lgtpd~~F~~qL 244 (369)
T KOG0665|consen 170 TDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKD-----HIDQWNKIIEQLGTPDPSFMKQL 244 (369)
T ss_pred cccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCch-----HHHHHHHHHHHhcCCCHHHHHHh
Confidence 43 34456788999999988889999999999999999999999887542 2222221
Q ss_pred -----HHhhhcc--c----cccc-chhhhcCC-ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 551 -----SVVREEW--T----AEVF-DVELLKYQ-DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 551 -----~~~~~~~--~----~~~~-d~~l~~~~-~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
..++... . .+.+ |..+.... ...-......+++.+||-.+|++|.++++++++
T Consensus 245 ~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 245 QPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred hHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 1111000 0 0000 10000000 001122345678889999999999999999763
No 401
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=1.1e-25 Score=219.33 Aligned_cols=190 Identities=28% Similarity=0.457 Sum_probs=167.5
Q ss_pred hcccCcCCceEEEEEEEcC-CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILED-GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|++|.||++...+ ++.+++|.+..... ..+.+.+|++.+.++ +|+|++++++++......++++||++++
T Consensus 4 ~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 82 (225)
T smart00221 4 GKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKL-KHPNIVKLYGVFEDPEPLYLVMEYCEGG 82 (225)
T ss_pred eeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhC-CCCChhhheeeeecCCceEEEEeccCCC
Confidence 3679999999999999774 88999999876533 467888999999999 9999999999999989999999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~---- 491 (627)
+|.+++..... .+++.....++.+++.++.|||+.+ ++|+|++|+||+++.++.++|+|||.+......
T Consensus 83 ~L~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~ 155 (225)
T smart00221 83 DLFDYLRKKGG----KLSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAAL 155 (225)
T ss_pred CHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccc
Confidence 99999986431 1789999999999999999999998 999999999999999999999999999877544
Q ss_pred -CCCCCCccccCcccc-CCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 006884 492 -TTATRTIGYRAPEVT-ETRKASQKSDVYSFGVLLLEMLTGKAPLQH 536 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~-~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~ 536 (627)
....++..|++||.. ....++.++|||+||++++||++|+.||..
T Consensus 156 ~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 156 LKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 234467789999998 677788899999999999999999999965
No 402
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.93 E-value=7.9e-27 Score=241.20 Aligned_cols=242 Identities=23% Similarity=0.338 Sum_probs=189.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
...+|.|.||.|||++.+ .+...|+|+++... ...+...+|+-+++.- +||||+.++|-|...+..+++|||+.+|+
T Consensus 20 lqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc-~h~nivay~gsylr~dklwicMEycgggs 98 (829)
T KOG0576|consen 20 LQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDC-RHPNIVAYFGSYLRRDKLWICMEYCGGGS 98 (829)
T ss_pred eeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecC-CCcChHHHHhhhhhhcCcEEEEEecCCCc
Confidence 367999999999999955 68999999998653 3456677777777777 99999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC----CCC
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN----FPT 492 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~----~~~ 492 (627)
|.+..+-. .++++.+....+....+|++|||+.+ =+|||||-.||++++.|.+|++|||.+..+. ...
T Consensus 99 lQdiy~~T-----gplselqiayvcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvsaqitati~Krk 170 (829)
T KOG0576|consen 99 LQDIYHVT-----GPLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRK 170 (829)
T ss_pred ccceeeec-----ccchhHHHHHHHhhhhccchhhhcCC---cccccccccceeecccCceeecccCchhhhhhhhhhhh
Confidence 99887643 57899999999999999999999998 7999999999999999999999999987664 345
Q ss_pred CCCCCccccCcccc---CCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 493 TATRTIGYRAPEVT---ETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 493 ~~~~t~~y~aPE~~---~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
.+.||+.|||||+. ..+.|..++|||+.|++..|+-.-+.|......- .. .. + ....-+++.-.
T Consensus 171 sfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm-----r~-l~--L---mTkS~~qpp~l-- 237 (829)
T KOG0576|consen 171 SFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM-----RA-LF--L---MTKSGFQPPTL-- 237 (829)
T ss_pred cccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH-----HH-HH--H---hhccCCCCCcc--
Confidence 67899999999986 3467899999999999999998877774322110 00 00 0 01111222111
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.+.......|-++++-|+.++|++||+++.++.
T Consensus 238 kDk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 238 KDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred cCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 111223345566777899999999999987654
No 403
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.92 E-value=7.1e-25 Score=205.63 Aligned_cols=170 Identities=21% Similarity=0.258 Sum_probs=128.7
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCCC
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTA 494 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~~ 494 (627)
|+|.++++.. +..++|..++.++.|++.||.|||+++ ||+|||++.++.+|+ ||.++...... .
T Consensus 1 GsL~~~l~~~----~~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~~-~ 64 (176)
T smart00750 1 VSLADILEVR----GRPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPEQ-S 64 (176)
T ss_pred CcHHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeecccc-C
Confidence 6899999754 246999999999999999999999875 999999999999999 99988765432 3
Q ss_pred CCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHH
Q 006884 495 TRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEE 574 (627)
Q Consensus 495 ~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 574 (627)
.+|+.|+|||++.+..++.++|||||||++|||++|+.||..... ..................+ ......
T Consensus 65 ~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~-----~~~~~~ 134 (176)
T smart00750 65 RVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERE-----LSAILEILLNGMPADDPRD-----RSNLES 134 (176)
T ss_pred CCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccch-----hcHHHHHHHHHhccCCccc-----cccHHH
Confidence 678999999999999999999999999999999999999964321 1111111111111000000 001111
Q ss_pred HH--HHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 575 EM--VQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 575 ~~--~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
.. ..+.+++.+||..+|++||++.|+++++..+...
T Consensus 135 ~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 135 VSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred HHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 11 2578899999999999999999999999887544
No 404
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.92 E-value=2.7e-25 Score=220.02 Aligned_cols=187 Identities=25% Similarity=0.430 Sum_probs=159.1
Q ss_pred hcccCcCCceEEEEEEEc----CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE----DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.++||+|.|++||++.+. ....||+|.+.... .-..+..|++++..++.+.||+++.+++..++...+|+||++.
T Consensus 41 v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H 119 (418)
T KOG1167|consen 41 VNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEH 119 (418)
T ss_pred hccccccchhhhhhhhHhhhccccceEeeeeccccc-CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccCc
Confidence 578999999999999854 36789999986543 3455899999999999999999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC-CCeEEeecccccccC----
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD-LNGCISDVGLAHLIN---- 489 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~-~~~ki~DfG~a~~~~---- 489 (627)
..-.+++.. ++...+...+..+..||.++|+.| ||||||||.|+|.+.. +.-.|+|||+|...+
T Consensus 120 ~~f~~l~~~--------l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~ 188 (418)
T KOG1167|consen 120 DRFRDLYRS--------LSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQ 188 (418)
T ss_pred cCHHHHHhc--------CCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEEechhHHHHHhhhh
Confidence 998888763 678889999999999999999999 9999999999999864 667899999986110
Q ss_pred -------------C----------------C---------------CCCCCCccccCccccC-CCCCCCcchhHHHHHHH
Q 006884 490 -------------F----------------P---------------TTATRTIGYRAPEVTE-TRKASQKSDVYSFGVLL 524 (627)
Q Consensus 490 -------------~----------------~---------------~~~~~t~~y~aPE~~~-~~~~~~~~Dv~S~Gvvl 524 (627)
. + ....||+||.|||++. ....++++||||-||++
T Consensus 189 ~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~ 268 (418)
T KOG1167|consen 189 TEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVIL 268 (418)
T ss_pred hhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeecccee
Confidence 0 0 0123799999999975 45678999999999999
Q ss_pred HHHHhCCCCCCCC
Q 006884 525 LEMLTGKAPLQHS 537 (627)
Q Consensus 525 ~el~tg~~pf~~~ 537 (627)
+-+++++.||-..
T Consensus 269 Lslls~~~PFf~a 281 (418)
T KOG1167|consen 269 LSLLSRRYPFFKA 281 (418)
T ss_pred ehhhccccccccC
Confidence 9999999998643
No 405
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.92 E-value=2.1e-25 Score=256.84 Aligned_cols=187 Identities=18% Similarity=0.218 Sum_probs=136.2
Q ss_pred CceeceeeEE-------eeCCceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeec
Q 006884 390 SNVVPVRAYY-------YSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHG 462 (627)
Q Consensus 390 ~niv~~~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~ 462 (627)
+||+.++++| ...+..+.++||+ +++|.+++... ...+++..++.++.||++||.|||+++ |+||
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~~g---IvHr 104 (793)
T PLN00181 33 DYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP----DRSVDAFECFHVFRQIVEIVNAAHSQG---IVVH 104 (793)
T ss_pred HHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc----cccccHHHHHHHHHHHHHHHHHHHhCC---eeec
Confidence 5777777776 2234566778887 66999999743 245899999999999999999999998 9999
Q ss_pred CCCCCCeEecC-------------------CCCeEEeecccccccCCC--------------------CCCCCCccccCc
Q 006884 463 NIKSSNVLLTQ-------------------DLNGCISDVGLAHLINFP--------------------TTATRTIGYRAP 503 (627)
Q Consensus 463 Dlkp~NILl~~-------------------~~~~ki~DfG~a~~~~~~--------------------~~~~~t~~y~aP 503 (627)
||||+|||++. ++.+||+|||+++..... ....+|+.||||
T Consensus 105 DlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 184 (793)
T PLN00181 105 NVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSP 184 (793)
T ss_pred cCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceECh
Confidence 99999999954 456677788877642110 012367789999
Q ss_pred cccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHH
Q 006884 504 EVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIA 583 (627)
Q Consensus 504 E~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~ 583 (627)
|++.+..++.++|||||||+||||++|..|+.... ......... ...+.. ........+++
T Consensus 185 E~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--------~~~~~~~~~-----~~~~~~------~~~~~~~~~~~ 245 (793)
T PLN00181 185 EEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS--------RTMSSLRHR-----VLPPQI------LLNWPKEASFC 245 (793)
T ss_pred hhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH--------HHHHHHHHh-----hcChhh------hhcCHHHHHHH
Confidence 99999999999999999999999999988765311 011111100 011100 11122345677
Q ss_pred HHcccCCCCCCCCHHHHHHH
Q 006884 584 LSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 584 ~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.+||+++|.+||++.|++++
T Consensus 246 ~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 246 LWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred HHhCCCChhhCcChHHHhhc
Confidence 89999999999999999874
No 406
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.91 E-value=3.4e-25 Score=206.24 Aligned_cols=256 Identities=23% Similarity=0.384 Sum_probs=191.8
Q ss_pred CCCHHHHHHHHhcccCcCCceEEEEEEEcCCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCc
Q 006884 328 NFDLEDLLRASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDE 404 (627)
Q Consensus 328 ~~~~~~l~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~ 404 (627)
-++..++.. ..+|.+...|..|+|++. |..+++|++.... ...++|..|.-.++-+ .||||.+++|.|....+
T Consensus 186 gid~~~lnl--~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrif-shpnilpvlgacnsppn 261 (448)
T KOG0195|consen 186 GIDVSSLNL--ITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIF-SHPNILPVLGACNSPPN 261 (448)
T ss_pred Ccchhhhhh--hhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeee-cCCchhhhhhhccCCCC
Confidence 355555532 356888999999999997 5667788775432 2356788888777777 99999999999999999
Q ss_pred eeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccc
Q 006884 405 KLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGL 484 (627)
Q Consensus 405 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~ 484 (627)
..++..||+.|+|+..++... +..++-.++.+++.++|+|++|||+.. +-|..--|.+..+++|++.+++|+ .+-
T Consensus 262 lv~isq~mp~gslynvlhe~t---~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltaris-mad 336 (448)
T KOG0195|consen 262 LVIISQYMPFGSLYNVLHEQT---SVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARIS-MAD 336 (448)
T ss_pred ceEeeeeccchHHHHHHhcCc---cEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhhee-ccc
Confidence 999999999999999999753 356788899999999999999999986 334445789999999999999985 122
Q ss_pred ccccCCCCCCCCCccccCccccCCCCC---CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccc
Q 006884 485 AHLINFPTTATRTIGYRAPEVTETRKA---SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEV 561 (627)
Q Consensus 485 a~~~~~~~~~~~t~~y~aPE~~~~~~~---~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (627)
+++..........+.||+||.++..+. -..+|+|||++++||+.|...||.....-++.- ++..++..
T Consensus 337 ~kfsfqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgm------kialeglr--- 407 (448)
T KOG0195|consen 337 TKFSFQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGM------KIALEGLR--- 407 (448)
T ss_pred ceeeeeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhh------hhhhcccc---
Confidence 222222334456789999999976554 367999999999999999999998654322210 11111111
Q ss_pred cchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhc
Q 006884 562 FDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQ 608 (627)
Q Consensus 562 ~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~ 608 (627)
..-.+.....+.+++.-|+..||.+||.+..|+-.|++|+
T Consensus 408 -------v~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 408 -------VHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred -------ccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 1111222345667777899999999999999999999986
No 407
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.89 E-value=4.3e-23 Score=244.16 Aligned_cols=185 Identities=36% Similarity=0.649 Sum_probs=141.8
Q ss_pred hhHHHHHHHHHhhCCC--CCCCCCCCCCCCCCCccceEeeCCCCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCc
Q 006884 28 NSDKQALLDFADAVPH--ARKLNWNAAAPVCSSWIGVTCNVNRSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNY 105 (627)
Q Consensus 28 ~~~~~~l~~~~~~~~~--~~~~~W~~~~~~c~~w~gv~C~~~~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~ 105 (627)
..|..||++||+.+.+ ....+|+..+++| .|.||+|+. .++|+.|+|++|++.|.++. .|..+++|+.|+|++|+
T Consensus 28 ~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~c-~w~gv~c~~-~~~v~~L~L~~~~i~~~~~~-~~~~l~~L~~L~Ls~n~ 104 (968)
T PLN00113 28 AEELELLLSFKSSINDPLKYLSNWNSSADVC-LWQGITCNN-SSRVVSIDLSGKNISGKISS-AIFRLPYIQTINLSNNQ 104 (968)
T ss_pred HHHHHHHHHHHHhCCCCcccCCCCCCCCCCC-cCcceecCC-CCcEEEEEecCCCccccCCh-HHhCCCCCCEEECCCCc
Confidence 4789999999999843 3455897655555 899999985 46899999999999999887 89999999999999999
Q ss_pred CCCCCCCCcC-ccccccEEeeccccccccCchhhccccceeccccccccCCCchhhhccccccccccccccccccCCCC-
Q 006884 106 LNGTLPSDIT-SISSLQYVYLQNNYFSGVLPAFRSLQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL- 183 (627)
Q Consensus 106 l~~~~p~~~~-~l~~L~~L~ls~N~l~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~- 183 (627)
++|.+|..+. .+++|++|+|++|++++.+|.....+|++|+|++|.+++.+|..++++++|++|+|++|.+.+.+|..
T Consensus 105 ~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~ 184 (968)
T PLN00113 105 LSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSL 184 (968)
T ss_pred cCCcCChHHhccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhh
Confidence 9999998765 88999999999999888777544446777777777777666777777777777777777766666643
Q ss_pred -CCCccceEeccCCCccccCCCcCCCCCCCccc
Q 006884 184 -NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV 215 (627)
Q Consensus 184 -~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~ 215 (627)
++++|++|+|++|.+++.+|..++++++|+.+
T Consensus 185 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 217 (968)
T PLN00113 185 TNLTSLEFLTLASNQLVGQIPRELGQMKSLKWI 217 (968)
T ss_pred hhCcCCCeeeccCCCCcCcCChHHcCcCCccEE
Confidence 56666666666666666666665555555544
No 408
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=8e-22 Score=189.01 Aligned_cols=251 Identities=18% Similarity=0.242 Sum_probs=193.8
Q ss_pred hcccCcCCceEEEEEE-EcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 339 AEVLGKGSYGSTYKAI-LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
.++||+|.||..+.|+ +-++++||||.-. .....-+...|....+.|...+.|..++.+-.++-+..+|+|.+ |.+|
T Consensus 33 GkKIGeGsFG~lf~G~Nl~nne~VAIKfEP-rkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-GPSL 110 (449)
T KOG1165|consen 33 GKKIGEGSFGVLFLGKNLYNNEPVAIKFEP-RKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-GPSL 110 (449)
T ss_pred ccccccCcceeeecccccccCceEEEEecc-ccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-CcCH
Confidence 5889999999999999 5578999999643 23344567889999999989999999988888888888999988 8899
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC-----CCeEEeecccccccCCCC
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD-----LNGCISDVGLAHLINFPT 492 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~-----~~~ki~DfG~a~~~~~~~ 492 (627)
.++..-. ++.++..+.+.+|.|++.-++|+|++. +|.|||||+|+||... ..+.|+|||+|+...++.
T Consensus 111 EDLFD~C----gR~FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~ 183 (449)
T KOG1165|consen 111 EDLFDLC----GRRFSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPK 183 (449)
T ss_pred HHHHHHh----cCcccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEeccchhhhcCcc
Confidence 9988765 457999999999999999999999998 9999999999999753 457899999999875543
Q ss_pred C-----------CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccc
Q 006884 493 T-----------ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEV 561 (627)
Q Consensus 493 ~-----------~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (627)
+ ..||.+||+-....+++.+.+.|+=|+|-++.+.+.|..||++...... .+....+-.......+
T Consensus 184 TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tn---K~kYeKIGe~Kr~T~i 260 (449)
T KOG1165|consen 184 TKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTN---KEKYEKIGETKRSTPI 260 (449)
T ss_pred ccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcch---HHHHHHhccccccCCH
Confidence 3 3489999999999999999999999999999999999999998654322 1111111111111110
Q ss_pred cchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhc
Q 006884 562 FDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQ 608 (627)
Q Consensus 562 ~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~ 608 (627)
. .+ -.+.+++....++.++ ..+-++-|..+-+...+..+.
T Consensus 261 -~-~L--c~g~P~efa~Yl~yvR---~L~F~E~PDYdylr~Lf~dvl 300 (449)
T KOG1165|consen 261 -E-VL--CEGFPEEFATYLRYVR---RLDFFETPDYDYLRKLFDDVL 300 (449)
T ss_pred -H-HH--HhcCHHHHHHHHHHHH---hcCcccCCCHHHHHHHHHHHH
Confidence 1 01 1235677777777766 467777788877777666553
No 409
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=1.4e-21 Score=200.46 Aligned_cols=152 Identities=18% Similarity=0.236 Sum_probs=118.5
Q ss_pred hcccCcCCceEEEEEEEc--CCcEEEEEEecccc------cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILE--DGTTVVVKRLREVA------ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~------~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||+||+|+.+ +++.||||++.... ...+.+.+|++++..+ +|+|+++.+.. .+..++|||
T Consensus 23 ~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L-~h~~iv~~l~~---~~~~~LVmE 98 (365)
T PRK09188 23 TAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTV-RGIGVVPQLLA---TGKDGLVRG 98 (365)
T ss_pred ccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhc-cCCCCCcEEEE---cCCcEEEEE
Confidence 467999999999999865 57778999865321 1245689999999999 89999864332 246799999
Q ss_pred cCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC-CCCCeEecCCCCeEEeecccccccC
Q 006884 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNI-KSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dl-kp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
|++|++|... .. .. ...++.++++||.|||+.+ |+|||| ||+|||++.++.+||+|||+|+...
T Consensus 99 ~~~G~~L~~~-~~--------~~---~~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~ 163 (365)
T PRK09188 99 WTEGVPLHLA-RP--------HG---DPAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPDGEAAVIDFQLASVFR 163 (365)
T ss_pred ccCCCCHHHh-Cc--------cc---hHHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCCCCEEEEECccceecc
Confidence 9999999632 11 01 1457889999999999998 999999 9999999999999999999998664
Q ss_pred CCC------------CCCCCccccCccccCCC
Q 006884 490 FPT------------TATRTIGYRAPEVTETR 509 (627)
Q Consensus 490 ~~~------------~~~~t~~y~aPE~~~~~ 509 (627)
... +..+++.|+|||++...
T Consensus 164 ~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 164 RRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred cCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 322 12356789999998654
No 410
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=2.8e-20 Score=191.50 Aligned_cols=253 Identities=20% Similarity=0.260 Sum_probs=186.6
Q ss_pred hcccCcCCceEEEEEEEcCC--cEEEEEEecccccC-HHHHHHHHHHHHHhcc---CCceeceeeEE-eeCCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILEDG--TTVVVKRLREVAAT-KREFEQQMEVVGTIGK---HSNVVPVRAYY-YSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~--~~vavK~~~~~~~~-~~~~~~e~~~l~~l~~---h~niv~~~~~~-~~~~~~~lv~e~ 411 (627)
.+.||+|+||.||.+...+. ..+|+|........ ...+..|..++..+.. -+++..++... ......++||+.
T Consensus 23 ~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l 102 (322)
T KOG1164|consen 23 GKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSL 102 (322)
T ss_pred eeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEec
Confidence 47899999999999997653 47888876554221 2267888888888852 35788888887 467778999997
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC-----CCeEEeeccccc
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD-----LNGCISDVGLAH 486 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~-----~~~ki~DfG~a~ 486 (627)
+ |.+|.++..... ...++..+.++|+.|++.+|.+||+.| ++||||||.|+++... ..+.|.|||+++
T Consensus 103 ~-G~sL~dl~~~~~---~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar 175 (322)
T KOG1164|consen 103 L-GPSLEDLRKRNP---PGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR 175 (322)
T ss_pred c-CccHHHHHHhCC---CCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence 7 889999876553 357999999999999999999999999 9999999999999865 468999999998
Q ss_pred ccC---C-----------CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHH
Q 006884 487 LIN---F-----------PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSV 552 (627)
Q Consensus 487 ~~~---~-----------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~ 552 (627)
... . .....||..|.+++...+...+.+.|+||++.++.|++.|..||........ ...+...
T Consensus 176 ~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~---~~~~~~~ 252 (322)
T KOG1164|consen 176 RFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL---KSKFEKD 252 (322)
T ss_pred cccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch---HHHHHHH
Confidence 321 1 1123489999999999999999999999999999999999999975432211 1111111
Q ss_pred hhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 553 VREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 553 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
........ .....+.+...+.. .+-..+..++|....+...|++.....
T Consensus 253 ~~~~~~~~-------~~~~~~~~~~~~~~---~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 253 PRKLLTDR-------FGDLKPEEFAKILE---YIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred hhhhcccc-------ccCCChHHHHHHHH---HhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 11111100 11122344444444 344589999999999999988875543
No 411
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.85 E-value=1.5e-19 Score=186.31 Aligned_cols=252 Identities=27% Similarity=0.371 Sum_probs=189.4
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCC-ceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHS-NVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~-niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||.|+||.||++... ..+++|.+..... ....+.+|+.++..+ .|+ +++++...+......+++++++.
T Consensus 5 ~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~ 81 (384)
T COG0515 5 LRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASL-NHPPNIVKLYDFFQDEGSLYLVMEYVD 81 (384)
T ss_pred EEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHc-cCCcceeeEEEEEecCCEEEEEEecCC
Confidence 367899999999999987 7899999876532 366799999999999 555 89999999977777899999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC-CeEEeecccccccCCC-
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL-NGCISDVGLAHLINFP- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~-~~ki~DfG~a~~~~~~- 491 (627)
++++.+++...... ..+.......++.|++.++.|+|+.+ ++|||+||+||+++..+ .++++|||.++.....
T Consensus 82 ~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 82 GGSLEDLLKKIGRK--GPLSESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCcHHHHHHhcccc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 99999777654211 25888899999999999999999998 99999999999999998 7999999998755322
Q ss_pred ---------CCCCCCccccCccccCC---CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccc
Q 006884 492 ---------TTATRTIGYRAPEVTET---RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTA 559 (627)
Q Consensus 492 ---------~~~~~t~~y~aPE~~~~---~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 559 (627)
....++..|+|||...+ ..+....|+||+|++++++++|..||...... ................
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~ 233 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS---SATSQTLKIILELPTP 233 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc---ccHHHHHHHHHhcCCc
Confidence 34457899999999987 57889999999999999999999997654321 0011111111111111
Q ss_pred cccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 560 EVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 560 ~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
........... ......+.+++..|+..+|..|.++.+....
T Consensus 234 -~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 234 -SLASPLSPSNP-ELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred -ccccccCcccc-chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 00000000000 1223456678889999999999999987765
No 412
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.84 E-value=1.2e-21 Score=214.33 Aligned_cols=245 Identities=22% Similarity=0.292 Sum_probs=177.5
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecc---cccCHH----HHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLRE---VAATKR----EFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~---~~~~~~----~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+++|.|++|.|+..... .....+.|..+. ...... .+..|+.+-..+ .|+|++..+..+.+.....-.||
T Consensus 323 ~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l-~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 323 GRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSL-SHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred cceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccc-cCCchhhhHHHHhhcccchhhhh
Confidence 578999999988777633 334444443321 111111 144566666667 99999888877777776666799
Q ss_pred cCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC
Q 006884 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF 490 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 490 (627)
|+++ +|..++... ..+...++-.++.|+..|++|+|+.| |.|||+|++|++++.++.+||+|||.+.....
T Consensus 402 ~~~~-Dlf~~~~~~-----~~~~~~e~~c~fKqL~~Gv~y~h~~G---iahrdlK~enll~~~~g~lki~Dfg~~~vf~~ 472 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSN-----GKLTPLEADCFFKQLLRGVKYLHSMG---LAHRDLKLENLLVTENGILKIIDFGAASVFRY 472 (601)
T ss_pred cccH-HHHHHHhcc-----cccchhhhhHHHHHHHHHHHHHHhcC---ceeccCccccEEEecCCceEEeecCcceeecc
Confidence 9999 999999764 24777888899999999999999999 99999999999999999999999999876643
Q ss_pred C--------CCCCCCccccCccccCCCCCCC-cchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccc
Q 006884 491 P--------TTATRTIGYRAPEVTETRKASQ-KSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEV 561 (627)
Q Consensus 491 ~--------~~~~~t~~y~aPE~~~~~~~~~-~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (627)
+ ....|+..|+|||++.+..|++ ..||||.|+++..|.+|+.||......+... ........
T Consensus 473 ~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~---------~~~~~~~~ 543 (601)
T KOG0590|consen 473 PWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF---------KTNNYSDQ 543 (601)
T ss_pred CcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch---------hhhccccc
Confidence 2 2344778899999999999976 4899999999999999999998655443211 00000000
Q ss_pred cchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 562 FDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 562 ~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
+........-.......-..++.++++.+|.+|.|+++|++
T Consensus 544 ~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 544 RNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred cccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 00000000111222334556888999999999999999987
No 413
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.84 E-value=2e-20 Score=171.93 Aligned_cols=193 Identities=22% Similarity=0.282 Sum_probs=161.3
Q ss_pred hcccCcCCceEEEEEE-EcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 339 AEVLGKGSYGSTYKAI-LEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
.++||.|+||.+|.|. ..+|..||||.-... ....+...|..+...++....|..+..+..+.+...+||+.+ |.+|
T Consensus 20 vrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~-a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL-GPsL 97 (341)
T KOG1163|consen 20 VRKIGSGSFGDIYLGISITSGEEVAIKLESSK-AKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL-GPSL 97 (341)
T ss_pred EEeecCCchhheeeeeeccCCceEEEEeeccc-CCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc-CccH
Confidence 4789999999999998 568999999975432 234456778888888877788888888888888999999988 8899
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC---CCeEEeecccccccCCC---
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD---LNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~---~~~ki~DfG~a~~~~~~--- 491 (627)
.+...-.. +.++..+.+-+|.|++.-++|+|.++ ++||||||+|+|+.-+ ..+.++|||+|+...+.
T Consensus 98 EdLfnfC~----R~ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~ 170 (341)
T KOG1163|consen 98 EDLFNFCS----RRFTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTR 170 (341)
T ss_pred HHHHHHHh----hhhhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEEeccchhhhcccccc
Confidence 99887653 45888999999999999999999999 9999999999999654 45789999999876432
Q ss_pred --------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCC
Q 006884 492 --------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHD 540 (627)
Q Consensus 492 --------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~ 540 (627)
..-.||.+|.+-....+...+.+.|+=|+|.+|.+.-.|..||++....
T Consensus 171 ~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~ 227 (341)
T KOG1163|consen 171 QHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAA 227 (341)
T ss_pred ccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchh
Confidence 2234788998877777777889999999999999999999999986543
No 414
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.83 E-value=1.1e-19 Score=169.37 Aligned_cols=182 Identities=14% Similarity=0.133 Sum_probs=140.9
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHH-----HHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKR-----EFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-----~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
...|++|+||+||.+.. .+.+++.+.+.......+ .+.+|++++.++.+|+++..++++ +..+++|||++
T Consensus 7 ~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~ 81 (218)
T PRK12274 7 NEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLA 81 (218)
T ss_pred ceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeec
Confidence 46799999999997766 578888888766544333 588999999999777889988886 45689999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC-CCCCeEecCCCCeEEeecccccccCCCC
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNI-KSSNVLLTQDLNGCISDVGLAHLINFPT 492 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dl-kp~NILl~~~~~~ki~DfG~a~~~~~~~ 492 (627)
|.+|...+.. ....++.|++.+|.++|+.| |+|||| ||+|||++.++.++|+|||++.......
T Consensus 82 G~~L~~~~~~------------~~~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 82 GAAMYQRPPR------------GDLAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred CccHHhhhhh------------hhHHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 9998654321 11346788999999999999 999999 7999999999999999999998654332
Q ss_pred C-----------------CCCCccccCccccCC--CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCC
Q 006884 493 T-----------------ATRTIGYRAPEVTET--RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHD 540 (627)
Q Consensus 493 ~-----------------~~~t~~y~aPE~~~~--~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~ 540 (627)
. ..+++.|++|+...- ..--...++++-|.-+|.++|+..+..+..+.
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~~ 213 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDNEG 213 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccCCC
Confidence 1 013667777775432 22336789999999999999999987665443
No 415
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.82 E-value=5e-20 Score=173.90 Aligned_cols=138 Identities=12% Similarity=0.157 Sum_probs=106.6
Q ss_pred cccCcCCceEEEEEEEcCCcEEEEEEeccccc---C-------H-----------------HHHHHHHHHHHHhccCCce
Q 006884 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAA---T-------K-----------------REFEQQMEVVGTIGKHSNV 392 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~-------~-----------------~~~~~e~~~l~~l~~h~ni 392 (627)
+.||+|+||.||+|...+|+.||||+++.... . . .....|++.+.++ .++++
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~v 81 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRL-VTAGI 81 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHH-HHCCC
Confidence 57999999999999988899999999875421 1 0 1223488899998 67766
Q ss_pred eceeeEEeeCCceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHH-HhcCCCCeeecCCCCCCeEe
Q 006884 393 VPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFI-HSEGGAKFTHGNIKSSNVLL 471 (627)
Q Consensus 393 v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~L-H~~~~~~ivH~Dlkp~NILl 471 (627)
.....+.. ...++||||++++++...... ...+++....+++.|++.+|.|+ |+.+ |+||||||+|||+
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~-----~~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlkP~NIli 151 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLK-----DAPLSESKARELYLQVIQIMRILYQDCR---LVHADLSEYNLLY 151 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhh-----cCCCCHHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEE
Confidence 43333222 234899999998877544322 13588899999999999999999 6877 9999999999999
Q ss_pred cCCCCeEEeecccccccC
Q 006884 472 TQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 472 ~~~~~~ki~DfG~a~~~~ 489 (627)
+ ++.++|+|||+|....
T Consensus 152 ~-~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 152 H-DGKLYIIDVSQSVEHD 168 (190)
T ss_pred E-CCcEEEEEccccccCC
Confidence 8 5789999999987553
No 416
>PLN03150 hypothetical protein; Provisional
Probab=99.81 E-value=1.3e-19 Score=201.14 Aligned_cols=133 Identities=33% Similarity=0.619 Sum_probs=97.7
Q ss_pred cCChhHHHHHHHHHhhCCCCCCCCCCCCCCCC----CCccceEeeCCC----CcEEEEEcCCCCcccccCccccCCCCcc
Q 006884 25 ADLNSDKQALLDFADAVPHARKLNWNAAAPVC----SSWIGVTCNVNR----SRVIGIHLPGIGFTGPIPANSIGKLDAL 96 (627)
Q Consensus 25 ~~~~~~~~~l~~~~~~~~~~~~~~W~~~~~~c----~~w~gv~C~~~~----~~v~~L~l~~~~l~~~~~~~~~~~l~~L 96 (627)
.....|..||+.+|..+......+|+. ++| +.|.||.|.... ..|+.|+|++|++.|.+|. .++.|++|
T Consensus 368 ~t~~~~~~aL~~~k~~~~~~~~~~W~g--~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~-~i~~L~~L 444 (623)
T PLN03150 368 KTLLEEVSALQTLKSSLGLPLRFGWNG--DPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPN-DISKLRHL 444 (623)
T ss_pred ccCchHHHHHHHHHHhcCCcccCCCCC--CCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCH-HHhCCCCC
Confidence 345579999999999986544458964 345 379999996321 2488899999999888888 78888888
Q ss_pred cEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhccccceeccccccccCCCchhhhccccccccccccccc
Q 006884 97 KILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSI 176 (627)
Q Consensus 97 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 176 (627)
+.|+|++|+|+|.+|..++.+++|+.|+|++|+++| .+|..+++|++|+.|+|++|+|
T Consensus 445 ~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg----------------------~iP~~l~~L~~L~~L~Ls~N~l 502 (623)
T PLN03150 445 QSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNG----------------------SIPESLGQLTSLRILNLNGNSL 502 (623)
T ss_pred CEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCC----------------------CCchHHhcCCCCCEEECcCCcc
Confidence 888888888888888888888887777666666655 4555556666666666666666
Q ss_pred cccCCC
Q 006884 177 SGAIPP 182 (627)
Q Consensus 177 ~~~~~~ 182 (627)
+|.+|.
T Consensus 503 ~g~iP~ 508 (623)
T PLN03150 503 SGRVPA 508 (623)
T ss_pred cccCCh
Confidence 655553
No 417
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.81 E-value=3.5e-19 Score=168.84 Aligned_cols=138 Identities=16% Similarity=0.209 Sum_probs=108.8
Q ss_pred cccCcCCceEEEEEEEcCCcEEEEEEecccccC---------------------------HHHHHHHHHHHHHhccCCce
Q 006884 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAAT---------------------------KREFEQQMEVVGTIGKHSNV 392 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---------------------------~~~~~~e~~~l~~l~~h~ni 392 (627)
..||+|+||.||+|+..+|+.||||+++..... ...+..|.+.+.++ .|+++
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i 81 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRL-YEAGV 81 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHH-HhCCC
Confidence 579999999999999878999999998754210 11235678888888 78887
Q ss_pred eceeeEEeeCCceeEEEecCCCCcHHHH-hhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCeE
Q 006884 393 VPVRAYYYSKDEKLVVYSYMPAGSLFML-LHRNRSDGGTALDWNSRMKIALGTARGIAFIHS-EGGAKFTHGNIKSSNVL 470 (627)
Q Consensus 393 v~~~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~Dlkp~NIL 470 (627)
.....+... ..++||||++++++... +.. ..++.....+++.+++.++.++|+ .+ |+||||||+||+
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~------~~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~NIl 150 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD------VPLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLSEYNIL 150 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhh------ccCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCChhhEE
Confidence 554444332 34799999998855433 332 246778889999999999999999 88 999999999999
Q ss_pred ecCCCCeEEeecccccccCC
Q 006884 471 LTQDLNGCISDVGLAHLINF 490 (627)
Q Consensus 471 l~~~~~~ki~DfG~a~~~~~ 490 (627)
++ ++.++|+|||++.....
T Consensus 151 l~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 151 YH-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred EE-CCCEEEEEcccceecCC
Confidence 99 89999999999987643
No 418
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.81 E-value=1.2e-19 Score=173.10 Aligned_cols=163 Identities=12% Similarity=0.158 Sum_probs=126.4
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHH----------HHHHHHHHHHhccCCceeceeeEEeeC------
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKRE----------FEQQMEVVGTIGKHSNVVPVRAYYYSK------ 402 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~----------~~~e~~~l~~l~~h~niv~~~~~~~~~------ 402 (627)
.+++|.|+||.||.... ++..+|||.+.......+. +++|++.+.++ .|++|..+..++...
T Consensus 36 ~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL-~~~GI~~~~d~~~~~~~~~~~ 113 (232)
T PRK10359 36 IKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRV-RSEGLASLNDFYLLAERKTLR 113 (232)
T ss_pred EEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHH-HHCCCCcceEeeeeccccccc
Confidence 57899999999999766 5778999999755332222 58888899999 999999998886543
Q ss_pred --CceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEe
Q 006884 403 --DEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCIS 480 (627)
Q Consensus 403 --~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~ 480 (627)
...+++|||++|.+|.++.. ++. ....+++.++..+|+.+ ++|||+||+||+++.++ ++|+
T Consensus 114 ~~~~~~lvmEyi~G~tL~~~~~---------~~~----~~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~g-i~li 176 (232)
T PRK10359 114 YAHTYIMLIEYIEGVELNDMPE---------ISE----DVKAKIKASIESLHQHG---MVSGDPHKGNFIVSKNG-LRII 176 (232)
T ss_pred ccCCeEEEEEEECCccHHHhhh---------ccH----HHHHHHHHHHHHHHHcC---CccCCCChHHEEEeCCC-EEEE
Confidence 35789999999999977732 222 24568999999999998 99999999999999988 9999
Q ss_pred ecccccccCCCCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHH
Q 006884 481 DVGLAHLINFPTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEML 528 (627)
Q Consensus 481 DfG~a~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~ 528 (627)
|||........... ..+.....+..++|+||||+++..+.
T Consensus 177 Dfg~~~~~~e~~a~--------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 177 DLSGKRCTAQRKAK--------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred ECCCcccccchhhH--------HHHHHHhHhcccccccceeEeehHHH
Confidence 99987655321110 11344556778999999999987654
No 419
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.78 E-value=5.5e-19 Score=184.48 Aligned_cols=210 Identities=22% Similarity=0.380 Sum_probs=160.3
Q ss_pred cCCceeceeeEEeeCCceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCC
Q 006884 388 KHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSS 467 (627)
Q Consensus 388 ~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~ 467 (627)
.|.|+.+++|.+.++...+.|.+|+..|+|.+.+... ...++|.-...+..+++.||.|+|... -..|+.+++.
T Consensus 5 ~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~----~~~~d~~F~~s~~rdi~~Gl~ylh~s~--i~~hg~l~s~ 78 (484)
T KOG1023|consen 5 DHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE----DIKLDYFFILSFIRDISKGLAYLHNSP--IGYHGALKSS 78 (484)
T ss_pred chhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc----ccCccHHHHHHHHHHHHHHHHHHhcCc--ceeeeeeccc
Confidence 8999999999999999999999999999999999863 356899999999999999999999865 2299999999
Q ss_pred CeEecCCCCeEEeecccccccCCC------CCCCCCccccCccccCCCC-------CCCcchhHHHHHHHHHHHhCCCCC
Q 006884 468 NVLLTQDLNGCISDVGLAHLINFP------TTATRTIGYRAPEVTETRK-------ASQKSDVYSFGVLLLEMLTGKAPL 534 (627)
Q Consensus 468 NILl~~~~~~ki~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~-------~~~~~Dv~S~Gvvl~el~tg~~pf 534 (627)
|.++|....+||+|||+....... .......-|.|||.+.... .+.+.||||||++++|+++.+.||
T Consensus 79 nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~ 158 (484)
T KOG1023|consen 79 NCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPF 158 (484)
T ss_pred cceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcc
Confidence 999999999999999998776421 0111223599999986631 467799999999999999999999
Q ss_pred CCCCCCCCC-CHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 535 QHSGHDDVV-DLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 535 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
+........ .+...++. .....+.+...... +...++..++.+||..+|++||++++|-..++.+....
T Consensus 159 ~~~~~~~~~~eii~~~~~-----~~~~~~rP~i~~~~---e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~ 228 (484)
T KOG1023|consen 159 DLRNLVEDPDEIILRVKK-----GGSNPFRPSIELLN---ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKGG 228 (484)
T ss_pred ccccccCChHHHHHHHHh-----cCCCCcCcchhhhh---hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcccc
Confidence 864433221 22222211 11111222221111 22236788899999999999999999999998886654
No 420
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.77 E-value=1.1e-19 Score=189.45 Aligned_cols=186 Identities=25% Similarity=0.373 Sum_probs=157.3
Q ss_pred ccCcCCceEEEEEE----EcCCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 341 VLGKGSYGSTYKAI----LEDGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 341 ~lg~G~~g~Vy~~~----~~~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+|+|+||.|+.++ ...|..+|.|++++... .+.....|..++.....||.++.+...++.+...+++.+|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 37999999998865 23467788888765421 122455677788888679999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCC
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTT 493 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~ 493 (627)
+|+|...+... ..+.+.........++-+++++|+.+ |+|||+|++||+++.+|++++.|||+++..-....
T Consensus 81 gg~lft~l~~~-----~~f~~~~~~~~~aelaLald~lh~l~---iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~ 152 (612)
T KOG0603|consen 81 GGDLFTRLSKE-----VMFDELDVAFYLAELALALDHLHKLG---IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI 152 (612)
T ss_pred cchhhhccccC-----CchHHHHHHHHHHHHHHHHhhcchhH---HHHhcccccceeecccCccccCCchhhhHhHhhhh
Confidence 99998887654 34666667777788899999999998 99999999999999999999999999988766555
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQH 536 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~ 536 (627)
.+||..|||||++. .....+|.||||++++||+||..||..
T Consensus 153 ~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 153 ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 68999999999998 578899999999999999999999985
No 421
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.77 E-value=1.5e-18 Score=170.30 Aligned_cols=193 Identities=18% Similarity=0.255 Sum_probs=134.7
Q ss_pred ccCCceeceeeEEee---------------------------CCceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHH
Q 006884 387 GKHSNVVPVRAYYYS---------------------------KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMK 439 (627)
Q Consensus 387 ~~h~niv~~~~~~~~---------------------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~ 439 (627)
.+|||||.+.++|.+ ....|+||...+ .+|.+|+..+ ..+...+.-
T Consensus 273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~------~~s~r~~~~ 345 (598)
T KOG4158|consen 273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTR------HRSYRTGRV 345 (598)
T ss_pred CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcC------CCchHHHHH
Confidence 479999999988753 123688888774 4899999753 356666777
Q ss_pred HHHHHHHHHHHHHhcCCCCeeecCCCCCCeEec--CCCC--eEEeecccccccCC-------CC---CCCCCccccCccc
Q 006884 440 IALGTARGIAFIHSEGGAKFTHGNIKSSNVLLT--QDLN--GCISDVGLAHLINF-------PT---TATRTIGYRAPEV 505 (627)
Q Consensus 440 i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~--~~~~--~ki~DfG~a~~~~~-------~~---~~~~t~~y~aPE~ 505 (627)
|+.|+++|+.|||.+| |.|||+|++|||+. +|+. ..|+|||.+-.-+. .+ ...|...-||||+
T Consensus 346 ~laQlLEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi 422 (598)
T KOG4158|consen 346 ILAQLLEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEI 422 (598)
T ss_pred HHHHHHHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhh
Confidence 8999999999999999 99999999999984 4443 46899997643221 11 1224567999999
Q ss_pred cCCCC------CCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHH
Q 006884 506 TETRK------ASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQM 579 (627)
Q Consensus 506 ~~~~~------~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l 579 (627)
....+ --.|+|.|+.|-+.||+++...||....+-. .+...+ ++.....+ .+.....+
T Consensus 423 ~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~-L~~r~Y-----qe~qLPal----------p~~vpp~~ 486 (598)
T KOG4158|consen 423 ATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEML-LDTRTY-----QESQLPAL----------PSRVPPVA 486 (598)
T ss_pred hhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchhe-echhhh-----hhhhCCCC----------cccCChHH
Confidence 86543 2368999999999999999999998643211 121111 11111111 11222345
Q ss_pred HHHHHHcccCCCCCCCCHHHHHHHHH
Q 006884 580 LQIALSCVAKVPDSRPKMDDVVRMIE 605 (627)
Q Consensus 580 ~~l~~~Cl~~~P~~RPs~~ev~~~L~ 605 (627)
.+++...++.+|++|++..-....|.
T Consensus 487 rqlV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 487 RQLVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred HHHHHHHhcCCccccCCccHHHhHHH
Confidence 67788889999999999876666554
No 422
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.77 E-value=4.3e-19 Score=174.46 Aligned_cols=230 Identities=17% Similarity=0.274 Sum_probs=142.2
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhcc---------CCceeceeeEEe----
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIGK---------HSNVVPVRAYYY---- 400 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~---------h~niv~~~~~~~---- 400 (627)
.+.||.|+++.||.+++. .++.+|+|++..... ..+++.+|.-....+.. |-.++..++...
T Consensus 17 ~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~ 96 (288)
T PF14531_consen 17 GRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGK 96 (288)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS
T ss_pred ccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCC
Confidence 468999999999999976 489999998754322 23455555533333211 222222222221
Q ss_pred -----eCC--------ceeEEEecCCCCcHHHHhhhcCC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCC
Q 006884 401 -----SKD--------EKLVVYSYMPAGSLFMLLHRNRS--DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIK 465 (627)
Q Consensus 401 -----~~~--------~~~lv~e~~~~gsL~~~l~~~~~--~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk 465 (627)
... +.+++|+-+ -+||.+++..-.. .....+....++.+..|+++.+++||+.| ++|+||+
T Consensus 97 ~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G---lVHgdi~ 172 (288)
T PF14531_consen 97 PPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG---LVHGDIK 172 (288)
T ss_dssp -SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EEEST-S
T ss_pred CcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc---eEecccc
Confidence 111 235677777 5588777543111 11223455677888899999999999999 9999999
Q ss_pred CCCeEecCCCCeEEeecccccccCCCCC-CCCCccccCccccCC--------CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 006884 466 SSNVLLTQDLNGCISDVGLAHLINFPTT-ATRTIGYRAPEVTET--------RKASQKSDVYSFGVLLLEMLTGKAPLQH 536 (627)
Q Consensus 466 p~NILl~~~~~~ki~DfG~a~~~~~~~~-~~~t~~y~aPE~~~~--------~~~~~~~Dv~S~Gvvl~el~tg~~pf~~ 536 (627)
|+|++++.+|.++|+||+.....+.... ...+..|.+||.... -.++.+.|.|++|+++|.|+.+..||..
T Consensus 173 ~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~ 252 (288)
T PF14531_consen 173 PENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGL 252 (288)
T ss_dssp GGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCC
T ss_pred eeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCC
Confidence 9999999999999999987765543322 334577999997644 2478899999999999999999999986
Q ss_pred CCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCC
Q 006884 537 SGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSR 594 (627)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~R 594 (627)
........ .. +..+.+....+..+|..+++.+|++|
T Consensus 253 ~~~~~~~~-------------------~~---f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 253 SSPEADPE-------------------WD---FSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp CGGGSTSG-------------------GG---GTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred CCcccccc-------------------cc---chhcCCcCHHHHHHHHHHccCCcccC
Confidence 43221110 01 11222344455667789999999987
No 423
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.76 E-value=7.3e-19 Score=191.84 Aligned_cols=238 Identities=24% Similarity=0.309 Sum_probs=169.4
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccc--cCHHHHHHHHHHH-HHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVA--ATKREFEQQMEVV-GTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~e~~~l-~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||++.|=+|.+++.+.|. |+||++.+.. ...+.|.++++-+ ..+.+|||.+++.-.-..+...|+|-+|...
T Consensus 28 ~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqyvkh- 105 (1431)
T KOG1240|consen 28 VENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQYVKH- 105 (1431)
T ss_pred ecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHHHhh-
Confidence 467999999999999988776 9999986543 3445555544332 3344999999988776667777888888754
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc--C--CC
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI--N--FP 491 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~--~--~~ 491 (627)
+|++.+... ..+...+...|+.|++.|+.-+|..| |+|||||.+|||++.-.=+.|+||-.-+.. . .+
T Consensus 106 nLyDRlSTR-----PFL~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNP 177 (1431)
T KOG1240|consen 106 NLYDRLSTR-----PFLVLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNP 177 (1431)
T ss_pred hhhhhhccc-----hHHHHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhcccccCCccCCCCCc
Confidence 888888643 35777888999999999999999999 999999999999999888999999765432 1 11
Q ss_pred C-------CCCCCccccCccccCCC----------C-CCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHH
Q 006884 492 T-------TATRTIGYRAPEVTETR----------K-ASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSV 552 (627)
Q Consensus 492 ~-------~~~~t~~y~aPE~~~~~----------~-~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~ 552 (627)
. +...-..|+|||.+-.. . .+++-||||.||++.||++ |++||.-. +.+.
T Consensus 178 adf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS---------QL~a-- 246 (1431)
T KOG1240|consen 178 ADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS---------QLLA-- 246 (1431)
T ss_pred ccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH---------HHHh--
Confidence 1 11123469999987431 1 4678899999999999988 68888621 1110
Q ss_pred hhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 553 VREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 553 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.+.....|++..-.+ . +-..+.+++..|++.||++|-++++.++.
T Consensus 247 ---Yr~~~~~~~e~~Le~-I--ed~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 247 ---YRSGNADDPEQLLEK-I--EDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred ---HhccCccCHHHHHHh-C--cCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 001101111110000 0 00145678889999999999999999886
No 424
>PRK10345 hypothetical protein; Provisional
Probab=99.74 E-value=2e-17 Score=157.54 Aligned_cols=134 Identities=12% Similarity=0.147 Sum_probs=103.2
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEeccc-ccCHHHHHHHHHHHHHhc----cCCceeceeeEEeeCC---cee-EEE
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREV-AATKREFEQQMEVVGTIG----KHSNVVPVRAYYYSKD---EKL-VVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~----~h~niv~~~~~~~~~~---~~~-lv~ 409 (627)
.+.||+|+||.||. .-.++. .+||++... ....+.+.+|+.++..+. .||||++++|++.++. ..+ +|+
T Consensus 7 ~~~LG~G~~~~Vy~-hp~~~~-k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~ 84 (210)
T PRK10345 7 QSPLGTGRHRKCYA-HPEDAQ-RCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIA 84 (210)
T ss_pred cceecCCCceEEEE-CCCCcC-eEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEe
Confidence 36899999999996 323344 479987653 234567999999999994 4799999999998874 323 689
Q ss_pred ec--CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHH-HHHHhcCCCCeeecCCCCCCeEecC----CCCeEEeec
Q 006884 410 SY--MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGI-AFIHSEGGAKFTHGNIKSSNVLLTQ----DLNGCISDV 482 (627)
Q Consensus 410 e~--~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l-~~LH~~~~~~ivH~Dlkp~NILl~~----~~~~ki~Df 482 (627)
|| +++|+|.+++.+. .+++. ..++.+++.++ +|||+++ |+||||||+|||++. +..++|+||
T Consensus 85 e~~G~~~~tL~~~l~~~------~~~e~--~~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 85 DFDGKPSITLTEFAEQC------RYEED--VAQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred cCCCCcchhHHHHHHcc------cccHh--HHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 99 5679999999643 24444 35577778777 9999998 999999999999974 347999995
Q ss_pred ccc
Q 006884 483 GLA 485 (627)
Q Consensus 483 G~a 485 (627)
+.+
T Consensus 154 ~G~ 156 (210)
T PRK10345 154 IGE 156 (210)
T ss_pred CCC
Confidence 443
No 425
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.74 E-value=3.6e-18 Score=190.29 Aligned_cols=185 Identities=24% Similarity=0.319 Sum_probs=148.2
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhc--cCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIG--KHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~--~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
...||+|+||.||+|...+|+.||+|+-+....+ +|..-.+++.+|. --+.|..+..++.-.+..++|+||.+.|+
T Consensus 703 ~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W--EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~~~Gt 780 (974)
T KOG1166|consen 703 SKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW--EFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYSPYGT 780 (974)
T ss_pred EeeeccccceEEEEeecCCCcEEEEEeecCCCce--eeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeecccccc
Confidence 4679999999999999888999999987655433 2333333444441 12445556556666778889999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEec-------CCCCeEEeecccccccC
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLT-------QDLNGCISDVGLAHLIN 489 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~-------~~~~~ki~DfG~a~~~~ 489 (627)
|.+++..+ ..++|.....+..|+++.++.||..+ |||+||||+|+||. +...++|+|||.+-.+.
T Consensus 781 lld~~N~~-----~~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~ 852 (974)
T KOG1166|consen 781 LLDLINTN-----KVMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMK 852 (974)
T ss_pred HHHhhccC-----CCCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCCCcccceEEEecccceeee
Confidence 99999843 46899999999999999999999998 99999999999994 24567999999986542
Q ss_pred ---CCC---CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCC
Q 006884 490 ---FPT---TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAP 533 (627)
Q Consensus 490 ---~~~---~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p 533 (627)
... ...+|-++-.+|...++.+++.+|.|.++-+++-|+.|+.-
T Consensus 853 lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 853 LFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred EcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 221 23457789999999999999999999999999999999753
No 426
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.70 E-value=1.7e-16 Score=153.45 Aligned_cols=133 Identities=19% Similarity=0.351 Sum_probs=112.2
Q ss_pred cccCcCCceEEEEEEEcCCcEEEEEEeccccc---------CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAA---------TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
+.||+|++|.||+|.. +|..+++|+...... ....+.+|++++..+ .|+++.....++...+..+++||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~~~~lv~e 79 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRA-RKAGVNVPAVYFVDPENFIIVME 79 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCeEEEEeCCCCEEEEE
Confidence 5699999999999988 577899997653221 124577889999998 88888877777777788899999
Q ss_pred cCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccc
Q 006884 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHL 487 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~ 487 (627)
|++|++|.+++... .+ .+..++.+++.+|.++|+.+ ++|||++|.||+++ ++.++|+|||.++.
T Consensus 80 ~~~G~~L~~~~~~~--------~~-~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 80 YIEGEPLKDLINSN--------GM-EELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EeCCcCHHHHHHhc--------cH-HHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999998642 12 78889999999999999998 99999999999999 88999999998765
No 427
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.69 E-value=2.4e-16 Score=150.88 Aligned_cols=130 Identities=18% Similarity=0.310 Sum_probs=106.2
Q ss_pred ccCcCCceEEEEEEEcCCcEEEEEEecccc--c-------CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEec
Q 006884 341 VLGKGSYGSTYKAILEDGTTVVVKRLREVA--A-------TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 341 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~-------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
.||+|+||.||+|.+. +..|++|...... . ...++.+|++++..+ .|+++.....++...+..++||||
T Consensus 1 ~ig~G~~~~vy~~~~~-~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~~~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFL-GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRA-RKAGVNTPVVYDVDPDNKTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEeecC-CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHH-HHCCCCCCEEEEEECCCCEEEEEE
Confidence 4899999999999964 7889999864321 1 125577899999999 777766666666667778899999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
++|++|.+++.... . .++.+++.+|.+||+.+ ++|||++|.||+++ ++.++++|||.++..
T Consensus 79 ~~g~~l~~~~~~~~------~------~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 79 IEGKPLKDVIEEGN------D------ELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred ECCccHHHHHhhcH------H------HHHHHHHHHHHHHHHCC---eecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 99999998875421 0 78899999999999998 99999999999999 899999999998653
No 428
>smart00090 RIO RIO-like kinase.
Probab=99.69 E-value=2.8e-16 Score=153.51 Aligned_cols=139 Identities=16% Similarity=0.221 Sum_probs=105.9
Q ss_pred hcccCcCCceEEEEEE--EcCCcEEEEEEeccccc-------------------------CHHHHHHHHHHHHHhccCCc
Q 006884 339 AEVLGKGSYGSTYKAI--LEDGTTVVVKRLREVAA-------------------------TKREFEQQMEVVGTIGKHSN 391 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~--~~~~~~vavK~~~~~~~-------------------------~~~~~~~e~~~l~~l~~h~n 391 (627)
.+.||+|+||.||+|. ..+|+.||+|+++.... ....+..|++.+.++ .+..
T Consensus 33 ~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L-~~~~ 111 (237)
T smart00090 33 GGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL-YEAG 111 (237)
T ss_pred CCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH-HhcC
Confidence 5789999999999998 56899999999864321 012356789999998 4422
Q ss_pred --eeceeeEEeeCCceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCe
Q 006884 392 --VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNV 469 (627)
Q Consensus 392 --iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NI 469 (627)
+..++++ ...++||||+++++|....... ..........++.|++.++.+||+.+ .++||||||+||
T Consensus 112 i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~g--~iiH~Dikp~NI 180 (237)
T smart00090 112 VPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD-----VEPEEEEEFELYDDILEEMRKLYKEG--ELVHGDLSEYNI 180 (237)
T ss_pred CCCCeeeEe----cCceEEEEEecCCccccccccc-----CCcchHHHHHHHHHHHHHHHHHHhcC--CEEeCCCChhhE
Confidence 3333332 2357999999998886654221 23455667889999999999999986 499999999999
Q ss_pred EecCCCCeEEeecccccccCC
Q 006884 470 LLTQDLNGCISDVGLAHLINF 490 (627)
Q Consensus 470 Ll~~~~~~ki~DfG~a~~~~~ 490 (627)
+++ ++.++|+|||.+.....
T Consensus 181 li~-~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 181 LVH-DGKVVIIDVSQSVELDH 200 (237)
T ss_pred EEE-CCCEEEEEChhhhccCC
Confidence 999 88999999999876543
No 429
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.67 E-value=5e-16 Score=170.89 Aligned_cols=131 Identities=19% Similarity=0.284 Sum_probs=107.4
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEe-ccccc--------CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEE
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRL-REVAA--------TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~-~~~~~--------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 409 (627)
.+.||+|+||.||+|.+.+. .+++|+. ..... ..+.+.+|++++..+ +|++++....++......++||
T Consensus 338 ~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~~~~lv~ 415 (535)
T PRK09605 338 DHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEA-RRAGVPTPVIYDVDPEEKTIVM 415 (535)
T ss_pred cceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhh-cccCCCeeEEEEEeCCCCEEEE
Confidence 47899999999999997644 3444432 21111 124678899999999 8999988887877777889999
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
||+++++|.+++. ....++.+++.+|.|||+.+ ++||||||+|||+ +++.++|+|||+++..
T Consensus 416 E~~~g~~L~~~l~-------------~~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 416 EYIGGKDLKDVLE-------------GNPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred EecCCCcHHHHHH-------------HHHHHHHHHHHHHHHHHhCC---CccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 9999999998875 24578999999999999998 9999999999999 6789999999998754
No 430
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.67 E-value=6.3e-16 Score=147.73 Aligned_cols=132 Identities=17% Similarity=0.199 Sum_probs=103.1
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEeccccc-----------------------CHHHHHHHHHHHHHhccCCc--ee
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAA-----------------------TKREFEQQMEVVGTIGKHSN--VV 393 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----------------------~~~~~~~e~~~l~~l~~h~n--iv 393 (627)
.+.||+|+||.||++..++|+.||||++..... ....+..|..++..+ .|++ +.
T Consensus 20 ~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~v~ 98 (198)
T cd05144 20 GNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKAL-YEEGFPVP 98 (198)
T ss_pred CCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHH-HHcCCCCC
Confidence 478999999999999988899999998654221 112356778888888 6663 33
Q ss_pred ceeeEEeeCCceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC
Q 006884 394 PVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ 473 (627)
Q Consensus 394 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~ 473 (627)
..++ ....++||||+++++|...... .....++.+++.++.++|+.+ ++||||||+||++++
T Consensus 99 ~~~~----~~~~~lv~e~~~g~~L~~~~~~-----------~~~~~~~~~i~~~l~~lh~~g---i~H~Dl~p~Nill~~ 160 (198)
T cd05144 99 KPID----WNRHAVVMEYIDGVELYRVRVL-----------EDPEEVLDEILEEIVKAYKHG---IIHGDLSEFNILVDD 160 (198)
T ss_pred ceee----cCCceEEEEEeCCcchhhcccc-----------ccHHHHHHHHHHHHHHHHHCC---CCcCCCCcccEEEcC
Confidence 3333 2455899999999998655321 234578889999999999988 999999999999999
Q ss_pred CCCeEEeecccccccC
Q 006884 474 DLNGCISDVGLAHLIN 489 (627)
Q Consensus 474 ~~~~ki~DfG~a~~~~ 489 (627)
++.++|+|||.+....
T Consensus 161 ~~~~~liDfg~~~~~~ 176 (198)
T cd05144 161 DEKIYIIDWPQMVSTD 176 (198)
T ss_pred CCcEEEEECCccccCC
Confidence 9999999999986554
No 431
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.64 E-value=9.6e-18 Score=146.56 Aligned_cols=146 Identities=27% Similarity=0.459 Sum_probs=131.2
Q ss_pred CCCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhcc-cccee
Q 006884 67 NRSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSL-QLNAL 145 (627)
Q Consensus 67 ~~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~-~L~~L 145 (627)
+..++|.|.|++|.++ .+|+ .++.|.+|+.|++++|+|+ .+|.++.++++|+.|+++-|++.-.+-.|+.. .|+.|
T Consensus 31 ~~s~ITrLtLSHNKl~-~vpp-nia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~~lprgfgs~p~levl 107 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPP-NIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLNILPRGFGSFPALEVL 107 (264)
T ss_pred chhhhhhhhcccCcee-ecCC-cHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhhcCccccCCCchhhhh
Confidence 3468999999999999 6777 6999999999999999999 89999999999999999999999888888775 79999
Q ss_pred ccccccccC-CCchhhhccccccccccccccccccCCCC-CCCccceEeccCCCccccCCCcCCCCCCCcccC
Q 006884 146 DLSFNAFTG-NIPPGFQNLTRLHLLNLQNNSISGAIPPL-NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 146 ~ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
||++|+++. .+|..|..++.|+.|+|+.|.|.-.+|+. .+++|+.|.+.+|.+- ++|..++.++.|+-+.
T Consensus 108 dltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelh 179 (264)
T KOG0617|consen 108 DLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELH 179 (264)
T ss_pred hccccccccccCCcchhHHHHHHHHHhcCCCcccCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHh
Confidence 999999964 58999999999999999999998555555 8999999999999998 8999999888877654
No 432
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.62 E-value=2.1e-15 Score=137.02 Aligned_cols=135 Identities=18% Similarity=0.122 Sum_probs=112.5
Q ss_pred cccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccC-CceeceeeEEeeCCceeEEEecCCCCcHH
Q 006884 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKH-SNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h-~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 418 (627)
+.||+|.++.||++...+ ..+++|....... ...+..|+.++..+.++ .++.+++.+....+..++++||++++.+.
T Consensus 4 ~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~ 81 (155)
T cd05120 4 KLLKGGLTNRVYLLGTKD-EDYVLKINPSREK-GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLD 81 (155)
T ss_pred eecccccccceEEEEecC-CeEEEEecCCCCc-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecc
Confidence 579999999999999864 7899998865433 56789999999999544 68888888887778899999999887664
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
.+ +......++.+++.++.++|......++|+|++|+||+++.++.++++|||.++..
T Consensus 82 ~~------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 82 EV------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred cC------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 32 45666788999999999999864445999999999999999999999999988654
No 433
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.61 E-value=3.6e-16 Score=160.23 Aligned_cols=118 Identities=25% Similarity=0.382 Sum_probs=103.5
Q ss_pred ceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecc
Q 006884 404 EKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVG 483 (627)
Q Consensus 404 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG 483 (627)
..++.|+++.-.+|.+|+.+.+. ....++...+.++.|++.|+.| ++ .+|||+||.||++..+..+||.|||
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~--~e~~s~s~~~~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgDFg 401 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRT--GEERSLSLMLDIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGDFG 401 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCc--ccccchhHHHHHHHhhccchhh---cc---chhhhccccccccccchhhhhhhhh
Confidence 46789999999999999975543 4567888999999999999999 66 9999999999999999999999999
Q ss_pred cccccCCC----------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh
Q 006884 484 LAHLINFP----------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT 529 (627)
Q Consensus 484 ~a~~~~~~----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t 529 (627)
+....... ....||..||+||.+.+..|+.|+||||+|++|+|+++
T Consensus 402 l~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 402 LVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred heeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 98665332 23457899999999999999999999999999999998
No 434
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.59 E-value=6.6e-16 Score=169.02 Aligned_cols=196 Identities=21% Similarity=0.305 Sum_probs=130.1
Q ss_pred hcccCcCCceEEEEEEEcC-CcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 339 AEVLGKGSYGSTYKAILED-GTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
.+.|..|+||.||.++++. .+.+|.|+ .+. .-+.+. ++... ..|.+| |+-
T Consensus 88 IklisngAygavylvrh~~trqrfa~ki-Nkq----~lilRn--ilt~a-~npfvv---------------------gDc 138 (1205)
T KOG0606|consen 88 IKLISNGAYGAVYLVRHKETRQRFAMKI-NKQ----NLILRN--ILTFA-GNPFVV---------------------GDC 138 (1205)
T ss_pred eEeeccCCCCceeeeeccccccchhhcc-ccc----chhhhc--ccccc-CCccee---------------------chh
Confidence 4789999999999998763 56777743 221 111110 11111 333333 344
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC------
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP------ 491 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~------ 491 (627)
...++.. ..++. +.+.+++|+|+.+ |+|||+||+|.+|+.-|++|+.|||+++.....
T Consensus 139 ~tllk~~-----g~lPv--------dmvla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~ 202 (1205)
T KOG0606|consen 139 ATLLKNI-----GPLPV--------DMVLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLK 202 (1205)
T ss_pred hhhcccC-----CCCcc--------hhhHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhhhhhhhccchhh
Confidence 4444321 12222 2277899999998 999999999999999999999999998764211
Q ss_pred -------------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006884 492 -------------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 492 -------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
...+||+.|+|||++....|...+|+|++|+++||.+-|+.||.+...++ .+.+.+.+...
T Consensus 203 eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpee------lfg~visd~i~ 276 (1205)
T KOG0606|consen 203 EGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE------LFGQVISDDIE 276 (1205)
T ss_pred hcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHH------HHhhhhhhhcc
Confidence 12357999999999999999999999999999999999999998764332 22333322110
Q ss_pred -ccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCC
Q 006884 559 -AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRP 595 (627)
Q Consensus 559 -~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RP 595 (627)
.+- | +....+..+++.+.++.+|.+|-
T Consensus 277 wpE~-d---------ea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 277 WPEE-D---------EALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred cccc-C---------cCCCHHHHHHHHHHHHhChHhhc
Confidence 010 1 11122344556677789998884
No 435
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.58 E-value=4.9e-15 Score=140.27 Aligned_cols=135 Identities=20% Similarity=0.230 Sum_probs=96.0
Q ss_pred cccCcCCceEEEEEEEcCCcEEEEEEecccccCH---HH----------------------HHHHHHHHHHhccC-Ccee
Q 006884 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATK---RE----------------------FEQQMEVVGTIGKH-SNVV 393 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~----------------------~~~e~~~l~~l~~h-~niv 393 (627)
+.||+|+||.||+|...+++.||||+++...... .. ...|.+.+..+..+ -.+.
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~ 82 (187)
T cd05119 3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPVP 82 (187)
T ss_pred cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCCC
Confidence 5799999999999998889999999886532211 11 13455555555222 1233
Q ss_pred ceeeEEeeCCceeEEEecCCCCcHHH-HhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCeEe
Q 006884 394 PVRAYYYSKDEKLVVYSYMPAGSLFM-LLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS-EGGAKFTHGNIKSSNVLL 471 (627)
Q Consensus 394 ~~~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~Dlkp~NILl 471 (627)
+.+++ ...++||||++++.+.. .+.... .. .....++.+++.++.++|. .+ |+||||||+||++
T Consensus 83 ~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~------~~-~~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~p~Nili 148 (187)
T cd05119 83 KPIDL----NRHVLVMEFIGGDGIPAPRLKDVR------LL-EDPEELYDQILELMRKLYREAG---LVHGDLSEYNILV 148 (187)
T ss_pred ceEec----CCCEEEEEEeCCCCccChhhhhhh------hc-ccHHHHHHHHHHHHHHHhhccC---cCcCCCChhhEEE
Confidence 33332 34589999999965421 111110 11 5577899999999999999 77 9999999999999
Q ss_pred cCCCCeEEeecccccccC
Q 006884 472 TQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 472 ~~~~~~ki~DfG~a~~~~ 489 (627)
+ ++.++++|||.+....
T Consensus 149 ~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 149 D-DGKVYIIDVPQAVEID 165 (187)
T ss_pred E-CCcEEEEECccccccc
Confidence 9 9999999999987554
No 436
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.54 E-value=9.3e-14 Score=136.07 Aligned_cols=136 Identities=18% Similarity=0.206 Sum_probs=104.5
Q ss_pred HhcccC-cCCceEEEEEEEcCCcEEEEEEecccc--------------cCHHHHHHHHHHHHHhccCCce--eceeeEEe
Q 006884 338 SAEVLG-KGSYGSTYKAILEDGTTVVVKRLREVA--------------ATKREFEQQMEVVGTIGKHSNV--VPVRAYYY 400 (627)
Q Consensus 338 ~~~~lg-~G~~g~Vy~~~~~~~~~vavK~~~~~~--------------~~~~~~~~e~~~l~~l~~h~ni--v~~~~~~~ 400 (627)
....|| .||.|+||.+... +..+++|.+.... .....+.+|++++..+ .|+++ +..+++..
T Consensus 35 ~~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L-~~~gi~vP~pl~~~~ 112 (239)
T PRK01723 35 QARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQL-YEAGLPVPRPIAARV 112 (239)
T ss_pred cCceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHH-HhCCCCCceeEeeee
Confidence 356788 8999999999886 6788999874310 1234678899999999 77774 56666644
Q ss_pred eCCc----eeEEEecCCC-CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC
Q 006884 401 SKDE----KLVVYSYMPA-GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL 475 (627)
Q Consensus 401 ~~~~----~~lv~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~ 475 (627)
.... .++|+|++++ .+|.+++... .++.. .+.+++.++.+||+.| |+||||||.|||++.++
T Consensus 113 ~~~~~~~~~~lV~e~l~G~~~L~~~l~~~------~l~~~----~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~~ 179 (239)
T PRK01723 113 VRHGLFYRADILIERIEGARDLVALLQEA------PLSEE----QWQAIGQLIARFHDAG---VYHADLNAHNILLDPDG 179 (239)
T ss_pred eecCcceeeeEEEEecCCCCCHHHHHhcC------CCCHH----HHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCCC
Confidence 3322 2599999997 6898887542 24433 3568899999999999 99999999999999999
Q ss_pred CeEEeeccccccc
Q 006884 476 NGCISDVGLAHLI 488 (627)
Q Consensus 476 ~~ki~DfG~a~~~ 488 (627)
.++|+|||.+...
T Consensus 180 ~v~LIDfg~~~~~ 192 (239)
T PRK01723 180 KFWLIDFDRGELR 192 (239)
T ss_pred CEEEEECCCcccC
Confidence 9999999988654
No 437
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.51 E-value=7.4e-16 Score=134.84 Aligned_cols=136 Identities=32% Similarity=0.495 Sum_probs=120.0
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeecccccccc-Cch-hhc-ccccee
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGV-LPA-FRS-LQLNAL 145 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~-~~~-~~~-~~L~~L 145 (627)
.++..|++.+|++. .+|. .++.|++|+.|+++-|++. .+|..|+.++.|+.|||.+|+++.- .|. |+. ..|+.|
T Consensus 56 ~nlevln~~nnqie-~lp~-~issl~klr~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlral 132 (264)
T KOG0617|consen 56 KNLEVLNLSNNQIE-ELPT-SISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRAL 132 (264)
T ss_pred hhhhhhhcccchhh-hcCh-hhhhchhhhheecchhhhh-cCccccCCCchhhhhhccccccccccCCcchhHHHHHHHH
Confidence 46788999999998 7888 8999999999999999998 9999999999999999999999854 453 544 479999
Q ss_pred ccccccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCCCcCCCCC
Q 006884 146 DLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFP 210 (627)
Q Consensus 146 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~ 210 (627)
+|+.|.|. .+|..++.+++|+.|.+..|.+-. +|.. .+..|++|++.+|+++ .+|..++++.
T Consensus 133 yl~dndfe-~lp~dvg~lt~lqil~lrdndll~-lpkeig~lt~lrelhiqgnrl~-vlppel~~l~ 196 (264)
T KOG0617|consen 133 YLGDNDFE-ILPPDVGKLTNLQILSLRDNDLLS-LPKEIGDLTRLRELHIQGNRLT-VLPPELANLD 196 (264)
T ss_pred HhcCCCcc-cCChhhhhhcceeEEeeccCchhh-CcHHHHHHHHHHHHhcccceee-ecChhhhhhh
Confidence 99999999 899999999999999999999984 5543 8999999999999999 7777766543
No 438
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.48 E-value=7.5e-15 Score=150.86 Aligned_cols=146 Identities=23% Similarity=0.291 Sum_probs=112.7
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc-c-ccceec
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-L-QLNALD 146 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~-~-~L~~L~ 146 (627)
..+..|+|+.|+++ .+..+.+.+|++|+.||||+|.|....+..+.-..+|++|+||+|+|+...+..+. + .|++|+
T Consensus 269 ~kme~l~L~~N~l~-~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~Ln 347 (873)
T KOG4194|consen 269 EKMEHLNLETNRLQ-AVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELN 347 (873)
T ss_pred cccceeecccchhh-hhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhc
Confidence 46889999999998 45555899999999999999999988889999999999999999999988886433 3 678888
Q ss_pred cccccccCCCchhhhccccccccccccccccccCCCC-----CCCccceEeccCCCccccCC-CcCCCCCCCcccC
Q 006884 147 LSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL-----NLPRLKILNFSNNNLNGSIP-DSLQTFPNSSFVG 216 (627)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-----~~~~L~~L~l~~N~l~~~~p-~~~~~~~~l~~~~ 216 (627)
|++|+++..-...|..+++|++|||++|.|+..+.+. ++++|+.|+|.+|+|. .|| ..|..++.|+.++
T Consensus 348 Ls~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk-~I~krAfsgl~~LE~Ld 422 (873)
T KOG4194|consen 348 LSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLK-SIPKRAFSGLEALEHLD 422 (873)
T ss_pred ccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceee-ecchhhhccCcccceec
Confidence 8888877555567777788888888888877766542 6777777777777776 444 4566666665553
No 439
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.47 E-value=3.8e-15 Score=153.84 Aligned_cols=140 Identities=30% Similarity=0.396 Sum_probs=96.5
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeecccccccc----Cc---------
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGV----LP--------- 135 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~----~~--------- 135 (627)
.+...|+|++|+|. +||...|.+|+.|-.||||+|++. .+|+.+.+|..|++|+||+|.+.-. +|
T Consensus 126 Kn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLh 203 (1255)
T KOG0444|consen 126 KNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLH 203 (1255)
T ss_pred cCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhh
Confidence 34666777777776 677767778888888888888887 7777888888888888888865421 11
Q ss_pred -------------hhhc-cccceeccccccccCCCchhhhccccccccccccccccccCCCC-CCCccceEeccCCCccc
Q 006884 136 -------------AFRS-LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL-NLPRLKILNFSNNNLNG 200 (627)
Q Consensus 136 -------------~~~~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~~ 200 (627)
.+-. .+|..+|||.|++. .+|+.+.++.+|+.|+||+|+|+..--.. .+.+|+.|+|+.|+|+
T Consensus 204 ms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQLt- 281 (1255)
T KOG0444|consen 204 MSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQLT- 281 (1255)
T ss_pred cccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCceeeeeccHHHHhhhhhhccccchhc-
Confidence 1111 15788889999988 78888888888888888888887422211 4556666666666665
Q ss_pred cCCCcCCCCCCC
Q 006884 201 SIPDSLQTFPNS 212 (627)
Q Consensus 201 ~~p~~~~~~~~l 212 (627)
.+|+.+.+++.|
T Consensus 282 ~LP~avcKL~kL 293 (1255)
T KOG0444|consen 282 VLPDAVCKLTKL 293 (1255)
T ss_pred cchHHHhhhHHH
Confidence 455544444433
No 440
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.45 E-value=5.5e-13 Score=141.96 Aligned_cols=140 Identities=21% Similarity=0.314 Sum_probs=99.8
Q ss_pred cccCcCCceEEEEEEEcCCcEEEEEEecccccC-----------------------------------------HHHHHH
Q 006884 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAAT-----------------------------------------KREFEQ 378 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------------------------------------~~~~~~ 378 (627)
+.||+|++|.||+|++++|+.||||+.+..... +-+|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 579999999999999999999999997543100 002444
Q ss_pred HHHHHHHhc----cCCceeceeeEEeeCCceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHH-HHHHHHh
Q 006884 379 QMEVVGTIG----KHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR-GIAFIHS 453 (627)
Q Consensus 379 e~~~l~~l~----~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~-~l~~LH~ 453 (627)
|.+.+.++. +++++.-..-+.......++||||++|++|.++...... ..+ +.+++..++. .+..+|.
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~----~~~---~~~ia~~~~~~~l~ql~~ 275 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA----GLD---RKALAENLARSFLNQVLR 275 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc----CCC---HHHHHHHHHHHHHHHHHh
Confidence 555554442 344443323333334567899999999999887653211 122 3456666665 4678898
Q ss_pred cCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006884 454 EGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 454 ~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
.| ++|+|+||.||+++.++.++++|||++..+.
T Consensus 276 ~g---~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 276 DG---FFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred CC---ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 88 9999999999999999999999999987664
No 441
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.43 E-value=1.6e-14 Score=158.47 Aligned_cols=244 Identities=24% Similarity=0.337 Sum_probs=175.7
Q ss_pred cccCcCCceEEEEEEEcC--CcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 340 EVLGKGSYGSTYKAILED--GTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
+.||+|+|+.|-...... ...+|+|.+.... ........|..+-..+.+|+|++.+++.....+..+++.+|..+
T Consensus 26 ~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~g 105 (601)
T KOG0590|consen 26 RSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSDG 105 (601)
T ss_pred ccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccccCcccc
Confidence 458999999998877532 4456666554332 22334444666666675699999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCeeecCCCCCCeEecCCC-CeEEeecccccccCC-C
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH-SEGGAKFTHGNIKSSNVLLTQDL-NGCISDVGLAHLINF-P 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH-~~~~~~ivH~Dlkp~NILl~~~~-~~ki~DfG~a~~~~~-~ 491 (627)
|++.+-+.... ....+-......+.|+..++.|+| ..+ +.|+|+||+|.+++..+ ..+++|||+|..... .
T Consensus 106 ~~~f~~i~~~~---~~~~~~~~~~~~~~ql~s~l~~~H~~~~---~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~ 179 (601)
T KOG0590|consen 106 GSLFSKISHPD---STGTSSSSASRYLPQLNSGLSYLHPENG---VTHRDIKPSNSLLDESGSALKIADFGLATAYRNKN 179 (601)
T ss_pred cccccccccCC---ccCCCCcchhhhhhhhccCccccCcccc---cccCCCCCccchhccCCCcccCCCchhhccccccC
Confidence 99988873111 113455666778999999999999 777 99999999999999999 999999999987654 2
Q ss_pred C------CCCC-CccccCccccCCCC-CCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006884 492 T------TATR-TIGYRAPEVTETRK-ASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 492 ~------~~~~-t~~y~aPE~~~~~~-~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
. ...| ++.|+|||...+.. ..+..|+||.|+++.-+++|..|++.....+.. ...|.... ..+
T Consensus 180 g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~-~~~~~~~~-------~~~- 250 (601)
T KOG0590|consen 180 GAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGR-YSSWKSNK-------GRF- 250 (601)
T ss_pred CcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccccc-ceeecccc-------ccc-
Confidence 2 2346 88999999998854 467899999999999999999998765443311 11111100 000
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 564 VELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
....+. .-.....++..+++..+|..|.+.+++..
T Consensus 251 -~~~~~~---~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 251 -TQLPWN---SISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred -ccCccc---cCChhhhhcccccccCCchhccccccccc
Confidence 000111 11223456667888899999999988865
No 442
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.43 E-value=3.2e-13 Score=130.30 Aligned_cols=202 Identities=21% Similarity=0.298 Sum_probs=140.1
Q ss_pred HHHHhccCCceeceeeEEeeCC-----ceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 006884 382 VVGTIGKHSNVVPVRAYYYSKD-----EKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG 456 (627)
Q Consensus 382 ~l~~l~~h~niv~~~~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ 456 (627)
.+..+ .|.|++++..||.+.. ...+++|||..|++..+|++.+.. +..+......+++.||..||.|||+..
T Consensus 120 nllql-vHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~-~~a~~~~~wkkw~tqIlsal~yLhs~~- 196 (458)
T KOG1266|consen 120 NLLQL-VHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKN-QKALFQKAWKKWCTQILSALSYLHSCD- 196 (458)
T ss_pred HHHHH-HHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHh-hhhhhHHHHHHHHHHHHhhhhhhhccC-
Confidence 33444 7999999999987543 467899999999999999876543 345666777889999999999999976
Q ss_pred CCeeecCCCCCCeEecCCCCeEEeecccccccCC---------CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHH
Q 006884 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF---------PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEM 527 (627)
Q Consensus 457 ~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~---------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el 527 (627)
|+|+|+++..+-|++..++-+||.- +....... .....+-++|.+||+-.....+..+|||+||....||
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~-~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlem 275 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGS-VAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEM 275 (458)
T ss_pred CccccCCcchhheeecCCceEEecc-cCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHH
Confidence 8999999999999999999999842 11111110 1112346789999998888888999999999999999
Q ss_pred HhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006884 528 LTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607 (627)
Q Consensus 528 ~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~ 607 (627)
..+..--.... .......-+.. -++..+ .+. =...+.+|+...|..||+|.+++.+.-.+
T Consensus 276 ailEiq~tnse--S~~~~ee~ia~--------~i~~le--n~l--------qr~~i~kcl~~eP~~rp~ar~llfHpllf 335 (458)
T KOG1266|consen 276 AILEIQSTNSE--SKVEVEENIAN--------VIIGLE--NGL--------QRGSITKCLEGEPNGRPDARLLLFHPLLF 335 (458)
T ss_pred HHheeccCCCc--ceeehhhhhhh--------heeecc--Ccc--------ccCcCcccccCCCCCCcchhhhhcCceee
Confidence 88765321111 00000000000 000000 000 01356799999999999999988764443
No 443
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.42 E-value=6.6e-14 Score=137.97 Aligned_cols=164 Identities=23% Similarity=0.317 Sum_probs=120.1
Q ss_pred eEeeCC---------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeecc-cccc
Q 006884 62 VTCNVN---------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQN-NYFS 131 (627)
Q Consensus 62 v~C~~~---------~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~-N~l~ 131 (627)
|.|+.. +...++|+|..|+|+ .||++.|+.+++|+.|||++|+|+-+-|..|.+|++|..|-+.+ |+|+
T Consensus 51 VdCr~~GL~eVP~~LP~~tveirLdqN~I~-~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~ 129 (498)
T KOG4237|consen 51 VDCRGKGLTEVPANLPPETVEIRLDQNQIS-SIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKIT 129 (498)
T ss_pred EEccCCCcccCcccCCCcceEEEeccCCcc-cCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchh
Confidence 778642 467899999999999 88888999999999999999999988899999988877766655 6665
Q ss_pred ccCchhhc------------------------------------------------------------------------
Q 006884 132 GVLPAFRS------------------------------------------------------------------------ 139 (627)
Q Consensus 132 ~~~~~~~~------------------------------------------------------------------------ 139 (627)
.++...+.
T Consensus 130 ~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wl 209 (498)
T KOG4237|consen 130 DLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWL 209 (498)
T ss_pred hhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchh
Confidence 33221100
Q ss_pred ----------------------------------------------------------------cccceeccccccccCC
Q 006884 140 ----------------------------------------------------------------LQLNALDLSFNAFTGN 155 (627)
Q Consensus 140 ----------------------------------------------------------------~~L~~L~ls~N~l~~~ 155 (627)
.+|+.|+|++|+|+++
T Consensus 210 a~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i 289 (498)
T KOG4237|consen 210 ADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRI 289 (498)
T ss_pred hhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchh
Confidence 1244566666666655
Q ss_pred CchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCCCcCCCCCC---CcccCCCCCCCCCCC
Q 006884 156 IPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPN---SSFVGNSMLCGLPLT 226 (627)
Q Consensus 156 ~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~---l~~~~n~~l~~~~~~ 226 (627)
-+.+|..+..|+.|+|..|+|...-... ++..|+.|+|.+|+|+...|..|..+.. +..++|++.|+|.+.
T Consensus 290 ~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~ 365 (498)
T KOG4237|consen 290 EDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLA 365 (498)
T ss_pred hhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchH
Confidence 5556666666666666666665322222 7889999999999999888988876554 556789999998763
No 444
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.34 E-value=1.7e-13 Score=141.88 Aligned_cols=126 Identities=26% Similarity=0.463 Sum_probs=77.3
Q ss_pred cEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCc-CccccccEEeeccccccccCchhhcc-ccceecc
Q 006884 70 RVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDI-TSISSLQYVYLQNNYFSGVLPAFRSL-QLNALDL 147 (627)
Q Consensus 70 ~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~ls~N~l~~~~~~~~~~-~L~~L~l 147 (627)
.++.|||++|.|. ..|. .+.+-+++-+|+||+|+|. +||..+ -+|+.|-+||||+|++...||....+ .|++|+|
T Consensus 104 dLt~lDLShNqL~-EvP~-~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe~LPPQ~RRL~~LqtL~L 180 (1255)
T KOG0444|consen 104 DLTILDLSHNQLR-EVPT-NLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLEMLPPQIRRLSMLQTLKL 180 (1255)
T ss_pred cceeeecchhhhh-hcch-hhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhhhcCHHHHHHhhhhhhhc
Confidence 4666777777766 5665 5666666777777777776 555543 46667777777777777766655443 4566666
Q ss_pred cccccc-------------------------CCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCcc
Q 006884 148 SFNAFT-------------------------GNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLN 199 (627)
Q Consensus 148 s~N~l~-------------------------~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~ 199 (627)
|+|-+. ..+|.++..|.+|..+|||.|++. .+|.. .+++|+.|+|++|+++
T Consensus 181 s~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it 258 (1255)
T KOG0444|consen 181 SNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT 258 (1255)
T ss_pred CCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee
Confidence 655332 234555556666666666666665 33432 6666666666666665
No 445
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.30 E-value=1.4e-11 Score=114.52 Aligned_cols=131 Identities=15% Similarity=0.091 Sum_probs=95.9
Q ss_pred cccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHHH
Q 006884 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFM 419 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~ 419 (627)
+.++.|.++.||++... +..|++|...........+..|++++..+.+...+.+++.+. ....++||||++|.++..
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~~ 80 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELLT 80 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcccc
Confidence 56899999999999876 778999987654333445788888888884332233444332 334579999999987753
Q ss_pred HhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCeeecCCCCCCeEecCCCCeEEeecccccc
Q 006884 420 LLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEG--GAKFTHGNIKSSNVLLTQDLNGCISDVGLAHL 487 (627)
Q Consensus 420 ~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~--~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~ 487 (627)
. . .....++.+++++|..||+.+ ...++|+|++|.||+++ ++.++++|||.+..
T Consensus 81 ~-~------------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 81 E-D------------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred c-c------------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 2 0 011245678999999999986 12369999999999999 67899999998753
No 446
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.30 E-value=1.8e-12 Score=133.62 Aligned_cols=146 Identities=23% Similarity=0.215 Sum_probs=97.0
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc--cccceec
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNALD 146 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~--~~L~~L~ 146 (627)
..+..|+|++|.|...-+. .|.++++|+.++|..|.++ .+|........|+.|+|.+|.|+.+-..... ..|+.||
T Consensus 78 ~~t~~LdlsnNkl~~id~~-~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslD 155 (873)
T KOG4194|consen 78 SQTQTLDLSNNKLSHIDFE-FFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLD 155 (873)
T ss_pred cceeeeeccccccccCcHH-HHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhh
Confidence 4577789999988865555 7888888888888888888 7886555556688888888887776554322 2567777
Q ss_pred cccccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCCCcCCCCCCCcccC
Q 006884 147 LSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
||.|.|+...-..|..-.+|++|+|++|.|+..-... .+.+|..|.|++|+++...+..|.++++|+.++
T Consensus 156 LSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~Ld 227 (873)
T KOG4194|consen 156 LSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLD 227 (873)
T ss_pred hhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhh
Confidence 7777776333334555566777777777766433221 555666666777776644445566666665554
No 447
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.30 E-value=9.7e-14 Score=136.96 Aligned_cols=139 Identities=22% Similarity=0.377 Sum_probs=79.8
Q ss_pred EEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhcc-ccceecccc
Q 006884 71 VIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSL-QLNALDLSF 149 (627)
Q Consensus 71 v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~-~L~~L~ls~ 149 (627)
+..|+..+|+++ ++|+ .+.++.+|..|++.+|++. .+|+..-+++.|++||...|.+..+||...+. +|.-|+|.+
T Consensus 139 l~dl~~~~N~i~-slp~-~~~~~~~l~~l~~~~n~l~-~l~~~~i~m~~L~~ld~~~N~L~tlP~~lg~l~~L~~LyL~~ 215 (565)
T KOG0472|consen 139 LEDLDATNNQIS-SLPE-DMVNLSKLSKLDLEGNKLK-ALPENHIAMKRLKHLDCNSNLLETLPPELGGLESLELLYLRR 215 (565)
T ss_pred hhhhhccccccc-cCch-HHHHHHHHHHhhccccchh-hCCHHHHHHHHHHhcccchhhhhcCChhhcchhhhHHHHhhh
Confidence 445555666665 5555 5666666666666666666 33333334666666666666666666655554 566666666
Q ss_pred ccccCCCchhhhccccccccccccccccccCCCC---CCCccceEeccCCCccccCCCcCCCCCCCcccC
Q 006884 150 NAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL---NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 150 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~---~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
|+|. .+| .|.+|..|.+|+++.|+|. .+|.. .+++|..|||++|+++ +.|+.+..+.+|.+++
T Consensus 216 Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLD 281 (565)
T KOG0472|consen 216 NKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLD 281 (565)
T ss_pred cccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhc
Confidence 6665 455 5566666666666666655 34432 4555556666666665 5555555555555543
No 448
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.23 E-value=5.5e-10 Score=120.43 Aligned_cols=140 Identities=20% Similarity=0.224 Sum_probs=87.5
Q ss_pred cccCcCCceEEEEEEEcC-CcEEEEEEeccccc---------------------------C--------H------HHHH
Q 006884 340 EVLGKGSYGSTYKAILED-GTTVVVKRLREVAA---------------------------T--------K------REFE 377 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~---------------------------~--------~------~~~~ 377 (627)
+.||+|++|.||+|++++ |+.||||+.+.... . . -++.
T Consensus 125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~ 204 (537)
T PRK04750 125 KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM 204 (537)
T ss_pred hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence 579999999999999987 99999999864310 0 0 1233
Q ss_pred HHHHHHHHhc---cCCceeceeeEE-eeCCceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHH-HHHHHH
Q 006884 378 QQMEVVGTIG---KHSNVVPVRAYY-YSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR-GIAFIH 452 (627)
Q Consensus 378 ~e~~~l~~l~---~h~niv~~~~~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~-~l~~LH 452 (627)
+|+..+.++. .+.+.+.+-..+ .-....++||||++|+.+.++-.-.. ...+.. .++...+. -+.-++
T Consensus 205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~----~g~d~~---~la~~~v~~~~~Qif 277 (537)
T PRK04750 205 REAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRA----AGTDMK---LLAERGVEVFFTQVF 277 (537)
T ss_pred HHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHh----cCCCHH---HHHHHHHHHHHHHHH
Confidence 4444444442 122222222222 22456789999999999977432111 112211 12221111 123344
Q ss_pred hcCCCCeeecCCCCCCeEecCCC----CeEEeecccccccC
Q 006884 453 SEGGAKFTHGNIKSSNVLLTQDL----NGCISDVGLAHLIN 489 (627)
Q Consensus 453 ~~~~~~ivH~Dlkp~NILl~~~~----~~ki~DfG~a~~~~ 489 (627)
..| ++|+|+||.||+++.++ .++++|||+...+.
T Consensus 278 ~~G---ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 278 RDG---FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred hCC---eeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 566 99999999999999988 89999999987653
No 449
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.20 E-value=5.5e-13 Score=131.69 Aligned_cols=142 Identities=27% Similarity=0.416 Sum_probs=120.9
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhcc-ccceecc
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSL-QLNALDL 147 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~-~L~~L~l 147 (627)
..++.|++.+|.++ ++|+ +++.+..++.|+.++|++. .+|++++.+.+|..|+.++|.+...+++++.. .|..|+.
T Consensus 68 ~~l~vl~~~~n~l~-~lp~-aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~el~~~i~~~~~l~dl~~ 144 (565)
T KOG0472|consen 68 ACLTVLNVHDNKLS-QLPA-AIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELKELPDSIGRLLDLEDLDA 144 (565)
T ss_pred cceeEEEeccchhh-hCCH-HHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhccccceeecCchHHHHhhhhhhhc
Confidence 34788888888888 7777 7888888999999999988 88888999999999999999998888887664 7899999
Q ss_pred ccccccCCCchhhhccccccccccccccccccCCCC-CCCccceEeccCCCccccCCCcCCCCCCCccc
Q 006884 148 SFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL-NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV 215 (627)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~ 215 (627)
.+|+++ .+|++++++.+|..|++.+|+++..+|.. +++.|++||...|-++ .+|+.++.+..|..+
T Consensus 145 ~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~L 211 (565)
T KOG0472|consen 145 TNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELL 211 (565)
T ss_pred cccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHH
Confidence 999999 78899999999999999999998766654 7889999999999887 888888888777644
No 450
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.19 E-value=2.2e-11 Score=127.85 Aligned_cols=239 Identities=19% Similarity=0.184 Sum_probs=169.6
Q ss_pred HhcccCc--CCceEEEEEEE---cCCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEE
Q 006884 338 SAEVLGK--GSYGSTYKAIL---EDGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVY 409 (627)
Q Consensus 338 ~~~~lg~--G~~g~Vy~~~~---~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 409 (627)
+.+-+|+ |.+|.||.+.. .++..+|+|+-+... .....-.+|...-..+..|+|.++....+...+..++-+
T Consensus 118 ~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqt 197 (524)
T KOG0601|consen 118 ISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQT 197 (524)
T ss_pred cccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceeee
Confidence 3567899 99999999986 367889999743321 122333556666666778999999889999999999999
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHH----HHHHHHhcCCCCeeecCCCCCCeEecCC-CCeEEeeccc
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTAR----GIAFIHSEGGAKFTHGNIKSSNVLLTQD-LNGCISDVGL 484 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~----~l~~LH~~~~~~ivH~Dlkp~NILl~~~-~~~ki~DfG~ 484 (627)
|++ +.+|..+.+... ..++.........+..+ |+.++|+.. ++|-|+||.||+...+ ...+++|||+
T Consensus 198 E~~-~~sl~~~~~~~~----~~~p~~~l~~~~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~~~~s~~~~df~~ 269 (524)
T KOG0601|consen 198 ELC-GESLQSYCHTPC----NFLPDNLLWNSLRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTSDWTSCKLTDFGL 269 (524)
T ss_pred ccc-cchhHHhhhccc----ccCCchhhhhHHhhhhhcccccccccCCCc---ccccccchhheecccccceeecCCcce
Confidence 988 568888876532 23555566666777777 999999988 9999999999999999 8899999999
Q ss_pred ccccCCCCC---------CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhh
Q 006884 485 AHLINFPTT---------ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVRE 555 (627)
Q Consensus 485 a~~~~~~~~---------~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 555 (627)
...+....- ..+...|++||...+ .++...|+|++|.+..+..++..+...........+..+.
T Consensus 270 v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~------ 342 (524)
T KOG0601|consen 270 VSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY------ 342 (524)
T ss_pred eEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc------
Confidence 877754321 134567999998865 6789999999999999999987665433212111111110
Q ss_pred cccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 556 EWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 556 ~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
. ..+. ...-..++...+..+++.+|..|++.+.+..
T Consensus 343 --i----p~e~-----~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 343 --I----PLEF-----CEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred --C----chhh-----hcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 0 0000 0011122333667889999999999888765
No 451
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.16 E-value=1.4e-11 Score=112.96 Aligned_cols=125 Identities=26% Similarity=0.383 Sum_probs=43.3
Q ss_pred cCCCCcccEEEccCCcCCCCCCCCcC-ccccccEEeeccccccccCchhhccccceeccccccccCCCchhh-hcccccc
Q 006884 90 IGKLDALKILSLRSNYLNGTLPSDIT-SISSLQYVYLQNNYFSGVLPAFRSLQLNALDLSFNAFTGNIPPGF-QNLTRLH 167 (627)
Q Consensus 90 ~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~ls~N~l~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~-~~l~~L~ 167 (627)
+.+..+++.|+|++|.|+ .+. .++ .+.+|+.||||+|.|+.+..-....+|++|++++|+|+. +++.+ ..+++|+
T Consensus 15 ~~n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~~l~~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~L~ 91 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQITKLEGLPGLPRLKTLDLSNNRISS-ISEGLDKNLPNLQ 91 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S--TT----TT--EEE--SS---S--CHHHHHH-TT--
T ss_pred cccccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCccccCccChhhhhhcccCCCCCCc-cccchHHhCCcCC
Confidence 445555677777777776 332 454 466777777777777765432222367777777777773 54444 3578888
Q ss_pred ccccccccccccCCC---CCCCccceEeccCCCccccCCC----cCCCCCCCcccCCC
Q 006884 168 LLNLQNNSISGAIPP---LNLPRLKILNFSNNNLNGSIPD----SLQTFPNSSFVGNS 218 (627)
Q Consensus 168 ~L~l~~N~l~~~~~~---~~~~~L~~L~l~~N~l~~~~p~----~~~~~~~l~~~~n~ 218 (627)
.|+|++|+|...-.- ..+++|+.|+|.+|+++.. +. .+..+|+|+++|..
T Consensus 92 ~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~-~~YR~~vi~~lP~Lk~LD~~ 148 (175)
T PF14580_consen 92 ELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEK-KNYRLFVIYKLPSLKVLDGQ 148 (175)
T ss_dssp EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGS-TTHHHHHHHH-TT-SEETTE
T ss_pred EEECcCCcCCChHHhHHHHcCCCcceeeccCCcccch-hhHHHHHHHHcChhheeCCE
Confidence 888888888642211 1688888888888888733 33 25667888888754
No 452
>PLN03150 hypothetical protein; Provisional
Probab=99.16 E-value=9.3e-11 Score=130.77 Aligned_cols=108 Identities=38% Similarity=0.683 Sum_probs=89.0
Q ss_pred cccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhccccceeccccccccCCCchhhhccccccccccccc
Q 006884 95 ALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNN 174 (627)
Q Consensus 95 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N 174 (627)
.++.|+|++|.++|.+|..++.+++|+.|+|++ |+|+|.+|..++.+++|+.|+|++|
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~----------------------N~l~g~iP~~~~~l~~L~~LdLs~N 476 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSG----------------------NSIRGNIPPSLGSITSLEVLDLSYN 476 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCC----------------------CcccCcCChHHhCCCCCCEEECCCC
Confidence 467788888888888888887777776665555 5555678888999999999999999
Q ss_pred cccccCCCC--CCCccceEeccCCCccccCCCcCCCC----CCCcccCCCCCCCCC
Q 006884 175 SISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTF----PNSSFVGNSMLCGLP 224 (627)
Q Consensus 175 ~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~----~~l~~~~n~~l~~~~ 224 (627)
+|+|.+|.. .+++|+.|+|++|+++|.+|..+... ..+.+.+|+.+|+.|
T Consensus 477 ~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p 532 (623)
T PLN03150 477 SFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP 532 (623)
T ss_pred CCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEecCCccccCCC
Confidence 999999975 89999999999999999999887653 345677899999864
No 453
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.11 E-value=4.4e-11 Score=109.72 Aligned_cols=119 Identities=26% Similarity=0.403 Sum_probs=51.3
Q ss_pred CcEEEEEcCCCCcccccCccccC-CCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhh--cccccee
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIG-KLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFR--SLQLNAL 145 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~--~~~L~~L 145 (627)
.++++|+|++|.|+ .+. .++ .|.+|+.|||++|.|+ .++ .+..+++|++|+|++|+|+.+.+.+. ..+|+.|
T Consensus 19 ~~~~~L~L~~n~I~-~Ie--~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L 93 (175)
T PF14580_consen 19 VKLRELNLRGNQIS-TIE--NLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQEL 93 (175)
T ss_dssp --------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S-CHHHHHH-TT--EE
T ss_pred cccccccccccccc-ccc--chhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCCccccchHHhCCcCCEE
Confidence 46899999999998 454 366 6899999999999999 554 58889999999999999998865543 2489999
Q ss_pred ccccccccCCC-chhhhccccccccccccccccccCCCC------CCCccceEec
Q 006884 146 DLSFNAFTGNI-PPGFQNLTRLHLLNLQNNSISGAIPPL------NLPRLKILNF 193 (627)
Q Consensus 146 ~ls~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~~~~------~~~~L~~L~l 193 (627)
+|++|+|...- =..+..+++|+.|+|.+|.++.. +.- .+|+|+.||-
T Consensus 94 ~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~-~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 94 YLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEK-KNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp E-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGS-TTHHHHHHHH-TT-SEETT
T ss_pred ECcCCcCCChHHhHHHHcCCCcceeeccCCcccch-hhHHHHHHHHcChhheeCC
Confidence 99999998532 13677899999999999999854 431 7899999875
No 454
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.11 E-value=1.2e-09 Score=102.23 Aligned_cols=136 Identities=13% Similarity=0.123 Sum_probs=96.2
Q ss_pred cccCcCCceEEEEEEEcC-------CcEEEEEEecccc-----------------------cCHHHH----HHHHHHHHH
Q 006884 340 EVLGKGSYGSTYKAILED-------GTTVVVKRLREVA-----------------------ATKREF----EQQMEVVGT 385 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~-----------------------~~~~~~----~~e~~~l~~ 385 (627)
..||.|--+.||.|...+ +..+|||+.+... ...+.+ ++|.+.+.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999998543 4789999864210 001223 378888888
Q ss_pred hccC-CceeceeeEEeeCCceeEEEecCCCCcHHH-HhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHH-HhcCCCCeeec
Q 006884 386 IGKH-SNVVPVRAYYYSKDEKLVVYSYMPAGSLFM-LLHRNRSDGGTALDWNSRMKIALGTARGIAFI-HSEGGAKFTHG 462 (627)
Q Consensus 386 l~~h-~niv~~~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~L-H~~~~~~ivH~ 462 (627)
+... -++...+++ ...++||||+.+..+.. .++. ..++......+..+++.+|..| |..+ ++|+
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd------~~~~~~~~~~i~~~i~~~l~~l~H~~g---lVHG 149 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD------AKLNDEEMKNAYYQVLSMMKQLYKECN---LVHA 149 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc------cccCHHHHHHHHHHHHHHHHHHHHhCC---eecC
Confidence 8433 345555543 46679999997654321 2221 1244455677889999999999 7877 9999
Q ss_pred CCCCCCeEecCCCCeEEeecccccccC
Q 006884 463 NIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 463 Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||++.||+++ ++.+.|+|||.+....
T Consensus 150 DLs~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 150 DLSEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred CCCHHHEEEE-CCcEEEEECCCceeCC
Confidence 9999999997 5789999999887654
No 455
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.11 E-value=3.6e-12 Score=131.34 Aligned_cols=140 Identities=24% Similarity=0.351 Sum_probs=73.9
Q ss_pred EEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhccc---------
Q 006884 71 VIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQ--------- 141 (627)
Q Consensus 71 v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~--------- 141 (627)
.+..||+.|++. .+|. .+..+..|+.|.|..|.|. .+|..+.+|..|.+|||+.|+++..++..+.+.
T Consensus 77 t~~aDlsrNR~~-elp~-~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS~lp~~lC~lpLkvli~sNN 153 (722)
T KOG0532|consen 77 TVFADLSRNRFS-ELPE-EACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLSHLPDGLCDLPLKVLIVSNN 153 (722)
T ss_pred hhhhhccccccc-cCch-HHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhhcCChhhhcCcceeEEEecC
Confidence 334455555554 4444 3444444444444444444 444444444444444444444444444433333
Q ss_pred --------------cceeccccccccCCCchhhhccccccccccccccccccCCCCCCCccceEeccCCCccccCCCcCC
Q 006884 142 --------------LNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSIPDSLQ 207 (627)
Q Consensus 142 --------------L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~ 207 (627)
|..||.+.|.+. .+|..++++.+|+.|++..|++...++....-.|..||++.|+++ .||-.|.
T Consensus 154 kl~~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~~lp~El~~LpLi~lDfScNkis-~iPv~fr 231 (722)
T KOG0532|consen 154 KLTSLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLEDLPEELCSLPLIRLDFSCNKIS-YLPVDFR 231 (722)
T ss_pred ccccCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhhhCCHHHhCCceeeeecccCcee-ecchhhh
Confidence 444444444444 344445555555555555555543333333335677888888887 8888888
Q ss_pred CCCCCccc
Q 006884 208 TFPNSSFV 215 (627)
Q Consensus 208 ~~~~l~~~ 215 (627)
+|..|.++
T Consensus 232 ~m~~Lq~l 239 (722)
T KOG0532|consen 232 KMRHLQVL 239 (722)
T ss_pred hhhhheee
Confidence 88887765
No 456
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.10 E-value=8.5e-11 Score=131.11 Aligned_cols=69 Identities=26% Similarity=0.326 Sum_probs=53.7
Q ss_pred ccceeccccccccCCCchhhhccccccccccccccccccCCCCCCCccceEeccCCCccccCCCcCCCCCCCcccC
Q 006884 141 QLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 141 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
+|+.|+|++|+|++ +|.. .++|+.|++++|+|++ +|. .+.+|+.|++++|+|+ .+|..+.+++.|..++
T Consensus 383 ~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~-l~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~Ld 451 (788)
T PRK15387 383 GLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPM-LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVN 451 (788)
T ss_pred ccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCc-chhhhhhhhhccCccc-ccChHHhhccCCCeEE
Confidence 57788888888884 6643 2578899999999985 554 2457889999999998 7898888888877653
No 457
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.10 E-value=7.9e-10 Score=107.46 Aligned_cols=143 Identities=22% Similarity=0.210 Sum_probs=107.9
Q ss_pred cccCcCCceEEEEEEEcCCcEEEEEEeccccc--CHHHHHHHHHHHHHhccC-CceeceeeEEeeCC---ceeEEEecCC
Q 006884 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKH-SNVVPVRAYYYSKD---EKLVVYSYMP 413 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h-~niv~~~~~~~~~~---~~~lv~e~~~ 413 (627)
+.|+.|..+.||++...+|..+++|....... ....+..|++++..+..+ .++.+++.+..... ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 56899999999999987678999998765432 356788999999998432 34566676665532 5689999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEG-------------------------------------- 455 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-------------------------------------- 455 (627)
|.++.+.+.. ..++......++.+++++|.+||+..
T Consensus 84 G~~l~~~~~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 84 GRVLRDRLLR------PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred CEecCCCCCC------CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 9888665421 23666777788888888888888531
Q ss_pred ---------------CCCeeecCCCCCCeEecC--CCCeEEeeccccccc
Q 006884 456 ---------------GAKFTHGNIKSSNVLLTQ--DLNGCISDVGLAHLI 488 (627)
Q Consensus 456 ---------------~~~ivH~Dlkp~NILl~~--~~~~ki~DfG~a~~~ 488 (627)
...++|+|+++.||+++. ++.+.|+||+.+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g 207 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLG 207 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccC
Confidence 134799999999999998 567899999987543
No 458
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.09 E-value=9.7e-11 Score=123.04 Aligned_cols=240 Identities=18% Similarity=0.208 Sum_probs=171.4
Q ss_pred cccCcCCceEEEEEEEc--CCcEEEEEEecccccC---HHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 340 EVLGKGSYGSTYKAILE--DGTTVVVKRLREVAAT---KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
..||.|.|+.|++...+ ++..|++|.+...... +..-..|+.+...+..|.+++.....|......++--||+++
T Consensus 271 ~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~ 350 (524)
T KOG0601|consen 271 SKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEG 350 (524)
T ss_pred EEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhcC
Confidence 67999999999998744 6788999987654322 222345667777777899999988888888888888999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC-CCeEEeecccccccCCC-C
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD-LNGCISDVGLAHLINFP-T 492 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~-~~~ki~DfG~a~~~~~~-~ 492 (627)
+++.....- ...++...++++..|++.++.++|+.. ++|+|+||+||++..+ +..++.|||.+..+... .
T Consensus 351 ~s~~l~~~~-----~~~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~ 422 (524)
T KOG0601|consen 351 GSSSLRSVT-----SQMLDEDPRLRLTAQILTALNVIHSKL---FVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSG 422 (524)
T ss_pred cchhhhhHH-----HHhcCcchhhhhHHHHHhccccccchh---hhcccccccceeeccchhhhhccccccccccceecc
Confidence 988766522 235777888999999999999999988 9999999999999886 88899999998654322 2
Q ss_pred CCCCCcccc--CccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 493 TATRTIGYR--APEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 493 ~~~~t~~y~--aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
......++. +++......+..+.|+||||..+.|.+++..--+.... |. .++.+. .....
T Consensus 423 ~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~--------~~--~i~~~~--------~p~~~ 484 (524)
T KOG0601|consen 423 VFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ--------SL--TIRSGD--------TPNLP 484 (524)
T ss_pred cccccccccccchhhccccccccccccccccccccccccCcccCccccc--------ce--eeeccc--------ccCCC
Confidence 233344455 45555666788999999999999999998753221110 00 001111 11111
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhc
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQ 608 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~ 608 (627)
... ..+..+...+...++..||.+.++..+.+..+
T Consensus 485 ~~~---~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 485 GLK---LQLQVLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred chH---HhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence 112 34445556677899999999999887666544
No 459
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.08 E-value=1.5e-10 Score=129.86 Aligned_cols=118 Identities=25% Similarity=0.457 Sum_probs=57.3
Q ss_pred cEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhccccceecccc
Q 006884 70 RVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQLNALDLSF 149 (627)
Q Consensus 70 ~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~L~~L~ls~ 149 (627)
+.+.|+|++++++ .+|. .+. ++|+.|+|++|+|+ .+|..+. ++|++|+|++|+|++++..+ ..+|+.|+|++
T Consensus 179 ~~~~L~L~~~~Lt-sLP~-~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~LtsLP~~l-~~~L~~L~Ls~ 250 (754)
T PRK15370 179 NKTELRLKILGLT-TIPA-CIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLTSIPATL-PDTIQEMELSI 250 (754)
T ss_pred CceEEEeCCCCcC-cCCc-ccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccccCChhh-hccccEEECcC
Confidence 3455666666555 3444 221 34555566666555 4454442 35555555555555443222 22455555555
Q ss_pred ccccCCCchhhhccccccccccccccccccCCCCCCCccceEeccCCCcc
Q 006884 150 NAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLN 199 (627)
Q Consensus 150 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~ 199 (627)
|+++ .+|..+. ++|+.|+|++|+|+. +|..-.++|+.|++++|+|+
T Consensus 251 N~L~-~LP~~l~--s~L~~L~Ls~N~L~~-LP~~l~~sL~~L~Ls~N~Lt 296 (754)
T PRK15370 251 NRIT-ELPERLP--SALQSLDLFHNKISC-LPENLPEELRYLSVYDNSIR 296 (754)
T ss_pred CccC-cCChhHh--CCCCEEECcCCccCc-cccccCCCCcEEECCCCccc
Confidence 5555 3444432 245555555555542 33322234555555555554
No 460
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.06 E-value=3.1e-10 Score=127.33 Aligned_cols=136 Identities=22% Similarity=0.344 Sum_probs=106.7
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhccccceeccc
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQLNALDLS 148 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~L~~L~ls 148 (627)
..++.|+|++|+|+ .+|.. +. ++|+.|+|++|+|+ .+|..+. .+|+.|+|++|++..++.. ...+|+.|+|+
T Consensus 199 ~~L~~L~Ls~N~Lt-sLP~~-l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~~LP~~-l~s~L~~L~Ls 270 (754)
T PRK15370 199 EQITTLILDNNELK-SLPEN-LQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRITELPER-LPSALQSLDLF 270 (754)
T ss_pred cCCcEEEecCCCCC-cCChh-hc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccCcCChh-HhCCCCEEECc
Confidence 57999999999999 68873 33 58999999999999 6787664 5899999999999966444 34589999999
Q ss_pred cccccCCCchhhhccccccccccccccccccCCCCCCCccceEeccCCCccccCCCc-CCCCCCCcccCC
Q 006884 149 FNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSIPDS-LQTFPNSSFVGN 217 (627)
Q Consensus 149 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~-~~~~~~l~~~~n 217 (627)
+|+|+ .+|..+. ++|+.|+|++|+|++ +|..-.++|+.|++++|.++. +|.. ..++..|...+|
T Consensus 271 ~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp~sL~~L~Ls~N~Lt~-LP~~l~~sL~~L~Ls~N 335 (754)
T PRK15370 271 HNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLPSGITHLNVQSNSLTA-LPETLPPGLKTLEAGEN 335 (754)
T ss_pred CCccC-ccccccC--CCCcEEECCCCcccc-CcccchhhHHHHHhcCCcccc-CCccccccceeccccCC
Confidence 99999 5787665 489999999999995 454334689999999999994 5643 334444444444
No 461
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.04 E-value=5.2e-09 Score=111.22 Aligned_cols=162 Identities=14% Similarity=0.198 Sum_probs=120.9
Q ss_pred EcCCcEEEEEEeccccc-CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHHHHhhhcCCCCCCCCC
Q 006884 355 LEDGTTVVVKRLREVAA-TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALD 433 (627)
Q Consensus 355 ~~~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~ 433 (627)
..++.+|.|...+.... ......+-++.++.+ +||||++++..++..+..|+|+|.+. -|..++.+. .
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtl-RHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l--------~ 102 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTL-RHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKEL--------G 102 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhc-cCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHh--------H
Confidence 44688888888764332 123456667888888 99999999999999999999999864 366666543 2
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCCCC---C-CccccCccccCCC
Q 006884 434 WNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTAT---R-TIGYRAPEVTETR 509 (627)
Q Consensus 434 ~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~~~---~-t~~y~aPE~~~~~ 509 (627)
-....-.+.||+.||.+||..+ .++|++|.-..|+++..|.-||++|-............ . -..|..|+.+...
T Consensus 103 ~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s 180 (690)
T KOG1243|consen 103 KEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPS 180 (690)
T ss_pred HHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCcc
Confidence 3445567889999999999776 59999999999999999999999998775443221111 1 1236666654332
Q ss_pred CCCCcchhHHHHHHHHHHHhCC
Q 006884 510 KASQKSDVYSFGVLLLEMLTGK 531 (627)
Q Consensus 510 ~~~~~~Dv~S~Gvvl~el~tg~ 531 (627)
. ...|.|-||++++|++.|.
T Consensus 181 ~--~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 181 E--WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred c--cchhhhhHHHHHHHHhCcc
Confidence 2 4579999999999999993
No 462
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.03 E-value=5.5e-11 Score=129.17 Aligned_cols=148 Identities=28% Similarity=0.427 Sum_probs=106.5
Q ss_pred CcEEEEEcCCCCcccccCcccc-------------------------CCCCcccEEEccCCcCCCCCCCCcCccccccEE
Q 006884 69 SRVIGIHLPGIGFTGPIPANSI-------------------------GKLDALKILSLRSNYLNGTLPSDITSISSLQYV 123 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~-------------------------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 123 (627)
..+..|+|..|+|. .+|...| ..++.|+.|+|.+|.|+...=+.|.+..+|+.|
T Consensus 310 ~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVL 388 (1081)
T KOG0618|consen 310 KSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVL 388 (1081)
T ss_pred ceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeee
Confidence 35888888888876 4444222 234557788888888877665567888889999
Q ss_pred eeccccccccCchhhc-c-ccceeccccccccCCCchhhhccccccccccccccccccCCCC-CCCccceEeccCCCccc
Q 006884 124 YLQNNYFSGVLPAFRS-L-QLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL-NLPRLKILNFSNNNLNG 200 (627)
Q Consensus 124 ~ls~N~l~~~~~~~~~-~-~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~~ 200 (627)
+|++|+|...+..... + .|+.|+||+|+++ .+|..+.++..|++|...+|+|.. .|.. .++.|+.+|++.|+|+.
T Consensus 389 hLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~~-fPe~~~l~qL~~lDlS~N~L~~ 466 (1081)
T KOG0618|consen 389 HLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLLS-FPELAQLPQLKVLDLSCNNLSE 466 (1081)
T ss_pred eecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCceee-chhhhhcCcceEEecccchhhh
Confidence 9999988887766544 2 6888899999988 788888888888999888888884 4444 88888899998888874
Q ss_pred c-CCCcCC--CCCCCcccCCCC
Q 006884 201 S-IPDSLQ--TFPNSSFVGNSM 219 (627)
Q Consensus 201 ~-~p~~~~--~~~~l~~~~n~~ 219 (627)
. +|.... ++..|.+-||.+
T Consensus 467 ~~l~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 467 VTLPEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred hhhhhhCCCcccceeeccCCcc
Confidence 3 343332 333333445554
No 463
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.03 E-value=6.2e-10 Score=124.30 Aligned_cols=94 Identities=21% Similarity=0.258 Sum_probs=63.1
Q ss_pred cEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhccccceecccc
Q 006884 70 RVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQLNALDLSF 149 (627)
Q Consensus 70 ~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~L~~L~ls~ 149 (627)
+++.|+|.+|+|+ .+|. .+++|+.|+|++|+|+ .+|.. +++|+.|+|++|.|+.+++ ...+|+.|+|++
T Consensus 223 ~L~~L~L~~N~Lt-~LP~----lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~N~L~~Lp~--lp~~L~~L~Ls~ 291 (788)
T PRK15387 223 HITTLVIPDNNLT-SLPA----LPPELRTLEVSGNQLT-SLPVL---PPGLLELSIFSNPLTHLPA--LPSGLCKLWIFG 291 (788)
T ss_pred CCCEEEccCCcCC-CCCC----CCCCCcEEEecCCccC-cccCc---ccccceeeccCCchhhhhh--chhhcCEEECcC
Confidence 5677777777777 4554 2467777777777777 45542 3567777777777776543 113577788888
Q ss_pred ccccCCCchhhhccccccccccccccccc
Q 006884 150 NAFTGNIPPGFQNLTRLHLLNLQNNSISG 178 (627)
Q Consensus 150 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 178 (627)
|+|+ .+|.. +++|+.|+|++|+|++
T Consensus 292 N~Lt-~LP~~---p~~L~~LdLS~N~L~~ 316 (788)
T PRK15387 292 NQLT-SLPVL---PPGLQELSVSDNQLAS 316 (788)
T ss_pred Cccc-ccccc---ccccceeECCCCcccc
Confidence 8887 45542 3578888888888876
No 464
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.00 E-value=5e-11 Score=129.49 Aligned_cols=127 Identities=24% Similarity=0.380 Sum_probs=110.3
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCC-CcCccccccEEeeccccccccCchhhcc-cccee
Q 006884 68 RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPS-DITSISSLQYVYLQNNYFSGVLPAFRSL-QLNAL 145 (627)
Q Consensus 68 ~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~ls~N~l~~~~~~~~~~-~L~~L 145 (627)
...+..|.|.+|.|+...-+ .|.++++|+.|+|++|+|. .+|. .+.++..|++|+||+|+|+.++...... .|++|
T Consensus 358 ~~~Lq~LylanN~Ltd~c~p-~l~~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~~Lp~tva~~~~L~tL 435 (1081)
T KOG0618|consen 358 HAALQELYLANNHLTDSCFP-VLVNFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLTTLPDTVANLGRLHTL 435 (1081)
T ss_pred hHHHHHHHHhcCcccccchh-hhccccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhhhhhHHHHhhhhhHHH
Confidence 35688999999999988766 7999999999999999998 7776 5678999999999999999988655554 79999
Q ss_pred ccccccccCCCchhhhccccccccccccccccccC-CCC-CCCccceEeccCCCc
Q 006884 146 DLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAI-PPL-NLPRLKILNFSNNNL 198 (627)
Q Consensus 146 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~-~~~~L~~L~l~~N~l 198 (627)
...+|++. ..| .+..+++|+.+|+|.|+|+... |.. ..++|++|||++|.-
T Consensus 436 ~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 436 RAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred hhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcc
Confidence 99999999 788 8999999999999999998633 433 458999999999984
No 465
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.00 E-value=8.4e-09 Score=93.23 Aligned_cols=131 Identities=20% Similarity=0.323 Sum_probs=98.8
Q ss_pred cccCcCCceEEEEEEEcCCcEEEEEE-eccccc--------CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 340 EVLGKGSYGSTYKAILEDGTTVVVKR-LREVAA--------TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~-~~~~~~--------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
..+++|+-+.+|.+.+. |..+++|. +.+... ....-.+|+.++..+ +--.|....-+..+.+...++||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a-~~~GV~~P~v~dvD~~~~~I~me 79 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKA-REAGVPVPIVYDVDPDNGLIVME 79 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHH-HHcCCCCCeEEEEcCCCCEEEEE
Confidence 35789999999999876 44566664 222211 123456788888887 54566656666777888889999
Q ss_pred cCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
|++|-.|.+.+... ...++..+-.-+.-||..+ |+|+||.++||++..+. +.++|||++...
T Consensus 80 ~I~G~~lkd~l~~~------------~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 80 YIEGELLKDALEEA------------RPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred EeCChhHHHHHHhc------------chHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCCc-EEEEECCccccc
Confidence 99999998888753 2456667777788899999 99999999999998765 899999998754
No 466
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.98 E-value=6.2e-11 Score=113.09 Aligned_cols=105 Identities=25% Similarity=0.275 Sum_probs=45.0
Q ss_pred CCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhccccceeccccccccCCCchhhhcccccccccc
Q 006884 92 KLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQLNALDLSFNAFTGNIPPGFQNLTRLHLLNL 171 (627)
Q Consensus 92 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 171 (627)
.-..|+.||||+|.|+ .+..+..-+++++.|++|+|.+..+-.-....+|+.||||+|.++ .+..+-..|.++++|.|
T Consensus 282 TWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~L 359 (490)
T KOG1259|consen 282 TWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTVQNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKL 359 (490)
T ss_pred hHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeeehhhhhcccceEeecccchhH-hhhhhHhhhcCEeeeeh
Confidence 3344444444444444 344444444444444444444443322111124444455544444 23233333444444444
Q ss_pred ccccccccCCCC-CCCccceEeccCCCcc
Q 006884 172 QNNSISGAIPPL-NLPRLKILNFSNNNLN 199 (627)
Q Consensus 172 ~~N~l~~~~~~~-~~~~L~~L~l~~N~l~ 199 (627)
+.|.|.. +... .+-+|.+||+++|++.
T Consensus 360 a~N~iE~-LSGL~KLYSLvnLDl~~N~Ie 387 (490)
T KOG1259|consen 360 AQNKIET-LSGLRKLYSLVNLDLSSNQIE 387 (490)
T ss_pred hhhhHhh-hhhhHhhhhheeccccccchh
Confidence 4444442 2221 3444444455555443
No 467
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.95 E-value=7.8e-09 Score=92.86 Aligned_cols=141 Identities=16% Similarity=0.285 Sum_probs=103.7
Q ss_pred cccCcCCceEEEEEEEcCCcEEEEEE-ecc----c----ccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 340 EVLGKGSYGSTYKAILEDGTTVVVKR-LRE----V----AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~-~~~----~----~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
+++-+|+-+.|+++.+. |+...||. +.+ . .-..+.-.+|++.+.++ +.-.|.-..-++.+...-.++||
T Consensus 13 ~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~-~~~GI~~P~l~~~D~~~~~i~ME 90 (229)
T KOG3087|consen 13 ELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKC-RALGIPAPRLIFIDTYGGQIYME 90 (229)
T ss_pred eeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHH-HHhCCCCceEEEEecCCCeEEEE
Confidence 56889999999999986 67777774 221 1 12356678889988887 44456555556677777789999
Q ss_pred cCCC-CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC---eEEeeccccc
Q 006884 411 YMPA-GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN---GCISDVGLAH 486 (627)
Q Consensus 411 ~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~---~ki~DfG~a~ 486 (627)
|++| -++.+++...-.. ...-.....++..+-+.+.-||..+ |+|+||..+||++..++. +.++|||++.
T Consensus 91 ~~~g~~~vk~~i~~~~~~---~~~d~~~~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 91 FIDGASTVKDFILSTMED---ESEDEGLAELARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred eccchhHHHHHHHHHccC---cccchhHHHHHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEeecchh
Confidence 9977 4788888765321 1222233678888889999999998 999999999999976543 4799999986
Q ss_pred cc
Q 006884 487 LI 488 (627)
Q Consensus 487 ~~ 488 (627)
..
T Consensus 165 ~s 166 (229)
T KOG3087|consen 165 VS 166 (229)
T ss_pred cc
Confidence 44
No 468
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=98.89 E-value=3.5e-11 Score=124.12 Aligned_cols=138 Identities=26% Similarity=0.393 Sum_probs=110.8
Q ss_pred EEEcCCCCcccccCcccc-CCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhcc-ccceeccccc
Q 006884 73 GIHLPGIGFTGPIPANSI-GKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSL-QLNALDLSFN 150 (627)
Q Consensus 73 ~L~l~~~~l~~~~~~~~~-~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~-~L~~L~ls~N 150 (627)
.|.|++..+. .+|.+.. -.|..-...||+.|++. .+|..+..+..|+.|.|+.|.+..+++....+ .|++|||+.|
T Consensus 54 ~l~Ls~rrlk-~fpr~a~~~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r~ip~~i~~L~~lt~l~ls~N 131 (722)
T KOG0532|consen 54 RLLLSGRRLK-EFPRGAASYDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIRTIPEAICNLEALTFLDLSSN 131 (722)
T ss_pred ccccccchhh-cCCCccccccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccceecchhhhhhhHHHHhhhccc
Confidence 3455555555 3443222 34666788999999999 99999999999999999999999999887776 6999999999
Q ss_pred cccCCCchhhhccccccccccccccccccCCCC-CCCccceEeccCCCccccCCCcCCCCCCCccc
Q 006884 151 AFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL-NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV 215 (627)
Q Consensus 151 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~ 215 (627)
+++ .+|..++.|+ |+.|-+++|+++..+++. .+..|..||.+.|.+. .+|..++.+..|.-+
T Consensus 132 qlS-~lp~~lC~lp-Lkvli~sNNkl~~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l 194 (722)
T KOG0532|consen 132 QLS-HLPDGLCDLP-LKVLIVSNNKLTSLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDL 194 (722)
T ss_pred hhh-cCChhhhcCc-ceeEEEecCccccCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHH
Confidence 999 7898888885 899999999998555444 6788889999999987 777777777666544
No 469
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.87 E-value=2.5e-10 Score=109.03 Aligned_cols=126 Identities=26% Similarity=0.378 Sum_probs=100.2
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhcc-ccceecc
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSL-QLNALDL 147 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~-~L~~L~l 147 (627)
..+++|||++|.++ .+-. +..-+|.++.|+||+|.|. .+- .+..|++|+.||||+|.++...---..+ +++.|.|
T Consensus 284 q~LtelDLS~N~I~-~iDE-SvKL~Pkir~L~lS~N~i~-~v~-nLa~L~~L~~LDLS~N~Ls~~~Gwh~KLGNIKtL~L 359 (490)
T KOG1259|consen 284 QELTELDLSGNLIT-QIDE-SVKLAPKLRRLILSQNRIR-TVQ-NLAELPQLQLLDLSGNLLAECVGWHLKLGNIKTLKL 359 (490)
T ss_pred hhhhhccccccchh-hhhh-hhhhccceeEEecccccee-eeh-hhhhcccceEeecccchhHhhhhhHhhhcCEeeeeh
Confidence 34889999999988 5555 6788999999999999998 444 4888999999999999998765432222 7899999
Q ss_pred ccccccCCCchhhhccccccccccccccccccCC--CC-CCCccceEeccCCCccc
Q 006884 148 SFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIP--PL-NLPRLKILNFSNNNLNG 200 (627)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~-~~~~L~~L~l~~N~l~~ 200 (627)
+.|.|.. + +.+..|-+|..||+++|+|...-. .. ++|-|+.|.|.+|++.+
T Consensus 360 a~N~iE~-L-SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 360 AQNKIET-L-SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred hhhhHhh-h-hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 9999873 3 467888899999999999975322 22 78889999999999984
No 470
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.86 E-value=6.1e-08 Score=96.07 Aligned_cols=140 Identities=16% Similarity=0.114 Sum_probs=98.5
Q ss_pred cccCcCCceEEEEEEEcCCcEEEEEEeccccc------------CHHHHHHHHHHHHHhccCCce--eceeeEEee----
Q 006884 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAA------------TKREFEQQMEVVGTIGKHSNV--VPVRAYYYS---- 401 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------~~~~~~~e~~~l~~l~~h~ni--v~~~~~~~~---- 401 (627)
+.+-+-....|++..+ +|+.|.||+...... ....+.+|...+.++. ..+| ...+++...
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~-~~GIptP~pVa~~e~~~~~ 105 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLH-EVGVDTMTGVAFGERGSNP 105 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHH-HcCCCCCCeeEEEEecCCC
Confidence 4444444555777766 478899997643221 1124778888887773 2232 334555543
Q ss_pred -CCceeEEEecCCCC-cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC------
Q 006884 402 -KDEKLVVYSYMPAG-SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ------ 473 (627)
Q Consensus 402 -~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~------ 473 (627)
....++|+|++++. +|.+++.... ....+...+..++.+++..+.-||..| |+|+|+++.|||++.
T Consensus 106 ~~~~s~LVte~l~~~~sL~~~~~~~~---~~~~~~~~~~~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~~~~~~~ 179 (268)
T PRK15123 106 ATRTSFIITEDLAPTISLEDYCADWA---TNPPDPRLKRMLIKRVATMVRDMHAAG---INHRDCYICHFLLHLPFPGRE 179 (268)
T ss_pred ccceeEEEEeeCCCCccHHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHHCc---CccCCCChhhEEEeccccCCC
Confidence 23468999999886 8988885321 123455677789999999999999999 999999999999975
Q ss_pred -CCCeEEeecccccc
Q 006884 474 -DLNGCISDVGLAHL 487 (627)
Q Consensus 474 -~~~~ki~DfG~a~~ 487 (627)
+..+.++||+.++.
T Consensus 180 ~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 180 EDLKLSVIDLHRAQI 194 (268)
T ss_pred CCceEEEEECCcccc
Confidence 46789999998754
No 471
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=98.84 E-value=9.9e-09 Score=122.92 Aligned_cols=141 Identities=20% Similarity=0.232 Sum_probs=96.9
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc-cccceecc
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALDL 147 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~-~~L~~L~l 147 (627)
..++.|++.++.+. .+|. .| .+.+|+.|+|++|++. .+|..+..+++|++|+|++|...+.+|.+.. .+|+.|+|
T Consensus 589 ~~Lr~L~~~~~~l~-~lP~-~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~ls~l~~Le~L~L 664 (1153)
T PLN03210 589 PKLRLLRWDKYPLR-CMPS-NF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPDLSMATNLETLKL 664 (1153)
T ss_pred cccEEEEecCCCCC-CCCC-cC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCccccCCcccEEEe
Confidence 34666777666665 5665 34 4677888888888877 6777777888888888887765555565443 37888888
Q ss_pred ccccccCCCchhhhccccccccccccccccccCCCC-CCCccceEeccCCCccccCCCcCCCCCCCc
Q 006884 148 SFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL-NLPRLKILNFSNNNLNGSIPDSLQTFPNSS 213 (627)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~ 213 (627)
++|.....+|..+.++++|+.|++++|..-+.+|.. ++++|+.|++++|...+.+|....++..|.
T Consensus 665 ~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i~l~sL~~L~Lsgc~~L~~~p~~~~nL~~L~ 731 (1153)
T PLN03210 665 SDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDISTNISWLD 731 (1153)
T ss_pred cCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcCCCCCCCEEeCCCCCCccccccccCCcCeee
Confidence 877655577888888888888888876544455543 677788888877766556665544444443
No 472
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=98.81 E-value=1.3e-08 Score=122.00 Aligned_cols=65 Identities=25% Similarity=0.307 Sum_probs=33.8
Q ss_pred ccceEeeCCCCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccc
Q 006884 59 WIGVTCNVNRSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNN 128 (627)
Q Consensus 59 w~gv~C~~~~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 128 (627)
|.|+.+ -.+++.|+|++++..+.+|. +..+++|+.|+|++|.....+|..++.+++|+.|+|++|
T Consensus 627 ~~~~~~---l~~Lk~L~Ls~~~~l~~ip~--ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c 691 (1153)
T PLN03210 627 WDGVHS---LTGLRNIDLRGSKNLKEIPD--LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRC 691 (1153)
T ss_pred cccccc---CCCCCEEECCCCCCcCcCCc--cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCC
Confidence 555533 24566666665544444443 555555555555555433455555555555555555543
No 473
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.80 E-value=3.4e-09 Score=79.91 Aligned_cols=60 Identities=28% Similarity=0.488 Sum_probs=46.2
Q ss_pred cEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccc
Q 006884 70 RVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYF 130 (627)
Q Consensus 70 ~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l 130 (627)
+++.|+|++|+++ .+|++.|.++++|+.|+|++|.|+...|..|.++++|++|+|++|+|
T Consensus 2 ~L~~L~l~~n~l~-~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLT-EIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTES-EECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCC-ccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 5777888888777 56666778888888888888888766667778888888888888765
No 474
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.79 E-value=3.9e-09 Score=112.29 Aligned_cols=143 Identities=34% Similarity=0.487 Sum_probs=96.6
Q ss_pred CcEEEEEcCCCCcccccCccccCCCC-cccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchh-hccccceec
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLD-ALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAF-RSLQLNALD 146 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~-~~~~L~~L~ 146 (627)
..++.|++.+|+++ .+|+ ....++ +|+.|++++|.+. .+|..+..+++|+.|++++|+++.+++.. ....|+.|+
T Consensus 116 ~~l~~L~l~~n~i~-~i~~-~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~~~L~~L~ 192 (394)
T COG4886 116 TNLTSLDLDNNNIT-DIPP-LIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLSDLPKLLSNLSNLNNLD 192 (394)
T ss_pred cceeEEecCCcccc-cCcc-ccccchhhcccccccccchh-hhhhhhhccccccccccCCchhhhhhhhhhhhhhhhhee
Confidence 35777777777777 5655 456664 7888888888877 66667777888888888888887777765 445777788
Q ss_pred cccccccCCCchhhhccccccccccccccccccCCCC-CCCccceEeccCCCccccCCCcCCCCCCCcccC
Q 006884 147 LSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL-NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
+++|+++ .+|.....+..|++|++++|++...+... .+.++..|.+.+|++. .++..++.++.++.++
T Consensus 193 ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~ 261 (394)
T COG4886 193 LSGNKIS-DLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLD 261 (394)
T ss_pred ccCCccc-cCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCCceee-eccchhccccccceec
Confidence 8888877 56666556666777777777543333322 6666666777777765 3355555555555554
No 475
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.79 E-value=4.8e-08 Score=91.26 Aligned_cols=126 Identities=21% Similarity=0.264 Sum_probs=80.2
Q ss_pred EEEEEEEcCCcEEEEEEecccc-----------------------c----CHHHHHHHHHHHHHhccC-CceeceeeEEe
Q 006884 349 STYKAILEDGTTVVVKRLREVA-----------------------A----TKREFEQQMEVVGTIGKH-SNVVPVRAYYY 400 (627)
Q Consensus 349 ~Vy~~~~~~~~~vavK~~~~~~-----------------------~----~~~~~~~e~~~l~~l~~h-~niv~~~~~~~ 400 (627)
.||.|...+|..+|+|..+... . ......+|.+.|.++... -++...+.+
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~-- 78 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY-- 78 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence 4899999889999999863210 0 123467788999988433 245555544
Q ss_pred eCCceeEEEecCC--CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHH-HHhcCCCCeeecCCCCCCeEecCCCCe
Q 006884 401 SKDEKLVVYSYMP--AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAF-IHSEGGAKFTHGNIKSSNVLLTQDLNG 477 (627)
Q Consensus 401 ~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~-LH~~~~~~ivH~Dlkp~NILl~~~~~~ 477 (627)
....+||||++ |..+..+.... ++......++.+++..+.. +|..| |+|+|+.+.||+++++ .+
T Consensus 79 --~~~~ivME~I~~~G~~~~~l~~~~-------~~~~~~~~~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv~~~-~~ 145 (188)
T PF01163_consen 79 --NRNVIVMEYIGEDGVPLPRLKDVD-------LSPEEPKELLEEILEEIIKMLHKAG---IVHGDLSEYNILVDDG-KV 145 (188)
T ss_dssp --ETTEEEEE--EETTEEGGCHHHCG-------GGGSTHHHHHHHHHHHHHHHHHCTT---EEESS-STTSEEEETT-CE
T ss_pred --eCCEEEEEecCCCccchhhHHhcc-------ccchhHHHHHHHHHHHHHHHHHhcC---ceecCCChhhEEeecc-eE
Confidence 24569999998 54444333211 1123445677777775555 56877 9999999999999987 99
Q ss_pred EEeecccccccC
Q 006884 478 CISDVGLAHLIN 489 (627)
Q Consensus 478 ki~DfG~a~~~~ 489 (627)
.|+|||.+....
T Consensus 146 ~iIDf~qav~~~ 157 (188)
T PF01163_consen 146 YIIDFGQAVDSS 157 (188)
T ss_dssp EE--GTTEEETT
T ss_pred EEEecCcceecC
Confidence 999999886654
No 476
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.76 E-value=2.2e-07 Score=93.48 Aligned_cols=262 Identities=13% Similarity=0.173 Sum_probs=152.2
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeE----Ee--eC-CceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAY----YY--SK-DEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~----~~--~~-~~~~lv~e~ 411 (627)
...||+|+.+.+|..-.- ...+.|+........+ .+.++.+.....||-+..-+.+ .. +. ....++|..
T Consensus 16 gr~LgqGgea~ly~l~e~--~d~VAKIYh~Pppa~~--aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflmP~ 91 (637)
T COG4248 16 GRPLGQGGEADLYTLGEV--RDQVAKIYHAPPPAAQ--AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLMPK 91 (637)
T ss_pred CccccCCccceeeecchh--hchhheeecCCCchHH--HHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEeccc
Confidence 356999999999975422 2235566654322211 2223444444466644321111 11 11 124466666
Q ss_pred CCCCc-HHHHhh-hcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006884 412 MPAGS-LFMLLH-RNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 412 ~~~gs-L~~~l~-~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
+++.. +..++. ..+.++-....|.-.++.+..+|.+.+.||.+| .+-+|+.++|+|+.+++.+.+.|=..-....
T Consensus 92 v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~ 168 (637)
T COG4248 92 VSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG---HVVGDVNQNSFLVSDDSKVVLVDSDSFQINA 168 (637)
T ss_pred CCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC---CcccccCccceeeecCceEEEEcccceeecc
Confidence 65532 222222 123333456899999999999999999999999 8889999999999999999998754322222
Q ss_pred CCC---CCCCCccccCccccC-----CCCCCCcchhHHHHHHHHHHHhC-CCCCCCCCCCCC-C-CHHHHHHHH-h---h
Q 006884 490 FPT---TATRTIGYRAPEVTE-----TRKASQKSDVYSFGVLLLEMLTG-KAPLQHSGHDDV-V-DLPRWVRSV-V---R 554 (627)
Q Consensus 490 ~~~---~~~~t~~y~aPE~~~-----~~~~~~~~Dv~S~Gvvl~el~tg-~~pf~~~~~~~~-~-~~~~~~~~~-~---~ 554 (627)
... ..+|...|.+||... +-.-+...|-|.+||++++++.| +.||.+...... . ....-+..- + .
T Consensus 169 ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~ 248 (637)
T COG4248 169 NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYAS 248 (637)
T ss_pred CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeech
Confidence 111 234677899999764 33457789999999999999886 899986422110 0 000000000 0 0
Q ss_pred hcccccccchhhhcCCChHHHHHHHHHHHHHcccCC--CCCCCCHHHHHHHHHhhccc
Q 006884 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKV--PDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 555 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~--P~~RPs~~ev~~~L~~~~~~ 610 (627)
+......-.+.-......+. .+.-+..+|+... +.-|||++-.+..|..+.+.
T Consensus 249 ~~~~g~~p~P~~~P~~~Lpp---~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~ 303 (637)
T COG4248 249 DQRRGLKPPPRSIPLSMLPP---DVQALFQQAFTESGVATPRPTAKAWVAALDALRQQ 303 (637)
T ss_pred hccCCCCCCCCCCChhhcCH---HHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHh
Confidence 00000000000001111222 3334445777664 56899999999888887654
No 477
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.72 E-value=5.6e-09 Score=111.04 Aligned_cols=141 Identities=29% Similarity=0.388 Sum_probs=118.7
Q ss_pred cEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc-cccceeccc
Q 006884 70 RVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALDLS 148 (627)
Q Consensus 70 ~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~-~~L~~L~ls 148 (627)
+++.|++++|.+. .+|. .+..+++|+.|++++|+++ .+|...+.+++|+.|++++|++..+++.... ..|++|+++
T Consensus 141 nL~~L~l~~N~i~-~l~~-~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~~l~~~~~~~~~L~~l~~~ 217 (394)
T COG4886 141 NLKELDLSDNKIE-SLPS-PLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKISDLPPEIELLSALEELDLS 217 (394)
T ss_pred hcccccccccchh-hhhh-hhhccccccccccCCchhh-hhhhhhhhhhhhhheeccCCccccCchhhhhhhhhhhhhhc
Confidence 7999999999998 6664 6899999999999999999 7887777999999999999999999887544 469999999
Q ss_pred cccccCCCchhhhccccccccccccccccccCC-CCCCCccceEeccCCCccccCCCcCCCCCCCcccC
Q 006884 149 FNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIP-PLNLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 149 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
+|.+. ..+..+..+.++..|.+.+|++...+. ...+++|++|++++|.++ .++. ++.+..+..++
T Consensus 218 ~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~l~~l~~L~~s~n~i~-~i~~-~~~~~~l~~L~ 283 (394)
T COG4886 218 NNSII-ELLSSLSNLKNLSGLELSNNKLEDLPESIGNLSNLETLDLSNNQIS-SISS-LGSLTNLRELD 283 (394)
T ss_pred CCcce-ecchhhhhcccccccccCCceeeeccchhccccccceecccccccc-cccc-ccccCccCEEe
Confidence 99655 477889999999999999999985322 237888999999999998 5554 66666666665
No 478
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.71 E-value=5e-07 Score=93.38 Aligned_cols=169 Identities=26% Similarity=0.366 Sum_probs=126.1
Q ss_pred ceEEEEEEEc-CCcEEEEEEeccccc-CHHHHHHHHHHHHHhccCCceeceeeEEee----CCceeEEEecCCC-CcHHH
Q 006884 347 YGSTYKAILE-DGTTVVVKRLREVAA-TKREFEQQMEVVGTIGKHSNVVPVRAYYYS----KDEKLVVYSYMPA-GSLFM 419 (627)
Q Consensus 347 ~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~~~~~~~~----~~~~~lv~e~~~~-gsL~~ 419 (627)
-.+.||+... ||..|+.|++...+. .......-+++++++ .|.|+|++...+.. +...++||+|.++ ++|.+
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl-~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKL-CHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHh-ccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 3578999854 899999999943322 122234557788888 99999999888763 3467899999887 56766
Q ss_pred HhhhcCC----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006884 420 LLHRNRS----------DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 420 ~l~~~~~----------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
+...+.. ..+...++...+.++.|+..||.++|+.| +.-+-|.+.+|+++.+..++|+..|....+.
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccceeeec
Confidence 5543221 12344677889999999999999999999 8779999999999999999999888876665
Q ss_pred CCCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCC
Q 006884 490 FPTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKA 532 (627)
Q Consensus 490 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~ 532 (627)
...+ |.+. --.+-|.=.||.+++.|.||..
T Consensus 445 ~d~~----------~~le---~~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 445 EDPT----------EPLE---SQQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred CCCC----------cchh---HHhhhhHHHHHHHHHHHhhccc
Confidence 4331 1111 1245788899999999999964
No 479
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.70 E-value=1e-08 Score=113.57 Aligned_cols=190 Identities=22% Similarity=0.256 Sum_probs=132.9
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
+-+-+|.++.++.+.-. .|...++|...... ...+....+-.+.... ++|-++....-+......+++++|..+
T Consensus 810 ~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p-~~P~v~~~~~s~~~rsP~~L~~~~~~~ 888 (1205)
T KOG0606|consen 810 KPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITP-RSPAVVRSFPSFPCRSPLPLVGHYLNG 888 (1205)
T ss_pred ccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccC-CCCceecccCCCCCCCCcchhhHHhcc
Confidence 46788999999887643 23333444332211 0112222222222222 456666555445556778999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC-----
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN----- 489 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~----- 489 (627)
++|...++... ..+..........+.++++|||... +.|+|++|.|++...++..++.|||......
T Consensus 889 ~~~~Skl~~~~-----~~saepaRs~i~~~vqs~e~L~s~~---r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~ 960 (1205)
T KOG0606|consen 889 GDLPSKLHNSG-----CLSAEPARSPILERVQSLESLHSSL---RKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPT 960 (1205)
T ss_pred CCchhhhhcCC-----CcccccccchhHHHHhhhhccccch---hhcccccccchhhcccCCcccCccccccccccccCc
Confidence 99999988653 2444444455566778899999876 8999999999999999999999998432210
Q ss_pred --------------------C----------CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 006884 490 --------------------F----------PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSG 538 (627)
Q Consensus 490 --------------------~----------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~ 538 (627)
. .....+|+.|.+||...+......+|+|+.|++++|.++|..||....
T Consensus 961 ~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~t 1039 (1205)
T KOG0606|consen 961 TDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAET 1039 (1205)
T ss_pred CCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcc
Confidence 0 011235888999999999999999999999999999999999998644
No 480
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=98.70 E-value=2.1e-09 Score=110.72 Aligned_cols=131 Identities=22% Similarity=0.301 Sum_probs=70.3
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCc---ccEEEccCCcCCC----CCCCCcCcc-ccccEEeeccccccccCch----
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDA---LKILSLRSNYLNG----TLPSDITSI-SSLQYVYLQNNYFSGVLPA---- 136 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~---L~~L~L~~N~l~~----~~p~~~~~l-~~L~~L~ls~N~l~~~~~~---- 136 (627)
.+++.|+|++|.+.+..+. .+..+.+ |+.|+|++|.+++ .+...+..+ ++|++|+|++|.+++....
T Consensus 81 ~~L~~L~l~~~~~~~~~~~-~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~ 159 (319)
T cd00116 81 CGLQELDLSDNALGPDGCG-VLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAK 159 (319)
T ss_pred CceeEEEccCCCCChhHHH-HHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHH
Confidence 4666666666666543333 3444433 6666666666652 122233444 6666666666666642211
Q ss_pred hhc--cccceeccccccccCC----CchhhhccccccccccccccccccCCC------CCCCccceEeccCCCccc
Q 006884 137 FRS--LQLNALDLSFNAFTGN----IPPGFQNLTRLHLLNLQNNSISGAIPP------LNLPRLKILNFSNNNLNG 200 (627)
Q Consensus 137 ~~~--~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~~~------~~~~~L~~L~l~~N~l~~ 200 (627)
.+. .+|+.|+|++|.+++. ++..+..+++|+.|+|++|.+++.... ..+++|+.|++++|.+++
T Consensus 160 ~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~ 235 (319)
T cd00116 160 ALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTD 235 (319)
T ss_pred HHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCch
Confidence 111 2566666666666632 223344445666666666666532211 145666666666666653
No 481
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=98.68 E-value=2e-09 Score=110.95 Aligned_cols=147 Identities=22% Similarity=0.212 Sum_probs=104.9
Q ss_pred CcEEEEEcCCCCccc------ccCccccCCCCcccEEEccCCcCCCCCCCCcCcccc---ccEEeeccccccccCch---
Q 006884 69 SRVIGIHLPGIGFTG------PIPANSIGKLDALKILSLRSNYLNGTLPSDITSISS---LQYVYLQNNYFSGVLPA--- 136 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~------~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~ls~N~l~~~~~~--- 136 (627)
..++.|+++++.+.+ .++. .+..+++|+.|+|++|.+.+..+..+..+.+ |++|++++|++++....
T Consensus 51 ~~l~~l~l~~~~~~~~~~~~~~~~~-~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~ 129 (319)
T cd00116 51 PSLKELCLSLNETGRIPRGLQSLLQ-GLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLA 129 (319)
T ss_pred CCceEEeccccccCCcchHHHHHHH-HHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHH
Confidence 458888888887762 2333 5778889999999999998767766766666 99999999998842211
Q ss_pred --hhc--cccceeccccccccCC----CchhhhccccccccccccccccccC----CC--CCCCccceEeccCCCcccc-
Q 006884 137 --FRS--LQLNALDLSFNAFTGN----IPPGFQNLTRLHLLNLQNNSISGAI----PP--LNLPRLKILNFSNNNLNGS- 201 (627)
Q Consensus 137 --~~~--~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~----~~--~~~~~L~~L~l~~N~l~~~- 201 (627)
+.. .+|+.|+|++|.+++. ++..+..+++|++|+|++|++++.. +. ..+++|+.|++++|.+++.
T Consensus 130 ~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~ 209 (319)
T cd00116 130 KGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEG 209 (319)
T ss_pred HHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHH
Confidence 111 4789999999999853 3345667778999999999998521 11 1456999999999998743
Q ss_pred ---CCCcCCCCCCCcccC
Q 006884 202 ---IPDSLQTFPNSSFVG 216 (627)
Q Consensus 202 ---~p~~~~~~~~l~~~~ 216 (627)
++..+..+++|..++
T Consensus 210 ~~~l~~~~~~~~~L~~L~ 227 (319)
T cd00116 210 ASALAETLASLKSLEVLN 227 (319)
T ss_pred HHHHHHHhcccCCCCEEe
Confidence 334455566666665
No 482
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=98.66 E-value=8.4e-09 Score=102.44 Aligned_cols=157 Identities=25% Similarity=0.350 Sum_probs=118.3
Q ss_pred EeeCCCCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCch-hhcc-
Q 006884 63 TCNVNRSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPA-FRSL- 140 (627)
Q Consensus 63 ~C~~~~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~-~~~~- 140 (627)
+|++.. =...+-++-+|+ .+|.+ + -+.-..|+|..|+|+.+-|..|+.+++|+.||||+|.|+.+-|. |.++
T Consensus 42 ~Cs~~~--g~~VdCr~~GL~-eVP~~-L--P~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~ 115 (498)
T KOG4237|consen 42 TCSDVE--GGIVDCRGKGLT-EVPAN-L--PPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLA 115 (498)
T ss_pred ccCCCC--CceEEccCCCcc-cCccc-C--CCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhH
Confidence 565422 234566777777 56652 2 12456799999999977777999999999999999999999886 4444
Q ss_pred cc-ceeccccccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCCC-cCCCCCCCccc-
Q 006884 141 QL-NALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPD-SLQTFPNSSFV- 215 (627)
Q Consensus 141 ~L-~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~-~~~~~~~l~~~- 215 (627)
+| +.+++++|+|+......|++|.+|+.|.+.-|++.-..... .+++|..|.+.+|.+. .++. .|..+..++.+
T Consensus 116 ~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlh 194 (498)
T KOG4237|consen 116 SLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLH 194 (498)
T ss_pred hhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHh
Confidence 44 55566669999655568999999999999999998555443 8999999999999998 5554 77777776655
Q ss_pred --CCCCCCCCCCC
Q 006884 216 --GNSMLCGLPLT 226 (627)
Q Consensus 216 --~n~~l~~~~~~ 226 (627)
-|+..|+|.+.
T Consensus 195 lA~np~icdCnL~ 207 (498)
T KOG4237|consen 195 LAQNPFICDCNLP 207 (498)
T ss_pred hhcCccccccccc
Confidence 46777776653
No 483
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.65 E-value=1.2e-08 Score=76.92 Aligned_cols=38 Identities=26% Similarity=0.422 Sum_probs=17.0
Q ss_pred cccEEEccCCcCCCCCCCCcCccccccEEeeccccccc
Q 006884 95 ALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSG 132 (627)
Q Consensus 95 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 132 (627)
+|+.|+|++|+|+...+..|..+++|++|+|++|.++.
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~ 39 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTS 39 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESE
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCc
Confidence 34445555555543333344444444444444444443
No 484
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.62 E-value=5.2e-07 Score=86.67 Aligned_cols=137 Identities=24% Similarity=0.263 Sum_probs=96.0
Q ss_pred HHHhcccCcCCceEEEEEEEcCCcEEEEEEecccc-----------------------cCHHHHHHHHHHHHHhccC-Cc
Q 006884 336 RASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVA-----------------------ATKREFEQQMEVVGTIGKH-SN 391 (627)
Q Consensus 336 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-----------------------~~~~~~~~e~~~l~~l~~h-~n 391 (627)
.+..+.||-|--+.||.|....|.++|||.=+... ......++|.++|.+|..+ -.
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 34578899999999999999999999999632110 0123467788899988333 24
Q ss_pred eeceeeEEeeCCceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe
Q 006884 392 VVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL 471 (627)
Q Consensus 392 iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl 471 (627)
+...+++ +...+||||++|-.|...- ++-...-.++..|+.-+.-+-..| |||+|+.+-||++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r----------~~~en~~~il~~il~~~~~~~~~G---iVHGDlSefNIlV 235 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR----------LDVENPDEILDKILEEVRKAYRRG---IVHGDLSEFNILV 235 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc----------CcccCHHHHHHHHHHHHHHHHHcC---ccccCCchheEEE
Confidence 5555544 4567999999886653221 122233344555555555555666 9999999999999
Q ss_pred cCCCCeEEeecccccccC
Q 006884 472 TQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 472 ~~~~~~ki~DfG~a~~~~ 489 (627)
++||.+.++||--+....
T Consensus 236 ~~dg~~~vIDwPQ~v~~~ 253 (304)
T COG0478 236 TEDGDIVVIDWPQAVPIS 253 (304)
T ss_pred ecCCCEEEEeCcccccCC
Confidence 999999999998765543
No 485
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.51 E-value=1.5e-09 Score=114.99 Aligned_cols=124 Identities=25% Similarity=0.284 Sum_probs=99.2
Q ss_pred cEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCch-hhccccceeccc
Q 006884 70 RVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPA-FRSLQLNALDLS 148 (627)
Q Consensus 70 ~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~-~~~~~L~~L~ls 148 (627)
.+...+.+.|.|+ .+- .++.-++.|+.|||++|+++..- .+..|++|++|||++|++..++-- ..+.+|+.|.|+
T Consensus 165 ~L~~a~fsyN~L~-~mD-~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~L~~L~lr 240 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMD-ESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGCKLQLLNLR 240 (1096)
T ss_pred hHhhhhcchhhHH-hHH-HHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhhhheeeeec
Confidence 3556666777776 333 37888999999999999998433 788999999999999999987642 333479999999
Q ss_pred cccccCCCchhhhccccccccccccccccccC---CCCCCCccceEeccCCCcc
Q 006884 149 FNAFTGNIPPGFQNLTRLHLLNLQNNSISGAI---PPLNLPRLKILNFSNNNLN 199 (627)
Q Consensus 149 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~---~~~~~~~L~~L~l~~N~l~ 199 (627)
+|.++. + ..+.+|.+|+.||++.|-|.+.- |-..+..|+.|+|.+|++-
T Consensus 241 nN~l~t-L-~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 241 NNALTT-L-RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ccHHHh-h-hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 999983 3 46889999999999999988633 2337888999999999985
No 486
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.50 E-value=7.2e-07 Score=95.84 Aligned_cols=140 Identities=16% Similarity=0.280 Sum_probs=93.7
Q ss_pred cccCcCCceEEEEEEEcCCcEEEEEEeccccc----------------------C-------------------HHHHHH
Q 006884 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAA----------------------T-------------------KREFEQ 378 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----------------------~-------------------~~~~~~ 378 (627)
+.|+.++-|.||+|++++|+.||||+.+.... . +=++.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 56789999999999999999999998643100 0 012333
Q ss_pred HHHHHHHhc----cCCceeceeeEEeeCCceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHH-HHHHHh
Q 006884 379 QMEVVGTIG----KHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARG-IAFIHS 453 (627)
Q Consensus 379 e~~~l~~l~----~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~-l~~LH~ 453 (627)
|...+.++. ..+++.-..-|+.-.....++|||++|-.+.+...... ..++ +..++..++++ +.-+-.
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~----~g~d---~k~ia~~~~~~f~~q~~~ 283 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS----AGID---RKELAELLVRAFLRQLLR 283 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh----cCCC---HHHHHHHHHHHHHHHHHh
Confidence 444443332 44555544445555677889999999988887743221 1244 23333333332 233334
Q ss_pred cCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006884 454 EGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 454 ~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
.| +.|.|.+|.||+++.++.+.+.|||+...+.
T Consensus 284 dg---ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~ 316 (517)
T COG0661 284 DG---FFHADPHPGNILVRSDGRIVLLDFGIVGRLD 316 (517)
T ss_pred cC---ccccCCCccceEEecCCcEEEEcCcceecCC
Confidence 55 9999999999999999999999999987664
No 487
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.46 E-value=4.5e-06 Score=81.11 Aligned_cols=140 Identities=14% Similarity=0.180 Sum_probs=85.1
Q ss_pred cccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCc-eeceeeEEeeCCceeEEEecCCCCc-H
Q 006884 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSN-VVPVRAYYYSKDEKLVVYSYMPAGS-L 417 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~n-iv~~~~~~~~~~~~~lv~e~~~~gs-L 417 (627)
+.||+|..+.||+. .+..+++|.... ........+|.+++..+....- +.+.+++....+...+|||+++|.+ +
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~-~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~ 82 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNP-GFDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSF 82 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCC-CCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccch
Confidence 67999999999984 245677887754 3345667889999988843322 4566777766777789999998863 1
Q ss_pred HHH---------------------hhhcCCCCCCCCCHHHHHH-HHH----------HHH-HHHHHHHhc-CCCCeeecC
Q 006884 418 FML---------------------LHRNRSDGGTALDWNSRMK-IAL----------GTA-RGIAFIHSE-GGAKFTHGN 463 (627)
Q Consensus 418 ~~~---------------------l~~~~~~~~~~l~~~~~~~-i~~----------~ia-~~l~~LH~~-~~~~ivH~D 463 (627)
... +|..... ......... +.. .+. ....+|... ..+.++|+|
T Consensus 83 ~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~---~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD 159 (226)
T TIGR02172 83 SRIISDNPSRLEEIAKIFAEMAKKLHSTKCD---TSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGD 159 (226)
T ss_pred hhhhcCCHHHHHHHHHHHHHHHHHHhCCCCC---CCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecC
Confidence 111 1111000 111111000 000 001 112233221 124578999
Q ss_pred CCCCCeEecCCCCeEEeecccccc
Q 006884 464 IKSSNVLLTQDLNGCISDVGLAHL 487 (627)
Q Consensus 464 lkp~NILl~~~~~~ki~DfG~a~~ 487 (627)
+.|.||++++++ +.|+||+.+..
T Consensus 160 ~~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 160 FQIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred CCCCcEEEcCCC-cEEEechhcCc
Confidence 999999999888 99999998753
No 488
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.42 E-value=2.9e-06 Score=81.30 Aligned_cols=108 Identities=20% Similarity=0.257 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHhcc-CCceeceeeEEeeCC----ceeEEEecCCCC-cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHH
Q 006884 373 KREFEQQMEVVGTIGK-HSNVVPVRAYYYSKD----EKLVVYSYMPAG-SLFMLLHRNRSDGGTALDWNSRMKIALGTAR 446 (627)
Q Consensus 373 ~~~~~~e~~~l~~l~~-h~niv~~~~~~~~~~----~~~lv~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~ 446 (627)
.....+|...+..+.+ .-.+...+++..... ..++|+|++++. +|.+++.... ..+......++.+++.
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~-----~~~~~~~~~ll~~l~~ 129 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE-----QLDPSQRRELLRALAR 129 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc-----ccchhhHHHHHHHHHH
Confidence 3457778777776632 223455566665432 347999999884 7999887532 1455667889999999
Q ss_pred HHHHHHhcCCCCeeecCCCCCCeEecCCC---CeEEeeccccccc
Q 006884 447 GIAFIHSEGGAKFTHGNIKSSNVLLTQDL---NGCISDVGLAHLI 488 (627)
Q Consensus 447 ~l~~LH~~~~~~ivH~Dlkp~NILl~~~~---~~ki~DfG~a~~~ 488 (627)
.+.-||..| |+|+|+++.|||++.+. .+.++||+-++..
T Consensus 130 ~i~~lH~~g---i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 130 LIAKLHDAG---IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHHHHCc---CCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 999999999 99999999999999887 8899999987654
No 489
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.42 E-value=6.6e-08 Score=103.37 Aligned_cols=144 Identities=21% Similarity=0.289 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCCC-------------CCCccccCccccCC
Q 006884 442 LGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTA-------------TRTIGYRAPEVTET 508 (627)
Q Consensus 442 ~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~~-------------~~t~~y~aPE~~~~ 508 (627)
.+++.|+.|+|.. .++||++|.|++|.+++++..||+.|+.+.....+... .....|.|||++..
T Consensus 106 ~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 3556899999986 47999999999999999999999999987654331111 12346999999998
Q ss_pred CCCCCcchhHHHHHHHHHHH-hCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcc
Q 006884 509 RKASQKSDVYSFGVLLLEML-TGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCV 587 (627)
Q Consensus 509 ~~~~~~~Dv~S~Gvvl~el~-tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl 587 (627)
...+.++|+||+|+++|-+. .|+.-+...+........ . ... +.. ......+...++.+=+.+.+
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~----~-~~~-------~~~--~~~~s~~~p~el~~~l~k~l 249 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFS----R-NLL-------NAG--AFGYSNNLPSELRESLKKLL 249 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcchhhhh----h-ccc-------ccc--cccccccCcHHHHHHHHHHh
Confidence 88899999999999999998 566555543322211100 0 000 000 00001122234444555778
Q ss_pred cCCCCCCCCHHHHH
Q 006884 588 AKVPDSRPKMDDVV 601 (627)
Q Consensus 588 ~~~P~~RPs~~ev~ 601 (627)
..++.-||++.++.
T Consensus 250 ~~~~~~rp~~~~l~ 263 (700)
T KOG2137|consen 250 NGDSAVRPTLDLLL 263 (700)
T ss_pred cCCcccCcchhhhh
Confidence 89999999776654
No 490
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.40 E-value=1.2e-07 Score=95.77 Aligned_cols=132 Identities=27% Similarity=0.296 Sum_probs=97.3
Q ss_pred CCCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCC-CCCCcCccccccEEeeccccccccC--chhhccccc
Q 006884 67 NRSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGT-LPSDITSISSLQYVYLQNNYFSGVL--PAFRSLQLN 143 (627)
Q Consensus 67 ~~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~ls~N~l~~~~--~~~~~~~L~ 143 (627)
+-++++.|+|+.|.+.-......-..+++|+.|.|+.+.|+-. +-..+..+++|+.|+|..|..-+.. +......|+
T Consensus 170 qLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~ 249 (505)
T KOG3207|consen 170 QLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQ 249 (505)
T ss_pred hcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHh
Confidence 3478999999999987554443445788999999999998731 1122346799999999999622222 122234799
Q ss_pred eeccccccccCCCc--hhhhcccccccccccccccccc-CCC-------CCCCccceEeccCCCcc
Q 006884 144 ALDLSFNAFTGNIP--PGFQNLTRLHLLNLQNNSISGA-IPP-------LNLPRLKILNFSNNNLN 199 (627)
Q Consensus 144 ~L~ls~N~l~~~~p--~~~~~l~~L~~L~l~~N~l~~~-~~~-------~~~~~L~~L~l~~N~l~ 199 (627)
.|||++|++- ..+ ...+.++.|+.|+++.+.+... .|+ ..+++|++|++..|++.
T Consensus 250 ~LdLs~N~li-~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~ 314 (505)
T KOG3207|consen 250 ELDLSNNNLI-DFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR 314 (505)
T ss_pred hccccCCccc-ccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccc
Confidence 9999999987 344 4678899999999999998752 222 17899999999999995
No 491
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.37 E-value=6.7e-08 Score=82.31 Aligned_cols=88 Identities=23% Similarity=0.316 Sum_probs=51.2
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhcc-ccceecc
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSL-QLNALDL 147 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~-~L~~L~l 147 (627)
.+++.++|++|++. .+|+..-..++.++.|+|++|.|+ .+|.++..++.|+.|++++|.|...+-.+..+ +|..||.
T Consensus 53 ~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~~~p~vi~~L~~l~~Lds 130 (177)
T KOG4579|consen 53 YELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLNAEPRVIAPLIKLDMLDS 130 (177)
T ss_pred ceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccccchHHHHHHHhHHHhcC
Confidence 45666666666666 455533344556666666666666 56666666666666666666666554444333 4555555
Q ss_pred ccccccCCCchh
Q 006884 148 SFNAFTGNIPPG 159 (627)
Q Consensus 148 s~N~l~~~~p~~ 159 (627)
.+|.+. .+|-.
T Consensus 131 ~~na~~-eid~d 141 (177)
T KOG4579|consen 131 PENARA-EIDVD 141 (177)
T ss_pred CCCccc-cCcHH
Confidence 555555 34443
No 492
>PRK09902 hypothetical protein; Provisional
Probab=98.37 E-value=9.9e-06 Score=76.22 Aligned_cols=138 Identities=13% Similarity=0.089 Sum_probs=100.5
Q ss_pred CcCCceEEEEEEEcCCcEEEEEEeccc-------ccCHHHHHHHHHHHHHhccC-CceeceeeEEe-eC----CceeEEE
Q 006884 343 GKGSYGSTYKAILEDGTTVVVKRLREV-------AATKREFEQQMEVVGTIGKH-SNVVPVRAYYY-SK----DEKLVVY 409 (627)
Q Consensus 343 g~G~~g~Vy~~~~~~~~~vavK~~~~~-------~~~~~~~~~e~~~l~~l~~h-~niv~~~~~~~-~~----~~~~lv~ 409 (627)
|+||-+-|+..... |..+-+|+-... ......|.+|...+..+... -.+.... ++. .. ...++|+
T Consensus 27 ~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEE
Confidence 67888889998776 457889975411 12567899999998888422 2233333 332 11 2357899
Q ss_pred ecCCC-CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC--eEEeeccccc
Q 006884 410 SYMPA-GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN--GCISDVGLAH 486 (627)
Q Consensus 410 e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~--~ki~DfG~a~ 486 (627)
|-+++ -+|.+++.... -.+.+...+..+..+++..+.-||+.| +.|+|+.+.||+++.++. ++++||--++
T Consensus 105 e~L~g~~~L~~~l~~~~---~~~~~~~~k~~il~~va~~ia~LH~~G---v~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 105 EDMAGFISIADWYAQHA---VSPYSDEVRQAMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EeCCCCccHHHHHhcCC---cCCcchHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 97653 58888886432 124566777899999999999999999 999999999999987777 8999998765
Q ss_pred cc
Q 006884 487 LI 488 (627)
Q Consensus 487 ~~ 488 (627)
..
T Consensus 179 ~~ 180 (216)
T PRK09902 179 RR 180 (216)
T ss_pred hh
Confidence 43
No 493
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.31 E-value=1.7e-07 Score=94.58 Aligned_cols=148 Identities=25% Similarity=0.253 Sum_probs=106.1
Q ss_pred CcEEEEEcCCCCcccccCc-cccCCCCcccEEEccCCcCCCCCCCCc-CccccccEEeeccccccccCc-h--hhccccc
Q 006884 69 SRVIGIHLPGIGFTGPIPA-NSIGKLDALKILSLRSNYLNGTLPSDI-TSISSLQYVYLQNNYFSGVLP-A--FRSLQLN 143 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~ls~N~l~~~~~-~--~~~~~L~ 143 (627)
.+|+.|||++|=+..-.|- .....|++|+.|+|+.|++.-..-+.. ..++.|+.|.|+.+.|+.--- . ...++|+
T Consensus 146 ~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~ 225 (505)
T KOG3207|consen 146 PNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLE 225 (505)
T ss_pred CcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHH
Confidence 6899999999987743221 146789999999999999974333322 367999999999999983211 1 1124799
Q ss_pred eeccccccccCCCchhhhccccccccccccccccccC--CCC-CCCccceEeccCCCcccc-CCCc-----CCCCCCCcc
Q 006884 144 ALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAI--PPL-NLPRLKILNFSNNNLNGS-IPDS-----LQTFPNSSF 214 (627)
Q Consensus 144 ~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~--~~~-~~~~L~~L~l~~N~l~~~-~p~~-----~~~~~~l~~ 214 (627)
.|+|..|...+.--.....+..|+.|||++|++.... +.. .++.|..|+++.|.++.. +|+. ...+++|.+
T Consensus 226 ~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~ 305 (505)
T KOG3207|consen 226 VLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEY 305 (505)
T ss_pred HhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhccccCcchhcCCCccchhhhccccccee
Confidence 9999999643333345566779999999999997543 222 899999999999999743 3433 345666766
Q ss_pred cC
Q 006884 215 VG 216 (627)
Q Consensus 215 ~~ 216 (627)
+.
T Consensus 306 L~ 307 (505)
T KOG3207|consen 306 LN 307 (505)
T ss_pred ee
Confidence 64
No 494
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.30 E-value=3.2e-08 Score=84.21 Aligned_cols=84 Identities=23% Similarity=0.323 Sum_probs=54.5
Q ss_pred ccccEEeeccccccccCchhhcc--ccceeccccccccCCCchhhhccccccccccccccccccCCCC-CCCccceEecc
Q 006884 118 SSLQYVYLQNNYFSGVLPAFRSL--QLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL-NLPRLKILNFS 194 (627)
Q Consensus 118 ~~L~~L~ls~N~l~~~~~~~~~~--~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~ 194 (627)
..|+..+|++|.|...++.+... .++.|+|++|.|+ .+|..+..++.|+.|++++|.|...+-.. .+.+|..|+..
T Consensus 53 ~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~~~p~vi~~L~~l~~Lds~ 131 (177)
T KOG4579|consen 53 YELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLNAEPRVIAPLIKLDMLDSP 131 (177)
T ss_pred ceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccccchHHHHHHHhHHHhcCC
Confidence 44444566666666665554432 5677777777777 57777777777777777777777433322 56777777777
Q ss_pred CCCccccCC
Q 006884 195 NNNLNGSIP 203 (627)
Q Consensus 195 ~N~l~~~~p 203 (627)
+|.+. .+|
T Consensus 132 ~na~~-eid 139 (177)
T KOG4579|consen 132 ENARA-EID 139 (177)
T ss_pred CCccc-cCc
Confidence 77765 444
No 495
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.29 E-value=1e-06 Score=60.86 Aligned_cols=37 Identities=43% Similarity=0.900 Sum_probs=26.5
Q ss_pred hhHHHHHHHHHhhCCC---CCCCCCCCC--CCCCCCccceEee
Q 006884 28 NSDKQALLDFADAVPH---ARKLNWNAA--APVCSSWIGVTCN 65 (627)
Q Consensus 28 ~~~~~~l~~~~~~~~~---~~~~~W~~~--~~~c~~w~gv~C~ 65 (627)
+.|++||++||+++.. ..+.+|+.. .++| +|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C-~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPC-SWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CC-CSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCe-eeccEEeC
Confidence 5799999999999964 346699987 4555 89999995
No 496
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.22 E-value=2.4e-07 Score=98.86 Aligned_cols=125 Identities=26% Similarity=0.299 Sum_probs=84.4
Q ss_pred cEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhccccceecccc
Q 006884 70 RVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQLNALDLSF 149 (627)
Q Consensus 70 ~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~L~~L~ls~ 149 (627)
.+..+++..|.+.- +- +.+..+++|+.|+|.+|+|. .+...+..+++|++|+|++|+|+.+.+-.....|+.|++++
T Consensus 73 ~l~~l~l~~n~i~~-~~-~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~~l~~l~~L~~L~l~~ 149 (414)
T KOG0531|consen 73 SLKELNLRQNLIAK-IL-NHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLEGLSTLTLLKELNLSG 149 (414)
T ss_pred hHHhhccchhhhhh-hh-cccccccceeeeeccccchh-hcccchhhhhcchheeccccccccccchhhccchhhheecc
Confidence 45555566666653 11 14677778888888888887 34333677788888888888887776644434577888888
Q ss_pred ccccCCCchhhhccccccccccccccccccCC--CCCCCccceEeccCCCcc
Q 006884 150 NAFTGNIPPGFQNLTRLHLLNLQNNSISGAIP--PLNLPRLKILNFSNNNLN 199 (627)
Q Consensus 150 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~~~~L~~L~l~~N~l~ 199 (627)
|.|+. + ..+..+++|+.+++++|+++..-+ ...+.+|+.+++.+|.+.
T Consensus 150 N~i~~-~-~~~~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l~~l~l~~n~i~ 199 (414)
T KOG0531|consen 150 NLISD-I-SGLESLKSLKLLDLSYNRIVDIENDELSELISLEELDLGGNSIR 199 (414)
T ss_pred Ccchh-c-cCCccchhhhcccCCcchhhhhhhhhhhhccchHHHhccCCchh
Confidence 88773 3 345557778888888888775444 257777777778777775
No 497
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.21 E-value=2.9e-05 Score=74.14 Aligned_cols=137 Identities=19% Similarity=0.219 Sum_probs=90.0
Q ss_pred cccCcCCceEEEEEEEcCCcEEEEEEecccccC--------------------HH-----HHHHHHHHHHHhc-cCCcee
Q 006884 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAAT--------------------KR-----EFEQQMEVVGTIG-KHSNVV 393 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------------~~-----~~~~e~~~l~~l~-~h~niv 393 (627)
..|.+|.-+.||+|.-.++..+|||+++..... .+ -.++|...|.++. .+-.+.
T Consensus 54 g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP 133 (268)
T COG1718 54 GCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVP 133 (268)
T ss_pred eeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 357788889999999888999999998532111 00 1234555555542 223333
Q ss_pred ceeeEEeeCCceeEEEecCCCC-cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCeEe
Q 006884 394 PVRAYYYSKDEKLVVYSYMPAG-SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS-EGGAKFTHGNIKSSNVLL 471 (627)
Q Consensus 394 ~~~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~Dlkp~NILl 471 (627)
+.+++. ...+||||+... .-.-.|. ..++.......+..++++.+.-|-. .+ +||+||..-|||+
T Consensus 134 ~Pi~~~----~nVLvMEfIg~~g~pAP~Lk------Dv~~e~~e~~~~~~~~v~~~~~l~~~a~---LVHgDLSEyNiL~ 200 (268)
T COG1718 134 EPIAFR----NNVLVMEFIGDDGLPAPRLK------DVPLELEEAEGLYEDVVEYMRRLYKEAG---LVHGDLSEYNILV 200 (268)
T ss_pred Cceeec----CCeEEEEeccCCCCCCCCcc------cCCcCchhHHHHHHHHHHHHHHHHHhcC---cccccchhhheEE
Confidence 444432 346899998553 1111111 1223333566777888888888877 55 9999999999999
Q ss_pred cCCCCeEEeecccccccCC
Q 006884 472 TQDLNGCISDVGLAHLINF 490 (627)
Q Consensus 472 ~~~~~~ki~DfG~a~~~~~ 490 (627)
. ++.+.|+|||-|.....
T Consensus 201 ~-~~~p~iID~~QaV~~~h 218 (268)
T COG1718 201 H-DGEPYIIDVSQAVTIDH 218 (268)
T ss_pred E-CCeEEEEECccccccCC
Confidence 9 89999999998876653
No 498
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.16 E-value=1.1e-06 Score=60.88 Aligned_cols=40 Identities=28% Similarity=0.488 Sum_probs=30.3
Q ss_pred CcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccC
Q 006884 94 DALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVL 134 (627)
Q Consensus 94 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 134 (627)
++|+.|+|++|+|+ .+|+.|++|++|++|+|++|+++.+.
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~~i~ 40 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPISDIS 40 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCSBEG
T ss_pred CcceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCCCCc
Confidence 46888888888888 67767888888888888888887543
No 499
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.13 E-value=7.2e-07 Score=95.26 Aligned_cols=105 Identities=23% Similarity=0.263 Sum_probs=85.2
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhccccceeccc
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQLNALDLS 148 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~L~~L~ls 148 (627)
..+..|+|.+|+|... .. .+..+++|+.|+|++|.|+... .+..++.|+.|++++|.++.+........|+.++++
T Consensus 95 ~~l~~l~l~~n~i~~i-~~-~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~l~~N~i~~~~~~~~l~~L~~l~l~ 170 (414)
T KOG0531|consen 95 KSLEALDLYDNKIEKI-EN-LLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELNLSGNLISDISGLESLKSLKLLDLS 170 (414)
T ss_pred cceeeeeccccchhhc-cc-chhhhhcchheecccccccccc--chhhccchhhheeccCcchhccCCccchhhhcccCC
Confidence 6799999999999843 32 3788999999999999999543 477788899999999999987554334589999999
Q ss_pred cccccCCCchh-hhccccccccccccccccc
Q 006884 149 FNAFTGNIPPG-FQNLTRLHLLNLQNNSISG 178 (627)
Q Consensus 149 ~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~~ 178 (627)
+|+++. ++.. ...+.+|+.+++.+|.+..
T Consensus 171 ~n~i~~-ie~~~~~~~~~l~~l~l~~n~i~~ 200 (414)
T KOG0531|consen 171 YNRIVD-IENDELSELISLEELDLGGNSIRE 200 (414)
T ss_pred cchhhh-hhhhhhhhccchHHHhccCCchhc
Confidence 999995 4332 5778889999999998874
No 500
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.12 E-value=3.5e-05 Score=76.08 Aligned_cols=143 Identities=17% Similarity=0.156 Sum_probs=87.0
Q ss_pred ccCcCCc-eEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHHH
Q 006884 341 VLGKGSY-GSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFM 419 (627)
Q Consensus 341 ~lg~G~~-g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~ 419 (627)
.|-.|.. ..||+.... +..+++|+..... ..+..+|++++..+..+--+.+++++....+..++|||+++|.++..
T Consensus 5 ~~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~--~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~ 81 (244)
T cd05150 5 RVTEGQSGATVYRLDGK-NPGLYLKIAPSGP--TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAA 81 (244)
T ss_pred ecCCCCCcCeEEEEcCC-CCcEEEEecCCCc--ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhH
Confidence 3555665 789999765 4778888875432 34577899998888666445566777666666789999999977654
Q ss_pred Hh-------------------hhcCCCCCCCCC--HHHHHHHHH--------------------HHHHHHHHHHh----c
Q 006884 420 LL-------------------HRNRSDGGTALD--WNSRMKIAL--------------------GTARGIAFIHS----E 454 (627)
Q Consensus 420 ~l-------------------~~~~~~~~~~l~--~~~~~~i~~--------------------~ia~~l~~LH~----~ 454 (627)
.. +.... ...... ......... .+......|-. .
T Consensus 82 ~~~~~~~~~~~~~l~~~l~~lH~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 160 (244)
T cd05150 82 LWEELEPERLVDALAEALRRLHALPV-ADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAE 160 (244)
T ss_pred hhcccCHHHHHHHHHHHHHHHhcCCc-ccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCc
Confidence 31 11100 001111 000000000 01111222211 1
Q ss_pred CCCCeeecCCCCCCeEecCCCCeEEeecccccc
Q 006884 455 GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHL 487 (627)
Q Consensus 455 ~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~ 487 (627)
..+.++|+|+.|.|||++.+....|+||+.+..
T Consensus 161 ~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~ 193 (244)
T cd05150 161 EDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGV 193 (244)
T ss_pred CceEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence 234589999999999999987788999997643
Done!