Query 006884
Match_columns 627
No_of_seqs 547 out of 5164
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 11:30:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006884.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006884hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gt4_A Tyrosine-protein kinase 100.0 3.7E-52 1.2E-56 422.5 22.0 249 339-608 31-305 (308)
2 4aoj_A High affinity nerve gro 100.0 5.6E-52 1.9E-56 425.1 22.1 251 339-610 46-320 (329)
3 4asz_A BDNF/NT-3 growth factor 100.0 2.2E-52 7.6E-57 422.2 17.7 250 339-609 18-289 (299)
4 3omv_A RAF proto-oncogene seri 100.0 1.7E-51 5.8E-56 415.7 22.9 249 339-610 41-301 (307)
5 3hmm_A TGF-beta receptor type- 100.0 1.3E-51 4.5E-56 419.2 16.1 260 339-611 8-299 (303)
6 4fih_A Serine/threonine-protei 100.0 2.3E-50 7.9E-55 412.5 19.1 239 340-603 80-324 (346)
7 3fpq_A Serine/threonine-protei 100.0 9E-50 3.1E-54 400.2 22.9 241 340-603 32-283 (290)
8 4g3f_A NF-kappa-beta-inducing 100.0 8.9E-50 3E-54 407.0 22.3 243 339-609 63-316 (336)
9 4b9d_A Serine/threonine-protei 100.0 7.7E-50 2.6E-54 409.3 20.1 241 339-603 29-277 (350)
10 4ase_A Vascular endothelial gr 100.0 7.8E-50 2.7E-54 412.4 19.3 253 339-610 69-348 (353)
11 4fie_A Serine/threonine-protei 100.0 4.2E-49 1.4E-53 413.1 19.1 240 339-603 156-401 (423)
12 4aw0_A HPDK1, 3-phosphoinositi 100.0 8.7E-49 3E-53 394.9 18.3 238 339-603 37-285 (311)
13 3hyh_A Carbon catabolite-derep 100.0 4.7E-48 1.6E-52 384.3 22.0 237 339-603 18-263 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 2.5E-48 8.7E-53 391.6 13.1 237 339-602 29-281 (304)
15 4g31_A Eukaryotic translation 100.0 8.4E-47 2.9E-51 382.1 19.2 239 339-602 10-279 (299)
16 4b99_A Mitogen-activated prote 100.0 4.6E-44 1.6E-48 375.8 24.6 255 339-609 59-353 (398)
17 4f9c_A Cell division cycle 7-r 100.0 6E-44 2E-48 370.9 22.9 187 339-537 26-250 (361)
18 3v5w_A G-protein coupled recep 100.0 3.6E-43 1.2E-47 384.2 21.1 240 339-602 194-449 (689)
19 2qkw_B Protein kinase; three-h 100.0 1.3E-42 4.4E-47 357.6 23.6 265 339-609 44-315 (321)
20 3uto_A Twitchin; kinase, muscl 100.0 1.1E-42 3.9E-47 382.9 20.4 243 339-603 162-411 (573)
21 3soc_A Activin receptor type-2 100.0 1E-42 3.4E-47 358.5 17.5 256 339-610 29-319 (322)
22 3uim_A Brassinosteroid insensi 100.0 1.5E-42 5E-47 357.9 18.1 279 327-608 18-310 (326)
23 3s95_A LIMK-1, LIM domain kina 100.0 1.7E-41 5.7E-46 347.4 21.7 246 339-610 15-283 (310)
24 4hcu_A Tyrosine-protein kinase 100.0 5.2E-41 1.8E-45 336.4 24.2 248 339-611 15-268 (269)
25 3p86_A Serine/threonine-protei 100.0 7.6E-42 2.6E-46 349.6 17.2 255 339-614 42-303 (309)
26 2psq_A Fibroblast growth facto 100.0 5.7E-41 1.9E-45 351.9 23.0 252 339-610 86-365 (370)
27 2nru_A Interleukin-1 receptor- 100.0 3E-40 1E-44 337.5 27.0 272 326-609 12-306 (307)
28 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.2E-40 4.1E-45 333.6 23.4 248 339-611 13-266 (268)
29 3fxz_A Serine/threonine-protei 100.0 6.6E-41 2.3E-45 340.8 21.4 240 339-603 25-270 (297)
30 3gen_A Tyrosine-protein kinase 100.0 2.9E-40 1E-44 333.5 23.8 248 339-611 29-282 (283)
31 3kul_A Ephrin type-A receptor 100.0 1.3E-40 4.4E-45 343.1 21.4 249 339-612 54-316 (325)
32 3q4u_A Activin receptor type-1 100.0 6.7E-41 2.3E-45 341.2 18.8 251 339-607 13-300 (301)
33 2c30_A Serine/threonine-protei 100.0 3E-40 1E-44 339.8 23.1 239 340-603 51-295 (321)
34 3fe3_A MAP/microtubule affinit 100.0 3.3E-40 1.1E-44 340.0 23.1 238 339-603 20-265 (328)
35 1qcf_A Haematopoetic cell kina 100.0 1.8E-40 6.1E-45 357.8 21.1 247 339-610 193-445 (454)
36 2izr_A Casein kinase I isoform 100.0 4.1E-40 1.4E-44 340.2 22.0 252 339-610 14-282 (330)
37 1k9a_A Carboxyl-terminal SRC k 100.0 4.6E-40 1.6E-44 354.0 23.1 248 339-612 198-448 (450)
38 2qol_A Ephrin receptor; recept 100.0 2.9E-40 9.9E-45 346.8 20.6 247 339-610 50-310 (373)
39 3t9t_A Tyrosine-protein kinase 100.0 9.6E-40 3.3E-44 326.6 23.5 248 339-611 13-266 (267)
40 1opk_A P150, C-ABL, proto-onco 100.0 2.6E-40 8.8E-45 360.1 20.5 248 339-610 225-479 (495)
41 3cbl_A C-FES, proto-oncogene t 100.0 8.1E-41 2.8E-45 351.9 15.7 247 339-610 119-375 (377)
42 3tt0_A Basic fibroblast growth 100.0 1.5E-39 5.2E-44 342.9 25.2 254 339-612 74-355 (382)
43 3zgw_A Maternal embryonic leuc 100.0 7.4E-40 2.5E-44 339.4 22.4 239 339-604 15-262 (347)
44 1tki_A Titin; serine kinase, m 100.0 3.9E-40 1.3E-44 338.7 20.1 244 339-604 10-259 (321)
45 1csn_A Casein kinase-1; phosph 100.0 6E-40 2E-44 333.7 21.0 253 339-610 15-284 (298)
46 3mdy_A Bone morphogenetic prot 100.0 6.4E-40 2.2E-44 339.6 21.5 257 339-610 42-332 (337)
47 3l9p_A Anaplastic lymphoma kin 100.0 5.9E-40 2E-44 343.9 20.9 251 339-610 76-346 (367)
48 4dc2_A Protein kinase C IOTA t 100.0 1.4E-39 4.7E-44 342.6 23.6 245 339-602 57-318 (396)
49 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 5.8E-40 2E-44 353.5 21.1 248 339-611 189-442 (452)
50 3poz_A Epidermal growth factor 100.0 3.4E-40 1.2E-44 340.4 18.2 246 339-610 20-279 (327)
51 3ugc_A Tyrosine-protein kinase 100.0 2.9E-40 1E-44 335.7 17.3 254 339-610 15-292 (295)
52 3kn6_A Ribosomal protein S6 ki 100.0 4.5E-40 1.5E-44 339.0 18.9 246 340-603 17-271 (325)
53 3niz_A Rhodanese family protei 100.0 7.5E-40 2.6E-44 335.3 20.2 252 339-602 26-300 (311)
54 3vhe_A Vascular endothelial gr 100.0 1.6E-40 5.4E-45 347.4 15.5 253 339-610 27-356 (359)
55 4euu_A Serine/threonine-protei 100.0 3.9E-39 1.3E-43 331.2 25.5 264 339-610 14-310 (319)
56 3dtc_A Mitogen-activated prote 100.0 3.2E-40 1.1E-44 330.9 17.0 245 339-607 12-271 (271)
57 1o6l_A RAC-beta serine/threoni 100.0 1.8E-39 6.2E-44 335.5 22.9 238 339-603 10-261 (337)
58 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.1E-39 3.9E-44 339.2 21.2 238 339-602 28-280 (353)
59 4eqm_A Protein kinase; transfe 100.0 2.3E-39 7.9E-44 328.9 22.9 251 339-611 16-277 (294)
60 2yab_A Death-associated protei 100.0 1E-39 3.4E-44 340.5 20.7 241 339-602 17-272 (361)
61 2y0a_A Death-associated protei 100.0 7.5E-40 2.6E-44 337.5 19.2 242 339-603 16-272 (326)
62 4f0f_A Serine/threonine-protei 100.0 1.4E-39 4.9E-44 329.2 20.7 247 339-607 24-287 (287)
63 1luf_A Muscle-specific tyrosin 100.0 8.9E-40 3E-44 339.4 19.3 252 339-611 52-337 (343)
64 4fvq_A Tyrosine-protein kinase 100.0 8.9E-40 3E-44 330.9 18.5 252 339-616 13-282 (289)
65 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.3E-39 4.6E-44 336.1 19.8 237 339-603 14-259 (336)
66 3lb7_A RAF proto-oncogene seri 100.0 3.2E-39 1.1E-43 329.9 21.9 249 339-610 41-301 (307)
67 1t46_A HOMO sapiens V-KIT hard 100.0 8.1E-40 2.8E-44 335.2 17.4 254 339-611 28-309 (313)
68 4fr4_A YANK1, serine/threonine 100.0 3.1E-39 1.1E-43 338.8 22.1 240 339-602 20-271 (384)
69 3a8x_A Protein kinase C IOTA t 100.0 3.9E-39 1.3E-43 334.4 22.6 245 339-602 14-275 (345)
70 3uc3_A Serine/threonine-protei 100.0 2.5E-39 8.6E-44 338.2 21.2 244 339-603 25-275 (361)
71 3tki_A Serine/threonine-protei 100.0 7.4E-40 2.5E-44 337.0 16.7 241 339-603 12-262 (323)
72 3g2f_A Bone morphogenetic prot 100.0 1.2E-39 4E-44 337.6 18.2 266 339-620 18-329 (336)
73 1nxk_A MAP kinase-activated pr 100.0 3.4E-39 1.2E-43 341.7 22.1 245 340-605 68-324 (400)
74 3kfa_A Tyrosine-protein kinase 100.0 2.3E-39 7.9E-44 327.7 19.5 248 339-610 18-272 (288)
75 3qd2_B Eukaryotic translation 100.0 3.1E-39 1.1E-43 333.5 20.9 240 339-603 11-326 (332)
76 1fot_A TPK1 delta, CAMP-depend 100.0 4.2E-39 1.4E-43 330.3 21.6 237 339-602 11-258 (318)
77 3c0i_A Peripheral plasma membr 100.0 3.9E-39 1.4E-43 335.6 21.7 244 339-602 29-286 (351)
78 1rjb_A FL cytokine receptor; k 100.0 2.2E-39 7.4E-44 336.8 19.5 255 339-612 50-337 (344)
79 2bdw_A Hypothetical protein K1 100.0 6.7E-39 2.3E-43 335.0 23.3 242 339-603 34-285 (362)
80 2eva_A TAK1 kinase - TAB1 chim 100.0 9.2E-39 3.1E-43 326.6 23.8 251 339-611 13-265 (307)
81 3soa_A Calcium/calmodulin-depe 100.0 3.3E-39 1.1E-43 345.5 21.3 242 339-603 16-268 (444)
82 3op5_A Serine/threonine-protei 100.0 1.2E-39 4E-44 341.5 17.4 254 339-610 40-330 (364)
83 1xjd_A Protein kinase C, theta 100.0 1.8E-39 6E-44 336.5 18.4 238 339-602 22-269 (345)
84 3kmu_A ILK, integrin-linked ki 100.0 3.7E-39 1.3E-43 322.9 20.2 248 339-609 15-270 (271)
85 3kex_A Receptor tyrosine-prote 100.0 5.4E-40 1.9E-44 338.5 14.4 246 339-610 18-277 (325)
86 2h8h_A Proto-oncogene tyrosine 100.0 2.2E-39 7.4E-44 356.0 20.0 247 339-610 272-524 (535)
87 2ivs_A Proto-oncogene tyrosine 100.0 2.1E-39 7E-44 332.3 18.5 251 339-610 28-312 (314)
88 2x4f_A Myosin light chain kina 100.0 2.8E-39 9.5E-44 339.2 19.8 241 340-602 95-342 (373)
89 3p1a_A MYT1 kinase, membrane-a 100.0 1.2E-38 4E-43 326.4 24.0 236 339-602 62-304 (311)
90 3qup_A Tyrosine-protein kinase 100.0 2.7E-39 9.1E-44 333.0 19.0 252 339-611 28-300 (323)
91 3gxj_A TGF-beta receptor type- 100.0 2.9E-41 9.8E-46 344.2 4.0 255 339-611 8-299 (303)
92 2zv2_A Calcium/calmodulin-depe 100.0 1.5E-39 5.3E-44 330.9 16.8 239 339-603 18-293 (298)
93 2pvf_A Fibroblast growth facto 100.0 1.1E-38 3.9E-43 329.9 23.5 254 339-612 40-321 (334)
94 3llt_A Serine/threonine kinase 100.0 9.3E-40 3.2E-44 341.7 15.4 192 339-537 40-262 (360)
95 1qpc_A LCK kinase; alpha beta 100.0 8.2E-39 2.8E-43 322.2 21.7 247 339-610 18-270 (279)
96 1mp8_A Focal adhesion kinase 1 100.0 3E-39 1E-43 325.8 18.5 246 339-610 20-277 (281)
97 3v8s_A RHO-associated protein 100.0 1.4E-39 4.9E-44 344.4 16.7 241 339-603 74-330 (410)
98 3uzp_A CKI-delta, CKID, casein 100.0 2.1E-38 7.2E-43 321.9 24.4 253 339-611 14-282 (296)
99 1u59_A Tyrosine-protein kinase 100.0 7.9E-39 2.7E-43 323.8 21.0 249 340-614 16-277 (287)
100 1ob3_A PFPK5, cell division co 100.0 1.2E-39 4.1E-44 330.0 15.0 250 339-603 7-281 (288)
101 4hgt_A Casein kinase I isoform 100.0 1.5E-38 5.1E-43 322.9 22.9 252 339-610 14-281 (296)
102 1u5q_A Serine/threonine protei 100.0 7.2E-39 2.5E-43 332.9 21.0 242 339-605 59-308 (348)
103 1b6c_B TGF-B superfamily recep 100.0 6.1E-39 2.1E-43 333.0 20.3 255 339-611 47-338 (342)
104 2ac3_A MAP kinase-interacting 100.0 3E-39 1E-43 331.5 17.7 249 340-603 19-296 (316)
105 3e7e_A HBUB1, BUB1A, mitotic c 100.0 5.7E-39 2E-43 336.4 20.2 245 339-610 70-340 (365)
106 3gni_B Strad alpha; kinase fol 100.0 1.7E-38 6E-43 335.7 23.9 260 339-607 30-340 (389)
107 4e5w_A Tyrosine-protein kinase 100.0 4.2E-39 1.4E-43 328.1 18.3 252 339-608 26-301 (302)
108 1mqb_A Ephrin type-A receptor 100.0 2.5E-38 8.6E-43 327.2 24.3 247 339-610 49-310 (333)
109 2w4o_A Calcium/calmodulin-depe 100.0 9.1E-39 3.1E-43 332.5 21.1 242 339-603 58-306 (349)
110 2i0e_A Protein kinase C-beta I 100.0 5.8E-39 2E-43 333.7 19.3 239 339-603 25-277 (353)
111 1rdq_E PKA C-alpha, CAMP-depen 100.0 8.2E-39 2.8E-43 332.5 20.3 237 339-602 46-293 (350)
112 3pls_A Macrophage-stimulating 100.0 1.6E-38 5.4E-43 323.2 21.9 252 339-614 26-292 (298)
113 4eut_A Serine/threonine-protei 100.0 1.2E-38 4.2E-43 337.5 21.9 267 339-613 14-313 (396)
114 3o0g_A Cell division protein k 100.0 1.5E-38 5E-43 322.7 21.6 250 339-602 7-282 (292)
115 3c1x_A Hepatocyte growth facto 100.0 6.6E-39 2.3E-43 336.2 19.5 252 339-615 94-361 (373)
116 3lzb_A Epidermal growth factor 100.0 8.7E-39 3E-43 329.7 20.1 247 339-611 20-280 (327)
117 1kob_A Twitchin; kinase, intra 100.0 9.4E-39 3.2E-43 336.2 20.5 243 339-603 56-305 (387)
118 2ozo_A Tyrosine-protein kinase 100.0 6.9E-39 2.4E-43 357.1 20.5 244 341-610 343-599 (613)
119 3g33_A Cell division protein k 100.0 7.5E-39 2.6E-43 327.4 18.6 252 339-603 14-297 (308)
120 2i1m_A Macrophage colony-stimu 100.0 4.5E-39 1.5E-43 332.8 17.0 254 339-611 51-328 (333)
121 2zmd_A Dual specificity protei 100.0 3E-38 1E-42 333.5 23.6 240 339-603 61-321 (390)
122 2qr7_A Ribosomal protein S6 ki 100.0 4.6E-39 1.6E-43 333.4 17.0 243 339-603 27-278 (342)
123 2acx_A G protein-coupled recep 100.0 1.4E-38 4.9E-43 347.4 21.7 244 339-603 189-445 (576)
124 2pmi_A Negative RE, cyclin-dep 100.0 3.7E-39 1.2E-43 331.1 16.0 263 339-609 10-302 (317)
125 3a62_A Ribosomal protein S6 ki 100.0 1.4E-38 4.9E-43 328.1 20.5 237 339-602 22-276 (327)
126 2v62_A Serine/threonine-protei 100.0 3.8E-39 1.3E-43 335.1 16.3 254 339-609 42-328 (345)
127 4aw2_A Serine/threonine-protei 100.0 4.7E-39 1.6E-43 343.1 17.3 244 339-603 79-339 (437)
128 3og7_A AKAP9-BRAF fusion prote 100.0 1.1E-38 3.7E-43 323.1 19.2 248 339-609 29-288 (289)
129 2xir_A Vascular endothelial gr 100.0 8.8E-39 3E-43 327.9 18.7 254 339-611 32-312 (316)
130 4fl3_A Tyrosine-protein kinase 100.0 9.7E-39 3.3E-43 356.7 20.6 243 340-609 375-631 (635)
131 3oz6_A Mitogen-activated prote 100.0 3E-38 1E-42 333.7 23.2 189 339-537 14-234 (388)
132 3dbq_A Dual specificity protei 100.0 2.8E-38 9.5E-43 328.3 22.2 240 339-603 14-274 (343)
133 2h34_A Serine/threonine-protei 100.0 4.8E-38 1.6E-42 321.6 23.6 252 339-614 39-301 (309)
134 3cok_A Serine/threonine-protei 100.0 9.7E-39 3.3E-43 321.5 18.1 239 339-603 16-263 (278)
135 1wak_A Serine/threonine-protei 100.0 1.1E-38 3.8E-43 337.9 19.4 258 339-603 42-392 (397)
136 2vd5_A DMPK protein; serine/th 100.0 5.7E-39 1.9E-43 340.0 16.9 243 339-603 66-328 (412)
137 3lxl_A Tyrosine-protein kinase 100.0 3.6E-39 1.2E-43 332.7 15.0 256 339-612 28-306 (327)
138 2a2a_A Death-associated protei 100.0 1.2E-38 4E-43 328.0 18.8 242 339-603 17-273 (321)
139 3f66_A Hepatocyte growth facto 100.0 2.6E-38 8.9E-43 321.7 21.1 248 339-611 30-293 (298)
140 2a19_B Interferon-induced, dou 100.0 8.6E-39 2.9E-43 322.7 17.3 242 339-612 16-277 (284)
141 3cc6_A Protein tyrosine kinase 100.0 2.2E-38 7.7E-43 319.4 20.1 246 339-610 17-274 (281)
142 3lxp_A Non-receptor tyrosine-p 100.0 1.2E-38 4.3E-43 327.3 18.6 253 339-611 36-312 (318)
143 3q60_A ROP5B; pseudokinase, tr 100.0 2.9E-39 1E-43 339.4 14.1 247 339-602 67-352 (371)
144 1fvr_A Tyrosine-protein kinase 100.0 3.1E-38 1E-42 325.7 21.3 253 339-611 30-302 (327)
145 3is5_A Calcium-dependent prote 100.0 5.8E-38 2E-42 317.1 22.8 243 339-602 27-278 (285)
146 3ll6_A Cyclin G-associated kin 100.0 1.3E-38 4.4E-43 329.6 18.5 248 339-610 33-309 (337)
147 3sv0_A Casein kinase I-like; t 100.0 3E-38 1E-42 340.8 22.1 252 339-609 12-278 (483)
148 3bhy_A Death-associated protei 100.0 1.7E-38 5.8E-43 320.5 18.9 253 339-614 10-279 (283)
149 3fdn_A Serine/threonine-protei 100.0 6.4E-38 2.2E-42 315.7 23.0 239 339-604 14-259 (279)
150 4agu_A Cyclin-dependent kinase 100.0 8.6E-39 2.9E-43 327.3 16.7 253 339-603 8-285 (311)
151 2y94_A 5'-AMP-activated protei 100.0 4.1E-38 1.4E-42 339.2 22.8 238 339-603 21-267 (476)
152 2wqm_A Serine/threonine-protei 100.0 5.2E-38 1.8E-42 321.4 22.5 255 339-612 37-300 (310)
153 3brb_A Proto-oncogene tyrosine 100.0 3.5E-38 1.2E-42 323.2 21.2 250 339-609 39-308 (313)
154 1byg_A CSK, protein (C-termina 100.0 7.9E-39 2.7E-43 322.2 16.1 248 339-612 26-276 (278)
155 3lm5_A Serine/threonine-protei 100.0 8.7E-39 3E-43 329.8 16.7 244 340-603 35-288 (327)
156 2buj_A Serine/threonine-protei 100.0 1.5E-38 5E-43 326.5 18.0 256 339-614 34-311 (317)
157 1xbb_A Tyrosine-protein kinase 100.0 2.3E-38 7.7E-43 321.1 19.2 245 341-612 24-282 (291)
158 3f3z_A Calcium/calmodulin-depe 100.0 6E-38 2.1E-42 315.5 22.1 240 339-602 14-261 (277)
159 3dls_A PAS domain-containing s 100.0 2.4E-38 8.2E-43 327.4 19.1 232 339-603 29-275 (335)
160 1p4o_A Insulin-like growth fac 100.0 3.2E-38 1.1E-42 324.8 19.8 255 339-614 30-304 (322)
161 3kk8_A Calcium/calmodulin depe 100.0 1E-37 3.6E-42 314.9 23.2 242 339-603 11-262 (284)
162 3c4z_A Rhodopsin kinase; Ser/T 100.0 7.4E-38 2.5E-42 341.0 23.5 244 340-602 191-448 (543)
163 3ork_A Serine/threonine protei 100.0 1.3E-38 4.4E-43 326.2 16.4 247 339-608 17-280 (311)
164 3hko_A Calcium/calmodulin-depe 100.0 4.3E-38 1.5E-42 327.1 20.4 246 339-602 31-330 (345)
165 2r5t_A Serine/threonine-protei 100.0 1.6E-38 5.3E-43 332.8 17.2 234 339-599 43-286 (373)
166 1vzo_A Ribosomal protein S6 ki 100.0 2.2E-38 7.6E-43 330.5 18.3 244 339-604 59-323 (355)
167 3ttj_A Mitogen-activated prote 100.0 3.6E-38 1.2E-42 340.0 20.4 251 339-603 67-356 (464)
168 2eue_A Carbon catabolite derep 100.0 9.3E-38 3.2E-42 313.8 22.0 237 339-603 18-263 (275)
169 4ejn_A RAC-alpha serine/threon 100.0 1.3E-38 4.6E-43 342.6 16.9 237 339-602 153-404 (446)
170 1x8b_A WEE1HU, WEE1-like prote 100.0 3.6E-38 1.2E-42 318.5 19.0 241 339-603 16-280 (289)
171 3kvw_A DYRK2, dual specificity 100.0 1.9E-38 6.4E-43 339.2 17.7 193 339-538 102-303 (429)
172 2y7j_A Phosphorylase B kinase 100.0 2E-37 6.8E-42 324.4 24.0 242 340-603 100-360 (365)
173 3byv_A Rhoptry kinase; malaria 100.0 1.5E-39 5.1E-44 342.3 7.7 243 339-608 78-367 (377)
174 1t4h_A Serine/threonine-protei 100.0 2.8E-37 9.4E-42 312.9 24.0 242 339-603 31-283 (290)
175 2jii_A Serine/threonine-protei 100.0 3.7E-38 1.3E-42 328.6 17.9 254 339-611 47-338 (352)
176 2yfx_A Tyrosine-protein kinase 100.0 1.1E-37 3.6E-42 321.7 20.9 252 339-611 35-306 (327)
177 2w1i_A JAK2; chromosomal rearr 100.0 3.6E-38 1.2E-42 325.1 17.4 254 339-610 46-323 (326)
178 2yex_A Serine/threonine-protei 100.0 9.1E-38 3.1E-42 313.8 19.9 241 339-603 12-262 (276)
179 2jam_A Calcium/calmodulin-depe 100.0 2.8E-37 9.5E-42 315.1 23.4 242 339-603 14-262 (304)
180 3i6u_A CDS1, serine/threonine- 100.0 1.3E-37 4.5E-42 331.8 21.8 242 339-603 140-400 (419)
181 3mtl_A Cell division protein k 100.0 5.2E-39 1.8E-43 331.1 10.6 252 339-602 7-281 (324)
182 3eqc_A Dual specificity mitoge 100.0 7.4E-38 2.5E-42 327.4 19.4 190 339-537 38-233 (360)
183 1u46_A ACK-1, activated CDC42 100.0 1.2E-38 4.2E-43 322.8 12.9 251 339-614 23-289 (291)
184 3mwu_A Calmodulin-domain prote 100.0 3.1E-37 1.1E-41 335.7 24.8 241 339-603 27-277 (486)
185 3rp9_A Mitogen-activated prote 100.0 1.1E-37 3.8E-42 336.7 21.1 181 339-529 58-279 (458)
186 3rgf_A Cyclin-dependent kinase 100.0 7.9E-38 2.7E-42 332.4 19.4 194 339-538 26-240 (405)
187 3nsz_A CK II alpha, casein kin 100.0 2.4E-37 8.1E-42 319.4 22.3 249 339-602 41-319 (330)
188 2vgo_A Serine/threonine-protei 100.0 1.6E-37 5.4E-42 313.7 20.5 237 339-602 19-262 (284)
189 1z57_A Dual specificity protei 100.0 7.5E-38 2.6E-42 323.9 18.1 254 339-603 19-329 (339)
190 3pfq_A PKC-B, PKC-beta, protei 100.0 1E-37 3.4E-42 350.9 20.6 238 339-602 346-597 (674)
191 1cm8_A Phosphorylated MAP kina 100.0 4E-37 1.4E-41 322.3 23.7 251 339-608 30-315 (367)
192 2x7f_A TRAF2 and NCK-interacti 100.0 2.7E-37 9.3E-42 318.4 22.2 242 339-602 29-286 (326)
193 3a7i_A MST3 kinase, serine/thr 100.0 5.9E-37 2E-41 312.5 24.4 240 339-605 27-273 (303)
194 4aaa_A Cyclin-dependent kinase 100.0 1.5E-37 5.2E-42 321.1 20.2 254 339-603 30-307 (331)
195 2j7t_A Serine/threonine-protei 100.0 2.8E-37 9.6E-42 314.6 21.8 241 339-602 24-275 (302)
196 3com_A Serine/threonine-protei 100.0 1.7E-37 5.8E-42 318.2 20.3 240 339-602 34-278 (314)
197 3mi9_A Cell division protein k 100.0 7.9E-38 2.7E-42 326.0 18.0 252 339-603 22-312 (351)
198 2owb_A Serine/threonine-protei 100.0 1.9E-37 6.5E-42 320.9 20.5 238 339-603 46-292 (335)
199 2rku_A Serine/threonine-protei 100.0 1.2E-37 4E-42 316.3 18.4 238 339-603 20-266 (294)
200 2clq_A Mitogen-activated prote 100.0 1.3E-37 4.3E-42 316.0 18.6 243 340-603 28-279 (295)
201 1q8y_A SR protein kinase; tran 100.0 2.2E-37 7.6E-42 325.2 20.9 258 339-603 24-334 (373)
202 2h6d_A 5'-AMP-activated protei 100.0 4.3E-37 1.5E-41 309.0 21.9 238 339-603 16-262 (276)
203 3gbz_A Kinase, CMGC CDK; ssgci 100.0 9.7E-38 3.3E-42 322.2 17.0 248 339-602 39-318 (329)
204 2vx3_A Dual specificity tyrosi 100.0 2.2E-37 7.4E-42 326.4 19.9 194 339-537 59-261 (382)
205 3nyv_A Calmodulin-domain prote 100.0 1.7E-37 5.9E-42 337.7 19.7 241 339-603 31-282 (484)
206 1ua2_A CAK, cell division prot 100.0 2.1E-37 7.3E-42 322.0 19.5 250 339-603 15-292 (346)
207 2w5a_A Serine/threonine-protei 100.0 1.3E-37 4.4E-42 313.4 17.1 252 339-609 11-274 (279)
208 3lij_A Calcium/calmodulin depe 100.0 4.2E-37 1.4E-41 335.2 22.3 241 339-603 42-292 (494)
209 3q5i_A Protein kinase; CDPK, m 100.0 2.5E-37 8.6E-42 337.8 20.4 241 339-603 41-302 (504)
210 1phk_A Phosphorylase kinase; g 100.0 7.4E-37 2.5E-41 310.9 22.1 242 339-602 22-283 (298)
211 3n9x_A Phosphotransferase; mal 100.0 5E-37 1.7E-41 328.7 21.8 187 339-535 31-253 (432)
212 2r3i_A Cell division protein k 100.0 6E-37 2.1E-41 311.7 21.4 250 339-602 8-283 (299)
213 3an0_A Dual specificity mitoge 100.0 1E-37 3.5E-42 323.6 15.6 244 339-602 56-310 (340)
214 3pg1_A Mitogen-activated prote 100.0 3.9E-37 1.3E-41 322.1 20.1 250 339-603 27-317 (362)
215 2xrw_A Mitogen-activated prote 100.0 4.1E-37 1.4E-41 322.9 19.8 247 339-603 30-319 (371)
216 2vwi_A Serine/threonine-protei 100.0 5.8E-38 2E-42 319.7 12.9 252 339-602 20-287 (303)
217 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.7E-37 6E-42 318.7 16.3 248 339-613 38-306 (319)
218 3fme_A Dual specificity mitoge 100.0 3.5E-37 1.2E-41 311.9 18.3 243 339-602 12-266 (290)
219 2ycf_A Serine/threonine-protei 100.0 8.1E-37 2.8E-41 314.4 20.9 241 339-602 15-274 (322)
220 3e3p_A Protein kinase, putativ 100.0 8.8E-37 3E-41 319.1 21.0 260 339-610 28-324 (360)
221 2pml_X PFPK7, Ser/Thr protein 100.0 3.8E-37 1.3E-41 320.3 18.1 251 339-602 36-322 (348)
222 2j0j_A Focal adhesion kinase 1 100.0 5.4E-37 1.9E-41 343.9 20.6 246 339-610 395-652 (656)
223 4exu_A Mitogen-activated prote 100.0 1.5E-36 5E-41 318.7 22.3 253 339-609 47-332 (371)
224 3qyz_A Mitogen-activated prote 100.0 2E-37 6.8E-42 324.6 15.5 251 339-603 32-314 (364)
225 2fst_X Mitogen-activated prote 100.0 6.9E-37 2.3E-41 320.3 19.3 248 339-603 34-312 (367)
226 2rio_A Serine/threonine-protei 100.0 4.5E-37 1.5E-41 329.2 18.1 245 339-602 20-295 (434)
227 2eu9_A Dual specificity protei 100.0 4.7E-37 1.6E-41 320.2 17.8 253 339-602 24-333 (355)
228 3fhr_A MAP kinase-activated pr 100.0 3.3E-37 1.1E-41 319.1 16.2 244 340-603 35-288 (336)
229 2wei_A Calmodulin-domain prote 100.0 4.4E-36 1.5E-40 303.6 23.2 240 339-602 27-276 (287)
230 4e7w_A Glycogen synthase kinas 100.0 6E-37 2.1E-41 324.1 17.5 260 339-610 45-331 (394)
231 3cek_A Dual specificity protei 100.0 3.2E-36 1.1E-40 308.6 22.2 241 339-604 33-294 (313)
232 1zy4_A Serine/threonine-protei 100.0 3.3E-36 1.1E-40 306.5 21.7 241 339-603 11-284 (303)
233 2wtk_C Serine/threonine-protei 100.0 3.1E-36 1.1E-40 307.4 21.5 239 339-603 10-264 (305)
234 3eb0_A Putative uncharacterize 100.0 7.1E-37 2.4E-41 322.6 17.2 257 339-607 12-328 (383)
235 1blx_A Cyclin-dependent kinase 100.0 6.4E-37 2.2E-41 315.5 16.4 251 339-602 16-296 (326)
236 1j1b_A Glycogen synthase kinas 100.0 8.1E-37 2.8E-41 325.8 17.7 259 339-609 59-345 (420)
237 3aln_A Dual specificity mitoge 100.0 7.6E-37 2.6E-41 315.3 16.2 249 339-603 27-286 (327)
238 3coi_A Mitogen-activated prote 100.0 7.9E-37 2.7E-41 318.7 15.3 254 339-610 29-315 (353)
239 2b9h_A MAP kinase FUS3, mitoge 100.0 3.6E-36 1.2E-40 313.6 20.1 256 339-608 16-313 (353)
240 3a99_A Proto-oncogene serine/t 100.0 1E-36 3.4E-41 313.4 15.0 233 339-603 48-294 (320)
241 2dyl_A Dual specificity mitoge 100.0 4.8E-36 1.6E-40 307.8 19.4 241 339-602 30-283 (318)
242 2i6l_A Mitogen-activated prote 100.0 4.8E-36 1.7E-40 307.9 17.9 248 339-603 16-306 (320)
243 3p23_A Serine/threonine-protei 100.0 3.2E-36 1.1E-40 321.7 17.0 239 339-602 29-283 (432)
244 2iwi_A Serine/threonine-protei 100.0 3.4E-36 1.2E-40 308.2 14.3 233 339-603 36-284 (312)
245 3uqc_A Probable conserved tran 100.0 7.3E-35 2.5E-39 294.2 20.6 230 339-614 36-270 (286)
246 3qa8_A MGC80376 protein; kinas 100.0 7.5E-36 2.6E-40 329.1 13.2 267 339-616 19-316 (676)
247 2pzi_A Probable serine/threoni 100.0 1.9E-35 6.3E-40 334.5 16.4 233 339-608 85-327 (681)
248 3m2w_A MAP kinase-activated pr 100.0 1.2E-34 4.2E-39 294.8 19.3 226 340-603 24-257 (299)
249 3dzo_A Rhoptry kinase domain; 100.0 2.5E-35 8.7E-40 313.5 11.3 236 339-602 83-363 (413)
250 2vuw_A Serine/threonine-protei 100.0 2.5E-34 8.6E-39 297.6 9.5 234 337-601 23-329 (336)
251 4azs_A Methyltransferase WBDD; 99.9 4.2E-29 1.5E-33 274.8 5.4 181 341-533 241-437 (569)
252 1ogq_A PGIP-2, polygalacturona 99.9 9.9E-27 3.4E-31 237.9 13.2 189 25-216 2-203 (313)
253 3en9_A Glycoprotease, O-sialog 99.9 7.4E-26 2.5E-30 247.6 9.8 177 339-535 341-539 (540)
254 3rgz_A Protein brassinosteroid 99.9 3.4E-24 1.2E-28 245.7 11.1 191 22-216 5-229 (768)
255 4ecn_A Leucine-rich repeat pro 99.9 1.6E-24 5.6E-29 247.7 7.1 185 26-216 266-579 (876)
256 4eco_A Uncharacterized protein 99.9 2.6E-24 8.8E-29 241.3 7.2 184 28-216 29-336 (636)
257 1zar_A RIO2 kinase; serine kin 99.9 4.7E-22 1.6E-26 199.5 9.3 138 340-507 96-252 (282)
258 4fcg_A Uncharacterized protein 99.9 2.5E-22 8.4E-27 206.5 5.7 187 25-216 23-235 (328)
259 3rgz_A Protein brassinosteroid 99.8 1.4E-21 4.7E-26 224.2 10.3 114 117-230 631-750 (768)
260 3m19_A Variable lymphocyte rec 99.8 1.4E-20 4.9E-25 185.8 13.3 153 69-222 35-194 (251)
261 3e6j_A Variable lymphocyte rec 99.8 1.3E-19 4.3E-24 176.2 12.3 151 49-202 12-175 (229)
262 1ogq_A PGIP-2, polygalacturona 99.8 4.5E-20 1.5E-24 188.4 7.5 141 69-210 125-268 (313)
263 2o6q_A Variable lymphocyte rec 99.8 9.4E-19 3.2E-23 174.6 13.1 146 70-216 38-187 (270)
264 2v70_A SLIT-2, SLIT homolog 2 99.8 4.5E-19 1.6E-23 171.1 10.3 149 73-225 15-171 (220)
265 2o6s_A Variable lymphocyte rec 99.8 1.3E-18 4.3E-23 166.5 12.9 146 57-203 7-165 (208)
266 2v9t_B SLIT homolog 2 protein 99.8 1E-18 3.4E-23 168.7 10.9 130 94-223 32-168 (220)
267 1zth_A RIO1 serine protein kin 99.8 1.9E-18 6.4E-23 171.1 11.8 133 339-489 52-220 (258)
268 3rfs_A Internalin B, repeat mo 99.8 5.3E-18 1.8E-22 169.4 14.6 154 68-224 62-222 (272)
269 2v70_A SLIT-2, SLIT homolog 2 99.8 4.9E-18 1.7E-22 163.8 13.4 147 57-203 11-170 (220)
270 2o6q_A Variable lymphocyte rec 99.8 7.2E-18 2.5E-22 168.2 14.6 156 68-224 60-222 (270)
271 2v9t_B SLIT homolog 2 protein 99.7 4.8E-18 1.6E-22 163.9 12.4 143 57-200 11-166 (220)
272 3e6j_A Variable lymphocyte rec 99.7 1.4E-17 4.8E-22 161.7 14.0 155 59-223 14-175 (229)
273 4fcg_A Uncharacterized protein 99.7 2.1E-18 7.1E-23 177.1 8.4 145 69-216 127-283 (328)
274 2xot_A Amphoterin-induced prot 99.7 1.7E-18 5.7E-23 180.4 6.6 168 57-225 18-207 (361)
275 1p9a_G Platelet glycoprotein I 99.7 2.2E-17 7.4E-22 166.4 13.3 149 70-223 56-211 (290)
276 1ozn_A Reticulon 4 receptor; N 99.7 9.4E-18 3.2E-22 168.7 10.1 147 69-216 56-207 (285)
277 2z80_A TOLL-like receptor 2, v 99.7 1.2E-17 4.2E-22 173.3 9.2 164 49-216 23-204 (353)
278 2z81_A CD282 antigen, TOLL-lik 99.7 1.5E-17 5.2E-22 183.3 9.1 157 58-216 5-178 (549)
279 1ozn_A Reticulon 4 receptor; N 99.7 6E-17 2.1E-21 162.8 12.5 148 68-216 31-183 (285)
280 2z66_A Variable lymphocyte rec 99.7 8.6E-18 2.9E-22 170.8 6.4 159 57-216 7-181 (306)
281 3m19_A Variable lymphocyte rec 99.7 7.8E-17 2.7E-21 158.8 12.6 134 68-202 58-195 (251)
282 1w8a_A SLIT protein; signaling 99.7 1.1E-17 3.8E-22 157.7 6.2 128 72-203 11-143 (192)
283 2z62_A TOLL-like receptor 4, v 99.7 1.1E-16 3.9E-21 160.0 13.0 154 70-224 77-241 (276)
284 2o6s_A Variable lymphocyte rec 99.7 2.8E-16 9.5E-21 150.1 15.0 149 72-224 10-165 (208)
285 2z66_A Variable lymphocyte rec 99.7 4.6E-17 1.6E-21 165.4 9.5 145 69-215 78-228 (306)
286 3rfs_A Internalin B, repeat mo 99.7 1.4E-16 4.9E-21 158.9 12.8 136 67-203 83-222 (272)
287 1p9a_G Platelet glycoprotein I 99.7 8.9E-17 3E-21 161.9 11.2 145 69-216 31-178 (290)
288 3zyj_A Leucine-rich repeat-con 99.7 9.6E-17 3.3E-21 171.8 11.8 156 68-225 111-297 (440)
289 3zyi_A Leucine-rich repeat-con 99.7 1.1E-16 3.7E-21 172.0 12.2 156 68-225 122-308 (452)
290 2id5_A Lingo-1, leucine rich r 99.7 4.9E-17 1.7E-21 176.0 8.8 158 58-216 12-182 (477)
291 3j0a_A TOLL-like receptor 5; m 99.7 8.5E-17 2.9E-21 186.3 10.6 85 141-225 481-565 (844)
292 3v47_A TOLL-like receptor 5B a 99.7 9.1E-17 3.1E-21 172.7 9.7 155 69-224 212-412 (455)
293 1w8a_A SLIT protein; signaling 99.7 1.7E-16 6E-21 149.5 10.5 153 57-209 8-172 (192)
294 4g8a_A TOLL-like receptor 4; l 99.7 5.1E-17 1.7E-21 182.0 7.7 145 68-213 51-200 (635)
295 2ell_A Acidic leucine-rich nuc 99.7 1.5E-16 5E-21 146.6 9.3 134 68-205 23-165 (168)
296 3zyi_A Leucine-rich repeat-con 99.7 1.6E-16 5.4E-21 170.7 11.0 157 58-215 55-247 (452)
297 3o6n_A APL1; leucine-rich repe 99.7 7.4E-17 2.5E-21 169.9 7.8 165 47-215 4-191 (390)
298 3oja_B Anopheles plasmodium-re 99.7 9.4E-17 3.2E-21 178.7 9.0 165 47-212 10-197 (597)
299 3v47_A TOLL-like receptor 5B a 99.7 1.1E-16 3.6E-21 172.2 8.8 151 58-209 9-177 (455)
300 2xwt_C Thyrotropin receptor; s 99.7 1.1E-16 3.9E-21 156.4 7.8 163 49-215 3-184 (239)
301 2ft3_A Biglycan; proteoglycan, 99.6 3.7E-16 1.3E-20 160.7 12.0 144 57-204 33-189 (332)
302 3vq2_A TLR4, TOLL-like recepto 99.6 1.2E-16 3.9E-21 178.5 8.3 138 71-209 401-543 (606)
303 3oja_A Leucine-rich immune mol 99.6 8.2E-17 2.8E-21 174.3 5.1 147 69-222 99-252 (487)
304 4b8c_D Glucose-repressible alc 99.6 9.3E-17 3.2E-21 182.0 5.4 176 28-208 131-338 (727)
305 1xku_A Decorin; proteoglycan, 99.6 8E-16 2.7E-20 158.0 11.8 141 57-199 31-184 (330)
306 2z62_A TOLL-like receptor 4, v 99.6 2.3E-16 7.7E-21 157.8 7.4 144 69-213 28-176 (276)
307 4eco_A Uncharacterized protein 99.6 1.7E-16 5.7E-21 177.8 6.7 146 68-216 205-383 (636)
308 3t6q_A CD180 antigen; protein- 99.6 3.2E-16 1.1E-20 174.9 8.6 154 59-213 14-180 (606)
309 3vq2_A TLR4, TOLL-like recepto 99.6 3.6E-16 1.2E-20 174.4 8.1 145 68-213 31-180 (606)
310 2wfh_A SLIT homolog 2 protein 99.6 1.6E-15 5.4E-20 143.0 11.1 123 73-200 14-140 (193)
311 2o6r_A Variable lymphocyte rec 99.6 1.8E-15 6.3E-20 140.4 11.3 130 58-203 8-141 (177)
312 4gyi_A RIO2 kinase; protein ki 99.6 3.2E-16 1.1E-20 161.2 6.6 134 339-489 100-266 (397)
313 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 7.5E-16 2.6E-20 170.2 10.0 153 67-224 351-514 (562)
314 2je0_A Acidic leucine-rich nuc 99.6 4.2E-16 1.4E-20 140.4 6.5 124 69-195 17-149 (149)
315 2o6r_A Variable lymphocyte rec 99.6 8.4E-16 2.9E-20 142.8 8.8 112 69-181 28-141 (177)
316 3t6q_A CD180 antigen; protein- 99.6 3.7E-16 1.3E-20 174.3 7.1 145 69-215 376-528 (606)
317 4glp_A Monocyte differentiatio 99.6 5.5E-16 1.9E-20 157.8 7.6 143 69-215 117-277 (310)
318 1wwl_A Monocyte differentiatio 99.6 2.1E-16 7.2E-21 161.1 4.2 132 70-202 96-244 (312)
319 1xeu_A Internalin C; cellular 99.6 1.4E-15 4.9E-20 150.7 10.0 138 69-216 41-178 (263)
320 3j0a_A TOLL-like receptor 5; m 99.6 6.7E-16 2.3E-20 178.7 8.7 149 58-209 15-171 (844)
321 4ezg_A Putative uncharacterize 99.6 1.1E-15 3.7E-20 144.7 8.2 140 69-216 44-187 (197)
322 1ziw_A TOLL-like receptor 3; i 99.6 1.9E-15 6.3E-20 171.1 11.5 155 70-225 455-627 (680)
323 4g8a_A TOLL-like receptor 4; l 99.6 1.3E-15 4.3E-20 170.6 9.9 157 69-225 420-585 (635)
324 3zyj_A Leucine-rich repeat-con 99.6 2.3E-15 8E-20 161.0 11.5 156 58-215 44-236 (440)
325 3cvr_A Invasion plasmid antige 99.6 1.1E-15 3.7E-20 167.3 9.0 146 48-215 35-185 (571)
326 4ecn_A Leucine-rich repeat pro 99.6 8.2E-16 2.8E-20 176.0 8.0 145 68-216 447-625 (876)
327 3oja_A Leucine-rich immune mol 99.6 4.8E-16 1.6E-20 168.3 5.8 31 372-403 322-352 (487)
328 3oja_B Anopheles plasmodium-re 99.6 1.7E-15 5.8E-20 168.5 10.3 109 69-178 75-185 (597)
329 2z7x_B TOLL-like receptor 1, v 99.6 8.3E-16 2.9E-20 168.2 7.6 151 69-224 324-485 (520)
330 1wwl_A Monocyte differentiatio 99.6 5.6E-16 1.9E-20 157.9 5.8 143 68-215 120-279 (312)
331 1xku_A Decorin; proteoglycan, 99.6 2E-15 6.8E-20 155.1 9.9 144 70-216 122-269 (330)
332 2z63_A TOLL-like receptor 4, v 99.6 1.9E-15 6.5E-20 167.2 9.8 153 70-224 374-535 (570)
333 2id5_A Lingo-1, leucine rich r 99.6 1.6E-15 5.5E-20 164.0 8.9 148 68-216 55-206 (477)
334 2wfh_A SLIT homolog 2 protein 99.6 5.1E-15 1.7E-19 139.5 11.2 126 97-225 13-144 (193)
335 1ziw_A TOLL-like receptor 3; i 99.6 1.2E-15 4.1E-20 172.7 8.1 147 68-215 24-176 (680)
336 2je0_A Acidic leucine-rich nuc 99.6 8.4E-16 2.9E-20 138.4 5.5 125 91-216 14-146 (149)
337 2ft3_A Biglycan; proteoglycan, 99.6 3.3E-15 1.1E-19 153.6 10.6 125 89-216 142-270 (332)
338 2z81_A CD282 antigen, TOLL-lik 99.6 2.1E-15 7.1E-20 166.1 9.2 149 69-224 361-514 (549)
339 2xwt_C Thyrotropin receptor; s 99.6 1.9E-15 6.3E-20 147.7 7.7 146 68-216 54-211 (239)
340 2ell_A Acidic leucine-rich nuc 99.6 2.3E-15 8E-20 138.4 8.0 126 91-217 21-154 (168)
341 3o6n_A APL1; leucine-rich repe 99.6 5.9E-15 2E-19 155.3 10.6 109 69-178 69-179 (390)
342 3o53_A Protein LRIM1, AGAP0063 99.6 5.6E-16 1.9E-20 158.3 2.2 147 69-222 99-252 (317)
343 1h6t_A Internalin B; cell adhe 99.6 7.2E-15 2.5E-19 148.0 10.2 138 69-216 68-206 (291)
344 4ay9_X Follicle-stimulating ho 99.6 9.6E-15 3.3E-19 151.3 10.9 96 57-153 9-117 (350)
345 2xot_A Amphoterin-induced prot 99.5 9.1E-15 3.1E-19 152.1 10.5 148 60-216 14-169 (361)
346 4ezg_A Putative uncharacterize 99.5 8.5E-15 2.9E-19 138.5 8.2 127 69-200 66-195 (197)
347 2z63_A TOLL-like receptor 4, v 99.5 4.7E-15 1.6E-19 164.0 7.1 144 68-212 27-175 (570)
348 1h6u_A Internalin H; cell adhe 99.5 1.3E-14 4.5E-19 147.3 9.9 138 69-216 63-201 (308)
349 1ds9_A Outer arm dynein; leuci 99.5 9.1E-17 3.1E-21 152.3 -5.8 144 70-217 19-181 (198)
350 2z7x_B TOLL-like receptor 1, v 99.5 4E-15 1.4E-19 162.7 6.2 139 69-210 21-164 (520)
351 1h6t_A Internalin B; cell adhe 99.5 1.4E-14 4.9E-19 145.8 9.6 137 69-216 46-184 (291)
352 1h6u_A Internalin H; cell adhe 99.5 1.7E-14 5.7E-19 146.6 10.0 122 70-199 42-164 (308)
353 3o53_A Protein LRIM1, AGAP0063 99.5 5.2E-15 1.8E-19 151.1 6.0 142 65-216 76-220 (317)
354 4glp_A Monocyte differentiatio 99.5 1.1E-14 3.8E-19 148.1 8.1 147 69-216 91-257 (310)
355 2z80_A TOLL-like receptor 2, v 99.5 2.2E-15 7.5E-20 156.3 2.7 146 68-215 75-227 (353)
356 3a79_B TLR6, VLRB.59, TOLL-lik 99.5 1.2E-14 4.2E-19 160.5 8.9 139 69-210 52-195 (562)
357 4b8c_D Glucose-repressible alc 99.5 1.7E-15 5.9E-20 171.6 1.7 140 67-210 222-365 (727)
358 1m9s_A Internalin B; cell inva 99.5 2.7E-14 9.4E-19 157.8 11.1 139 68-216 64-203 (605)
359 1a9n_A U2A', U2A'; complex (nu 99.5 1.4E-14 4.9E-19 134.3 7.3 125 69-199 19-153 (176)
360 1dce_A Protein (RAB geranylger 99.5 2.9E-14 9.8E-19 156.7 9.1 117 71-192 443-566 (567)
361 3g39_A Variable lymphocyte rec 99.5 1.3E-13 4.5E-18 126.9 9.7 105 72-180 12-118 (170)
362 1m9s_A Internalin B; cell inva 99.5 5.3E-14 1.8E-18 155.5 8.3 137 69-216 43-181 (605)
363 1o6v_A Internalin A; bacterial 99.5 9.9E-14 3.4E-18 149.5 10.2 138 69-215 221-358 (466)
364 3cvr_A Invasion plasmid antige 99.5 1.1E-13 3.7E-18 151.4 10.2 118 69-204 80-197 (571)
365 2r9u_A Variable lymphocyte rec 99.5 1.4E-13 4.7E-18 127.3 9.1 105 72-180 15-121 (174)
366 3g39_A Variable lymphocyte rec 99.4 1.8E-13 6.2E-18 126.0 9.5 105 96-203 11-119 (170)
367 1a9n_A U2A', U2A'; complex (nu 99.4 5.1E-14 1.8E-18 130.5 5.7 125 89-217 14-147 (176)
368 1xeu_A Internalin C; cellular 99.4 1.5E-13 5.3E-18 136.0 8.8 125 68-201 62-187 (263)
369 1jl5_A Outer protein YOPM; leu 99.4 2.7E-14 9.2E-19 153.0 2.6 135 69-215 11-158 (454)
370 4fmz_A Internalin; leucine ric 99.4 2E-13 6.9E-18 141.0 8.5 140 68-216 176-317 (347)
371 2r9u_A Variable lymphocyte rec 99.4 4.4E-13 1.5E-17 123.8 9.6 102 97-201 15-120 (174)
372 3g06_A SSPH2 (leucine-rich rep 99.4 9.8E-14 3.3E-18 153.6 5.7 145 48-210 14-164 (622)
373 4fmz_A Internalin; leucine ric 99.4 2.4E-13 8.2E-18 140.4 8.1 139 68-216 198-339 (347)
374 1o6v_A Internalin A; bacterial 99.4 3.7E-13 1.3E-17 145.0 9.7 139 68-215 198-336 (466)
375 3bz5_A Internalin-J, INLJ; leu 99.4 5.7E-13 2E-17 142.8 10.6 100 69-179 148-248 (457)
376 3bz5_A Internalin-J, INLJ; leu 99.4 7.9E-13 2.7E-17 141.7 11.6 116 70-197 43-159 (457)
377 1dce_A Protein (RAB geranylger 99.4 4.8E-13 1.6E-17 146.9 9.5 117 95-215 442-565 (567)
378 1jl5_A Outer protein YOPM; leu 99.4 1.6E-12 5.3E-17 139.3 11.8 132 70-216 112-243 (454)
379 2ast_B S-phase kinase-associat 99.4 2.2E-14 7.4E-19 147.6 -3.6 147 69-216 93-253 (336)
380 2ifg_A High affinity nerve gro 99.3 2E-12 6.7E-17 133.6 8.4 106 57-178 8-117 (347)
381 2ca6_A RAN GTPase-activating p 99.3 1E-13 3.5E-18 145.6 -1.9 149 68-216 59-250 (386)
382 3g06_A SSPH2 (leucine-rich rep 99.3 4.1E-12 1.4E-16 140.6 10.3 134 69-215 121-289 (622)
383 1ds9_A Outer arm dynein; leuci 99.3 4.5E-14 1.5E-18 133.6 -4.9 124 69-199 48-185 (198)
384 3goz_A Leucine-rich repeat-con 99.3 3.8E-13 1.3E-17 139.9 -0.2 136 69-204 22-185 (362)
385 2ast_B S-phase kinase-associat 99.3 3.1E-13 1.1E-17 138.8 -1.2 147 69-216 118-278 (336)
386 2ca6_A RAN GTPase-activating p 99.2 1.3E-13 4.3E-18 144.8 -5.8 132 69-201 94-259 (386)
387 2ifg_A High affinity nerve gro 99.2 9.4E-12 3.2E-16 128.5 8.2 102 98-201 12-118 (347)
388 3tm0_A Aminoglycoside 3'-phosp 99.2 7.2E-11 2.5E-15 116.7 12.3 136 340-486 20-212 (263)
389 3goz_A Leucine-rich repeat-con 99.2 3.5E-12 1.2E-16 132.5 1.9 143 73-216 2-173 (362)
390 1z7x_W Ribonuclease inhibitor; 99.1 2.8E-12 9.4E-17 137.8 -5.1 148 69-216 227-404 (461)
391 4ay9_X Follicle-stimulating ho 99.1 2.3E-10 7.9E-15 118.2 9.6 148 71-221 82-237 (350)
392 1z7x_W Ribonuclease inhibitor; 99.1 1.9E-12 6.6E-17 139.0 -6.5 135 69-204 199-359 (461)
393 1nd4_A Aminoglycoside 3'-phosp 99.1 3.5E-10 1.2E-14 111.4 9.6 132 341-487 26-214 (264)
394 3rw6_A Nuclear RNA export fact 99.0 3.2E-12 1.1E-16 125.3 -8.0 162 55-219 77-260 (267)
395 3dxp_A Putative acyl-COA dehyd 99.0 1.8E-09 6E-14 111.9 11.7 141 340-488 44-249 (359)
396 3sg8_A APH(2'')-ID; antibiotic 98.9 9.3E-10 3.2E-14 111.2 6.7 183 340-534 26-287 (304)
397 3sb4_A Hypothetical leucine ri 98.9 2.8E-09 9.6E-14 109.0 8.6 144 69-216 101-303 (329)
398 3un9_A NLR family member X1; l 98.9 7.6E-11 2.6E-15 122.5 -3.6 130 70-199 73-224 (372)
399 3un9_A NLR family member X1; l 98.8 3.4E-11 1.2E-15 125.1 -8.8 133 69-201 101-254 (372)
400 3sb4_A Hypothetical leucine ri 98.8 3.9E-09 1.3E-13 107.9 5.2 146 69-216 49-280 (329)
401 3ogk_B Coronatine-insensitive 98.6 2.6E-09 8.8E-14 118.4 -3.7 131 69-200 378-527 (592)
402 3ogk_B Coronatine-insensitive 98.5 7.8E-09 2.7E-13 114.5 -2.8 143 70-215 139-298 (592)
403 3r70_A Aminoglycoside phosphot 98.4 7.1E-07 2.4E-11 90.6 10.9 133 340-488 43-238 (320)
404 3rw6_A Nuclear RNA export fact 98.4 1.2E-07 4.1E-12 92.7 4.1 100 90-192 137-257 (267)
405 4gkh_A Aminoglycoside 3'-phosp 98.4 2.1E-06 7.2E-11 84.7 12.8 136 341-487 31-223 (272)
406 1io0_A Tropomodulin; LRR prote 98.4 1.6E-08 5.6E-13 93.9 -2.9 111 89-199 31-164 (185)
407 3tdw_A Gentamicin resistance p 98.3 3E-06 1E-10 85.3 12.8 136 340-487 25-224 (306)
408 3d1u_A Putative fructosamine-3 98.2 3.3E-06 1.1E-10 84.1 9.9 141 340-486 21-215 (288)
409 2p1m_B Transport inhibitor res 98.2 5.5E-08 1.9E-12 107.6 -3.8 124 91-216 102-241 (594)
410 2p1m_B Transport inhibitor res 98.2 8.9E-08 3E-12 106.0 -2.8 107 92-199 370-494 (594)
411 3ats_A Putative uncharacterize 98.1 4.7E-06 1.6E-10 85.8 9.3 79 340-418 26-121 (357)
412 1io0_A Tropomodulin; LRR prote 98.1 1.8E-07 6.1E-12 86.8 -1.4 108 69-177 36-164 (185)
413 3ovc_A Hygromycin-B 4-O-kinase 98.1 1.2E-05 4.2E-10 82.8 11.9 144 340-488 47-244 (362)
414 4fdw_A Leucine rich hypothetic 98.1 4.5E-06 1.5E-10 87.3 8.6 76 70-149 158-235 (401)
415 2ra8_A Uncharacterized protein 98.1 6.4E-07 2.2E-11 92.2 1.2 144 69-216 139-313 (362)
416 4fdw_A Leucine rich hypothetic 98.0 1.2E-05 4E-10 84.1 9.7 138 70-215 136-276 (401)
417 2q83_A YTAA protein; 2635576, 98.0 3.9E-05 1.3E-09 78.2 12.8 143 340-486 38-251 (346)
418 2olc_A MTR kinase, methylthior 97.9 8.9E-05 3.1E-09 77.4 13.3 74 340-415 36-120 (397)
419 3jr1_A Putative fructosamine-3 97.9 0.0001 3.5E-09 74.0 12.4 140 340-483 42-232 (312)
420 2ra8_A Uncharacterized protein 97.8 1.8E-06 6.1E-11 88.8 -1.5 147 68-216 106-285 (362)
421 3f7w_A Putative fructosamine-3 97.7 0.00022 7.6E-09 70.8 11.6 73 340-416 21-96 (288)
422 2pyw_A Uncharacterized protein 97.6 0.0005 1.7E-08 72.2 13.8 74 457-531 232-313 (420)
423 1zyl_A Hypothetical protein YI 97.5 0.00092 3.2E-08 67.5 13.7 145 341-488 33-224 (328)
424 3feg_A Choline/ethanolamine ki 97.3 0.0011 3.7E-08 68.3 11.7 144 340-487 56-254 (379)
425 3dxq_A Choline/ethanolamine ki 97.2 0.0011 3.6E-08 66.2 9.5 71 340-417 24-95 (301)
426 2ppq_A HSK, HK, homoserine kin 97.2 0.0027 9.2E-08 63.8 12.4 145 340-486 28-216 (322)
427 3csv_A Aminoglycoside phosphot 97.2 0.0014 4.6E-08 66.5 10.0 145 340-488 24-218 (333)
428 3e4g_A ATP synthase subunit S, 97.1 0.00019 6.5E-09 65.0 2.3 81 95-175 62-150 (176)
429 1nw1_A Choline kinase (49.2 KD 97.0 0.0065 2.2E-07 63.8 14.0 72 340-416 79-158 (429)
430 3rfe_A Platelet glycoprotein I 97.0 0.00048 1.6E-08 59.3 4.3 37 141-177 32-68 (130)
431 3c5i_A Choline kinase; choline 96.9 0.0021 7.3E-08 66.1 8.9 73 340-416 39-120 (369)
432 2qg7_A Ethanolamine kinase PV0 96.7 0.014 4.8E-07 61.6 13.4 74 340-417 114-188 (458)
433 3i1a_A Spectinomycin phosphotr 96.6 0.0068 2.3E-07 61.5 10.0 32 457-488 206-237 (339)
434 1pgv_A TMD-1, tropomodulin TMD 96.6 0.00011 3.7E-09 67.9 -3.3 86 89-174 36-136 (197)
435 4fs7_A Uncharacterized protein 96.6 0.0057 1.9E-07 63.5 9.4 53 158-213 156-211 (394)
436 3rfe_A Platelet glycoprotein I 96.6 0.0035 1.2E-07 53.8 6.3 57 73-132 12-69 (130)
437 2yle_A Protein spire homolog 1 96.4 0.036 1.2E-06 51.4 12.3 103 415-533 33-135 (229)
438 1pgv_A TMD-1, tropomodulin TMD 96.3 0.0005 1.7E-08 63.4 -1.0 109 68-177 40-170 (197)
439 4gt6_A Cell surface protein; l 96.2 0.0057 1.9E-07 63.5 6.3 110 85-199 256-370 (394)
440 4fs7_A Uncharacterized protein 96.1 0.0081 2.8E-07 62.3 7.4 138 69-215 230-371 (394)
441 3e4g_A ATP synthase subunit S, 95.9 0.0019 6.4E-08 58.4 1.2 87 111-197 54-150 (176)
442 4h09_A Hypothetical leucine ri 95.9 0.016 5.6E-07 59.5 8.3 125 88-216 211-339 (379)
443 4gt6_A Cell surface protein; l 95.6 0.014 4.7E-07 60.5 6.4 115 95-215 243-362 (394)
444 3mes_A Choline kinase; malaria 95.5 0.073 2.5E-06 55.4 11.5 74 340-417 76-157 (424)
445 3f2s_A CK, chetk-alpha, cholin 95.5 0.12 4E-06 53.4 12.6 143 340-486 58-279 (401)
446 4h09_A Hypothetical leucine ri 95.1 0.068 2.3E-06 54.8 9.8 82 89-172 235-318 (379)
447 2ks1_B Epidermal growth factor 94.1 0.034 1.2E-06 36.9 2.8 31 259-289 11-41 (44)
448 2l2t_A Receptor tyrosine-prote 93.6 0.036 1.2E-06 36.7 2.2 31 259-289 10-40 (44)
449 2k1k_A Ephrin type-A receptor 91.7 0.06 2.1E-06 34.6 1.3 30 256-285 8-37 (38)
450 3g15_A CK, chetk-alpha, cholin 91.1 0.72 2.5E-05 47.5 9.6 29 459-487 246-280 (401)
451 4ann_A ESSB; membrane protein, 87.7 1.2 4E-05 41.2 7.1 116 388-535 43-158 (215)
452 2jwa_A Receptor tyrosine-prote 86.2 0.29 9.8E-06 32.4 1.5 25 261-286 14-38 (44)
453 4ano_A ESSB; membrane protein, 84.1 2.4 8.1E-05 39.3 7.2 115 388-535 48-163 (219)
454 3cxl_A N-chimerin; SH2, RHO-GA 65.1 0.82 2.8E-05 48.1 -1.6 57 340-400 148-214 (463)
455 2klu_A T-cell surface glycopro 64.5 6.1 0.00021 28.3 3.2 21 264-284 12-32 (70)
456 3ls8_A Phosphatidylinositol 3- 53.8 1.1E+02 0.0038 32.8 12.4 47 433-486 453-501 (614)
457 2lz0_A Uncharacterized protein 33.8 56 0.0019 25.7 4.8 44 84-128 10-53 (100)
458 2l34_A TYRO protein tyrosine k 30.6 17 0.00058 22.3 0.9 24 259-282 7-30 (33)
459 2llm_A Amyloid beta A4 protein 33.4 13 0.00044 24.1 0.0 26 257-282 15-40 (43)
460 1cja_A Protein (actin-fragmin 21.7 4.6E+02 0.016 25.7 9.8 79 404-487 156-237 (342)
461 2l8s_A Integrin alpha-1; trans 21.0 59 0.002 22.4 2.3 17 260-276 11-27 (54)
462 2lp1_A C99; alzheimer'S D memb 24.0 24 0.00084 28.3 0.0 25 259-283 30-54 (122)
No 1
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=3.7e-52 Score=422.45 Aligned_cols=249 Identities=24% Similarity=0.372 Sum_probs=204.4
Q ss_pred hcccCcCCceEEEEEEEc------CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILE------DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||+||+|++. +++.||||+++... ...++|.+|+.++.++ +|||||+++|+|.+++..++|||
T Consensus 31 ~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~~~~~~lV~E 109 (308)
T 4gt4_A 31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL-QHPNVVCLLGVVTKDQPLSMIFS 109 (308)
T ss_dssp EEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhC-CCCCCCCcceEEEECCEEEEEEE
Confidence 467999999999999863 46789999997543 3467899999999999 99999999999999999999999
Q ss_pred cCCCCcHHHHhhhcCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEE
Q 006884 411 YMPAGSLFMLLHRNRSD-----------GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCI 479 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki 479 (627)
||++|+|.++|...... ....++|..+++|+.|||.||.|||+++ ||||||||+|||+++++.+||
T Consensus 110 y~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~~Ki 186 (308)
T 4gt4_A 110 YCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKI 186 (308)
T ss_dssp CCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEE
T ss_pred cCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCCCEEE
Confidence 99999999999754211 1246899999999999999999999998 999999999999999999999
Q ss_pred eecccccccCC------CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHH
Q 006884 480 SDVGLAHLINF------PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSV 552 (627)
Q Consensus 480 ~DfG~a~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~ 552 (627)
+|||+|+.... .....||++|||||++.++.|+.++|||||||++|||+| |+.||.+... .+.+..
T Consensus 187 ~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~------~~~~~~- 259 (308)
T 4gt4_A 187 SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN------QDVVEM- 259 (308)
T ss_dssp CCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH------HHHHHH-
T ss_pred CCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH------HHHHHH-
Confidence 99999986532 123457899999999999999999999999999999998 8999976432 122222
Q ss_pred hhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhc
Q 006884 553 VREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQ 608 (627)
Q Consensus 553 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~ 608 (627)
+..+.... ..+++...+.+++.+||+.||++||||.||++.|+.+.
T Consensus 260 i~~~~~~~----------~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 260 IRNRQVLP----------CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp HHTTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred HHcCCCCC----------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 22221111 11223346778899999999999999999999998764
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=5.6e-52 Score=425.09 Aligned_cols=251 Identities=25% Similarity=0.403 Sum_probs=201.5
Q ss_pred hcccCcCCceEEEEEEEc------CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILE------DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||+||+|+++ +++.||||+++... ...++|.+|++++.++ +|||||+++|+|.+.+..++||||
T Consensus 46 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~~~~~~lV~Ey 124 (329)
T 4aoj_A 46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML-QHQHIVRFFGVCTEGRPLLMVFEY 124 (329)
T ss_dssp EEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSEEEEEEC
T ss_pred EEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEEc
Confidence 468999999999999864 47889999997543 2457899999999999 999999999999999999999999
Q ss_pred CCCCcHHHHhhhcCCC----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEee
Q 006884 412 MPAGSLFMLLHRNRSD----------GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISD 481 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~D 481 (627)
+++|+|.++++..... ....++|..+++|+.|+|.||.|||+.+ ||||||||+|||+++++.+||+|
T Consensus 125 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~~Ki~D 201 (329)
T 4aoj_A 125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGD 201 (329)
T ss_dssp CTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECC
T ss_pred CCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCcEEEcc
Confidence 9999999999865321 1346999999999999999999999988 99999999999999999999999
Q ss_pred cccccccCCC------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhh
Q 006884 482 VGLAHLINFP------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVR 554 (627)
Q Consensus 482 fG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~ 554 (627)
||+|+..... ....||+.|||||++.+..|+.++|||||||++|||+| |+.||..... .+.+..+..
T Consensus 202 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~------~~~~~~i~~ 275 (329)
T 4aoj_A 202 FGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN------TEAIDCITQ 275 (329)
T ss_dssp CC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH------HHHHHHHHH
T ss_pred cccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH------HHHHHHHHc
Confidence 9999876332 23457899999999999999999999999999999999 8999975432 222222222
Q ss_pred hcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 555 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
.... . .. .....++.+++.+||+.||++||||+||+++|+.+.+.
T Consensus 276 g~~~-~-------~p---~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 276 GREL-E-------RP---RACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp TCCC-C-------CC---TTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred CCCC-C-------Cc---ccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 1111 0 11 12234567888999999999999999999999998653
No 3
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.2e-52 Score=422.21 Aligned_cols=250 Identities=23% Similarity=0.424 Sum_probs=204.0
Q ss_pred hcccCcCCceEEEEEEEc------CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILE------DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||+||+|++. ++..||||+++... ...++|.+|+++++++ +|||||+++|+|.+++..++||||
T Consensus 18 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~~~~~~lV~Ey 96 (299)
T 4asz_A 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-QHEHIVKFYGVCVEGDPLIMVFEY 96 (299)
T ss_dssp EEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSEEEEEEC
T ss_pred eeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhC-CCCCCccEEEEEeeCCEEEEEEEc
Confidence 478999999999999864 47789999997543 2457899999999999 999999999999999999999999
Q ss_pred CCCCcHHHHhhhcC--------CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecc
Q 006884 412 MPAGSLFMLLHRNR--------SDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVG 483 (627)
Q Consensus 412 ~~~gsL~~~l~~~~--------~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG 483 (627)
+++|+|.++++... ......++|..++.++.|+|.||.|||+++ |+||||||+|||+++++.+||+|||
T Consensus 97 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~Ki~DFG 173 (299)
T 4asz_A 97 MKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKIGDFG 173 (299)
T ss_dssp CTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCS
T ss_pred CCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEEECCcc
Confidence 99999999998642 122457999999999999999999999998 9999999999999999999999999
Q ss_pred cccccCCC------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhc
Q 006884 484 LAHLINFP------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREE 556 (627)
Q Consensus 484 ~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 556 (627)
+|+..... ....||+.|||||++.+..|+.++|||||||++|||+| |+.||.+... .+....+....
T Consensus 174 la~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~------~~~~~~i~~~~ 247 (299)
T 4asz_A 174 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN------NEVIECITQGR 247 (299)
T ss_dssp CHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH------HHHHHHHHHTC
T ss_pred cceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHHHcCC
Confidence 99865332 22347899999999999999999999999999999999 8999986432 22222222211
Q ss_pred ccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006884 557 WTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 557 ~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 609 (627)
.. . .. .....++.+++.+||+.||++||||+||.+.|+++..
T Consensus 248 ~~-~-------~p---~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 248 VL-Q-------RP---RTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp CC-C-------CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CC-C-------CC---ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 11 1 11 1223456788899999999999999999999998864
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-51 Score=415.75 Aligned_cols=249 Identities=29% Similarity=0.465 Sum_probs=198.5
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||+||+|+++ ..||||+++.... ..+.|.+|+++++++ +|||||+++|++. ++..++||||+++|
T Consensus 41 ~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~-~~~~~iVmEy~~gG 116 (307)
T 3omv_A 41 STRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKT-RHVNILLFMGYMT-KDNLAIVTQWCEGS 116 (307)
T ss_dssp EEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEC-SSSCEEEEECCSSC
T ss_pred eeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEE-CCeEEEEEEcCCCC
Confidence 578999999999999976 3699999875433 346799999999999 9999999999875 45789999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~---- 491 (627)
+|.++++... ..++|..++.|+.|+|.||+|||+++ ||||||||+|||+++++.+||+|||+|+.....
T Consensus 117 sL~~~l~~~~----~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 189 (307)
T 3omv_A 117 SLYKHLHVQE----TKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp BHHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred CHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence 9999997542 46999999999999999999999988 999999999999999999999999999876431
Q ss_pred --CCCCCCccccCccccCC---CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhh
Q 006884 492 --TTATRTIGYRAPEVTET---RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVEL 566 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~~---~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 566 (627)
.+..||+.|||||++.+ ..|+.++|||||||++|||+||+.||.+.... ..+...+..... .+.+
T Consensus 190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~------~~~~~~~~~~~~----~p~~ 259 (307)
T 3omv_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR------DQIIFMVGRGYA----SPDL 259 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH------HHHHHHHHTTCC----CCCS
T ss_pred eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH------HHHHHHHhcCCC----CCCc
Confidence 23468999999999853 46899999999999999999999999754321 112222222211 1111
Q ss_pred hcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 567 LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 567 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
.. ....+...+.+++.+||+.+|++||||.||++.|+.++.+
T Consensus 260 ~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 260 SK--LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp TT--SCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred cc--ccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 11 1112334667888999999999999999999999988754
No 5
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.3e-51 Score=419.25 Aligned_cols=260 Identities=25% Similarity=0.348 Sum_probs=198.1
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCC----ceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD----EKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~----~~~lv~e~~~~ 414 (627)
.+.||+|+||+||+|+++ |+.||||++.........++.|+..+.++ +|||||+++++|.+++ ..++||||+++
T Consensus 8 ~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l-~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~ 85 (303)
T 3hmm_A 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVML-RHENILGFIAADNKDNGTWTQLWLVSDYHEH 85 (303)
T ss_dssp EEEEEECSSSEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred EEEEeeCCCeEEEEEEEC-CEEEEEEEECccchhhHHHHHHHHHHhcC-CCCCCCcEEEEEEecCCCceEEEEEecCCCC
Confidence 478999999999999985 89999999975433333344455555667 9999999999998764 47899999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEG-----GAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
|+|.++++.. .++|..+.+++.|++.||+|||+++ .++|+||||||+|||++.++.+||+|||+|+...
T Consensus 86 gsL~~~l~~~------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 159 (303)
T 3hmm_A 86 GSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp CBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred CcHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence 9999999853 4899999999999999999999872 2459999999999999999999999999998764
Q ss_pred CCC--------CCCCCccccCccccCCC------CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCC---------CCHH
Q 006884 490 FPT--------TATRTIGYRAPEVTETR------KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDV---------VDLP 546 (627)
Q Consensus 490 ~~~--------~~~~t~~y~aPE~~~~~------~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~---------~~~~ 546 (627)
... ...||+.|||||++.+. .++.++|||||||++|||+||+.||........ ....
T Consensus 160 ~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~ 239 (303)
T 3hmm_A 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 239 (303)
T ss_dssp TTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHH
T ss_pred CCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHH
Confidence 321 23589999999998764 467899999999999999999888754322111 1111
Q ss_pred HHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 547 RWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 547 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
. ......+.. .++.+.......+....+.+++.+||+.||++||||.||++.|+++.+.+
T Consensus 240 ~-~~~~~~~~~----~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 240 E-MRKVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp H-HHHHHTTSC----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred H-HHHHHhccc----CCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 1 222221111 11111111122456677889999999999999999999999999987653
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2.3e-50 Score=412.52 Aligned_cols=239 Identities=20% Similarity=0.348 Sum_probs=199.7
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
+.||+|+||+||+|+.+ +|+.||||++.... ...+.+.+|+++++.+ +|||||++++++.+++..|+||||+++|+|
T Consensus 80 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L 158 (346)
T 4fih_A 80 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWVVMEFLEGGAL 158 (346)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEECCCTTEEH
T ss_pred EEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEeCCCCCcH
Confidence 67999999999999976 68999999996543 3456688999999999 999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----CC
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TT 493 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~----~~ 493 (627)
.+++.+. .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+..... .+
T Consensus 159 ~~~l~~~------~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~ 229 (346)
T 4fih_A 159 TDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS 229 (346)
T ss_dssp HHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCC
T ss_pred HHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccc
Confidence 9999753 4899999999999999999999998 999999999999999999999999999876432 35
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChH
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVE 573 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 573 (627)
..||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+ ..+....+. ....... ....
T Consensus 230 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~------~~~~~~~i~-~~~~~~~--------~~~~ 294 (346)
T 4fih_A 230 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP------PLKAMKMIR-DNLPPRL--------KNLH 294 (346)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHH-HSSCCCC--------SCGG
T ss_pred cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHH-cCCCCCC--------Cccc
Confidence 679999999999999999999999999999999999999997532 112222222 1111111 1111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 574 EEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 574 ~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
....++.+++.+||..||++|||++|++++
T Consensus 295 ~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 295 KVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 222356678889999999999999999873
No 7
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=9e-50 Score=400.22 Aligned_cols=241 Identities=24% Similarity=0.390 Sum_probs=193.9
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEee----CCceeEEEec
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYS----KDEKLVVYSY 411 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~----~~~~~lv~e~ 411 (627)
+.||+|+||+||+|+++ ++..||+|++..... ..+.|.+|+++++++ +|||||+++++|.+ +...++||||
T Consensus 32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~~~~~lvmEy 110 (290)
T 3fpq_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKCIVLVTEL 110 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEeeccCCCcEEEEEEeC
Confidence 57999999999999976 588999999975432 346789999999999 99999999999875 3457899999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC-CCCeEEeecccccccCC
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ-DLNGCISDVGLAHLINF 490 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~-~~~~ki~DfG~a~~~~~ 490 (627)
+++|+|.+++.+. ..+++..+..++.||+.||+|||+++ ++|+||||||+|||++. ++.+||+|||+|+....
T Consensus 111 ~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 111 MTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp CCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred CCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 9999999999865 35899999999999999999999986 57999999999999985 79999999999986543
Q ss_pred C--CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006884 491 P--TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 491 ~--~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
. .+..||+.|||||++.+ .|+.++|||||||++|||+||+.||.+.. ........ +........++
T Consensus 185 ~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~-----~~~~~~~~-i~~~~~~~~~~----- 252 (290)
T 3fpq_A 185 SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ-----NAAQIYRR-VTSGVKPASFD----- 252 (290)
T ss_dssp TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS-----SHHHHHHH-HTTTCCCGGGG-----
T ss_pred CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----cHHHHHHH-HHcCCCCCCCC-----
Confidence 3 34569999999999865 69999999999999999999999997532 11222222 22211111111
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 569 YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
... ..++.+++.+||+.||++|||++|++++
T Consensus 253 -~~~---~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 253 -KVA---IPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp -GCC---CHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -ccC---CHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 111 1246678889999999999999999763
No 8
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=8.9e-50 Score=407.05 Aligned_cols=243 Identities=20% Similarity=0.230 Sum_probs=199.6
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
.+.||+|+||.||+|+.+ +|+.||||+++.... +.+|+++++.+ +|||||++++++.+++..|+||||++||+|
T Consensus 63 ~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l-~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L 137 (336)
T 4g3f_A 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGL-SSPRIVPLYGAVREGPWVNIFMELLEGGSL 137 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTC-CCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred CcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEeccCCCcH
Confidence 467999999999999975 689999999975432 24688999999 999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC-CeEEeecccccccCCC-----
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL-NGCISDVGLAHLINFP----- 491 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~-~~ki~DfG~a~~~~~~----- 491 (627)
.+++++. ..+++..+..++.|++.||+|||+++ ||||||||+|||++.++ .+||+|||+|+.....
T Consensus 138 ~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~ 209 (336)
T 4g3f_A 138 GQLIKQM-----GCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 209 (336)
T ss_dssp HHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC--------
T ss_pred HHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccc
Confidence 9999865 35999999999999999999999998 99999999999999987 6999999999876432
Q ss_pred ----CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006884 492 ----TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 492 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
....||+.|||||++.+..|+.++|||||||++|||++|+.||......+. . ..+.........
T Consensus 210 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~---~---~~i~~~~~~~~~------ 277 (336)
T 4g3f_A 210 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL---C---LKIASEPPPIRE------ 277 (336)
T ss_dssp ----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC---H---HHHHHSCCGGGG------
T ss_pred eecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH---H---HHHHcCCCCchh------
Confidence 224689999999999999999999999999999999999999986544332 1 112221111000
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006884 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 609 (627)
.... ....+.+++.+||+.||++|||+.|++++|.....
T Consensus 278 ~~~~---~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~ 316 (336)
T 4g3f_A 278 IPPS---CAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQ 316 (336)
T ss_dssp SCTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCcc---CCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence 0111 22356678889999999999999999999887654
No 9
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=7.7e-50 Score=409.31 Aligned_cols=241 Identities=22% Similarity=0.400 Sum_probs=196.1
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||+||+|+.+ +|+.||||++..... ..+.+.+|+++++++ +|||||++++++.+++..|+||||++|
T Consensus 29 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~yiVmEy~~g 107 (350)
T 4b9d_A 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM-KHPNIVQYRESFEENGSLYIVMDYCEG 107 (350)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred eEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHC-CCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence 478999999999999965 689999999975432 346789999999999 999999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
|+|.+++...+ ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+.....
T Consensus 108 g~L~~~i~~~~---~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 181 (350)
T 4b9d_A 108 GDLFKRINAQK---GVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL 181 (350)
T ss_dssp CBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHH
T ss_pred CcHHHHHHHcC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecCCccc
Confidence 99999997543 346789999999999999999999998 999999999999999999999999999877532
Q ss_pred -CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 492 -TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
.+..||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+ ..+.+..+....... . ..
T Consensus 182 ~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~------~~~~~~~i~~~~~~~-~-------~~ 247 (350)
T 4b9d_A 182 ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS------MKNLVLKIISGSFPP-V-------SL 247 (350)
T ss_dssp HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHTCCCC-C-------CT
T ss_pred ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHHcCCCCC-C-------Cc
Confidence 23469999999999999999999999999999999999999997542 233333333332211 0 11
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.. ..++.+++.+||+.||++|||++|++++
T Consensus 248 ~~---s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 248 HY---SYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp TS---CHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cC---CHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11 2356678889999999999999999873
No 10
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=7.8e-50 Score=412.45 Aligned_cols=253 Identities=26% Similarity=0.364 Sum_probs=204.7
Q ss_pred hcccCcCCceEEEEEEEcC------CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeC-CceeEEE
Q 006884 339 AEVLGKGSYGSTYKAILED------GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSK-DEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~-~~~~lv~ 409 (627)
.+.||+|+||+||+|.+.. ++.||||+++.... ..++|.+|++++.++.+|||||+++|+|.+. +..++||
T Consensus 69 ~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~ 148 (353)
T 4ase_A 69 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 148 (353)
T ss_dssp EEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEE
T ss_pred eeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEE
Confidence 5789999999999998653 35799999976432 3467999999999996679999999999765 5689999
Q ss_pred ecCCCCcHHHHhhhcCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeE
Q 006884 410 SYMPAGSLFMLLHRNRS-----------DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGC 478 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~k 478 (627)
|||++|+|.++|+..+. .....++|..++.++.|||.||.|||+++ ||||||||+|||+++++.+|
T Consensus 149 Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~vK 225 (353)
T 4ase_A 149 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVK 225 (353)
T ss_dssp ECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEE
T ss_pred EcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCccCccceeeCCCCCEE
Confidence 99999999999976432 11345899999999999999999999998 99999999999999999999
Q ss_pred EeecccccccCCCC------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHH
Q 006884 479 ISDVGLAHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRS 551 (627)
Q Consensus 479 i~DfG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~ 551 (627)
|+|||+|+...... +..||+.|||||++.+..|+.++|||||||++|||+| |+.||.+.... ..+..
T Consensus 226 i~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~------~~~~~ 299 (353)
T 4ase_A 226 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID------EEFCR 299 (353)
T ss_dssp ECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS------HHHHH
T ss_pred ECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH------HHHHH
Confidence 99999998764432 2347889999999999999999999999999999998 89999864322 12222
Q ss_pred HhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 552 VVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 552 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
.+.++..... . +....++.+++.+||+.||++|||+.||+++|+.+.+.
T Consensus 300 ~i~~g~~~~~-------p---~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 300 RLKEGTRMRA-------P---DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp HHHHTCCCCC-------C---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHcCCCCCC-------C---ccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 2222221111 1 11233567888899999999999999999999998654
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=4.2e-49 Score=413.10 Aligned_cols=240 Identities=20% Similarity=0.347 Sum_probs=199.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
.+.||+|+||.||+|+.+ +|+.||||++.... ...+.+.+|+++++.+ +|||||+++++|.+++..|+|||||+||+
T Consensus 156 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~~~iVmEy~~gG~ 234 (423)
T 4fie_A 156 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWVVMEFLEGGA 234 (423)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred eeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhC-CCCCCCceEEEEEECCEEEEEEeCCCCCc
Confidence 367999999999999976 68999999996543 3456689999999999 99999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----C
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----T 492 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~----~ 492 (627)
|.++++.. .+++..+..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+..... .
T Consensus 235 L~~~i~~~------~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 305 (423)
T 4fie_A 235 LTDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 305 (423)
T ss_dssp HHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBC
T ss_pred HHHHHhcc------CCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCCCcccc
Confidence 99999753 4899999999999999999999998 999999999999999999999999999876432 3
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
+..||+.|||||++.+..|+.++|||||||++|||++|+.||.+.. ..+.+..+. ...... +......
T Consensus 306 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~------~~~~~~~i~-~~~~~~-----~~~~~~~ 373 (423)
T 4fie_A 306 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP------PLKAMKMIR-DNLPPR-----LKNLHKV 373 (423)
T ss_dssp CCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHH-HSCCCC-----CSCTTSS
T ss_pred ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHH-cCCCCC-----CcccccC
Confidence 4569999999999999999999999999999999999999997532 122222222 111111 1111122
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
+ .++.+++.+||..||++|||++|++++
T Consensus 374 s---~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 374 S---PSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp C---HHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred C---HHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 2 355678889999999999999999873
No 12
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=8.7e-49 Score=394.93 Aligned_cols=238 Identities=17% Similarity=0.314 Sum_probs=200.1
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccc----ccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV----AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||+||+|+.+ +++.||||++.+. ....+.+.+|+++++.+ +|||||++++++.+++..|+||||++
T Consensus 37 ~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~yivmEy~~ 115 (311)
T 4aw0_A 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAK 115 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEecCC
Confidence 478999999999999965 6899999999653 23467899999999999 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC---
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF--- 490 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~--- 490 (627)
||+|.+++.+. ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+|+....
T Consensus 116 gG~L~~~i~~~-----~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 116 NGELLKYIRKI-----GSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp TEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 99999999865 35999999999999999999999998 99999999999999999999999999987642
Q ss_pred ---CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006884 491 ---PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 491 ---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
..+..||+.|||||++.+..|+.++||||+||++|||++|+.||.+.+ .......+...... +.
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~------~~~~~~~i~~~~~~---~p---- 254 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN------EGLIFAKIIKLEYD---FP---- 254 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCC---CC----
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHcCCCC---CC----
Confidence 234579999999999999999999999999999999999999997542 22223333322210 11
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.... .++.+++.+||..||++|||++|+...
T Consensus 255 --~~~s---~~~~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 255 --EKFF---PKARDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp --TTCC---HHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred --cccC---HHHHHHHHHHccCCHhHCcChHHHcCC
Confidence 1112 245678889999999999999997543
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.7e-48 Score=384.33 Aligned_cols=237 Identities=21% Similarity=0.367 Sum_probs=186.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||+||+|+.+ +|+.||||++.... ...+.+.+|+++++.+ +||||+++++++.+++..++||||+
T Consensus 18 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~~ivmEy~- 95 (275)
T 3hyh_A 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHPHIIKLYDVIKSKDEIIMVIEYA- 95 (275)
T ss_dssp EEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECC-
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEEEEeCC-
Confidence 478999999999999965 68999999986542 2356799999999999 9999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|.+++.+. ..+++..+..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+|+.....
T Consensus 96 ~g~L~~~l~~~-----~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 96 GNELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp CEEHHHHHHHS-----CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecCCCCc
Confidence 68999999764 35999999999999999999999998 999999999999999999999999999876432
Q ss_pred -CCCCCCccccCccccCCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 492 -TTATRTIGYRAPEVTETRKA-SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
.+..||+.|||||++.+..+ +.++||||+||++|||++|+.||...+ .......+...... + .
T Consensus 168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~------~~~~~~~i~~~~~~---~------p 232 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES------IPVLFKNISNGVYT---L------P 232 (275)
T ss_dssp -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCC---C------C
T ss_pred cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHcCCCC---C------C
Confidence 34679999999999998886 579999999999999999999997532 22223322222110 0 1
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
...+ .++.+++.+||+.||++|||++|++++
T Consensus 233 ~~~s---~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 233 KFLS---PGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp TTSC---HHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred CCCC---HHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 1122 345678889999999999999999873
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=2.5e-48 Score=391.57 Aligned_cols=237 Identities=21% Similarity=0.329 Sum_probs=189.9
Q ss_pred hcccCcCCceEEEEEEEc----CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILE----DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||+||+|+.. .++.||||+++... .....+.+|++++.++ +|||||++++++.+++..++||||
T Consensus 29 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~ivmEy 107 (304)
T 3ubd_A 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV-NHPFIVKLHYAFQTEGKLYLILDF 107 (304)
T ss_dssp EEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCC-CCTTEECEEEEEEETTEEEEEECC
T ss_pred EEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEEEEEc
Confidence 578999999999999853 46789999986542 2334688899999999 999999999999999999999999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC-
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF- 490 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~- 490 (627)
++||+|.+++.+. ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+|+....
T Consensus 108 ~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 108 LRGGDLFTRLSKE-----VMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp CTTCEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred CCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 9999999999865 35999999999999999999999998 99999999999999999999999999986532
Q ss_pred ---CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006884 491 ---PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 491 ---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
..+..||+.|||||++.+..|+.++||||+||++|||++|+.||.+.+ ..+....+......
T Consensus 180 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~------~~~~~~~i~~~~~~--------- 244 (304)
T 3ubd_A 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD------RKETMTMILKAKLG--------- 244 (304)
T ss_dssp -CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCC---------
T ss_pred CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC------HHHHHHHHHcCCCC---------
Confidence 235679999999999999999999999999999999999999997542 22223333222110
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 006884 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKM-----DDVVR 602 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~-----~ev~~ 602 (627)
.....+ .++.+++.+||+.||++|||+ +|+++
T Consensus 245 ~p~~~s---~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 245 MPQFLS---PEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp CCTTSC---HHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred CCCcCC---HHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 011122 345678889999999999985 56665
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=8.4e-47 Score=382.06 Aligned_cols=239 Identities=21% Similarity=0.330 Sum_probs=182.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCc-----------
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDE----------- 404 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~----------- 404 (627)
.+.||+|+||+||+|+.+ +|+.||||+++.... ..+.+.+|+++++++ +|||||++++++.+.+.
T Consensus 10 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~~~~~~~~~~ 88 (299)
T 4g31_A 10 IQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL-EHPGIVRYFNAWLEKNTTEKLQPSSPKV 88 (299)
T ss_dssp EEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEEC----------CE
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEecCccccccccCCCc
Confidence 478999999999999975 689999999865432 346789999999999 99999999999876543
Q ss_pred -eeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecc
Q 006884 405 -KLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVG 483 (627)
Q Consensus 405 -~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG 483 (627)
.++||||+++|+|.+++..... ....++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||
T Consensus 89 ~l~ivmE~~~gg~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl~DFG 163 (299)
T 4g31_A 89 YLYIQMQLCRKENLKDWMNGRCT--IEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFG 163 (299)
T ss_dssp EEEEEEECCCSCCHHHHHHTCCS--GGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCC
T ss_pred EEEEEEecCCCCcHHHHHHhcCC--CChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEEccCc
Confidence 6899999999999999985432 234567788999999999999999998 9999999999999999999999999
Q ss_pred cccccCCC----------------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHH
Q 006884 484 LAHLINFP----------------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPR 547 (627)
Q Consensus 484 ~a~~~~~~----------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~ 547 (627)
+|+..... .+..||+.|||||++.+..|+.++|||||||++|||++ ||.... +...
T Consensus 164 la~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~-----~~~~ 235 (299)
T 4g31_A 164 LVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM-----ERVR 235 (299)
T ss_dssp CC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH-----HHHH
T ss_pred cceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc-----HHHH
Confidence 99876432 12358999999999999999999999999999999996 775311 0011
Q ss_pred HHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 548 WVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 548 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.... ...... . +...+......+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~-~~~~~~----p------~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 236 TLTD-VRNLKF----P------PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHH-HHTTCC----C------HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHH-HhcCCC----C------CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1111 111110 0 011223334567899999999999999999987
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.6e-44 Score=375.77 Aligned_cols=255 Identities=21% Similarity=0.292 Sum_probs=195.1
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEee------CCceeEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYS------KDEKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~------~~~~~lv 408 (627)
.+.||+|+||+||+|+.+ +|+.||||+++.... ..+.+.+|+++++.+ +|||||++++++.. .+..|+|
T Consensus 59 ~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~~~~~~~iv 137 (398)
T 4b99_A 59 IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHF-KHDNIIAIKDILRPTVPYGEFKSVYVV 137 (398)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSSCTTTCCCEEEE
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhc-CCCCcceEeeeeecccccccCCEEEEE
Confidence 478999999999999975 699999999975533 245688999999999 99999999998764 3568999
Q ss_pred EecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 409 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
|||++ |+|.+++... ..+++..+..++.|++.||.|||+++ ||||||||+|||++.++.+||+|||+|+.+
T Consensus 138 mE~~~-g~L~~~i~~~-----~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 138 LDLME-SDLHQIIHSS-----QPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp EECCS-EEHHHHHTSS-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EeCCC-CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeecceeeec
Confidence 99995 6899999754 36999999999999999999999998 999999999999999999999999999865
Q ss_pred CC--------CCCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccc-
Q 006884 489 NF--------PTTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWT- 558 (627)
Q Consensus 489 ~~--------~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~- 558 (627)
.. ..+..||+.|||||++.+. .++.++||||+||++|||++|+.||.+.+.. ..+..+......
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~------~~l~~I~~~~g~p 282 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV------HQLQLIMMVLGTP 282 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH------HHHHHHHHHHCCC
T ss_pred ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHH------HHHHHHHHhcCCC
Confidence 32 2345799999999998775 5699999999999999999999999864321 111111110000
Q ss_pred -ccccc-----------hhhhcC--CCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhcc
Q 006884 559 -AEVFD-----------VELLKY--QDV----EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM--IEQIQQ 609 (627)
Q Consensus 559 -~~~~d-----------~~l~~~--~~~----~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~--L~~~~~ 609 (627)
..... ..+... ... +....++.+++.+||..||++|||++|++++ +.+...
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~ 353 (398)
T 4b99_A 283 SPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHD 353 (398)
T ss_dssp CGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTCC
T ss_pred ChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCCC
Confidence 00000 000000 000 0112356788899999999999999999873 544433
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=6e-44 Score=370.93 Aligned_cols=187 Identities=24% Similarity=0.428 Sum_probs=164.2
Q ss_pred hcccCcCCceEEEEEEEc----CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE----DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||+||+|+.+ .++.||||++... .....+.+|++++..+.+||||+++++++.+.+..++||||+++
T Consensus 26 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~-~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g 104 (361)
T 4f9c_A 26 EDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT-SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEH 104 (361)
T ss_dssp EEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT-SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCC
T ss_pred EEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc-cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCc
Confidence 468999999999999853 3678999998653 34567889999999997899999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC-CCeEEeecccccccCCC--
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD-LNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~-~~~ki~DfG~a~~~~~~-- 491 (627)
|+|.+++. .+++..+..++.|++.||+|||+++ |+||||||+|||++.+ +.+||+|||+|+.....
T Consensus 105 ~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~ 173 (361)
T 4f9c_A 105 ESFLDILN--------SLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI 173 (361)
T ss_dssp CCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSC
T ss_pred ccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccc
Confidence 99999984 3889999999999999999999998 9999999999999877 79999999999754321
Q ss_pred ------------------------------CCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 006884 492 ------------------------------TTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHS 537 (627)
Q Consensus 492 ------------------------------~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~pf~~~ 537 (627)
.+..||+.|+|||++.+. .|+.++||||+||++|||++|+.||...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~ 250 (361)
T 4f9c_A 174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKA 250 (361)
T ss_dssp GGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence 124589999999999775 5899999999999999999999999643
No 18
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=3.6e-43 Score=384.22 Aligned_cols=240 Identities=20% Similarity=0.262 Sum_probs=191.9
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHH---HHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQME---VVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~---~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|+.+ +|+.||||++.+.. .....+..|.. ++..+ +|||||+++++|.+.+..|+|||
T Consensus 194 ~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~-~HP~IV~l~~~f~~~~~lylVmE 272 (689)
T 3v5w_A 194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHTPDKLSFILD 272 (689)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSS-CCTTBCCEEEEEECSSEEEEEEC
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhC-CCCCEeEEEEEEEECCEEEEEEe
Confidence 478999999999999976 68999999996532 23344445544 44444 89999999999999999999999
Q ss_pred cCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC
Q 006884 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF 490 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 490 (627)
|++||+|.+++.+. ..+++..+..++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+|+....
T Consensus 273 y~~GGdL~~~l~~~-----~~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 273 LMNGGDLHYHLSQH-----GVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp CCCSCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred cCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 99999999999865 35999999999999999999999998 99999999999999999999999999987654
Q ss_pred --CCCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006884 491 --PTTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 491 --~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
..+.+||+.|||||++.. ..|+.++||||+||++|||++|+.||.+....+ ............. .
T Consensus 345 ~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~---~~~i~~~i~~~~~---------~ 412 (689)
T 3v5w_A 345 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD---KHEIDRMTLTMAV---------E 412 (689)
T ss_dssp CCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC---HHHHHHHHHHCCC---------C
T ss_pred CCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHhhcCCCC---------C
Confidence 345679999999999964 579999999999999999999999997643322 1111122111110 0
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 006884 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPK-----MDDVVR 602 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs-----~~ev~~ 602 (627)
.....+ .++.+++.+||..||.+|++ ++||.+
T Consensus 413 ~p~~~S---~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 413 LPDSFS---PELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp CCTTSC---HHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred CCccCC---HHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 011122 34567888999999999998 688876
No 19
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.3e-42 Score=357.57 Aligned_cols=265 Identities=28% Similarity=0.525 Sum_probs=223.3
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEeccccc-CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAA-TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
.+.||+|+||.||+|++++++.||||++..... ..+.+.+|++++..+ +||||+++++++...+..++||||+++|+|
T Consensus 44 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 122 (321)
T 2qkw_B 44 KFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC-RHPHLVSLIGFCDERNEMILIYKYMENGNL 122 (321)
T ss_dssp CCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSC-CCTTBCCEEEECCCTTCCEEEEECCTTCBT
T ss_pred cceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcCCCeEEEEEEcCCCCcH
Confidence 367999999999999988899999999875533 456789999999999 899999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC------
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP------ 491 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~------ 491 (627)
.+++..... ....++|..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 123 ~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 198 (321)
T 2qkw_B 123 KRHLYGSDL-PTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLS 198 (321)
T ss_dssp GGGSSSSCC-CSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCB
T ss_pred HHHHhccCC-CccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence 999975432 2346899999999999999999999998 999999999999999999999999999765321
Q ss_pred CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006884 492 TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
....+|+.|+|||++.+..++.++||||||+++|||++|+.||......+......|.............+++.... ..
T Consensus 199 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 277 (321)
T 2qkw_B 199 TVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLAD-KI 277 (321)
T ss_dssp CCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTT-CS
T ss_pred cccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhcc-cc
Confidence 12347889999999988899999999999999999999999998776666667766665544444444444443322 23
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006884 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 609 (627)
..+....+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 278 ~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 278 RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 46777889999999999999999999999999998754
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.1e-42 Score=382.89 Aligned_cols=243 Identities=19% Similarity=0.383 Sum_probs=199.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
.+.||+|+||.||+|+.+ +|+.||+|++.... ...+.+.+|+++++.+ +||||+++++++.+.+..++||||++||+
T Consensus 162 ~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~iv~E~~~gg~ 240 (573)
T 3uto_A 162 HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL-RHPTLVNLHDAFEDDNEMVMIYEFMSGGE 240 (573)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHT-CCTTBCCEEEEEECSSEEEEEEECCCCCB
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEEEEeecCCCc
Confidence 478999999999999976 68999999986543 3456788999999999 99999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC--CCeEEeecccccccCCCC--
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD--LNGCISDVGLAHLINFPT-- 492 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~--~~~ki~DfG~a~~~~~~~-- 492 (627)
|.+++... ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+|+......
T Consensus 241 L~~~i~~~----~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~ 313 (573)
T 3uto_A 241 LFEKVADE----HNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV 313 (573)
T ss_dssp HHHHHTCT----TSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEE
T ss_pred HHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEccCCCce
Confidence 99999643 236899999999999999999999998 9999999999999854 899999999999875432
Q ss_pred -CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006884 493 -TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 493 -~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
+..||+.|||||++.+..|+.++||||+||++|||++|+.||.+.+. ......+...... ++.. ....
T Consensus 314 ~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~------~~~~~~i~~~~~~---~~~~--~~~~ 382 (573)
T 3uto_A 314 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND------DETLRNVKSCDWN---MDDS--AFSG 382 (573)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHHTTCCC---CCSG--GGTT
T ss_pred eeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH------HHHHHHHHhCCCC---CCcc--cccC
Confidence 34689999999999999999999999999999999999999975432 2222222222111 0100 1112
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.+ .++.+++.+||..||++|||++|++++
T Consensus 383 ~s---~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 383 IS---EDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp SC---HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CC---HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 22 345678889999999999999999873
No 21
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1e-42 Score=358.47 Aligned_cols=256 Identities=26% Similarity=0.364 Sum_probs=203.0
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCc----eeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDE----KLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~----~~lv~e~~~~ 414 (627)
.+.||+|+||.||+|+.. ++.||||++.........++.|+.++.++ +||||+++++++..... .++||||+++
T Consensus 29 ~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~ 106 (322)
T 3soc_A 29 LEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGM-KHENILQFIGAEKRGTSVDVDLWLITAFHEK 106 (322)
T ss_dssp EEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred hheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcC-CCCCchhhcceeccCCCCCceEEEEEecCCC
Confidence 478999999999999986 79999999976555556677788888888 89999999999987543 6899999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc----------CCCCeeecCCCCCCeEecCCCCeEEeeccc
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE----------GGAKFTHGNIKSSNVLLTQDLNGCISDVGL 484 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~----------~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~ 484 (627)
|+|.++++.. .+++..+..++.|++.||.|||+. + |+||||||+|||++.++.+||+|||+
T Consensus 107 g~L~~~l~~~------~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~---ivH~Dlkp~Nill~~~~~~kL~DFg~ 177 (322)
T 3soc_A 107 GSLSDFLKAN------VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA---ISHRDIKSKNVLLKNNLTACIADFGL 177 (322)
T ss_dssp CBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE---EECSCCSGGGEEECTTCCEEECCCTT
T ss_pred CCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC---EEeCCCChHhEEECCCCeEEEccCCc
Confidence 9999999753 489999999999999999999998 7 99999999999999999999999999
Q ss_pred ccccCCC------CCCCCCccccCccccCCC-----CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHH-------
Q 006884 485 AHLINFP------TTATRTIGYRAPEVTETR-----KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLP------- 546 (627)
Q Consensus 485 a~~~~~~------~~~~~t~~y~aPE~~~~~-----~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~------- 546 (627)
++..... ....+|+.|+|||++.+. .++.++||||||+++|||++|+.||............
T Consensus 178 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 257 (322)
T 3soc_A 178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHP 257 (322)
T ss_dssp CEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSC
T ss_pred ccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCC
Confidence 9765432 224579999999999763 4567889999999999999999999875443322211
Q ss_pred ---HHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 547 ---RWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 547 ---~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
.+......... ..... ...........+.+++.+||+.||++|||+.|+++.|++++..
T Consensus 258 ~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 258 SLEDMQEVVVHKKK-RPVLR----DYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp CHHHHHHHHTTSCC-CCCCC----GGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred chhhhhhhhhcccC-CCCcc----ccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 11111111111 11111 1111124456688999999999999999999999999998753
No 22
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.5e-42 Score=357.89 Aligned_cols=279 Identities=38% Similarity=0.678 Sum_probs=224.7
Q ss_pred CCCCHHHHHHHH-----hcccCcCCceEEEEEEEcCCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEE
Q 006884 327 FNFDLEDLLRAS-----AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYY 399 (627)
Q Consensus 327 ~~~~~~~l~~~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~ 399 (627)
..+++.++.... .+.||+|+||.||+|+.++++.||||++..... ....+.+|++++..+ +||||+++++++
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~ 96 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFC 96 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTC-CCTTBCCCCEEE
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhc-cCCCccceEEEE
Confidence 345555554443 467999999999999988899999999875432 234689999999999 899999999999
Q ss_pred eeCCceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEE
Q 006884 400 YSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCI 479 (627)
Q Consensus 400 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki 479 (627)
...+..++||||+++|+|.+++..... ....+++..+..++.|++.||.|||+...+.|+||||||+|||++.++.+||
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPE-SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCST-TCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 999999999999999999999986532 3456999999999999999999999992223999999999999999999999
Q ss_pred eecccccccCCC-----CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC--CCCCCCHHHHHHHH
Q 006884 480 SDVGLAHLINFP-----TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSG--HDDVVDLPRWVRSV 552 (627)
Q Consensus 480 ~DfG~a~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~--~~~~~~~~~~~~~~ 552 (627)
+|||+++..... ....||+.|+|||++.+..++.++||||||+++|||++|+.||+... .........|+...
T Consensus 176 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 255 (326)
T 3uim_A 176 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255 (326)
T ss_dssp CCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTT
T ss_pred ccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHH
Confidence 999999876432 22347999999999988889999999999999999999999996321 12233455565555
Q ss_pred hhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhc
Q 006884 553 VREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQ 608 (627)
Q Consensus 553 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~ 608 (627)
..........+.... .....++...+.+++.+||+.+|++|||+.||+++|+...
T Consensus 256 ~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 256 LKEKKLEALVDVDLQ-GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp TSSCCSTTSSCTTCT-TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred hhchhhhhhcChhhc-cccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 555444444444332 2345677888999999999999999999999999998753
No 23
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.7e-41 Score=347.42 Aligned_cols=246 Identities=24% Similarity=0.429 Sum_probs=203.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccc-ccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV-AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
.+.||+|+||.||++... +++.||+|++... ....+.+.+|++++..+ +||||+++++++.+++..++||||+++|+
T Consensus 15 ~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 93 (310)
T 3s95_A 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCL-EHPNVLKFIGVLYKDKRLNFITEYIKGGT 93 (310)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred cceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCcCcccEEEEEecCCeeEEEEEecCCCc
Confidence 478999999999999975 6899999988653 23457799999999999 89999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC----
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT---- 492 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~---- 492 (627)
|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 94 L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (310)
T 3s95_A 94 LRGIIKSMD----SQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166 (310)
T ss_dssp HHHHHHHCC----TTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred HHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence 999998642 46899999999999999999999998 9999999999999999999999999998653221
Q ss_pred --------------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCC---CCHHHHHHHHhhh
Q 006884 493 --------------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDV---VDLPRWVRSVVRE 555 (627)
Q Consensus 493 --------------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~---~~~~~~~~~~~~~ 555 (627)
...||+.|+|||++.+..++.++||||||+++|||++|..||........ ...........
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-- 244 (310)
T 3s95_A 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYC-- 244 (310)
T ss_dssp -------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTC--
T ss_pred ccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccccC--
Confidence 34588999999999999999999999999999999999999875433221 11111111000
Q ss_pred cccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 556 EWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 556 ~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
. ......+.+++.+||+.+|++|||++|+++.|++++..
T Consensus 245 -------------~---~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 245 -------------P---PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp -------------C---TTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -------------C---CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 0 11122467788999999999999999999999998754
No 24
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5.2e-41 Score=336.42 Aligned_cols=248 Identities=22% Similarity=0.403 Sum_probs=207.9
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHH
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 418 (627)
.+.||+|+||.||+|+..+++.||+|++.......+++.+|++++.++ +||||+++++++.+.+..++||||+++|+|.
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (269)
T 4hcu_A 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 93 (269)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCceEEEEEeCCCCcHH
Confidence 478999999999999998899999999987777788899999999999 8999999999999999999999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC-----CCC
Q 006884 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF-----PTT 493 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~-----~~~ 493 (627)
+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.... ...
T Consensus 94 ~~l~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 166 (269)
T 4hcu_A 94 DYLRTQR----GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 166 (269)
T ss_dssp HHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred HHHHhcC----cccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEeccccccccccccccccccC
Confidence 9997542 35899999999999999999999998 99999999999999999999999999986643 223
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
..+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ......+..... ... .
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~------~~~~~~~~~~~~---~~~-----~--- 229 (269)
T 4hcu_A 167 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN------SEVVEDISTGFR---LYK-----P--- 229 (269)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHHHTTCC---CCC-----C---
T ss_pred cccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH------HHHHHHHhcCcc---CCC-----C---
Confidence 446778999999998899999999999999999999 9999975321 122222111100 000 0
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
......+.+++.+||+.+|++|||+.|++++|+++....
T Consensus 230 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~g 268 (269)
T 4hcu_A 230 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESG 268 (269)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHcc
Confidence 111235677888999999999999999999999998764
No 25
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=7.6e-42 Score=349.64 Aligned_cols=255 Identities=27% Similarity=0.427 Sum_probs=197.0
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccC---HHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAAT---KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|+.. ++.||||++...... .+++.+|++++.++ +||||+++++++...+..++||||+++|
T Consensus 42 ~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 119 (309)
T 3p86_A 42 KEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRL-RHPNIVLFMGAVTQPPNLSIVTEYLSRG 119 (309)
T ss_dssp EEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSTTCCEEEEECCTTC
T ss_pred eeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCceEEEEecCCCC
Confidence 478999999999999874 889999998755432 35688999999999 8999999999999999999999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~---- 491 (627)
+|.+++..... ...+++..++.++.|++.||.|||+.+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 120 ~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 196 (309)
T 3p86_A 120 SLYRLLHKSGA--REQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSS 196 (309)
T ss_dssp BHHHHHHSTTH--HHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC------------
T ss_pred cHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCCcccccccccc
Confidence 99999975321 124899999999999999999999986 56999999999999999999999999999765432
Q ss_pred CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006884 492 TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
....+|+.|+|||++.+..++.++||||||+++|||++|+.||..... ................ .
T Consensus 197 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~------~~~~~~~~~~~~~~~~-------~-- 261 (309)
T 3p86_A 197 KSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNP------AQVVAAVGFKCKRLEI-------P-- 261 (309)
T ss_dssp -----CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCH------HHHHHHHHHSCCCCCC-------C--
T ss_pred ccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhcCCCCCC-------C--
Confidence 334589999999999999999999999999999999999999975421 1111111111111100 0
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccccc
Q 006884 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRN 614 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~~~ 614 (627)
......+.+++.+||+.+|++|||++++++.|+.+.......
T Consensus 262 -~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~ 303 (309)
T 3p86_A 262 -RNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP 303 (309)
T ss_dssp -TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-----
T ss_pred -ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCC
Confidence 112235677888999999999999999999999998765443
No 26
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=5.7e-41 Score=351.90 Aligned_cols=252 Identities=26% Similarity=0.416 Sum_probs=204.1
Q ss_pred hcccCcCCceEEEEEEEc--------CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEE
Q 006884 339 AEVLGKGSYGSTYKAILE--------DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv 408 (627)
.+.||+|+||.||+|+.. ++..||||+++.... ..+.+.+|++++..+.+||||+++++++...+..++|
T Consensus 86 ~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv 165 (370)
T 2psq_A 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 165 (370)
T ss_dssp EEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEE
Confidence 478999999999999853 345799999975432 3467899999999998899999999999999999999
Q ss_pred EecCCCCcHHHHhhhcCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCe
Q 006884 409 YSYMPAGSLFMLLHRNRSD-----------GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG 477 (627)
Q Consensus 409 ~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ 477 (627)
|||+++|+|.+++...... ....+++..++.++.|++.||.|||+++ |+||||||+|||++.++.+
T Consensus 166 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~ 242 (370)
T 2psq_A 166 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVM 242 (370)
T ss_dssp EECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCE
T ss_pred EEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEECCCCCE
Confidence 9999999999999865321 1245899999999999999999999998 9999999999999999999
Q ss_pred EEeecccccccCCC------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHH
Q 006884 478 CISDVGLAHLINFP------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVR 550 (627)
Q Consensus 478 ki~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~ 550 (627)
||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .+ ..
T Consensus 243 kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~---~~---~~ 316 (370)
T 2psq_A 243 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---EL---FK 316 (370)
T ss_dssp EECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GH---HH
T ss_pred EEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH---HH---HH
Confidence 99999999865432 12335778999999999999999999999999999999 99999764322 11 11
Q ss_pred HHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 551 SVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 551 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
. +....... ........+.+++.+||+.+|++||++.|+++.|+++...
T Consensus 317 ~-~~~~~~~~----------~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~ 365 (370)
T 2psq_A 317 L-LKEGHRMD----------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 365 (370)
T ss_dssp H-HHTTCCCC----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred H-HhcCCCCC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 1 11111110 0112233577888899999999999999999999998654
No 27
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=3e-40 Score=337.51 Aligned_cols=272 Identities=30% Similarity=0.537 Sum_probs=216.7
Q ss_pred CCCCCHHHHHHHHh-----------cccCcCCceEEEEEEEcCCcEEEEEEecccc-----cCHHHHHHHHHHHHHhccC
Q 006884 326 YFNFDLEDLLRASA-----------EVLGKGSYGSTYKAILEDGTTVVVKRLREVA-----ATKREFEQQMEVVGTIGKH 389 (627)
Q Consensus 326 ~~~~~~~~l~~~~~-----------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~e~~~l~~l~~h 389 (627)
...|.++++..++. +.||+|+||.||+|.. +++.||||++.... ...+.+.+|++++..+ +|
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h 89 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC-QH 89 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHC-CC
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhc-CC
Confidence 35677888877762 6799999999999997 47899999986432 2356789999999999 99
Q ss_pred CceeceeeEEeeCCceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCe
Q 006884 390 SNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNV 469 (627)
Q Consensus 390 ~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NI 469 (627)
|||+++++++...+..++||||+++|+|.+++..... ...+++..+..++.|++.||.|||+.+ |+||||||+||
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Ni 164 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG--TPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANI 164 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGG--CCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHE
Confidence 9999999999999999999999999999999975432 346899999999999999999999998 99999999999
Q ss_pred EecCCCCeEEeecccccccCCC------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCC
Q 006884 470 LLTQDLNGCISDVGLAHLINFP------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV 543 (627)
Q Consensus 470 Ll~~~~~~ki~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~ 543 (627)
+++.++.+||+|||+++..... ....+|+.|+|||++.+ .++.++||||||+++|||++|+.||.........
T Consensus 165 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~ 243 (307)
T 2nru_A 165 LLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL 243 (307)
T ss_dssp EECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBT
T ss_pred EEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHH
Confidence 9999999999999999765432 23457899999998865 5889999999999999999999999865443322
Q ss_pred CHHHHHHHHhhhc-ccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006884 544 DLPRWVRSVVREE-WTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 544 ~~~~~~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 609 (627)
..+........ ...+.++..+ ..........+.+++.+||+.+|.+|||+.++++.|+++..
T Consensus 244 --~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 244 --LDIKEEIEDEEKTIEDYIDKKM--NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp --THHHHHHHTTSCCHHHHSCSSC--SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred --HHHHHHhhhhhhhhhhhccccc--cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 12222111111 1111122211 12235566778899999999999999999999999999864
No 28
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.2e-40 Score=333.57 Aligned_cols=248 Identities=24% Similarity=0.409 Sum_probs=206.4
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHH
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 418 (627)
.+.||+|+||.||++..+++..||+|++.......+++.+|++++.++ +||||+++++++...+..++||||+++++|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (268)
T 3sxs_A 13 LKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKL-SHPKLVKFYGVCSKEYPIYIVTEYISNGCLL 91 (268)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCceEEEEEccCCCcHH
Confidence 478999999999999999888999999987777788899999999999 8999999999999999999999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-----C
Q 006884 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-----T 493 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~-----~ 493 (627)
+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++...... .
T Consensus 92 ~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 164 (268)
T 3sxs_A 92 NYLRSHG----KGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG 164 (268)
T ss_dssp HHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCS
T ss_pred HHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhhhhcccC
Confidence 9997652 35899999999999999999999998 9999999999999999999999999998664332 2
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
..+|+.|+|||++.+..++.++||||||+++|||++ |+.||..... ............ ...+ ..
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~------~~~~~~~~~~~~---~~~~-----~~- 229 (268)
T 3sxs_A 165 TKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN------SEVVLKVSQGHR---LYRP-----HL- 229 (268)
T ss_dssp CCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH------HHHHHHHHTTCC---CCCC-----TT-
T ss_pred CCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh------HHHHHHHHcCCC---CCCC-----Cc-
Confidence 335678999999998889999999999999999999 9999975421 111111111110 0000 11
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
....+.+++.+||+.+|++|||+.|+++.|+.++...
T Consensus 230 --~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 230 --ASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp --SCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred --ChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 1235677888999999999999999999999997653
No 29
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=6.6e-41 Score=340.77 Aligned_cols=240 Identities=24% Similarity=0.363 Sum_probs=198.5
Q ss_pred hcccCcCCceEEEEEEE-cCCcEEEEEEeccc-ccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREV-AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
.+.||+|+||.||+|.. .+++.||||++... ....+.+.+|+.++..+ +||||+++++++...+..++||||+++|+
T Consensus 25 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 103 (297)
T 3fxz_A 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-KNPNIVNYLDSYLVGDELWVVMEYLAGGS 103 (297)
T ss_dssp CEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred eeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcC-CCCCCCeEeEEEEECCEEEEEEECCCCCC
Confidence 36899999999999995 46899999998654 34567789999999999 99999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----C
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----T 492 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~----~ 492 (627)
|.+++... .+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++...... .
T Consensus 104 L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 174 (297)
T 3fxz_A 104 LTDVVTET------CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174 (297)
T ss_dssp HHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred HHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccC
Confidence 99999754 4899999999999999999999998 999999999999999999999999998776432 2
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
...+|+.|+|||++.+..++.++||||||+++|||++|+.||..... ............. .. ...
T Consensus 175 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~~~~~~~~~-~~--------~~~ 239 (297)
T 3fxz_A 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP------LRALYLIATNGTP-EL--------QNP 239 (297)
T ss_dssp CCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHHCSC-CC--------SCG
T ss_pred CccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCCC-CC--------CCc
Confidence 34689999999999999999999999999999999999999975321 1112221111111 00 111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
......+.+++.+||+.||++|||++|++++
T Consensus 240 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 240 EKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 1223456788889999999999999999873
No 30
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2.9e-40 Score=333.49 Aligned_cols=248 Identities=21% Similarity=0.351 Sum_probs=204.7
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHH
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 418 (627)
.+.||+|+||.||++.++++..||+|++.......+++.+|++++..+ +||||+++++++.+.+..++||||+++|+|.
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (283)
T 3gen_A 29 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL-SHEKLVQLYGVCTKQRPIFIITEYMANGCLL 107 (283)
T ss_dssp EEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEEEECCCTTCBHH
T ss_pred HhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcC-CCCCEeeEEEEEecCCCeEEEEeccCCCcHH
Confidence 478999999999999999888999999987777788899999999999 8999999999999999999999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC-----CCC
Q 006884 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF-----PTT 493 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~-----~~~ 493 (627)
+++.... ..+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++.... ...
T Consensus 108 ~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 180 (283)
T 3gen_A 108 NYLREMR----HRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 180 (283)
T ss_dssp HHHHCGG----GCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTS
T ss_pred HHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEccccccccccccccccccC
Confidence 9997642 35899999999999999999999998 99999999999999999999999999986643 223
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
..+|+.|+|||++.+..++.++||||||+++|||++ |+.||..... ......+...... .. .
T Consensus 181 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~------~~~~~~~~~~~~~---~~-----~--- 243 (283)
T 3gen_A 181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN------SETAEHIAQGLRL---YR-----P--- 243 (283)
T ss_dssp TTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCH------HHHHHHHHTTCCC---CC-----C---
T ss_pred CccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccCh------hHHHHHHhcccCC---CC-----C---
Confidence 346778999999998899999999999999999998 9999975431 1111111111100 00 0
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
......+.+++.+||+.+|++|||++|++++|+++...+
T Consensus 244 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e 282 (283)
T 3gen_A 244 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282 (283)
T ss_dssp TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence 111235677889999999999999999999999987654
No 31
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=343.12 Aligned_cols=249 Identities=23% Similarity=0.391 Sum_probs=201.7
Q ss_pred hcccCcCCceEEEEEEEc----CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAILE----DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 412 (627)
.+.||+|+||.||+|.+. .+..||||+++... ...+.+.+|++++..+ +||||+++++++.+.+..++||||+
T Consensus 54 ~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~ 132 (325)
T 3kul_A 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF-DHPNIIRLEGVVTRGRLAMIVTEYM 132 (325)
T ss_dssp EEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECGGGCCEEEEECC
T ss_pred eeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCccEEEeeCC
Confidence 478999999999999974 34569999997542 2356789999999999 8999999999999999999999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT 492 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~ 492 (627)
++|+|.+++... ...+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 133 ~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 205 (325)
T 3kul_A 133 ENGSLDTFLRTH----DGQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205 (325)
T ss_dssp TTCBHHHHHHTT----TTCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred CCCcHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence 999999999754 236899999999999999999999998 9999999999999999999999999998764321
Q ss_pred -------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006884 493 -------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 493 -------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
...+|+.|+|||++.+..++.++||||||+++|||++ |+.||..... ......+......
T Consensus 206 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~------~~~~~~~~~~~~~------ 273 (325)
T 3kul_A 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN------RDVISSVEEGYRL------ 273 (325)
T ss_dssp -CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH------HHHHHHHHTTCCC------
T ss_pred cceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH------HHHHHHHHcCCCC------
Confidence 1234678999999998899999999999999999999 9999975421 1112221111110
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006884 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~ 612 (627)
.........+.+++.+||..+|++|||+.|+++.|+.+....-
T Consensus 274 -----~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 274 -----PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp -----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred -----CCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 0011223457788899999999999999999999999876543
No 32
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=6.7e-41 Score=341.22 Aligned_cols=251 Identities=25% Similarity=0.418 Sum_probs=194.9
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHh-ccCCceeceeeEEeeC----CceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTI-GKHSNVVPVRAYYYSK----DEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~~h~niv~~~~~~~~~----~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+. +++.||||++... ..+.+..|.+++... .+||||+++++++... ...++||||++
T Consensus 13 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~ 89 (301)
T 3q4u_A 13 LECVGKGRYGEVWRGSW-QGENVAVKIFSSR--DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHE 89 (301)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCT
T ss_pred EEeeccCCCcEEEEEEE-CCEEEEEEEeccc--cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhcc
Confidence 47899999999999998 5899999998643 455666777777663 2899999999987653 45789999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeeecCCCCCCeEecCCCCeEEeecccc
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH--------SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA 485 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a 485 (627)
+|+|.++++. ..+++..+.+++.|++.||.||| +.+ |+||||||+|||++.++.+||+|||++
T Consensus 90 ~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 90 MGSLYDYLQL------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp TCBHHHHHTT------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred CCCHHHHHhh------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 9999999964 25899999999999999999999 766 999999999999999999999999999
Q ss_pred cccCCC--------CCCCCCccccCccccCCC------CCCCcchhHHHHHHHHHHHhC----------CCCCCCCCCCC
Q 006884 486 HLINFP--------TTATRTIGYRAPEVTETR------KASQKSDVYSFGVLLLEMLTG----------KAPLQHSGHDD 541 (627)
Q Consensus 486 ~~~~~~--------~~~~~t~~y~aPE~~~~~------~~~~~~Dv~S~Gvvl~el~tg----------~~pf~~~~~~~ 541 (627)
+..... ....+|+.|+|||++.+. .++.++||||||+++|||++| +.||......+
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~ 240 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence 765432 223689999999999876 455799999999999999999 78886543322
Q ss_pred CCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006884 542 VVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607 (627)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~ 607 (627)
. .... ............... ...........+.+++.+||+.+|++|||+.|+++.|+++
T Consensus 241 ~-~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 241 P-SFED-MRKVVCVDQQRPNIP----NRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp C-CHHH-HHHHHTTSCCCCCCC----GGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred c-chhh-hhHHHhccCCCCCCC----hhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 1 1111 112111111111111 1111234566788999999999999999999999999986
No 33
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=3e-40 Score=339.78 Aligned_cols=239 Identities=20% Similarity=0.322 Sum_probs=197.6
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
+.||+|+||.||+|+.+ +|+.||||++.... ...+.+.+|+.++..+ +||||+++++++...+..++||||+++|+|
T Consensus 51 ~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 129 (321)
T 2c30_A 51 VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDY-QHFNVVEMYKSYLVGEELWVLMEFLQGGAL 129 (321)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEECCCCSCBH
T ss_pred EEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEECCEEEEEEecCCCCCH
Confidence 47999999999999976 79999999987543 3567789999999999 999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----CC
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TT 493 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~----~~ 493 (627)
.+++... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... ..
T Consensus 130 ~~~l~~~------~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 200 (321)
T 2c30_A 130 TDIVSQV------RLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS 200 (321)
T ss_dssp HHHHTTC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCC
T ss_pred HHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCcEEEeeeeeeeecccCcccccc
Confidence 9998642 5899999999999999999999998 999999999999999999999999998766432 33
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChH
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVE 573 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 573 (627)
..||+.|+|||++.+..++.++||||||+++|||++|+.||..... ......+. ....... ....
T Consensus 201 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~------~~~~~~~~-~~~~~~~--------~~~~ 265 (321)
T 2c30_A 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP------VQAMKRLR-DSPPPKL--------KNSH 265 (321)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHH-HSSCCCC--------TTGG
T ss_pred ccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHh-cCCCCCc--------Cccc
Confidence 4689999999999999999999999999999999999999975321 11122111 1111110 0011
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 574 EEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 574 ~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.....+.+++.+||+.||++|||++|++++
T Consensus 266 ~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 266 KVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 122356778889999999999999999875
No 34
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=3.3e-40 Score=339.98 Aligned_cols=238 Identities=18% Similarity=0.315 Sum_probs=197.5
Q ss_pred hcccCcCCceEEEEEEE-cCCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||+|+. .+|+.||||++..... ..+.+.+|++++..+ +||||+++++++...+..++||||+++
T Consensus 20 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e~~~~ 98 (328)
T 3fe3_A 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL-NHPNIVKLFEVIETEKTLYLIMEYASG 98 (328)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCEEEEEEECCCC
Confidence 47899999999999997 4799999999976533 245688999999999 899999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 99 ~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 170 (328)
T 3fe3_A 99 GEVFDYLVAH-----GRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL 170 (328)
T ss_dssp CBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGG
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcc
Confidence 9999999765 35899999999999999999999998 999999999999999999999999999866433
Q ss_pred CCCCCCccccCccccCCCCCC-CcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 492 TTATRTIGYRAPEVTETRKAS-QKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~~~~~-~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
....||+.|+|||++.+..++ .++|||||||++|||++|+.||.... .......+....... ..
T Consensus 171 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~i~~~~~~~---------p~ 235 (328)
T 3fe3_A 171 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN------LKELRERVLRGKYRI---------PF 235 (328)
T ss_dssp GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCCC---------CT
T ss_pred ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCCC---------CC
Confidence 345689999999999888775 78999999999999999999997542 222222222221110 00
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
. ....+.+++.+||..||.+|||++|++++
T Consensus 236 ~---~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 236 Y---MSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp T---SCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred C---CCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1 12346678889999999999999999874
No 35
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.8e-40 Score=357.81 Aligned_cols=247 Identities=26% Similarity=0.469 Sum_probs=205.4
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHH
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 418 (627)
.+.||+|+||.||+|.++++..||||+++......+.|.+|++++..+ +||||+++++++. .+..++||||+++|+|.
T Consensus 193 ~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~ 270 (454)
T 1qcf_A 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVKLHAVVT-KEPIYIITEFMAKGSLL 270 (454)
T ss_dssp EEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTC-CCTTBCCEEEEEC-SSSCEEEECCCTTCBHH
T ss_pred EEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhC-CCCCEeeEEEEEe-CCccEEEEeecCCCcHH
Confidence 478999999999999998889999999987767788999999999999 9999999999986 66789999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC-----CC
Q 006884 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-----TT 493 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-----~~ 493 (627)
++++... ...+++..++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 271 ~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~ 344 (454)
T 1qcf_A 271 DFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 344 (454)
T ss_dssp HHHHSHH---HHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCS
T ss_pred HHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCC
Confidence 9997542 125789999999999999999999998 999999999999999999999999999876432 23
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
..+++.|+|||++....++.++||||||+++|||++ |+.||..... .+....+...... ...
T Consensus 345 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~------~~~~~~i~~~~~~-----------~~~ 407 (454)
T 1qcf_A 345 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN------PEVIRALERGYRM-----------PRP 407 (454)
T ss_dssp SSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH------HHHHHHHHHTCCC-----------CCC
T ss_pred CcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHcCCCC-----------CCC
Confidence 345778999999998899999999999999999999 9999975421 1222222111110 001
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
......+.+++.+||+.+|++|||+++|++.|+++...
T Consensus 408 ~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 408 ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 12234577888999999999999999999999998654
No 36
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=4.1e-40 Score=340.19 Aligned_cols=252 Identities=16% Similarity=0.200 Sum_probs=203.7
Q ss_pred hcccCcCCceEEEEEEE-cCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
.+.||+|+||.||+|+. .+++.||||++.... ..+.+.+|++++..+.+||||+++++++...+..++||||+ +++|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L 91 (330)
T 2izr_A 14 GKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSL 91 (330)
T ss_dssp EEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCH
Confidence 47899999999999996 468999999986542 33468899999999989999999999999999999999999 9999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC-----eEEeecccccccCCC-
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN-----GCISDVGLAHLINFP- 491 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~-----~ki~DfG~a~~~~~~- 491 (627)
.+++... ...+++..++.++.|++.||.|||+.+ |+||||||+|||++.++. +||+|||+++.....
T Consensus 92 ~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~ 164 (330)
T 2izr_A 92 EDLFDLC----DRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE 164 (330)
T ss_dssp HHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTT
T ss_pred HHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCC
Confidence 9999864 246999999999999999999999998 999999999999998887 999999999865332
Q ss_pred ----------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccc
Q 006884 492 ----------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEV 561 (627)
Q Consensus 492 ----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (627)
....||+.|+|||++.+..++.++||||||+++|||++|+.||......+ .......+.......
T Consensus 165 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~---~~~~~~~i~~~~~~~-- 239 (330)
T 2izr_A 165 TKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADT---LKERYQKIGDTKRAT-- 239 (330)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSS---HHHHHHHHHHHHHHS--
T ss_pred CCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccccc---HHHHHHHHHhhhccC--
Confidence 23458999999999999999999999999999999999999998754332 222222221111000
Q ss_pred cchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 562 FDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 562 ~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
..... ....+ ++.+++..||+.+|.+||++++|.+.|+++...
T Consensus 240 -~~~~~-~~~~p----~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~ 282 (330)
T 2izr_A 240 -PIEVL-CENFP----EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 282 (330)
T ss_dssp -CHHHH-TTTCH----HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred -CHHHH-hccCh----HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence 00000 01111 677888999999999999999999999988644
No 37
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=4.6e-40 Score=354.04 Aligned_cols=248 Identities=25% Similarity=0.426 Sum_probs=203.9
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCC-ceeEEEecCCCCcH
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD-EKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~-~~~lv~e~~~~gsL 417 (627)
.+.||+|+||.||+|.++ ++.||||+++... ..+.|.+|++++..+ +||||+++++++...+ ..++||||+++|+|
T Consensus 198 ~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L 274 (450)
T 1k9a_A 198 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 274 (450)
T ss_dssp EEEEEECSSEEEEEEEET-TEEEEEEEESSCT-TSHHHHHHHHHHHTC-CCTTBCCEEEEEECTTSCEEEEEECCTTCBH
T ss_pred EeeecCcCCeeEEEEEec-CCeEEEEEeCCch-HHHHHHHHHHHHHhc-cCCCEEEEEEEEEcCCCceEEEEEecCCCcH
Confidence 478999999999999986 7899999997643 557799999999999 9999999999987765 68999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC-CCCCC
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-TTATR 496 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-~~~~~ 496 (627)
.+++.... ...+++..++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....+
T Consensus 275 ~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 348 (450)
T 1k9a_A 275 VDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL 348 (450)
T ss_dssp HHHHHHHC---TTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC------CC
T ss_pred HHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCCC
Confidence 99998653 234799999999999999999999998 999999999999999999999999999865432 23356
Q ss_pred CccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHH
Q 006884 497 TIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEE 575 (627)
Q Consensus 497 t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 575 (627)
++.|+|||++.+..++.++||||||+++|||++ |+.||......+ +... +....... .....
T Consensus 349 ~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~---~~~~----i~~~~~~~----------~p~~~ 411 (450)
T 1k9a_A 349 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVPR----VEKGYKMD----------APDGC 411 (450)
T ss_dssp CTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT---HHHH----HHTTCCCC----------CCTTC
T ss_pred CcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHH----HHcCCCCC----------CCCcC
Confidence 788999999999999999999999999999998 999998654332 2111 11111100 01122
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006884 576 MVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 576 ~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~ 612 (627)
...+.+++.+||+.+|++|||+.++++.|+++...++
T Consensus 412 ~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~~l 448 (450)
T 1k9a_A 412 PPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHEL 448 (450)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHhhc
Confidence 3466788889999999999999999999999987654
No 38
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2.9e-40 Score=346.79 Aligned_cols=247 Identities=22% Similarity=0.443 Sum_probs=192.6
Q ss_pred hcccCcCCceEEEEEEEc----CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAILE----DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 412 (627)
.+.||+|+||.||+|+.+ ++..||||+++... ...++|.+|++++..+ +||||+++++++...+..++||||+
T Consensus 50 ~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 128 (373)
T 2qol_A 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYM 128 (373)
T ss_dssp CEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSCEEEEECC
T ss_pred eeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCceEEEEeCC
Confidence 478999999999999865 56789999987542 2346799999999999 9999999999999999999999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT 492 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~ 492 (627)
++|+|.++++.. ...+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 129 ~~~sL~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 201 (373)
T 2qol_A 129 ENGSLDSFLRKH----DAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201 (373)
T ss_dssp TTCBHHHHHHTT----TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred CCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence 999999999754 246899999999999999999999998 9999999999999999999999999998764322
Q ss_pred C-------CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006884 493 T-------ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 493 ~-------~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
. ..+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ......+......
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~------~~~~~~i~~~~~~------ 269 (373)
T 2qol_A 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN------QDVIKAVDEGYRL------ 269 (373)
T ss_dssp ------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH------HHHHHHHHTTEEC------
T ss_pred ccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHcCCCC------
Confidence 1 123568999999999999999999999999999998 9999975421 1111111111100
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
.........+.+++.+||+.+|++||++.++++.|+++...
T Consensus 270 -----~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 270 -----PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp -----CCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -----CCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 01112234677889999999999999999999999998643
No 39
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=9.6e-40 Score=326.62 Aligned_cols=248 Identities=22% Similarity=0.387 Sum_probs=207.2
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHH
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 418 (627)
.+.||+|+||.||++...+++.||+|++.......+.+.+|++++..+ +||||+++++++...+..++||||+++++|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (267)
T 3t9t_A 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPICLVTEFMEHGCLS 91 (267)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSCEEEECCCTTCBHH
T ss_pred eeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCeEEEEeCCCCCcHH
Confidence 478999999999999998889999999987766778899999999999 8999999999999999999999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC-----CCC
Q 006884 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF-----PTT 493 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~-----~~~ 493 (627)
+++.... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.... ...
T Consensus 92 ~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 164 (267)
T 3t9t_A 92 DYLRTQR----GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 164 (267)
T ss_dssp HHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred HHHhhCc----ccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEccccccccccccccccccc
Confidence 9997642 35899999999999999999999998 99999999999999999999999999986533 123
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
..+++.|+|||++.+..++.++||||||+++|||++ |+.||.... .......+.... .. .. ..
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~------~~~~~~~i~~~~-~~--~~-----~~-- 228 (267)
T 3t9t_A 165 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS------NSEVVEDISTGF-RL--YK-----PR-- 228 (267)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHHHTTC-CC--CC-----CT--
T ss_pred ccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCC------HHHHHHHHhcCC-cC--CC-----Cc--
Confidence 346778999999998899999999999999999999 899997532 112222221111 00 00 01
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
.....+.+++.+||+.+|++||++.++++.|+++....
T Consensus 229 -~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (267)
T 3t9t_A 229 -LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESG 266 (267)
T ss_dssp -TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred -cCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 11235677888999999999999999999999997654
No 40
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2.6e-40 Score=360.05 Aligned_cols=248 Identities=25% Similarity=0.397 Sum_probs=206.9
Q ss_pred hcccCcCCceEEEEEEEcC-CcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 339 AEVLGKGSYGSTYKAILED-GTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
.+.||+|+||.||+|+++. +..||||+++......++|.+|++++.++ +||||+++++++...+..++||||+++|+|
T Consensus 225 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~E~~~~g~L 303 (495)
T 1opk_A 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNL 303 (495)
T ss_dssp EEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred eeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhc-CCCCEeeEEEEEecCCcEEEEEEccCCCCH
Confidence 4789999999999999874 88999999987666788999999999999 999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-----
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT----- 492 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~----- 492 (627)
.+++.... ...+++..++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 304 ~~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~ 377 (495)
T 1opk_A 304 LDYLRECN---RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 377 (495)
T ss_dssp HHHHHHSC---TTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCT
T ss_pred HHHHHhcC---cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceeccCCceeecC
Confidence 99998643 245899999999999999999999998 9999999999999999999999999998764321
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006884 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
...+++.|+|||++.+..++.++||||||+++|||++ |+.||...... .+... +....... ..
T Consensus 378 ~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~---~~~~~----~~~~~~~~-------~~-- 441 (495)
T 1opk_A 378 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---QVYEL----LEKDYRME-------RP-- 441 (495)
T ss_dssp TCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GHHHH----HHTTCCCC-------CC--
T ss_pred CCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH---HHHHH----HHcCCCCC-------CC--
Confidence 2234678999999998899999999999999999999 99999765322 11111 11111100 01
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
......+.+++.+||+.+|++|||+.++++.|+.+...
T Consensus 442 -~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 442 -EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp -TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred -CCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 12234567788999999999999999999999998643
No 41
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=8.1e-41 Score=351.85 Aligned_cols=247 Identities=23% Similarity=0.375 Sum_probs=201.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|+++ +++.||||+++.... ..++|.+|++++..+ +||||+++++++...+..++||||+++|
T Consensus 119 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~g 197 (377)
T 3cbl_A 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIYIVMELVQGG 197 (377)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTC-CCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred eeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEecCCCcEEEEEcCCCC
Confidence 478999999999999986 689999999875422 234688999999999 9999999999999999999999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC---
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT--- 492 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~--- 492 (627)
+|.+++.... ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 198 ~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~ 270 (377)
T 3cbl_A 198 DFLTFLRTEG----ARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAA 270 (377)
T ss_dssp BHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEEC
T ss_pred CHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceecCCCceee
Confidence 9999998642 35899999999999999999999998 9999999999999999999999999998654321
Q ss_pred ---CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006884 493 ---TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 493 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
...+++.|+|||++.+..++.++||||||+++|||++ |+.||...... .+...+....... .
T Consensus 271 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~-------~~~~~~~~~~~~~-------~ 336 (377)
T 3cbl_A 271 SGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ-------QTREFVEKGGRLP-------C 336 (377)
T ss_dssp CSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH-------HHHHHHHTTCCCC-------C
T ss_pred cCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHcCCCCC-------C
Confidence 1224667999999998899999999999999999998 99999754311 1111121111100 0
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 569 YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
. ......+.+++.+||+.+|++|||++++++.|++++..
T Consensus 337 ~---~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 337 P---ELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp C---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred C---CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 1 11223567788999999999999999999999998653
No 42
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=342.86 Aligned_cols=254 Identities=27% Similarity=0.381 Sum_probs=205.6
Q ss_pred hcccCcCCceEEEEEEEc--------CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEE
Q 006884 339 AEVLGKGSYGSTYKAILE--------DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv 408 (627)
.+.||+|+||.||+|+.. .+..||||+++.... ..+.+.+|++++..+.+||||+++++++...+..++|
T Consensus 74 ~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv 153 (382)
T 3tt0_A 74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVI 153 (382)
T ss_dssp EEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEE
Confidence 478999999999999853 235799999976532 3367889999999998999999999999999999999
Q ss_pred EecCCCCcHHHHhhhcCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCe
Q 006884 409 YSYMPAGSLFMLLHRNRSD-----------GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG 477 (627)
Q Consensus 409 ~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ 477 (627)
|||+++|+|.+++...... ....+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+
T Consensus 154 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~ 230 (382)
T 3tt0_A 154 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVM 230 (382)
T ss_dssp EECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCE
T ss_pred EEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEEEcCCCcE
Confidence 9999999999999865421 1245899999999999999999999998 9999999999999999999
Q ss_pred EEeecccccccCCC------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHH
Q 006884 478 CISDVGLAHLINFP------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVR 550 (627)
Q Consensus 478 ki~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~ 550 (627)
||+|||+++..... ....+|+.|+|||++.+..++.++||||||+++|||++ |+.||.... ......
T Consensus 231 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~------~~~~~~ 304 (382)
T 3tt0_A 231 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------VEELFK 304 (382)
T ss_dssp EECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------HHHHHH
T ss_pred EEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHH
Confidence 99999999876432 22345788999999999999999999999999999999 999997542 122222
Q ss_pred HHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006884 551 SVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 551 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~ 612 (627)
.+. ....... . .....++.+++.+||+.+|++|||++|+++.|+.+.....
T Consensus 305 ~~~-~~~~~~~-------~---~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 355 (382)
T 3tt0_A 305 LLK-EGHRMDK-------P---SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 355 (382)
T ss_dssp HHH-TTCCCCC-------C---SSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred HHH-cCCCCCC-------C---ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence 221 1111110 0 1122356778889999999999999999999999975543
No 43
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.4e-40 Score=339.41 Aligned_cols=239 Identities=18% Similarity=0.340 Sum_probs=191.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|+.. +|+.||||++..... ..+.+.+|++++..+ +||||+++++++...+..++||||+++|
T Consensus 15 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~~lv~E~~~gg 93 (347)
T 3zgw_A 15 HETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNL-RHQHICQLYHVLETANKIFMVLEYCPGG 93 (347)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred EEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhC-CCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence 478999999999999964 789999999865432 235688999999999 8999999999999999999999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~---- 491 (627)
+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 94 ~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~ 165 (347)
T 3zgw_A 94 ELFDYIISQ-----DRLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYH 165 (347)
T ss_dssp BHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC--------
T ss_pred CHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCcc
Confidence 999999764 35899999999999999999999998 999999999999999999999999998765432
Q ss_pred -CCCCCCccccCccccCCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 492 -TTATRTIGYRAPEVTETRKA-SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
.+..||+.|+|||++.+..+ +.++|||||||++|||++|+.||.... .......+....... .
T Consensus 166 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~------~~~~~~~i~~~~~~~---------p 230 (347)
T 3zgw_A 166 LQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN------VMALYKKIMRGKYDV---------P 230 (347)
T ss_dssp ------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCCC---------C
T ss_pred ccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHcCCCCC---------C
Confidence 23458999999999988776 899999999999999999999997532 222222222221110 0
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMI 604 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L 604 (627)
.. ....+.+++.+||+.||++|||++|++++-
T Consensus 231 ~~---~s~~~~~li~~~L~~dP~~Rps~~eil~hp 262 (347)
T 3zgw_A 231 KW---LSPSSILLLQQMLQVDPKKRISMKNLLNHP 262 (347)
T ss_dssp TT---CCHHHHHHHHHHTCSSGGGSCCHHHHHTCH
T ss_pred CC---CCHHHHHHHHHHcccCHhHCcCHHHHhcCc
Confidence 11 123456788899999999999999999853
No 44
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-40 Score=338.72 Aligned_cols=244 Identities=18% Similarity=0.338 Sum_probs=200.3
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
.+.||+|+||.||++..+ +++.||+|.+.........+.+|++++..+ +||||+++++++.+.+..++||||+++|+|
T Consensus 10 ~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L 88 (321)
T 1tki_A 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIA-RHRNILHLHESFESMEELVMIFEFISGLDI 88 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHS-CCTTBCCEEEEEEETTEEEEEECCCCCCBH
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhC-CCCCCCeEeEEEecCCEEEEEEEeCCCCCH
Confidence 467999999999999976 588999999876555566789999999999 999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC--CCCeEEeecccccccCCCC---
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ--DLNGCISDVGLAHLINFPT--- 492 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~--~~~~ki~DfG~a~~~~~~~--- 492 (627)
.+++... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++. ++.+||+|||+++......
T Consensus 89 ~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 161 (321)
T 1tki_A 89 FERINTS----AFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFR 161 (321)
T ss_dssp HHHHTSS----SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEE
T ss_pred HHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccc
Confidence 9999753 235899999999999999999999998 999999999999987 7899999999998775433
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
...+|+.|+|||++.+..++.++||||||+++|||++|+.||.... .......+...... ++... ..
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~i~~~~~~---~~~~~--~~-- 228 (321)
T 1tki_A 162 LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET------NQQIIENIMNAEYT---FDEEA--FK-- 228 (321)
T ss_dssp EEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHTCCC---CCHHH--HT--
T ss_pred cccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCC------HHHHHHHHHcCCCC---CChhh--hc--
Confidence 2347899999999998889999999999999999999999997542 12222222222111 11100 01
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMI 604 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L 604 (627)
....++.+++.+||..||++|||+.|++++-
T Consensus 229 -~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp 259 (321)
T 1tki_A 229 -EISIEAMDFVDRLLVKERKSRMTASEALQHP 259 (321)
T ss_dssp -TSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred -cCCHHHHHHHHHHcCCChhHCcCHHHHhcCh
Confidence 1123567888899999999999999999843
No 45
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=6e-40 Score=333.67 Aligned_cols=253 Identities=15% Similarity=0.183 Sum_probs=203.3
Q ss_pred hcccCcCCceEEEEEEE-cCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
.+.||+|+||.||+|.. .+++.||||++... ...+.+.+|++++..+.+|+|++.+++++......++||||+ +++|
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L 92 (298)
T 1csn_A 15 GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR-SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSL 92 (298)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEECC-TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeccC-CccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCH
Confidence 47899999999999996 47899999998643 234467889999999989999999999999999999999999 9999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC-----eEEeecccccccCCC-
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN-----GCISDVGLAHLINFP- 491 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~-----~ki~DfG~a~~~~~~- 491 (627)
.+++... +..+++..+..++.|++.||.|||+++ |+||||||+||+++.++. +||+|||+++.....
T Consensus 93 ~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~ 165 (298)
T 1csn_A 93 EDLLDLC----GRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV 165 (298)
T ss_dssp HHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred HHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccc
Confidence 9999864 235899999999999999999999998 999999999999987776 999999999876432
Q ss_pred ----------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccc
Q 006884 492 ----------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEV 561 (627)
Q Consensus 492 ----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (627)
....+|+.|+|||++.+..++.++||||||+++|||++|+.||......... .....+........
T Consensus 166 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~---~~~~~~~~~~~~~~- 241 (298)
T 1csn_A 166 TKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNK---QKYERIGEKKQSTP- 241 (298)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHH---HHHHHHHHHHHHSC-
T ss_pred ccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccH---HHHHHHHhhccCcc-
Confidence 2335789999999999999999999999999999999999999875433221 11111111110000
Q ss_pred cchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 562 FDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 562 ~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
.... .. .....+.+++.+||+.+|++||++++|++.|+++...
T Consensus 242 -~~~~--~~---~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~ 284 (298)
T 1csn_A 242 -LREL--CA---GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 284 (298)
T ss_dssp -HHHH--TT---TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred -HHHH--Hh---hCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence 0000 01 1224567888899999999999999999999998654
No 46
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.4e-40 Score=339.58 Aligned_cols=257 Identities=25% Similarity=0.391 Sum_probs=196.1
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHh-ccCCceeceeeEEeeC----CceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTI-GKHSNVVPVRAYYYSK----DEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~~h~niv~~~~~~~~~----~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.. ++.||||++... ....+..|.+++... .+||||+++++++... ...++||||++
T Consensus 42 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 118 (337)
T 3mdy_A 42 VKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT--EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHE 118 (337)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEEEGG--GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCT
T ss_pred EeEeecCCCeEEEEEEEC-CceEEEEEEecc--ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccC
Confidence 578999999999999986 899999998643 334445555555443 2899999999999887 67899999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEG-----GAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
+|+|.++++.. .+++..+..++.|++.||.|||+.+ .+.|+||||||+|||++.++.+||+|||+++..
T Consensus 119 ~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 192 (337)
T 3mdy_A 119 NGSLYDYLKST------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKF 192 (337)
T ss_dssp TCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred CCcHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceee
Confidence 99999999753 4899999999999999999999981 112999999999999999999999999999765
Q ss_pred CCC--------CCCCCCccccCccccCCCCCCCc------chhHHHHHHHHHHHhC----------CCCCCCCCCCCCCC
Q 006884 489 NFP--------TTATRTIGYRAPEVTETRKASQK------SDVYSFGVLLLEMLTG----------KAPLQHSGHDDVVD 544 (627)
Q Consensus 489 ~~~--------~~~~~t~~y~aPE~~~~~~~~~~------~Dv~S~Gvvl~el~tg----------~~pf~~~~~~~~~~ 544 (627)
... ....||+.|+|||++.+..+..+ +||||||+++|||++| +.||........ .
T Consensus 193 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~-~ 271 (337)
T 3mdy_A 193 ISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDP-S 271 (337)
T ss_dssp C---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC-C
T ss_pred ccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCC-c
Confidence 332 23468999999999988776665 9999999999999999 556654322211 1
Q ss_pred HHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 545 LPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
... .............+. ......+....+.+++.+||+.||++|||+.|++++|+.+.+.
T Consensus 272 ~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 332 (337)
T 3mdy_A 272 YED-MREIVCIKKLRPSFP----NRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332 (337)
T ss_dssp HHH-HHHHHTTSCCCCCCC----GGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred hhh-hHHHHhhhccCcccc----ccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence 111 111111111111111 1111235667788999999999999999999999999998764
No 47
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.9e-40 Score=343.86 Aligned_cols=251 Identities=24% Similarity=0.350 Sum_probs=201.8
Q ss_pred hcccCcCCceEEEEEEEc------CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILE------DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|++. +++.||||+++... ....++.+|+.++..+ +||||+++++++......++|||
T Consensus 76 ~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e 154 (367)
T 3l9p_A 76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIGVSLQSLPRFILLE 154 (367)
T ss_dssp EEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCCCEEEEE
Confidence 478999999999999953 46689999986542 2345788999999999 99999999999999999999999
Q ss_pred cCCCCcHHHHhhhcCCC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC---CeEEeecccc
Q 006884 411 YMPAGSLFMLLHRNRSD--GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL---NGCISDVGLA 485 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~---~~ki~DfG~a 485 (627)
|+++|+|.+++...+.. ....+++..++.++.|++.||.|||+.+ |+||||||+|||++.++ .+||+|||++
T Consensus 155 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~DFG~a 231 (367)
T 3l9p_A 155 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 231 (367)
T ss_dssp CCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECCCHHH
T ss_pred eCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEECCCccc
Confidence 99999999999875421 2245899999999999999999999998 99999999999999554 5999999999
Q ss_pred cccC------CCCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006884 486 HLIN------FPTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 486 ~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
+... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... ......+......
T Consensus 232 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~------~~~~~~i~~~~~~ 305 (367)
T 3l9p_A 232 RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN------QEVLEFVTSGGRM 305 (367)
T ss_dssp HHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH------HHHHHHHHTTCCC
T ss_pred cccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHcCCCC
Confidence 7542 1223456889999999998999999999999999999998 9999975421 1222222211110
Q ss_pred ccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 559 AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 559 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
. ........+.+++.+||+.+|++|||+.+|++.|+.+...
T Consensus 306 -~----------~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 306 -D----------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp -C----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -C----------CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 0 0011223567888999999999999999999999998654
No 48
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.4e-39 Score=342.64 Aligned_cols=245 Identities=20% Similarity=0.299 Sum_probs=195.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccC----HHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAAT----KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~----~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+++.+ +++.||+|+++..... .+.+..|..++..+.+||||+++++++.+.+..++||||++
T Consensus 57 ~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~ 136 (396)
T 4dc2_A 57 LRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 136 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCC
Confidence 478999999999999976 5788999999765322 23578889999888799999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC---
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF--- 490 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~--- 490 (627)
+|+|..++.+. ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 137 gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~ 208 (396)
T 4dc2_A 137 GGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD 208 (396)
T ss_dssp TCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeeecccCCC
Confidence 99999999865 35899999999999999999999998 99999999999999999999999999986322
Q ss_pred -CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCC--CCHHHHHHHHhhhcccccccchhhh
Q 006884 491 -PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDV--VDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 491 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
..+..||+.|+|||++.+..++.++|||||||++|||++|+.||......+. .................
T Consensus 209 ~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~-------- 280 (396)
T 4dc2_A 209 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR-------- 280 (396)
T ss_dssp CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCC--------
T ss_pred ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccC--------
Confidence 2345689999999999999999999999999999999999999975432221 11112222222111110
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 006884 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKM------DDVVR 602 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~------~ev~~ 602 (627)
.... ...++.+++.+||+.||++||++ +|+++
T Consensus 281 ~p~~---~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~ 318 (396)
T 4dc2_A 281 IPRS---LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 318 (396)
T ss_dssp CCTT---SCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred CCCc---CCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence 0011 12356678889999999999996 56655
No 49
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=5.8e-40 Score=353.50 Aligned_cols=248 Identities=26% Similarity=0.412 Sum_probs=201.6
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHH
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 418 (627)
.+.||+|+||.||+|.++++..||||+++......++|.+|++++..+ +||||+++++++.+ +..++||||+++|+|.
T Consensus 189 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~ 266 (452)
T 1fmk_A 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 266 (452)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEEEECCCTTCBHH
T ss_pred eeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhC-CCCCEeeEEEEEcC-CceEEEehhhcCCCHH
Confidence 478999999999999998888899999987666778899999999999 99999999999876 6789999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-----C
Q 006884 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-----T 493 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~-----~ 493 (627)
+++.... +..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 267 ~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 340 (452)
T 1fmk_A 267 DFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 340 (452)
T ss_dssp HHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred HHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecCCCceecccC
Confidence 9997532 235899999999999999999999998 9999999999999999999999999998764321 2
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
..+++.|+|||++.+..++.++||||||+++|||++ |+.||..... .+....+...... ...
T Consensus 341 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~------~~~~~~i~~~~~~-----------~~~ 403 (452)
T 1fmk_A 341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN------REVLDQVERGYRM-----------PCP 403 (452)
T ss_dssp --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH------HHHHHHHHTTCCC-----------CCC
T ss_pred CcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHcCCCC-----------CCC
Confidence 235678999999998899999999999999999999 9999975421 1112221111100 001
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
......+.+++.+||+.+|++|||++++++.|+.+....
T Consensus 404 ~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 404 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 122345678889999999999999999999999986543
No 50
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=3.4e-40 Score=340.37 Aligned_cols=246 Identities=22% Similarity=0.406 Sum_probs=195.0
Q ss_pred hcccCcCCceEEEEEEEc-CCcE----EEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTT----VVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||.||+|++. +++. ||+|.+.... ...+++.+|++++.++ +||||+++++++... ..++|+||
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~-~~~~v~e~ 97 (327)
T 3poz_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTS-TVQLITQL 97 (327)
T ss_dssp EEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHC-CBTTBCCEEEEEESS-SEEEEEEC
T ss_pred ceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEecC-CeEEEEEe
Confidence 478999999999999964 3443 5888775432 3567899999999999 999999999999865 47899999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 491 (627)
+++|+|.+++.... ..+++..++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 98 ~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 170 (327)
T 3poz_A 98 MPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp CTTCBHHHHHHHST----TSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred cCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence 99999999998653 46899999999999999999999998 999999999999999999999999999876432
Q ss_pred C------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006884 492 T------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 492 ~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
. ...+|+.|+|||++.+..++.++||||||+++|||++ |+.||....... +. ..+......
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~----~~~~~~~~~----- 238 (327)
T 3poz_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---IS----SILEKGERL----- 238 (327)
T ss_dssp CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HH----HHHHTTCCC-----
T ss_pred cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH---HH----HHHHcCCCC-----
Confidence 2 2235778999999999999999999999999999999 999997643221 11 111111100
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
.........+.+++.+||+.+|++||++.|++++|+.+...
T Consensus 239 -----~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 239 -----PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -----CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred -----CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 01112234677888999999999999999999999998654
No 51
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=2.9e-40 Score=335.66 Aligned_cols=254 Identities=23% Similarity=0.409 Sum_probs=197.2
Q ss_pred hcccCcCCceEEEEEEE-----cCCcEEEEEEeccccc-CHHHHHHHHHHHHHhccCCceeceeeEEeeC--CceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAIL-----EDGTTVVVKRLREVAA-TKREFEQQMEVVGTIGKHSNVVPVRAYYYSK--DEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~--~~~~lv~e 410 (627)
.+.||+|+||.||++++ .+++.||||++..... ..+.+.+|++++..+ +||||+++++++... ...++|||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e 93 (295)
T 3ugc_A 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGRRNLKLIME 93 (295)
T ss_dssp EEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECHHHHTSCEEEEE
T ss_pred hheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCCCceEEEEE
Confidence 47899999999999984 2588999999875432 346789999999999 899999999998653 45899999
Q ss_pred cCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC
Q 006884 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF 490 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 490 (627)
|+++|+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 94 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (295)
T 3ugc_A 94 YLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166 (295)
T ss_dssp CCTTCBHHHHHHHCG----GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSCC----
T ss_pred eCCCCCHHHHHHhcc----cccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCcccccccC
Confidence 999999999998653 35899999999999999999999998 99999999999999999999999999987643
Q ss_pred CC-------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCC-------CCC--CHHHHHHHHhh
Q 006884 491 PT-------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHD-------DVV--DLPRWVRSVVR 554 (627)
Q Consensus 491 ~~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~-------~~~--~~~~~~~~~~~ 554 (627)
.. ...++..|+|||++.+..++.++||||||+++|||++|..|+...... ... ...........
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (295)
T 3ugc_A 167 DKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 246 (295)
T ss_dssp ---------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred CcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHh
Confidence 21 223567799999999999999999999999999999999998642100 000 00000111111
Q ss_pred hcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 555 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
... ...........+.+++.+||+.+|++|||++|+++.|+++...
T Consensus 247 ~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 247 NNG----------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp TTC----------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ccC----------cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 110 0011122234677888999999999999999999999998653
No 52
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=4.5e-40 Score=338.99 Aligned_cols=246 Identities=20% Similarity=0.337 Sum_probs=180.3
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHH
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 418 (627)
+.||+|+||.||++..+ +++.||||++... ....+.+|++++..+.+||||+++++++.+....++||||+++|+|.
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 94 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELF 94 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHH
Confidence 67999999999999976 6899999998643 45678899999999966999999999999999999999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC---CeEEeecccccccCCC----
Q 006884 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL---NGCISDVGLAHLINFP---- 491 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~---~~ki~DfG~a~~~~~~---- 491 (627)
+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++ .+||+|||+++.....
T Consensus 95 ~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 166 (325)
T 3kn6_A 95 ERIKKK-----KHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPL 166 (325)
T ss_dssp HHHHHC-----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----
T ss_pred HHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcc
Confidence 999864 35899999999999999999999998 99999999999998765 7999999999865432
Q ss_pred CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCC-CCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 492 TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDV-VDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
....+|+.|+|||++.+..++.++||||||+++|||++|+.||........ ....+....+...... +...
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~----- 238 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFS---FEGE----- 238 (325)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCC---CCSH-----
T ss_pred cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCC---CCcc-----
Confidence 234578999999999999999999999999999999999999986543221 1222222222211110 0000
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.......++.+++.+||+.||++|||++|++++
T Consensus 239 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 239 AWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred cccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 001123457788899999999999999999753
No 53
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=7.5e-40 Score=335.27 Aligned_cols=252 Identities=25% Similarity=0.341 Sum_probs=194.8
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|+..+++.||+|++..... ..+.+.+|++++..+ +||||+++++++.+.+..++||||+++
T Consensus 26 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~- 103 (311)
T 3niz_A 26 LEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKEL-HHPNIVSLIDVIHSERCLTLVFEFMEK- 103 (311)
T ss_dssp EEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHC-CCTTBCCEEEEECCSSCEEEEEECCSE-
T ss_pred hhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHc-CCCCEeeeeeEEccCCEEEEEEcCCCC-
Confidence 478999999999999998899999999875432 236788999999999 999999999999999999999999975
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~---- 491 (627)
+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 104 ~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 176 (311)
T 3niz_A 104 DLKKVLDENK----TGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY 176 (311)
T ss_dssp EHHHHHHTCT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC--
T ss_pred CHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCCCcccc
Confidence 8888887542 35899999999999999999999998 999999999999999999999999999876432
Q ss_pred CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc---h---
Q 006884 492 TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD---V--- 564 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d---~--- 564 (627)
....+|+.|+|||++.+ ..++.++||||||+++|||++|+.||......+. ...+.............. .
T Consensus 177 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~ 253 (311)
T 3niz_A 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ---LPKIFSILGTPNPREWPQVQELPLW 253 (311)
T ss_dssp -CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH---HHHHHHHHCCCCTTTSGGGTTSHHH
T ss_pred cCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHHCCCChHHhhhhhccchh
Confidence 23457899999999876 5689999999999999999999999986543321 111211111111000000 0
Q ss_pred ---hhh--cCCCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 565 ---ELL--KYQDV----EEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 565 ---~l~--~~~~~----~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
... ..... +....++.+++.+||+.||++|||++|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 000 00000 011245678899999999999999999986
No 54
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.6e-40 Score=347.42 Aligned_cols=253 Identities=26% Similarity=0.374 Sum_probs=201.7
Q ss_pred hcccCcCCceEEEEEEEc------CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCc-eeEEE
Q 006884 339 AEVLGKGSYGSTYKAILE------DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDE-KLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~-~~lv~ 409 (627)
.+.||+|+||.||+|++. +++.||||+++.... ..+.+.+|++++.++.+||||+++++++.+.+. .++||
T Consensus 27 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~ 106 (359)
T 3vhe_A 27 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 106 (359)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEE
T ss_pred ceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEE
Confidence 478999999999999842 457899999976432 345799999999999889999999999987655 88999
Q ss_pred ecCCCCcHHHHhhhcCCCC-------------------------------------------------------------
Q 006884 410 SYMPAGSLFMLLHRNRSDG------------------------------------------------------------- 428 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~------------------------------------------------------------- 428 (627)
||+++|+|.++++......
T Consensus 107 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (359)
T 3vhe_A 107 EFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLY 186 (359)
T ss_dssp ECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------CTT
T ss_pred EecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchh
Confidence 9999999999998653210
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC------CCCCCCccccC
Q 006884 429 GTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP------TTATRTIGYRA 502 (627)
Q Consensus 429 ~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~------~~~~~t~~y~a 502 (627)
...+++..++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....+|+.|+|
T Consensus 187 ~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~a 263 (359)
T 3vhe_A 187 KDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 263 (359)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCC
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEC
Confidence 122899999999999999999999998 999999999999999999999999999866332 12346788999
Q ss_pred ccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHH
Q 006884 503 PEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQ 581 (627)
Q Consensus 503 PE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~ 581 (627)
||++.+..++.++||||||+++|||++ |+.||......+ .+............ .......+.+
T Consensus 264 PE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~~~~~~~~~~~~----------~~~~~~~l~~ 327 (359)
T 3vhe_A 264 PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFCRRLKEGTRMRA----------PDYTTPEMYQ 327 (359)
T ss_dssp HHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH------HHHHHHHHTCCCCC----------CTTCCHHHHH
T ss_pred hhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH------HHHHHHHcCCCCCC----------CCCCCHHHHH
Confidence 999999999999999999999999998 999997643221 11111211111110 0112235677
Q ss_pred HHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 582 IALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 582 l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
++.+||+.+|++|||++|++++|+++.+.
T Consensus 328 li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 328 TMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 88899999999999999999999998653
No 55
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.9e-39 Score=331.24 Aligned_cols=264 Identities=17% Similarity=0.261 Sum_probs=206.5
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCC--ceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD--EKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~--~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|++++..+ +||||+++++++.... ..++||||++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (319)
T 4euu_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKNIVKLFAIEEETTTRHKVLIMEFCP 92 (319)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECTTTCCEEEEEECCT
T ss_pred EEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCCcceEEEEeecCCCceEEEEEeCCC
Confidence 478999999999999976 48999999997543 3467788999999999 8999999999998765 6789999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe----cCCCCeEEeecccccccC
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL----TQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl----~~~~~~ki~DfG~a~~~~ 489 (627)
+|+|.+++..... ...+++..+..++.|++.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++...
T Consensus 93 ~~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~ 167 (319)
T 4euu_A 93 CGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (319)
T ss_dssp TCBHHHHHHSGGG--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTCEECC
T ss_pred CCCHHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCceecC
Confidence 9999999986532 234899999999999999999999998 9999999999999 788889999999998765
Q ss_pred CCC---CCCCCccccCccccC--------CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006884 490 FPT---TATRTIGYRAPEVTE--------TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 490 ~~~---~~~~t~~y~aPE~~~--------~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
... ...+|+.|+|||++. +..++.++||||||+++|||++|+.||....... ........+......
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~p~ 245 (319)
T 4euu_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR--RNKEVMYKIITGKPS 245 (319)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGG--GCHHHHHHHHHHCCT
T ss_pred CCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccc--hhHHHHHHHhcCCCc
Confidence 432 345889999999985 5678999999999999999999999997543221 112222222222111
Q ss_pred cc---c-------c--chhhh-cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 559 AE---V-------F--DVELL-KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 559 ~~---~-------~--d~~l~-~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
.. . + ...+. ...........+.+++.+||+.||++|||++|++++..+-...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~ 310 (319)
T 4euu_A 246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (319)
T ss_dssp TCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC-
T ss_pred ccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhc
Confidence 00 0 0 00000 1112345566778899999999999999999999998876543
No 56
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=3.2e-40 Score=330.93 Aligned_cols=245 Identities=27% Similarity=0.406 Sum_probs=190.3
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccc-----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVA-----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|.+. ++.||||+++... ...+.+.+|++++..+ +||||+++++++...+..++||||++
T Consensus 12 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (271)
T 3dtc_A 12 EEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAML-KHPNIIALRGVCLKEPNLCLVMEFAR 89 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHC-CCTTBCCEEEEECCC--CEEEEECCT
T ss_pred eeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhc-CCCCEeeEEEEEecCCceEEEEEcCC
Confidence 478999999999999986 8899999986542 2346789999999999 89999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC--------CCCeEEeecccc
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ--------DLNGCISDVGLA 485 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~--------~~~~ki~DfG~a 485 (627)
+++|.+++.. ..+++..+..++.|++.||.|||+++..+|+||||||+||+++. ++.+||+|||++
T Consensus 90 ~~~L~~~~~~------~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~ 163 (271)
T 3dtc_A 90 GGPLNRVLSG------KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163 (271)
T ss_dssp TEEHHHHHTS------SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-
T ss_pred CCCHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcc
Confidence 9999999863 35899999999999999999999988556999999999999986 778999999999
Q ss_pred cccCCC--CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006884 486 HLINFP--TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 486 ~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
+..... ....+|+.|+|||++.+..++.++||||||+++|||++|+.||..... ...............
T Consensus 164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~--- 234 (271)
T 3dtc_A 164 REWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG------LAVAYGVAMNKLALP--- 234 (271)
T ss_dssp ------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCH------HHHHHHHHTSCCCCC---
T ss_pred cccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHhhhcCCCCCC---
Confidence 866433 234578999999999988999999999999999999999999975421 111111111111100
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006884 564 VELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~ 607 (627)
........+.+++.+||+.+|++|||+.|++++|+++
T Consensus 235 -------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 235 -------IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp -------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred -------CCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 0111224577888899999999999999999999864
No 57
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.8e-39 Score=335.47 Aligned_cols=238 Identities=22% Similarity=0.310 Sum_probs=197.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccc----ccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV----AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+++.+ +++.||+|+++.. ....+.+.+|++++..+ +||||+++++++...+..++||||++
T Consensus 10 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv~E~~~ 88 (337)
T 1o6l_A 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCFVMEYAN 88 (337)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhC-CCCcCcceEEEEEeCCEEEEEEeCCC
Confidence 478999999999999976 6899999999753 23456788999999999 89999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC---
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF--- 490 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~--- 490 (627)
+|+|..++... ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 89 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 160 (337)
T 1o6l_A 89 GGELFFHLSRE-----RVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp TCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhcccCCC
Confidence 99999999864 35899999999999999999999998 99999999999999999999999999986432
Q ss_pred -CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 491 -PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 491 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
..+..||+.|+|||++.+..++.++||||||+++|||++|+.||...+ .......+...... + .
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~------~~~~~~~i~~~~~~---~------p 225 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HERLFELILMEEIR---F------P 225 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCC---C------C
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC------HHHHHHHHHcCCCC---C------C
Confidence 234568999999999999999999999999999999999999997532 12222222221110 0 0
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRP-----KMDDVVRM 603 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~ev~~~ 603 (627)
.. ...++.+++.+||+.+|++|| +++|++++
T Consensus 226 ~~---~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 226 RT---LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp TT---SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CC---CCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 11 123566788899999999999 89999874
No 58
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=339.23 Aligned_cols=238 Identities=22% Similarity=0.317 Sum_probs=195.0
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccc----ccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV----AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.+ +++.||||+++.. ....+.+..|.+++..+.+||||+++++++.+.+..++||||++
T Consensus 28 ~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 107 (353)
T 3txo_A 28 IRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVN 107 (353)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCC
Confidence 478999999999999976 5899999999754 23456688899999988789999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC---
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF--- 490 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~--- 490 (627)
+|+|..++... ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 108 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~ 179 (353)
T 3txo_A 108 GGDLMFHIQKS-----RRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV 179 (353)
T ss_dssp SCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceeecccCCc
Confidence 99999999865 35899999999999999999999998 99999999999999999999999999986432
Q ss_pred -CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 491 -PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 491 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
..+..||+.|+|||++.+..++.++|||||||++|||++|+.||...+. ......+...... + .
T Consensus 180 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~------~~~~~~i~~~~~~---~------p 244 (353)
T 3txo_A 180 TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE------DDLFEAILNDEVV---Y------P 244 (353)
T ss_dssp ------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCC---C------C
T ss_pred cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH------HHHHHHHHcCCCC---C------C
Confidence 2345689999999999988999999999999999999999999975432 2222222222110 0 0
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKM------DDVVR 602 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~------~ev~~ 602 (627)
.. ....+.+++.+||+.+|++||++ +|+++
T Consensus 245 ~~---~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 245 TW---LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp TT---SCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CC---CCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 11 12346678889999999999998 77765
No 59
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.3e-39 Score=328.92 Aligned_cols=251 Identities=20% Similarity=0.292 Sum_probs=200.5
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+++.. +++.||+|++..... ..+.+.+|++++..+ +||||+++++++...+..++||||++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 94 (294)
T 4eqm_A 16 VDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL-SHQNIVSMIDVDEEDDCYYLVMEYIE 94 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTC-CBTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcC-CCCCCceEEEeeeeCCeEEEEEeCCC
Confidence 478999999999999965 688999999854322 246788999999999 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 95 g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 166 (294)
T 4eqm_A 95 GPTLSEYIESH-----GPLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL 166 (294)
T ss_dssp SCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCccccccccc
Confidence 99999999865 35899999999999999999999998 999999999999999999999999999876432
Q ss_pred ---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006884 492 ---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 492 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
....||+.|+|||++.+..++.++||||||+++|||++|+.||..... ............. ......
T Consensus 167 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~------~~~~~~~~~~~~~----~~~~~~ 236 (294)
T 4eqm_A 167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA------VSIAIKHIQDSVP----NVTTDV 236 (294)
T ss_dssp --------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH------HHHHHHHHSSCCC----CHHHHS
T ss_pred cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHhhccCC----Ccchhc
Confidence 223579999999999999999999999999999999999999975421 1111111111111 000001
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHhhcccc
Q 006884 569 YQDVEEEMVQMLQIALSCVAKVPDSRP-KMDDVVRMIEQIQQPE 611 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~P~~RP-s~~ev~~~L~~~~~~~ 611 (627)
... ....+.+++.+|++.+|++|| +++++.+.|+.+....
T Consensus 237 ~~~---~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 237 RKD---IPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp CTT---SCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred ccC---CCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 111 224567788899999999998 9999999999886554
No 60
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1e-39 Score=340.52 Aligned_cols=241 Identities=19% Similarity=0.353 Sum_probs=198.0
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc-------CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA-------TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+++.+ +|+.||+|++..... ..+.+.+|++++..+ +||||+++++++.+.+..++|||
T Consensus 17 ~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lv~e 95 (361)
T 2yab_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQV-LHPNIITLHDVYENRTDVVLILE 95 (361)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEE
T ss_pred eeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhC-CCcCCCcEEEEEEeCCEEEEEEE
Confidence 478999999999999976 689999999875432 357899999999999 89999999999999999999999
Q ss_pred cCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC----CeEEeeccccc
Q 006884 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL----NGCISDVGLAH 486 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~----~~ki~DfG~a~ 486 (627)
|+++|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++ .+||+|||+++
T Consensus 96 ~~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a~ 167 (361)
T 2yab_A 96 LVSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (361)
T ss_dssp CCCSCBHHHHHTTC-----SCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCSSCE
T ss_pred cCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEecCCce
Confidence 99999999999753 35899999999999999999999998 99999999999998877 79999999998
Q ss_pred ccCCC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006884 487 LINFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 487 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
..... ....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+... ......+..... .++
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~------~~~~~~i~~~~~---~~~ 238 (361)
T 2yab_A 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK------QETLANITAVSY---DFD 238 (361)
T ss_dssp ECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHHTTCC---CCC
T ss_pred EcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhcCC---CCC
Confidence 76543 345689999999999999999999999999999999999999975421 122222221111 011
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 564 VELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.... .. ....+.+++.+||..||++|||++|+++
T Consensus 239 ~~~~--~~---~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 239 EEFF--SQ---TSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HHHH--TT---SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred chhc--cC---CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1110 11 1234667888999999999999999986
No 61
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.5e-40 Score=337.52 Aligned_cols=242 Identities=21% Similarity=0.374 Sum_probs=198.0
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc-------CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA-------TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+++.+ +++.||+|++..... ..+.+.+|++++..+ +||||+++++++...+..++|||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e 94 (326)
T 2y0a_A 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QHPNVITLHEVYENKTDVILILE 94 (326)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEE
T ss_pred ceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEEE
Confidence 578999999999999976 589999999865421 367899999999999 89999999999999999999999
Q ss_pred cCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC----CeEEeeccccc
Q 006884 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL----NGCISDVGLAH 486 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~----~~ki~DfG~a~ 486 (627)
|+++|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++ .+||+|||+++
T Consensus 95 ~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 95 LVAGGELFDFLAEK-----ESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp CCCSCBHHHHHTTS-----SCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred cCCCCCHHHHHHhc-----CCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 99999999999753 35899999999999999999999998 99999999999999887 89999999998
Q ss_pred ccCCC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006884 487 LINFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 487 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
..... ....+|+.|+|||++.+..++.++||||||+++|||++|+.||..... ......+..... .+.
T Consensus 167 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~~~~~~~---~~~ 237 (326)
T 2y0a_A 167 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK------QETLANVSAVNY---EFE 237 (326)
T ss_dssp ECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHHHTCC---CCC
T ss_pred ECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH------HHHHHHHHhcCC---CcC
Confidence 76432 344689999999999999999999999999999999999999975321 111211111110 001
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 564 VELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.... ......+.+++.+||..||++|||++|++++
T Consensus 238 ~~~~-----~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 238 DEYF-----SNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp HHHH-----TTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred cccc-----ccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1100 0112356678889999999999999999873
No 62
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.4e-39 Score=329.17 Aligned_cols=247 Identities=21% Similarity=0.443 Sum_probs=196.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc--C------HHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA--T------KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~------~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 409 (627)
.+.||+|+||.||+|+.. +++.||+|++..... . .+.+.+|++++..+ +||||+++++++.+.. ++||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~--~lv~ 100 (287)
T 4f0f_A 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-NHPNIVKLYGLMHNPP--RMVM 100 (287)
T ss_dssp EEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTC-CCTTBCCEEEEETTTT--EEEE
T ss_pred hhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhC-CCCCchhhheeecCCC--eEEE
Confidence 478999999999999975 789999999864322 1 16789999999999 8999999999986554 6999
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC-----eEEeeccc
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN-----GCISDVGL 484 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~-----~ki~DfG~ 484 (627)
||+++|+|.+++... ...+++..+..++.|++.||.|||+++ ++|+||||||+||+++.++. +||+|||+
T Consensus 101 e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~ 175 (287)
T 4f0f_A 101 EFVPCGDLYHRLLDK----AHPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL 175 (287)
T ss_dssp ECCTTCBHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEECCCTT
T ss_pred EecCCCCHHHHHhcc----cCCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeCCCCc
Confidence 999999999988754 246899999999999999999999986 55999999999999988776 99999999
Q ss_pred ccccCCC-CCCCCCccccCcccc--CCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccc
Q 006884 485 AHLINFP-TTATRTIGYRAPEVT--ETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEV 561 (627)
Q Consensus 485 a~~~~~~-~~~~~t~~y~aPE~~--~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (627)
++..... ....+|+.|+|||++ ....++.++||||||+++|||++|+.||....... ................
T Consensus 176 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~ 251 (287)
T 4f0f_A 176 SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK----IKFINMIREEGLRPTI 251 (287)
T ss_dssp CBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH----HHHHHHHHHSCCCCCC
T ss_pred cccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH----HHHHHHHhccCCCCCC
Confidence 9865443 335688999999998 44567899999999999999999999997643321 1112222211111111
Q ss_pred cchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006884 562 FDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607 (627)
Q Consensus 562 ~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~ 607 (627)
.......+.+++.+||+.||++|||++|+++.|+++
T Consensus 252 ----------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 252 ----------PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp ----------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ----------CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 011224567888899999999999999999999874
No 63
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=8.9e-40 Score=339.41 Aligned_cols=252 Identities=22% Similarity=0.389 Sum_probs=202.5
Q ss_pred hcccCcCCceEEEEEEEc------CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILE------DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|+.. +++.||||+++.... ..+.+.+|++++..+ +||||+++++++...+..++|||
T Consensus 52 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e 130 (343)
T 1luf_A 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-DNPNIVKLLGVCAVGKPMCLLFE 130 (343)
T ss_dssp EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEccCCceEEEEe
Confidence 478999999999999975 347899999975432 346789999999999 99999999999999999999999
Q ss_pred cCCCCcHHHHhhhcCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe
Q 006884 411 YMPAGSLFMLLHRNRSD-------------------GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL 471 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl 471 (627)
|+++|+|.+++...... ....+++..++.++.|++.||.|||+++ |+||||||+||++
T Consensus 131 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~ 207 (343)
T 1luf_A 131 YMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLV 207 (343)
T ss_dssp CCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred cCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEE
Confidence 99999999999864321 1256899999999999999999999998 9999999999999
Q ss_pred cCCCCeEEeecccccccCC------CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCC
Q 006884 472 TQDLNGCISDVGLAHLINF------PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVD 544 (627)
Q Consensus 472 ~~~~~~ki~DfG~a~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~ 544 (627)
+.++.+||+|||+++.... .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||.....
T Consensus 208 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~----- 282 (343)
T 1luf_A 208 GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH----- 282 (343)
T ss_dssp CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-----
T ss_pred CCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh-----
Confidence 9999999999999876532 223456888999999998899999999999999999999 9999975321
Q ss_pred HHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 545 LPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
......+. ....... .......+.+++.+||+.+|++||++.++++.|+++....
T Consensus 283 -~~~~~~~~-~~~~~~~----------~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 283 -EEVIYYVR-DGNILAC----------PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp -HHHHHHHH-TTCCCCC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred -HHHHHHHh-CCCcCCC----------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 12222211 1111100 0112235778889999999999999999999999987643
No 64
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=8.9e-40 Score=330.94 Aligned_cols=252 Identities=22% Similarity=0.381 Sum_probs=197.8
Q ss_pred hcccCcCCceEEEEEEEcC-C-------cEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEE
Q 006884 339 AEVLGKGSYGSTYKAILED-G-------TTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 409 (627)
.+.||+|+||.||+|+.+. + ..||+|++.... ...+.+.+|++++..+ +||||+++++++...+..++||
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 91 (289)
T 4fvq_A 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL-SHKHLVLNYGVCVCGDENILVQ 91 (289)
T ss_dssp EEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTS-CCTTBCCEEEEECCTTCCEEEE
T ss_pred eeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEEeCCCCEEEE
Confidence 4789999999999998653 3 479999986543 4567899999999999 8999999999999999999999
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC--------eEEee
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN--------GCISD 481 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~--------~ki~D 481 (627)
||+++|+|.+++.... ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++. +||+|
T Consensus 92 e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D 164 (289)
T 4fvq_A 92 EFVKFGSLDTYLKKNK----NCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164 (289)
T ss_dssp ECCTTCBHHHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred ECCCCCCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccceeeecc
Confidence 9999999999998642 34899999999999999999999998 999999999999998887 99999
Q ss_pred cccccccCCCCCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccc
Q 006884 482 VGLAHLINFPTTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAE 560 (627)
Q Consensus 482 fG~a~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (627)
||++..........+++.|+|||++.+ ..++.++||||||+++|||++|..|+.... .................
T Consensus 165 fg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~ 239 (289)
T 4fvq_A 165 PGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL-----DSQRKLQFYEDRHQLPA 239 (289)
T ss_dssp CCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS-----CHHHHHHHHHTTCCCCC
T ss_pred CcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcccc-----chHHHHHHhhccCCCCC
Confidence 999977655444557889999999987 778999999999999999999655443221 11111111111000000
Q ss_pred ccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccccccCC
Q 006884 561 VFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRNRA 616 (627)
Q Consensus 561 ~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~~~~~ 616 (627)
. ....+.+++.+||+.||++|||++|+++.|+++..+....+.
T Consensus 240 ----------~---~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~~~~ 282 (289)
T 4fvq_A 240 ----------P---KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPRG 282 (289)
T ss_dssp ----------C---SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--------
T ss_pred ----------C---CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCCCCC
Confidence 0 012466788899999999999999999999999887655433
No 65
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.3e-39 Score=336.14 Aligned_cols=237 Identities=20% Similarity=0.324 Sum_probs=195.0
Q ss_pred hcccCcCCceEEEEEEE-cCCcEEEEEEeccc----ccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREV----AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|.. .+++.||||++... ....+.+.+|++++..+ +||||+++++++...+..++||||+
T Consensus 14 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~E~~- 91 (336)
T 3h4j_B 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL-RHPHIIKLYDVITTPTDIVMVIEYA- 91 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEECCC-
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEECC-
Confidence 47899999999999996 46899999998643 22346789999999999 8999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 92 ~g~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~ 163 (336)
T 3h4j_B 92 GGELFDYIVEK-----KRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF 163 (336)
T ss_dssp CEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBT
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceeccCCcc
Confidence 78999998764 35899999999999999999999998 999999999999999999999999999876433
Q ss_pred -CCCCCCccccCccccCCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 492 -TTATRTIGYRAPEVTETRKA-SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
....||+.|+|||++.+..+ +.++||||||+++|+|++|+.||.......... .+........
T Consensus 164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~---------------~i~~~~~~~p 228 (336)
T 3h4j_B 164 LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK---------------KVNSCVYVMP 228 (336)
T ss_dssp TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC---------------CCCSSCCCCC
T ss_pred cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH---------------HHHcCCCCCc
Confidence 34568999999999988776 789999999999999999999998654322211 0000000001
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
. .....+.+++.+||+.||.+|||++|++++
T Consensus 229 ~---~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 229 D---FLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp T---TSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred c---cCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 1 112356678889999999999999999874
No 66
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=3.2e-39 Score=329.89 Aligned_cols=249 Identities=29% Similarity=0.471 Sum_probs=195.5
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|... ..+|+|+++.... ..+.+.+|++++..+ +||||+++++++. .+..++||||+++|
T Consensus 41 ~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~-~~~~~lv~e~~~~~ 116 (307)
T 3lb7_A 41 STRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKT-RHVNILLFMGYMT-KDNLAIVTQWCEGS 116 (307)
T ss_dssp EEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEC-SSSCEEEEECCSSC
T ss_pred EeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEc-cCcEEEEEecCCCC
Confidence 478999999999999865 4689998875433 346788999999999 8999999999864 55688999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC-----
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF----- 490 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~----- 490 (627)
+|.+++... ...+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 117 ~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~ 189 (307)
T 3lb7_A 117 SLYKHLHVQ----ETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp BHHHHHHTS----CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCSSSEEECTTSCEEECCCCSSCC--------
T ss_pred cHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCChhhEEEcCCCCEEEccCCCceecccccccc
Confidence 999999754 246899999999999999999999998 99999999999999999999999999976532
Q ss_pred -CCCCCCCccccCccccC---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhh
Q 006884 491 -PTTATRTIGYRAPEVTE---TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVEL 566 (627)
Q Consensus 491 -~~~~~~t~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 566 (627)
.....||+.|+|||++. +..++.++||||||+++|||++|+.||...... ..+........... .+
T Consensus 190 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~------~~~~~~~~~~~~~~----~~ 259 (307)
T 3lb7_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR------DQIIFMVGRGYASP----DL 259 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH------HHHHHHHHHTCCCC----CS
T ss_pred cccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcH------HHHHHHHhcCCCCc----ch
Confidence 12345889999999985 567889999999999999999999999754321 11111111111110 00
Q ss_pred hcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 567 LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 567 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
.. ........+.+++.+||+.+|++||++.|+++.|+.++..
T Consensus 260 ~~--~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~ 301 (307)
T 3lb7_A 260 SK--LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp TT--SCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred hh--hhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence 00 0011234567788899999999999999999999998754
No 67
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=8.1e-40 Score=335.16 Aligned_cols=254 Identities=27% Similarity=0.433 Sum_probs=205.1
Q ss_pred hcccCcCCceEEEEEEE------cCCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAIL------EDGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|+. .+++.||||++..... ..+.+.+|++++..+.+||||+++++++...+..++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 107 (313)
T 1t46_A 28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITE 107 (313)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred HHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEe
Confidence 47899999999999985 2467899999975432 346789999999999899999999999999999999999
Q ss_pred cCCCCcHHHHhhhcCC-------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCe
Q 006884 411 YMPAGSLFMLLHRNRS-------------DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG 477 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~-------------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ 477 (627)
|+++|+|.+++..... .....+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+
T Consensus 108 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~ 184 (313)
T 1t46_A 108 YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRIT 184 (313)
T ss_dssp CCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEETTTEE
T ss_pred cCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEcCCCCE
Confidence 9999999999986532 11235899999999999999999999998 9999999999999999999
Q ss_pred EEeecccccccCCCC------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHH
Q 006884 478 CISDVGLAHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVR 550 (627)
Q Consensus 478 ki~DfG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~ 550 (627)
||+|||+++...... ...+|+.|+|||++.+..++.++||||||+++|||++ |+.||....... ...
T Consensus 185 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~ 258 (313)
T 1t46_A 185 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS------KFY 258 (313)
T ss_dssp EECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH------HHH
T ss_pred EEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh------HHH
Confidence 999999998765432 2235678999999988899999999999999999999 999997643221 111
Q ss_pred HHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 551 SVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 551 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
.......... ........+.+++.+||+.+|.+|||+.|+++.|+++....
T Consensus 259 ~~~~~~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 259 KMIKEGFRML----------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp HHHHHTCCCC----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HHhccCCCCC----------CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence 1121111100 00112245677888999999999999999999999987643
No 68
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=338.79 Aligned_cols=240 Identities=19% Similarity=0.274 Sum_probs=196.1
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccc----ccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV----AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||++..+ +++.||+|++... ....+.+.+|++++..+ +||||+++++++.+.+..++||||++
T Consensus 20 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lv~e~~~ 98 (384)
T 4fr4_A 20 LRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL-EHPFLVNLWYSFQDEEDMFMVVDLLL 98 (384)
T ss_dssp EEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEEecCC
Confidence 478999999999999976 5889999998653 23457788999999999 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|..++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 99 gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 170 (384)
T 4fr4_A 99 GGDLRYHLQQN-----VHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ 170 (384)
T ss_dssp TEEHHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeeccCCCc
Confidence 99999999754 35899999999999999999999998 999999999999999999999999999876433
Q ss_pred -CCCCCCccccCccccCC---CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006884 492 -TTATRTIGYRAPEVTET---RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~---~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
.+..||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .............
T Consensus 171 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~---~~~~~~~~~~~~~---------- 237 (384)
T 4fr4_A 171 ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS---SKEIVHTFETTVV---------- 237 (384)
T ss_dssp BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC---HHHHHHHHHHCCC----------
T ss_pred eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc---HHHHHHHHhhccc----------
Confidence 34568999999999864 458999999999999999999999997544322 2222221111110
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 006884 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPK-MDDVVR 602 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs-~~ev~~ 602 (627)
.........+.+++.+||+.+|++||+ ++++.+
T Consensus 238 --~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 238 --TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp --CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred --CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 000112235677888999999999998 677664
No 69
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=3.9e-39 Score=334.36 Aligned_cols=245 Identities=20% Similarity=0.302 Sum_probs=195.2
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+++.+ +++.||+|++..... ..+.+.+|.+++..+.+||||+++++++.+.+..++||||++
T Consensus 14 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~ 93 (345)
T 3a8x_A 14 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 93 (345)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCC
Confidence 478999999999999976 588999999976432 234577889999888789999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC---
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF--- 490 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~--- 490 (627)
+|+|.+++... ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 94 gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~ 165 (345)
T 3a8x_A 94 GGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD 165 (345)
T ss_dssp SCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTC
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccccccccCCCC
Confidence 99999999864 25899999999999999999999998 99999999999999999999999999986422
Q ss_pred -CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCC--CHHHHHHHHhhhcccccccchhhh
Q 006884 491 -PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV--DLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 491 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
..+..||+.|+|||++.+..++.++|||||||++|||++|+.||......+.. ................ +
T Consensus 166 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~--~----- 238 (345)
T 3a8x_A 166 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR--I----- 238 (345)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC--C-----
T ss_pred cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC--C-----
Confidence 23456899999999999999999999999999999999999999754322111 1111122211111110 0
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 006884 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKM------DDVVR 602 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~------~ev~~ 602 (627)
.. .....+.+++.+||+.||++||++ +|+++
T Consensus 239 -p~---~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~ 275 (345)
T 3a8x_A 239 -PR---SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 275 (345)
T ss_dssp -CT---TSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT
T ss_pred -CC---CCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc
Confidence 01 112356678889999999999996 56665
No 70
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2.5e-39 Score=338.24 Aligned_cols=244 Identities=19% Similarity=0.289 Sum_probs=191.3
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
.+.||+|+||.||+++.. +++.||||++.......+.+.+|+.+++.+ +||||+++++++...+..++||||+++|+|
T Consensus 25 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~~~L 103 (361)
T 3uc3_A 25 VKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSL-RHPNIVRFKEVILTPTHLAIIMEYASGGEL 103 (361)
T ss_dssp EEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred EEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhC-CCCCCCcEEEEEeeCCEEEEEEEeCCCCCH
Confidence 478999999999999976 689999999987665667889999999999 899999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC--eEEeecccccccCC---CC
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN--GCISDVGLAHLINF---PT 492 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~--~ki~DfG~a~~~~~---~~ 492 (627)
.+++... ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++. +||+|||+++.... ..
T Consensus 104 ~~~l~~~-----~~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~ 175 (361)
T 3uc3_A 104 YERICNA-----GRFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK 175 (361)
T ss_dssp HHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC----------
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCC
Confidence 9999764 25899999999999999999999998 999999999999987765 99999999975432 23
Q ss_pred CCCCCccccCccccCCCCCCCc-chhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006884 493 TATRTIGYRAPEVTETRKASQK-SDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~-~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
...||+.|+|||++.+..++.+ +||||||+++|||++|+.||....... ................ .....
T Consensus 176 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~~~~~~~~~~~~~-------~~~~~ 246 (361)
T 3uc3_A 176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR--DYRKTIQRILSVKYSI-------PDDIR 246 (361)
T ss_dssp -----CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC--CHHHHHHHHHTTCCCC-------CTTSC
T ss_pred CCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH--HHHHHHHHHhcCCCCC-------CCcCC
Confidence 4568999999999988887665 899999999999999999998643322 2233333222211100 00011
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
. ...+.+++.+||..+|++|||+.|++++
T Consensus 247 ~---s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 247 I---SPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp C---CHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred C---CHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 1 2356678889999999999999999985
No 71
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=7.4e-40 Score=337.04 Aligned_cols=241 Identities=22% Similarity=0.343 Sum_probs=193.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|+.++..+ +||||+++++++.+.+..++||||+++|
T Consensus 12 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e~~~~~ 90 (323)
T 3tki_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGG 90 (323)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCeEEEEEEcCCCC
Confidence 478999999999999976 78999999986432 2346688999999999 9999999999999999999999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~---- 491 (627)
+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 91 ~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 162 (323)
T 3tki_A 91 ELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (323)
T ss_dssp EGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred cHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence 999998643 35899999999999999999999998 999999999999999999999999999765321
Q ss_pred --CCCCCCccccCccccCCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006884 492 --TTATRTIGYRAPEVTETRKA-SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
....||+.|+|||++.+..+ +.++||||||+++|||++|+.||........ . .......... .
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~----~~~~~~~~~~---~------ 228 (323)
T 3tki_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-E----YSDWKEKKTY---L------ 228 (323)
T ss_dssp CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH-H----HHHHHTTCTT---S------
T ss_pred ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH-H----HHHHhccccc---C------
Confidence 24568999999999987765 7789999999999999999999976432211 1 1111111000 0
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 569 YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.........+.+++.+||+.||++|||++|++++
T Consensus 229 -~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 229 -NPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp -TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -CccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 0011122355678889999999999999999875
No 72
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=337.56 Aligned_cols=266 Identities=25% Similarity=0.372 Sum_probs=193.6
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHH--HhccCCceeceeeEEee-----CCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVG--TIGKHSNVVPVRAYYYS-----KDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~--~l~~h~niv~~~~~~~~-----~~~~~lv~e~ 411 (627)
.+.||+|+||.||+|+. +++.||||++.... ...+..|.++.. .+ +||||+++++.+.. ....++||||
T Consensus 18 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~~-~h~~i~~~~~~~~~~~~~~~~~~~lv~e~ 93 (336)
T 3g2f_A 18 LELIGRGRYGAVYKGSL-DERPVAVKVFSFAN--RQNFINEKNIYRVPLM-EHDNIARFIVGDERVTADGRMEYLLVMEY 93 (336)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG--HHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECTTSCEEEEEEECC
T ss_pred eeecccCCCeEEEEEEE-CCeEEEEEEeeccc--hhhHHHHHHHHHHHhc-cCcchhhheecccccccCCCceEEEEEec
Confidence 47899999999999987 48999999986433 344445554433 35 99999999986543 2256899999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc---------CCCCeeecCCCCCCeEecCCCCeEEeec
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE---------GGAKFTHGNIKSSNVLLTQDLNGCISDV 482 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~---------~~~~ivH~Dlkp~NILl~~~~~~ki~Df 482 (627)
+++|+|.+++... ..++..+..++.|++.||.|||+. + |+||||||+|||++.++.+||+||
T Consensus 94 ~~~g~L~~~l~~~------~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~---ivH~Dikp~Nill~~~~~~kL~DF 164 (336)
T 3g2f_A 94 YPNGSLXKYLSLH------TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA---ISHRDLNSRNVLVKNDGTCVISDF 164 (336)
T ss_dssp CTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC---EECSSCSGGGEEECTTSCEEECCC
T ss_pred CCCCcHHHHHhhc------ccchhHHHHHHHHHHHHHHHHHhhhccccccccc---eeecccccceEEEcCCCcEEEeec
Confidence 9999999999754 358999999999999999999998 6 999999999999999999999999
Q ss_pred ccccccCCC------------CCCCCCccccCccccCC-------CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCC-
Q 006884 483 GLAHLINFP------------TTATRTIGYRAPEVTET-------RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDV- 542 (627)
Q Consensus 483 G~a~~~~~~------------~~~~~t~~y~aPE~~~~-------~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~- 542 (627)
|+++..... ....||+.|+|||++.+ ..++.++||||||+++|||++|..||........
T Consensus 165 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~ 244 (336)
T 3g2f_A 165 GLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEY 244 (336)
T ss_dssp TTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCC
T ss_pred cceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHH
Confidence 999765321 13358899999999976 4566789999999999999999777643322111
Q ss_pred CCH----------HHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006884 543 VDL----------PRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 543 ~~~----------~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~ 612 (627)
... ................+.. ...........+.+++.+||+.||++|||++|+++.|+++...-.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~ 321 (336)
T 3g2f_A 245 QMAFQTEVGNHPTFEDMQVLVSREKQRPKFPE---AWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWE 321 (336)
T ss_dssp CCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCT---TCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCC
T ss_pred HHhhhcccCCCchHHHHHhhhcccccCCCCCc---ccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHH
Confidence 110 0011111111111111111 111223355678889999999999999999999999999988777
Q ss_pred ccCCCCCC
Q 006884 613 RNRASSGT 620 (627)
Q Consensus 613 ~~~~~~~~ 620 (627)
++...+.+
T Consensus 322 ~~~~~~~~ 329 (336)
T 3g2f_A 322 RNKSVSPT 329 (336)
T ss_dssp C-------
T ss_pred hcccCCCc
Confidence 76665443
No 73
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=3.4e-39 Score=341.74 Aligned_cols=245 Identities=20% Similarity=0.291 Sum_probs=190.2
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEee----CCceeEEEecCCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS----KDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~----~~~~~lv~e~~~~ 414 (627)
+.||+|+||.||++..+ +++.||||++.. ...+.+|++++.++.+||||+++++++.. ....++||||+++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~g 143 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 143 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCS
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCc----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCC
Confidence 57999999999999976 688999999863 34577888888777799999999999875 5568999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC---CCCeEEeecccccccCCC
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ---DLNGCISDVGLAHLINFP 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~---~~~~ki~DfG~a~~~~~~ 491 (627)
|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 144 g~L~~~l~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~ 217 (400)
T 1nxk_A 144 GELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 217 (400)
T ss_dssp EEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCTTCEECC--
T ss_pred CcHHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEecccccccCCC
Confidence 99999997542 246899999999999999999999998 999999999999998 789999999999876432
Q ss_pred ---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCC-CHHHHHHHHhhhcccccccchhhh
Q 006884 492 ---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV-DLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 492 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
.+..+|+.|+|||++.+..++.++|||||||++|||++|+.||......... .....+. ..... ... .
T Consensus 218 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~---~~~~~--~~~---~ 289 (400)
T 1nxk_A 218 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR---MGQYE--FPN---P 289 (400)
T ss_dssp ---------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH---HTCCC--CCT---T
T ss_pred CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH---cCccc--CCC---c
Confidence 3456799999999999999999999999999999999999999865433221 1111111 11100 000 0
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 006884 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~ 605 (627)
.. .....++.+++.+||+.||++|||+.|++++-.
T Consensus 290 ~~---~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~ 324 (400)
T 1nxk_A 290 EW---SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW 324 (400)
T ss_dssp TT---TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred cc---ccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence 01 112235677888999999999999999998543
No 74
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=2.3e-39 Score=327.73 Aligned_cols=248 Identities=25% Similarity=0.388 Sum_probs=205.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
.+.||+|+||.||+|..+ ++..||+|++.......+.+.+|++++..+ +||||+++++++...+..++||||+++|+|
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 96 (288)
T 3kfa_A 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNL 96 (288)
T ss_dssp EEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSEEEEEECCTTEEH
T ss_pred EeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCEEEEEEcCCCCcH
Confidence 468999999999999976 488899999987666678899999999999 899999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-----
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT----- 492 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~----- 492 (627)
.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 97 ~~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 170 (288)
T 3kfa_A 97 LDYLRECN---RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170 (288)
T ss_dssp HHHHHHCC---TTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEET
T ss_pred HHHHHhcc---cCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceeccCCcccccc
Confidence 99998643 346899999999999999999999998 9999999999999999999999999998765432
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006884 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
...+++.|+|||++.+..++.++||||||+++|+|++ |+.||...... .+... ........ .
T Consensus 171 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~---~~~~~----~~~~~~~~----------~ 233 (288)
T 3kfa_A 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---QVYEL----LEKDYRME----------R 233 (288)
T ss_dssp TEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GHHHH----HHTTCCCC----------C
T ss_pred CCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHH----HhccCCCC----------C
Confidence 1234678999999998899999999999999999999 99999764322 11111 11111000 0
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
.......+.+++.+|++.+|++|||++|+++.|+.+...
T Consensus 234 ~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 234 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 111224567888899999999999999999999998654
No 75
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=3.1e-39 Score=333.50 Aligned_cols=240 Identities=20% Similarity=0.328 Sum_probs=191.1
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCc-----------
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDE----------- 404 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~----------- 404 (627)
.+.||+|+||.||+|+.+ +++.||||+++... ...+.+.+|++++.++ +||||+++++++.+...
T Consensus 11 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~~~~~~~ 89 (332)
T 3qd2_B 11 IQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL-EHPGIVRYFNAWLETPPEKWQEEMDEIW 89 (332)
T ss_dssp EEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSC-CCTTBCCEEEEEEECCSCHHHHHHHC--
T ss_pred eeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhC-CCCCEeeEEEEEEEeccchhhhhhhhhh
Confidence 478999999999999976 78999999987443 2457799999999999 89999999999865432
Q ss_pred ----------------------------------------------eeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHH
Q 006884 405 ----------------------------------------------KLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRM 438 (627)
Q Consensus 405 ----------------------------------------------~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~ 438 (627)
.++||||+++|+|.+++..... ....++..++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~ 167 (332)
T 3qd2_B 90 LKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS--LEDREHGVCL 167 (332)
T ss_dssp ------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS--GGGSCHHHHH
T ss_pred hccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC--ccchhhHHHH
Confidence 7899999999999999986532 3446778899
Q ss_pred HHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----------------CCCCCCccccC
Q 006884 439 KIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----------------TTATRTIGYRA 502 (627)
Q Consensus 439 ~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~----------------~~~~~t~~y~a 502 (627)
.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....+|+.|+|
T Consensus 168 ~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 244 (332)
T 3qd2_B 168 HIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS 244 (332)
T ss_dssp HHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred HHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence 99999999999999998 999999999999999999999999999876432 22357899999
Q ss_pred ccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHH
Q 006884 503 PEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQI 582 (627)
Q Consensus 503 PE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l 582 (627)
||++.+..++.++||||||+++|||++|..|+... ...... ...... . .........+.++
T Consensus 245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~--------~~~~~~-~~~~~~----~------~~~~~~~~~~~~l 305 (332)
T 3qd2_B 245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER--------VRIITD-VRNLKF----P------LLFTQKYPQEHMM 305 (332)
T ss_dssp HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH--------HHHHHH-HHTTCC----C------HHHHHHCHHHHHH
T ss_pred hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH--------HHHHHH-hhccCC----C------cccccCChhHHHH
Confidence 99999999999999999999999999987664210 000111 111100 0 0112333456789
Q ss_pred HHHcccCCCCCCCCHHHHHHH
Q 006884 583 ALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 583 ~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
+.+||+.||++|||++|++++
T Consensus 306 i~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 306 VQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHCSSGGGSCCHHHHHHS
T ss_pred HHHHccCCCCcCCCHHHHhhc
Confidence 999999999999999999863
No 76
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=4.2e-39 Score=330.29 Aligned_cols=237 Identities=21% Similarity=0.321 Sum_probs=198.1
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+++.+ +|+.||+|+++... ...+.+.+|+.++..+ +||||+++++++.+.+..++||||++
T Consensus 11 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~lv~e~~~ 89 (318)
T 1fot_A 11 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THPFIIRMWGTFQDAQQIFMIMDYIE 89 (318)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CBTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhC-CCCCCceEeEEEEeCCEEEEEEeCCC
Confidence 478999999999999976 68999999997542 3456788899999998 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC-C
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-T 492 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-~ 492 (627)
+|+|.+++... ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 90 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~ 161 (318)
T 1fot_A 90 GGELFSLLRKS-----QRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY 161 (318)
T ss_dssp SCBHHHHHHHT-----SSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBC
T ss_pred CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecCCccc
Confidence 99999999864 35899999999999999999999998 999999999999999999999999999876443 3
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
+..||+.|+|||++.+..++.++||||||+++|||++|+.||.... .......+...... + ....
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~i~~~~~~---~------p~~~ 226 (318)
T 1fot_A 162 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN------TMKTYEKILNAELR---F------PPFF 226 (318)
T ss_dssp CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHCCCC---C------CTTS
T ss_pred cccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCC---C------CCCC
Confidence 4568999999999999999999999999999999999999997532 12222222222110 0 0111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRP-----KMDDVVR 602 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RP-----s~~ev~~ 602 (627)
..++.+++.+|+..+|++|| +++|+++
T Consensus 227 ---~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 227 ---NEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp ---CHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred ---CHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 23566788899999999999 8999986
No 77
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=3.9e-39 Score=335.59 Aligned_cols=244 Identities=18% Similarity=0.309 Sum_probs=197.1
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc------cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA------ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~------~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||.||+++.+ +++.||||++.... ...+.+.+|++++..+ +||||+++++++.+.+..++||||
T Consensus 29 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e~ 107 (351)
T 3c0i_A 29 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-KHPHIVELLETYSSDGMLYMVFEF 107 (351)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEEeC
Confidence 578999999999999975 68999999986431 2467899999999999 999999999999999999999999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC---eEEeeccccccc
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN---GCISDVGLAHLI 488 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~---~ki~DfG~a~~~ 488 (627)
+++|+|.+++..... .+..+++..+..++.|++.||.|||+++ |+||||||+|||++.++. +||+|||+++..
T Consensus 108 ~~g~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~ 183 (351)
T 3c0i_A 108 MDGADLCFEIVKRAD-AGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183 (351)
T ss_dssp CSSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred CCCCCHHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence 999999988865421 1345899999999999999999999998 999999999999987655 999999999876
Q ss_pred CCC----CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006884 489 NFP----TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 489 ~~~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
... ....||+.|+|||++.+..++.++|||||||++|||++|+.||.... ......+...... +++
T Consensus 184 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-------~~~~~~i~~~~~~---~~~ 253 (351)
T 3c0i_A 184 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK-------ERLFEGIIKGKYK---MNP 253 (351)
T ss_dssp CTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH-------HHHHHHHHHTCCC---CCH
T ss_pred cCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH-------HHHHHHHHcCCCC---CCc
Confidence 543 23468999999999999999999999999999999999999997531 1112222211110 111
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.. .. .....+.+++.+||+.||++|||+.|+++
T Consensus 254 ~~--~~---~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 254 RQ--WS---HISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp HH--HT---TSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cc--cc---cCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00 01 11235677888999999999999999986
No 78
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-39 Score=336.76 Aligned_cols=255 Identities=23% Similarity=0.344 Sum_probs=200.9
Q ss_pred hcccCcCCceEEEEEEEc------CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILE------DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|... ++..||||++.... ...+.+.+|++++.++.+||||+++++++...+..++|||
T Consensus 50 ~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 129 (344)
T 1rjb_A 50 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFE 129 (344)
T ss_dssp EEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEe
Confidence 578999999999999962 35689999987542 2346789999999999889999999999999999999999
Q ss_pred cCCCCcHHHHhhhcCCC------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEec
Q 006884 411 YMPAGSLFMLLHRNRSD------------------GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLT 472 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~ 472 (627)
|+++|+|.+++...... ....+++..++.++.|++.||.|||+.+ |+||||||+||+++
T Consensus 130 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~ 206 (344)
T 1rjb_A 130 YCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVT 206 (344)
T ss_dssp CCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCSGGGEEEE
T ss_pred cCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEEc
Confidence 99999999999865321 0134799999999999999999999998 99999999999999
Q ss_pred CCCCeEEeecccccccCCCC------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCH
Q 006884 473 QDLNGCISDVGLAHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDL 545 (627)
Q Consensus 473 ~~~~~ki~DfG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~ 545 (627)
.++.+||+|||+++...... ...+|+.|+|||++.+..++.++||||||+++|||++ |+.||.......
T Consensus 207 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---- 282 (344)
T 1rjb_A 207 HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA---- 282 (344)
T ss_dssp TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH----
T ss_pred CCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH----
Confidence 99999999999998664332 2235678999999988899999999999999999998 999997653221
Q ss_pred HHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006884 546 PRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 546 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~ 612 (627)
............. ........+.+++.+||+.+|.+|||+.|++++|+.+....-
T Consensus 283 --~~~~~~~~~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 337 (344)
T 1rjb_A 283 --NFYKLIQNGFKMD----------QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE 337 (344)
T ss_dssp --HHHHHHHTTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred --HHHHHHhcCCCCC----------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHH
Confidence 1122222211110 001122456778889999999999999999999999876543
No 79
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=6.7e-39 Score=335.03 Aligned_cols=242 Identities=21% Similarity=0.323 Sum_probs=196.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||++..+ +++.||+|++..... ..+.+.+|++++..+ +||||+++++++.+.+..++||||+++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~lv~e~~~g 112 (362)
T 2bdw_A 34 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFHYLVFDLVTG 112 (362)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence 578999999999999976 689999999975433 235688999999999 999999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC---CCeEEeecccccccCCC
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD---LNGCISDVGLAHLINFP 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~---~~~ki~DfG~a~~~~~~ 491 (627)
|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.+ +.+||+|||+++.....
T Consensus 113 g~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~ 184 (362)
T 2bdw_A 113 GELFEDIVAR-----EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184 (362)
T ss_dssp CBHHHHHTTC-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcceEecCC
Confidence 9999998753 35899999999999999999999998 9999999999999865 45999999999876543
Q ss_pred C---CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006884 492 T---TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 492 ~---~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
. ...||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+........ .+
T Consensus 185 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~------~~~~~~i~~~~~~~~--~~---- 252 (362)
T 2bdw_A 185 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ------HRLYAQIKAGAYDYP--SP---- 252 (362)
T ss_dssp CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCCCC--TT----
T ss_pred cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhCCCCCC--cc----
Confidence 2 34689999999999999999999999999999999999999975321 122222221111000 00
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 569 YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.......++.+++.+||+.||++|||+.|++++
T Consensus 253 --~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 253 --EWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp --GGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred --cccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 001122356778889999999999999999874
No 80
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.2e-39 Score=326.60 Aligned_cols=251 Identities=25% Similarity=0.414 Sum_probs=193.4
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHH
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 418 (627)
.+.||+|+||.||+++.. ++.||||++... ...+.+.+|++++.++ +||||+++++++. +..++||||+++|+|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~ 87 (307)
T 2eva_A 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESE-SERKAFIVELRQLSRV-NHPNIVKLYGACL--NPVCLVMEYAEGGSLY 87 (307)
T ss_dssp EEEEECCSSSEEEEEEET-TEEEEEEECSST-THHHHHHHHHHHHHHC-CCTTBCCEEEBCT--TTTEEEEECCTTCBHH
T ss_pred eeEeecCCCceEEEEEEC-CeeEEEEEecCh-hHHHHHHHHHHHHhcC-CCCCcCeEEEEEc--CCcEEEEEcCCCCCHH
Confidence 478999999999999986 788999998643 3456789999999999 9999999999876 4578999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC-eEEeecccccccCCC-CCCCC
Q 006884 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN-GCISDVGLAHLINFP-TTATR 496 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~-~ki~DfG~a~~~~~~-~~~~~ 496 (627)
+++..... ...+++..++.++.|+++||.|||+.+...|+||||||+||+++.++. +||+|||++...... ....+
T Consensus 88 ~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~g 165 (307)
T 2eva_A 88 NVLHGAEP--LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKG 165 (307)
T ss_dssp HHHHCSSS--EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------C
T ss_pred HHHhccCC--CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccccCCC
Confidence 99975421 234788999999999999999999932223999999999999998887 799999999766433 33458
Q ss_pred CccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHH
Q 006884 497 TIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEM 576 (627)
Q Consensus 497 t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 576 (627)
|+.|+|||++.+..++.++||||||+++|||++|+.||...... ......... ....... .....
T Consensus 166 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~-~~~~~~~----------~~~~~ 230 (307)
T 2eva_A 166 SAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP----AFRIMWAVH-NGTRPPL----------IKNLP 230 (307)
T ss_dssp CTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS----HHHHHHHHH-TTCCCCC----------BTTCC
T ss_pred CCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc----HHHHHHHHh-cCCCCCc----------ccccC
Confidence 99999999999999999999999999999999999999754321 111111111 1111110 01122
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 577 VQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 577 ~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
..+.+++.+||+.+|++|||++|+++.|+.+...-
T Consensus 231 ~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 265 (307)
T 2eva_A 231 KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265 (307)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence 35677888999999999999999999999987543
No 81
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=3.3e-39 Score=345.48 Aligned_cols=242 Identities=17% Similarity=0.282 Sum_probs=195.5
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||++... +|+.||+|++..... ..+.+.+|++++..+ +||||+++++++.+.+..++||||+++
T Consensus 16 ~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lv~E~~~g 94 (444)
T 3soa_A 16 FEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL-KHPNIVRLHDSISEEGHHYLIFDLVTG 94 (444)
T ss_dssp EEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHC-CBTTBCCEEEEEECSSEEEEEECCCBC
T ss_pred EEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCcCCCeEEEEEEECCEEEEEEEeCCC
Confidence 478999999999999865 689999999865432 345688999999999 999999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEec---CCCCeEEeecccccccCCC
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLT---QDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~---~~~~~ki~DfG~a~~~~~~ 491 (627)
|+|.+++... ..+++..+..++.|++.||.|||+++ |+||||||+|||++ .++.+||+|||+++.....
T Consensus 95 g~L~~~i~~~-----~~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~ 166 (444)
T 3soa_A 95 GELFEDIVAR-----EYYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE 166 (444)
T ss_dssp CBHHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTT
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCceeEEecCC
Confidence 9999999864 35899999999999999999999998 99999999999998 4688999999999876543
Q ss_pred ----CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006884 492 ----TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 492 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
....||+.|+|||++.+..++.++||||+||++|+|++|+.||..... ......+...... ....
T Consensus 167 ~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~------~~~~~~i~~~~~~-----~~~~ 235 (444)
T 3soa_A 167 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ------HRLYQQIKAGAYD-----FPSP 235 (444)
T ss_dssp CCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHTCCC-----CCTT
T ss_pred CceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH------HHHHHHHHhCCCC-----CCcc
Confidence 234689999999999999999999999999999999999999975321 1222222211111 0000
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.... ...++.+++.+||+.||++|||+.|++++
T Consensus 236 ~~~~---~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 236 EWDT---VTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp TTTT---SCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cccc---CCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1111 22356678889999999999999999873
No 82
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.2e-39 Score=341.47 Aligned_cols=254 Identities=17% Similarity=0.218 Sum_probs=191.8
Q ss_pred hcccCcCCceEEEEEEEcC------CcEEEEEEecccccCHHHHHHHHHHHHHhc--------------cCCceeceeeE
Q 006884 339 AEVLGKGSYGSTYKAILED------GTTVVVKRLREVAATKREFEQQMEVVGTIG--------------KHSNVVPVRAY 398 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~e~~~l~~l~--------------~h~niv~~~~~ 398 (627)
.+.||+|+||.||+|.+++ ++.||||++.... ..+..|++++.++. +||||++++++
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~ 116 (364)
T 3op5_A 40 GLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDN---GPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGS 116 (364)
T ss_dssp EEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTC---HHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEE
T ss_pred EEEEecCCCeEEEEeeecCccccccccceEEEEeeccc---hhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEee
Confidence 4789999999999999764 4789999986432 23334444333332 69999999999
Q ss_pred EeeC----CceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEec--
Q 006884 399 YYSK----DEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLT-- 472 (627)
Q Consensus 399 ~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~-- 472 (627)
+... ...++||||+ +++|.+++... ...+++..++.++.|++.||.|||+.+ |+||||||+|||++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~----~~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 117 GLHDKNGKSYRFMIMDRF-GSDLQKIYEAN----AKRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEETTEEEEEEEEECE-EEEHHHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEESS
T ss_pred eeeccCCcceEEEEEeCC-CCCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEecC
Confidence 8765 3478999999 99999999864 246999999999999999999999998 99999999999999
Q ss_pred CCCCeEEeecccccccCCC-----------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCC
Q 006884 473 QDLNGCISDVGLAHLINFP-----------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDD 541 (627)
Q Consensus 473 ~~~~~ki~DfG~a~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~ 541 (627)
.++.+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~ 268 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP 268 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH
Confidence 8899999999999765321 22348999999999999999999999999999999999999998533221
Q ss_pred CCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 542 VVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
............ ......+..+. .... ..++.+++..||+.+|++||++.++++.|+++...
T Consensus 269 --~~~~~~~~~~~~-~~~~~~~~~~~-~~~~---~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~ 330 (364)
T 3op5_A 269 --KYVRDSKIRYRE-NIASLMDKCFP-AANA---PGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA 330 (364)
T ss_dssp --HHHHHHHHHHHH-CHHHHHHHHSC-TTCC---CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHhhh-hHHHHHHHhcc-cccC---HHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 111111111111 11111121111 0111 23567788899999999999999999999998654
No 83
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.8e-39 Score=336.52 Aligned_cols=238 Identities=23% Similarity=0.344 Sum_probs=196.2
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccc----ccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV----AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.+ +++.||+|+++.. ....+.+..|.+++..+.+||||+++++++.+.+..++||||++
T Consensus 22 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 101 (345)
T 1xjd_A 22 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLN 101 (345)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCC
Confidence 478999999999999976 5889999999754 23456788889988887799999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC---
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF--- 490 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~--- 490 (627)
+|+|.+++... ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 102 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 173 (345)
T 1xjd_A 102 GGDLMYHIQSC-----HKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA 173 (345)
T ss_dssp TCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhhhhcccCCC
Confidence 99999999864 25899999999999999999999998 99999999999999999999999999986422
Q ss_pred -CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 491 -PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 491 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+. ......+..... .+.
T Consensus 174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~~~~~i~~~~~---~~p------ 238 (345)
T 1xjd_A 174 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE------EELFHSIRMDNP---FYP------ 238 (345)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCC---CCC------
T ss_pred cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH------HHHHHHHHhCCC---CCC------
Confidence 2345689999999999999999999999999999999999999975421 122222221110 000
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHH-HHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMD-DVVR 602 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~-ev~~ 602 (627)
.. ....+.+++.+||..+|++||++. |+++
T Consensus 239 ~~---~s~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 239 RW---LEKEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp TT---SCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred cc---cCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 11 123566788899999999999998 6653
No 84
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=3.7e-39 Score=322.89 Aligned_cols=248 Identities=25% Similarity=0.396 Sum_probs=200.4
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeC--CceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSK--DEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~--~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+++ ++.||||++..... ..+.+.+|++++..+ +||||+++++++... +..++||||++
T Consensus 15 ~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (271)
T 3kmu_A 15 LTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIF-SHPNVLPVLGACQSPPAPHPTLITHWMP 92 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCC-SCTTEECEEEEECTTTSSSCEEEEECCT
T ss_pred HHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhc-CCCchhheEEEEccCCCCCeEeeecccC
Confidence 478999999999999986 88999999875432 345788999999999 899999999999877 67899999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCC
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTT 493 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~ 493 (627)
+|+|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||||||+||+++.++.++|+|||++..... ..
T Consensus 93 ~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~-~~ 167 (271)
T 3kmu_A 93 YGSLYNVLHEGT---NFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQS-PG 167 (271)
T ss_dssp TCBHHHHHHSCS---SCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC-TT
T ss_pred CCcHHHHHhhcc---cCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeecc-cC
Confidence 999999998642 235899999999999999999999976 5699999999999999999999999998765432 34
Q ss_pred CCCCccccCccccCCCCCCC---cchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 494 ATRTIGYRAPEVTETRKASQ---KSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~---~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
..+|+.|+|||++.+..++. ++||||||+++|||++|+.||..... ................ .
T Consensus 168 ~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~~~~~~~-------~- 233 (271)
T 3kmu_A 168 RMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN------MEIGMKVALEGLRPTI-------P- 233 (271)
T ss_dssp CBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH------HHHHHHHHHSCCCCCC-------C-
T ss_pred ccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh------HHHHHHHHhcCCCCCC-------C-
Confidence 56789999999998765544 79999999999999999999975321 1222222222111111 0
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 609 (627)
......+.+++.+||+.+|++|||++|+++.|+++++
T Consensus 234 --~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 234 --PGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp --TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred --CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 1122356778889999999999999999999999875
No 85
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=5.4e-40 Score=338.53 Aligned_cols=246 Identities=22% Similarity=0.399 Sum_probs=194.9
Q ss_pred hcccCcCCceEEEEEEEc-CCcE----EEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTT----VVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||.||+|++. +++. ||+|.+.... ...+.+.+|+.++..+ +||||+++++++. ++..++|+||
T Consensus 18 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-~~~~~~v~e~ 95 (325)
T 3kex_A 18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL-DHAHIVRLLGLCP-GSSLQLVTQY 95 (325)
T ss_dssp EEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTC-CCTTBCCEEEEEC-BSSEEEEEEC
T ss_pred eeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEc-CCccEEEEEe
Confidence 478999999999999965 3443 7788775432 2335677889999999 9999999999886 5678899999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 491 (627)
+++|+|.+++...+ ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 96 ~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 96 LPLGSLLDHVRQHR----GALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp CTTCBSHHHHHSSG----GGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred CCCCCHHHHHHHcc----ccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 99999999997542 35889999999999999999999998 999999999999999999999999999876432
Q ss_pred C------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006884 492 T------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 492 ~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
. ...++..|+|||++.+..++.++||||||+++|||++ |+.||......+ +.. ......... .+
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~----~~~~~~~~~--~~ 239 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE---VPD----LLEKGERLA--QP 239 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH---HHH----HHHTTCBCC--CC
T ss_pred cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH---HHH----HHHcCCCCC--CC
Confidence 2 2335778999999998899999999999999999999 999998643221 111 111111000 00
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
......+.+++.+||+.+|++||++.|+++.|+.+...
T Consensus 240 --------~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 240 --------QICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp --------TTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred --------CcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 01112456788899999999999999999999998654
No 86
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.2e-39 Score=356.02 Aligned_cols=247 Identities=26% Similarity=0.419 Sum_probs=205.0
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHH
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 418 (627)
.+.||+|+||.||+|.++++..||||+++......++|.+|++++..+ +|+||+++++++.+ +..++||||+++|+|.
T Consensus 272 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~ 349 (535)
T 2h8h_A 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 349 (535)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEEEECCCTTEEHH
T ss_pred heecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhC-CCCCEeeEEEEEee-ccceEeeehhcCCcHH
Confidence 478999999999999998888999999987666778899999999999 99999999999865 6789999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC-----CC
Q 006884 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-----TT 493 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-----~~ 493 (627)
+++.... +..+++..++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 350 ~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~ 423 (535)
T 2h8h_A 350 DFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 423 (535)
T ss_dssp HHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCS
T ss_pred HHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccC
Confidence 9997532 235899999999999999999999998 999999999999999999999999999876431 23
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
..++..|+|||++.+..++.++||||||+++|||++ |+.||..... .+....+. ...... ..
T Consensus 424 ~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~------~~~~~~i~-~~~~~~----------~~ 486 (535)
T 2h8h_A 424 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN------REVLDQVE-RGYRMP----------CP 486 (535)
T ss_dssp TTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH------HHHHHHHH-TTCCCC----------CC
T ss_pred CcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHH-cCCCCC----------CC
Confidence 345778999999998899999999999999999999 9999975421 11122211 111100 01
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
......+.+++.+||+.+|++|||+++|++.|+.+...
T Consensus 487 ~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 487 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 12234567888999999999999999999999998654
No 87
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=2.1e-39 Score=332.27 Aligned_cols=251 Identities=25% Similarity=0.389 Sum_probs=202.5
Q ss_pred hcccCcCCceEEEEEEE------cCCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAIL------EDGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|.. .+++.||||++..... ..+.+.+|++++..+ +||||+++++++...+..++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e 106 (314)
T 2ivs_A 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV-NHPHVIKLYGACSQDGPLLLIVE 106 (314)
T ss_dssp EEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhC-CCCceeeEEEEEecCCceEEEEe
Confidence 47899999999999986 2357899999875432 346788999999999 99999999999999999999999
Q ss_pred cCCCCcHHHHhhhcCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe
Q 006884 411 YMPAGSLFMLLHRNRSD-------------------GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL 471 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl 471 (627)
|+++|+|.+++...... ....+++..++.++.|++.||.|||+++ |+||||||+||++
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dikp~NIli 183 (314)
T 2ivs_A 107 YAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLAARNILV 183 (314)
T ss_dssp CCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEE
T ss_pred ecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---CcccccchheEEE
Confidence 99999999999865321 1234899999999999999999999998 9999999999999
Q ss_pred cCCCCeEEeecccccccCCC------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCC
Q 006884 472 TQDLNGCISDVGLAHLINFP------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVD 544 (627)
Q Consensus 472 ~~~~~~ki~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~ 544 (627)
+.++.+||+|||+++..... ....+++.|+|||++.+..++.++||||||+++|||++ |+.||.......
T Consensus 184 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--- 260 (314)
T 2ivs_A 184 AEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER--- 260 (314)
T ss_dssp ETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---
Confidence 99999999999999866432 22345778999999998889999999999999999999 999997643221
Q ss_pred HHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 545 LPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
+. .......... ........+.+++.+||+.+|++||++.|+++.|+++...
T Consensus 261 ~~----~~~~~~~~~~----------~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 261 LF----NLLKTGHRME----------RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp HH----HHHHTTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HH----HHhhcCCcCC----------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 11 1111111100 0011224567888899999999999999999999998643
No 88
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=2.8e-39 Score=339.17 Aligned_cols=241 Identities=22% Similarity=0.325 Sum_probs=193.3
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
+.||+|+||.||+|... +|+.||+|+++... ...+.+.+|++++..+ +||||+++++++...+..++||||+++|+|
T Consensus 95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL-DHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred eEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 57999999999999965 68999999987543 3456799999999999 999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe--cCCCCeEEeecccccccCCC---C
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL--TQDLNGCISDVGLAHLINFP---T 492 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl--~~~~~~ki~DfG~a~~~~~~---~ 492 (627)
.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++..... .
T Consensus 174 ~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~ 246 (373)
T 2x4f_A 174 FDRIIDES----YNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLK 246 (373)
T ss_dssp HHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCC
T ss_pred HHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccc
Confidence 99987542 35899999999999999999999998 9999999999999 56788999999999876543 2
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
...+|+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+....+... .. ....
T Consensus 247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~------~~~~~~~i~~~~~~~~--~~---~~~~- 314 (373)
T 2x4f_A 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN------DAETLNNILACRWDLE--DE---EFQD- 314 (373)
T ss_dssp CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHTCCCSC--SG---GGTT-
T ss_pred cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhccCCCC--hh---hhcc-
Confidence 3458999999999999999999999999999999999999997542 1222333332221110 00 0111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
...++.+++.+||+.+|++|||++|+++
T Consensus 315 --~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 315 --ISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp --SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --CCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 2235677888999999999999999998
No 89
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=326.44 Aligned_cols=236 Identities=19% Similarity=0.227 Sum_probs=188.0
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccC---HHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAAT---KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||+||+|+.. +++.||||++...... ...+..|+..+..+.+||||+++++++.+.+..++||||+ +
T Consensus 62 ~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~ 140 (311)
T 3p1a_A 62 LSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-G 140 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-C
T ss_pred eheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-C
Confidence 468999999999999976 7899999998654332 3345566666666669999999999999999999999999 7
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
++|.+++.... ..++|..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 141 ~~L~~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 213 (311)
T 3p1a_A 141 PSLQQHCEAWG----ASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAG 213 (311)
T ss_dssp CBHHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC-----
T ss_pred CCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeecccCCCC
Confidence 79999887652 46999999999999999999999998 999999999999999999999999998776433
Q ss_pred CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006884 492 TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
....||++|+|||++.+ .++.++||||||+++|||++|..|+.... . . ..+.... ..+...
T Consensus 214 ~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~--------~-~-~~~~~~~----~~~~~~---- 274 (311)
T 3p1a_A 214 EVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE--------G-W-QQLRQGY----LPPEFT---- 274 (311)
T ss_dssp -CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH--------H-H-HHHTTTC----CCHHHH----
T ss_pred cccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc--------H-H-HHHhccC----CCcccc----
Confidence 23458999999999876 79999999999999999999977664311 0 0 1111111 111111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
......+.+++.+||+.+|++|||++|+++
T Consensus 275 -~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 275 -AGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp -TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -cCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 111245778888999999999999999986
No 90
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.7e-39 Score=333.01 Aligned_cols=252 Identities=23% Similarity=0.390 Sum_probs=190.9
Q ss_pred hcccCcCCceEEEEEEEcCCc----EEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCce------
Q 006884 339 AEVLGKGSYGSTYKAILEDGT----TVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEK------ 405 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~----~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~------ 405 (627)
.+.||+|+||.||+|+..... .||||+++... ...+.+.+|++++..+ +||||+++++++......
T Consensus 28 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~ 106 (323)
T 3qup_A 28 GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF-DHPHVAKLVGVSLRSRAKGRLPIP 106 (323)
T ss_dssp EEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTC-CCTTBCCCCEEEECC-------CE
T ss_pred eceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHC-CCCceehhhceeeccccccCCCcc
Confidence 478999999999999965432 79999987542 2356789999999999 999999999999877655
Q ss_pred eEEEecCCCCcHHHHhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccc
Q 006884 406 LVVYSYMPAGSLFMLLHRNRSD-GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGL 484 (627)
Q Consensus 406 ~lv~e~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~ 484 (627)
++|+||+++|+|.+++...... ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 107 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~~~kl~Dfg~ 183 (323)
T 3qup_A 107 MVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGL 183 (323)
T ss_dssp EEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC
T ss_pred EEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCCCEEEeeccc
Confidence 8999999999999999764321 1235899999999999999999999998 99999999999999999999999999
Q ss_pred ccccCCCC------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcc
Q 006884 485 AHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEW 557 (627)
Q Consensus 485 a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 557 (627)
++...... ...+++.|+|||++.+..++.++||||||+++|||++ |+.||......+ ..........
T Consensus 184 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~------~~~~~~~~~~ 257 (323)
T 3qup_A 184 SRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE------IYNYLIGGNR 257 (323)
T ss_dssp -----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG------HHHHHHTTCC
T ss_pred cccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH------HHHHHhcCCC
Confidence 98764322 2335678999999999999999999999999999999 999997643221 1111111111
Q ss_pred cccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 558 TAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 558 ~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
. .........+.+++.+||+.||++|||+.++++.|+++....
T Consensus 258 ~-----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 258 L-----------KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp C-----------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred C-----------CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 0 011122345778889999999999999999999999986543
No 91
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.9e-41 Score=344.18 Aligned_cols=255 Identities=25% Similarity=0.390 Sum_probs=184.2
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHh-ccCCceeceeeEEeeCC----ceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTI-GKHSNVVPVRAYYYSKD----EKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~~h~niv~~~~~~~~~~----~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.. ++.||||++.. .....+.+|.+++..+ .+||||+++++++.... ..++||||++
T Consensus 8 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~--~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 84 (303)
T 3gxj_A 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFSS--REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 84 (303)
T ss_dssp CEEEEECSSSEEEEC-CT-TSCEEEEECC---TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECCT
T ss_pred hhhccCCCCeEEEEEEEc-CcceEEEEecc--cchhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEeccC
Confidence 478999999999999875 88999999864 3456677888887773 39999999999998876 6899999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeeecCCCCCCeEecCCCCeEEeecccc
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH--------SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA 485 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a 485 (627)
+|+|.+++... .+++..+..++.|++.||.||| +.+ |+||||||+|||++.++.+||+|||++
T Consensus 85 ~g~L~~~l~~~------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nil~~~~~~~kl~DFg~a 155 (303)
T 3gxj_A 85 HGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp TCCHHHHHHHC------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCCCC-
T ss_pred CCCHHHHHhcc------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC---EeeCcCCHHHeEECCCCCEEEeecCcc
Confidence 99999999753 4788889999999999999999 776 999999999999999999999999999
Q ss_pred cccCCCC--------CCCCCccccCccccCCC------CCCCcchhHHHHHHHHHHHhC----------CCCCCCCCCCC
Q 006884 486 HLINFPT--------TATRTIGYRAPEVTETR------KASQKSDVYSFGVLLLEMLTG----------KAPLQHSGHDD 541 (627)
Q Consensus 486 ~~~~~~~--------~~~~t~~y~aPE~~~~~------~~~~~~Dv~S~Gvvl~el~tg----------~~pf~~~~~~~ 541 (627)
+...... ...+|+.|+|||++.+. .++.++||||||+++|||++| +.||.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3gxj_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-C
T ss_pred eeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCC
Confidence 7654332 22589999999998776 344689999999999999999 66665432211
Q ss_pred CCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 542 VVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
. ........ .........+. ......+....+.+++.+||+.||++|||++|+++.|+++...+
T Consensus 236 ~-~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 236 P-SVEEMRKV-VCEQKLRPNIP----NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp C-CCC-CHHH-HTTSCCCCCCC----GGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred c-cHHHHHHH-HHHhhcCCCcc----ccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 1 00011111 11111111111 11112356667889999999999999999999999999997654
No 92
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=330.85 Aligned_cols=239 Identities=21% Similarity=0.307 Sum_probs=187.5
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---------------------------CHHHHHHHHHHHHHhccCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---------------------------TKREFEQQMEVVGTIGKHS 390 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---------------------------~~~~~~~e~~~l~~l~~h~ 390 (627)
.+.||+|+||.||+|+.. +++.||||++..... ..+.+.+|++++..+ +||
T Consensus 18 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~ 96 (298)
T 2zv2_A 18 KDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKL-DHP 96 (298)
T ss_dssp EEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTC-CCT
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhC-CCC
Confidence 478999999999999965 688999999864321 124688999999999 999
Q ss_pred ceeceeeEEee--CCceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCC
Q 006884 391 NVVPVRAYYYS--KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSN 468 (627)
Q Consensus 391 niv~~~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~N 468 (627)
||+++++++.. .+..++||||+++|+|.+++.. ..+++..+..++.|++.||.|||+++ |+||||||+|
T Consensus 97 ~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~N 167 (298)
T 2zv2_A 97 NVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL------KPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKPSN 167 (298)
T ss_dssp TBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS------SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGG
T ss_pred CCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHH
Confidence 99999999986 5678999999999999876532 36899999999999999999999998 9999999999
Q ss_pred eEecCCCCeEEeecccccccCCC----CCCCCCccccCccccCCCC---CCCcchhHHHHHHHHHHHhCCCCCCCCCCCC
Q 006884 469 VLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRAPEVTETRK---ASQKSDVYSFGVLLLEMLTGKAPLQHSGHDD 541 (627)
Q Consensus 469 ILl~~~~~~ki~DfG~a~~~~~~----~~~~~t~~y~aPE~~~~~~---~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~ 541 (627)
||++.++.+||+|||+++..... ....+|+.|+|||++.+.. ++.++||||||+++|||++|+.||....
T Consensus 168 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~--- 244 (298)
T 2zv2_A 168 LLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER--- 244 (298)
T ss_dssp EEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS---
T ss_pred EEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc---
Confidence 99999999999999999876433 2346899999999997765 3788999999999999999999997532
Q ss_pred CCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 542 VVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.......+...... ...... ....+.+++.+||+.||++|||+.|++++
T Consensus 245 ---~~~~~~~~~~~~~~-------~~~~~~---~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 245 ---IMCLHSKIKSQALE-------FPDQPD---IAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp ---HHHHHHHHHHCCCC-------CCSSSC---CCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred ---HHHHHHHHhcccCC-------CCCccc---cCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 11222211111100 000111 22356778889999999999999999753
No 93
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.1e-38 Score=329.94 Aligned_cols=254 Identities=26% Similarity=0.398 Sum_probs=203.4
Q ss_pred hcccCcCCceEEEEEEEc--------CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEE
Q 006884 339 AEVLGKGSYGSTYKAILE--------DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv 408 (627)
.+.||+|+||.||+|... ++..||||++..... ..+.+.+|++++..+.+||||+++++++...+..++|
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 119 (334)
T 2pvf_A 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 119 (334)
T ss_dssp EEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEE
T ss_pred eeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEE
Confidence 478999999999999863 467899999875432 3467889999999998999999999999999999999
Q ss_pred EecCCCCcHHHHhhhcCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCe
Q 006884 409 YSYMPAGSLFMLLHRNRSD-----------GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG 477 (627)
Q Consensus 409 ~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ 477 (627)
|||+++|+|.+++...... ....+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+
T Consensus 120 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~ 196 (334)
T 2pvf_A 120 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVM 196 (334)
T ss_dssp EECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCE
T ss_pred EECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEEEcCCCCE
Confidence 9999999999999865321 1234899999999999999999999998 9999999999999999999
Q ss_pred EEeecccccccCCC------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHH
Q 006884 478 CISDVGLAHLINFP------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVR 550 (627)
Q Consensus 478 ki~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~ 550 (627)
||+|||+++..... ....+++.|+|||++.+..++.++||||||+++|||++ |+.||.... ......
T Consensus 197 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~------~~~~~~ 270 (334)
T 2pvf_A 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------VEELFK 270 (334)
T ss_dssp EECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC------HHHHHH
T ss_pred EEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC------HHHHHH
Confidence 99999999876432 22345778999999988889999999999999999999 999997542 122222
Q ss_pred HHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006884 551 SVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 551 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~ 612 (627)
.+. ...... ........+.+++.+||+.+|.+|||+.|+++.|+++.....
T Consensus 271 ~~~-~~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 271 LLK-EGHRMD----------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp HHH-HTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HHh-cCCCCC----------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 211 111110 001122356778889999999999999999999999876433
No 94
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=9.3e-40 Score=341.75 Aligned_cols=192 Identities=21% Similarity=0.338 Sum_probs=171.0
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhc----cCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIG----KHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~----~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.. +++.||||+++......+.+..|++++..+. .||||+++++++...+..++||||+
T Consensus 40 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~- 118 (360)
T 3llt_A 40 IRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL- 118 (360)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-
T ss_pred EEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-
Confidence 478999999999999974 6889999999765555667888999999984 4999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC--------------------
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ-------------------- 473 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~-------------------- 473 (627)
+++|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.
T Consensus 119 ~~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~ 192 (360)
T 3llt_A 119 GPSLYEIITRNN---YNGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQ 192 (360)
T ss_dssp CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEE
T ss_pred CCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEccccccccccchhccccccccc
Confidence 999999998653 235899999999999999999999998 999999999999975
Q ss_pred -----CCCeEEeecccccccCC-CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 006884 474 -----DLNGCISDVGLAHLINF-PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHS 537 (627)
Q Consensus 474 -----~~~~ki~DfG~a~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~ 537 (627)
++.+||+|||+++.... .....+|+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 193 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 262 (360)
T 3llt_A 193 IYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH 262 (360)
T ss_dssp EEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence 88999999999987644 34456899999999999999999999999999999999999999754
No 95
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=8.2e-39 Score=322.17 Aligned_cols=247 Identities=27% Similarity=0.470 Sum_probs=203.2
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHH
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 418 (627)
.+.||+|+||.||+|..+++..||+|++.......+.+.+|++++..+ +||||+++++++. .+..++||||+++++|.
T Consensus 18 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~ 95 (279)
T 1qpc_A 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAVVT-QEPIYIITEYMENGSLV 95 (279)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHC-CCTTBCCEEEEEC-SSSCEEEEECCTTCBHH
T ss_pred eeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhC-CCcCcceEEEEEc-CCCcEEEEecCCCCCHH
Confidence 478999999999999998888999999987666788899999999999 9999999999876 45688999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-----C
Q 006884 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-----T 493 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~-----~ 493 (627)
+++.... +..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++...... .
T Consensus 96 ~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 169 (279)
T 1qpc_A 96 DFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 169 (279)
T ss_dssp HHTTSHH---HHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTT
T ss_pred HHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccC
Confidence 9997532 125899999999999999999999998 9999999999999999999999999998764322 2
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
..++..|+|||++.+..++.++||||||+++|||++ |+.||..... ......+.. ..... ..
T Consensus 170 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------~~~~~~~~~-~~~~~-------~~--- 232 (279)
T 1qpc_A 170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLER-GYRMV-------RP--- 232 (279)
T ss_dssp CCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH------HHHHHHHHT-TCCCC-------CC---
T ss_pred CCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH------HHHHHHHhc-ccCCC-------Cc---
Confidence 335678999999988889999999999999999999 9999975321 122222111 11000 01
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
......+.+++.+|++.+|++|||+.++++.|+++...
T Consensus 233 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 233 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 11223567788899999999999999999999998654
No 96
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=3e-39 Score=325.79 Aligned_cols=246 Identities=22% Similarity=0.373 Sum_probs=190.2
Q ss_pred hcccCcCCceEEEEEEEcC----CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAILED----GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 412 (627)
.+.||+|+||.||+|.... +..||+|++..... ..+.+.+|+.++..+ +||||+++++++. ++..++||||+
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-~~~~~lv~e~~ 97 (281)
T 1mp8_A 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKLIGVIT-ENPVWIIMELC 97 (281)
T ss_dssp EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred EeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCccceEEEEEc-cCccEEEEecC
Confidence 4789999999999999753 45799999875422 346788999999999 9999999999974 56788999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT 492 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~ 492 (627)
++|+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 98 ~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (281)
T 1mp8_A 98 TLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 170 (281)
T ss_dssp TTEEHHHHHHHTT----TTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred CCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECccccccccCccc
Confidence 9999999997642 35899999999999999999999998 9999999999999999999999999998764332
Q ss_pred -----CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhh
Q 006884 493 -----TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVEL 566 (627)
Q Consensus 493 -----~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 566 (627)
...+++.|+|||++.+..++.++||||||+++|||++ |+.||......+ . ...+...... .
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~---~---~~~i~~~~~~-~------ 237 (281)
T 1mp8_A 171 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---V---IGRIENGERL-P------ 237 (281)
T ss_dssp --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---H---HHHHHTTCCC-C------
T ss_pred ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH---H---HHHHHcCCCC-C------
Confidence 2235678999999998899999999999999999997 999997643221 1 1111111110 0
Q ss_pred hcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 567 LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 567 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
........+.+++.+||+.+|++|||+.|+++.|+++...
T Consensus 238 ----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 238 ----MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 0111234567788899999999999999999999998654
No 97
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.4e-39 Score=344.37 Aligned_cols=241 Identities=21% Similarity=0.298 Sum_probs=195.1
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.+ +++.||+|++.... ...+.+.+|++++..+ +||||+++++++.+.+..++||||++
T Consensus 74 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lV~E~~~ 152 (410)
T 3v8s_A 74 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDDRYLYMVMEYMP 152 (410)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEEEEeCCC
Confidence 468999999999999976 58899999986532 2334578899999999 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|.++++.. .+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 153 gg~L~~~l~~~------~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~ 223 (410)
T 3v8s_A 153 GGDLVNLMSNY------DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 223 (410)
T ss_dssp TEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSE
T ss_pred CCcHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEeccceeEeeccCCc
Confidence 99999999753 4899999999999999999999998 999999999999999999999999999876443
Q ss_pred ---CCCCCCccccCccccCCCC----CCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006884 492 ---TTATRTIGYRAPEVTETRK----ASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 492 ---~~~~~t~~y~aPE~~~~~~----~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
.+..||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+ .......+........
T Consensus 224 ~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~------~~~~~~~i~~~~~~~~---- 293 (410)
T 3v8s_A 224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS------LVGTYSKIMNHKNSLT---- 293 (410)
T ss_dssp EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHTHHHHCC----
T ss_pred ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCC------hhhHHHHHHhcccccc----
Confidence 3567899999999997655 7899999999999999999999997542 2222222222110000
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 006884 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDS--RPKMDDVVRM 603 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~--RPs~~ev~~~ 603 (627)
....... ..++.+++.+|+..+|.+ ||+++||+++
T Consensus 294 -~p~~~~~---s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 294 -FPDDNDI---SKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp -CCTTCCC---CHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred -CCCcccc---cHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 0011112 234567788999988988 9999999874
No 98
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.1e-38 Score=321.91 Aligned_cols=253 Identities=17% Similarity=0.202 Sum_probs=198.4
Q ss_pred hcccCcCCceEEEEEEE-cCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEE-eeCCceeEEEecCCCCc
Q 006884 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY-YSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~-~~~~~~~lv~e~~~~gs 416 (627)
.+.||+|+||.||+|+. .+++.||||++.... ..+++.+|++++..+ +|++++..+.++ ...+..++||||+ +++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l-~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (296)
T 3uzp_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMM-QGGVGIPTIRWCGAEGDYNVMVMELL-GPS 90 (296)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEESCS-SCCHHHHHHHHHHHH-TTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc-chhHHHHHHHHHHHh-hcCCCCCccccccCCCCceEEEEEec-CCC
Confidence 47899999999999996 478999999886543 335688999999999 666655555544 5667789999999 999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe---cCCCCeEEeecccccccCCC--
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL---TQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl---~~~~~~ki~DfG~a~~~~~~-- 491 (627)
|.+++.... ..+++..+..++.|++.||.|||+++ |+||||||+||++ +.++.+||+|||+++.....
T Consensus 91 L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 163 (296)
T 3uzp_A 91 LEDLFNFCS----RKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp HHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred HHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccc
Confidence 999997542 35899999999999999999999998 9999999999999 48899999999999876432
Q ss_pred ---------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006884 492 ---------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 492 ---------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
....+|+.|+|||++.+..++.++||||||+++|||++|+.||..............+.........
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---- 239 (296)
T 3uzp_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI---- 239 (296)
T ss_dssp CCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH----
T ss_pred ccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch----
Confidence 2345789999999999999999999999999999999999999875544333332222111100000
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
..+ ... ....+.+++.+||+.+|++|||++++++.|+++....
T Consensus 240 -~~~--~~~---~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 282 (296)
T 3uzp_A 240 -EVL--CKG---YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp -HHH--TTT---SCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred -HHH--Hhh---CCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence 000 011 1235777888999999999999999999999986553
No 99
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.9e-39 Score=323.78 Aligned_cols=249 Identities=20% Similarity=0.310 Sum_probs=202.1
Q ss_pred cccCcCCceEEEEEEEc---CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 340 EVLGKGSYGSTYKAILE---DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
+.||+|+||.||+|.+. ++..||||+++... ...+.+.+|++++..+ +||||+++++++ ..+..++||||+++
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~-~~~~~~lv~e~~~~ 93 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLIGVC-QAEALMLVMEMAGG 93 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEE-ESSSEEEEEECCTT
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhC-CCCCEeEEEEEe-cCCCcEEEEEeCCC
Confidence 47999999999999854 57789999997642 2356789999999999 999999999998 56678999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
++|.+++... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 94 ~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 166 (287)
T 1u59_A 94 GPLHKFLVGK----REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY 166 (287)
T ss_dssp EEHHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred CCHHHHHHhC----CccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeeeccCcce
Confidence 9999999743 246899999999999999999999998 999999999999999999999999999876432
Q ss_pred ----CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhh
Q 006884 492 ----TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVEL 566 (627)
Q Consensus 492 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 566 (627)
....+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... .....+.. .....
T Consensus 167 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------~~~~~i~~-~~~~~------ 233 (287)
T 1u59_A 167 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP------EVMAFIEQ-GKRME------ 233 (287)
T ss_dssp ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH------HHHHHHHT-TCCCC------
T ss_pred eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH------HHHHHHhc-CCcCC------
Confidence 12335788999999988889999999999999999998 99999764321 11111111 11100
Q ss_pred hcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccccc
Q 006884 567 LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRN 614 (627)
Q Consensus 567 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~~~ 614 (627)
........+.+++.+||+.+|++||++.|+++.|+++....-..
T Consensus 234 ----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 277 (287)
T 1u59_A 234 ----CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 277 (287)
T ss_dssp ----CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred ----CCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCc
Confidence 01122346777888999999999999999999999997665444
No 100
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.2e-39 Score=329.97 Aligned_cols=250 Identities=23% Similarity=0.349 Sum_probs=192.9
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|+..+++.||+|++.... ...+.+.+|++++..+ +||||+++++++...+..++||||+++
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~- 84 (288)
T 1ob3_A 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKEL-KHSNIVKLYDVIHTKKRLVLVFEHLDQ- 84 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGC-CCTTBCCEEEEEECSSCEEEEEECCSE-
T ss_pred hhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhc-CCCCEeeeeeEEccCCeEEEEEEecCC-
Confidence 46899999999999999889999999986442 2346788999999999 899999999999999999999999975
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~---- 491 (627)
+|.+++.... ..+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (288)
T 1ob3_A 85 DLKKLLDVCE----GGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY 157 (288)
T ss_dssp EHHHHHHTST----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred CHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCcccccc
Confidence 9999887542 35899999999999999999999998 999999999999999999999999999765432
Q ss_pred CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhh---hcccc--------
Q 006884 492 TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVR---EEWTA-------- 559 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~-------- 559 (627)
....+|+.|+|||++.+ ..++.++||||||+++|||++|+.||...... .....+.. .....
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
T 1ob3_A 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA------DQLMRIFRILGTPNSKNWPNVTEL 231 (288)
T ss_dssp ----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred ccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHHHCCCChhhchhhhcc
Confidence 23457899999999876 45899999999999999999999999754311 11111111 00000
Q ss_pred cccchhhhcC------CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 560 EVFDVELLKY------QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 560 ~~~d~~l~~~------~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
..+++..... .........+.+++.+||+.||++|||++|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 232 PKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp TTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0001110000 0001122456788889999999999999999763
No 101
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.5e-38 Score=322.93 Aligned_cols=252 Identities=17% Similarity=0.203 Sum_probs=196.5
Q ss_pred hcccCcCCceEEEEEEE-cCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEE-eeCCceeEEEecCCCCc
Q 006884 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY-YSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~-~~~~~~~lv~e~~~~gs 416 (627)
.+.||+|+||.||+|+. .+++.||||++.... ....+.+|++++..+ +|++++..+..+ ...+..++||||+ +++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l-~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (296)
T 4hgt_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMM-QGGVGIPTIRWCGAEGDYNVMVMELL-GPS 90 (296)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHH-TTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred eeeecCCCCeEEEEEEEcCCCceEEEEeecccc-cchHHHHHHHHHHHh-cCCCCCCeeeeecCCCCceEEEEEcc-CCC
Confidence 47899999999999996 468899999865432 224578899999999 566655555444 6677789999999 999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe---cCCCCeEEeecccccccCCC--
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL---TQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl---~~~~~~ki~DfG~a~~~~~~-- 491 (627)
|.+++.... ..+++..+..++.|++.||.|||+++ |+||||||+|||+ +.++.+||+|||+++.....
T Consensus 91 L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~ 163 (296)
T 4hgt_A 91 LEDLFNFCS----RKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp HHHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred HHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence 999997542 35899999999999999999999998 9999999999999 78999999999999876432
Q ss_pred ---------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006884 492 ---------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 492 ---------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
....+|+.|+|||++.+..++.++||||||+++|||++|+.||..............+..........
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--- 240 (296)
T 4hgt_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIE--- 240 (296)
T ss_dssp CCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHH---
T ss_pred CccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhh---
Confidence 23457899999999999999999999999999999999999998765444333322221111100000
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
.. ... ....+.+++.+||+.+|++|||++++++.|+++...
T Consensus 241 --~~--~~~---~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~ 281 (296)
T 4hgt_A 241 --VL--CKG---YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp --HH--TTT---SCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred --hh--hcc---CCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence 00 001 123577888899999999999999999999998754
No 102
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=7.2e-39 Score=332.92 Aligned_cols=242 Identities=22% Similarity=0.344 Sum_probs=197.7
Q ss_pred hcccCcCCceEEEEEEE-cCCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+. .+++.||||++..... ..+.+.+|++++..+ +||||+++++++...+..++||||++
T Consensus 59 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~ 137 (348)
T 1u5q_A 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTAWLVMEYCL 137 (348)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred eeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCeEEEEEecCC
Confidence 46799999999999996 4789999999865422 235688999999999 99999999999999999999999997
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCC
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTT 493 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~ 493 (627)
|+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 138 -g~l~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~ 209 (348)
T 1u5q_A 138 -GSASDLLEVHK----KPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS 209 (348)
T ss_dssp -EEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCC
T ss_pred -CCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecCCCCc
Confidence 68888886542 36899999999999999999999998 99999999999999999999999999988876667
Q ss_pred CCCCccccCccccC---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 494 ATRTIGYRAPEVTE---TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 494 ~~~t~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
..+|+.|+|||++. ...++.++||||||+++|||++|+.||.... .............. ... ..
T Consensus 210 ~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~------~~~~~~~~~~~~~~-~~~------~~ 276 (348)
T 1u5q_A 210 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN------AMSALYHIAQNESP-ALQ------SG 276 (348)
T ss_dssp CCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHSCCC-CCC------CT
T ss_pred ccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHhcCCC-CCC------CC
Confidence 78999999999984 5678999999999999999999999997532 12222222222111 000 11
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~ 605 (627)
.. ...+.+++.+||+.+|++|||+++++++..
T Consensus 277 ~~---~~~l~~li~~~l~~dP~~Rps~~~ll~h~~ 308 (348)
T 1u5q_A 277 HW---SEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 308 (348)
T ss_dssp TS---CHHHHHHHHHHTCSSGGGSCCHHHHTTCHH
T ss_pred CC---CHHHHHHHHHHcccChhhCcCHHHHhhChh
Confidence 11 234667888999999999999999987543
No 103
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=6.1e-39 Score=333.00 Aligned_cols=255 Identities=25% Similarity=0.392 Sum_probs=201.6
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHh-ccCCceeceeeEEeeCC----ceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTI-GKHSNVVPVRAYYYSKD----EKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~~h~niv~~~~~~~~~~----~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.. ++.||||++... ..+.+.+|++++..+ .+||||+++++++.... ..++||||++
T Consensus 47 ~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~ 123 (342)
T 1b6c_B 47 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 123 (342)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEECGG--GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCT
T ss_pred EeeecCCCCcEEEEEEEc-CccEEEEEeCch--hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecC
Confidence 578999999999999985 899999998643 456778888888873 28999999999998776 7899999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeeecCCCCCCeEecCCCCeEEeecccc
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH--------SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA 485 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a 485 (627)
+|+|.+++... .+++..++.++.|++.||.||| +.+ |+||||||+||+++.++.+||+|||++
T Consensus 124 ~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~ 194 (342)
T 1b6c_B 124 HGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIADLGLA 194 (342)
T ss_dssp TCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCcHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEEECCCCCEEEEECCCc
Confidence 99999999753 4899999999999999999999 666 999999999999999999999999999
Q ss_pred cccCCC--------CCCCCCccccCccccCCCC------CCCcchhHHHHHHHHHHHhC----------CCCCCCCCCCC
Q 006884 486 HLINFP--------TTATRTIGYRAPEVTETRK------ASQKSDVYSFGVLLLEMLTG----------KAPLQHSGHDD 541 (627)
Q Consensus 486 ~~~~~~--------~~~~~t~~y~aPE~~~~~~------~~~~~Dv~S~Gvvl~el~tg----------~~pf~~~~~~~ 541 (627)
+..... ....+|+.|+|||++.+.. ++.++||||||+++|||++| +.||......+
T Consensus 195 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 274 (342)
T 1b6c_B 195 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 274 (342)
T ss_dssp EEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCc
Confidence 766432 2345889999999987652 33689999999999999999 67876543221
Q ss_pred CCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 542 VVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
.....+............ +. ......+....+.+++.+||+.+|++|||++|++++|+++.+..
T Consensus 275 -~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 275 -PSVEEMRKVVCEQKLRPN-IP----NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp -CCHHHHHHHHTTSCCCCC-CC----GGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred -ccHHHHHHHHHHHHhCCC-Cc----ccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 122222222222111111 11 11112355667889999999999999999999999999997653
No 104
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=3e-39 Score=331.54 Aligned_cols=249 Identities=20% Similarity=0.291 Sum_probs=193.2
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|++++.++.+||||+++++++.+.+..++||||+++|+|
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 98 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI 98 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcH
Confidence 57999999999999954 68999999987543 34678999999999876899999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC---eEEeecccccccCCC---
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN---GCISDVGLAHLINFP--- 491 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~---~ki~DfG~a~~~~~~--- 491 (627)
.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++. +||+|||+++.....
T Consensus 99 ~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 170 (316)
T 2ac3_A 99 LSHIHKR-----RHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC 170 (316)
T ss_dssp HHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC--------
T ss_pred HHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcc
Confidence 9999865 35899999999999999999999998 999999999999998776 999999998765321
Q ss_pred --------CCCCCCccccCccccCC-----CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCH--------HHHHH
Q 006884 492 --------TTATRTIGYRAPEVTET-----RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL--------PRWVR 550 (627)
Q Consensus 492 --------~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~--------~~~~~ 550 (627)
....+|+.|+|||++.+ ..++.++||||||+++|||++|+.||......+.... .....
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 250 (316)
T 2ac3_A 171 SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLF 250 (316)
T ss_dssp -----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHH
T ss_pred ccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHH
Confidence 12347899999999865 5688999999999999999999999987543321100 00011
Q ss_pred HHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 551 SVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 551 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
..+..... ....... ......+.+++.+||+.||++|||++|++++
T Consensus 251 ~~i~~~~~-~~~~~~~------~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 251 ESIQEGKY-EFPDKDW------AHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHCCC-CCCHHHH------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHhccCc-ccCchhc------ccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 11111110 0000000 0112457788899999999999999999873
No 105
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=5.7e-39 Score=336.43 Aligned_cols=245 Identities=14% Similarity=0.183 Sum_probs=198.1
Q ss_pred hcccCcCCceEEEEEE------EcCCcEEEEEEecccccCHHHHHHHHHHHHHhc--cCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAI------LEDGTTVVVKRLREVAATKREFEQQMEVVGTIG--KHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~--~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|+ ..+++.||||++.. ....++..|++++..+. .|+||+.+++++...+..++|||
T Consensus 70 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e 147 (365)
T 3e7e_A 70 HHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKP--ANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGE 147 (365)
T ss_dssp EEEEEECSSEEEEEEEC-------CCCCEEEEEESS--CCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEEC
T ss_pred EEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCC--CChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEe
Confidence 4689999999999994 44688999999864 35667888888888883 28999999999999999999999
Q ss_pred cCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC-----------CCCeEE
Q 006884 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ-----------DLNGCI 479 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~-----------~~~~ki 479 (627)
|+++|+|.+++...+......+++..++.++.|++.||+|||+.+ |+||||||+|||++. ++.+||
T Consensus 148 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl 224 (365)
T 3e7e_A 148 LYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDDEDDLSAGLAL 224 (365)
T ss_dssp CCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC------CTTEEE
T ss_pred ccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCccccccccCCEEE
Confidence 999999999998654434567999999999999999999999998 999999999999998 899999
Q ss_pred eecccccccCC------CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHh
Q 006884 480 SDVGLAHLINF------PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVV 553 (627)
Q Consensus 480 ~DfG~a~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 553 (627)
+|||+++.... .....||++|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 225 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~----------- 293 (365)
T 3e7e_A 225 IDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC----------- 293 (365)
T ss_dssp CCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE-----------
T ss_pred eeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce-----------
Confidence 99999975431 1345689999999999999999999999999999999999999864322110
Q ss_pred hhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCC-CCHHHHHHHHHhhccc
Q 006884 554 REEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSR-PKMDDVVRMIEQIQQP 610 (627)
Q Consensus 554 ~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~R-Ps~~ev~~~L~~~~~~ 610 (627)
.....+... ...+ .+.+++..|++.+|.+| |+++++.+.|+++...
T Consensus 294 -------~~~~~~~~~-~~~~---~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 294 -------KPEGLFRRL-PHLD---MWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp -------EECSCCTTC-SSHH---HHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred -------eechhcccc-CcHH---HHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 000001111 1122 34456778999999998 6888888888887654
No 106
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.7e-38 Score=335.71 Aligned_cols=260 Identities=22% Similarity=0.344 Sum_probs=197.6
Q ss_pred hcccCcC--CceEEEEEEEc-CCcEEEEEEecccccC---HHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecC
Q 006884 339 AEVLGKG--SYGSTYKAILE-DGTTVVVKRLREVAAT---KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 412 (627)
.+.||+| +||.||+++.+ +++.||||++...... .+.+.+|+++++.+ +||||+++++++.+.+..++||||+
T Consensus 30 ~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 108 (389)
T 3gni_B 30 LTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF-NHPNIVPYRATFIADNELWVVTSFM 108 (389)
T ss_dssp EEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhC-CCCCCCcEeEEEEECCEEEEEEEcc
Confidence 4789999 99999999976 6899999999765332 35678899999999 8999999999999999999999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC---
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN--- 489 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~--- 489 (627)
++|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||.+....
T Consensus 109 ~~~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~ 182 (389)
T 3gni_B 109 AYGSAKDLICTHF---MDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMISHG 182 (389)
T ss_dssp TTCBHHHHHHHTC---TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEECEETT
T ss_pred CCCCHHHHHhhhc---ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccceeecccc
Confidence 9999999998653 235899999999999999999999998 9999999999999999999999999875431
Q ss_pred --------CCCCCCCCccccCccccCC--CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhh----
Q 006884 490 --------FPTTATRTIGYRAPEVTET--RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVRE---- 555 (627)
Q Consensus 490 --------~~~~~~~t~~y~aPE~~~~--~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~---- 555 (627)
......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||......... ..........
T Consensus 183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~ 260 (389)
T 3gni_B 183 QRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML--LEKLNGTVPCLLDT 260 (389)
T ss_dssp EECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHH--HHC-----------
T ss_pred ccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH--HHHhcCCCCccccc
Confidence 1223457889999999987 67899999999999999999999999764432211 0000000000
Q ss_pred ------------------cccccccc--------hhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhh
Q 006884 556 ------------------EWTAEVFD--------VELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM--IEQI 607 (627)
Q Consensus 556 ------------------~~~~~~~d--------~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~--L~~~ 607 (627)
....+... ...............+.+++.+||+.||++|||++|++++ ++.+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~ 340 (389)
T 3gni_B 261 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 340 (389)
T ss_dssp ---------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC
T ss_pred cccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHH
Confidence 00000000 0000000111223457889999999999999999999874 4444
No 107
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=4.2e-39 Score=328.12 Aligned_cols=252 Identities=21% Similarity=0.330 Sum_probs=197.7
Q ss_pred hcccCcCCceEEEEEEE-----cCCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeC--CceeEEE
Q 006884 339 AEVLGKGSYGSTYKAIL-----EDGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSK--DEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~--~~~~lv~ 409 (627)
.+.||+|+||.||++++ .+++.||+|++.... ...+.+.+|++++..+ +||||+++++++... ...++||
T Consensus 26 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~ 104 (302)
T 4e5w_A 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL-YHENIVKYKGICTEDGGNGIKLIM 104 (302)
T ss_dssp EEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTC-CCTTBCCEEEEEEC---CCEEEEE
T ss_pred hhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhC-CCCCeeeeeeEEecCCCceEEEEE
Confidence 47899999999999984 368899999987542 3457899999999999 899999999999876 5689999
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||+++|+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 105 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 105 EFLPSGSLKEYLPKNK----NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp ECCTTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EeCCCCcHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECccccccccc
Confidence 9999999999997653 35899999999999999999999998 9999999999999999999999999998764
Q ss_pred CC-------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC--------CCCCCCHHHHHHHHhh
Q 006884 490 FP-------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSG--------HDDVVDLPRWVRSVVR 554 (627)
Q Consensus 490 ~~-------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~--------~~~~~~~~~~~~~~~~ 554 (627)
.. ....+|..|+|||++.+..++.++||||||+++|||++|+.|+.... ................
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLK 257 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHH
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHh
Confidence 33 23346778999999998899999999999999999999999864321 0000000000111111
Q ss_pred hcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhc
Q 006884 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQ 608 (627)
Q Consensus 555 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~ 608 (627)
.... ..........+.+++.+||+.||++|||++|+++.|+++.
T Consensus 258 ~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 258 EGKR----------LPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp TTCC----------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccCC----------CCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 1100 0011122346778889999999999999999999999875
No 108
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-38 Score=327.17 Aligned_cols=247 Identities=21% Similarity=0.431 Sum_probs=195.6
Q ss_pred hcccCcCCceEEEEEEEcC-----CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILED-----GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||.||+|..+. +..||||+++.... ....+.+|++++..+ +||||+++++++...+..++||||
T Consensus 49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~ 127 (333)
T 1mqb_A 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF-SHHNIIRLEGVISKYKPMMIITEY 127 (333)
T ss_dssp EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEEEEEC
T ss_pred ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEecCCCcEEEEeC
Confidence 4789999999999998653 23599999875432 345688999999999 999999999999999999999999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 491 (627)
+++|+|.+++... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 128 ~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 128 MENGALDKFLREK----DGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp CTTEEHHHHHHHT----TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred CCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 9999999999764 246899999999999999999999998 999999999999999999999999999876432
Q ss_pred C-------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006884 492 T-------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 492 ~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
. ...+|+.|+|||++.+..++.++||||||+++|||++ |+.||..... ......+.......
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~------~~~~~~~~~~~~~~---- 270 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN------HEVMKAINDGFRLP---- 270 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHHHTTCCCC----
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH------HHHHHHHHCCCcCC----
Confidence 1 1234678999999998899999999999999999999 9999975321 11111111111100
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 564 VELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
........+.+++.+||+.+|++||++.++++.|+++...
T Consensus 271 -------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 271 -------TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp -------CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred -------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0111234567888999999999999999999999998643
No 109
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=9.1e-39 Score=332.49 Aligned_cols=242 Identities=19% Similarity=0.318 Sum_probs=182.9
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
.+.||+|+||.||+|+.+ +++.||||+++... ..+.+.+|++++.++ +||||+++++++...+..++||||+++|+|
T Consensus 58 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 135 (349)
T 2w4o_A 58 ESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRL-SHPNIIKLKEIFETPTEISLVLELVTGGEL 135 (349)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhC-CCCCCcceeeeEecCCeEEEEEEeCCCCCH
Confidence 468999999999999976 57899999987543 456788999999999 899999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC---CCCeEEeecccccccCCC---
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ---DLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~---~~~~ki~DfG~a~~~~~~--- 491 (627)
.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 136 ~~~l~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~ 207 (349)
T 2w4o_A 136 FDRIVEK-----GYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLM 207 (349)
T ss_dssp HHHHTTC-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC-----------
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCccccccCccccc
Confidence 9999753 35899999999999999999999998 999999999999975 899999999999876433
Q ss_pred CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006884 492 TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ......+...... ... ..
T Consensus 208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~~~~i~~~~~~--~~~------~~ 274 (349)
T 2w4o_A 208 KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD-----QFMFRRILNCEYY--FIS------PW 274 (349)
T ss_dssp -----CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH-----HHHHHHHHTTCCC--CCT------TT
T ss_pred ccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc-----HHHHHHHHhCCCc--cCC------ch
Confidence 2345899999999999999999999999999999999999999753221 1112222211110 000 00
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
..+....+.+++.+||+.||++|||+.|++++
T Consensus 275 ~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 275 WDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11223456788889999999999999999873
No 110
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=5.8e-39 Score=333.71 Aligned_cols=239 Identities=23% Similarity=0.318 Sum_probs=196.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccc----ccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV----AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+++.+ +++.||+|+++.. ....+.+..|..++..+.+||||+++++++.+.+..++||||++
T Consensus 25 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 104 (353)
T 2i0e_A 25 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 104 (353)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCC
Confidence 478999999999999976 4789999999754 23456788899998888789999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC---
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF--- 490 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~--- 490 (627)
+|+|.+++.... .+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 105 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 176 (353)
T 2i0e_A 105 GGDLMYHIQQVG-----RFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 176 (353)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCcccccccCCc
Confidence 999999998642 5899999999999999999999998 99999999999999999999999999986422
Q ss_pred -CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 491 -PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 491 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+ .......+...... +.
T Consensus 177 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~------~~~~~~~i~~~~~~---~p------ 241 (353)
T 2i0e_A 177 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED------EDELFQSIMEHNVA---YP------ 241 (353)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCC---CC------
T ss_pred ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC------HHHHHHHHHhCCCC---CC------
Confidence 234568999999999999999999999999999999999999997532 12222222221110 00
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPK-----MDDVVRM 603 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs-----~~ev~~~ 603 (627)
.. ...++.+++.+||..+|++||+ ++|++++
T Consensus 242 ~~---~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 242 KS---MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp TT---SCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred CC---CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 11 1235667888999999999995 5777653
No 111
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=8.2e-39 Score=332.48 Aligned_cols=237 Identities=18% Similarity=0.225 Sum_probs=198.3
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+++.+ +|+.||+|++.... ...+.+.+|++++..+ +||||+++++++.+.+..++||||++
T Consensus 46 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 124 (350)
T 1rdq_E 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVA 124 (350)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCCEEEEEEcCCC
Confidence 478999999999999976 68999999986542 3456788999999999 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC-C
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-T 492 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-~ 492 (627)
+|+|.+++.... .+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 125 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~ 196 (350)
T 1rdq_E 125 GGEMFSHLRRIG-----RFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196 (350)
T ss_dssp TCBHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceeccCCcc
Confidence 999999998652 4899999999999999999999998 999999999999999999999999999876543 3
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006884 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
+..||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+...... + ..
T Consensus 197 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~------~~~~~~~i~~~~~~---~------p~-- 259 (350)
T 1rdq_E 197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ------PIQIYEKIVSGKVR---F------PS-- 259 (350)
T ss_dssp CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCC---C------CT--
T ss_pred cccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC------HHHHHHHHHcCCCC---C------CC--
Confidence 4568999999999999999999999999999999999999997532 12222222221110 0 01
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 006884 573 EEEMVQMLQIALSCVAKVPDSRPK-----MDDVVR 602 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~P~~RPs-----~~ev~~ 602 (627)
.....+.+++.+||+.||++||+ ++|+++
T Consensus 260 -~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 260 -HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp -TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred -CCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 11235677888999999999998 888876
No 112
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-38 Score=323.18 Aligned_cols=252 Identities=25% Similarity=0.376 Sum_probs=198.4
Q ss_pred hcccCcCCceEEEEEEEcC-C---cEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCce-eEEEec
Q 006884 339 AEVLGKGSYGSTYKAILED-G---TTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEK-LVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~-~lv~e~ 411 (627)
.+.||+|+||.||+|++.+ + ..||+|++..... ..+.+.+|++++..+ +||||+++++++.+.+.. ++|+||
T Consensus 26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~v~e~ 104 (298)
T 3pls_A 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGL-NHPNVLALIGIMLPPEGLPHVLLPY 104 (298)
T ss_dssp EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSSSCCEEEECC
T ss_pred CceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEecCCCCcEEEEec
Confidence 4789999999999998542 2 2799999875432 346788999999999 999999999999876665 899999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC-
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF- 490 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~- 490 (627)
+.+|+|.+++... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 105 ~~~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 105 MCHGDLLQFIRSP----QRNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp CTTCBHHHHHHCT----TCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred ccCCCHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 9999999999753 246899999999999999999999998 99999999999999999999999999975532
Q ss_pred -------CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006884 491 -------PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 491 -------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
.....+++.|+|||.+.+..++.++||||||+++|||++|..|+..... ...+...+ .......
T Consensus 178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~--~~~~~~~~----~~~~~~~--- 248 (298)
T 3pls_A 178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID--PFDLTHFL----AQGRRLP--- 248 (298)
T ss_dssp GGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC--GGGHHHHH----HTTCCCC---
T ss_pred cccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC--HHHHHHHh----hcCCCCC---
Confidence 1223467889999999999999999999999999999996655432211 11111111 1111000
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccccc
Q 006884 564 VELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRN 614 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~~~ 614 (627)
.. ......+.+++.+||+.+|.+|||++++++.|+++...-...
T Consensus 249 ----~~---~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~ 292 (298)
T 3pls_A 249 ----QP---EYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD 292 (298)
T ss_dssp ----CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSC
T ss_pred ----CC---ccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhcc
Confidence 00 111235678888999999999999999999999997665443
No 113
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=337.50 Aligned_cols=267 Identities=16% Similarity=0.250 Sum_probs=209.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCC--ceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD--EKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~--~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|++++..+ +||||+++++++...+ ..++||||++
T Consensus 14 ~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~~lv~e~~~ 92 (396)
T 4eut_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKNIVKLFAIEEETTTRHKVLIMEFCP 92 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECTTTCCEEEEECCCT
T ss_pred EEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCCCCeEEEeeccCCCCeeEEEEecCC
Confidence 478999999999999976 48999999997543 3467788999999999 8999999999998765 6799999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe----cCCCCeEEeecccccccC
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL----TQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl----~~~~~~ki~DfG~a~~~~ 489 (627)
+|+|.+++..... ...+++..++.++.|++.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++...
T Consensus 93 ~g~L~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~ 167 (396)
T 4eut_A 93 CGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (396)
T ss_dssp TEEHHHHTTSGGG--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred CCCHHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence 9999999986432 234899999999999999999999998 9999999999999 778889999999998764
Q ss_pred CC---CCCCCCccccCccccCC--------CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006884 490 FP---TTATRTIGYRAPEVTET--------RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 490 ~~---~~~~~t~~y~aPE~~~~--------~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
.. ....+|+.|+|||++.+ ..++.++||||||+++|||++|+.||....... ........+......
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~--~~~~~~~~~~~~~p~ 245 (396)
T 4eut_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR--RNKEVMYKIITGKPS 245 (396)
T ss_dssp CGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTT--TCHHHHHHHHHSCCT
T ss_pred CCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCccc--chHHHHHHHhcCCCc
Confidence 43 23458999999999864 567889999999999999999999997543322 112222333222111
Q ss_pred cccc------------chhhh-cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccccc
Q 006884 559 AEVF------------DVELL-KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELR 613 (627)
Q Consensus 559 ~~~~------------d~~l~-~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~~ 613 (627)
.... ...+. ...........+.+++.+||+.||++||++.|+++.++++....+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~~~ 313 (396)
T 4eut_A 246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRMVI 313 (396)
T ss_dssp TCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCEEE
T ss_pred ccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhceEE
Confidence 0000 00000 0112245566778899999999999999999999999998776553
No 114
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.5e-38 Score=322.68 Aligned_cols=250 Identities=20% Similarity=0.291 Sum_probs=191.6
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||+||+|+.+ +++.||||++..... ..+.+.+|++++.++ +||||+++++++.+++..++||||+++
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 85 (292)
T 3o0g_A 7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLTLVFEFCDQ 85 (292)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcC-CCCCEeeEEeEEEeCCEEEEEEecCCC
Confidence 468999999999999976 689999999875432 246788999999999 899999999999999999999999976
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
++.+++... ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 86 -~l~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 157 (292)
T 3o0g_A 86 -DLKKYFDSC----NGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC 157 (292)
T ss_dssp -EHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSC
T ss_pred -CHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCCcccc
Confidence 566665543 235899999999999999999999998 999999999999999999999999999876432
Q ss_pred -CCCCCCccccCccccCCCC-CCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhh---cccccc---cc
Q 006884 492 -TTATRTIGYRAPEVTETRK-ASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVRE---EWTAEV---FD 563 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~-~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~---~d 563 (627)
....+|+.|+|||++.+.. ++.++||||||+++|||++|..||.... +.......+... ...... ..
T Consensus 158 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~ 232 (292)
T 3o0g_A 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN-----DVDDQLKRIFRLLGTPTEEQWPSMTK 232 (292)
T ss_dssp CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCS-----SHHHHHHHHHHHHCCCCTTTCTTGGG
T ss_pred ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCC-----CHHHHHHHHHHHhCCCChhhhhhhcc
Confidence 3345789999999997765 7999999999999999999988864321 112222222110 000000 00
Q ss_pred -----------hhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 564 -----------VELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 564 -----------~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.........+.....+.+++.+||+.||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp STTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 000000011122345667888999999999999999976
No 115
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.6e-39 Score=336.17 Aligned_cols=252 Identities=25% Similarity=0.409 Sum_probs=192.9
Q ss_pred hcccCcCCceEEEEEEEcC----CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEee-CCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILED----GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYS-KDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~-~~~~~lv~e~ 411 (627)
.+.||+|+||.||+|++.+ +..||||.++.... ..+++.+|++++.++ +||||+++++++.. ++..++||||
T Consensus 94 ~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~lv~e~ 172 (373)
T 3c1x_A 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPY 172 (373)
T ss_dssp EEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTC-CCTTBCCCCEEECCCSSCCEEEEEC
T ss_pred CcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCCCeEEEEEC
Confidence 4689999999999998642 23689998865432 346789999999999 89999999998765 4577899999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 491 (627)
+++|+|.+++... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 173 ~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 173 MKHGDLRNFIRNE----THNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp CTTCBHHHHHHCT----TCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred CCCCCHHHHHhhc----ccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeecccccccccc
Confidence 9999999999754 245889999999999999999999998 999999999999999999999999999865322
Q ss_pred --------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006884 492 --------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 492 --------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
....+|+.|+|||++.+..++.++||||||+++|||++ |..||......+ ....+ ...... .
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~---~~~~~---~~~~~~---~ 316 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYL---LQGRRL---L 316 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC---HHHHH---HTTCCC---C
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH---HHHHH---HcCCCC---C
Confidence 12235678999999999999999999999999999999 677786543322 22111 111100 0
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccccccC
Q 006884 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRNR 615 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~~~~ 615 (627)
. .. .....+.+++.+||+.+|++|||+.|+++.|+++...-....
T Consensus 317 ~-----p~---~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~ 361 (373)
T 3c1x_A 317 Q-----PE---YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEH 361 (373)
T ss_dssp C-----CT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCC
T ss_pred C-----CC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccccc
Confidence 0 11 122356788889999999999999999999999976654443
No 116
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.7e-39 Score=329.71 Aligned_cols=247 Identities=21% Similarity=0.394 Sum_probs=194.0
Q ss_pred hcccCcCCceEEEEEEEc-CCcE----EEEEEeccc--ccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTT----VVVKRLREV--AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~--~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||.||+|++. +++. ||+|.+... ....+.+.+|++++..+ +||||+++++++... ..++|+||
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~-~~~~v~~~ 97 (327)
T 3lzb_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTS-TVQLITQL 97 (327)
T ss_dssp EEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTC-CBTTBCCCCEEEESS-SEEEEECC
T ss_pred EEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhC-CCCCeeEEEEEEecC-CceEEEEe
Confidence 478999999999999965 4443 577776543 23567899999999999 899999999998865 47899999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 491 (627)
+++|+|.+++.... ..+++..++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 98 ~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~ 170 (327)
T 3lzb_A 98 MPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp CSSCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred cCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence 99999999998653 35899999999999999999999998 999999999999999999999999999876432
Q ss_pred C------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006884 492 T------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 492 ~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
. ...+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+ +.. .+......
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~~----~~~~~~~~----- 238 (327)
T 3lzb_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISS----ILEKGERL----- 238 (327)
T ss_dssp ---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHH----HHHTTCCC-----
T ss_pred cccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HHH----HHHcCCCC-----
Confidence 1 2235678999999999999999999999999999999 999997653221 111 11111100
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
.........+.+++.+||+.+|++||++.|+++.|+++....
T Consensus 239 -----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 280 (327)
T 3lzb_A 239 -----PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp -----CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred -----CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence 001112235677889999999999999999999999987543
No 117
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=9.4e-39 Score=336.16 Aligned_cols=243 Identities=20% Similarity=0.353 Sum_probs=197.6
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
.+.||+|+||.||+|..+ +++.||+|++.... .....+.+|++++..+ +||||+++++++.+.+..++||||+++|+
T Consensus 56 ~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~lv~E~~~gg~ 134 (387)
T 1kob_A 56 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL-HHPKLINLHDAFEDKYEMVLILEFLSGGE 134 (387)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-CSTTBCCEEEEEECSSEEEEEEECCCCCB
T ss_pred EEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhC-CCcCCCeEEEEEEeCCEEEEEEEcCCCCc
Confidence 478999999999999976 68899999986543 2345788999999999 99999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC--CCCeEEeecccccccCCCC--
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ--DLNGCISDVGLAHLINFPT-- 492 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~--~~~~ki~DfG~a~~~~~~~-- 492 (627)
|.+++... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++. ++.+||+|||+++......
T Consensus 135 L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~ 207 (387)
T 1kob_A 135 LFDRIAAE----DYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 207 (387)
T ss_dssp HHHHTTCT----TCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred HHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceecCCCcce
Confidence 99998753 235899999999999999999999998 999999999999974 5779999999998765432
Q ss_pred -CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006884 493 -TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 493 -~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
...+|+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+....+. ++.. .
T Consensus 208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~------~~~~~~~i~~~~~~---~~~~-----~ 273 (387)
T 1kob_A 208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED------DLETLQNVKRCDWE---FDED-----A 273 (387)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS------HHHHHHHHHHCCCC---CCSS-----T
T ss_pred eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCC---CCcc-----c
Confidence 2458999999999999999999999999999999999999997532 11222222221111 0100 0
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
......++.+++.+||+.||++|||+.|++++
T Consensus 274 ~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 274 FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 11122356778889999999999999999874
No 118
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.9e-39 Score=357.06 Aligned_cols=244 Identities=20% Similarity=0.327 Sum_probs=198.2
Q ss_pred ccCcCCceEEEEEEEc---CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 341 VLGKGSYGSTYKAILE---DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 341 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.||+|+||.||+|.++ ++..||||+++... ...+++.+|++++..+ +||||+++++++.. +..++||||+++|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l-~hpniv~l~~~~~~-~~~~lv~E~~~~g 420 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLIGVCQA-EALMLVMEMAGGG 420 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTC-CCTTBCCEEEEEES-SSEEEEEECCTTC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhC-CCCCEeeEEEEecc-CCeEEEEEeCCCC
Confidence 6999999999999864 45679999997642 3568899999999999 99999999999875 5689999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC---
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT--- 492 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~--- 492 (627)
+|.+++... ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 421 ~L~~~l~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 493 (613)
T 2ozo_A 421 PLHKFLVGK----REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYY 493 (613)
T ss_dssp BHHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC------
T ss_pred cHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCcee
Confidence 999999754 346899999999999999999999998 9999999999999999999999999998764321
Q ss_pred ----CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006884 493 ----TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 493 ----~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
...+++.|+|||++.+..++.++|||||||++|||++ |+.||...... +.... +.......
T Consensus 494 ~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~------~~~~~-i~~~~~~~------- 559 (613)
T 2ozo_A 494 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP------EVMAF-IEQGKRME------- 559 (613)
T ss_dssp --------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH------HHHHH-HHTTCCCC-------
T ss_pred eeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH------HHHHH-HHcCCCCC-------
Confidence 1224578999999998999999999999999999998 99999864322 11111 11111100
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
........+.+++.+||+.+|++||++.+|++.|+.+...
T Consensus 560 ---~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 599 (613)
T 2ozo_A 560 ---CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 599 (613)
T ss_dssp ---CCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred ---CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 0112234677888999999999999999999999998544
No 119
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=7.5e-39 Score=327.38 Aligned_cols=252 Identities=21% Similarity=0.302 Sum_probs=192.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc------cCHHHHHHHHHHHHHhc--cCCceeceeeEEeeCC-----c
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA------ATKREFEQQMEVVGTIG--KHSNVVPVRAYYYSKD-----E 404 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~------~~~~~~~~e~~~l~~l~--~h~niv~~~~~~~~~~-----~ 404 (627)
.+.||+|+||.||+|+.. +++.||||++.... .....+.+|++++..+. +||||+++++++.... .
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~ 93 (308)
T 3g33_A 14 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIK 93 (308)
T ss_dssp EEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEE
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCcee
Confidence 478999999999999964 68999999986432 12356778888887774 4999999999998765 4
Q ss_pred eeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccc
Q 006884 405 KLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGL 484 (627)
Q Consensus 405 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~ 484 (627)
.++||||+. |+|.+++.... ...+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 94 ~~lv~e~~~-~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 166 (308)
T 3g33_A 94 VTLVFEHVD-QDLRTYLDKAP---PPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL 166 (308)
T ss_dssp EEEEEECCC-CBHHHHHHTCC---TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCEEECSCSC
T ss_pred EEEEehhhh-cCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEEeeCcc
Confidence 789999997 59999998653 234899999999999999999999998 99999999999999999999999999
Q ss_pred ccccCCCC---CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhh------
Q 006884 485 AHLINFPT---TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVRE------ 555 (627)
Q Consensus 485 a~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~------ 555 (627)
++...... ...+|+.|+|||++.+..++.++||||||+++|||++|+.||...... .....+...
T Consensus 167 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~------~~~~~i~~~~~~~~~ 240 (308)
T 3g33_A 167 ARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA------DQLGKIFDLIGLPPE 240 (308)
T ss_dssp TTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH------HHHHHHHHHHCCCCT
T ss_pred ccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHHhCCCCh
Confidence 98765432 345789999999999999999999999999999999999999754321 111111110
Q ss_pred -ccccccc--chhhhcC--CC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 556 -EWTAEVF--DVELLKY--QD----VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 556 -~~~~~~~--d~~l~~~--~~----~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.+..... ...+... .. .++....+.+++.+||+.||++|||+.|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 241 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp TTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 0000000 0000000 00 01122456788899999999999999999863
No 120
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=4.5e-39 Score=332.79 Aligned_cols=254 Identities=24% Similarity=0.384 Sum_probs=203.0
Q ss_pred hcccCcCCceEEEEEEEcC-C-----cEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILED-G-----TTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|.... + ..||+|.+..... ..+.+.+|++++..+.+||||+++++++...+..++|||
T Consensus 51 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 130 (333)
T 2i1m_A 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130 (333)
T ss_dssp EEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEe
Confidence 4789999999999999652 2 4799999875432 346789999999999889999999999999999999999
Q ss_pred cCCCCcHHHHhhhcCCC---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEee
Q 006884 411 YMPAGSLFMLLHRNRSD---------GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISD 481 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~---------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~D 481 (627)
|+++|+|.+++...... ....+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|
T Consensus 131 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~D 207 (333)
T 2i1m_A 131 YCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGD 207 (333)
T ss_dssp CCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCEEEGGGEEEBCC
T ss_pred cCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEEECCCCeEEECc
Confidence 99999999999754210 1235799999999999999999999998 99999999999999999999999
Q ss_pred cccccccCCCC------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhh
Q 006884 482 VGLAHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVR 554 (627)
Q Consensus 482 fG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~ 554 (627)
||+++...... ...+|+.|+|||++.+..++.++||||||+++|||++ |..||....... .......
T Consensus 208 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~------~~~~~~~ 281 (333)
T 2i1m_A 208 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS------KFYKLVK 281 (333)
T ss_dssp CGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH------HHHHHHH
T ss_pred cccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH------HHHHHHh
Confidence 99998653322 2335678999999988899999999999999999999 999997643221 1112222
Q ss_pred hcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 555 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
...... .. ......+.+++.+||+.+|.+|||+.|+++.|+++....
T Consensus 282 ~~~~~~-------~~---~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 328 (333)
T 2i1m_A 282 DGYQMA-------QP---AFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328 (333)
T ss_dssp HTCCCC-------CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cCCCCC-------CC---CCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence 211110 00 111235677888999999999999999999999986553
No 121
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=3e-38 Score=333.48 Aligned_cols=240 Identities=18% Similarity=0.291 Sum_probs=190.9
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEeccccc---CHHHHHHHHHHHHHhcc-CCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAA---TKREFEQQMEVVGTIGK-HSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~-h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||++...+++.||||++..... ..+.+.+|++++..+.. ||||+++++++...+..++||| +.+
T Consensus 61 ~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~ 139 (390)
T 2zmd_A 61 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 139 (390)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCS
T ss_pred EEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCC
Confidence 478999999999999988899999999865432 34678999999999953 6999999999999999999999 568
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++ ++.+||+|||+++.....
T Consensus 140 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 210 (390)
T 2zmd_A 140 IDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 210 (390)
T ss_dssp EEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc
Confidence 8999999864 25889999999999999999999998 99999999999995 589999999999876432
Q ss_pred ---CCCCCCccccCccccCC-----------CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcc
Q 006884 492 ---TTATRTIGYRAPEVTET-----------RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEW 557 (627)
Q Consensus 492 ---~~~~~t~~y~aPE~~~~-----------~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 557 (627)
....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... .....+..+.....
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-----~~~~~~~~~~~~~~ 285 (390)
T 2zmd_A 211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----NQISKLHAIIDPNH 285 (390)
T ss_dssp ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-----CHHHHHHHHHCTTS
T ss_pred ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh-----HHHHHHHHHhCccc
Confidence 23468999999999865 468899999999999999999999997532 11222222222111
Q ss_pred cccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 558 TAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 558 ~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.... .... ...+.+++.+||+.||++|||+.|++++
T Consensus 286 ~~~~-------~~~~---~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 286 EIEF-------PDIP---EKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp CCCC-------CCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cCCC-------Cccc---hHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 1000 0011 2356788889999999999999999874
No 122
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=4.6e-39 Score=333.42 Aligned_cols=243 Identities=22% Similarity=0.332 Sum_probs=193.2
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
.+.||+|+||.||++..+ +++.||||++..... ...+|++++.++.+||||+++++++.+.+..++||||+++|+|
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L 103 (342)
T 2qr7_A 27 KEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGEL 103 (342)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcH
Confidence 478999999999999976 688999999965432 3456788888887899999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC----CCeEEeecccccccCCC--
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD----LNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~----~~~ki~DfG~a~~~~~~-- 491 (627)
.+++... ..+++..+..++.|++.||.|||+++ |+||||||+|||+.++ +.+||+|||+++.....
T Consensus 104 ~~~i~~~-----~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~ 175 (342)
T 2qr7_A 104 LDKILRQ-----KFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG 175 (342)
T ss_dssp HHHHHTC-----TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC
T ss_pred HHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC
Confidence 9999754 35899999999999999999999998 9999999999998543 34999999999876432
Q ss_pred --CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 492 --TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
.+..+|+.|+|||++.+..++.++|||||||++|||++|+.||...... ........+....... ..
T Consensus 176 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~~~~~i~~~~~~~---~~----- 244 (342)
T 2qr7_A 176 LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD---TPEEILARIGSGKFSL---SG----- 244 (342)
T ss_dssp CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS---CHHHHHHHHHHCCCCC---CS-----
T ss_pred ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC---CHHHHHHHHccCCccc---Cc-----
Confidence 3456789999999998888999999999999999999999999754222 2222222222211110 00
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.........+.+++.+||..||++||++.|++++
T Consensus 245 ~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 245 GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0001122356678889999999999999999874
No 123
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.4e-38 Score=347.39 Aligned_cols=244 Identities=23% Similarity=0.310 Sum_probs=199.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccc----ccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV----AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+++.+ +|+.||+|++... ......+.+|++++..+ +||||+++++++.+.+..++||||++
T Consensus 189 ~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~~l~lVmEy~~ 267 (576)
T 2acx_A 189 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVLTLMN 267 (576)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHc-CCCCEeeEEEEEeeCCEEEEEEEcCC
Confidence 368999999999999976 6899999998653 23456788999999999 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|.+++.... ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 268 gg~L~~~l~~~~---~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~ 341 (576)
T 2acx_A 268 GGDLKFHIYHMG---QAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341 (576)
T ss_dssp SCBHHHHHHSSS---SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred CCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceecccCcc
Confidence 999999997542 235899999999999999999999998 999999999999999999999999999876543
Q ss_pred -CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 492 -TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
....||+.|+|||++.+..++.++|||||||++|||++|+.||....... .... +...+..... .+. .
T Consensus 342 ~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~--~~~~-i~~~i~~~~~--~~p------~ 410 (576)
T 2acx_A 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI--KREE-VERLVKEVPE--EYS------E 410 (576)
T ss_dssp EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC--CHHH-HHHHHHHCCC--CCC------T
T ss_pred ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch--hHHH-HHHHhhcccc--cCC------c
Confidence 23568999999999999899999999999999999999999998653321 1111 1111111100 000 1
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRP-----KMDDVVRM 603 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~ev~~~ 603 (627)
. ...++.+++.+||+.||++|| +++|++++
T Consensus 411 ~---~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 411 R---FSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp T---SCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred c---CCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 1 123566788899999999999 78888763
No 124
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3.7e-39 Score=331.12 Aligned_cols=263 Identities=21% Similarity=0.359 Sum_probs=190.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|..+ +++.||+|+++... ...+.+.+|++++..+ +||||+++++++...+..++||||++ |
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~-~ 87 (317)
T 2pmi_A 10 LEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL-KHENIVRLYDVIHTENKLTLVFEFMD-N 87 (317)
T ss_dssp ---------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTC-CBTTBCCEEEEECCTTEEEEEEECCC-C
T ss_pred eeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhc-CCCCcceEEEEEEECCeEEEEEEecC-C
Confidence 477999999999999965 68999999986542 2346788999999999 99999999999999999999999998 5
Q ss_pred cHHHHhhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006884 416 SLFMLLHRNRS-DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 416 sL~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
+|.+++..... .....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 88 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (317)
T 2pmi_A 88 DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNT 164 (317)
T ss_dssp BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCC
T ss_pred CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecCCCccc
Confidence 99999875432 12345899999999999999999999998 999999999999999999999999999876432
Q ss_pred -CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcc---cccc-----
Q 006884 492 -TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEW---TAEV----- 561 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~---~~~~----- 561 (627)
....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||......+ ....+........ ....
T Consensus 165 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~ 241 (317)
T 2pmi_A 165 FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE---QLKLIFDIMGTPNESLWPSVTKLPK 241 (317)
T ss_dssp CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCSCCTTTCGGGGGCTT
T ss_pred CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCCCChhHhhhhhhhhh
Confidence 23457899999999876 468999999999999999999999997543211 1111111110000 0000
Q ss_pred cchhhhc--CCCh---------HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhcc
Q 006884 562 FDVELLK--YQDV---------EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM--IEQIQQ 609 (627)
Q Consensus 562 ~d~~l~~--~~~~---------~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~--L~~~~~ 609 (627)
+...... .... .....++.+++.+||+.||++|||++|++++ +.+...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 302 (317)
T 2pmi_A 242 YNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYH 302 (317)
T ss_dssp CCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC
T ss_pred cccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccc
Confidence 0000000 0000 0112357788899999999999999999873 444433
No 125
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.4e-38 Score=328.07 Aligned_cols=237 Identities=20% Similarity=0.330 Sum_probs=187.7
Q ss_pred hcccCcCCceEEEEEEE----cCCcEEEEEEecccc-----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEE
Q 006884 339 AEVLGKGSYGSTYKAIL----EDGTTVVVKRLREVA-----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 409 (627)
.+.||+|+||.||+++. .+++.||+|+++... .....+.+|++++..+ +||||+++++++...+..++||
T Consensus 22 ~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~ 100 (327)
T 3a62_A 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV-KHPFIVDLIYAFQTGGKLYLIL 100 (327)
T ss_dssp EEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHC-CCTTBCCEEEEEECSSCEEEEE
T ss_pred EEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhC-CCCCccceeEEEEcCCEEEEEE
Confidence 47899999999999997 468999999987542 2345678899999999 8999999999999999999999
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||+++|+|.+++... ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 101 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 172 (327)
T 3a62_A 101 EYLSGGELFMQLERE-----GIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172 (327)
T ss_dssp ECCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred eCCCCCcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence 999999999999864 25889999999999999999999998 9999999999999999999999999997643
Q ss_pred C----CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchh
Q 006884 490 F----PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVE 565 (627)
Q Consensus 490 ~----~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 565 (627)
. .....||+.|+|||++.+..++.++||||||+++|||++|+.||.... .......+...... +
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~i~~~~~~---~--- 240 (327)
T 3a62_A 173 HDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN------RKKTIDKILKCKLN---L--- 240 (327)
T ss_dssp ------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHTCCC---C---
T ss_pred cCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhCCCC---C---
Confidence 2 234568999999999999999999999999999999999999997542 12222222221110 0
Q ss_pred hhcCCChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 006884 566 LLKYQDVEEEMVQMLQIALSCVAKVPDSRP-----KMDDVVR 602 (627)
Q Consensus 566 l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~ev~~ 602 (627)
... ....+.+++.+||+.+|++|| +++|+++
T Consensus 241 ---p~~---~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 241 ---PPY---LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp ---CTT---SCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred ---CCC---CCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 011 123566788899999999999 7788876
No 126
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=3.8e-39 Score=335.11 Aligned_cols=254 Identities=17% Similarity=0.246 Sum_probs=189.6
Q ss_pred hcccCcCCceEEEEEEEc----CCcEEEEEEeccccc------------CHHHHHHHHHHHHHhccCCceeceeeEEee-
Q 006884 339 AEVLGKGSYGSTYKAILE----DGTTVVVKRLREVAA------------TKREFEQQMEVVGTIGKHSNVVPVRAYYYS- 401 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~------------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~- 401 (627)
.+.||+|+||.||+|... ++..||||++..... ....+.+|+..+..+ +||||+++++++..
T Consensus 42 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-~h~ni~~~~~~~~~~ 120 (345)
T 2v62_A 42 GKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQL-DYLGIPLFYGSGLTE 120 (345)
T ss_dssp EEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTC-SCCCCCCEEEEEEEE
T ss_pred EeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccc-cccCcceeecccccc
Confidence 478999999999999975 578899999865321 123355677777777 99999999999987
Q ss_pred ---CCceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC--C
Q 006884 402 ---KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL--N 476 (627)
Q Consensus 402 ---~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~--~ 476 (627)
....++||||+ +++|.+++.... .+++..++.++.|++.||.|||+.+ |+||||||+|||++.++ .
T Consensus 121 ~~~~~~~~lv~e~~-~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 121 FKGRSYRFMVMERL-GIDLQKISGQNG-----TFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp SSSCEEEEEEEECE-EEEHHHHCBGGG-----BCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESSSTTS
T ss_pred cCCCcEEEEEEecc-CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccCCCCc
Confidence 67789999999 999999997642 6899999999999999999999998 99999999999999887 9
Q ss_pred eEEeecccccccCCC-----------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCH
Q 006884 477 GCISDVGLAHLINFP-----------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545 (627)
Q Consensus 477 ~ki~DfG~a~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~ 545 (627)
+||+|||+++..... ....+|+.|+|||++.+..++.++||||||+++|||++|+.||....... ..
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~--~~ 269 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP--VA 269 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH--HH
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc--HH
Confidence 999999999765321 23357899999999999899999999999999999999999996432111 00
Q ss_pred HHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006884 546 PRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 546 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 609 (627)
............ ................+.+++.+||+.+|++||++++|++.|+++.-
T Consensus 270 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 270 VQTAKTNLLDEL-----PQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHHHHTT-----THHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHHHHhhcccc-----cHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 111111111110 00000000000122357778889999999999999999999998764
No 127
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=4.7e-39 Score=343.05 Aligned_cols=244 Identities=18% Similarity=0.272 Sum_probs=194.3
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.++||+|+||+||+|+.+ +++.||+|++.... ...+.+.+|+.++..+ +||||++++++|.+.+..++||||++
T Consensus 79 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~~~~lV~Ey~~ 157 (437)
T 4aw2_A 79 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG-DSKWITTLHYAFQDDNNLYLVMDYYV 157 (437)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHS-CTTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeeCCEEEEEEecCC
Confidence 468999999999999977 47889999986532 2233488899999998 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|.+++... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 158 gg~L~~~l~~~----~~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~ 230 (437)
T 4aw2_A 158 GGDLLTLLSKF----EDRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 230 (437)
T ss_dssp TCBHHHHHHTT----TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred CCcHHHHHHHc----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcchhhhhhcccCCC
Confidence 99999999863 235899999999999999999999998 999999999999999999999999999766432
Q ss_pred ---CCCCCCccccCccccC-----CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006884 492 ---TTATRTIGYRAPEVTE-----TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 492 ---~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
....||+.|+|||++. ...++.++|||||||++|||++|+.||...+ ..+....+........ +.
T Consensus 231 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~------~~~~~~~i~~~~~~~~-~p 303 (437)
T 4aw2_A 231 VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES------LVETYGKIMNHKERFQ-FP 303 (437)
T ss_dssp EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHTHHHHCC-CC
T ss_pred cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCC------hhHHHHhhhhcccccc-CC
Confidence 2356899999999986 5678999999999999999999999997542 1222222221110000 00
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 006884 564 VELLKYQDVEEEMVQMLQIALSCVAKVPDS--RPKMDDVVRM 603 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~--RPs~~ev~~~ 603 (627)
. .....+ .++.+++.+|+..+|++ ||+++|++++
T Consensus 304 ~---~~~~~s---~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 304 T---QVTDVS---ENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp S---SCCCSC---HHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred c---ccccCC---HHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 0 001122 34566778999888887 9999999873
No 128
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.1e-38 Score=323.13 Aligned_cols=248 Identities=28% Similarity=0.446 Sum_probs=189.0
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccC---HHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAAT---KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|+.. ..||+|+++..... .+.+.+|++++..+ +||||+++++++ .....++||||++++
T Consensus 29 ~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~-~~~~~~lv~e~~~~~ 104 (289)
T 3og7_A 29 GQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGYS-TAPQLAIVTQWCEGS 104 (289)
T ss_dssp EEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEE-CSSSCEEEEECCCEE
T ss_pred eeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCcEEEEEeec-cCCccEEEEEecCCC
Confidence 478999999999999865 35999998754332 46688999999999 999999999965 556789999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~---- 491 (627)
+|.+++... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 105 ~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (289)
T 3og7_A 105 SLYHHLHAS----ETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH 177 (289)
T ss_dssp EHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC------------
T ss_pred cHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceeccccccccccc
Confidence 999999754 246899999999999999999999998 999999999999999999999999999765321
Q ss_pred --CCCCCCccccCccccC---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhh
Q 006884 492 --TTATRTIGYRAPEVTE---TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVEL 566 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 566 (627)
....+|+.|+|||++. +..++.++||||||+++|||++|+.||...... .. +............ .
T Consensus 178 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~-~~~~~~~~~~~~~----~ 247 (289)
T 3og7_A 178 QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-----DQ-IIEMVGRGSLSPD----L 247 (289)
T ss_dssp ------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH-----HH-HHHHHHHTSCCCC----T
T ss_pred cccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH-----HH-HHHHhcccccCcc----h
Confidence 2235789999999986 567888999999999999999999999754321 11 1122211111110 0
Q ss_pred hcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006884 567 LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 567 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 609 (627)
.. ........+.+++.+||+.+|++|||+.|+++.|+++..
T Consensus 248 ~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 248 SK--VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp TS--SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred hh--ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 00 011223467788889999999999999999999999864
No 129
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=8.8e-39 Score=327.89 Aligned_cols=254 Identities=26% Similarity=0.379 Sum_probs=202.2
Q ss_pred hcccCcCCceEEEEEEE------cCCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCC-ceeEEE
Q 006884 339 AEVLGKGSYGSTYKAIL------EDGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD-EKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~-~~~lv~ 409 (627)
.+.||+|+||.||+|+. .+++.||||++..... ..+.+.+|++++.++.+||||+++++++...+ ..++||
T Consensus 32 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~ 111 (316)
T 2xir_A 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 111 (316)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEE
T ss_pred eeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEE
Confidence 47899999999999984 2467899999976432 34578899999999988999999999988765 489999
Q ss_pred ecCCCCcHHHHhhhcCCCC-----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeE
Q 006884 410 SYMPAGSLFMLLHRNRSDG-----------GTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGC 478 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~-----------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~k 478 (627)
||+++|+|.+++....... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+|
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~k 188 (316)
T 2xir_A 112 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVK 188 (316)
T ss_dssp ECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEE
T ss_pred EcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEE
Confidence 9999999999998653210 123889999999999999999999998 99999999999999999999
Q ss_pred EeecccccccCCCC------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHH
Q 006884 479 ISDVGLAHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRS 551 (627)
Q Consensus 479 i~DfG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~ 551 (627)
|+|||+++...... ...+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+ ....
T Consensus 189 l~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~------~~~~ 262 (316)
T 2xir_A 189 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFCR 262 (316)
T ss_dssp ECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH------HHHH
T ss_pred ECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH------HHHH
Confidence 99999998764332 2235778999999999899999999999999999998 999997643221 1111
Q ss_pred HhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 552 VVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 552 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
.......... . ......+.+++.+||+.+|.+|||+.|++++|+.+.+..
T Consensus 263 ~~~~~~~~~~-------~---~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 263 RLKEGTRMRA-------P---DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp HHHHTCCCCC-------C---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HhccCccCCC-------C---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 1111111100 0 111235677888999999999999999999999987543
No 130
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=9.7e-39 Score=356.73 Aligned_cols=243 Identities=23% Similarity=0.329 Sum_probs=197.1
Q ss_pred cccCcCCceEEEEEEEc---CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 340 EVLGKGSYGSTYKAILE---DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
+.||+|+||.||+|.+. .++.||||+++.... ..+++.+|++++..+ +||||+++++++. .+..++||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~-~~~~~lv~E~~~ 452 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRMIGICE-AESWMLVMEMAE 452 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHC-CCTTBCCEEEEEE-SSSEEEEEECCT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEe-cCCEEEEEEccC
Confidence 47999999999999753 467899999976432 357899999999999 8999999999986 456889999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT- 492 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~- 492 (627)
+|+|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 453 ~g~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~ 524 (635)
T 4fl3_A 453 LGPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 524 (635)
T ss_dssp TEEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---
T ss_pred CCCHHHHHhhC-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCcc
Confidence 99999999754 35899999999999999999999998 9999999999999999999999999998764322
Q ss_pred ------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchh
Q 006884 493 ------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVE 565 (627)
Q Consensus 493 ------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 565 (627)
...+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... . +...+........
T Consensus 525 ~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~------~-~~~~i~~~~~~~~---- 593 (635)
T 4fl3_A 525 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS------E-VTAMLEKGERMGC---- 593 (635)
T ss_dssp ----------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH------H-HHHHHHTTCCCCC----
T ss_pred ccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH------H-HHHHHHcCCCCCC----
Confidence 1235678999999999999999999999999999998 99999764321 1 1111211111110
Q ss_pred hhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006884 566 LLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 566 l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 609 (627)
......++.+++.+||+.||++||++++|++.|+++..
T Consensus 594 ------p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 594 ------PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp ------CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred ------CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 11223467788899999999999999999999998754
No 131
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3e-38 Score=333.72 Aligned_cols=189 Identities=27% Similarity=0.432 Sum_probs=155.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCC--ceeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD--EKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~--~~~lv~e~~ 412 (627)
.+.||+|+||.||+|... +++.||||++..... ..+.+.+|+.++..+..||||+++++++...+ ..++||||+
T Consensus 14 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~ 93 (388)
T 3oz6_A 14 VKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM 93 (388)
T ss_dssp EEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECC
T ss_pred EEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEeccc
Confidence 478999999999999965 689999999865422 34567789999999966999999999997544 689999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC--
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF-- 490 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~-- 490 (627)
+ |+|..++... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 94 ~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 163 (388)
T 3oz6_A 94 E-TDLHAVIRAN------ILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163 (388)
T ss_dssp S-EEHHHHHHHT------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred C-cCHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence 7 5899998753 5899999999999999999999998 99999999999999999999999999976422
Q ss_pred -----------------------CCCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 006884 491 -----------------------PTTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHS 537 (627)
Q Consensus 491 -----------------------~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~ 537 (627)
.....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 234 (388)
T 3oz6_A 164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS 234 (388)
T ss_dssp CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence 122458899999999876 67899999999999999999999999864
No 132
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.8e-38 Score=328.26 Aligned_cols=240 Identities=19% Similarity=0.301 Sum_probs=189.0
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccC---HHHHHHHHHHHHHhccC-CceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAAT---KREFEQQMEVVGTIGKH-SNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h-~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||++...+++.||||++...... .+.+.+|++++..+.+| +||+++++++...+..++||| +.+
T Consensus 14 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~ 92 (343)
T 3dbq_A 14 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 92 (343)
T ss_dssp EEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CCS
T ss_pred EEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CCC
Confidence 4789999999999999888999999998754332 36788999999999433 999999999999999999999 568
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++ ++.+||+|||+++.....
T Consensus 93 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 163 (343)
T 3dbq_A 93 IDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 163 (343)
T ss_dssp EEHHHHHHHS-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCCC------
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeecccccccCccccc
Confidence 8999999864 35899999999999999999999998 99999999999997 678999999999876432
Q ss_pred ---CCCCCCccccCccccCC-----------CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcc
Q 006884 492 ---TTATRTIGYRAPEVTET-----------RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEW 557 (627)
Q Consensus 492 ---~~~~~t~~y~aPE~~~~-----------~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 557 (627)
....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... ..............
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~~~~~~~~ 238 (343)
T 3dbq_A 164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----NQISKLHAIIDPNH 238 (343)
T ss_dssp ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-----SHHHHHHHHHCTTS
T ss_pred ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh-----hHHHHHHHHhcCCc
Confidence 23458999999999864 678999999999999999999999997432 11122222221111
Q ss_pred cccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 558 TAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 558 ~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.... ... ....+.+++.+||+.||.+|||+.|++++
T Consensus 239 ~~~~-------~~~---~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 239 EIEF-------PDI---PEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp CCCC-------CCC---SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccCC-------ccc---CCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 1100 011 12356778889999999999999999875
No 133
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.8e-38 Score=321.59 Aligned_cols=252 Identities=20% Similarity=0.283 Sum_probs=193.6
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||++... +++.||+|++..... ..+.+.+|++++..+ +||||+++++++..++..++|+||++
T Consensus 39 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 117 (309)
T 2h34_A 39 RRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRL-QEPHVVPIHDFGEIDGQLYVDMRLIN 117 (309)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred EEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhc-CCCCeeEEEEEEeeCCeEEEEEEecC
Confidence 478999999999999976 688999999875432 236788999999999 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 118 ~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 189 (309)
T 2h34_A 118 GVDLAAMLRRQ-----GPLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASATTDEKL 189 (309)
T ss_dssp CEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC---------
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCcccccccc
Confidence 99999999864 35899999999999999999999998 999999999999999999999999998766432
Q ss_pred ---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006884 492 ---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 492 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
....+++.|+|||++.+..++.++||||||+++|||++|+.||..... ............ ... ..
T Consensus 190 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~~~~~~~----~~~-~~ 257 (309)
T 2h34_A 190 TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL-------SVMGAHINQAIP----RPS-TV 257 (309)
T ss_dssp -------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH-------HHHHHHHHSCCC----CGG-GT
T ss_pred ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH-------HHHHHHhccCCC----Ccc-cc
Confidence 234578999999999999999999999999999999999999975321 112222211111 000 00
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHhhccccccc
Q 006884 569 YQDVEEEMVQMLQIALSCVAKVPDSRP-KMDDVVRMIEQIQQPELRN 614 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~P~~RP-s~~ev~~~L~~~~~~~~~~ 614 (627)
... ....+.+++.+||+.+|++|| +++++++.|+++.......
T Consensus 258 ~~~---~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~~ 301 (309)
T 2h34_A 258 RPG---IPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQD 301 (309)
T ss_dssp STT---CCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-----
T ss_pred CCC---CCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhccc
Confidence 111 123566788899999999999 9999999999986655433
No 134
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=9.7e-39 Score=321.46 Aligned_cols=239 Identities=23% Similarity=0.398 Sum_probs=177.3
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.. +++.||+|++.... ...+.+.+|++++..+ +||||+++++++.+.+..++||||++
T Consensus 16 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 94 (278)
T 3cok_A 16 GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-KHPSILELYNYFEDSNYVYLVLEMCH 94 (278)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTB-CCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred eeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhC-CCCCeEeEEEEEccCCeEEEEEecCC
Confidence 468999999999999974 78999999986532 2346789999999999 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+++|.+++... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 95 ~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 167 (278)
T 3cok_A 95 NGEMNRYLKNR----VKPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE 167 (278)
T ss_dssp TEEHHHHHHTC----SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred CCcHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC
Confidence 99999999754 246899999999999999999999998 999999999999999999999999999876432
Q ss_pred --CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 492 --TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
....+|+.|+|||++.+..++.++||||||+++|||++|+.||......... ..... .. .. ..
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~------~~~~~----~~---~~--~~ 232 (278)
T 3cok_A 168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL------NKVVL----AD---YE--MP 232 (278)
T ss_dssp ------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------CCS----SC---CC--CC
T ss_pred cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH------HHHhh----cc---cC--Cc
Confidence 2345789999999999889999999999999999999999999764432211 00000 00 00 00
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
. ....++.+++.+||+.||++|||+++++++
T Consensus 233 ~---~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 233 S---FLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp T---TSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred c---ccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 1 112356778889999999999999999763
No 135
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.1e-38 Score=337.90 Aligned_cols=258 Identities=17% Similarity=0.276 Sum_probs=198.9
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhcc-------CCceeceeeEEe----eCCcee
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK-------HSNVVPVRAYYY----SKDEKL 406 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~-------h~niv~~~~~~~----~~~~~~ 406 (627)
.+.||+|+||.||+|+.. +++.||||++.......+.+.+|++++..+.. |+||+++++++. .....+
T Consensus 42 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~ 121 (397)
T 1wak_A 42 IRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHIC 121 (397)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEE
T ss_pred EEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEE
Confidence 478999999999999965 68899999997655556778999999999842 888999999987 455789
Q ss_pred EEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCCeEecCCC----------
Q 006884 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE-GGAKFTHGNIKSSNVLLTQDL---------- 475 (627)
Q Consensus 407 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dlkp~NILl~~~~---------- 475 (627)
+||||+ ++++.+++.... ...+++..+..++.|++.||.|||++ + |+||||||+|||++.++
T Consensus 122 lv~e~~-~~~l~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~~~~~~~~~~~ 194 (397)
T 1wak_A 122 MVFEVL-GHHLLKWIIKSN---YQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNEQYIRRLAAEA 194 (397)
T ss_dssp EEECCC-CCBHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCHHHHHHHHHHH
T ss_pred EEEecc-CccHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccchhhhhhhhhh
Confidence 999999 566666665432 24589999999999999999999998 7 99999999999999775
Q ss_pred ---------------------------------------CeEEeecccccccCCC-CCCCCCccccCccccCCCCCCCcc
Q 006884 476 ---------------------------------------NGCISDVGLAHLINFP-TTATRTIGYRAPEVTETRKASQKS 515 (627)
Q Consensus 476 ---------------------------------------~~ki~DfG~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~ 515 (627)
.+||+|||+++..... ....+|+.|+|||++.+..++.++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 274 (397)
T 1wak_A 195 TEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPA 274 (397)
T ss_dssp C---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHH
T ss_pred HHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHH
Confidence 8999999999876443 345689999999999999999999
Q ss_pred hhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhh---h---------cccccccch------------------h
Q 006884 516 DVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVR---E---------EWTAEVFDV------------------E 565 (627)
Q Consensus 516 Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~---~---------~~~~~~~d~------------------~ 565 (627)
|||||||++|||++|+.||......+..........+.. . ......+.. -
T Consensus 275 DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (397)
T 1wak_A 275 DIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVL 354 (397)
T ss_dssp HHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhh
Confidence 999999999999999999987554433211111111110 0 000000000 0
Q ss_pred hhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 566 LLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 566 l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
........+....+.+++.+||+.||++|||++|++++
T Consensus 355 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 355 VEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp HHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred hhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 01112235566788899999999999999999999863
No 136
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.7e-39 Score=340.02 Aligned_cols=243 Identities=17% Similarity=0.237 Sum_probs=193.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+++.+ +++.||+|++.+.. ...+.+.+|.+++..+ +||||+++++++.+.+..++||||++
T Consensus 66 ~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~~~~lVmE~~~ 144 (412)
T 2vd5_A 66 LKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNG-DRRWITQLHFAFQDENYLYLVMEYYV 144 (412)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHS-CTTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEeeCCEEEEEEcCCC
Confidence 468999999999999975 68999999996532 1233478899999988 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|.+++.+.. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 145 gg~L~~~l~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~ 217 (412)
T 2vd5_A 145 GGDLLTLLSKFG----ERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGT 217 (412)
T ss_dssp SCBHHHHHHHHS----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred CCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEeechhheeccCCCc
Confidence 999999998642 35899999999999999999999998 999999999999999999999999999876433
Q ss_pred ---CCCCCCccccCccccC-------CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccc
Q 006884 492 ---TTATRTIGYRAPEVTE-------TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEV 561 (627)
Q Consensus 492 ---~~~~~t~~y~aPE~~~-------~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (627)
....||+.|+|||++. +..++.++|||||||++|||++|+.||...+. ......+.........
T Consensus 218 ~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~------~~~~~~i~~~~~~~~~ 291 (412)
T 2vd5_A 218 VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST------AETYGKIVHYKEHLSL 291 (412)
T ss_dssp EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHTHHHHCCC
T ss_pred cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH------HHHHHHHHhcccCcCC
Confidence 2346899999999986 45789999999999999999999999975421 1222222211100000
Q ss_pred cchhhhcCCChHHHHHHHHHHHHHcccCCCCCC---CCHHHHHHH
Q 006884 562 FDVELLKYQDVEEEMVQMLQIALSCVAKVPDSR---PKMDDVVRM 603 (627)
Q Consensus 562 ~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~R---Ps~~ev~~~ 603 (627)
+.. ... ...++.+++.+||. +|++| |+++|++++
T Consensus 292 --p~~--~~~---~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 292 --PLV--DEG---VPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp --C------C---CCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred --Ccc--ccC---CCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 000 011 12356678889998 99998 699999773
No 137
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=3.6e-39 Score=332.71 Aligned_cols=256 Identities=23% Similarity=0.378 Sum_probs=199.0
Q ss_pred hcccCcCCceEEEEEEE-----cCCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEee--CCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAIL-----EDGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYS--KDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~--~~~~~lv~e 410 (627)
.+.||+|+||.||++++ .+++.||||++.... ...+.+.+|++++..+ +||||+++++++.. ....++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e 106 (327)
T 3lxl_A 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIVKYRGVSYGPGRQSLRLVME 106 (327)
T ss_dssp EEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSSCEEEEEEE
T ss_pred hhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCCceEEEEEe
Confidence 47899999999999984 358899999987543 2346689999999999 99999999999874 456889999
Q ss_pred cCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC
Q 006884 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF 490 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 490 (627)
|+++|+|.+++.... ..+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 107 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 179 (327)
T 3lxl_A 107 YLPSGCLRDFLQRHR----ARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPL 179 (327)
T ss_dssp CCTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred ecCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence 999999999998643 25899999999999999999999998 99999999999999999999999999987643
Q ss_pred CC-------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCC--------CCCCHHHHHHHHhhh
Q 006884 491 PT-------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHD--------DVVDLPRWVRSVVRE 555 (627)
Q Consensus 491 ~~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~--------~~~~~~~~~~~~~~~ 555 (627)
.. ...+|+.|+|||++.+..++.++||||||+++|||++|+.||...... ...............
T Consensus 180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (327)
T 3lxl_A 180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEE 259 (327)
T ss_dssp TCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHT
T ss_pred CCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhc
Confidence 22 234677899999999888999999999999999999999998642110 000001111111111
Q ss_pred cccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006884 556 EWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 556 ~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~ 612 (627)
... ..........+.+++.+||+.+|++|||+.|++++|+.+.....
T Consensus 260 ~~~----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 306 (327)
T 3lxl_A 260 GQR----------LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306 (327)
T ss_dssp TCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred ccC----------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 110 01112223457788889999999999999999999999866544
No 138
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.2e-38 Score=327.98 Aligned_cols=242 Identities=19% Similarity=0.352 Sum_probs=198.3
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc-------CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA-------TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+++.. +++.||+|++..... ..+.+.+|++++..+ +||||+++++++.+.+..++|||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e 95 (321)
T 2a2a_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-LHHNVITLHDVYENRTDVVLILE 95 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEC
T ss_pred eeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCEEEEEEE
Confidence 578999999999999976 689999999875422 367899999999999 89999999999999999999999
Q ss_pred cCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC----CeEEeeccccc
Q 006884 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL----NGCISDVGLAH 486 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~----~~ki~DfG~a~ 486 (627)
|+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++ .+||+|||+++
T Consensus 96 ~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~ 167 (321)
T 2a2a_A 96 LVSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (321)
T ss_dssp CCCSCBHHHHHHTC-----SCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred cCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence 99999999999753 35899999999999999999999998 99999999999999888 79999999998
Q ss_pred ccCCC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006884 487 LINFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 487 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
..... ....+|+.|+|||++.+..++.++||||||+++|||++|+.||..... ......+..... .++
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~i~~~~~---~~~ 238 (321)
T 2a2a_A 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK------QETLANITSVSY---DFD 238 (321)
T ss_dssp ECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHHTTCC---CCC
T ss_pred ecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhccc---ccC
Confidence 76543 234588999999999999999999999999999999999999975321 122222211110 011
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 564 VELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.... ......+.+++.+||..||++|||++|++++
T Consensus 239 ~~~~-----~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 239 EEFF-----SHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp HHHH-----TTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred hhhh-----cccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1110 0112356778889999999999999999873
No 139
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=2.6e-38 Score=321.70 Aligned_cols=248 Identities=25% Similarity=0.409 Sum_probs=195.5
Q ss_pred hcccCcCCceEEEEEEEcC----CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEee-CCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILED----GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYS-KDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~-~~~~~lv~e~ 411 (627)
.+.||+|+||.||+|+..+ ...||+|.+..... ..+.+.+|+++++++ +||||+++++++.. ++..++||||
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~v~e~ 108 (298)
T 3f66_A 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPY 108 (298)
T ss_dssp EEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSSSCCEEEEEC
T ss_pred cceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhC-CCCCEeeeeeEEEcCCCceEEEEeC
Confidence 4789999999999998643 23589998875432 346788999999999 89999999998654 5577899999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 491 (627)
+++|+|.+++... ...+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 109 ~~~~~L~~~l~~~----~~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 109 MKHGDLRNFIRNE----THNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp CTTCBHHHHHHCT----TCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred CCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECccccccccccc
Confidence 9999999999753 245899999999999999999999998 999999999999999999999999999865332
Q ss_pred --------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006884 492 --------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 492 --------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
....+|+.|+|||.+.+..++.++||||||+++|||++ |.+||......+ .... ....... .
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~---~~~~---~~~~~~~---~ 252 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVY---LLQGRRL---L 252 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT---HHHH---HHTTCCC---C
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH---HHHH---HhcCCCC---C
Confidence 22345778999999999999999999999999999999 556665443221 1111 1111100 0
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
. ... ....+.+++.+||+.+|++|||++|+++.|+++...-
T Consensus 253 ~-----~~~---~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 293 (298)
T 3f66_A 253 Q-----PEY---CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 293 (298)
T ss_dssp C-----CTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred C-----Ccc---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 0 011 1235678888999999999999999999999987643
No 140
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=8.6e-39 Score=322.67 Aligned_cols=242 Identities=21% Similarity=0.408 Sum_probs=197.1
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEee----------------
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS---------------- 401 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~---------------- 401 (627)
.+.||+|+||.||+|+.. +++.||+|++.... +.+.+|++++..+ +||||+++++++..
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (284)
T 2a19_B 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKL-DHVNIVHYNGCWDGFDYDPETSSKNSSRSK 91 (284)
T ss_dssp EEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHC-CCTTBCCEEEEEEEEEEC---------CCE
T ss_pred eeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhC-CCCCEEEEeeeEeccccCcccccccccccC
Confidence 478999999999999976 78999999986532 4577899999999 99999999998864
Q ss_pred CCceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEee
Q 006884 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISD 481 (627)
Q Consensus 402 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~D 481 (627)
....++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|
T Consensus 92 ~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~D 165 (284)
T 2a19_B 92 TKCLFIQMEFCDKGTLEQWIEKRR---GEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGD 165 (284)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHGG---GSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECC
T ss_pred cceEEEEEeccCCCCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCCCCEEECc
Confidence 345789999999999999997643 246899999999999999999999998 99999999999999999999999
Q ss_pred cccccccCCC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006884 482 VGLAHLINFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 482 fG~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
||+++..... ....+++.|+|||++.+..++.++||||||+++|||++|..|+... ...... ......
T Consensus 166 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--------~~~~~~-~~~~~~ 236 (284)
T 2a19_B 166 FGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--------SKFFTD-LRDGII 236 (284)
T ss_dssp CTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--------HHHHHH-HHTTCC
T ss_pred chhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH--------HHHHHH-hhcccc
Confidence 9999876443 3345789999999999989999999999999999999999886421 111111 111111
Q ss_pred ccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006884 559 AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 559 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~ 612 (627)
... ....+.+++.+||+.+|++|||+.|++++|+.++...-
T Consensus 237 ~~~-------------~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 237 SDI-------------FDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp CTT-------------SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred ccc-------------CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 111 11245678889999999999999999999999976543
No 141
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.2e-38 Score=319.38 Aligned_cols=246 Identities=21% Similarity=0.366 Sum_probs=196.8
Q ss_pred hcccCcCCceEEEEEEEcC----CcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAILED----GTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 412 (627)
.+.||+|+||.||+|++.+ +..||+|.+.... ...+.+.+|++++..+ +||||+++++++.+ +..++||||+
T Consensus 17 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~-~~~~~v~e~~ 94 (281)
T 3cc6_A 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL-DHPHIVKLIGIIEE-EPTWIIMELY 94 (281)
T ss_dssp EEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHH-CCTTBCCEEEEECS-SSCEEEEECC
T ss_pred EEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhC-CCCCcceEEEEEcC-CCCEEEEecC
Confidence 4789999999999998643 2369999987542 2456789999999999 99999999999764 4568999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC-
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP- 491 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~- 491 (627)
++++|.+++.... ..+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 95 ~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 167 (281)
T 3cc6_A 95 PYGELGHYLERNK----NSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDED 167 (281)
T ss_dssp TTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGCC----
T ss_pred CCCCHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCccccccc
Confidence 9999999997652 35899999999999999999999998 999999999999999999999999999876432
Q ss_pred ----CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhh
Q 006884 492 ----TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVEL 566 (627)
Q Consensus 492 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 566 (627)
....+++.|+|||++.+..++.++||||||+++|||++ |+.||......+ .... ....... .
T Consensus 168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~---~~~~---~~~~~~~-~------ 234 (281)
T 3cc6_A 168 YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD---VIGV---LEKGDRL-P------ 234 (281)
T ss_dssp -----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG---HHHH---HHHTCCC-C------
T ss_pred ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH---HHHH---HhcCCCC-C------
Confidence 22345778999999988899999999999999999998 999997543221 1111 1111100 0
Q ss_pred hcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 567 LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 567 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
.. ......+.+++.+||+.+|++|||+.|+++.|+++.+.
T Consensus 235 -~~---~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 235 -KP---DLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp -CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -CC---CCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 00 11123567788899999999999999999999998654
No 142
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.2e-38 Score=327.31 Aligned_cols=253 Identities=22% Similarity=0.364 Sum_probs=200.0
Q ss_pred hcccCcCCceEEEEEEEc-----CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeC--CceeEEE
Q 006884 339 AEVLGKGSYGSTYKAILE-----DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSK--DEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~--~~~~lv~ 409 (627)
.+.||+|+||.||++.++ +++.||||++.... ...+.+.+|++++..+ +||||+++++++.+. ...++||
T Consensus 36 ~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~ 114 (318)
T 3lxp_A 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL-YHEHIIKYKGCCEDAGAASLQLVM 114 (318)
T ss_dssp EEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTTTEEEEEE
T ss_pred hheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhC-CCcchhhEEEEEecCCCceEEEEE
Confidence 478999999999998753 57899999997643 2346789999999999 899999999999874 5678999
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||+++|+|.+++... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 115 e~~~~~~L~~~l~~~------~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 115 EYVPLGSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp CCCTTCBHHHHGGGS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred ecccCCcHHHHHhhC------CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 999999999999754 3899999999999999999999998 9999999999999999999999999998764
Q ss_pred CCC-------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCC-----CCCC-HH--HHHHHHhh
Q 006884 490 FPT-------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHD-----DVVD-LP--RWVRSVVR 554 (627)
Q Consensus 490 ~~~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~-----~~~~-~~--~~~~~~~~ 554 (627)
... ...+|..|+|||++.+..++.++||||||+++|||++|+.||...... .... .. ........
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh
Confidence 422 234677899999999888999999999999999999999998642110 0000 00 00000010
Q ss_pred hcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 555 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
... ...........+.+++.+||+.+|++|||++|+++.|+.+.+.-
T Consensus 266 ~~~----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 312 (318)
T 3lxp_A 266 RGE----------RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 312 (318)
T ss_dssp TTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ccc----------CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence 000 00111222346778889999999999999999999999987553
No 143
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=2.9e-39 Score=339.37 Aligned_cols=247 Identities=10% Similarity=0.032 Sum_probs=178.3
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhc-cCCceecee-------eEEeeC---
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIG-KHSNVVPVR-------AYYYSK--- 402 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~-~h~niv~~~-------~~~~~~--- 402 (627)
.+.||+|+||.||+|++. +++.||||++..... ..+.+.+|++++..+. +||||++++ +.+...
T Consensus 67 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~ 146 (371)
T 3q60_A 67 VEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQP 146 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSC
T ss_pred eeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCC
Confidence 478999999999999965 789999999986432 3456778877777774 599988754 444332
Q ss_pred --------------CceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHH------HHHHHHHHHHHHHHHhcCCCCeeec
Q 006884 403 --------------DEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSR------MKIALGTARGIAFIHSEGGAKFTHG 462 (627)
Q Consensus 403 --------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~------~~i~~~ia~~l~~LH~~~~~~ivH~ 462 (627)
...++||||++ |+|.+++.... ..+++..+ ..++.|++.||+|||+++ |+||
T Consensus 147 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~----~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~---ivHr 218 (371)
T 3q60_A 147 PFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD----FVYVFRGDEGILALHILTAQLIRLAANLQSKG---LVHG 218 (371)
T ss_dssp SSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH----HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT---EEET
T ss_pred CeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc----cccchhhhhhhhhHHHHHHHHHHHHHHHHHCC---CccC
Confidence 23799999998 89999998642 13455555 788899999999999998 9999
Q ss_pred CCCCCCeEecCCCCeEEeecccccccCCCC-CCCCCccccCccccCC--CCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 006884 463 NIKSSNVLLTQDLNGCISDVGLAHLINFPT-TATRTIGYRAPEVTET--RKASQKSDVYSFGVLLLEMLTGKAPLQHSGH 539 (627)
Q Consensus 463 Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~-~~~~t~~y~aPE~~~~--~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~ 539 (627)
||||+|||++.++.+||+|||+++...... ...+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 219 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~ 298 (371)
T 3q60_A 219 HFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTP 298 (371)
T ss_dssp TCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCT
T ss_pred cCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCc
Confidence 999999999999999999999998776544 4557799999999987 7899999999999999999999999986533
Q ss_pred CCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 540 DDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
...... ............. ...........+.+++.+||+.||++|||+.|+++
T Consensus 299 ~~~~~~--------~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 299 GIKGSW--------KRPSLRVPGTDSL-AFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TCTTCC--------CBCCTTSCCCCSC-CCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred ccccch--------hhhhhhhcccccc-chhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 211100 0000000000000 00101122345677888999999999999999986
No 144
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=3.1e-38 Score=325.74 Aligned_cols=253 Identities=23% Similarity=0.435 Sum_probs=200.3
Q ss_pred hcccCcCCceEEEEEEEc-CCcE--EEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTT--VVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~--vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.. ++.. ||+|.++... ...+.+.+|++++.++.+||||+++++++.+.+..++||||++
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~ 109 (327)
T 1fvr_A 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 109 (327)
T ss_dssp EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred eeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCC
Confidence 478999999999999965 4554 4999886532 2446789999999999889999999999999999999999999
Q ss_pred CCcHHHHhhhcC-----------CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeec
Q 006884 414 AGSLFMLLHRNR-----------SDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDV 482 (627)
Q Consensus 414 ~gsL~~~l~~~~-----------~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~Df 482 (627)
+|+|.+++.... ......+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+||
T Consensus 110 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kL~Df 186 (327)
T 1fvr_A 110 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADF 186 (327)
T ss_dssp TCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCT
T ss_pred CCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCeEEEccc
Confidence 999999997643 012346899999999999999999999998 999999999999999999999999
Q ss_pred ccccccCC---CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006884 483 GLAHLINF---PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 483 G~a~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
|+++.... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ......+. ....
T Consensus 187 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~------~~~~~~~~-~~~~ 259 (327)
T 1fvr_A 187 GLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC------AELYEKLP-QGYR 259 (327)
T ss_dssp TCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHGG-GTCC
T ss_pred CcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH------HHHHHHhh-cCCC
Confidence 99875432 223345788999999988889999999999999999998 9999975421 12222211 1110
Q ss_pred ccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 559 AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 559 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
.. .. ......+.+++.+||+.+|++|||++|+++.|+++....
T Consensus 260 ~~-------~~---~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 302 (327)
T 1fvr_A 260 LE-------KP---LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 302 (327)
T ss_dssp CC-------CC---TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred CC-------CC---CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence 00 01 112235677888999999999999999999999986654
No 145
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=5.8e-38 Score=317.14 Aligned_cols=243 Identities=24% Similarity=0.360 Sum_probs=191.6
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||++... ++..||+|++.... ...+.+.+|++++..+ +||||+++++++.+.+..++||||+++|
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 105 (285)
T 3is5_A 27 KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSL-DHPNIIKIFEVFEDYHNMYIVMETCEGG 105 (285)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCSCC
T ss_pred cceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhC-CCchHHhHHHheecCCeEEEEEEeCCCC
Confidence 478999999999999975 68899999987653 3468899999999999 9999999999999999999999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe---cCCCCeEEeecccccccCCC-
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL---TQDLNGCISDVGLAHLINFP- 491 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl---~~~~~~ki~DfG~a~~~~~~- 491 (627)
+|.+++..... ....+++..+..++.|++.||.|||+.+ |+||||||+||++ +.++.+||+|||+++.....
T Consensus 106 ~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (285)
T 3is5_A 106 ELLERIVSAQA-RGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE 181 (285)
T ss_dssp BHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred cHHHHHHhhhh-cccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc
Confidence 99999865321 1246899999999999999999999998 9999999999999 45688999999999875432
Q ss_pred --CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 492 --TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
....+|+.|+|||++. ..++.++||||||+++|||++|+.||.... ................. . .
T Consensus 182 ~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~------~~~~~~~~~~~~~~~~~---~---~ 248 (285)
T 3is5_A 182 HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTS------LEEVQQKATYKEPNYAV---E---C 248 (285)
T ss_dssp -----CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCCCCC--------
T ss_pred cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCC------HHHHHhhhccCCccccc---c---c
Confidence 3345789999999986 468999999999999999999999997542 11111111111110000 0 0
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.. ....+.+++.+||+.||++|||++|+++
T Consensus 249 ~~---~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 249 RP---LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp CC---CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred Cc---CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 01 1235667888999999999999999976
No 146
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=329.57 Aligned_cols=248 Identities=21% Similarity=0.329 Sum_probs=182.6
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEee--------CCceeEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYS--------KDEKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~--------~~~~~lv 408 (627)
.+.||+|+||.||+++.. +++.||||++.... ...+.+.+|+.++.++.+||||+++++++.. ....++|
T Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv 112 (337)
T 3ll6_A 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLL 112 (337)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEE
T ss_pred EEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEE
Confidence 478999999999999965 68999999885543 2356788999999999669999999999842 3347899
Q ss_pred EecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 409 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
+||+. |+|.+++..... ...+++..++.++.|++.||.|||+.+ ++|+||||||+|||++.++.+||+|||+++..
T Consensus 113 ~e~~~-g~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 188 (337)
T 3ll6_A 113 TELCK-GQLVEFLKKMES--RGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFGSATTI 188 (337)
T ss_dssp EECCS-EEHHHHHHHHHT--TCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCCTTCBCC
T ss_pred EEecC-CCHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecCccceec
Confidence 99995 799999876332 246999999999999999999999975 56999999999999999999999999999876
Q ss_pred CCCC----------------CCCCCccccCcccc---CCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHH
Q 006884 489 NFPT----------------TATRTIGYRAPEVT---ETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWV 549 (627)
Q Consensus 489 ~~~~----------------~~~~t~~y~aPE~~---~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~ 549 (627)
.... ...+|+.|+|||++ .+..++.++||||||+++|||++|+.||........
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~------- 261 (337)
T 3ll6_A 189 SHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI------- 261 (337)
T ss_dssp SSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------------
T ss_pred cccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh-------
Confidence 4321 23478899999998 566789999999999999999999999975322111
Q ss_pred HHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 550 RSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 550 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
....... . ... .....+.+++.+||+.+|++|||+.|+++.|+++...
T Consensus 262 ---~~~~~~~---~----~~~---~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~ 309 (337)
T 3ll6_A 262 ---VNGKYSI---P----PHD---TQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAA 309 (337)
T ss_dssp -------CCC---C----TTC---CSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---hcCcccC---C----ccc---ccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 0000000 0 000 0112356788899999999999999999999998654
No 147
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=3e-38 Score=340.81 Aligned_cols=252 Identities=19% Similarity=0.246 Sum_probs=200.2
Q ss_pred hcccCcCCceEEEEEEE-cCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
.+.||+|+||.||+|+. .+++.||||++.... ...++..|++++..+.+|+++..+..++...+..++||||+ +++|
T Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL 89 (483)
T 3sv0_A 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSL 89 (483)
T ss_dssp CCCCEECSSCEEEEEEETTTCCEEEEEEEETTC-SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEEeeCCCEEEEEEEECCCCcEEEEEEecccc-ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCH
Confidence 47899999999999996 468999999876432 33458889999999966677777777778888899999999 9999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe---cCCCCeEEeecccccccCCCC--
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL---TQDLNGCISDVGLAHLINFPT-- 492 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl---~~~~~~ki~DfG~a~~~~~~~-- 492 (627)
.+++.... ..+++..++.++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+++......
T Consensus 90 ~~ll~~~~----~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (483)
T 3sv0_A 90 EDLFNFCS----RKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTH 162 (483)
T ss_dssp HHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred HHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccc
Confidence 99998542 35999999999999999999999998 9999999999999 688999999999998764322
Q ss_pred ---------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006884 493 ---------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 493 ---------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
...||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+..+...... ....
T Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~---~~~~~i~~~~~~-~~~~ 238 (483)
T 3sv0_A 163 QHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK---QKYEKISEKKVA-TSIE 238 (483)
T ss_dssp CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHH---HHHHHHHHHHHH-SCHH
T ss_pred cccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHH---HHHHHHhhcccc-ccHH
Confidence 345789999999999999999999999999999999999999875443221 112111111110 0000
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006884 564 VELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 609 (627)
.+. . ....++.+++..||+.+|++||++++|++.|+++..
T Consensus 239 -~l~--~---~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 239 -ALC--R---GYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp -HHH--T---TSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred -HHh--c---CCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 000 0 112467788899999999999999999999999854
No 148
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.7e-38 Score=320.51 Aligned_cols=253 Identities=20% Similarity=0.368 Sum_probs=201.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc-------cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-------ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-------~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+++.. +++.||+|+++... ...+.+.+|++++..+ +||||+++++++...+..++|||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e 88 (283)
T 3bhy_A 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI-RHPNIITLHDIFENKTDVVLILE 88 (283)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEE
T ss_pred HHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhC-CCCCeeehhheecCCCeEEEEEe
Confidence 478999999999999976 68999999986542 1367899999999999 89999999999999999999999
Q ss_pred cCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC----CeEEeeccccc
Q 006884 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL----NGCISDVGLAH 486 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~----~~ki~DfG~a~ 486 (627)
|+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++ .+||+|||.+.
T Consensus 89 ~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 89 LVSGGELFDFLAEK-----ESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp CCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred ecCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 99999999999764 35899999999999999999999998 99999999999998877 89999999998
Q ss_pred ccCCC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006884 487 LINFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 487 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
..... ....+++.|+|||++.+..++.++||||||+++|||++|+.||..... ......+..... ..+
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~---~~~ 231 (283)
T 3bhy_A 161 KIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK------QETLTNISAVNY---DFD 231 (283)
T ss_dssp ECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHTTCC---CCC
T ss_pred eccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch------HHHHHHhHhccc---CCc
Confidence 76433 234578999999999999999999999999999999999999975421 111111111110 011
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHhhccccccc
Q 006884 564 VELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR--MIEQIQQPELRN 614 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~--~L~~~~~~~~~~ 614 (627)
.... ......+.+++.+||..+|++|||+.|+++ .++.+.....+.
T Consensus 232 ~~~~-----~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~~~~ 279 (283)
T 3bhy_A 232 EEYF-----SNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRNVRG 279 (283)
T ss_dssp HHHH-----TTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHCCC--
T ss_pred chhc-----ccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHHhhhc
Confidence 1110 111235677888999999999999999998 567776555443
No 149
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=6.4e-38 Score=315.73 Aligned_cols=239 Identities=23% Similarity=0.384 Sum_probs=194.6
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|... ++..||+|++.... .....+.+|++++..+ +||||+++++++.+.+..++||||++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 92 (279)
T 3fdn_A 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAP 92 (279)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred eeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcC-CCCCCcchhheEecCCEEEEEEecCC
Confidence 478999999999999966 57799999986432 3456788999999999 89999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 93 ~~~l~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~ 164 (279)
T 3fdn_A 93 LGTVYRELQKL-----SKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 164 (279)
T ss_dssp TEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccCCcccc
Confidence 99999999765 24899999999999999999999998 999999999999999999999999998665432
Q ss_pred CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006884 492 TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
....+++.|+|||++.+..++.++||||||+++|||++|+.||.... .......+...... ..
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~~---------~~-- 227 (279)
T 3fdn_A 165 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISRVEFT---------FP-- 227 (279)
T ss_dssp ---CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHTCCC---------CC--
T ss_pred cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc------HHHHHHHHHhCCCC---------CC--
Confidence 34467899999999999999999999999999999999999997532 11111111111100 00
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006884 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMI 604 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L 604 (627)
......+.+++.+||+.+|++|||++|++++-
T Consensus 228 -~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~ 259 (279)
T 3fdn_A 228 -DFVTEGARDLISRLLKHNPSQRPMLREVLEHP 259 (279)
T ss_dssp -TTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCH
T ss_pred -CcCCHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 11123466788899999999999999999853
No 150
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=8.6e-39 Score=327.35 Aligned_cols=253 Identities=21% Similarity=0.317 Sum_probs=192.0
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccC---HHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAAT---KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||+|+.. +++.||+|++...... .+.+.+|++++..+ +||||+++++++...+..++||||+++
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (311)
T 4agu_A 8 IGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQL-KHPNLVNLLEVFRRKRRLHLVFEYCDH 86 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhC-CCCCccchhheeecCCeEEEEEEeCCC
Confidence 478999999999999976 5899999998654332 45678899999999 899999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 87 ~~l~~~~~~~-----~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 158 (311)
T 4agu_A 87 TVLHELDRYQ-----RGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY 158 (311)
T ss_dssp EHHHHHHHTS-----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred chHHHHHhhh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccc
Confidence 9999988754 35899999999999999999999998 999999999999999999999999999876532
Q ss_pred -CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhh------------cc
Q 006884 492 -TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVRE------------EW 557 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~------------~~ 557 (627)
....+|+.|+|||++.+ ..++.++||||||+++|||++|+.||......+. ...+...... ..
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 235 (311)
T 4agu_A 159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ---LYLIRKTLGDLIPRHQQVFSTNQY 235 (311)
T ss_dssp -------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCSCCHHHHHHHHTCGG
T ss_pred cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhcccccccccccccccc
Confidence 23457889999999875 6789999999999999999999999976432111 1111111000 00
Q ss_pred cccccchhhhcCCCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 558 TAEVFDVELLKYQDV----EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 558 ~~~~~d~~l~~~~~~----~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
......+........ +.....+.+++.+||+.||++|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp GTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000000000000000 1123356788999999999999999999874
No 151
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=4.1e-38 Score=339.19 Aligned_cols=238 Identities=22% Similarity=0.384 Sum_probs=197.6
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|++++..+ +||||+++++++...+..++||||++
T Consensus 21 ~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~lv~E~~~ 99 (476)
T 2y94_A 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLF-RHPHIIKLYQVISTPSDIFMVMEYVS 99 (476)
T ss_dssp EEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCS
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEeCCC
Confidence 478999999999999976 78999999986542 2456789999999999 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 100 gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~ 171 (476)
T 2y94_A 100 GGELFDYICKN-----GRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 171 (476)
T ss_dssp SEEHHHHTTSS-----SSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECCTTCC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhcccccc
Confidence 99999999753 35899999999999999999999998 999999999999999999999999999876443
Q ss_pred -CCCCCCccccCccccCCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 492 -TTATRTIGYRAPEVTETRKA-SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
.+..||+.|+|||++.+..+ +.++|||||||++|||++|+.||..... ......+...... ..
T Consensus 172 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~------~~~~~~i~~~~~~---------~p 236 (476)
T 2y94_A 172 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV------PTLFKKICDGIFY---------TP 236 (476)
T ss_dssp BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS------HHHHHHHHTTCCC---------CC
T ss_pred ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH------HHHHHHHhcCCcC---------CC
Confidence 34568999999999988765 6899999999999999999999975421 2222222211110 00
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
... ...+.+++.+||..||++|||++|++++
T Consensus 237 ~~~---s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 237 QYL---NPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp TTC---CHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ccC---CHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 111 2356778889999999999999999983
No 152
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=5.2e-38 Score=321.40 Aligned_cols=255 Identities=20% Similarity=0.331 Sum_probs=194.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|... +++.||+|++.... ...+.+.+|++++..+ +||||+++++++...+..++||||++
T Consensus 37 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 115 (310)
T 2wqm_A 37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFIEDNELNIVLELAD 115 (310)
T ss_dssp EEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred EEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCcEEEEEecCC
Confidence 478999999999999964 78999999987532 2346788999999999 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|.+++..... ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 116 ~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 191 (310)
T 2wqm_A 116 AGDLSRMIKHFKK-QKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 191 (310)
T ss_dssp SCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC-----------
T ss_pred CCCHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCc
Confidence 9999999975321 1346899999999999999999999998 999999999999999999999999999766432
Q ss_pred --CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 492 --TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
....+++.|+|||++.+..++.++||||||+++|||++|+.||..... ............... ... .
T Consensus 192 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~-~~~------~ 260 (310)
T 2wqm_A 192 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLYSLCKKIEQCDYP-PLP------S 260 (310)
T ss_dssp -------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C----CHHHHHHHHHTTCSC-CCC------T
T ss_pred cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch----hHHHHHHHhhcccCC-CCc------c
Confidence 233578899999999999999999999999999999999999975322 222222222211111 000 0
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~ 612 (627)
. .....+.+++.+||+.||++|||+.++++.|++++...-
T Consensus 261 ~---~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~ 300 (310)
T 2wqm_A 261 D---HYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300 (310)
T ss_dssp T---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred c---ccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence 1 112356778889999999999999999999999976543
No 153
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=3.5e-38 Score=323.16 Aligned_cols=250 Identities=23% Similarity=0.410 Sum_probs=191.2
Q ss_pred hcccCcCCceEEEEEEEc----CCcEEEEEEecccccC---HHHHHHHHHHHHHhccCCceeceeeEEeeCCc-----ee
Q 006884 339 AEVLGKGSYGSTYKAILE----DGTTVVVKRLREVAAT---KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDE-----KL 406 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~-----~~ 406 (627)
.+.||+|+||.||+|... .+..||+|++...... .+.+.+|++++.++ +||||+++++++...+. .+
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~ 117 (313)
T 3brb_A 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF-SHPNVIRLLGVCIEMSSQGIPKPM 117 (313)
T ss_dssp EEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEC-------CEE
T ss_pred ccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcC-CCCCeeeeeEEEeeccccCCcccE
Confidence 578999999999999854 2458999998754332 35688999999999 89999999999987553 48
Q ss_pred EEEecCCCCcHHHHhhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccc
Q 006884 407 VVYSYMPAGSLFMLLHRNRS-DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA 485 (627)
Q Consensus 407 lv~e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a 485 (627)
+|+||+++|+|.+++..... .....+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 118 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kl~Dfg~~ 194 (313)
T 3brb_A 118 VILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMTVCVADFGLS 194 (313)
T ss_dssp EEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTTSCEEECSCSCC
T ss_pred EEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEEeecCcc
Confidence 99999999999999864322 22456999999999999999999999998 999999999999999999999999999
Q ss_pred cccCCC------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006884 486 HLINFP------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 486 ~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
+..... ....+++.|+|||++.+..++.++||||||+++|||++ |..||....... . ..........
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~---~~~~~~~~~~ 268 (313)
T 3brb_A 195 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE---M---YDYLLHGHRL 268 (313)
T ss_dssp ----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---H---HHHHHTTCCC
T ss_pred eecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH---H---HHHHHcCCCC
Confidence 866432 22345778999999999999999999999999999999 889997543221 1 1111111110
Q ss_pred ccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006884 559 AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 559 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 609 (627)
. ........+.+++.+||..+|++|||+.+++++|+++..
T Consensus 269 -~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~ 308 (313)
T 3brb_A 269 -K----------QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308 (313)
T ss_dssp -C----------CBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -C----------CCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 0 011222457788899999999999999999999999864
No 154
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=7.9e-39 Score=322.18 Aligned_cols=248 Identities=26% Similarity=0.432 Sum_probs=194.8
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeC-CceeEEEecCCCCcH
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSK-DEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~-~~~~lv~e~~~~gsL 417 (627)
.+.||+|+||.||++... ++.||||+++.. ...+.+.+|++++..+ +||||+++++++.+. +..++||||+++|+|
T Consensus 26 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L 102 (278)
T 1byg_A 26 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKND-ATAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 102 (278)
T ss_dssp EEEEEECSSCEEEEEEET-TEEEEEEECCCC-C--HHHHHTHHHHTTC-CCTTBCCEEEEECCC--CCEEEECCCTTEEH
T ss_pred EeEEecCCCceEEEEEEc-CCEEEEEEecch-hHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCCceEEEEecCCCCCH
Confidence 478999999999999886 889999998754 3557789999999999 899999999997654 468999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC-CCCCC
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-TTATR 496 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-~~~~~ 496 (627)
.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... ....+
T Consensus 103 ~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 176 (278)
T 1byg_A 103 VDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL 176 (278)
T ss_dssp HHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC------------C
T ss_pred HHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeeccccccccccccCCCc
Confidence 99997642 123789999999999999999999998 999999999999999999999999999765433 23456
Q ss_pred CccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHH
Q 006884 497 TIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEE 575 (627)
Q Consensus 497 t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 575 (627)
++.|+|||++.+..++.++||||||+++|||++ |+.||......+ + ... ........ .....
T Consensus 177 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~---~---~~~-~~~~~~~~----------~~~~~ 239 (278)
T 1byg_A 177 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---V---VPR-VEKGYKMD----------APDGC 239 (278)
T ss_dssp CTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG---H---HHH-HTTTCCCC----------CCTTC
T ss_pred cccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH---H---HHH-HhcCCCCC----------CcccC
Confidence 789999999998899999999999999999998 999997543211 1 111 11111100 01112
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006884 576 MVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 576 ~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~ 612 (627)
...+.+++.+||+.+|++|||+.|+++.|++++..+.
T Consensus 240 ~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~~ 276 (278)
T 1byg_A 240 PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHEL 276 (278)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhhc
Confidence 3456778889999999999999999999999987654
No 155
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=8.7e-39 Score=329.81 Aligned_cols=244 Identities=18% Similarity=0.301 Sum_probs=196.5
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
+.||+|+||.||+|..+ +++.||+|++.... .....+.+|+.++..+..||||+++++++...+..++||||+++|
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~ 114 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG 114 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCC
Confidence 78999999999999976 68999999987542 346789999999999978899999999999999999999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC---CCCeEEeecccccccCCC-
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ---DLNGCISDVGLAHLINFP- 491 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~---~~~~ki~DfG~a~~~~~~- 491 (627)
+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++. ++.+||+|||+++.....
T Consensus 115 ~L~~~~~~~~---~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~ 188 (327)
T 3lm5_A 115 EIFSLCLPEL---AEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC 188 (327)
T ss_dssp EGGGGGSSCC----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBCCEEECCGGGCEEC----
T ss_pred cHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCCcEEEeeCccccccCCcc
Confidence 9999986432 346899999999999999999999998 999999999999998 789999999999876543
Q ss_pred --CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 492 --TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
....+|+.|+|||++.+..++.++||||||+++|||++|+.||..... ......+...... . ..
T Consensus 189 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~~~~~--~-~~----- 254 (327)
T 3lm5_A 189 ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN------QETYLNISQVNVD--Y-SE----- 254 (327)
T ss_dssp -----CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCC--C-CT-----
T ss_pred ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc------hHHHHHHHhcccc--c-Cc-----
Confidence 234689999999999999999999999999999999999999975421 1111111111100 0 00
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.........+.+++.+||+.+|++|||++|++++
T Consensus 255 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 255 ETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 0011223356778889999999999999999874
No 156
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=326.54 Aligned_cols=256 Identities=22% Similarity=0.397 Sum_probs=198.3
Q ss_pred hcccCcCCceEEEEEEE-cCCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEee----CCceeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYS----KDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~----~~~~~lv~e~~ 412 (627)
.+.||+|+||.||+++. .+++.||||++.... ...+.+.+|++++..+ +||||+++++++.. ....++|+||+
T Consensus 34 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~lv~e~~ 112 (317)
T 2buj_A 34 IQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLF-NHPNILRLVAYCLRERGAKHEAWLLLPFF 112 (317)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEEEETTEEEEEEEEECC
T ss_pred EEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhc-CCCCeeeEEEEEEeccCCCceeEEEEEeC
Confidence 47899999999999997 478999999886532 3456788999999999 99999999999873 34678999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT 492 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~ 492 (627)
++|+|.+++..... ....+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 113 ~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~ 188 (317)
T 2buj_A 113 KRGTLWNEIERLKD-KGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHV 188 (317)
T ss_dssp TTCBHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCEESCEEE
T ss_pred CCCcHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcchhccccc
Confidence 99999999986432 2356899999999999999999999998 9999999999999999999999999987653211
Q ss_pred -------------CCCCCccccCccccCCCC---CCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhc
Q 006884 493 -------------TATRTIGYRAPEVTETRK---ASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREE 556 (627)
Q Consensus 493 -------------~~~~t~~y~aPE~~~~~~---~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 556 (627)
...+|+.|+|||++.+.. ++.++||||||+++|||++|+.||....... ..... .....
T Consensus 189 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~----~~~~~ 263 (317)
T 2buj_A 189 EGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG-DSVAL----AVQNQ 263 (317)
T ss_dssp ESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT-SCHHH----HHHCC
T ss_pred ccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc-chhhH----Hhhcc
Confidence 123588999999987554 6899999999999999999999996321111 01111 11110
Q ss_pred ccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccccc
Q 006884 557 WTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRN 614 (627)
Q Consensus 557 ~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~~~ 614 (627)
.. ..........+.+++.+||+.+|.+|||+.|+++.|+.++......
T Consensus 264 ~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~~ 311 (317)
T 2buj_A 264 LS----------IPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQ 311 (317)
T ss_dssp ------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC-
T ss_pred CC----------CCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCCC
Confidence 00 0001112245778889999999999999999999999998665443
No 157
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=2.3e-38 Score=321.09 Aligned_cols=245 Identities=22% Similarity=0.323 Sum_probs=197.0
Q ss_pred ccCcCCceEEEEEEEc---CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 341 VLGKGSYGSTYKAILE---DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 341 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.||+|+||.||+|.+. +++.||||+++.... ..+++.+|++++..+ +||||+++++++ ..+..++||||+++
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~-~~~~~~lv~e~~~~ 101 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRMIGIC-EAESWMLVMEMAEL 101 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTC-CCTTBCCEEEEE-ESSSEEEEEECCTT
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEE-CCCCcEEEEEeCCC
Confidence 8999999999999643 467899999875432 256799999999999 899999999998 66778999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC--
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-- 492 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~-- 492 (627)
++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 102 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 173 (291)
T 1xbb_A 102 GPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 173 (291)
T ss_dssp EEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE
T ss_pred CCHHHHHHhC-----cCCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCc
Confidence 9999999864 35899999999999999999999998 9999999999999999999999999998764332
Q ss_pred -----CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhh
Q 006884 493 -----TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVEL 566 (627)
Q Consensus 493 -----~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 566 (627)
...+++.|+|||++.+..++.++||||||+++|||++ |+.||..... .. +...+.......
T Consensus 174 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~------~~-~~~~~~~~~~~~------ 240 (291)
T 1xbb_A 174 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG------SE-VTAMLEKGERMG------ 240 (291)
T ss_dssp EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH------HH-HHHHHHTTCCCC------
T ss_pred ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH------HH-HHHHHHcCCCCC------
Confidence 1235678999999988889999999999999999999 9999975431 11 111111111110
Q ss_pred hcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006884 567 LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 567 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~ 612 (627)
........+.+++.+||+.+|++||++.++++.|+++....-
T Consensus 241 ----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 282 (291)
T 1xbb_A 241 ----CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 282 (291)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHH
T ss_pred ----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence 001123457788889999999999999999999999865543
No 158
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=6e-38 Score=315.51 Aligned_cols=240 Identities=19% Similarity=0.294 Sum_probs=195.9
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccc-ccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV-AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
.+.||+|+||.||+|..+ ++..||+|++... ....+.+.+|++++..+ +||||+++++++.+.+..++||||+++++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 92 (277)
T 3f3z_A 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL-DHPNIIRLYETFEDNTDIYLVMELCTGGE 92 (277)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCCSCB
T ss_pred eeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCeEEEEEeccCCCc
Confidence 478999999999999976 4778999998765 34567899999999999 99999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe---cCCCCeEEeecccccccCCC--
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL---TQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl---~~~~~~ki~DfG~a~~~~~~-- 491 (627)
|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||++ +.++.+||+|||++......
T Consensus 93 L~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~ 164 (277)
T 3f3z_A 93 LFERVVHK-----RVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 164 (277)
T ss_dssp HHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSC
T ss_pred HHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccc
Confidence 99998764 35899999999999999999999998 9999999999999 78899999999999776433
Q ss_pred -CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 492 -TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
....+|+.|+|||++.+. ++.++||||||+++|||++|+.||..... ......+...... ...... .
T Consensus 165 ~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~~~~~--~~~~~~---~ 232 (277)
T 3f3z_A 165 MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTD------SEVMLKIREGTFT--FPEKDW---L 232 (277)
T ss_dssp BCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCC--CCHHHH---T
T ss_pred hhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhCCCC--CCchhh---h
Confidence 344588999999998764 89999999999999999999999975421 1111111111110 000000 0
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.....+.+++.+|++.+|++|||+.|+++
T Consensus 233 ---~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 233 ---NVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp ---TSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ---cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11245678889999999999999999986
No 159
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.4e-38 Score=327.41 Aligned_cols=232 Identities=19% Similarity=0.310 Sum_probs=193.0
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---------CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---------TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv 408 (627)
.+.||+|+||.||+|+.. +++.||||++..... ..+.+.+|++++..+ +||||+++++++.+.+..++|
T Consensus 29 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv 107 (335)
T 3dls_A 29 MSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV-EHANIIKVLDIFENQGFFQLV 107 (335)
T ss_dssp EEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred EeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEEeeCCEEEEE
Confidence 468999999999999965 688999999875431 234577899999999 999999999999999999999
Q ss_pred EecCCCC-cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccc
Q 006884 409 YSYMPAG-SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHL 487 (627)
Q Consensus 409 ~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~ 487 (627)
|||+.+| +|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 108 ~e~~~~g~~l~~~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 179 (335)
T 3dls_A 108 MEKHGSGLDLFAFIDRH-----PRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAY 179 (335)
T ss_dssp EECCTTSCBHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEeCCCCccHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeecccceE
Confidence 9999777 999999754 35899999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCC---CCCCCccccCccccCCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006884 488 INFPT---TATRTIGYRAPEVTETRKA-SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 488 ~~~~~---~~~~t~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
..... ...||+.|+|||++.+..+ +.++||||||+++|||++|+.||....... ....
T Consensus 180 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-----------------~~~~- 241 (335)
T 3dls_A 180 LERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV-----------------EAAI- 241 (335)
T ss_dssp CCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT-----------------TTCC-
T ss_pred CCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHH-----------------hhcc-
Confidence 65432 3458999999999988776 789999999999999999999997421100 0000
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 564 VELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
..... ....+.+++.+||+.+|++|||++|++++
T Consensus 242 ---~~~~~---~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 242 ---HPPYL---VSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ---CCSSC---CCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ---CCCcc---cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00111 12346778889999999999999999985
No 160
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=3.2e-38 Score=324.76 Aligned_cols=255 Identities=23% Similarity=0.359 Sum_probs=204.0
Q ss_pred hcccCcCCceEEEEEEEc------CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILE------DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|+.. +++.||||.+..... ....+.+|++++..+ +||||+++++++.+.+..++|||
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e 108 (322)
T 1p4o_A 30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF-NCHHVVRLLGVVSQGQPTLVIME 108 (322)
T ss_dssp EEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhc-CCCCEeeeEEEEccCCccEEEEE
Confidence 478999999999999864 367899999875432 345688999999999 99999999999999999999999
Q ss_pred cCCCCcHHHHhhhcCC-----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccc
Q 006884 411 YMPAGSLFMLLHRNRS-----DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA 485 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~-----~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a 485 (627)
|+++|+|.+++...+. .....+++..+++++.|++.||.|||+++ |+||||||+||+++.++.+||+|||++
T Consensus 109 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli~~~~~~kl~Dfg~~ 185 (322)
T 1p4o_A 109 LMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMT 185 (322)
T ss_dssp CCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECTTCCEEECCTTCC
T ss_pred eCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEEcCCCeEEECcCccc
Confidence 9999999999975321 11235789999999999999999999998 999999999999999999999999999
Q ss_pred cccCCC------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006884 486 HLINFP------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 486 ~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
+..... ....+|+.|+|||++.+..++.++||||||+++|||++ |+.||.... .......+......
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~------~~~~~~~~~~~~~~ 259 (322)
T 1p4o_A 186 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS------NEQVLRFVMEGGLL 259 (322)
T ss_dssp CGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC------HHHHHHHHHTTCCC
T ss_pred cccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCC------HHHHHHHHHcCCcC
Confidence 765332 12335788999999998899999999999999999999 889997542 11222222211110
Q ss_pred ccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccccc
Q 006884 559 AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRN 614 (627)
Q Consensus 559 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~~~ 614 (627)
.. . ......+.+++.+||+.+|++|||+.|+++.|+++.......
T Consensus 260 -~~-------~---~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~~~ 304 (322)
T 1p4o_A 260 -DK-------P---DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE 304 (322)
T ss_dssp -CC-------C---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHH
T ss_pred -CC-------C---CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCCcc
Confidence 00 0 112235677888999999999999999999999987665543
No 161
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1e-37 Score=314.90 Aligned_cols=242 Identities=21% Similarity=0.330 Sum_probs=196.5
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccC---HHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAAT---KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||+|..+ +++.||+|++...... .+.+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~ 89 (284)
T 3kk8_A 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFHYLVFDLVTG 89 (284)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred hhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHc-CCCCcCeEEEEEEcCCEEEEEEecCCC
Confidence 478999999999999976 5889999998755432 35678899999999 899999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC---eEEeecccccccCCC
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN---GCISDVGLAHLINFP 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~---~ki~DfG~a~~~~~~ 491 (627)
|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++. +||+|||++......
T Consensus 90 ~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (284)
T 3kk8_A 90 GELFEDIVAR-----EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161 (284)
T ss_dssp CBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence 9999998765 35899999999999999999999998 999999999999987655 999999999776543
Q ss_pred C---CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006884 492 T---TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 492 ~---~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
. ...+|+.|+|||++.+..++.++||||||+++|+|++|+.||..... ......+........ . ..
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~------~~~~~~~~~~~~~~~--~---~~ 230 (284)
T 3kk8_A 162 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ------HRLYAQIKAGAYDYP--S---PE 230 (284)
T ss_dssp CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCCCC--T---TT
T ss_pred ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch------hHHHHHHHhccccCC--c---hh
Confidence 2 34688999999999999999999999999999999999999975321 112222211111100 0 01
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 569 YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.. .....+.+++.+||+.+|++|||++|++++
T Consensus 231 ~~---~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 231 WD---TVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp TT---TSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hc---ccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 11 122356678889999999999999999884
No 162
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=7.4e-38 Score=341.03 Aligned_cols=244 Identities=20% Similarity=0.306 Sum_probs=198.4
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
+.||+|+||.||+++.+ +|+.||+|++.... ...+.+..|++++..+ +||||+++++++...+..++||||+++
T Consensus 191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~~l~lVmE~~~g 269 (543)
T 3c4z_A 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNG 269 (543)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhc-CCCCEeeEEEEEeeCCEEEEEEEeccC
Confidence 67999999999999976 68999999996542 3456788999999999 999999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
|+|.+++..... ....+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 270 g~L~~~l~~~~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~ 345 (543)
T 3c4z_A 270 GDIRYHIYNVDE-DNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345 (543)
T ss_dssp CBHHHHHHTSST-TSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCC
T ss_pred CCHHHHHHHhhc-ccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeeccCCCcc
Confidence 999999976432 2346899999999999999999999998 999999999999999999999999999876433
Q ss_pred -CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 492 -TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .........+...... + ..
T Consensus 346 ~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~--~~~~~~~~~i~~~~~~---~------p~ 414 (543)
T 3c4z_A 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK--VENKELKQRVLEQAVT---Y------PD 414 (543)
T ss_dssp BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCC--CCHHHHHHHHHHCCCC---C------CT
T ss_pred cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccc--hhHHHHHHHHhhcccC---C------Cc
Confidence 2346899999999999999999999999999999999999999865322 1222222222221110 0 01
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRPKM-----DDVVR 602 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~-----~ev~~ 602 (627)
. ....+.+++.+||+.+|++||++ +++++
T Consensus 415 ~---~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 415 K---FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp T---SCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred c---cCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 1 12356678889999999999975 66664
No 163
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.3e-38 Score=326.18 Aligned_cols=247 Identities=22% Similarity=0.325 Sum_probs=189.5
Q ss_pred hcccCcCCceEEEEEEE-cCCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCceeceeeEEeeCCce----eEEE
Q 006884 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEK----LVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~----~lv~ 409 (627)
.+.||+|+||.||+++. .+++.||||++..... ....+.+|++++..+ +||||+++++++...... ++||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~~~~~lv~ 95 (311)
T 3ork_A 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NHPAIVAVYDTGEAETPAGPLPYIVM 95 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCC-CCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcC-CCCCcceEEEeeeccCCCCcccEEEE
Confidence 47899999999999996 4789999999976432 234688899998888 999999999998765543 8999
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||+++|+|.+++... ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 96 e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 167 (311)
T 3ork_A 96 EYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIA 167 (311)
T ss_dssp ECCCEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSCC----
T ss_pred ecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccCccccc
Confidence 999999999999864 35899999999999999999999998 9999999999999999999999999998664
Q ss_pred CC-------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006884 490 FP-------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 490 ~~-------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
.. ....||+.|+|||++.+..++.++||||||+++|||++|+.||..... .............
T Consensus 168 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~------~~~~~~~~~~~~~---- 237 (311)
T 3ork_A 168 DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP------VSVAYQHVREDPI---- 237 (311)
T ss_dssp --------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHCCCC----
T ss_pred ccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHhcCCCC----
Confidence 32 123478999999999999999999999999999999999999975421 1222222221111
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHH-HHHHhhc
Q 006884 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVV-RMIEQIQ 608 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~-~~L~~~~ 608 (627)
.+.. .... ...++.+++.+||+.||++||++.+++ ..+.++.
T Consensus 238 ~~~~-~~~~---~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 238 PPSA-RHEG---LSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp CHHH-HSTT---CCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred Cccc-ccCC---CCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 0000 0111 123567788899999999999666554 5565553
No 164
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.3e-38 Score=327.09 Aligned_cols=246 Identities=20% Similarity=0.243 Sum_probs=191.6
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccc------ccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV------AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~------~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||.||+|..+ ++..||+|++... ....+.+.+|++++..+ +||||+++++++.+.+..++||||
T Consensus 31 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~ 109 (345)
T 3hko_A 31 KGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL-HHPNIARLYEVYEDEQYICLVMEL 109 (345)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEEC
T ss_pred cceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhC-CCCCcceeehhhccCCeEEEEEeC
Confidence 578999999999999975 6889999998643 12346789999999999 899999999999999999999999
Q ss_pred CCCCcHHHHhhhcCCC-----------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 006884 412 MPAGSLFMLLHRNRSD-----------------------------------GGTALDWNSRMKIALGTARGIAFIHSEGG 456 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~-----------------------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ 456 (627)
+++|+|.+++...... ....+++..+..++.|++.||.|||+.+
T Consensus 110 ~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~- 188 (345)
T 3hko_A 110 CHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG- 188 (345)
T ss_dssp CCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred CCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC-
Confidence 9999999998532110 0112356778899999999999999998
Q ss_pred CCeeecCCCCCCeEecCCC--CeEEeecccccccCC--------CCCCCCCccccCccccCC--CCCCCcchhHHHHHHH
Q 006884 457 AKFTHGNIKSSNVLLTQDL--NGCISDVGLAHLINF--------PTTATRTIGYRAPEVTET--RKASQKSDVYSFGVLL 524 (627)
Q Consensus 457 ~~ivH~Dlkp~NILl~~~~--~~ki~DfG~a~~~~~--------~~~~~~t~~y~aPE~~~~--~~~~~~~Dv~S~Gvvl 524 (627)
|+||||||+||+++.++ .+||+|||+++.... .....+|+.|+|||++.+ ..++.++||||||+++
T Consensus 189 --ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il 266 (345)
T 3hko_A 189 --ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266 (345)
T ss_dssp --EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHH
T ss_pred --ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHH
Confidence 99999999999998776 899999999986532 123457899999999865 6789999999999999
Q ss_pred HHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 525 LEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 525 ~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
|||++|+.||..... ............... .+. .......+.+++.+||+.+|.+||++.|+++
T Consensus 267 ~el~~g~~pf~~~~~------~~~~~~~~~~~~~~~--~~~------~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 267 HLLLMGAVPFPGVND------ADTISQVLNKKLCFE--NPN------YNVLSPLARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp HHHHHSSCSSCCSSH------HHHHHHHHHCCCCTT--SGG------GGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred HHHHHCCCCCCCCCh------HHHHHHHHhcccccC--Ccc------cccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 999999999975431 122222222211100 000 0112235677888999999999999999988
No 165
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.6e-38 Score=332.82 Aligned_cols=234 Identities=23% Similarity=0.316 Sum_probs=183.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc----CHHHHHHHHHHH-HHhccCCceeceeeEEeeCCceeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVV-GTIGKHSNVVPVRAYYYSKDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~e~~~l-~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 412 (627)
.+.||+|+||.||+++.+ +++.||+|+++.... ..+.+..|..++ ..+ +||||+++++++.+.+..++||||+
T Consensus 43 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~-~hp~Iv~l~~~~~~~~~~~lv~E~~ 121 (373)
T 2r5t_A 43 LKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV-KHPFLVGLHFSFQTADKLYFVLDYI 121 (373)
T ss_dssp EEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCC-CCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhC-CCCCCCCEEEEEEeCCEEEEEEeCC
Confidence 478999999999999976 588999999976532 233455666553 445 8999999999999999999999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC--
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF-- 490 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~-- 490 (627)
++|+|.+++.+.. .+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 122 ~gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~ 193 (373)
T 2r5t_A 122 NGGELFYHLQRER-----CFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN 193 (373)
T ss_dssp CSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC
T ss_pred CCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCccccccccCC
Confidence 9999999998643 5889999999999999999999998 99999999999999999999999999986422
Q ss_pred --CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006884 491 --PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 491 --~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
..+..||+.|+|||++.+..++.++|||||||++|||++|+.||...+ .......+...... +
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~------~~~~~~~i~~~~~~---~------ 258 (373)
T 2r5t_A 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN------TAEMYDNILNKPLQ---L------ 258 (373)
T ss_dssp CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB------HHHHHHHHHHSCCC---C------
T ss_pred CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC------HHHHHHHHHhcccC---C------
Confidence 234568999999999999999999999999999999999999997532 12222222221110 0
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 006884 569 YQDVEEEMVQMLQIALSCVAKVPDSRPKMDD 599 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~e 599 (627)
....+ ..+.+++.+||+.||.+||++.+
T Consensus 259 ~~~~~---~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 259 KPNIT---NSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp CSSSC---HHHHHHHHHHTCSSGGGSTTTTT
T ss_pred CCCCC---HHHHHHHHHHcccCHHhCCCCCC
Confidence 11112 34667888999999999999853
No 166
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-38 Score=330.46 Aligned_cols=244 Identities=21% Similarity=0.333 Sum_probs=195.4
Q ss_pred hcccCcCCceEEEEEEE----cCCcEEEEEEecccc-----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEE
Q 006884 339 AEVLGKGSYGSTYKAIL----EDGTTVVVKRLREVA-----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 409 (627)
.+.||+|+||.||+++. .+++.||||+++... ...+.+.+|++++..+.+||||+++++++...+..++||
T Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 138 (355)
T 1vzo_A 59 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLIL 138 (355)
T ss_dssp EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEE
T ss_pred EEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEe
Confidence 47899999999999997 368999999986532 234567789999999977999999999999999999999
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||+++|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 139 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 139 DYINGGELFTHLSQR-----ERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp CCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred ecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 999999999999864 25899999999999999999999998 9999999999999999999999999997653
Q ss_pred CC-----CCCCCCccccCccccCC--CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006884 490 FP-----TTATRTIGYRAPEVTET--RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 490 ~~-----~~~~~t~~y~aPE~~~~--~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
.. ....||+.|+|||++.+ ..++.++||||||+++|||++|+.||....... ..............
T Consensus 211 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~--~~~~~~~~~~~~~~----- 283 (355)
T 1vzo_A 211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN--SQAEISRRILKSEP----- 283 (355)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC--CHHHHHHHHHHCCC-----
T ss_pred cCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc--hHHHHHHHHhccCC-----
Confidence 21 23458999999999975 357899999999999999999999997543322 22222222221110
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHHH
Q 006884 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRP-----KMDDVVRMI 604 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~ev~~~L 604 (627)
....+....+.+++.+||..||++|| +++|++++.
T Consensus 284 -------~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 284 -------PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred -------CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 00011223566788899999999999 999998754
No 167
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3.6e-38 Score=340.00 Aligned_cols=251 Identities=22% Similarity=0.288 Sum_probs=186.6
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeC------CceeEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSK------DEKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~------~~~~lv 408 (627)
.+.||+|+||.||+|+.. +++.||||++..... ..+.+.+|++++..+ +||||+++++++... ...++|
T Consensus 67 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~~~~~~~lv 145 (464)
T 3ttj_A 67 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLV 145 (464)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCCSTTTCCEEEEE
T ss_pred EEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhC-CCCCCCcEEEEEccCCccccCCeEEEE
Confidence 478999999999999965 688999999975422 346788999999999 999999999999654 356999
Q ss_pred EecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 409 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
|||+++ +|.+.+.. .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 146 ~E~~~~-~l~~~~~~-------~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 214 (464)
T 3ttj_A 146 MELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 214 (464)
T ss_dssp EECCSE-EHHHHHTS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCCC---
T ss_pred EeCCCC-CHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEeeeec
Confidence 999976 46666642 3889999999999999999999998 999999999999999999999999999876
Q ss_pred CCC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHH---------------
Q 006884 489 NFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVR--------------- 550 (627)
Q Consensus 489 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~--------------- 550 (627)
... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+ .+...+.
T Consensus 215 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~--~~~~i~~~lg~p~~~~~~~~~~ 292 (464)
T 3ttj_A 215 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID--QWNKVIEQLGTPCPEFMKKLQP 292 (464)
T ss_dssp --CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHHHCSCCHHHHTTSCH
T ss_pred CCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHhcCCCCHHHHHHcch
Confidence 543 34568999999999999999999999999999999999999997643211 0000000
Q ss_pred ---HHhhhccc-c-----cccchhhhcCCC--hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 551 ---SVVREEWT-A-----EVFDVELLKYQD--VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 551 ---~~~~~~~~-~-----~~~d~~l~~~~~--~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
........ . ..+...+..... ......++.+++.+||..||++|||++|++++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 293 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000 0 000000000000 01124567889999999999999999999874
No 168
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=9.3e-38 Score=313.84 Aligned_cols=237 Identities=21% Similarity=0.350 Sum_probs=175.0
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.. +++.||+|++.... ...+.+.+|++++..+ +||||+++++++.+.+..++||||+
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~- 95 (275)
T 2eue_A 18 VKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHPHIIKLYDVIKSKDEIIMVIEYA- 95 (275)
T ss_dssp CC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSCEEEEEECC-
T ss_pred EEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhC-CCCCeEEEEEEEecCCeEEEEehhc-
Confidence 367999999999999954 68999999986542 2356789999999999 8999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 96 ~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 167 (275)
T 2eue_A 96 GNELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp CEEHHHHHHTS-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCChHhEEECCCCCEEEeecccceeccCccc
Confidence 77888888653 35899999999999999999999998 999999999999999999999999999766433
Q ss_pred -CCCCCCccccCccccCCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 492 -TTATRTIGYRAPEVTETRKA-SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
....+|+.|+|||++.+..+ +.++||||||+++|||++|+.||.... .............. + .
T Consensus 168 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~~~~~---~------~ 232 (275)
T 2eue_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES------IPVLFKNISNGVYT---L------P 232 (275)
T ss_dssp -------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCC---C------C
T ss_pred ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCC---C------C
Confidence 23457899999999987765 789999999999999999999997532 12222222111110 0 0
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
......+.+++.+||+.||++|||++|++++
T Consensus 233 ---~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 233 ---KFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ---TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ---ccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 1112346678889999999999999999763
No 169
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.3e-38 Score=342.61 Aligned_cols=237 Identities=21% Similarity=0.307 Sum_probs=188.6
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+++.. +++.||||++.... .....+.+|++++..+ +||||+++++++...+..++||||++
T Consensus 153 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~ 231 (446)
T 4ejn_A 153 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-RHPFLTALKYSFQTHDRLCFVMEYAN 231 (446)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCC-SCTTSCCEEEEEEETTEEEEEECCCS
T ss_pred eEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhC-CCCeEeeEEEEEeeCCEEEEEEeeCC
Confidence 478999999999999965 68999999997542 2335677888888888 89999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS-EGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF-- 490 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~-- 490 (627)
+|+|.+++... ..+++..+..++.|++.||.|||+ .+ |+||||||+|||++.++.+||+|||+++....
T Consensus 232 ~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 303 (446)
T 4ejn_A 232 GGELFFHLSRE-----RVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 303 (446)
T ss_dssp SCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence 99999999765 358999999999999999999998 77 99999999999999999999999999986432
Q ss_pred --CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006884 491 --PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 491 --~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+...... +.
T Consensus 304 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~------~~~~~~~i~~~~~~---~p----- 369 (446)
T 4ejn_A 304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HEKLFELILMEEIR---FP----- 369 (446)
T ss_dssp ---CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCC---CC-----
T ss_pred cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC------HHHHHHHHHhCCCC---CC-----
Confidence 234568999999999999999999999999999999999999997542 12222222221110 00
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 006884 569 YQDVEEEMVQMLQIALSCVAKVPDSRP-----KMDDVVR 602 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~ev~~ 602 (627)
.. ...++.+++.+||+.||.+|| +++|+++
T Consensus 370 -~~---~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 370 -RT---LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp -TT---SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred -cc---CCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 11 123567788899999999999 9999987
No 170
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=3.6e-38 Score=318.54 Aligned_cols=241 Identities=20% Similarity=0.313 Sum_probs=194.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||+|... +++.||+|++.... ....++.+|+..+..+.+||||+++++++.+.+..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 95 (289)
T 1x8b_A 16 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNG 95 (289)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred hhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCC
Confidence 478999999999999976 78999999987542 23567888999998888999999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC-------------------C
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD-------------------L 475 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~-------------------~ 475 (627)
|+|.+++..... ....+++..+..++.|++.||.|||+++ |+||||||+||+++.+ .
T Consensus 96 ~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~ 171 (289)
T 1x8b_A 96 GSLADAISENYR-IMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV 171 (289)
T ss_dssp CBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC--------------------CC
T ss_pred CcHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCcccccccccccccCCce
Confidence 999999976421 1245899999999999999999999998 9999999999999844 4
Q ss_pred CeEEeecccccccCCCCCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhh
Q 006884 476 NGCISDVGLAHLINFPTTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVR 554 (627)
Q Consensus 476 ~~ki~DfG~a~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 554 (627)
.+||+|||.+..........+|+.|+|||++.+. .++.++||||||+++|||++|..|+.... . ... ..
T Consensus 172 ~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~--------~-~~~-~~ 241 (289)
T 1x8b_A 172 MFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD--------Q-WHE-IR 241 (289)
T ss_dssp CEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH--------H-HHH-HH
T ss_pred EEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh--------H-HHH-HH
Confidence 7899999999988777777799999999999765 56689999999999999999988764321 0 111 11
Q ss_pred hcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 555 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
....... ... ....+.+++.+||+.||++|||+.|++++
T Consensus 242 ~~~~~~~-------~~~---~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 242 QGRLPRI-------PQV---LSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp TTCCCCC-------SSC---CCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred cCCCCCC-------Ccc---cCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 1111110 011 12356778889999999999999999763
No 171
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.9e-38 Score=339.24 Aligned_cols=193 Identities=23% Similarity=0.326 Sum_probs=170.2
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhc-----cCCceeceeeEEeeCCceeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIG-----KHSNVVPVRAYYYSKDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~-----~h~niv~~~~~~~~~~~~~lv~e~~ 412 (627)
.+.||+|+||.||+|... +++.||||+++......+.+.+|++++..+. .|+||+.+++++...+..++||||+
T Consensus 102 ~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~ 181 (429)
T 3kvw_A 102 LKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELL 181 (429)
T ss_dssp EEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCC
T ss_pred EEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEecc
Confidence 478999999999999866 5889999999765555677888998888874 5779999999999999999999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC--eEEeecccccccCC
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN--GCISDVGLAHLINF 490 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~--~ki~DfG~a~~~~~ 490 (627)
. ++|.+++..... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++. +||+|||+++....
T Consensus 182 ~-~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~ 254 (429)
T 3kvw_A 182 S-MNLYELIKKNKF---QGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ 254 (429)
T ss_dssp C-CBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred C-CCHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeecccceecCC
Confidence 6 699999986532 35899999999999999999999998 999999999999999987 99999999977654
Q ss_pred C-CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 006884 491 P-TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSG 538 (627)
Q Consensus 491 ~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~ 538 (627)
. .+..+|+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 255 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 255 RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 3 35568999999999999999999999999999999999999997643
No 172
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2e-37 Score=324.43 Aligned_cols=242 Identities=19% Similarity=0.375 Sum_probs=195.0
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEeccccc---------CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEE
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---------TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVY 409 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 409 (627)
+.||+|+||.||+|+.+ +|+.||||++..... ..+.+.+|+.++..+.+||||+++++++......++||
T Consensus 100 ~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 179 (365)
T 2y7j_A 100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVF 179 (365)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEE
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEE
Confidence 78999999999999986 699999999865431 13567889999999978999999999999999999999
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||+++|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 180 e~~~g~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~ 251 (365)
T 2y7j_A 180 DLMRKGELFDYLTEK-----VALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLE 251 (365)
T ss_dssp CCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEEecCcccccC
Confidence 999999999999754 35899999999999999999999998 9999999999999999999999999998764
Q ss_pred CC---CCCCCCccccCccccCC------CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccc
Q 006884 490 FP---TTATRTIGYRAPEVTET------RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAE 560 (627)
Q Consensus 490 ~~---~~~~~t~~y~aPE~~~~------~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (627)
.. ....||+.|+|||++.+ ..++.++||||||+++|||++|+.||..... ......+......
T Consensus 252 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~------~~~~~~i~~~~~~-- 323 (365)
T 2y7j_A 252 PGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ------ILMLRMIMEGQYQ-- 323 (365)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCC--
T ss_pred CCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhCCCC--
Confidence 33 33468999999999853 3578999999999999999999999975321 1111111111110
Q ss_pred ccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 561 VFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 561 ~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
...+.. . .....+.+++.+||+.||++|||++|++++
T Consensus 324 ~~~~~~---~---~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 324 FSSPEW---D---DRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp CCHHHH---S---SSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCccc---c---cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 000000 0 112356788899999999999999999863
No 173
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.5e-39 Score=342.32 Aligned_cols=243 Identities=14% Similarity=0.185 Sum_probs=185.6
Q ss_pred hcccCcCCceEEEEEEE-cCCcEEEEEEeccc----ccCHHHHHHHHHHHHHhc--cCCceecee-------eEEeeCC-
Q 006884 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREV----AATKREFEQQMEVVGTIG--KHSNVVPVR-------AYYYSKD- 403 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~--~h~niv~~~-------~~~~~~~- 403 (627)
.+.||+|+||.||+|+. .+|+.||||++... ....+.+.+|++++..+. +||||++++ +++...+
T Consensus 78 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 157 (377)
T 3byv_A 78 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 157 (377)
T ss_dssp EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTS
T ss_pred cceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCC
Confidence 47899999999999996 46899999998743 223567889995555443 899999998 6655443
Q ss_pred ----------------ceeEEEecCCCCcHHHHhhhcCCC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCC
Q 006884 404 ----------------EKLVVYSYMPAGSLFMLLHRNRSD--GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIK 465 (627)
Q Consensus 404 ----------------~~~lv~e~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk 465 (627)
..++||||+ +|+|.+++...... ....+++..+..++.|++.||+|||+++ |+|||||
T Consensus 158 ~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDik 233 (377)
T 3byv_A 158 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYLR 233 (377)
T ss_dssp CSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---EECSCCC
T ss_pred ccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCC
Confidence 278999999 68999999864211 1123456888899999999999999998 9999999
Q ss_pred CCCeEecCCCCeEEeecccccccCCC-CCCCCCccccCccccCCC-----------CCCCcchhHHHHHHHHHHHhCCCC
Q 006884 466 SSNVLLTQDLNGCISDVGLAHLINFP-TTATRTIGYRAPEVTETR-----------KASQKSDVYSFGVLLLEMLTGKAP 533 (627)
Q Consensus 466 p~NILl~~~~~~ki~DfG~a~~~~~~-~~~~~t~~y~aPE~~~~~-----------~~~~~~Dv~S~Gvvl~el~tg~~p 533 (627)
|+|||++.++.+||+|||+++..... ....| +.|+|||++.+. .++.++|||||||++|||++|+.|
T Consensus 234 p~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~P 312 (377)
T 3byv_A 234 PVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLP 312 (377)
T ss_dssp GGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCC
T ss_pred HHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCC
Confidence 99999999999999999999875443 23446 899999999887 899999999999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHhhc
Q 006884 534 LQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR--MIEQIQ 608 (627)
Q Consensus 534 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~--~L~~~~ 608 (627)
|.......... .+. ......+ ..+.+++.+||+.||++|||+.|+++ .++.+.
T Consensus 313 f~~~~~~~~~~---------------~~~----~~~~~~~---~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~ 367 (377)
T 3byv_A 313 ITKDAALGGSE---------------WIF----RSCKNIP---QPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLR 367 (377)
T ss_dssp C------CCSG---------------GGG----SSCCCCC---HHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHHH
T ss_pred Ccccccccchh---------------hhh----hhccCCC---HHHHHHHHHHcCCCchhCCCHHHHhhChHHHHHH
Confidence 97644322111 000 0011122 35667888999999999999999987 444443
No 174
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.8e-37 Score=312.90 Aligned_cols=242 Identities=24% Similarity=0.383 Sum_probs=192.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEee----CCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYS----KDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~----~~~~~lv~e 410 (627)
.+.||+|+||.||+|... ++..||+|++..... ..+.+.+|++++..+ +||||+++++++.. ....++|||
T Consensus 31 ~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~lv~e 109 (290)
T 1t4h_A 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKCIVLVTE 109 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEESSSCEEEEEEEE
T ss_pred eeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhC-CCCCeeeeeeeeccccCCCceEEEEEE
Confidence 367999999999999975 578899999875433 345688999999999 99999999999875 345789999
Q ss_pred cCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEec-CCCCeEEeecccccccC
Q 006884 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLT-QDLNGCISDVGLAHLIN 489 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~-~~~~~ki~DfG~a~~~~ 489 (627)
|+++|+|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||||||+||+++ .++.+||+|||++....
T Consensus 110 ~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 110 LMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp CCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred ecCCCCHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence 99999999999864 35899999999999999999999986 4699999999999998 78999999999997654
Q ss_pred CCC--CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006884 490 FPT--TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 490 ~~~--~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
... ...+|+.|+|||++.+ .++.++||||||+++|+|++|+.||.... ............ .....++.
T Consensus 184 ~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~-----~~~~~~~~~~~~-~~~~~~~~--- 253 (290)
T 1t4h_A 184 ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ-----NAAQIYRRVTSG-VKPASFDK--- 253 (290)
T ss_dssp TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS-----SHHHHHHHHTTT-CCCGGGGG---
T ss_pred ccccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcC-----cHHHHHHHHhcc-CCccccCC---
Confidence 432 3457899999998864 58999999999999999999999997532 122222222111 11111110
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.....+.+++.+||+.+|++|||++|++++
T Consensus 254 ------~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 254 ------VAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp ------CCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ------CCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 111357788899999999999999999863
No 175
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.7e-38 Score=328.57 Aligned_cols=254 Identities=13% Similarity=0.162 Sum_probs=197.0
Q ss_pred hcccCcCCceEEEEEEEcC---------CcEEEEEEecccccCHHHHHHHHHHHHHhccCCceec---------------
Q 006884 339 AEVLGKGSYGSTYKAILED---------GTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVP--------------- 394 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~--------------- 394 (627)
.+.||+|+||.||+|+... ++.||+|++... +.+.+|++++.++ +||||++
T Consensus 47 ~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~i~~ 121 (352)
T 2jii_A 47 KSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRA-AKPLQVNKWKKLYSTPLLAIPT 121 (352)
T ss_dssp EEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHH-CCHHHHHHHHHHTTCTTCSCCC
T ss_pred EEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHh-cccchhhhhhhhccCCccCccc
Confidence 4789999999999999763 789999998643 4688999999999 8999887
Q ss_pred eeeEEee-CCceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC
Q 006884 395 VRAYYYS-KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ 473 (627)
Q Consensus 395 ~~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~ 473 (627)
+++++.. +...++||||+ +++|.+++.... ...+++..++.++.|++.||.|||+++ |+||||||+|||++.
T Consensus 122 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIl~~~ 194 (352)
T 2jii_A 122 CMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP---KHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENIFVDP 194 (352)
T ss_dssp CCEEEEETTTEEEEEEECC-CEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGGEEEET
T ss_pred hhhccccCCcEEEEEecCC-CcCHHHHHHhCC---cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEEcC
Confidence 5677766 67789999999 999999998642 246999999999999999999999998 999999999999999
Q ss_pred CC--CeEEeecccccccCCC-----------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCC
Q 006884 474 DL--NGCISDVGLAHLINFP-----------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHD 540 (627)
Q Consensus 474 ~~--~~ki~DfG~a~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~ 540 (627)
++ .+||+|||+++..... ....+|+.|+|||++.+..++.++||||||+++|||++|+.||......
T Consensus 195 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 274 (352)
T 2jii_A 195 EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN 274 (352)
T ss_dssp TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcC
Confidence 98 9999999999765321 2235789999999999999999999999999999999999999864321
Q ss_pred CCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 541 DVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
. ..+....... ... .....+.. ..... ....+.+++.+||+.+|++|||++++++.|+++....
T Consensus 275 ~-~~~~~~~~~~-~~~-~~~~~~~~-~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 338 (352)
T 2jii_A 275 T-EDIMKQKQKF-VDK-PGPFVGPC-GHWIR---PSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDL 338 (352)
T ss_dssp H-HHHHHHHHHH-HHS-CCCEECTT-SCEEC---CCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred H-HHHHHHHHhc-cCC-hhhhhhhc-cccCC---CcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhc
Confidence 1 1111111111 111 11111100 00001 1245677888999999999999999999999987553
No 176
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.1e-37 Score=321.71 Aligned_cols=252 Identities=23% Similarity=0.352 Sum_probs=198.4
Q ss_pred hcccCcCCceEEEEEEE------cCCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAIL------EDGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|++ .++..||||++.... ....++.+|+.++..+ +||||+++++++...+..++|||
T Consensus 35 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e 113 (327)
T 2yfx_A 35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIGVSLQSLPRFILME 113 (327)
T ss_dssp EEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred EEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhC-CCCCCCeEEEEEcCCCCcEEEEe
Confidence 47899999999999984 246789999986432 2356788999999999 99999999999999999999999
Q ss_pred cCCCCcHHHHhhhcCCC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC---CCCeEEeecccc
Q 006884 411 YMPAGSLFMLLHRNRSD--GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ---DLNGCISDVGLA 485 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~---~~~~ki~DfG~a 485 (627)
|+++|+|.+++...... ....+++..++.++.|++.||.|||+.+ |+||||||+||+++. +..+||+|||++
T Consensus 114 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~ 190 (327)
T 2yfx_A 114 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190 (327)
T ss_dssp CCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECCCHHH
T ss_pred cCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEECccccc
Confidence 99999999999875421 1245899999999999999999999998 999999999999984 456999999998
Q ss_pred cccCCC------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006884 486 HLINFP------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 486 ~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
+..... ....+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ......+......
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~------~~~~~~~~~~~~~ 264 (327)
T 2yfx_A 191 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN------QEVLEFVTSGGRM 264 (327)
T ss_dssp HHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH------HHHHHHHHTTCCC
T ss_pred cccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH------HHHHHHHhcCCCC
Confidence 754322 23346789999999988899999999999999999998 9999975321 1122222111110
Q ss_pred ccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006884 559 AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 559 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~ 611 (627)
. .. ......+.+++.+||+.+|.+||++.|+++.|+.+....
T Consensus 265 -~-------~~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 265 -D-------PP---KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp -C-------CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred -C-------CC---CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 0 00 112235678889999999999999999999999986543
No 177
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.6e-38 Score=325.05 Aligned_cols=254 Identities=23% Similarity=0.406 Sum_probs=198.8
Q ss_pred hcccCcCCceEEEEEEE-----cCCcEEEEEEeccccc-CHHHHHHHHHHHHHhccCCceeceeeEEeeCC--ceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAIL-----EDGTTVVVKRLREVAA-TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD--EKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~--~~~lv~e 410 (627)
.+.||+|+||.||++++ .+++.||||++..... ..+.+.+|++++..+ +||||+++++++...+ ..++|||
T Consensus 46 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e 124 (326)
T 2w1i_A 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGRRNLKLIME 124 (326)
T ss_dssp EEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTC-CCTTBCCEEEEECC----CCEEEEC
T ss_pred eeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEEecCCCceEEEEE
Confidence 47899999999999984 3588999999876432 346799999999999 8999999999987654 6789999
Q ss_pred cCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC
Q 006884 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF 490 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 490 (627)
|+++|+|.+++.... ..+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 125 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~ 197 (326)
T 2w1i_A 125 YLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ 197 (326)
T ss_dssp CCTTCBHHHHHHHST----TSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECCS
T ss_pred CCCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchhhccc
Confidence 999999999998652 35899999999999999999999998 99999999999999999999999999987643
Q ss_pred CC-------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC--------CCCC-CCHHHHHHHHhh
Q 006884 491 PT-------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSG--------HDDV-VDLPRWVRSVVR 554 (627)
Q Consensus 491 ~~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~--------~~~~-~~~~~~~~~~~~ 554 (627)
.. ...++..|+|||++.+..++.++||||||+++|||++|..||.... .... ......+...+.
T Consensus 198 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (326)
T 2w1i_A 198 DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 277 (326)
T ss_dssp SCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred cccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhh
Confidence 32 2335677999999988889999999999999999999999876321 0000 000000111111
Q ss_pred hcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 555 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
.... ..........+.+++.+||+.+|++|||+.|+++.|++++..
T Consensus 278 ~~~~----------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 278 NNGR----------LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp TTCC----------CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCC----------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 1100 001112234677888999999999999999999999998653
No 178
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=9.1e-38 Score=313.85 Aligned_cols=241 Identities=22% Similarity=0.344 Sum_probs=195.0
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|++++..+ +||||+++++++.+.+..++|+||++++
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 90 (276)
T 2yex_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGG 90 (276)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred EEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhc-CCCCceeeeeEEEcCCEEEEEEEecCCC
Confidence 478999999999999976 68999999986543 2356789999999999 9999999999999999999999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC-----
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF----- 490 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~----- 490 (627)
+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||.+.....
T Consensus 91 ~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 162 (276)
T 2yex_A 91 ELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (276)
T ss_dssp EGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred cHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccCCCcchh
Confidence 999998643 35899999999999999999999998 99999999999999999999999999976532
Q ss_pred -CCCCCCCccccCccccCCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006884 491 -PTTATRTIGYRAPEVTETRKA-SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 491 -~~~~~~t~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
.....+++.|+|||++.+..+ +.++||||||+++|||++|+.||........ ... ........ .
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~----~~~~~~~~---~------ 228 (276)
T 2yex_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYS----DWKEKKTY---L------ 228 (276)
T ss_dssp CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH-HHH----HHHTTCTT---S------
T ss_pred cccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH-HHH----Hhhhcccc---c------
Confidence 233457899999999987665 7899999999999999999999976433211 111 11111000 0
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 569 YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.........+.+++.+||+.+|++|||++|++++
T Consensus 229 -~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 229 -NPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp -TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 0011122356678889999999999999999763
No 179
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.8e-37 Score=315.13 Aligned_cols=242 Identities=21% Similarity=0.360 Sum_probs=195.1
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc-CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA-TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
.+.||+|+||.||+++.. +++.||+|++..... ..+.+.+|++++..+ +||||+++++++.+.+..++||||+++|+
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 92 (304)
T 2jam_A 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKI-KHENIVTLEDIYESTTHYYLVMQLVSGGE 92 (304)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred eeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhC-CCCCeeehhhhcccCCEEEEEEEcCCCcc
Confidence 478999999999999976 689999999975432 346788999999999 99999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe---cCCCCeEEeecccccccCCCC-
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL---TQDLNGCISDVGLAHLINFPT- 492 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl---~~~~~~ki~DfG~a~~~~~~~- 492 (627)
|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+||++ +.++.+||+|||+++......
T Consensus 93 L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 164 (304)
T 2jam_A 93 LFDRILERG-----VYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM 164 (304)
T ss_dssp HHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTT
T ss_pred HHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCcc
Confidence 999997642 5899999999999999999999998 9999999999999 788999999999997654322
Q ss_pred -CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006884 493 -TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 493 -~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
...+++.|+|||++.+..++.++||||||+++|||++|+.||..... ......+...... +... .
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~i~~~~~~---~~~~-----~ 230 (304)
T 2jam_A 165 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE------SKLFEKIKEGYYE---FESP-----F 230 (304)
T ss_dssp HHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHCCCC---CCTT-----T
T ss_pred ccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHHcCCCC---CCcc-----c
Confidence 23478999999999999999999999999999999999999975321 1122222111110 0000 0
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.......+.+++.+||+.||++|||++|++++
T Consensus 231 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 231 WDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11122456778889999999999999999873
No 180
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.3e-37 Score=331.80 Aligned_cols=242 Identities=21% Similarity=0.334 Sum_probs=185.0
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---------CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---------TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv 408 (627)
.+.||+|+||.||+|..+ +++.||||++..... ....+.+|++++.++ +||||+++++++. .+..++|
T Consensus 140 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~-~~~~~lv 217 (419)
T 3i6u_A 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFFD-AEDYYIV 217 (419)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHC-CCTTBCCCCEEEE-SSEEEEE
T ss_pred EeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhC-CCCCEeeEEEEEe-cCceEEE
Confidence 467999999999999965 578999999865321 123478999999999 9999999999975 5568899
Q ss_pred EecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC---CCeEEeecccc
Q 006884 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD---LNGCISDVGLA 485 (627)
Q Consensus 409 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~---~~~ki~DfG~a 485 (627)
|||+++|+|.+++... ..+++..+..++.|++.||.|||+++ |+||||||+|||++.+ ..+||+|||++
T Consensus 218 ~e~~~~g~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kl~DFG~a 289 (419)
T 3i6u_A 218 LELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHS 289 (419)
T ss_dssp EECCTTCBGGGGTSSS-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEEECCSSTT
T ss_pred EEcCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEEEeecccc
Confidence 9999999999988653 35899999999999999999999998 9999999999999754 45999999999
Q ss_pred cccCCC---CCCCCCccccCccccCC---CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccc
Q 006884 486 HLINFP---TTATRTIGYRAPEVTET---RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTA 559 (627)
Q Consensus 486 ~~~~~~---~~~~~t~~y~aPE~~~~---~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 559 (627)
+..... ....||+.|+|||++.+ ..++.++||||||+++|||++|+.||...... ..+...+ ......
T Consensus 290 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~--~~~~~~i----~~~~~~ 363 (419)
T 3i6u_A 290 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ--VSLKDQI----TSGKYN 363 (419)
T ss_dssp TSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS--CCHHHHH----HTTCCC
T ss_pred eecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch--HHHHHHH----hcCCCC
Confidence 876543 24458999999999853 56788999999999999999999999754322 1222111 111110
Q ss_pred cccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 560 EVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 560 ~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
+.+... ......+.+++.+||+.+|++|||++|++++
T Consensus 364 --~~~~~~-----~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 364 --FIPEVW-----AEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp --CCHHHH-----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred --CCchhh-----cccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 000000 1122456788899999999999999999874
No 181
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.2e-39 Score=331.05 Aligned_cols=252 Identities=19% Similarity=0.313 Sum_probs=188.0
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCH--HHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATK--REFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|+.. +++.||+|++....... ..+.+|++++..+ +||||+++++++...+..++||||++ |
T Consensus 7 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 84 (324)
T 3mtl_A 7 LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL-KHANIVTLHDIIHTEKSLTLVFEYLD-K 84 (324)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCC-CCTTBCCEEEEEECSSCEEEEEECCS-E
T ss_pred EEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhc-CCCCCCeeeeEEeeCCEEEEEecccc-c
Confidence 468999999999999976 68999999986543221 2455789999999 89999999999999999999999997 5
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~---- 491 (627)
+|.+++... +..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~l~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 157 (324)
T 3mtl_A 85 DLKQYLDDC----GNIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY 157 (324)
T ss_dssp EHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred CHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccCCcccc
Confidence 999998764 246899999999999999999999998 999999999999999999999999999865432
Q ss_pred CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcc---cccccc-hhh
Q 006884 492 TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEW---TAEVFD-VEL 566 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d-~~l 566 (627)
....+|+.|+|||++.+ ..++.++||||||+++|||++|+.||......+ ....+........ ...... ...
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~ 234 (324)
T 3mtl_A 158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE---QLHFIFRILGTPTEETWPGILSNEEF 234 (324)
T ss_dssp -----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCTTTSTTGGGCHHH
T ss_pred ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCChHhchhhhcchhh
Confidence 23357899999999876 568999999999999999999999997643211 1111111111000 000000 000
Q ss_pred h-----c--CCC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 567 L-----K--YQD----VEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 567 ~-----~--~~~----~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
. . ... .+.....+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 235 KTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0 0 000 0011235678889999999999999999988
No 182
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=7.4e-38 Score=327.36 Aligned_cols=190 Identities=22% Similarity=0.359 Sum_probs=168.2
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||++... +++.||+|++.... ...+.+.+|++++..+ +||||+++++++...+..++||||+++|
T Consensus 38 ~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 116 (360)
T 3eqc_A 38 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISICMEHMDGG 116 (360)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEETTEEEEEECCCTTC
T ss_pred eeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHC-CCCCEEEEeEEEEECCEEEEEEECCCCC
Confidence 468999999999999976 68999999987542 2346788999999999 9999999999999999999999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCCeEecCCCCeEEeecccccccC--CCC
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE-GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN--FPT 492 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~--~~~ 492 (627)
+|.+++.... .+++..+..++.|++.||.|||+. + |+||||||+||+++.++.+||+|||++.... ...
T Consensus 117 ~L~~~l~~~~-----~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 188 (360)
T 3eqc_A 117 SLDQVLKKAG-----RIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 188 (360)
T ss_dssp BHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC--
T ss_pred CHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCccccccccc
Confidence 9999998653 589999999999999999999996 7 9999999999999999999999999987542 223
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 006884 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHS 537 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~ 537 (627)
...+|+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 189 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 233 (360)
T 3eqc_A 189 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233 (360)
T ss_dssp --CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred CCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 456899999999999999999999999999999999999999754
No 183
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.2e-38 Score=322.83 Aligned_cols=251 Identities=24% Similarity=0.379 Sum_probs=190.4
Q ss_pred hcccCcCCceEEEEEEEc--CCc--EEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILE--DGT--TVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|++. +++ .||||+++... ...+.+.+|++++..+ +||||+++++++.... .++|+|
T Consensus 23 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~-~~~v~e 100 (291)
T 1u46_A 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRLYGVVLTPP-MKMVTE 100 (291)
T ss_dssp EEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSS-CEEEEE
T ss_pred eeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhC-CCCCcccEEEEEccCC-ceeeEe
Confidence 478999999999999853 233 68999986542 2346788999999999 8999999999987654 889999
Q ss_pred cCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC
Q 006884 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF 490 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 490 (627)
|+++|+|.+++.... ..+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 101 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 101 LAPLGSLLDRLRKHQ----GHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp CCTTCBHHHHHHHHG----GGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred cccCCCHHHHHHhcc----CCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEccccccccccc
Confidence 999999999998642 35899999999999999999999998 99999999999999999999999999987643
Q ss_pred CC-------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006884 491 PT-------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 491 ~~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
.. ...++..|+|||++.+..++.++||||||+++|||++ |+.||.... .......+.......
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~------~~~~~~~~~~~~~~~--- 244 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN------GSQILHKIDKEGERL--- 244 (291)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHHHTSCCCC---
T ss_pred cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCC------HHHHHHHHHccCCCC---
Confidence 22 2345778999999988889999999999999999999 999997542 122222222211110
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccccc
Q 006884 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRN 614 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~~~ 614 (627)
.........+.+++.+||+.+|++|||+.++++.|+++.....+.
T Consensus 245 -------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 289 (291)
T 1u46_A 245 -------PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMRA 289 (291)
T ss_dssp -------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC------
T ss_pred -------CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccchhh
Confidence 001122345778888999999999999999999999998766544
No 184
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=3.1e-37 Score=335.70 Aligned_cols=241 Identities=20% Similarity=0.308 Sum_probs=196.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccc---ccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV---AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||+++.+ +++.||||++... ......+.+|++++.++ +||||+++++++......++||||+++
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~ 105 (486)
T 3mwu_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHPNIMKLFEILEDSSSFYIVGELYTG 105 (486)
T ss_dssp EEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhC-CCCCcCeEEEEEEcCCEEEEEEEcCCC
Confidence 478999999999999976 6899999998643 23567899999999999 999999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEec---CCCCeEEeecccccccCCC
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLT---QDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~---~~~~~ki~DfG~a~~~~~~ 491 (627)
|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++ .++.+||+|||+++.....
T Consensus 106 ~~L~~~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 177 (486)
T 3mwu_A 106 GELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (486)
T ss_dssp CBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC
Confidence 9999998765 35899999999999999999999998 99999999999995 4567999999999876443
Q ss_pred ---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006884 492 ---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 492 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
....||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... ......+......... ..
T Consensus 178 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~~~~~~~~-----~~ 245 (486)
T 3mwu_A 178 TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE------YDILKRVETGKYAFDL-----PQ 245 (486)
T ss_dssp ----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCCSCS-----GG
T ss_pred CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCCCCCC-----cc
Confidence 24468999999999876 599999999999999999999999975421 1222222221111100 00
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 569 YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
. ......+.+++.+||+.+|++|||+.|++++
T Consensus 246 ~---~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 246 W---RTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp G---GGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred c---CCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1 1122356678889999999999999999984
No 185
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-37 Score=336.73 Aligned_cols=181 Identities=27% Similarity=0.431 Sum_probs=147.0
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeC-----CceeEEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSK-----DEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~-----~~~~lv~ 409 (627)
.+.||+|+||.||+|+.+ +++.||||++..... ..+.+.+|++++..+ +||||+++++++... ...++||
T Consensus 58 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 136 (458)
T 3rp9_A 58 RHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRL-NHDHVVKVLDIVIPKDVEKFDELYVVL 136 (458)
T ss_dssp CCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCTTTCCCEEEEE
T ss_pred eeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhC-CCCCCCceEEEEecCCcccCceEEEEE
Confidence 478999999999999965 689999999865432 346788999999999 999999999998543 5689999
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||+ +|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 137 e~~-~~~L~~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 207 (458)
T 3rp9_A 137 EIA-DSDFKKLFRTP-----VYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207 (458)
T ss_dssp CCC-SEEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred ecc-ccchhhhcccC-----CCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccchhcc
Confidence 998 57999998753 35899999999999999999999998 9999999999999999999999999998764
Q ss_pred CC-------------------------------CCCCCCccccCcccc-CCCCCCCcchhHHHHHHHHHHHh
Q 006884 490 FP-------------------------------TTATRTIGYRAPEVT-ETRKASQKSDVYSFGVLLLEMLT 529 (627)
Q Consensus 490 ~~-------------------------------~~~~~t~~y~aPE~~-~~~~~~~~~Dv~S~Gvvl~el~t 529 (627)
.. ....||+.|+|||++ ....++.++|||||||++|||++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt 279 (458)
T 3rp9_A 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279 (458)
T ss_dssp SCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred CccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence 21 223468999999986 56679999999999999999999
No 186
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=7.9e-38 Score=332.41 Aligned_cols=194 Identities=23% Similarity=0.425 Sum_probs=153.4
Q ss_pred hcccCcCCceEEEEEEEc---CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEee--CCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE---DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS--KDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~--~~~~~lv~e~~~ 413 (627)
.++||+|+||.||+|+.+ +++.||||++.... ....+.+|++++..+ +||||+++++++.. ....++||||+.
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~lv~e~~~ 103 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG-ISMSACREIALLREL-KHPNVISLQKVFLSHADRKVWLLFDYAE 103 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSS-CCHHHHHHHHHHHHC-CCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC-CCHHHHHHHHHHHhc-CCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence 457999999999999965 47889999987543 345688999999999 89999999999964 567899999996
Q ss_pred CCcHHHHhhhcCC----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe----cCCCCeEEeecccc
Q 006884 414 AGSLFMLLHRNRS----DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL----TQDLNGCISDVGLA 485 (627)
Q Consensus 414 ~gsL~~~l~~~~~----~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl----~~~~~~ki~DfG~a 485 (627)
|+|.+++..... .....+++..++.++.|++.||.|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 104 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 179 (405)
T 3rgf_A 104 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 179 (405)
T ss_dssp -EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCEEECCTTCC
T ss_pred -CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcEEEEECCCc
Confidence 588888764321 11235899999999999999999999998 9999999999999 77899999999999
Q ss_pred cccCCC-------CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 006884 486 HLINFP-------TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSG 538 (627)
Q Consensus 486 ~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~ 538 (627)
+..... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 240 (405)
T 3rgf_A 180 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 240 (405)
T ss_dssp C----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred eecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence 876432 23457999999999877 458999999999999999999999997654
No 187
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=2.4e-37 Score=319.39 Aligned_cols=249 Identities=18% Similarity=0.276 Sum_probs=191.9
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEee--CCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS--KDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~--~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|+.. +++.||||++.. ...+.+.+|++++..+..||||+++++++.. ....++||||++++
T Consensus 41 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~ 118 (330)
T 3nsz_A 41 VRKLGRGKYSEVFEAINITNNEKVVVKILKP--VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNT 118 (330)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECS--CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCC
T ss_pred EEEecccCCeEEEEEEECCCCcEEEEEEecc--cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCch
Confidence 478999999999999864 689999999864 3467899999999999669999999999987 56789999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC-CeEEeecccccccCCC---
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL-NGCISDVGLAHLINFP--- 491 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~-~~ki~DfG~a~~~~~~--- 491 (627)
+|.+++.. +++..+..++.|++.||.|||+.+ |+||||||+|||++.++ .+||+|||+++.....
T Consensus 119 ~l~~~~~~--------~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~ 187 (330)
T 3nsz_A 119 DFKQLYQT--------LTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY 187 (330)
T ss_dssp CHHHHGGG--------CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCC
T ss_pred hHHHHHHh--------CCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCcc
Confidence 99998852 788999999999999999999998 99999999999999777 8999999999866432
Q ss_pred CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccc-------ccc
Q 006884 492 TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAE-------VFD 563 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d 563 (627)
....++..|+|||++.+ ..++.++||||||+++|||++|+.||...... ...+..... ........+ ..+
T Consensus 188 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~-~~~l~~~~~-~~~~~~~~~~~~~~~~~~~ 265 (330)
T 3nsz_A 188 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-YDQLVRIAK-VLGTEDLYDYIDKYNIELD 265 (330)
T ss_dssp CSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH-HHHHHHHHH-HHCHHHHHHHHHHTTCCCC
T ss_pred ccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch-HHHHHHHHH-hcCCchhhhHHHHhccccc
Confidence 33457889999999877 67899999999999999999999999643211 000111000 000000000 000
Q ss_pred hh---------------hhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 564 VE---------------LLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 564 ~~---------------l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
+. ............++.+++.+||+.||++|||++|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 266 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp THHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00 0000111112356778899999999999999999987
No 188
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.6e-37 Score=313.69 Aligned_cols=237 Identities=21% Similarity=0.339 Sum_probs=196.6
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccc----ccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV----AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.. +++.||+|++... ....+.+.+|++++..+ +||||+++++++.+.+..++||||++
T Consensus 19 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 97 (284)
T 2vgo_A 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RHPNILRMYNYFHDRKRIYLMLEFAP 97 (284)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred eheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcC-CCCCEeeEEEEEEcCCEEEEEEEeCC
Confidence 478999999999999976 5788999998643 23457789999999999 89999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 98 ~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 169 (284)
T 2vgo_A 98 RGELYKELQKHG-----RFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR 169 (284)
T ss_dssp TEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEECSSSCB
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccCccccc
Confidence 999999998652 5899999999999999999999998 999999999999999999999999998765432
Q ss_pred CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006884 492 TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
....+++.|+|||++.+..++.++||||||+++|||++|+.||..... ......+..... . ....
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~~~~~-------~--~~~~ 234 (284)
T 2vgo_A 170 RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH------TETHRRIVNVDL-------K--FPPF 234 (284)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHTTCC-------C--CCTT
T ss_pred ccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH------hHHHHHHhcccc-------C--CCCc
Confidence 345688999999999998999999999999999999999999975321 111112111110 0 0011
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
....+.+++.+|++.+|.+||+++|+++
T Consensus 235 ---~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 235 ---LSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp ---SCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---CCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 1235667888999999999999999987
No 189
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=7.5e-38 Score=323.94 Aligned_cols=254 Identities=20% Similarity=0.306 Sum_probs=197.7
Q ss_pred hcccCcCCceEEEEEEE-c-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCC------ceeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAIL-E-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHS------NVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~------niv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||++.. . +++.||||+++......+.+.+|++++..+ +|+ +++++++++...+..++|||
T Consensus 19 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~~~~~~~~~~i~~~~~~~~~~~~~~lv~e 97 (339)
T 1z57_A 19 VDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHL-NTTDPNSTFRCVQMLEWFEHHGHICIVFE 97 (339)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHH-HHHCTTCTTCBCCEEEEEEETTEEEEEEE
T ss_pred EEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHh-hhcCCCCceeeEeeecccccCCcEEEEEc
Confidence 47899999999999986 3 688999999976555567788999999888 544 59999999999999999999
Q ss_pred cCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC-----------------
Q 006884 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ----------------- 473 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~----------------- 473 (627)
|+ +++|.+++.... ...+++..+..++.|++.||.|||+++ |+||||||+|||++.
T Consensus 98 ~~-~~~l~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~ 170 (339)
T 1z57_A 98 LL-GLSTYDFIKENG---FLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170 (339)
T ss_dssp CC-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred CC-CCCHHHHHHhcC---CCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCcccccccc
Confidence 99 889999997653 246899999999999999999999998 999999999999987
Q ss_pred --CCCeEEeecccccccCCC-CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHH
Q 006884 474 --DLNGCISDVGLAHLINFP-TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVR 550 (627)
Q Consensus 474 --~~~~ki~DfG~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~ 550 (627)
++.+||+|||+++..... ....+|+.|+|||++.+..++.++||||||+++|||++|+.||......+ ....+.
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~---~~~~~~ 247 (339)
T 1z57_A 171 LINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE---HLAMME 247 (339)
T ss_dssp ESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH---HHHHHH
T ss_pred ccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH---HHHHHH
Confidence 678999999999876543 34568999999999999999999999999999999999999997543211 111111
Q ss_pred HHhhh--------cccccccc---------------------hhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 006884 551 SVVRE--------EWTAEVFD---------------------VELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVV 601 (627)
Q Consensus 551 ~~~~~--------~~~~~~~d---------------------~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~ 601 (627)
..... ......+. ...............+.+++.+||+.||++|||++|++
T Consensus 248 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell 327 (339)
T 1z57_A 248 RILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREAL 327 (339)
T ss_dssp HHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred HHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHh
Confidence 11100 00000000 00000111234456788999999999999999999998
Q ss_pred HH
Q 006884 602 RM 603 (627)
Q Consensus 602 ~~ 603 (627)
++
T Consensus 328 ~h 329 (339)
T 1z57_A 328 KH 329 (339)
T ss_dssp TS
T ss_pred cC
Confidence 63
No 190
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1e-37 Score=350.91 Aligned_cols=238 Identities=23% Similarity=0.324 Sum_probs=196.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccc----ccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV----AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.+ +++.||||+++.. ....+.+..|.+++..+.+||+|+.+++++.+.+..++||||++
T Consensus 346 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~ 425 (674)
T 3pfq_A 346 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 425 (674)
T ss_dssp EEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCC
T ss_pred EEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcC
Confidence 468999999999999976 5789999999753 23446678888999888789999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC---
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF--- 490 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~--- 490 (627)
+|+|.+++.... .+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 426 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~ 497 (674)
T 3pfq_A 426 GGDLMYHIQQVG-----RFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 497 (674)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCEECCCTTC
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceeeccccCCc
Confidence 999999998652 5899999999999999999999998 99999999999999999999999999986422
Q ss_pred -CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 491 -PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 491 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
..+..||+.|+|||++.+..++.++|||||||++|||++|+.||...+. ......+...... + .
T Consensus 498 ~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~------~~~~~~i~~~~~~---~------p 562 (674)
T 3pfq_A 498 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE------DELFQSIMEHNVA---Y------P 562 (674)
T ss_dssp CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHSSCCC---C------C
T ss_pred ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH------HHHHHHHHhCCCC---C------C
Confidence 2345689999999999999999999999999999999999999976421 2222232221110 0 0
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKM-----DDVVR 602 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~-----~ev~~ 602 (627)
.. ...++.+++.+||+.||++||++ +||++
T Consensus 563 ~~---~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 563 KS---MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp TT---SCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred cc---CCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 11 22356778889999999999998 77765
No 191
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4e-37 Score=322.31 Aligned_cols=251 Identities=21% Similarity=0.342 Sum_probs=189.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCC------ceeEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD------EKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~------~~~lv 408 (627)
.+.||+|+||.||+|... +|+.||||++..... ..+.+.+|++++..+ +||||+++++++.... ..++|
T Consensus 30 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~~~~~~~lv 108 (367)
T 1cm8_A 30 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-RHENVIGLLDVFTPDETLDDFTDFYLV 108 (367)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-CBTTBCCCSEEECSCSSTTTCCCCEEE
T ss_pred eEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-CCcCCCCceeeEecCCccccCceEEEE
Confidence 478999999999999975 689999999865432 245688999999999 8999999999997653 45999
Q ss_pred EecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 409 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
|||+ +++|.+++... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 109 ~e~~-~~~L~~~~~~~------~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 178 (367)
T 1cm8_A 109 MPFM-GTDLGKLMKHE------KLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQA 178 (367)
T ss_dssp EECC-SEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EecC-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence 9999 88999999753 4899999999999999999999998 999999999999999999999999999876
Q ss_pred CCC-CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhc-cc-c-----
Q 006884 489 NFP-TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREE-WT-A----- 559 (627)
Q Consensus 489 ~~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~-~~-~----- 559 (627)
... ....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+.. ..+..+.... .. .
T Consensus 179 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~l~~i~~~~g~~~~~~~~~ 252 (367)
T 1cm8_A 179 DSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL------DQLKEIMKVTGTPPAEFVQR 252 (367)
T ss_dssp CSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHHHCCCCHHHHHT
T ss_pred ccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHhcCCCCHHHHHH
Confidence 543 34568999999999876 67999999999999999999999999864321 1111111100 00 0
Q ss_pred --------------cccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhc
Q 006884 560 --------------EVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM--IEQIQ 608 (627)
Q Consensus 560 --------------~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~--L~~~~ 608 (627)
......+.. ..+.....+.+++.+||..||++|||++|++++ ++.+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~ 315 (367)
T 1cm8_A 253 LQSDEAKNYMKGLPELEKKDFAS--ILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 315 (367)
T ss_dssp CSCHHHHHHHHHSCCCCCCCGGG--TCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred hhhHHHHHHHHhCCCCCCCCHHH--HCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence 000000000 001123456788889999999999999999883 54443
No 192
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-37 Score=318.36 Aligned_cols=242 Identities=24% Similarity=0.378 Sum_probs=191.5
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEee------CCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS------KDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~------~~~~~lv~e~ 411 (627)
.+.||+|+||.||+|+.. +++.||||++.......+.+.+|++++.++.+||||+++++++.. .+..++||||
T Consensus 29 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~ 108 (326)
T 2x7f_A 29 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEF 108 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEEC
T ss_pred EEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEc
Confidence 478999999999999974 689999999976666678899999999999889999999999987 4578999999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 491 (627)
+++|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 109 ~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 182 (326)
T 2x7f_A 109 CGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 182 (326)
T ss_dssp CTTEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCTTTC-----
T ss_pred CCCCcHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCCEEEeeCcCceecCcC
Confidence 99999999998643 246899999999999999999999998 999999999999999999999999999876432
Q ss_pred ----CCCCCCccccCccccC-----CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006884 492 ----TTATRTIGYRAPEVTE-----TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 492 ----~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
....+++.|+|||++. +..++.++||||||+++|||++|+.||..... ........... .....
T Consensus 183 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~-~~~~~ 255 (326)
T 2x7f_A 183 VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP------MRALFLIPRNP-APRLK 255 (326)
T ss_dssp --------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHSC-CCCCS
T ss_pred ccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcH------HHHHHHhhcCc-cccCC
Confidence 2345789999999986 56789999999999999999999999965321 11111111111 11110
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.... ...+.+++.+||..+|++||+++++++
T Consensus 256 ------~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 256 ------SKKW---SKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp ------CSCS---CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ------cccc---CHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 1111 235677888999999999999999988
No 193
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=5.9e-37 Score=312.51 Aligned_cols=240 Identities=23% Similarity=0.351 Sum_probs=198.1
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccc--ccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV--AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|+.. +++.||+|++... ....+.+.+|+.++..+ +||||+++++++...+..++||||++++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 105 (303)
T 3a7i_A 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKDTKLWIIMEYLGGG 105 (303)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred hhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCCeEEEEEEeCCCC
Confidence 478999999999999965 6889999998654 23467899999999999 9999999999999999999999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~---- 491 (627)
+|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 106 ~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 176 (303)
T 3a7i_A 106 SALDLLEP------GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR 176 (303)
T ss_dssp EHHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCB
T ss_pred cHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCcccccc
Confidence 99999864 25899999999999999999999998 999999999999999999999999999776432
Q ss_pred CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006884 492 TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
....+++.|+|||++.+..++.++||||||+++|||++|+.||..... ...... ........ +. ..
T Consensus 177 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~-~~~~~~~~-~~------~~ 242 (303)
T 3a7i_A 177 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP------MKVLFL-IPKNNPPT-LE------GN 242 (303)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHH-HHHSCCCC-CC------SS
T ss_pred CccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH------HHHHHH-hhcCCCCC-Cc------cc
Confidence 234578999999999999999999999999999999999999975321 111111 11111110 00 11
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 006884 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~ 605 (627)
....+.+++.+||+.+|++|||+.|++++..
T Consensus 243 ---~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~ 273 (303)
T 3a7i_A 243 ---YSKPLKEFVEACLNKEPSFRPTAKELLKHKF 273 (303)
T ss_dssp ---CCHHHHHHHHHHCCSSGGGSCCHHHHTTCHH
T ss_pred ---cCHHHHHHHHHHcCCChhhCcCHHHHhhChh
Confidence 1235677888999999999999999988543
No 194
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.5e-37 Score=321.10 Aligned_cols=254 Identities=24% Similarity=0.346 Sum_probs=191.9
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccC---HHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAAT---KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||+++.. +++.||||++...... .+.+.+|++++..+ +||||+++++++...+..++||||+++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 108 (331)
T 4aaa_A 30 LGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL-RHENLVNLLEVCKKKKRWYLVFEFVDH 108 (331)
T ss_dssp EEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhC-CCCCEeeEEEEeecCCEEEEEEecCCc
Confidence 478999999999999976 5899999998654332 45678899999999 899999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 109 ~~l~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 180 (331)
T 4aaa_A 109 TILDDLELFP-----NGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV 180 (331)
T ss_dssp EHHHHHHHST-----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred chHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeecCCccc
Confidence 9998887643 35899999999999999999999998 999999999999999999999999999775432
Q ss_pred -CCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHH----------HHhh-hccc
Q 006884 492 -TTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVR----------SVVR-EEWT 558 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~----------~~~~-~~~~ 558 (627)
....+++.|+|||++.+. .++.++||||||+++|||++|+.||......+ .+..... .... ....
T Consensus 181 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
T 4aaa_A 181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID--QLYHIMMCLGNLIPRHQELFNKNPVF 258 (331)
T ss_dssp ---CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH--HHHHHHHHhCCCChhhhhHhhhcccc
Confidence 234578999999998775 78999999999999999999999997643211 0000000 0000 0000
Q ss_pred ccccchhhhcCCCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 559 AEVFDVELLKYQDV----EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 559 ~~~~d~~l~~~~~~----~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.....+........ +.....+.+++.+||+.||++|||++|++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp TTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000000000000 1123467788899999999999999999873
No 195
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.8e-37 Score=314.65 Aligned_cols=241 Identities=20% Similarity=0.335 Sum_probs=191.5
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccc-ccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCc
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV-AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
.+.||+|+||.||+|... +++.||+|++... ....+.+.+|++++..+ +||||+++++++...+..++||||+++++
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 102 (302)
T 2j7t_A 24 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATC-DHPYIVKLLGAYYHDGKLWIMIEFCPGGA 102 (302)
T ss_dssp EEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHC-CCTTBCCEEEEEECC-CEEEEEECCTTEE
T ss_pred cceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcC-CCCCEeeeeeeeeeCCeEEEEEEeCCCCc
Confidence 467999999999999976 5889999998654 34567899999999999 99999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc----CCCC
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI----NFPT 492 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~----~~~~ 492 (627)
|.+++.... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++... ....
T Consensus 103 l~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 175 (302)
T 2j7t_A 103 VDAIMLELD----RGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD 175 (302)
T ss_dssp HHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC--
T ss_pred HHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCccccccccccc
Confidence 999987642 35899999999999999999999998 999999999999999999999999987543 1233
Q ss_pred CCCCCccccCcccc-----CCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006884 493 TATRTIGYRAPEVT-----ETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 493 ~~~~t~~y~aPE~~-----~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
...+++.|+|||++ .+..++.++||||||+++|||++|+.||.... .............. ...
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~~-~~~----- 243 (302)
T 2j7t_A 176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN------PMRVLLKIAKSDPP-TLL----- 243 (302)
T ss_dssp ---CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHSCCC-CCS-----
T ss_pred cccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC------HHHHHHHHhccCCc-ccC-----
Confidence 45688999999998 46678999999999999999999999997542 11222222211111 100
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
........+.+++.+||+.+|++|||+.|+++
T Consensus 244 ---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 244 ---TPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp ---SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred ---CccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 01112235678889999999999999999976
No 196
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.7e-37 Score=318.16 Aligned_cols=240 Identities=24% Similarity=0.361 Sum_probs=193.1
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
.+.||+|+||.||+|..+ +|+.||+|.+.... ..+.+.+|++++..+ +||||+++++++...+..++||||+++|+|
T Consensus 34 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 111 (314)
T 3com_A 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQC-DSPHVVKYYGSYFKNTDLWIVMEYCGAGSV 111 (314)
T ss_dssp EEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred heeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhC-CCCCCccEEEEEEeCCEEEEEeecCCCCCH
Confidence 478999999999999976 58999999987543 456789999999999 999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----CC
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TT 493 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~----~~ 493 (627)
.+++... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++...... ..
T Consensus 112 ~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 184 (314)
T 3com_A 112 SDIIRLR----NKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 184 (314)
T ss_dssp HHHHHHH----TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCC
T ss_pred HHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCc
Confidence 9999743 246899999999999999999999998 999999999999999999999999999765432 23
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChH
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVE 573 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 573 (627)
..+++.|+|||++.+..++.++||||||+++|||++|+.||..... ........ ........ ...
T Consensus 185 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~-~~~~~~~~--------~~~ 249 (314)
T 3com_A 185 VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP------MRAIFMIP-TNPPPTFR--------KPE 249 (314)
T ss_dssp CCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHH-HSCCCCCS--------SGG
T ss_pred cCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHh-cCCCcccC--------Ccc
Confidence 4578899999999998999999999999999999999999975321 11111111 11111100 011
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 574 EEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 574 ~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.....+.+++.+||..+|.+|||+.++++
T Consensus 250 ~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 250 LWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp GSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 12245778889999999999999999987
No 197
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=7.9e-38 Score=325.96 Aligned_cols=252 Identities=22% Similarity=0.307 Sum_probs=191.6
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeC--------Ccee
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSK--------DEKL 406 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~--------~~~~ 406 (627)
.+.||+|+||.||+|+.. +++.||||++.... .....+.+|++++..+ +||||+++++++... +..+
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~~~ 100 (351)
T 3mi9_A 22 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEICRTKASPYNRCKGSIY 100 (351)
T ss_dssp EEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHC-CCTTBCCEEEEEEEC--------CEEE
T ss_pred EEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhc-cCCCcccHhheeeccccccccCCceEE
Confidence 478999999999999974 78999999986442 2345788999999999 899999999999873 4578
Q ss_pred EEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccc
Q 006884 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH 486 (627)
Q Consensus 407 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 486 (627)
+||||+++ +|.+.+.... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 101 lv~e~~~~-~l~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 172 (351)
T 3mi9_A 101 LVFDFCEH-DLAGLLSNVL----VKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLAR 172 (351)
T ss_dssp EEEECCSE-EHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEeccCC-CHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence 99999975 7777776432 35899999999999999999999998 9999999999999999999999999997
Q ss_pred ccCCC--------CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcc
Q 006884 487 LINFP--------TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEW 557 (627)
Q Consensus 487 ~~~~~--------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 557 (627)
..... ....+|+.|+|||++.+ ..++.++||||||+++|||++|+.||......+ ....+.......
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~i~~~~~~~- 248 (351)
T 3mi9_A 173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH---QLALISQLCGSI- 248 (351)
T ss_dssp ECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCC-
T ss_pred cccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCCC-
Confidence 65321 23457899999999876 458999999999999999999999998643211 111111111100
Q ss_pred cccccc----hh--------hhcCCChHHH------HHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 558 TAEVFD----VE--------LLKYQDVEEE------MVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 558 ~~~~~d----~~--------l~~~~~~~~~------~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
...... .. ........+. ...+.+++.+||+.||++|||++|++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 249 TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp CTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 000000 00 0001111122 2347789999999999999999999874
No 198
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.9e-37 Score=320.90 Aligned_cols=238 Identities=21% Similarity=0.346 Sum_probs=196.3
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||++... +++.||+|++.... ...+.+.+|+.++..+ +||||+++++++.+.+..++||||++
T Consensus 46 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 124 (335)
T 2owb_A 46 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCR 124 (335)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCeEEEEEecCC
Confidence 478999999999999976 57899999986542 2346788899999999 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+++|.+++... ..+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 125 ~~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 196 (335)
T 2owb_A 125 RRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 196 (335)
T ss_dssp TCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred CCCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceecccCcc
Confidence 99999998764 35899999999999999999999998 999999999999999999999999999876422
Q ss_pred --CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 492 --TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
....+++.|+|||++.+..++.++||||||+++|||++|+.||.... .......+...... + .
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~~~~~---~------~ 261 (335)
T 2owb_A 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC------LKETYLRIKKNEYS---I------P 261 (335)
T ss_dssp CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHTCCC---C------C
T ss_pred cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC------HHHHHHHHhcCCCC---C------C
Confidence 23457899999999998889999999999999999999999997532 11212111111110 0 0
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.. ....+.+++.+||+.||++|||++|++++
T Consensus 262 ~~---~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 262 KH---INPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp TT---SCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cc---CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11 12346678889999999999999999974
No 199
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.2e-37 Score=316.30 Aligned_cols=238 Identities=21% Similarity=0.341 Sum_probs=196.2
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||++... +++.||+|++.... ...+.+.+|++++..+ +||||+++++++.+.+..++||||++
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 98 (294)
T 2rku_A 20 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCR 98 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhC-CCCCEeeeeeeeccCCEEEEEEecCC
Confidence 478999999999999976 57899999986542 2346688899999999 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 99 ~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 170 (294)
T 2rku_A 99 RRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170 (294)
T ss_dssp TCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence 99999998764 35899999999999999999999998 999999999999999999999999999876422
Q ss_pred --CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 492 --TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
....+++.|+|||++.+..++.++||||||+++|||++|+.||.... .............. ..
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~~~~~---------~~ 235 (294)
T 2rku_A 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC------LKETYLRIKKNEYS---------IP 235 (294)
T ss_dssp CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHTTCCC---------CC
T ss_pred ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHhhccCC---------Cc
Confidence 23457889999999999889999999999999999999999997532 11111111111100 00
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.. ....+.+++.+||+.+|++|||++|++++
T Consensus 236 ~~---~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 236 KH---INPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp TT---SCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cc---cCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 11 12356678889999999999999999884
No 200
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=315.99 Aligned_cols=243 Identities=24% Similarity=0.331 Sum_probs=192.6
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
..||+|+||.||+|... +++.||||.+.... ...+.+.+|+.++..+ +||||+++++++...+..++||||+++++|
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 106 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHL-KHKNIVQYLGSFSENGFIKIFMEQVPGGSL 106 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCSEEEH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhC-CCCCEeeEeeEEEeCCcEEEEEEeCCCCCH
Confidence 47999999999999964 68899999987543 3457789999999999 999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC-CCCeEEeecccccccCC----CC
Q 006884 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ-DLNGCISDVGLAHLINF----PT 492 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~-~~~~ki~DfG~a~~~~~----~~ 492 (627)
.+++..... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++. ++.+||+|||+++.... ..
T Consensus 107 ~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~ 181 (295)
T 2clq_A 107 SALLRSKWG--PLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE 181 (295)
T ss_dssp HHHHHHTTC--CCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----C
T ss_pred HHHHHhhcc--CCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCCCCCccc
Confidence 999986432 345678999999999999999999998 999999999999987 89999999999987643 23
Q ss_pred CCCCCccccCccccCCC--CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006884 493 TATRTIGYRAPEVTETR--KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~--~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
...+++.|+|||++.+. .++.++||||||+++|||++|+.||...... ............... +
T Consensus 182 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~-----~---- 247 (295)
T 2clq_A 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP-----QAAMFKVGMFKVHPE-----I---- 247 (295)
T ss_dssp CCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSH-----HHHHHHHHHHCCCCC-----C----
T ss_pred ccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCch-----hHHHHhhcccccccc-----c----
Confidence 44678999999998764 3889999999999999999999999743211 110111000000000 0
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 571 DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.......+.+++.+||+.+|++||+++|++++
T Consensus 248 -~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 248 -PESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp -CTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred -cccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 01122356678889999999999999999763
No 201
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.2e-37 Score=325.19 Aligned_cols=258 Identities=19% Similarity=0.295 Sum_probs=195.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhc----------cCCceeceeeEEeeCC----
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIG----------KHSNVVPVRAYYYSKD---- 403 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~----------~h~niv~~~~~~~~~~---- 403 (627)
.+.||+|+||.||+|+.. +++.||||++.......+.+.+|++++.++. .|+||+++++++...+
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 103 (373)
T 1q8y_A 24 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGV 103 (373)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEE
T ss_pred EEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCc
Confidence 478999999999999964 6899999999765555677889999988874 2899999999998654
Q ss_pred ceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCCeEec------CCCC
Q 006884 404 EKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE-GGAKFTHGNIKSSNVLLT------QDLN 476 (627)
Q Consensus 404 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dlkp~NILl~------~~~~ 476 (627)
..++||||+ +++|.+++.... ...+++..+..++.|++.||.|||++ + |+||||||+|||++ .++.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~~~~~~~~ 176 (373)
T 1q8y_A 104 HVVMVFEVL-GENLLALIKKYE---HRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPENLIQ 176 (373)
T ss_dssp EEEEEECCC-CEEHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETTTTEEE
T ss_pred eEEEEEecC-CCCHHHHHHHhh---ccCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccCCCcCcce
Confidence 678999999 899999998643 23589999999999999999999998 8 99999999999994 4457
Q ss_pred eEEeecccccccCCC-CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhh
Q 006884 477 GCISDVGLAHLINFP-TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVRE 555 (627)
Q Consensus 477 ~ki~DfG~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 555 (627)
+||+|||+++..... ....+|+.|+|||++.+..++.++||||||+++|||++|+.||..............+..+...
T Consensus 177 ~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 256 (373)
T 1q8y_A 177 IKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIEL 256 (373)
T ss_dssp EEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHH
T ss_pred EEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHh
Confidence 999999999876543 3456899999999999999999999999999999999999999865433222211222111110
Q ss_pred --cccc----------ccc------------------chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 556 --EWTA----------EVF------------------DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 556 --~~~~----------~~~------------------d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.... ..+ +...............+.+++.+||+.||++|||++|++++
T Consensus 257 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 334 (373)
T 1q8y_A 257 LGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 334 (373)
T ss_dssp HCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred cCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhC
Confidence 0000 000 00001112234566788899999999999999999999883
No 202
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=4.3e-37 Score=309.03 Aligned_cols=238 Identities=20% Similarity=0.346 Sum_probs=189.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccc----ccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV----AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|... +++.||||++... ....+.+.+|++++..+ +||||+++++++...+..++||||++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 94 (276)
T 2h6d_A 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF-RHPHIIKLYQVISTPTDFFMVMEYVS 94 (276)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcC-CCCCEeEEEEEEecCCeEEEEEeccC
Confidence 478999999999999976 6899999998643 23456789999999999 89999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 95 ~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 166 (276)
T 2h6d_A 95 GGELFDYICKH-----GRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 166 (276)
T ss_dssp SCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---
T ss_pred CCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccccccCCCcc
Confidence 99999999765 24899999999999999999999998 999999999999999999999999999876543
Q ss_pred -CCCCCCccccCccccCCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 492 -TTATRTIGYRAPEVTETRKA-SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
....+++.|+|||++.+..+ +.++||||||+++|||++|+.||.... .......+. ..... + .
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~-~~~~~--~------~ 231 (276)
T 2h6d_A 167 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH------VPTLFKKIR-GGVFY--I------P 231 (276)
T ss_dssp ----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHH-HCCCC--C------C
T ss_pred eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc------HHHHHHHhh-cCccc--C------c
Confidence 23457889999999988765 689999999999999999999997532 112222111 11100 0 0
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
......+.+++.+||+.+|++|||++|++++
T Consensus 232 ---~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 232 ---EYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp ---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ---hhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 1112356778889999999999999999984
No 203
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=9.7e-38 Score=322.23 Aligned_cols=248 Identities=20% Similarity=0.306 Sum_probs=185.6
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||+|+.. +++.||||+++.... ..+.+.+|++++..+ +||||+++++++...+..++||||++
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~- 116 (329)
T 3gbz_A 39 ITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKEL-QHRNIIELKSVIHHNHRLHLIFEYAE- 116 (329)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGC-CCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred EEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHc-CCCCcceEEEEEecCCEEEEEEecCC-
Confidence 478999999999999965 688999999865432 235678899999999 99999999999999999999999997
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEec-----CCCCeEEeecccccccC
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLT-----QDLNGCISDVGLAHLIN 489 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~-----~~~~~ki~DfG~a~~~~ 489 (627)
|+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+|||++ .++.+||+|||+++...
T Consensus 117 ~~L~~~~~~~~-----~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~ 188 (329)
T 3gbz_A 117 NDLKKYMDKNP-----DVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188 (329)
T ss_dssp EEHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred CCHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence 59999998652 4899999999999999999999998 99999999999994 45569999999997664
Q ss_pred CC----CCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhc-cccc-cc
Q 006884 490 FP----TTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREE-WTAE-VF 562 (627)
Q Consensus 490 ~~----~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~ 562 (627)
.. ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||..... ......+.... .... ..
T Consensus 189 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~~~~~~~~~~~~~~~ 262 (329)
T 3gbz_A 189 IPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE------IDQLFKIFEVLGLPDDTTW 262 (329)
T ss_dssp -----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHHHCCCCTTTS
T ss_pred CcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCH------HHHHHHHHHHhCCCchhhh
Confidence 32 234568999999999774 489999999999999999999999975421 11111111100 0000 00
Q ss_pred ---------chhhh--cCCChHH-----HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 563 ---------DVELL--KYQDVEE-----EMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 563 ---------d~~l~--~~~~~~~-----~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
..... ....... ...++.+++.+||+.||++|||++|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 263 PGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 00000 0000111 1245678899999999999999999976
No 204
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2.2e-37 Score=326.44 Aligned_cols=194 Identities=22% Similarity=0.327 Sum_probs=167.1
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCc-----eeceeeEEeeCCceeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSN-----VVPVRAYYYSKDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~n-----iv~~~~~~~~~~~~~lv~e~~ 412 (627)
.+.||+|+||.||+|+.. +++.||||+++.......++..|++++..+..|++ ++.+.+++...+..++||||+
T Consensus 59 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~ 138 (382)
T 2vx3_A 59 DSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML 138 (382)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECC
T ss_pred EEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecC
Confidence 478999999999999976 67899999997654455678889999888866664 899999999999999999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEec--CCCCeEEeecccccccCC
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLT--QDLNGCISDVGLAHLINF 490 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~--~~~~~ki~DfG~a~~~~~ 490 (627)
+ |+|.+++.... ...+++..+..++.|++.||.|||++. .+|+||||||+|||++ .++.+||+|||+++....
T Consensus 139 ~-~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~-~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~ 213 (382)
T 2vx3_A 139 S-YNLYDLLRNTN---FRGVSLNLTRKFAQQMCTALLFLATPE-LSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 213 (382)
T ss_dssp C-CBHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHTSTT-TCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred C-CCHHHHHhhcC---cCCCCHHHHHHHHHHHHHHHHHhccCC-CCEEcCCCCcccEEEecCCCCcEEEEeccCceeccc
Confidence 6 59999998653 235899999999999999999999531 2399999999999995 578899999999987754
Q ss_pred C-CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 006884 491 P-TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHS 537 (627)
Q Consensus 491 ~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~ 537 (627)
. ....+|+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 214 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 214 RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 3 3456899999999999999999999999999999999999999864
No 205
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.7e-37 Score=337.65 Aligned_cols=241 Identities=24% Similarity=0.362 Sum_probs=197.1
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccc----ccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV----AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+++.+ +++.||||++... ....+.+.+|++++..+ +||||+++++++.+.+..++|+||+.
T Consensus 31 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~ 109 (484)
T 3nyv_A 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL-DHPNIMKLYEFFEDKGYFYLVGEVYT 109 (484)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEEecCC
Confidence 478999999999999976 7899999998643 23567899999999999 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe---cCCCCeEEeecccccccCC
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL---TQDLNGCISDVGLAHLINF 490 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl---~~~~~~ki~DfG~a~~~~~ 490 (627)
+|+|.+++... ..+++..+..++.|++.||.|||+++ |+||||||+|||+ +.++.+||+|||+++....
T Consensus 110 ~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 110 GGELFDEIISR-----KRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp SCBHHHHHHTC-----SCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 99999998754 35899999999999999999999998 9999999999999 5678999999999987654
Q ss_pred CC---CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006884 491 PT---TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 491 ~~---~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
.. ...||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... ......+........ ..
T Consensus 182 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~~~~~~~-----~~ 249 (484)
T 3nyv_A 182 SKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE------YDILKKVEKGKYTFE-----LP 249 (484)
T ss_dssp CCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCCCC-----SG
T ss_pred ccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHHcCCCCCC-----Cc
Confidence 33 2358999999999876 699999999999999999999999975431 122222222111110 00
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.. ......+.+++.+||+.+|++|||+.|++++
T Consensus 250 ~~---~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 250 QW---KKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp GG---GGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cc---ccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 01 1122356678889999999999999999973
No 206
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-37 Score=322.00 Aligned_cols=250 Identities=20% Similarity=0.293 Sum_probs=191.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccC------HHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAAT------KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||.||+|+.. +|+.||||++...... .+.+.+|++++..+ +||||+++++++...+..++||||
T Consensus 15 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~ 93 (346)
T 1ua2_A 15 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIGLLDAFGHKSNISLVFDF 93 (346)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHC-CCTTBCCEEEEECCTTCCEEEEEC
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhC-CCCCCCeEEEEEeeCCceEEEEEc
Confidence 478999999999999975 5899999998653221 24678999999999 899999999999999999999999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 491 (627)
+++ +|.+++... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 94 ~~~-~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (346)
T 1ua2_A 94 MET-DLEVIIKDN----SLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165 (346)
T ss_dssp CSE-EHHHHHTTC----CSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred CCC-CHHHHHHhc----CcCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence 976 898888754 245888899999999999999999998 999999999999999999999999999876432
Q ss_pred ----CCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhc---ccccccc
Q 006884 492 ----TTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREE---WTAEVFD 563 (627)
Q Consensus 492 ----~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d 563 (627)
....+|+.|+|||++.+. .++.++||||||+++|||++|..||..... ......+.... ......+
T Consensus 166 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~------~~~~~~i~~~~~~~~~~~~~~ 239 (346)
T 1ua2_A 166 NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD------LDQLTRIFETLGTPTEEQWPD 239 (346)
T ss_dssp CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHHHCCCCTTTSSS
T ss_pred cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH------HHHHHHHHHHcCCCChhhhhh
Confidence 234578999999998654 589999999999999999999999975421 11122221110 0000000
Q ss_pred ----hhh---hcCCCh------HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 564 ----VEL---LKYQDV------EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 564 ----~~l---~~~~~~------~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
+.. ...... ......+.+++.+||..||++|||++|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 240 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000 000000 1122467788899999999999999999875
No 207
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.3e-37 Score=313.39 Aligned_cols=252 Identities=22% Similarity=0.302 Sum_probs=196.5
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEee--CCceeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYS--KDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~--~~~~~lv~e~~ 412 (627)
.+.||+|+||.||++... +++.||+|++..... ..+.+.+|++++..+ +||||+++++++.. ....++||||+
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e~~ 89 (279)
T 2w5a_A 11 LYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRTNTTLYIVMEYC 89 (279)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEEGGGTEEEEEEECC
T ss_pred ehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhc-CCCCCCeEEEEEecCCCceEEEEEeCC
Confidence 478999999999999976 689999999875432 346788999999999 89999999998854 56789999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCeeecCCCCCCeEecCCCCeEEeecccccccCC
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEG--GAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF 490 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~--~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 490 (627)
++|+|.+++..... ....+++..+..++.|++.||.|||+.+ ..+|+||||||+||+++.++.+||+|||+++....
T Consensus 90 ~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~ 168 (279)
T 2w5a_A 90 EGGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH 168 (279)
T ss_dssp TTEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC--
T ss_pred CCCCHHHHHHhhcc-cCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeecc
Confidence 99999999976432 1345899999999999999999999986 23499999999999999999999999999987654
Q ss_pred CC----CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhh
Q 006884 491 PT----TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVEL 566 (627)
Q Consensus 491 ~~----~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 566 (627)
.. ...+++.|+|||++.+..++.++||||||+++|||++|+.||..... ...... +........ .
T Consensus 169 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~-i~~~~~~~~-~--- 237 (279)
T 2w5a_A 169 DTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ------KELAGK-IREGKFRRI-P--- 237 (279)
T ss_dssp -CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHH-HHHTCCCCC-C---
T ss_pred ccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH------HHHHHH-HhhcccccC-C---
Confidence 32 23478899999999988999999999999999999999999975421 111111 111111110 0
Q ss_pred hcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006884 567 LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 567 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~ 609 (627)
......+.+++.+||+.+|++||+++|+++.+.....
T Consensus 238 ------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~ 274 (279)
T 2w5a_A 238 ------YRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEH 274 (279)
T ss_dssp ------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGG
T ss_pred ------cccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhh
Confidence 1122356778889999999999999999987655443
No 208
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=4.2e-37 Score=335.20 Aligned_cols=241 Identities=21% Similarity=0.345 Sum_probs=191.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||+|+.+ ++..||+|++.... .....+.+|++++..+ +||||+++++++.+....++||||+++
T Consensus 42 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~ 120 (494)
T 3lij_A 42 VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLL-DHPNIMKLYDFFEDKRNYYLVMECYKG 120 (494)
T ss_dssp EEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence 478999999999999976 68899999987542 2356789999999999 999999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC---CCCeEEeecccccccCCC
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ---DLNGCISDVGLAHLINFP 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~---~~~~ki~DfG~a~~~~~~ 491 (627)
|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 121 g~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~ 192 (494)
T 3lij_A 121 GELFDEIIHR-----MKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192 (494)
T ss_dssp CBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence 9999988764 35899999999999999999999998 999999999999976 455999999999876433
Q ss_pred ---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006884 492 ---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 492 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
....||+.|+|||++. ..++.++||||+||++|+|++|+.||..... ......+........ .+ .
T Consensus 193 ~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~~~~~~~--~~---~ 260 (494)
T 3lij_A 193 KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD------QEILRKVEKGKYTFD--SP---E 260 (494)
T ss_dssp BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCCCC--SG---G
T ss_pred ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCCCCC--ch---h
Confidence 3456899999999986 4689999999999999999999999975431 222222222211100 00 0
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 569 YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.... ...+.+++.+||+.+|.+|||+.|++++
T Consensus 261 ~~~~---s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 261 WKNV---SEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp GTTS---CHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred cccC---CHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 1111 2356678889999999999999999874
No 209
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2.5e-37 Score=337.85 Aligned_cols=241 Identities=21% Similarity=0.346 Sum_probs=193.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc--------------cCHHHHHHHHHHHHHhccCCceeceeeEEeeCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--------------ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD 403 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------------~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~ 403 (627)
.+.||+|+||.||+|+.+ +++.||+|++.... ...+.+.+|++++..+ +||||+++++++.+..
T Consensus 41 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~ 119 (504)
T 3q5i_A 41 VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL-DHPNIIKLFDVFEDKK 119 (504)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTC-CCTTBCCEEEEEECSS
T ss_pred EeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCC
Confidence 478999999999999976 57899999986542 2356789999999999 8999999999999999
Q ss_pred ceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC---CeEEe
Q 006884 404 EKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL---NGCIS 480 (627)
Q Consensus 404 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~---~~ki~ 480 (627)
..++||||+++|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++ .+||+
T Consensus 120 ~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~ 191 (504)
T 3q5i_A 120 YFYLVTEFYEGGELFEQIINR-----HKFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIV 191 (504)
T ss_dssp EEEEEEECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCSSEEEC
T ss_pred EEEEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCccEEEE
Confidence 999999999999999999764 35899999999999999999999998 99999999999998876 69999
Q ss_pred ecccccccCCC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcc
Q 006884 481 DVGLAHLINFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEW 557 (627)
Q Consensus 481 DfG~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 557 (627)
|||+++..... ....||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... ......+.....
T Consensus 192 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~~~~ 264 (504)
T 3q5i_A 192 DFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQND------QDIIKKVEKGKY 264 (504)
T ss_dssp CCTTCEECCTTSCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCC
T ss_pred ECCCCEEcCCCCccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHcCCC
Confidence 99999876543 34568999999999874 689999999999999999999999975431 222222222111
Q ss_pred cccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 558 TAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 558 ~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
. ++.. .... ...++.+++.+||..+|.+|||++|++++
T Consensus 265 ~---~~~~--~~~~---~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 265 Y---FDFN--DWKN---ISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp C---CCHH--HHTT---SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred C---CCcc--ccCC---CCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1 0100 0011 12356778889999999999999999874
No 210
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=7.4e-37 Score=310.91 Aligned_cols=242 Identities=19% Similarity=0.341 Sum_probs=195.3
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----------cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----------ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLV 407 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----------~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~l 407 (627)
.+.||+|+||.||+|..+ +++.||||++.... ...+.+.+|++++.++.+||||+++++++...+..++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~l 101 (298)
T 1phk_A 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFL 101 (298)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred eeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEE
Confidence 478999999999999976 68899999986432 1235678899999999669999999999999999999
Q ss_pred EEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccc
Q 006884 408 VYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHL 487 (627)
Q Consensus 408 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~ 487 (627)
||||+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++..
T Consensus 102 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 173 (298)
T 1phk_A 102 VFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQ 173 (298)
T ss_dssp EEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEecccchhh
Confidence 99999999999999864 35899999999999999999999998 99999999999999999999999999987
Q ss_pred cCCC---CCCCCCccccCccccC------CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006884 488 INFP---TTATRTIGYRAPEVTE------TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 488 ~~~~---~~~~~t~~y~aPE~~~------~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
.... ....+++.|+|||++. ...++.++||||||+++|||++|+.||..... ......+......
T Consensus 174 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~~~~~ 247 (298)
T 1phk_A 174 LDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ------MLMLRMIMSGNYQ 247 (298)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCC
T ss_pred cCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH------HHHHHHHhcCCcc
Confidence 6433 2345789999999984 45678999999999999999999999975321 1112222211111
Q ss_pred ccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 559 AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 559 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.. . .........+.+++.+||+.+|++|||+.|+++
T Consensus 248 ~~--~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 248 FG--S------PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp CC--T------TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred cC--c------ccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 00 0 011122345778889999999999999999976
No 211
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=5e-37 Score=328.75 Aligned_cols=187 Identities=25% Similarity=0.371 Sum_probs=160.1
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeC-----CceeEEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSK-----DEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~-----~~~~lv~ 409 (627)
.+.||+|+||.||+|+.. +++.||||++..... ..+.+.+|++++..+ +||||+++++++... ...++||
T Consensus 31 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~~~~lv~ 109 (432)
T 3n9x_A 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRL-KSDYIIRLYDLIIPDDLLKFDELYIVL 109 (432)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCTTTCCCEEEEE
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHc-CCCCcceEEEEEecCCCCcCCeEEEEE
Confidence 478999999999999975 578999999975432 346788999999999 899999999999766 5689999
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||+. |+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 110 e~~~-~~L~~~~~~~-----~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla~~~~ 180 (432)
T 3n9x_A 110 EIAD-SDLKKLFKTP-----IFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180 (432)
T ss_dssp ECCS-EEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC-
T ss_pred ecCC-cCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCccccc
Confidence 9986 5999999753 35899999999999999999999998 9999999999999999999999999998764
Q ss_pred CC--------------------------CCCCCCccccCcccc-CCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 006884 490 FP--------------------------TTATRTIGYRAPEVT-ETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535 (627)
Q Consensus 490 ~~--------------------------~~~~~t~~y~aPE~~-~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~ 535 (627)
.. ....+|+.|+|||++ ....++.++|||||||++|||++|..||.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 181 SEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp ------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 22 344679999999986 56679999999999999999998655543
No 212
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=6e-37 Score=311.70 Aligned_cols=250 Identities=22% Similarity=0.332 Sum_probs=192.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||+|+.+ +++.||||++..... ..+.+.+|++++.++ +||||+++++++...+..++||||++
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~- 85 (299)
T 2r3i_A 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLH- 85 (299)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred hhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHc-CCCCeeeEEEEEecCCceEEEEEccc-
Confidence 468999999999999976 689999999865432 236788999999999 99999999999999999999999997
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 86 ~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 159 (299)
T 2r3i_A 86 QDLKKFMDASA---LTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159 (299)
T ss_dssp EEHHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC
T ss_pred CCHHHHHHhhh---ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccc
Confidence 69999997653 235889999999999999999999998 999999999999999999999999998765432
Q ss_pred -CCCCCCccccCccccCCCC-CCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhh-cccccc-------
Q 006884 492 -TTATRTIGYRAPEVTETRK-ASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVRE-EWTAEV------- 561 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~-~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~------- 561 (627)
....+|+.|+|||++.+.. ++.++||||||+++|||++|+.||..... ......+... ......
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 233 (299)
T 2r3i_A 160 YTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE------IDQLFRIFRTLGTPDEVVWPGVTS 233 (299)
T ss_dssp TTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred cCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccH------HHHHHHHHHHhCCCchhhhhHhhc
Confidence 2345788999999997765 79999999999999999999999975431 1111111111 000000
Q ss_pred ---cchhhhc--CCCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 562 ---FDVELLK--YQDV----EEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 562 ---~d~~l~~--~~~~----~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
+.+.... .... +....++.+++.+|++.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 234 MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp STTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000 0000 012245678888999999999999999987
No 213
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1e-37 Score=323.65 Aligned_cols=244 Identities=20% Similarity=0.314 Sum_probs=190.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccC--HHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAAT--KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|+.. +|+.||||++...... ..++..|..++.+..+||||+++++++...+..++||||+++
T Consensus 56 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~- 134 (340)
T 3an0_A 56 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT- 134 (340)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE-
T ss_pred eeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC-
Confidence 467999999999999964 6899999999765332 345666666644444999999999999999999999999975
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE-GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
+|.+++..... ....+++..+..++.|++.||.|||++ + |+||||||+|||++.++.+||+|||+++.....
T Consensus 135 ~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 210 (340)
T 3an0_A 135 SLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK 210 (340)
T ss_dssp EHHHHHHHHHH-TSCCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHHHH
T ss_pred cHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeCCCceeccccccc
Confidence 99988875321 134699999999999999999999987 7 999999999999999999999999999776432
Q ss_pred CCCCCCccccCccccC----CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006884 492 TTATRTIGYRAPEVTE----TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~----~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
....+|+.|+|||++. ...++.++||||||+++|||++|+.||..... ....+......... ...
T Consensus 211 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~-----~~~~~~~~~~~~~~-~~~----- 279 (340)
T 3an0_A 211 TIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT-----PFQQLKQVVEEPSP-QLP----- 279 (340)
T ss_dssp HHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSC-----HHHHHHHHHHSCCC-CCC-----
T ss_pred ccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccc-----hHHHHHHHhcCCCC-CCC-----
Confidence 1246889999999964 34789999999999999999999999975321 11222222221111 000
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.......+.+++.+||+.+|++|||+.|+++
T Consensus 280 ----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 280 ----ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp ----GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ----cccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 0112345778889999999999999999987
No 214
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=3.9e-37 Score=322.08 Aligned_cols=250 Identities=19% Similarity=0.273 Sum_probs=185.8
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccC------------HHHHHHHHHHHHHhccCCceeceeeEEeeC----
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAAT------------KREFEQQMEVVGTIGKHSNVVPVRAYYYSK---- 402 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------~~~~~~e~~~l~~l~~h~niv~~~~~~~~~---- 402 (627)
.+.||+|+||.||+|...+++.||||++...... .+.+.+|++++..+ +||||+++++++...
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 105 (362)
T 3pg1_A 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF-HHPNILGLRDIFVHFEEPA 105 (362)
T ss_dssp EEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEEEECCTTT
T ss_pred eEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhC-CCcCccceeeeEEeccCCC
Confidence 4789999999999999888999999998653221 26789999999999 899999999998543
Q ss_pred -CceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEee
Q 006884 403 -DEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISD 481 (627)
Q Consensus 403 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~D 481 (627)
...++||||++ |+|.+++... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|
T Consensus 106 ~~~~~lv~e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~D 177 (362)
T 3pg1_A 106 MHKLYLVTELMR-TDLAQVIHDQ----RIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICD 177 (362)
T ss_dssp CCEEEEEEECCS-EEHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC
T ss_pred cceEEEEEccCC-CCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHEEEcCCCCEEEEe
Confidence 35789999997 6888888743 246899999999999999999999998 99999999999999999999999
Q ss_pred cccccccCCC---CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcc
Q 006884 482 VGLAHLINFP---TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEW 557 (627)
Q Consensus 482 fG~a~~~~~~---~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 557 (627)
||+++..... ....+|+.|+|||++.+ ..++.++||||||+++|||++|+.||..... ......+.....
T Consensus 178 fg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~------~~~~~~i~~~~~ 251 (362)
T 3pg1_A 178 FNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTF------YNQLNKIVEVVG 251 (362)
T ss_dssp TTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHHHC
T ss_pred cCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCH------HHHHHHHHHHcC
Confidence 9999765332 23457889999999876 6789999999999999999999999976431 111111111000
Q ss_pred ccc--------------ccchhhhc--CCCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 558 TAE--------------VFDVELLK--YQDV----EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 558 ~~~--------------~~d~~l~~--~~~~----~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
... ........ .... +.....+.+++.+||+.||++|||++|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 252 TPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp CCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 000 00000000 0000 1112457788999999999999999999873
No 215
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=4.1e-37 Score=322.89 Aligned_cols=247 Identities=21% Similarity=0.276 Sum_probs=184.9
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeCC------ceeEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD------EKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~------~~~lv 408 (627)
.+.||+|+||.||+|... +++.||||++..... ..+.+.+|++++..+ +||||+++++++...+ ..++|
T Consensus 30 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~~~~lv 108 (371)
T 2xrw_A 30 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIV 108 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSCCSTTTCCEEEEE
T ss_pred eeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhc-CCCCccceEEeeccccccccccceEEE
Confidence 478999999999999965 688999999875432 245688999999999 9999999999997654 67999
Q ss_pred EecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 409 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
|||+++ +|.+++.. .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 109 ~e~~~~-~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 177 (371)
T 2xrw_A 109 MELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 177 (371)
T ss_dssp EECCSE-EHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC----
T ss_pred EEcCCC-CHHHHHhh-------ccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeeccccc
Confidence 999974 78888752 3889999999999999999999998 999999999999999999999999999876
Q ss_pred CCC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhh-----------
Q 006884 489 NFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVR----------- 554 (627)
Q Consensus 489 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~----------- 554 (627)
... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.+.+.. .....+..
T Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~~~i~~~~~~~~~~~~~ 251 (371)
T 2xrw_A 178 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI------DQWNKVIEQLGTPCPEFMK 251 (371)
T ss_dssp ------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHC-CCCCCHHHHT
T ss_pred ccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHHhCCCCHHHHH
Confidence 433 2346789999999999999999999999999999999999999764311 11111110
Q ss_pred -----------hccccc------ccchhhhcCC--ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 555 -----------EEWTAE------VFDVELLKYQ--DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 555 -----------~~~~~~------~~d~~l~~~~--~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
...... .+........ ........+.+++.+||..||++|||++|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 252 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp TSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 000000 0000000000 011224568889999999999999999999984
No 216
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=5.8e-38 Score=319.67 Aligned_cols=252 Identities=23% Similarity=0.367 Sum_probs=179.0
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|... +++.||||++.... ...+++.+|++++..+ +||||+++++++...+..++||||+++|
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 98 (303)
T 2vwi_A 20 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQC-HHPNIVSYYTSFVVKDELWLVMKLLSGG 98 (303)
T ss_dssp EEECC---CCCEEEEEC----CEEEEECCC----------------CCCCC-CCTTBCCEEEEEESSSCEEEEEECCTTC
T ss_pred hheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhc-CCCCEeeEEEEEeecCCcEEEehhccCC
Confidence 478999999999999954 68999999886442 3356788899999888 8999999999999999999999999999
Q ss_pred cHHHHhhhcC---CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC-
Q 006884 416 SLFMLLHRNR---SDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP- 491 (627)
Q Consensus 416 sL~~~l~~~~---~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~- 491 (627)
+|.+++.... ......+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 99 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 175 (303)
T 2vwi_A 99 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGG 175 (303)
T ss_dssp BHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHHHHHCC---
T ss_pred chHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccchheeccCC
Confidence 9999987421 112346899999999999999999999998 999999999999999999999999998765321
Q ss_pred --------CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006884 492 --------TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 492 --------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
....+|+.|+|||++.+ ..++.++||||||+++|||++|+.||....... .......... ...
T Consensus 176 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~~~~~~~-~~~- 247 (303)
T 2vwi_A 176 DITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK------VLMLTLQNDP-PSL- 247 (303)
T ss_dssp ------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG------HHHHHHTSSC-CCT-
T ss_pred CccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh------HHHHHhccCC-Ccc-
Confidence 22357889999999865 568999999999999999999999997643211 1111111110 000
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
................+.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 248 ETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp TC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0000000000112235677888999999999999999987
No 217
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.7e-37 Score=318.74 Aligned_cols=248 Identities=21% Similarity=0.341 Sum_probs=190.3
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|..++ .||+|++.... ...+.+.+|++++..+ +||||+++++++...+..++|+||++++
T Consensus 38 ~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~iv~e~~~~~ 114 (319)
T 2y4i_B 38 GELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQT-RHENVVLFMGACMSPPHLAIITSLCKGR 114 (319)
T ss_dssp CCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTC-CCTTBCCCCEEEECSSCEEEECBCCCSE
T ss_pred eeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcC-CCCCEeEEEEEEecCCceEEEeecccCC
Confidence 4789999999999999864 49999986432 2235677889999999 9999999999999999999999999999
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC-----
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF----- 490 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~----- 490 (627)
+|.+++... ...+++..+..++.|++.||.|||+++ |+||||||+||+++ ++.+||+|||+++....
T Consensus 115 ~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~ 186 (319)
T 2y4i_B 115 TLYSVVRDA----KIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGR 186 (319)
T ss_dssp EHHHHTTSS----CCCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCCC---------
T ss_pred cHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCccccccccccc
Confidence 999999754 246899999999999999999999998 99999999999998 68999999999876431
Q ss_pred ----CCCCCCCccccCccccCC---------CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcc
Q 006884 491 ----PTTATRTIGYRAPEVTET---------RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEW 557 (627)
Q Consensus 491 ----~~~~~~t~~y~aPE~~~~---------~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 557 (627)
.....+++.|+|||++.+ ..++.++||||||+++|||++|+.||..... .......... .
T Consensus 187 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~-~ 259 (319)
T 2y4i_B 187 REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA------EAIIWQMGTG-M 259 (319)
T ss_dssp -CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCH------HHHHHHHHTT-C
T ss_pred cccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHhccC-C
Confidence 112347889999999864 4578899999999999999999999975321 1112221111 1
Q ss_pred cccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccccc
Q 006884 558 TAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELR 613 (627)
Q Consensus 558 ~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~~ 613 (627)
...... .. ....+.+++.+||+.+|++|||+.++++.|+++.....+
T Consensus 260 ~~~~~~------~~---~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~ 306 (319)
T 2y4i_B 260 KPNLSQ------IG---MGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRR 306 (319)
T ss_dssp CCCCCC------SS---CCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC------
T ss_pred CCCCCc------CC---CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 111100 01 112467788899999999999999999999999876544
No 218
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=3.5e-37 Score=311.94 Aligned_cols=243 Identities=21% Similarity=0.323 Sum_probs=177.9
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccC--HHHHHHHHHH-HHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAAT--KREFEQQMEV-VGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~e~~~-l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||+++.. +++.||+|+++..... ..++..|... +..+ +||||+++++++...+..++||||++
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~iv~~~~~~~~~~~~~lv~e~~~- 89 (290)
T 3fme_A 12 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTV-DCPFTVTFYGALFREGDVWICMELMD- 89 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSSEEEEEECCS-
T ss_pred HHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhC-CCCeEEEEeeeeeccCCEEEEEehhc-
Confidence 478999999999999974 6899999998754322 2333344444 4444 99999999999999999999999997
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE-GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
|+|.+++..... ....+++..+..++.|++.||.|||++ + |+||||||+||+++.++.+||+|||+++.....
T Consensus 90 ~~l~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 165 (290)
T 3fme_A 90 TSLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA 165 (290)
T ss_dssp EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC-----------
T ss_pred cchHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCccccccccc
Confidence 588888764321 134699999999999999999999998 8 999999999999999999999999999876433
Q ss_pred -CCCCCCccccCcccc----CCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhh
Q 006884 492 -TTATRTIGYRAPEVT----ETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVEL 566 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~----~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 566 (627)
....+|+.|+|||++ .+..++.++||||||+++|||++|+.||..... ............... ..
T Consensus 166 ~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~-~~---- 235 (290)
T 3fme_A 166 KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT-----PFQQLKQVVEEPSPQ-LP---- 235 (290)
T ss_dssp ----CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC-----HHHHHHHHHHSCCCC-CC----
T ss_pred ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc-----hHHHHHHHhccCCCC-cc----
Confidence 234588999999996 566789999999999999999999999974321 111222222211111 00
Q ss_pred hcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 567 LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 567 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
. ......+.+++.+||+.+|++|||++|+++
T Consensus 236 --~---~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 236 --A---DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp --T---TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --c---ccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 0 112235678888999999999999999988
No 219
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=8.1e-37 Score=314.36 Aligned_cols=241 Identities=22% Similarity=0.342 Sum_probs=188.5
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---------cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---------ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv 408 (627)
.+.||+|+||.||+|+.. +++.||||++.... .....+.+|++++..+ +||||+++++++...+ .++|
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~-~~lv 92 (322)
T 2ycf_A 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFFDAED-YYIV 92 (322)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHC-CCTTBCCEEEEEESSS-EEEE
T ss_pred eeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhC-CCCCCceEeeEEcCCc-eEEE
Confidence 578999999999999976 57899999986432 1224588999999999 9999999999986554 8999
Q ss_pred EecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC---eEEeecccc
Q 006884 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN---GCISDVGLA 485 (627)
Q Consensus 409 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~---~ki~DfG~a 485 (627)
|||+++|+|.+++... ..+++..+..++.|++.||.|||+++ |+||||||+||+++.++. +||+|||++
T Consensus 93 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 164 (322)
T 2ycf_A 93 LELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHS 164 (322)
T ss_dssp EECCTTEETHHHHSTT-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred EecCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence 9999999999998753 35899999999999999999999998 999999999999987664 999999999
Q ss_pred cccCCCC---CCCCCccccCccccC---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccc
Q 006884 486 HLINFPT---TATRTIGYRAPEVTE---TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTA 559 (627)
Q Consensus 486 ~~~~~~~---~~~~t~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 559 (627)
+...... ...+|+.|+|||++. ...++.++||||||+++|||++|+.||....... .+...+. .....
T Consensus 165 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~----~~~~~ 238 (322)
T 2ycf_A 165 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQIT----SGKYN 238 (322)
T ss_dssp EECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS--CHHHHHH----HTCCC
T ss_pred eecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH--HHHHHHH----hCccc
Confidence 8765432 234789999999973 5678999999999999999999999997543221 2222111 11100
Q ss_pred cccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 560 EVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 560 ~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
..+... ......+.+++.+||+.||++||+++|+++
T Consensus 239 --~~~~~~-----~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 239 --FIPEVW-----AEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp --CCHHHH-----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --cCchhh-----hhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 001100 112245678889999999999999999985
No 220
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=8.8e-37 Score=319.10 Aligned_cols=260 Identities=21% Similarity=0.307 Sum_probs=182.6
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCc-------eeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDE-------KLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~-------~~lv~e 410 (627)
.+.||+|+||.||+|+.. +++.||||++.........+.++++.+..+ +||||+++++++...+. .++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~~~lv~e 106 (360)
T 3e3p_A 28 ERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVL-HHPNIVQLQSYFYTLGERDRRDIYLNVVME 106 (360)
T ss_dssp C----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHH-CCTTBCCEEEEEEEECSSCTTCEEEEEEEE
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhc-CCCCcccHHHhhhccccccccceeEEEEee
Confidence 467999999999999975 689999999876544455667788888888 99999999999976443 789999
Q ss_pred cCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHH--hcCCCCeeecCCCCCCeEecC-CCCeEEeecccccc
Q 006884 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH--SEGGAKFTHGNIKSSNVLLTQ-DLNGCISDVGLAHL 487 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--~~~~~~ivH~Dlkp~NILl~~-~~~~ki~DfG~a~~ 487 (627)
|+++ +|...+.... .....+++..+..++.|++.||.||| +.+ |+||||||+|||++. ++.+||+|||+++.
T Consensus 107 ~~~~-~l~~~~~~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~ 181 (360)
T 3e3p_A 107 YVPD-TLHRCCRNYY-RRQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADGTLKLCDFGSAKK 181 (360)
T ss_dssp CCSC-BHHHHHHHHH-TTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTTEEEECCCTTCBC
T ss_pred cccc-cHHHHHHHHh-hcccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCCcEEEeeCCCcee
Confidence 9986 4544443211 11346899999999999999999999 877 999999999999997 89999999999987
Q ss_pred cCCC---CCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcc------
Q 006884 488 INFP---TTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEW------ 557 (627)
Q Consensus 488 ~~~~---~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~------ 557 (627)
.... ....+|+.|+|||++.+. .++.++||||||+++|||++|+.||...... .....+.....
T Consensus 182 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~------~~~~~~~~~~~~~~~~~ 255 (360)
T 3e3p_A 182 LSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA------GQLHEIVRVLGCPSREV 255 (360)
T ss_dssp CCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHHHCCCCHHH
T ss_pred cCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH------HHHHHHHHHcCCCCHHH
Confidence 6543 234578999999998654 4899999999999999999999999764321 11111111000
Q ss_pred ----cccccchhhhc----------CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhccc
Q 006884 558 ----TAEVFDVELLK----------YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM--IEQIQQP 610 (627)
Q Consensus 558 ----~~~~~d~~l~~----------~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~--L~~~~~~ 610 (627)
.....+..... ..........+.+++.+||+.||.+|||+.|++++ ++++...
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~ 324 (360)
T 3e3p_A 256 LRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHDP 324 (360)
T ss_dssp HHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGCT
T ss_pred HHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCCc
Confidence 00000000000 00011134567889999999999999999999874 5555443
No 221
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=3.8e-37 Score=320.29 Aligned_cols=251 Identities=17% Similarity=0.249 Sum_probs=196.1
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccC------------------HHHHHHHHHHHHHhccCCceeceeeEEe
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAAT------------------KREFEQQMEVVGTIGKHSNVVPVRAYYY 400 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------------~~~~~~e~~~l~~l~~h~niv~~~~~~~ 400 (627)
.+.||+|+||.||+|.. +++.||+|++...... .+.+.+|++++..+ +||||+++++++.
T Consensus 36 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~ 113 (348)
T 2pml_X 36 IRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDI-KNEYCLTCEGIIT 113 (348)
T ss_dssp EEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTC-CCTTBCCCSEEEE
T ss_pred EEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhC-CCCCcceEEEEEe
Confidence 47899999999999999 8999999998654221 17899999999999 8999999999999
Q ss_pred eCCceeEEEecCCCCcHHHH------hhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCeEecC
Q 006884 401 SKDEKLVVYSYMPAGSLFML------LHRNRSDGGTALDWNSRMKIALGTARGIAFIHS-EGGAKFTHGNIKSSNVLLTQ 473 (627)
Q Consensus 401 ~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~Dlkp~NILl~~ 473 (627)
+.+..++||||+++|+|.++ +... ....+++..+..++.|++.||.|||+ .+ |+||||||+||+++.
T Consensus 114 ~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil~~~ 187 (348)
T 2pml_X 114 NYDEVYIIYEYMENDSILKFDEYFFVLDKN---YTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNILMDK 187 (348)
T ss_dssp SSSEEEEEEECCTTCBSSEESSSEESSCSS---SCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEEECT
T ss_pred eCCeEEEEEeccCCCcHHHHHHHhhhhhhc---cccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEEEcC
Confidence 99999999999999999998 4432 13579999999999999999999999 87 999999999999999
Q ss_pred CCCeEEeecccccccCCC--CCCCCCccccCccccCCC-CCCC-cchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHH
Q 006884 474 DLNGCISDVGLAHLINFP--TTATRTIGYRAPEVTETR-KASQ-KSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWV 549 (627)
Q Consensus 474 ~~~~ki~DfG~a~~~~~~--~~~~~t~~y~aPE~~~~~-~~~~-~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~ 549 (627)
++.+||+|||.+...... ....+++.|+|||++.+. .++. ++||||||+++|||++|+.||...... ....
T Consensus 188 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~ 262 (348)
T 2pml_X 188 NGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-----VELF 262 (348)
T ss_dssp TSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-----HHHH
T ss_pred CCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-----HHHH
Confidence 999999999999875432 345688999999999877 5666 999999999999999999999864321 1112
Q ss_pred HHHhhhcccccc----cchhhhc---CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 550 RSVVREEWTAEV----FDVELLK---YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 550 ~~~~~~~~~~~~----~d~~l~~---~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
..+......... +...... ..........+.+++.+||+.+|++|||++|+++
T Consensus 263 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 263 NNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 222111110000 0000000 0000122346778889999999999999999987
No 222
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=5.4e-37 Score=343.89 Aligned_cols=246 Identities=21% Similarity=0.356 Sum_probs=197.4
Q ss_pred hcccCcCCceEEEEEEEcC----CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAILED----GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 412 (627)
.+.||+|+||.||+|.+.. +..||||+++.... ..+.+.+|+.++..+ +||||+++++++. ++..++||||+
T Consensus 395 ~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~-~~~~~lv~E~~ 472 (656)
T 2j0j_A 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKLIGVIT-ENPVWIIMELC 472 (656)
T ss_dssp EEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred eeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEe-cCceEEEEEcC
Confidence 5679999999999999742 45799998865422 346789999999999 9999999999985 55689999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT 492 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~ 492 (627)
++|+|.+++.... ..+++..++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 473 ~~g~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~ 545 (656)
T 2j0j_A 473 TLGELRSFLQVRK----FSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 545 (656)
T ss_dssp TTCBHHHHHHHTT----TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC--
T ss_pred CCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCCeecCCCc
Confidence 9999999998542 35899999999999999999999998 9999999999999999999999999998764432
Q ss_pred -----CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhh
Q 006884 493 -----TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVEL 566 (627)
Q Consensus 493 -----~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 566 (627)
...+|+.|+|||++.+..++.++||||||+++|||++ |..||..... ......+...... .
T Consensus 546 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~------~~~~~~i~~~~~~-~------ 612 (656)
T 2j0j_A 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN------NDVIGRIENGERL-P------ 612 (656)
T ss_dssp --------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHHHHTCCC-C------
T ss_pred ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH------HHHHHHHHcCCCC-C------
Confidence 2235678999999998899999999999999999997 9999975422 1122222111111 0
Q ss_pred hcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006884 567 LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 567 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~ 610 (627)
........+.+++.+||+.+|++|||+.|+++.|+++...
T Consensus 613 ----~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 613 ----MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----CCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 0111224567888999999999999999999999998643
No 223
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.5e-36 Score=318.74 Aligned_cols=253 Identities=22% Similarity=0.319 Sum_probs=191.0
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccC---HHHHHHHHHHHHHhccCCceeceeeEEeeCCce------eEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAAT---KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEK------LVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~------~lv 408 (627)
.+.||+|+||.||+|... +|+.||||++...... .+.+.+|++++..+ +||||+++++++...+.. ++|
T Consensus 47 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~~lv 125 (371)
T 4exu_A 47 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-QHENVIGLLDVFTPASSLRNFYDFYLV 125 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSSTTCCCCEEE
T ss_pred EeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhc-CCCCchhhhhheeccCCcccceeEEEE
Confidence 478999999999999965 6899999999754332 46788999999999 899999999999877654 999
Q ss_pred EecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 409 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
|||+. ++|.+++.. .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 126 ~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 194 (371)
T 4exu_A 126 MPFMQ-TDLQKIMGM-------EFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHA 194 (371)
T ss_dssp EECCC-EEHHHHTTS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTCC---
T ss_pred Ecccc-ccHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCccccc
Confidence 99997 688887742 3899999999999999999999998 999999999999999999999999999876
Q ss_pred CCC-CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccc------cc
Q 006884 489 NFP-TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWT------AE 560 (627)
Q Consensus 489 ~~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~------~~ 560 (627)
... ....+|+.|+|||++.+ ..++.++||||||+++|||++|+.||..... ......+...... ..
T Consensus 195 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~~i~~~~~~~~~~~~~~ 268 (371)
T 4exu_A 195 DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY------LDQLTQILKVTGVPGTEFVQK 268 (371)
T ss_dssp -----CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHHHCCCCHHHHTT
T ss_pred ccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHHHHhCCCcHHHHHH
Confidence 543 34567999999999877 7889999999999999999999999975431 1111111110000 00
Q ss_pred ccc-------hhhh--cCCCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhcc
Q 006884 561 VFD-------VELL--KYQDV----EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM--IEQIQQ 609 (627)
Q Consensus 561 ~~d-------~~l~--~~~~~----~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~--L~~~~~ 609 (627)
..+ .... ..... +.....+.+++.+||+.||++|||++|++++ ++.+..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 332 (371)
T 4exu_A 269 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRD 332 (371)
T ss_dssp CSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTCC
T ss_pred hhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccCCC
Confidence 000 0000 00000 1123467788899999999999999999874 444433
No 224
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2e-37 Score=324.56 Aligned_cols=251 Identities=20% Similarity=0.304 Sum_probs=191.1
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeC-----CceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSK-----DEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~-----~~~~lv~e 410 (627)
.+.||+|+||.||+|+.. +++.||||++..... ..+.+.+|++++..+ +||||+++++++... ...++|+|
T Consensus 32 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~iv~e 110 (364)
T 3qyz_A 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQD 110 (364)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHC-CCTTBCCCCEEECCSSTTTCCCEEEEEE
T ss_pred EEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhc-CCCCCccceeEEecCCccccceEEEEEc
Confidence 478999999999999965 688999999874332 336788999999999 899999999999755 36789999
Q ss_pred cCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC
Q 006884 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF 490 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 490 (627)
|+. |+|.+++... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 111 ~~~-~~L~~~l~~~------~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 180 (364)
T 3qyz_A 111 LME-TDLYKLLKTQ------HLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180 (364)
T ss_dssp CCS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred ccC-cCHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence 997 5999998753 4899999999999999999999998 99999999999999999999999999986542
Q ss_pred C-------CCCCCCccccCccccC-CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccc---c
Q 006884 491 P-------TTATRTIGYRAPEVTE-TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWT---A 559 (627)
Q Consensus 491 ~-------~~~~~t~~y~aPE~~~-~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~---~ 559 (627)
. ....+|+.|+|||++. +..++.++||||||+++|||++|+.||......+ ....+......... .
T Consensus 181 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~ 257 (364)
T 3qyz_A 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD---QLNHILGILGSPSQEDLN 257 (364)
T ss_dssp GGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG---HHHHHHHHHCSCCHHHHH
T ss_pred CCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH---HHHHHHHHhCCCCHHHHH
Confidence 2 2346899999999865 4558999999999999999999999997653222 11111111100000 0
Q ss_pred cccch-------hhhc--CCCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 560 EVFDV-------ELLK--YQDV----EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 560 ~~~d~-------~l~~--~~~~----~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
...+. .... .... +....++.+++.+||+.||++|||++|++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 0000 0000 1112456788999999999999999999873
No 225
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=6.9e-37 Score=320.26 Aligned_cols=248 Identities=22% Similarity=0.299 Sum_probs=175.1
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEeeC------CceeEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSK------DEKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~------~~~~lv 408 (627)
.+.||+|+||.||+|... +|+.||||++..... ..+.+.+|++++..+ +||||+++++++... ...++|
T Consensus 34 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~~lv 112 (367)
T 2fst_X 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLV 112 (367)
T ss_dssp EEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSGGGCCCCEEE
T ss_pred eeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEecCCccccCCeEEEE
Confidence 478999999999999964 689999999865432 346788999999999 899999999998754 557899
Q ss_pred EecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 409 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
+||+ +++|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 113 ~e~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 182 (367)
T 2fst_X 113 THLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHT 182 (367)
T ss_dssp EECC-CEECC-----------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC-------
T ss_pred eccc-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence 9998 7899888864 25899999999999999999999998 999999999999999999999999999876
Q ss_pred CCC-CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhh---c---cccc
Q 006884 489 NFP-TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVRE---E---WTAE 560 (627)
Q Consensus 489 ~~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~---~---~~~~ 560 (627)
... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+.. ..+..+... . ....
T Consensus 183 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~l~~i~~~~g~p~~~~~~~ 256 (367)
T 2fst_X 183 ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI------DQLKLILRLVGTPGAELLKK 256 (367)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHHHCSCCHHHHTT
T ss_pred cccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHHhCCCCHHHHHH
Confidence 443 34568999999999876 67899999999999999999999999764321 111111110 0 0000
Q ss_pred ccch-------hhhc--CCChH----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 561 VFDV-------ELLK--YQDVE----EEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 561 ~~d~-------~l~~--~~~~~----~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
+... .+.. ..... .....+.+++.+||..||++|||++|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 257 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp CCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0000 0000 00000 112356788899999999999999999874
No 226
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=4.5e-37 Score=329.21 Aligned_cols=245 Identities=21% Similarity=0.299 Sum_probs=184.1
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHH
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 418 (627)
.+.||+|+||+||.+...+|+.||||++... ..+.+.+|++++..+.+||||+++++++.+.+..++||||+. |+|.
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~--~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~ 96 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQ 96 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGG--GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHH--HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHH
Confidence 3679999999998777678999999998643 345678899999887789999999999999999999999995 6999
Q ss_pred HHhhhcCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC-------------CCeEEeecc
Q 006884 419 MLLHRNRSDGG--TALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD-------------LNGCISDVG 483 (627)
Q Consensus 419 ~~l~~~~~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~-------------~~~ki~DfG 483 (627)
+++........ ...++..++.++.|++.||.|||+.+ |+||||||+|||++.+ +.+||+|||
T Consensus 97 ~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG 173 (434)
T 2rio_A 97 DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173 (434)
T ss_dssp HHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCT
T ss_pred HHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCceEEEEcccc
Confidence 99986532111 11133456789999999999999998 9999999999999754 489999999
Q ss_pred cccccCCCC--------CCCCCccccCccccCC-------CCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHH
Q 006884 484 LAHLINFPT--------TATRTIGYRAPEVTET-------RKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPR 547 (627)
Q Consensus 484 ~a~~~~~~~--------~~~~t~~y~aPE~~~~-------~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~ 547 (627)
+++...... ...||++|+|||++.+ ..++.++|||||||++|||++ |+.||.......
T Consensus 174 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~------ 247 (434)
T 2rio_A 174 LCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE------ 247 (434)
T ss_dssp TCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH------
T ss_pred cceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH------
Confidence 998764321 2358999999999865 678999999999999999999 999997532110
Q ss_pred HHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 548 WVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 548 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
..+......... ...........++.+++.+||+.||++|||+.|+++
T Consensus 248 --~~i~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 248 --SNIIRGIFSLDE-----MKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp --HHHHHTCCCCCC-----CTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --HHHhcCCCCccc-----ccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 111111111000 011112344567788999999999999999999986
No 227
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=4.7e-37 Score=320.20 Aligned_cols=253 Identities=20% Similarity=0.300 Sum_probs=194.3
Q ss_pred hcccCcCCceEEEEEEEc-CC-cEEEEEEecccccCHHHHHHHHHHHHHhccCCc------eeceeeEEeeCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILE-DG-TTVVVKRLREVAATKREFEQQMEVVGTIGKHSN------VVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~n------iv~~~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|... ++ +.||+|+++......+.+.+|++++..+ +|++ ++.+.+++...+..++|||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~~lv~e 102 (355)
T 2eu9_A 24 VGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKI-KEKDKENKFLCVLMSDWFNFHGHMCIAFE 102 (355)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHH-HHHCTTSCSCBCCEEEEEEETTEEEEEEE
T ss_pred EEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHH-hhcCCCCceeEEEeeeeeeeCCeEEEEEe
Confidence 478999999999999975 34 6899999976555567788899999988 5554 8899999999999999999
Q ss_pred cCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe-------------------
Q 006884 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL------------------- 471 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl------------------- 471 (627)
|+ ++++.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+|||+
T Consensus 103 ~~-~~~l~~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~ 175 (355)
T 2eu9_A 103 LL-GKNTFEFLKENN---FQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSCEEKS 175 (355)
T ss_dssp CC-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred cc-CCChHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecccccccccccccccccc
Confidence 99 667777776542 246899999999999999999999998 9999999999999
Q ss_pred cCCCCeEEeecccccccCCC-CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHH
Q 006884 472 TQDLNGCISDVGLAHLINFP-TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVR 550 (627)
Q Consensus 472 ~~~~~~ki~DfG~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~ 550 (627)
+.++.+||+|||+++..... ....+|+.|+|||++.+..++.++||||||+++|||++|+.||......+ ....+.
T Consensus 176 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~---~~~~~~ 252 (355)
T 2eu9_A 176 VKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE---HLVMME 252 (355)
T ss_dssp ESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHH
T ss_pred cCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHH
Confidence 67889999999999875443 34568999999999999999999999999999999999999998543211 111111
Q ss_pred HHhhh--------cccccccch-h--------------------hhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 006884 551 SVVRE--------EWTAEVFDV-E--------------------LLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVV 601 (627)
Q Consensus 551 ~~~~~--------~~~~~~~d~-~--------------------l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~ 601 (627)
..... ......+.. . .........+...+.+++.+||+.||++|||++|++
T Consensus 253 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l 332 (355)
T 2eu9_A 253 KILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEAL 332 (355)
T ss_dssp HHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred HHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHh
Confidence 11100 000000000 0 000011123345788999999999999999999998
Q ss_pred H
Q 006884 602 R 602 (627)
Q Consensus 602 ~ 602 (627)
+
T Consensus 333 ~ 333 (355)
T 2eu9_A 333 L 333 (355)
T ss_dssp T
T ss_pred c
Confidence 6
No 228
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=3.3e-37 Score=319.15 Aligned_cols=244 Identities=21% Similarity=0.294 Sum_probs=166.9
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEee----CCceeEEEecCCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS----KDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~----~~~~~lv~e~~~~ 414 (627)
+.||+|+||.||+|+.+ +++.||||++... ....+|+..+.+..+||||+++++++.. ....++||||+++
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~g 110 (336)
T 3fhr_A 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEG 110 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTT
T ss_pred eeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCC
Confidence 56999999999999976 6899999998643 2233444444444499999999999876 3457899999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC---CCCeEEeecccccccCCC
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ---DLNGCISDVGLAHLINFP 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~---~~~~ki~DfG~a~~~~~~ 491 (627)
|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++. ++.+||+|||+++.....
T Consensus 111 g~L~~~l~~~~---~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~ 184 (336)
T 3fhr_A 111 GELFSRIQERG---DQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN 184 (336)
T ss_dssp EEHHHHHHTC----CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC---
T ss_pred CCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEeccccceecccc
Confidence 99999998642 246999999999999999999999998 999999999999986 455999999999866432
Q ss_pred --CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 492 --TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
....+|+.|+|||++.+..++.++||||||+++|||++|+.||.......... .......... .... .
T Consensus 185 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~~~~~~~~~~----~~~~---~ 254 (336)
T 3fhr_A 185 ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP---GMKRRIRLGQ----YGFP---N 254 (336)
T ss_dssp -------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------------CCC---T
T ss_pred ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh---hHHHhhhccc----cccC---c
Confidence 34457899999999988889999999999999999999999997643322110 0000000000 0000 0
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.........+.+++.+||+.||++|||++|++++
T Consensus 255 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 255 PEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp TTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0011223456778889999999999999999984
No 229
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=4.4e-36 Score=303.58 Aligned_cols=240 Identities=21% Similarity=0.319 Sum_probs=193.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||+|+.. +++.||+|++.... ...+.+.+|++++.++ +||||+++++++...+..++|+||+++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 105 (287)
T 2wei_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHPNIMKLFEILEDSSSFYIVGELYTG 105 (287)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhc-cCCCccEEEEEEeCCCeEEEEEEccCC
Confidence 478999999999999976 68999999986542 3567899999999999 999999999999999999999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC---CCeEEeecccccccCCC
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD---LNGCISDVGLAHLINFP 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~---~~~ki~DfG~a~~~~~~ 491 (627)
++|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.+ +.+||+|||++......
T Consensus 106 ~~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~ 177 (287)
T 2wei_A 106 GELFDEIIKRK-----RFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (287)
T ss_dssp CBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCcceeecCC
Confidence 99999987642 5899999999999999999999998 9999999999999764 46999999999876543
Q ss_pred C---CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006884 492 T---TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 492 ~---~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
. ...+++.|+|||++.+ .++.++||||||+++|+|++|+.||..... ......+....... + ...
T Consensus 178 ~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~---~--~~~ 245 (287)
T 2wei_A 178 TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE------YDILKRVETGKYAF---D--LPQ 245 (287)
T ss_dssp SSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCCC---C--SGG
T ss_pred CccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH------HHHHHHHHcCCCCC---C--chh
Confidence 2 2236788999999876 489999999999999999999999975421 11222221111110 0 001
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 569 YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
... ....+.+++.+||+.+|++|||+.|+++
T Consensus 246 ~~~---~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 246 WRT---ISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp GTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhh---cCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 111 1235677888999999999999999998
No 230
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=6e-37 Score=324.07 Aligned_cols=260 Identities=20% Similarity=0.315 Sum_probs=189.1
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCc------eeEEEecC
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDE------KLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~------~~lv~e~~ 412 (627)
.+.||+|+||.||+|+...+..||+|++..... ...+|++++..+ +||||+++++++...+. .++||||+
T Consensus 45 ~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~---~~~~E~~il~~l-~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~ 120 (394)
T 4e7w_A 45 CKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR---FKNRELQIMRIV-KHPNVVDLKAFFYSNGDKKDEVFLNLVLEYV 120 (394)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEEECCTT---SCCHHHHHHHTC-CCTTBCCEEEEEEEESSSSSCEEEEEEEECC
T ss_pred eEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc---hHHHHHHHHHhC-CCCCcceEEEEEEecCCCCCceEEEEEeecc
Confidence 478999999999999988777899998864322 224688999999 99999999999975443 78999999
Q ss_pred CCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEec-CCCCeEEeecccccccCCC
Q 006884 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLT-QDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 413 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~-~~~~~ki~DfG~a~~~~~~ 491 (627)
+++.+......... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++ .++.+||+|||+++.....
T Consensus 121 ~~~l~~~~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~ 195 (394)
T 4e7w_A 121 PETVYRASRHYAKL--KQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG 195 (394)
T ss_dssp SEEHHHHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred CccHHHHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCC
Confidence 87544433322211 246899999999999999999999998 99999999999999 7999999999999876332
Q ss_pred ---CCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcc-------ccc
Q 006884 492 ---TTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEW-------TAE 560 (627)
Q Consensus 492 ---~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 560 (627)
....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+....+ .+...+. ...... ...
T Consensus 196 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~--~l~~i~~-~~g~p~~~~~~~~~~~ 272 (394)
T 4e7w_A 196 EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID--QLVEIIK-VLGTPSREQIKTMNPN 272 (394)
T ss_dssp CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHH-HHCCCCHHHHHHHCGG
T ss_pred CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHH-HhCCCCHHHHHhhChh
Confidence 345678999999998764 58999999999999999999999998643211 1111111 000000 000
Q ss_pred ccchhhhc--CCCh-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhccc
Q 006884 561 VFDVELLK--YQDV-----EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM--IEQIQQP 610 (627)
Q Consensus 561 ~~d~~l~~--~~~~-----~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~--L~~~~~~ 610 (627)
.....+.. .... .....++.+++.+||+.||++|||+.|++++ ++++...
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~ 331 (394)
T 4e7w_A 273 YMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTG 331 (394)
T ss_dssp GSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTSS
T ss_pred hhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhccc
Confidence 00000000 0000 0122467788899999999999999999874 5555443
No 231
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=3.2e-36 Score=308.59 Aligned_cols=241 Identities=19% Similarity=0.287 Sum_probs=189.1
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEeccccc---CHHHHHHHHHHHHHhcc-CCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAA---TKREFEQQMEVVGTIGK-HSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~~-h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||++...+++.||||++..... ..+.+.+|++++..+.. |+||+++++++...+..++||| +.+
T Consensus 33 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~ 111 (313)
T 3cek_A 33 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 111 (313)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCS
T ss_pred EEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCC
Confidence 478999999999999988899999999865432 34678899999999954 7999999999999999999999 568
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++ ++.+||+|||+++.....
T Consensus 112 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~~ 182 (313)
T 3cek_A 112 IDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 182 (313)
T ss_dssp EEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCC-------
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEE-CCeEEEeeccccccccCcccc
Confidence 8999999864 35899999999999999999999998 99999999999996 489999999999876432
Q ss_pred ---CCCCCCccccCccccCC-----------CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcc
Q 006884 492 ---TTATRTIGYRAPEVTET-----------RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEW 557 (627)
Q Consensus 492 ---~~~~~t~~y~aPE~~~~-----------~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 557 (627)
....+++.|+|||++.+ ..++.++||||||+++|||++|+.||..... .............
T Consensus 183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~~~~~~~~~~~~ 257 (313)
T 3cek_A 183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLHAIIDPNH 257 (313)
T ss_dssp -------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHHHHHCTTS
T ss_pred ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH-----HHHHHHHHHhccc
Confidence 23357899999999865 4688899999999999999999999975321 1112222221111
Q ss_pred cccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006884 558 TAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMI 604 (627)
Q Consensus 558 ~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L 604 (627)
.... .... ...+.+++.+||+.+|++||++.|++++-
T Consensus 258 ~~~~-------~~~~---~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 258 EIEF-------PDIP---EKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp CCCC-------CCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred ccCC-------cccc---hHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 1000 0111 23567788899999999999999999853
No 232
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=3.3e-36 Score=306.48 Aligned_cols=241 Identities=22% Similarity=0.371 Sum_probs=186.0
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEee-------------CCc
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS-------------KDE 404 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~-------------~~~ 404 (627)
.+.||+|+||.||+|+.. +++.||||++.......+.+.+|++++..+ +||||+++++++.+ ...
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (303)
T 1zy4_A 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL-NHQYVVRYYAAWLERRNFVKPMTAVKKKST 89 (303)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEECCCCCC------CEEE
T ss_pred hheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHhhcchhhhhcccccCCc
Confidence 478999999999999975 789999999976555567889999999999 89999999998865 345
Q ss_pred eeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccc
Q 006884 405 KLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGL 484 (627)
Q Consensus 405 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~ 484 (627)
.++||||+++|+|.+++... ...+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~ 162 (303)
T 1zy4_A 90 LFIQMEYCENGTLYDLIHSE----NLNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGL 162 (303)
T ss_dssp EEEEEECCCSCBHHHHHHHS----CGGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred eEEEEecCCCCCHHHhhhcc----ccccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEEEeeCcc
Confidence 78999999999999999854 235788999999999999999999998 99999999999999999999999999
Q ss_pred ccccCCC------------------CCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCH
Q 006884 485 AHLINFP------------------TTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545 (627)
Q Consensus 485 a~~~~~~------------------~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~ 545 (627)
++..... ....+++.|+|||++.+. .++.++||||||+++|||++ ||.... ..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~-----~~ 234 (303)
T 1zy4_A 163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM-----ER 234 (303)
T ss_dssp CSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH-----HH
T ss_pred hhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch-----hH
Confidence 9765321 223478899999998764 68999999999999999998 553210 11
Q ss_pred HHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 546 PRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 546 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
......+.... ..+.+. ........+.+++.+||+.||.+|||++|++++
T Consensus 235 ~~~~~~~~~~~---~~~~~~-----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 235 VNILKKLRSVS---IEFPPD-----FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHHHHHSTT---CCCCTT-----CCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHhccccc---cccCcc-----ccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 11111111100 000111 111223456778889999999999999999873
No 233
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=3.1e-36 Score=307.38 Aligned_cols=239 Identities=20% Similarity=0.328 Sum_probs=189.2
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc-----cCHHHHHHHHHHHHHhccCCceeceeeEEe--eCCceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-----ATKREFEQQMEVVGTIGKHSNVVPVRAYYY--SKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~--~~~~~~lv~e 410 (627)
.+.||+|+||.||++... +++.||+|++.... ...+.+.+|++++..+ +||||+++++++. +....++|||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e 88 (305)
T 2wtk_C 10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-RHKNVIQLVDVLYNEEKQKMYMVME 88 (305)
T ss_dssp CCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEECC---CEEEEEE
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhc-CCCCeeEEEEEEEcCCCCeEEEEeh
Confidence 468999999999999975 68899999986542 2356789999999999 8999999999984 4457899999
Q ss_pred cCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC
Q 006884 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF 490 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 490 (627)
|++++ |.+++.... ...+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||++.....
T Consensus 89 ~~~~~-l~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~ 161 (305)
T 2wtk_C 89 YCVCG-MQEMLDSVP---EKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHP 161 (305)
T ss_dssp CCSEE-HHHHHHHST---TCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred hccCC-HHHHHHhCc---ccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeeccccccccCc
Confidence 99876 777776543 346899999999999999999999998 99999999999999999999999999987642
Q ss_pred C------CCCCCCccccCccccCCCCC--CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006884 491 P------TTATRTIGYRAPEVTETRKA--SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 491 ~------~~~~~t~~y~aPE~~~~~~~--~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
. ....+++.|+|||++.+... +.++||||||+++|||++|+.||.... .......+...... +
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~i~~~~~~---~ 232 (305)
T 2wtk_C 162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN------IYKLFENIGKGSYA---I 232 (305)
T ss_dssp TCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHCCCC---C
T ss_pred cccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch------HHHHHHHHhcCCCC---C
Confidence 2 23457899999999876443 789999999999999999999997532 22222222111100 0
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
. ......+.+++.+||+.||++|||++|++++
T Consensus 233 ------~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 233 ------P---GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ------C---SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ------C---CccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 1122356678889999999999999999974
No 234
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7.1e-37 Score=322.59 Aligned_cols=257 Identities=21% Similarity=0.338 Sum_probs=187.3
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCC--------------
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD-------------- 403 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~-------------- 403 (627)
.+.||+|+||.||+|+.. +|+.||||++.... ....+|+++++.+ +||||+++++++....
T Consensus 12 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~ 87 (383)
T 3eb0_A 12 GKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP---RYKNRELDIMKVL-DHVNIIKLVDYFYTTGDEEPKPPQPPDDHN 87 (383)
T ss_dssp EEEEECC-CEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHTTC-CCTTBCCEEEEEEEC---------------
T ss_pred EEEEEeccCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHHc-CCCCccchhheeeecCcccccccccccccc
Confidence 478999999999999964 78999999986432 2234688999999 9999999999985432
Q ss_pred ------------------------ceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 006884 404 ------------------------EKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKF 459 (627)
Q Consensus 404 ------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~i 459 (627)
..++||||++ |+|.+.+..... ....+++..+..++.|++.||.|||+.+ |
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g---i 162 (383)
T 3eb0_A 88 KLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIR-SGRSIPMNLISIYIYQLFRAVGFIHSLG---I 162 (383)
T ss_dssp ----------------------CCEEEEEECCCS-EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHTTT---E
T ss_pred cccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCc---C
Confidence 3789999998 588877764211 1346899999999999999999999998 9
Q ss_pred eecCCCCCCeEec-CCCCeEEeecccccccCCC---CCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCC
Q 006884 460 THGNIKSSNVLLT-QDLNGCISDVGLAHLINFP---TTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPL 534 (627)
Q Consensus 460 vH~Dlkp~NILl~-~~~~~ki~DfG~a~~~~~~---~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~pf 534 (627)
+||||||+|||++ .++.+||+|||+++..... ....+|+.|+|||++.+. .++.++||||+||++|||++|+.||
T Consensus 163 ~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf 242 (383)
T 3eb0_A 163 CHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLF 242 (383)
T ss_dssp ECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred ccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCC
Confidence 9999999999998 6889999999999876432 344578899999998764 5899999999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHhhhccccccc--ch-----hhh--cCCCh-----HHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 006884 535 QHSGHDDVVDLPRWVRSVVREEWTAEVF--DV-----ELL--KYQDV-----EEEMVQMLQIALSCVAKVPDSRPKMDDV 600 (627)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d~-----~l~--~~~~~-----~~~~~~l~~l~~~Cl~~~P~~RPs~~ev 600 (627)
.+....+ .+...+. .........+. ++ ... ..... ......+.+++.+||+.+|++|||+.|+
T Consensus 243 ~~~~~~~--~~~~i~~-~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~ 319 (383)
T 3eb0_A 243 SGETSID--QLVRIIQ-IMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEA 319 (383)
T ss_dssp CCSSHHH--HHHHHHH-HHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred CCCChHH--HHHHHHH-HhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHH
Confidence 8643211 1111110 00000000000 00 000 00000 0122357788899999999999999999
Q ss_pred HH--HHHhh
Q 006884 601 VR--MIEQI 607 (627)
Q Consensus 601 ~~--~L~~~ 607 (627)
++ .++++
T Consensus 320 l~hp~f~~~ 328 (383)
T 3eb0_A 320 MAHPFFDHL 328 (383)
T ss_dssp HTSGGGHHH
T ss_pred hcCHHHHHH
Confidence 86 34444
No 235
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=6.4e-37 Score=315.54 Aligned_cols=251 Identities=23% Similarity=0.341 Sum_probs=191.3
Q ss_pred hcccCcCCceEEEEEEE--cCCcEEEEEEeccccc---CHHHHHHHHHHHHHhc--cCCceeceeeEEe-----eCCcee
Q 006884 339 AEVLGKGSYGSTYKAIL--EDGTTVVVKRLREVAA---TKREFEQQMEVVGTIG--KHSNVVPVRAYYY-----SKDEKL 406 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~---~~~~~~~e~~~l~~l~--~h~niv~~~~~~~-----~~~~~~ 406 (627)
.+.||+|+||.||+|+. .+++.||+|++..... ....+.+|++++..+. +||||+++++++. .....+
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~ 95 (326)
T 1blx_A 16 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 95 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEE
T ss_pred eeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEE
Confidence 47899999999999997 3678999999865432 2235667777777664 7999999999987 455688
Q ss_pred EEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccc
Q 006884 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH 486 (627)
Q Consensus 407 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 486 (627)
+||||++ |+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 96 lv~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~Dfg~~~ 168 (326)
T 1blx_A 96 LVFEHVD-QDLTTYLDKVP---EPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLAR 168 (326)
T ss_dssp EEEECCS-CBHHHHHHHSC---TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred EEEecCC-CCHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEecCcccc
Confidence 9999997 69999998653 235899999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhh-------hc
Q 006884 487 LINFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVR-------EE 556 (627)
Q Consensus 487 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~-------~~ 556 (627)
..... ....+|+.|+|||++.+..++.++||||||+++|||++|+.||..... ......+.. ..
T Consensus 169 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~i~~~~~~~~~~~ 242 (326)
T 1blx_A 169 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD------VDQLGKILDVIGLPGEED 242 (326)
T ss_dssp CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHHHCCCCGGG
T ss_pred cccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH------HHHHHHHHHHcCCCCccc
Confidence 76432 334578999999999999999999999999999999999999975432 111111111 00
Q ss_pred ccccccch--hhhc------CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 557 WTAEVFDV--ELLK------YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 557 ~~~~~~d~--~l~~------~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
+......+ .... ..........+.+++.+||+.+|++|||+.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 243 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp SCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 10000000 0000 0000112245667888999999999999999986
No 236
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=8.1e-37 Score=325.75 Aligned_cols=259 Identities=22% Similarity=0.332 Sum_probs=187.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCC------ceeEEEec
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD------EKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~------~~~lv~e~ 411 (627)
.+.||+|+||.||+|++. +++.||||++.... +.+.+|++++..+ +||||+++++++.... ..++||||
T Consensus 59 ~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~E~~il~~l-~hpniv~l~~~~~~~~~~~~~~~~~lv~e~ 134 (420)
T 1j1b_A 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---RFKNRELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDY 134 (420)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHHTC-CCTTBCCEEEEEEEEETTTTEEEEEEEEEC
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEecccc---hhHHHHHHHHHHc-CCCCccceeeEEeccCCCCcceeEEeehhc
Confidence 478999999999999976 58999999986432 2234689999999 9999999999986421 25689999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC-CCeEEeecccccccCC
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD-LNGCISDVGLAHLINF 490 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~-~~~ki~DfG~a~~~~~ 490 (627)
+++ ++.+.+..... ....+++..+..++.|++.||.|||+++ |+||||||+|||++.+ +.+||+|||+++....
T Consensus 135 ~~~-~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~ 209 (420)
T 1j1b_A 135 VPE-TVYRVARHYSR-AKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209 (420)
T ss_dssp CCE-EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred ccc-cHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhhhhccc
Confidence 976 66666543211 1346899999999999999999999998 9999999999999965 5689999999987543
Q ss_pred C---CCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHH-------hhh--cc
Q 006884 491 P---TTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSV-------VRE--EW 557 (627)
Q Consensus 491 ~---~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~-------~~~--~~ 557 (627)
. ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+.... ..+...+... +.. ..
T Consensus 210 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~--~~l~~i~~~lg~p~~~~~~~~~~~ 287 (420)
T 1j1b_A 210 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV--DQLVEIIKVLGTPTREQIREMNPN 287 (420)
T ss_dssp TCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHCSCCHHHHHHHCSC
T ss_pred CCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCCHHHHHhhChh
Confidence 2 345679999999998764 7899999999999999999999999864311 1111111100 000 00
Q ss_pred cccccchhhhcCCCh-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHhhcc
Q 006884 558 TAEVFDVELLKYQDV-----EEEMVQMLQIALSCVAKVPDSRPKMDDVVR--MIEQIQQ 609 (627)
Q Consensus 558 ~~~~~d~~l~~~~~~-----~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~--~L~~~~~ 609 (627)
..+...+.. ..... .....++.+++.+||..||++|||+.|+++ .++++..
T Consensus 288 ~~~~~~p~~-~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 345 (420)
T 1j1b_A 288 YTEFKFPQI-KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 345 (420)
T ss_dssp CCCCCCCCC-CCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGC
T ss_pred hhhhccCcc-CCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccccc
Confidence 000000000 00000 111246778889999999999999999987 3444443
No 237
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=7.6e-37 Score=315.27 Aligned_cols=249 Identities=22% Similarity=0.309 Sum_probs=172.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|..+ +++.||||++..... ...++..|+..+.+..+||||+++++++...+..++||||+++
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~- 105 (327)
T 3aln_A 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST- 105 (327)
T ss_dssp -CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-
T ss_pred hheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-
Confidence 478999999999999975 689999999975432 2345666666444444999999999999999999999999975
Q ss_pred cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006884 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE-GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 416 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
+|.+++..........+++..+..++.|++.||.|||+. + |+||||||+||+++.++.+||+|||+++.....
T Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 182 (327)
T 3aln_A 106 SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK 182 (327)
T ss_dssp EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC-------
T ss_pred ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceeccccccc
Confidence 888877643222235689999999999999999999998 8 999999999999999999999999999876433
Q ss_pred CCCCCCccccCcccc----CCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006884 492 TTATRTIGYRAPEVT----ETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~----~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
....+|+.|+|||++ .+..++.++||||||+++|||++|+.||........ ....... ..... +.
T Consensus 183 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-----~~~~~~~-~~~~~-----~~ 251 (327)
T 3aln_A 183 TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD-----QLTQVVK-GDPPQ-----LS 251 (327)
T ss_dssp -----------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------CCCCC-SCCCC-----CC
T ss_pred ccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH-----HHHHHhc-CCCCC-----CC
Confidence 223578899999998 456789999999999999999999999975321100 0000000 00000 00
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
..........+.+++.+||+.+|++|||+.|++++
T Consensus 252 -~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 252 -NSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp -CCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred -CcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 00001122356788889999999999999999873
No 238
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=7.9e-37 Score=318.67 Aligned_cols=254 Identities=22% Similarity=0.326 Sum_probs=190.9
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccC---HHHHHHHHHHHHHhccCCceeceeeEEeeCCc------eeEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAAT---KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDE------KLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~------~~lv 408 (627)
.+.||+|+||.||+|+.+ +|+.||||++...... .+.+.+|+.++..+ +||||+++++++..... .++|
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~lv 107 (353)
T 3coi_A 29 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-QHENVIGLLDVFTPASSLRNFYDFYLV 107 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSGGGCCCCEEE
T ss_pred eeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhc-CCCCcccHhheEecccccccceeEEEE
Confidence 467999999999999975 6899999998754332 45788999999999 89999999999987654 4899
Q ss_pred EecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 409 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
|||+. |+|.+++.. .+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++..
T Consensus 108 ~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 176 (353)
T 3coi_A 108 MPFMQ-TDLQKIMGL-------KFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHA 176 (353)
T ss_dssp EECCS-EEGGGTTTS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred ecccc-CCHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeecccccCC
Confidence 99997 588777642 3899999999999999999999998 999999999999999999999999999876
Q ss_pred CCC-CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhc------cccc
Q 006884 489 NFP-TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREE------WTAE 560 (627)
Q Consensus 489 ~~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~------~~~~ 560 (627)
... ....+|+.|+|||++.+ ..++.++||||||+++|||++|+.||..... ......+.... ....
T Consensus 177 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~~~~~~i~~~~~~~~~~~~~~ 250 (353)
T 3coi_A 177 DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY------LDQLTQILKVTGVPGTEFVQK 250 (353)
T ss_dssp -------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCH------HHHHHHHHHHHCBCCHHHHTT
T ss_pred CCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHHHhCCCCHHHHHH
Confidence 443 33467899999999876 6789999999999999999999999976432 11111111100 0000
Q ss_pred ccch-------hhh-----c-CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhccc
Q 006884 561 VFDV-------ELL-----K-YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM--IEQIQQP 610 (627)
Q Consensus 561 ~~d~-------~l~-----~-~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~--L~~~~~~ 610 (627)
..+. .+. . ....+.....+.+++.+||+.||++|||++|++++ ++.+...
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~~ 315 (353)
T 3coi_A 251 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDP 315 (353)
T ss_dssp CSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTCCG
T ss_pred HhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhccCc
Confidence 0000 000 0 00011223467788889999999999999999873 4444433
No 239
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=3.6e-36 Score=313.58 Aligned_cols=256 Identities=19% Similarity=0.289 Sum_probs=191.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCceeceeeEEeeC-----CceeEEEe
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSK-----DEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~-----~~~~lv~e 410 (627)
.+.||+|+||.||+|+.. +|+.||||++..... ....+.+|++++..+ +||||+++++++... ...++|+|
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~lv~e 94 (353)
T 2b9h_A 16 KSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF-KHENIITIFNIQRPDSFENFNEVYIIQE 94 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCSTTCCCEEEEEC
T ss_pred eeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhC-cCCCcCCeeeeecccccCccceEEEEEe
Confidence 478999999999999976 688999999864322 345678999999999 899999999988754 57899999
Q ss_pred cCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC
Q 006884 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF 490 (627)
Q Consensus 411 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 490 (627)
|+. |+|.+++... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 95 ~~~-~~L~~~~~~~------~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (353)
T 2b9h_A 95 LMQ-TDLHRVISTQ------MLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164 (353)
T ss_dssp CCS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred ccC-ccHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEeccccccccc
Confidence 997 6999998752 5899999999999999999999998 99999999999999999999999999987642
Q ss_pred C--------------CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhh
Q 006884 491 P--------------TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVRE 555 (627)
Q Consensus 491 ~--------------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 555 (627)
. ....+|+.|+|||++.+ ..++.++||||||+++|||++|+.||......+ ....+......
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~ 241 (353)
T 2b9h_A 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH---QLLLIFGIIGT 241 (353)
T ss_dssp ---------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCC
T ss_pred ccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH---HHHHHHHHhCC
Confidence 1 12357889999998754 778999999999999999999999997643110 00000000000
Q ss_pred cc----cccccch-------hhhcC--CCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHhhc
Q 006884 556 EW----TAEVFDV-------ELLKY--QDV----EEEMVQMLQIALSCVAKVPDSRPKMDDVVR--MIEQIQ 608 (627)
Q Consensus 556 ~~----~~~~~d~-------~l~~~--~~~----~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~--~L~~~~ 608 (627)
.. ....... .+... ... +.....+.+++.+||+.||++|||++|+++ .++.+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 313 (353)
T 2b9h_A 242 PHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH 313 (353)
T ss_dssp CCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred CchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccC
Confidence 00 0000000 00000 000 112245678889999999999999999987 344443
No 240
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1e-36 Score=313.35 Aligned_cols=233 Identities=21% Similarity=0.370 Sum_probs=190.6
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc-------CHHHHHHHHHHHHHhc-cCCceeceeeEEeeCCceeEEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA-------TKREFEQQMEVVGTIG-KHSNVVPVRAYYYSKDEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~e~~~l~~l~-~h~niv~~~~~~~~~~~~~lv~ 409 (627)
.+.||+|+||.||+|+.. +++.||||++..... ..+.+.+|++++..+. .|+||+++++++...+..++|+
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~ 127 (320)
T 3a99_A 48 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLIL 127 (320)
T ss_dssp EEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEE
Confidence 478999999999999964 688999999875432 2245778999999995 3799999999999999999999
Q ss_pred ecCCC-CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEec-CCCCeEEeecccccc
Q 006884 410 SYMPA-GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLT-QDLNGCISDVGLAHL 487 (627)
Q Consensus 410 e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~-~~~~~ki~DfG~a~~ 487 (627)
|++.+ ++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++ +++.+||+|||+++.
T Consensus 128 e~~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~ 199 (320)
T 3a99_A 128 ERPEPVQDLFDFITER-----GALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 199 (320)
T ss_dssp ECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EcCCCCccHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEEEeeCccccc
Confidence 99976 8999999864 35899999999999999999999998 99999999999999 789999999999987
Q ss_pred cCCC--CCCCCCccccCccccCCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006884 488 INFP--TTATRTIGYRAPEVTETRKA-SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 488 ~~~~--~~~~~t~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
.... ....+|+.|+|||++.+..+ +.++||||||+++|||++|+.||.... ....... .+
T Consensus 200 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------------~~~~~~~---~~-- 262 (320)
T 3a99_A 200 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------------EIIRGQV---FF-- 262 (320)
T ss_dssp CCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------HHHHCCC---CC--
T ss_pred cccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------------hhhcccc---cc--
Confidence 6543 23458899999999877665 688999999999999999999996421 0111100 00
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.... ..++.+++.+||+.+|++|||++|++++
T Consensus 263 ----~~~~---~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 263 ----RQRV---SSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp ----SSCC---CHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ----cccC---CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0111 2356678889999999999999999873
No 241
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=4.8e-36 Score=307.79 Aligned_cols=241 Identities=19% Similarity=0.301 Sum_probs=171.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccC--HHHHHHHH-HHHHHhccCCceeceeeEEeeCCceeEEEecCCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAAT--KREFEQQM-EVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~e~-~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||+|+.+ +++.||||++...... ..++..|. .++..+ +||||+++++++...+..++||||+ +
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~-~ 107 (318)
T 2dyl_A 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSH-DCPYIVQCFGTFITNTDVFIAMELM-G 107 (318)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTT-TCTTBCCEEEEEECSSEEEEEECCC-S
T ss_pred cceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhc-CCCceeeEEEEEecCCcEEEEEecc-C
Confidence 478999999999999976 6899999998754322 22333344 445555 9999999999999999999999999 5
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE-GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+.+..+.... ...+++..+..++.|++.||.|||+. + |+||||||+||+++.++.+||+|||++......
T Consensus 108 ~~~~~l~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (318)
T 2dyl_A 108 TCAEKLKKRM----QGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA 180 (318)
T ss_dssp EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred CcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc
Confidence 5665555432 23589999999999999999999995 7 999999999999999999999999999765432
Q ss_pred -CCCCCCccccCccccC-----CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchh
Q 006884 492 -TTATRTIGYRAPEVTE-----TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVE 565 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 565 (627)
....+++.|+|||++. ...++.++||||||+++|||++|+.||..... ...............
T Consensus 181 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~~------ 249 (318)
T 2dyl_A 181 KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT-----DFEVLTKVLQEEPPL------ 249 (318)
T ss_dssp ------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHHHHHHSCCCC------
T ss_pred ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc-----cHHHHHHHhccCCCC------
Confidence 2345789999999984 55788999999999999999999999975321 122222222221110
Q ss_pred hhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 566 LLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 566 l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
...... ....+.+++.+||+.||.+||+++|+++
T Consensus 250 ~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 250 LPGHMG---FSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp CCSSSC---CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCccCC---CCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 000111 1235667888999999999999999987
No 242
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.8e-36 Score=307.85 Aligned_cols=248 Identities=19% Similarity=0.275 Sum_probs=182.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEe--------------eC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYY--------------SK 402 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~--------------~~ 402 (627)
.+.||+|+||.||+|... +++.||+|++.... ...+.+.+|++++..+ +||||+++++++. ..
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~~~~~ 94 (320)
T 2i6l_A 16 LKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRL-DHDNIVKVFEILGPSGSQLTDDVGSLTEL 94 (320)
T ss_dssp EEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECTTSCBCCC----CCSC
T ss_pred EEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhc-CCCCeeEEEEecccccccccccccccccc
Confidence 478999999999999976 48999999986543 2346788999999999 9999999999874 34
Q ss_pred CceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEec-CCCCeEEee
Q 006884 403 DEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLT-QDLNGCISD 481 (627)
Q Consensus 403 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~-~~~~~ki~D 481 (627)
...++||||++ |+|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+||+++ +++.+||+|
T Consensus 95 ~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~D 164 (320)
T 2i6l_A 95 NSVYIVQEYME-TDLANVLEQ------GPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGD 164 (320)
T ss_dssp SEEEEEEECCS-EEHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTEEEECC
T ss_pred CceeEEeeccC-CCHHHHhhc------CCccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCeEEEcc
Confidence 56789999997 699999864 35889999999999999999999998 99999999999997 567999999
Q ss_pred cccccccCCC-------CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHh
Q 006884 482 VGLAHLINFP-------TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVV 553 (627)
Q Consensus 482 fG~a~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 553 (627)
||+++..... ....++..|+|||++.+ ..++.++||||||+++|||++|+.||..... ......+.
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~~~~~~~~ 238 (320)
T 2i6l_A 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE------LEQMQLIL 238 (320)
T ss_dssp CTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHH
T ss_pred CccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCH------HHHHHHHH
Confidence 9999876422 22345788999998765 6789999999999999999999999986432 11111111
Q ss_pred hhccc-------------ccccchhhhcCC-Ch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 554 REEWT-------------AEVFDVELLKYQ-DV----EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 554 ~~~~~-------------~~~~d~~l~~~~-~~----~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
..... ............ .. +....++.+++.+||+.||++|||++|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 239 ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 11000 000000000000 00 1123457788899999999999999999873
No 243
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.2e-36 Score=321.73 Aligned_cols=239 Identities=20% Similarity=0.302 Sum_probs=180.1
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHH
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 418 (627)
.+.||+|+||+||.....+++.||||++..... ..+.+|++++..+.+||||+++++++.+....++||||+. |+|.
T Consensus 29 ~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~--~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~ 105 (432)
T 3p23_A 29 KDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF--SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQ 105 (432)
T ss_dssp EEEEEECGGGCEEEEEESSSSEEEEEEECTTTE--EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEHH
T ss_pred CCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH--HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCHH
Confidence 468999999997665566799999999864322 2356788999998789999999999999999999999996 6999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC-----CCCeEEeecccccccCCC--
Q 006884 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ-----DLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~-----~~~~ki~DfG~a~~~~~~-- 491 (627)
+++..... ...+..+..++.|++.||.|||+.+ |+||||||+|||++. ...+||+|||+++.....
T Consensus 106 ~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~ 178 (432)
T 3p23_A 106 EYVEQKDF----AHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178 (432)
T ss_dssp HHHHSSSC----CCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred HHHHhcCC----CccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence 99986532 2444456789999999999999998 999999999999953 346789999999876432
Q ss_pred -----CCCCCCccccCccccC---CCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006884 492 -----TTATRTIGYRAPEVTE---TRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 492 -----~~~~~t~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
....||++|+|||++. ...++.++|||||||++|||++ |..||...... ...... ........
T Consensus 179 ~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~-------~~~~~~-~~~~~~~~ 250 (432)
T 3p23_A 179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR-------QANILL-GACSLDCL 250 (432)
T ss_dssp -------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH-------HHHHHT-TCCCCTTS
T ss_pred ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH-------HHHHHh-ccCCcccc
Confidence 2345899999999997 4567889999999999999999 99998643211 111111 11111110
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
.........+.+++.+||+.||++|||++|+++
T Consensus 251 -------~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 251 -------HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp -------CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -------CccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 011123344678889999999999999999984
No 244
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.4e-36 Score=308.21 Aligned_cols=233 Identities=21% Similarity=0.365 Sum_probs=184.7
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEeccccc-------CHHHHHHHHHHHHHhc---cCCceeceeeEEeeCCceeE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA-------TKREFEQQMEVVGTIG---KHSNVVPVRAYYYSKDEKLV 407 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~e~~~l~~l~---~h~niv~~~~~~~~~~~~~l 407 (627)
.+.||+|+||.||+|+.. +++.||||++..... ....+.+|++++.++. +|+||+++++++...+..++
T Consensus 36 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~ 115 (312)
T 2iwi_A 36 GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFML 115 (312)
T ss_dssp EEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEE
T ss_pred eeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEE
Confidence 478999999999999864 688999999865432 2234567888888885 79999999999999999999
Q ss_pred EEec-CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEec-CCCCeEEeecccc
Q 006884 408 VYSY-MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLT-QDLNGCISDVGLA 485 (627)
Q Consensus 408 v~e~-~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~-~~~~~ki~DfG~a 485 (627)
|+|| +.+++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++ .++.+||+|||++
T Consensus 116 v~e~~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~dfg~~ 187 (312)
T 2iwi_A 116 VLERPLPAQDLFDYITEK-----GPLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSG 187 (312)
T ss_dssp EEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTTEEEECCCSSC
T ss_pred EEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCCeEEEEEcchh
Confidence 9999 7899999999864 25899999999999999999999998 99999999999999 8899999999999
Q ss_pred cccCCC--CCCCCCccccCccccCCCCCC-CcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006884 486 HLINFP--TTATRTIGYRAPEVTETRKAS-QKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 486 ~~~~~~--~~~~~t~~y~aPE~~~~~~~~-~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
+..... ....++..|+|||++.+..+. .++||||||+++|||++|+.||.... ....... .+
T Consensus 188 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------------~~~~~~~---~~ 252 (312)
T 2iwi_A 188 ALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------------EILEAEL---HF 252 (312)
T ss_dssp EECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------HHHHTCC---CC
T ss_pred hhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------------HHhhhcc---CC
Confidence 876543 334578999999998776664 58999999999999999999996421 0111100 00
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
.. .....+.+++.+||+.+|++|||++|++++
T Consensus 253 ------~~---~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 253 ------PA---HVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp ------CT---TSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ------cc---cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01 112356778889999999999999999874
No 245
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=7.3e-35 Score=294.24 Aligned_cols=230 Identities=15% Similarity=0.116 Sum_probs=177.8
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccccC----HHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCC
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAAT----KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~----~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.. +++.||||++...... .+.+.+|++++..+ +||||+++++++...+..++||||++
T Consensus 36 ~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 114 (286)
T 3uqc_A 36 LIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRI-DKPGVARVLDVVHTRAGGLVVAEWIR 114 (286)
T ss_dssp EEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred EEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcC-CCCCcceeeEEEEECCcEEEEEEecC
Confidence 368999999999999976 4899999999765332 36789999999999 99999999999999999999999999
Q ss_pred CCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCC
Q 006884 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTT 493 (627)
Q Consensus 414 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~ 493 (627)
+++|.+++... .....+.+++.|++.||.|||+++ |+||||||+|||++.++.+||+++|
T Consensus 115 g~~L~~~l~~~-------~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~---------- 174 (286)
T 3uqc_A 115 GGSLQEVADTS-------PSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPA---------- 174 (286)
T ss_dssp EEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCC----------
T ss_pred CCCHHHHHhcC-------CChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEecc----------
Confidence 99999999532 345578899999999999999998 9999999999999999999998543
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChH
Q 006884 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVE 573 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 573 (627)
|++ .++.++||||||+++|||++|+.||......+.... ............. ......
T Consensus 175 ------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~- 232 (286)
T 3uqc_A 175 ------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP-------AERDTAGQPIEPA-DIDRDI- 232 (286)
T ss_dssp ------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE-------CCBCTTSCBCCHH-HHCTTS-
T ss_pred ------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH-------HHHHhccCCCChh-hcccCC-
Confidence 443 378999999999999999999999987543321100 0000000000000 001111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccccc
Q 006884 574 EEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRN 614 (627)
Q Consensus 574 ~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~~~~~~~~~ 614 (627)
...+.+++.+||+.||++| |+.|+++.|+++.....+.
T Consensus 233 --~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~~~ 270 (286)
T 3uqc_A 233 --PFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVADRT 270 (286)
T ss_dssp --CHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-----
T ss_pred --CHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCCcc
Confidence 2346778889999999999 9999999999987765543
No 246
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=7.5e-36 Score=329.07 Aligned_cols=267 Identities=21% Similarity=0.303 Sum_probs=201.2
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEee------CCceeEEE
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYS------KDEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~------~~~~~lv~ 409 (627)
.+.||+|+||.||+|... +|+.||||++.... ...+.+.+|++++.++ +||||+++++++.. .+..++||
T Consensus 19 ~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~v~~~~~~~~~~~~~~LVm 97 (676)
T 3qa8_A 19 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL-NHPNVVSAREVPDGLQKLAPNDLPLLAM 97 (676)
T ss_dssp CCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHC-CBTTBCCEEECCTTTCCCCTTSSCCCEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCCCCceeeeecccccccCCCeEEEEE
Confidence 478999999999999965 68999999987542 2356788999999999 99999999998765 66779999
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC---eEEeeccccc
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN---GCISDVGLAH 486 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~---~ki~DfG~a~ 486 (627)
||+++|+|.+++..... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++. +||+|||++.
T Consensus 98 Ey~~ggsL~~~L~~~~~--~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~DFG~a~ 172 (676)
T 3qa8_A 98 EYCEGGDLRKYLNQFEN--CCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK 172 (676)
T ss_dssp ECCSSCBHHHHHHSSSC--TTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECSCCCCC
T ss_pred EeCCCCCHHHHHHhccc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEccccccc
Confidence 99999999999986432 235888999999999999999999998 999999999999997765 8999999998
Q ss_pred ccCCC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHH--------h-h
Q 006884 487 LINFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSV--------V-R 554 (627)
Q Consensus 487 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~--------~-~ 554 (627)
..... ....+|+.|+|||++.+..++.++||||||+++|||++|+.||..... ...|.... . .
T Consensus 173 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-----~~~~~~~i~~~~~~~~~~~ 247 (676)
T 3qa8_A 173 ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ-----PVQWHGKVREKSNEHIVVY 247 (676)
T ss_dssp BTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH-----HHHSSTTCC------CCSC
T ss_pred ccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc-----hhhhhhhhhcccchhhhhh
Confidence 76543 234678999999999999999999999999999999999999965311 00000000 0 0
Q ss_pred hccccc-ccchhhhcC-CChHHHHHHHHHHHHHcccCCCCCCCCHHH-----HHHHHHhhcccccccCC
Q 006884 555 EEWTAE-VFDVELLKY-QDVEEEMVQMLQIALSCVAKVPDSRPKMDD-----VVRMIEQIQQPELRNRA 616 (627)
Q Consensus 555 ~~~~~~-~~d~~l~~~-~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~e-----v~~~L~~~~~~~~~~~~ 616 (627)
+..... .+....... .........+.+++.+||..||++|||++| ..+.++.+....+...+
T Consensus 248 ~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~kil~~f 316 (676)
T 3qa8_A 248 DDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLKLLSVM 316 (676)
T ss_dssp CCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCCCEEECC
T ss_pred hhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhccccccc
Confidence 000000 000000000 111234456788899999999999999998 66788888776654433
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.9e-35 Score=334.47 Aligned_cols=233 Identities=18% Similarity=0.265 Sum_probs=188.9
Q ss_pred hcccCcCCceEEEEEEEc--CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCc-----eeEEE
Q 006884 339 AEVLGKGSYGSTYKAILE--DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDE-----KLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~-----~~lv~ 409 (627)
.+.||+|+||.||++++. +++.||||++.... ...+.+.+|++++..+ +||||+++++++...+. .++||
T Consensus 85 ~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~~~~~~lv~ 163 (681)
T 2pzi_A 85 KGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEV-VHPSIVQIFNFVEHTDRHGDPVGYIVM 163 (681)
T ss_dssp EEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEEECTTSCEEEEEEE
T ss_pred EEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhc-CCCCcCeEeeeEeecCCCCCceeEEEE
Confidence 468999999999999975 58999999986532 2345688999999999 89999999999987665 69999
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||+++++|.+++.. .+++..++.++.|++.||.|||+++ |+||||||+|||++.+ .+||+|||+++...
T Consensus 164 E~~~g~~L~~~~~~-------~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~a~~~~ 232 (681)
T 2pzi_A 164 EYVGGQSLKRSKGQ-------KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAVSRIN 232 (681)
T ss_dssp ECCCCEECC----C-------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTTCEETT
T ss_pred EeCCCCcHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEecccchhcc
Confidence 99999999887653 4899999999999999999999998 9999999999999986 89999999999887
Q ss_pred CCCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006884 490 FPTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 490 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
......||++|+|||++.+. ++.++|||||||++|||++|..||.......... .
T Consensus 233 ~~~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~~------------------------~ 287 (681)
T 2pzi_A 233 SFGYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPE------------------------D 287 (681)
T ss_dssp CCSCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSCCT------------------------T
T ss_pred cCCccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccccc------------------------c
Confidence 76677799999999998765 4899999999999999999998886432111100 0
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHhhc
Q 006884 570 QDVEEEMVQMLQIALSCVAKVPDSRP-KMDDVVRMIEQIQ 608 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~P~~RP-s~~ev~~~L~~~~ 608 (627)
.........+.+++.+||+.||++|| +++++...|..+.
T Consensus 288 ~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 288 DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp CHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred ccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 00111224577899999999999999 5666666666653
No 248
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.2e-34 Score=294.82 Aligned_cols=226 Identities=17% Similarity=0.286 Sum_probs=174.8
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEee----CCceeEEEecCCC
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS----KDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~----~~~~~lv~e~~~~ 414 (627)
+.||+|+||.||++... +++.||+|+++. ...+.+|++++.++.+||||+++++++.. ....++||||+++
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~ 99 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 99 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCS
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEecc----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCC
Confidence 67999999999999974 689999999864 34577888888676699999999999886 6678999999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC---CCCeEEeecccccccCCC
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ---DLNGCISDVGLAHLINFP 491 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~---~~~~ki~DfG~a~~~~~~ 491 (627)
|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++. ++.+||+|||++....
T Consensus 100 ~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-- 171 (299)
T 3m2w_A 100 GELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-- 171 (299)
T ss_dssp CBHHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECT--
T ss_pred CcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEeccccccccc--
Confidence 99999998643 246899999999999999999999998 999999999999998 7899999999986542
Q ss_pred CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006884 492 TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
+..++.++||||||+++|||++|+.||.......... ..................
T Consensus 172 ----------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~-- 226 (299)
T 3m2w_A 172 ----------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP-------GMKTRIRMGQYEFPNPEW-- 226 (299)
T ss_dssp ----------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------C-------CSCCSSCTTCCSSCHHHH--
T ss_pred ----------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhH-------HHHHHHhhccccCCchhc--
Confidence 2457889999999999999999999997543221100 000000000000000000
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006884 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 603 (627)
......+.+++.+||+.+|++|||+.|++++
T Consensus 227 -~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 227 -SEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp -TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -ccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 1123457788889999999999999999984
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.5e-35 Score=313.49 Aligned_cols=236 Identities=12% Similarity=0.123 Sum_probs=173.4
Q ss_pred hcccCcCCceEEEEEEEc-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccC-Cceece---------e-------
Q 006884 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKH-SNVVPV---------R------- 396 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~e~~~l~~l~~h-~niv~~---------~------- 396 (627)
.+.||+|+||.||+|++. +|+.||||++.... ...+.+.+|+.++..+ .| +|.... .
T Consensus 83 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (413)
T 3dzo_A 83 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLL-RGIKNQKQAKVHLRFIFPFDLVKDPQ 161 (413)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGS-TTCCSHHHHHHHTCBCCCCEEEECCC
T ss_pred ecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhh-ccCCCHHHHHHhcccccchhhcccCC
Confidence 368999999999999955 68999999987332 2346788999888888 44 322111 1
Q ss_pred -----eEEee-----CCceeEEEecCCCCcHHHHhhhcC--CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC
Q 006884 397 -----AYYYS-----KDEKLVVYSYMPAGSLFMLLHRNR--SDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNI 464 (627)
Q Consensus 397 -----~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~--~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dl 464 (627)
.++.. ....+++|+++ +++|.+++.... ......+++..++.++.|++.||.|||+++ |+||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---iiHrDi 237 (413)
T 3dzo_A 162 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYL 237 (413)
T ss_dssp ---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EECSCC
T ss_pred CCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCc
Confidence 11111 12345666655 789999885321 112345788999999999999999999998 999999
Q ss_pred CCCCeEecCCCCeEEeecccccccCCC-CCCCCCccccCcccc----------CCCCCCCcchhHHHHHHHHHHHhCCCC
Q 006884 465 KSSNVLLTQDLNGCISDVGLAHLINFP-TTATRTIGYRAPEVT----------ETRKASQKSDVYSFGVLLLEMLTGKAP 533 (627)
Q Consensus 465 kp~NILl~~~~~~ki~DfG~a~~~~~~-~~~~~t~~y~aPE~~----------~~~~~~~~~Dv~S~Gvvl~el~tg~~p 533 (627)
||+|||++.++.+||+|||+++..... ....| +.|+|||++ .+..++.++|||||||++|||++|+.|
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~P 316 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLP 316 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCC
T ss_pred ccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCC
Confidence 999999999999999999998776443 33456 999999999 566688999999999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006884 534 LQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 534 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 602 (627)
|......+.. ...+......+ ..+.+++.+||+.+|++||++.|+++
T Consensus 317 f~~~~~~~~~-------------------~~~~~~~~~~~---~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 317 NTDDAALGGS-------------------EWIFRSCKNIP---QPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp CCTTGGGSCS-------------------GGGGSSCCCCC---HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCcchhhhH-------------------HHHHhhcccCC---HHHHHHHHHHccCChhhCcCHHHHHh
Confidence 9764322111 11111111222 35677888999999999999877754
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=2.5e-34 Score=297.58 Aligned_cols=234 Identities=14% Similarity=0.161 Sum_probs=179.0
Q ss_pred HHhcccCcCCceEEEEEEEcCCcEEEEEEecccc---------cCHHHHHHHHHHHHHhc--------cCCceeceeeEE
Q 006884 337 ASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVA---------ATKREFEQQMEVVGTIG--------KHSNVVPVRAYY 399 (627)
Q Consensus 337 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~---------~~~~~~~~e~~~l~~l~--------~h~niv~~~~~~ 399 (627)
...+.||+|+||.||+|+. +|+.||||++.... ...+.+.+|+++++.+. .||||+++.+.+
T Consensus 23 ~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~ 101 (336)
T 2vuw_A 23 QRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVH 101 (336)
T ss_dssp HTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEE
T ss_pred hheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhccee
Confidence 3468899999999999998 58999999997542 22478999999999885 377777666654
Q ss_pred e-----------------e-------------CCceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHH
Q 006884 400 Y-----------------S-------------KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449 (627)
Q Consensus 400 ~-----------------~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~ 449 (627)
. + .+..++||||+++|++.+.+.+ ..+++..+..++.|++.||.
T Consensus 102 ~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 102 CVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHHHHHHHHH
T ss_pred EecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHHHHHHHHH
Confidence 2 2 6789999999999977666643 35899999999999999999
Q ss_pred HHH-hcCCCCeeecCCCCCCeEecCCC--------------------CeEEeecccccccCCCCCCCCCccccCccccCC
Q 006884 450 FIH-SEGGAKFTHGNIKSSNVLLTQDL--------------------NGCISDVGLAHLINFPTTATRTIGYRAPEVTET 508 (627)
Q Consensus 450 ~LH-~~~~~~ivH~Dlkp~NILl~~~~--------------------~~ki~DfG~a~~~~~~~~~~~t~~y~aPE~~~~ 508 (627)
||| +.+ |+||||||+|||++.++ .+||+|||+|+..... ...||+.|+|||++.+
T Consensus 176 ~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-~~~gt~~y~aPE~~~g 251 (336)
T 2vuw_A 176 VAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-IVVFCDVSMDEDLFTG 251 (336)
T ss_dssp HHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-EEECCCCTTCSGGGCC
T ss_pred HHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-cEEEeecccChhhhcC
Confidence 999 888 99999999999999887 8999999999877543 4578999999999987
Q ss_pred CCCCCcchhHHHHHH-HHHHHhCCCCCCCCCCCCCCCHHHHHHHH----hhhcccccccchhhhcCCChHHHHHHHHHHH
Q 006884 509 RKASQKSDVYSFGVL-LLEMLTGKAPLQHSGHDDVVDLPRWVRSV----VREEWTAEVFDVELLKYQDVEEEMVQMLQIA 583 (627)
Q Consensus 509 ~~~~~~~Dv~S~Gvv-l~el~tg~~pf~~~~~~~~~~~~~~~~~~----~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~ 583 (627)
.. +.++||||+|++ .+++++|..||.. ..|.... .......... ..........++.+++
T Consensus 252 ~~-~~~~Diwsl~~~~~~~~~~g~~p~~~---------~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~s~~~~dli 316 (336)
T 2vuw_A 252 DG-DYQFDIYRLMKKENNNRWGEYHPYSN---------VLWLHYLTDKMLKQMTFKTKC-----NTPAMKQIKRKIQEFH 316 (336)
T ss_dssp CS-SHHHHHHHHHHHHHTTCTTSCCTHHH---------HHHHHHHHHHHHHTCCCSSCC-----CSHHHHHHHHHHHHHH
T ss_pred CC-ccceehhhhhCCCCcccccccCCCcc---------hhhhhHHHHhhhhhhccCccc-----chhhhhhcCHHHHHHH
Confidence 66 899999998777 7778889988842 1121111 1110000000 0111234556788899
Q ss_pred HHcccCCCCCCCCHHHHH
Q 006884 584 LSCVAKVPDSRPKMDDVV 601 (627)
Q Consensus 584 ~~Cl~~~P~~RPs~~ev~ 601 (627)
.+||+.+ |++|++
T Consensus 317 ~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 317 RTMLNFS-----SATDLL 329 (336)
T ss_dssp HHGGGSS-----SHHHHH
T ss_pred HHHhccC-----CHHHHH
Confidence 9999976 999987
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=4.2e-29 Score=274.84 Aligned_cols=181 Identities=15% Similarity=0.069 Sum_probs=128.2
Q ss_pred ccCcCCceEEEEEE-EcCCcEEEEEEecccc-----------cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEE
Q 006884 341 VLGKGSYGSTYKAI-LEDGTTVVVKRLREVA-----------ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVV 408 (627)
Q Consensus 341 ~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-----------~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv 408 (627)
..+.|++|.+..++ .--|+.+++|++.... ...++|.+|++++.++..|+||+++++++++++..|+|
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 35667777666654 2348889999986431 12357999999999999999999999999999999999
Q ss_pred EecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 409 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
|||++|++|.+++.+. .+++.. +|+.||+.||+|+|++| ||||||||+|||+++++.+||+|||+|+..
T Consensus 321 MEyv~G~~L~d~i~~~-----~~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~ 389 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAG-----EEIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTT 389 (569)
T ss_dssp EECCCSEEHHHHHHTT-----CCCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred EecCCCCcHHHHHHhC-----CCCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeC
Confidence 9999999999999864 345543 58999999999999999 999999999999999999999999999876
Q ss_pred CCCC----CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCC
Q 006884 489 NFPT----TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAP 533 (627)
Q Consensus 489 ~~~~----~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p 533 (627)
.... +..||++|||||++.+ .+..++|+||+|++++++.++..+
T Consensus 390 ~~~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 390 PQDCSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp C---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCCCccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 5432 2347999999999976 467889999999998877655443
No 252
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.94 E-value=9.9e-27 Score=237.86 Aligned_cols=189 Identities=32% Similarity=0.635 Sum_probs=167.2
Q ss_pred cCChhHHHHHHHHHhhCCCC-CCCCCCCCCCCCCC--ccceEeeCCC--CcEEEEEcCCCCccc--ccCccccCCCCccc
Q 006884 25 ADLNSDKQALLDFADAVPHA-RKLNWNAAAPVCSS--WIGVTCNVNR--SRVIGIHLPGIGFTG--PIPANSIGKLDALK 97 (627)
Q Consensus 25 ~~~~~~~~~l~~~~~~~~~~-~~~~W~~~~~~c~~--w~gv~C~~~~--~~v~~L~l~~~~l~~--~~~~~~~~~l~~L~ 97 (627)
.|...|.+||++||+++.++ ...+|+.++++| . |.||+|+... ++|+.|+|++|+++| .+|. .|+++++|+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C-~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~-~l~~l~~L~ 79 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCC-NRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPS-SLANLPYLN 79 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTT-TTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCG-GGGGCTTCS
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCC-cCCCcceEeCCCCCCceEEEEECCCCCccCCcccCh-hHhCCCCCC
Confidence 46778999999999999544 345898766666 5 9999998654 799999999999999 8998 899999999
Q ss_pred EEEccC-CcCCCCCCCCcCccccccEEeeccccccccCchhh-c-cccceeccccccccCCCchhhhccccccccccccc
Q 006884 98 ILSLRS-NYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFR-S-LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNN 174 (627)
Q Consensus 98 ~L~L~~-N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~-~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N 174 (627)
.|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..+ . .+|++|+|++|.|++.+|..|..+++|++|+|++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999995 99999999999999999999999999998888644 3 38999999999999999999999999999999999
Q ss_pred cccccCCCC--CCC-ccceEeccCCCccccCCCcCCCCCCCcccC
Q 006884 175 SISGAIPPL--NLP-RLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 175 ~l~~~~~~~--~~~-~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
++++.+|.. .++ +|+.|++++|++++.+|..+..+. |+.++
T Consensus 160 ~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~ 203 (313)
T 1ogq_A 160 RISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVD 203 (313)
T ss_dssp CCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEE
T ss_pred cccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEE
Confidence 999888864 676 999999999999999999888876 66654
No 253
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=7.4e-26 Score=247.65 Aligned_cols=177 Identities=16% Similarity=0.211 Sum_probs=144.8
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEeccccc---------CHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEE
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAA---------TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 409 (627)
.+.||+|+||.||++... ++.+++|+...... ..+.+.+|++++.++ +||||+++..++...+..++||
T Consensus 341 ~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALV-KDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp -------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHG-GGGTCCCCCEEEEETTTTEEEE
T ss_pred CCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhc-CCCCcCceEEEEEeCCccEEEE
Confidence 468999999999999654 78899998643211 134589999999999 9999997777777888889999
Q ss_pred ecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006884 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||+++|+|.+++.. +..++.|++.||.|||+++ |+||||||+|||++. .+||+|||+++...
T Consensus 419 E~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~~ 480 (540)
T 3en9_A 419 SYINGKLAKDVIED-------------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKISN 480 (540)
T ss_dssp ECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred ECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEECC
Confidence 99999999999874 4578999999999999998 999999999999998 99999999998875
Q ss_pred CC-----------CCCCCCccccCccccCC--CCCCCcchhHHHHHHHHHHHhCCCCCC
Q 006884 490 FP-----------TTATRTIGYRAPEVTET--RKASQKSDVYSFGVLLLEMLTGKAPLQ 535 (627)
Q Consensus 490 ~~-----------~~~~~t~~y~aPE~~~~--~~~~~~~Dv~S~Gvvl~el~tg~~pf~ 535 (627)
.. ....||+.|+|||++.. ..|+..+|+|+..+-..+-+.++.+|.
T Consensus 481 ~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 481 LDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred CccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 42 13457999999999976 668888999999999999888877664
No 254
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.90 E-value=3.4e-24 Score=245.73 Aligned_cols=191 Identities=24% Similarity=0.359 Sum_probs=153.0
Q ss_pred ccccCChhHHHHHHHHHhhCCCC-CCCCCCCCCCCCCCccceEeeCCCCcEEEEEcCCCCcccc---cCc----------
Q 006884 22 TVVADLNSDKQALLDFADAVPHA-RKLNWNAAAPVCSSWIGVTCNVNRSRVIGIHLPGIGFTGP---IPA---------- 87 (627)
Q Consensus 22 ~~~~~~~~~~~~l~~~~~~~~~~-~~~~W~~~~~~c~~w~gv~C~~~~~~v~~L~l~~~~l~~~---~~~---------- 87 (627)
+...+.+.|++||++||+++.++ .+.+|+.+++|| +|.||+|+ .++|+.|+|+++++.|. +|+
T Consensus 5 ~~~~~~~~~~~all~~k~~~~~~~~l~~W~~~~~~C-~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~ 81 (768)
T 3rgz_A 5 SPSQSLYREIHQLISFKDVLPDKNLLPDWSSNKNPC-TFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLES 81 (768)
T ss_dssp ---CCHHHHHHHHHHHHTTCSCTTSSTTCCTTSCGG-GSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCE
T ss_pred ccccCCHHHHHHHHHHHhhCCCcccccCCCCCCCCc-CCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCcccc
Confidence 33445678999999999998543 455898555555 89999998 48999999999999987 443
Q ss_pred ------------cccCCCCcccEEEccCCcCCCCCCC--CcCccccccEEeeccccccccCchhh--c-cccceeccccc
Q 006884 88 ------------NSIGKLDALKILSLRSNYLNGTLPS--DITSISSLQYVYLQNNYFSGVLPAFR--S-LQLNALDLSFN 150 (627)
Q Consensus 88 ------------~~~~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~ls~N~l~~~~~~~~--~-~~L~~L~ls~N 150 (627)
..|+++++|++|+|++|.++|.+|. .++++++|++|+|++|.+.+..|... . .+|++|+|++|
T Consensus 82 l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n 161 (768)
T 3rgz_A 82 LFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSAN 161 (768)
T ss_dssp EECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSS
T ss_pred cCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCC
Confidence 2688889999999999999988888 89999999999999999988877532 2 37999999999
Q ss_pred cccCCCchh---hhccccccccccccccccccCCCCCCCccceEeccCCCccccCCCcCCCCCCCcccC
Q 006884 151 AFTGNIPPG---FQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 151 ~l~~~~p~~---~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
++++..|.. +.++++|++|++++|++++.+|...+++|++|++++|.+++.+|. ++++++|+.++
T Consensus 162 ~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~ 229 (768)
T 3rgz_A 162 SISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLD 229 (768)
T ss_dssp CCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEE
T ss_pred ccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEE
Confidence 998877776 778888888888888888777766788888888888888877766 77777776654
No 255
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.90 E-value=1.6e-24 Score=247.74 Aligned_cols=185 Identities=26% Similarity=0.435 Sum_probs=159.4
Q ss_pred CChhHHHHHHHHHhhCCCCCCCCCCCCC-----CC-CCCc------------cceEeeCCCCcEEEEEcCCCCcccccCc
Q 006884 26 DLNSDKQALLDFADAVPHARKLNWNAAA-----PV-CSSW------------IGVTCNVNRSRVIGIHLPGIGFTGPIPA 87 (627)
Q Consensus 26 ~~~~~~~~l~~~~~~~~~~~~~~W~~~~-----~~-c~~w------------~gv~C~~~~~~v~~L~l~~~~l~~~~~~ 87 (627)
+...|+.||++||+++..+ +|+.++ ++ ||+| .||+|+. .++|+.|+|++|++.|.+|+
T Consensus 266 ~~~~d~~ALl~~k~~l~~~---~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G~ip~ 341 (876)
T 4ecn_A 266 EYIKDYKALKAIWEALDGK---NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKGRVPD 341 (876)
T ss_dssp HHHHHHHHHHHHHHHTTGG---GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEEEECG
T ss_pred cchHHHHHHHHHHHHcCCC---CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCCcCch
Confidence 3457999999999999644 887554 44 2689 9999986 58999999999999999998
Q ss_pred cccCCCCcccEEEc-cCCcCCCC---------------------------------------------------------
Q 006884 88 NSIGKLDALKILSL-RSNYLNGT--------------------------------------------------------- 109 (627)
Q Consensus 88 ~~~~~l~~L~~L~L-~~N~l~~~--------------------------------------------------------- 109 (627)
.|++|++|+.|+| ++|.++|.
T Consensus 342 -~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~ 420 (876)
T 4ecn_A 342 -AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKD 420 (876)
T ss_dssp -GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCC
T ss_pred -HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccc
Confidence 8999999999999 77765544
Q ss_pred -------------------CCCCcCccccccEEeeccccccc------------------cCchhh--c-cccceecccc
Q 006884 110 -------------------LPSDITSISSLQYVYLQNNYFSG------------------VLPAFR--S-LQLNALDLSF 149 (627)
Q Consensus 110 -------------------~p~~~~~l~~L~~L~ls~N~l~~------------------~~~~~~--~-~~L~~L~ls~ 149 (627)
+|..|+++++|++|+|++|+|++ +|+.+. . .+|+.|+|++
T Consensus 421 ~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~ 500 (876)
T 4ecn_A 421 SRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYN 500 (876)
T ss_dssp CCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEES
T ss_pred cccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcC
Confidence 88899999999999999999999 444443 4 4899999999
Q ss_pred ccccCCCchhhhcccccccccccccc-ccc-cCCCC---------CCCccceEeccCCCccccCCC--cCCCCCCCcccC
Q 006884 150 NAFTGNIPPGFQNLTRLHLLNLQNNS-ISG-AIPPL---------NLPRLKILNFSNNNLNGSIPD--SLQTFPNSSFVG 216 (627)
Q Consensus 150 N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~-~~~~~---------~~~~L~~L~l~~N~l~~~~p~--~~~~~~~l~~~~ 216 (627)
|++.+.+|..|+++++|+.|+|++|+ |+| .+|.. .+++|+.|+|++|+++ .+|. .+.++++|+.++
T Consensus 501 N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~ 579 (876)
T 4ecn_A 501 CPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLD 579 (876)
T ss_dssp CTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEE
T ss_pred CCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEE
Confidence 99999999999999999999999998 998 66642 4569999999999999 8998 899998888774
No 256
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.89 E-value=2.6e-24 Score=241.30 Aligned_cols=184 Identities=27% Similarity=0.450 Sum_probs=159.0
Q ss_pred hhHHHHHHHHHhhCCCCCC----------CCCCCCCCCCCCc---cceEeeCCCCcEEEEEcCCCCcccccCccccCCCC
Q 006884 28 NSDKQALLDFADAVPHARK----------LNWNAAAPVCSSW---IGVTCNVNRSRVIGIHLPGIGFTGPIPANSIGKLD 94 (627)
Q Consensus 28 ~~~~~~l~~~~~~~~~~~~----------~~W~~~~~~c~~w---~gv~C~~~~~~v~~L~l~~~~l~~~~~~~~~~~l~ 94 (627)
..|+.||.+|+.++..... .+|+...++| .| .||+|+.. ++|+.|+|+++++.|.+|+ .|++|+
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c-~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~-~l~~L~ 105 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELD-MWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPD-AIGQLT 105 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGG-GTTCCTTEEECTT-CCEEEEECTTSCCEEEECG-GGGGCT
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcc-cccCCCCeEEcCC-CCEEEEEecCcccCCcCCh-HHhcCc
Confidence 4699999999999843322 2698665555 89 99999865 8999999999999999998 899999
Q ss_pred cccEEEccCCc---------------------------------------------------------------------
Q 006884 95 ALKILSLRSNY--------------------------------------------------------------------- 105 (627)
Q Consensus 95 ~L~~L~L~~N~--------------------------------------------------------------------- 105 (627)
+|+.|+|++|.
T Consensus 106 ~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~ 185 (636)
T 4eco_A 106 ELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKD 185 (636)
T ss_dssp TCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCT
T ss_pred cceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhh
Confidence 99999999884
Q ss_pred ---------CCCCCCCCcCccccccEEeeccccccc------------------cCchhh--c-cccceeccccccccCC
Q 006884 106 ---------LNGTLPSDITSISSLQYVYLQNNYFSG------------------VLPAFR--S-LQLNALDLSFNAFTGN 155 (627)
Q Consensus 106 ---------l~~~~p~~~~~l~~L~~L~ls~N~l~~------------------~~~~~~--~-~~L~~L~ls~N~l~~~ 155 (627)
|+| +|..|+++++|++|+|++|++++ +++.+. . .+|++|+|++|++.|.
T Consensus 186 l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~ 264 (636)
T 4eco_A 186 TQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTK 264 (636)
T ss_dssp TTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSS
T ss_pred hhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCcc
Confidence 445 88899999999999999999999 454555 4 3899999999999999
Q ss_pred Cchhhhcccccccccccccc-ccc-cCCCC--CC------CccceEeccCCCccccCCC--cCCCCCCCcccC
Q 006884 156 IPPGFQNLTRLHLLNLQNNS-ISG-AIPPL--NL------PRLKILNFSNNNLNGSIPD--SLQTFPNSSFVG 216 (627)
Q Consensus 156 ~p~~~~~l~~L~~L~l~~N~-l~~-~~~~~--~~------~~L~~L~l~~N~l~~~~p~--~~~~~~~l~~~~ 216 (627)
+|..|+++++|++|+|++|+ ++| .+|.. .+ ++|+.|++++|+++ .+|. .++++++|+.++
T Consensus 265 ~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~ 336 (636)
T 4eco_A 265 LPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLE 336 (636)
T ss_dssp CCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEE
T ss_pred ChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEe
Confidence 99999999999999999998 998 77753 44 89999999999999 8998 899998888775
No 257
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=4.7e-22 Score=199.47 Aligned_cols=138 Identities=17% Similarity=0.192 Sum_probs=112.5
Q ss_pred cccCcCCceEEEEEEEcCCcEEEEEEeccccc-------------------CHHHHHHHHHHHHHhccCCceeceeeEEe
Q 006884 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAA-------------------TKREFEQQMEVVGTIGKHSNVVPVRAYYY 400 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-------------------~~~~~~~e~~~l~~l~~h~niv~~~~~~~ 400 (627)
+.||+|+||.||+|...+|+.||+|.++.... ....+.+|++++.++. | +++.+++.
T Consensus 96 ~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~---~-~~v~~~~~ 171 (282)
T 1zar_A 96 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ---G-LAVPKVYA 171 (282)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT---T-SSSCCEEE
T ss_pred CEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc---C-CCcCeEEe
Confidence 78999999999999997799999999864321 2356889999999994 4 56666544
Q ss_pred eCCceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEe
Q 006884 401 SKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCIS 480 (627)
Q Consensus 401 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~ 480 (627)
.+..++||||+++|+|.+ +.. .....++.|++.||.|||+.+ |+||||||+|||++ ++.+||+
T Consensus 172 -~~~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NILl~-~~~vkl~ 234 (282)
T 1zar_A 172 -WEGNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLVS-EEGIWII 234 (282)
T ss_dssp -EETTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEE-TTEEEEC
T ss_pred -ccceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEEEE-CCcEEEE
Confidence 356699999999999987 421 124469999999999999998 99999999999999 9999999
Q ss_pred ecccccccCCCCCCCCCccccCccccC
Q 006884 481 DVGLAHLINFPTTATRTIGYRAPEVTE 507 (627)
Q Consensus 481 DfG~a~~~~~~~~~~~t~~y~aPE~~~ 507 (627)
|||+++.. ..|+|||++.
T Consensus 235 DFG~a~~~---------~~~~a~e~l~ 252 (282)
T 1zar_A 235 DFPQSVEV---------GEEGWREILE 252 (282)
T ss_dssp CCTTCEET---------TSTTHHHHHH
T ss_pred ECCCCeEC---------CCCCHHHHHH
Confidence 99998744 3468888874
No 258
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.85 E-value=2.5e-22 Score=206.52 Aligned_cols=187 Identities=18% Similarity=0.318 Sum_probs=147.5
Q ss_pred cCChhHHHHHHHHHhhCC---CCCCCCCC---CCCCCCCCccceEeeC--------CCCcEEEEEcCCCCcccccCcccc
Q 006884 25 ADLNSDKQALLDFADAVP---HARKLNWN---AAAPVCSSWIGVTCNV--------NRSRVIGIHLPGIGFTGPIPANSI 90 (627)
Q Consensus 25 ~~~~~~~~~l~~~~~~~~---~~~~~~W~---~~~~~c~~w~gv~C~~--------~~~~v~~L~l~~~~l~~~~~~~~~ 90 (627)
.++.++..||++||+.+. .....+|. .....||.|.|+.|.. ...+|+.|+|++|+++ .+|. .+
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~-~l 100 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPD-QA 100 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCS-CG
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcCh-hh
Confidence 456689999999999772 22234784 2233344799999952 3478999999999998 8888 68
Q ss_pred CCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhcc-ccceeccccccccCCCchhhhc-------
Q 006884 91 GKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSL-QLNALDLSFNAFTGNIPPGFQN------- 162 (627)
Q Consensus 91 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~-~L~~L~ls~N~l~~~~p~~~~~------- 162 (627)
+++++|+.|+|++|.|+ .+|..++.+++|++|+|++|+++.+++.+... +|++|+|++|++.+.+|..+..
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~ 179 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLRALPASIASLNRLRELSIRACPELTELPEPLASTDASGEH 179 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCCCCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCE
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccccCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhh
Confidence 88999999999999999 89999999999999999999999665555553 7999999998888888877654
Q ss_pred --cccccccccccccccccCCCC--CCCccceEeccCCCccccCCCcCCCCCCCcccC
Q 006884 163 --LTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 163 --l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
+++|++|+|++|+|+ .+|.. .+++|+.|+|++|+++ .+|..+..+++|+.++
T Consensus 180 ~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~ 235 (328)
T 4fcg_A 180 QGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELD 235 (328)
T ss_dssp EESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEE
T ss_pred ccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEE
Confidence 888888888888888 55543 7788888888888888 4666777777777664
No 259
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.84 E-value=1.4e-21 Score=224.17 Aligned_cols=114 Identities=36% Similarity=0.663 Sum_probs=92.0
Q ss_pred cccccEEeeccccccccCchhhc--cccceeccccccccCCCchhhhccccccccccccccccccCCCC--CCCccceEe
Q 006884 117 ISSLQYVYLQNNYFSGVLPAFRS--LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILN 192 (627)
Q Consensus 117 l~~L~~L~ls~N~l~~~~~~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~ 192 (627)
+++|++|||++|+++|.+|..+. .+|+.|+|++|+|+|.+|..|+++++|+.|||++|+++|.+|.. .+++|++|+
T Consensus 631 l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 710 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID 710 (768)
T ss_dssp SBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEE
T ss_pred cccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEE
Confidence 45667777777777777665333 26888888888888888888888888888888888888888865 788888999
Q ss_pred ccCCCccccCCCc--CCCCCCCcccCCCCCCCCCCCCCCC
Q 006884 193 FSNNNLNGSIPDS--LQTFPNSSFVGNSMLCGLPLTPCST 230 (627)
Q Consensus 193 l~~N~l~~~~p~~--~~~~~~l~~~~n~~l~~~~~~~c~~ 230 (627)
+++|+++|.+|.. +..++.+.|.||+++||.|+.+|..
T Consensus 711 ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~~C~~ 750 (768)
T 3rgz_A 711 LSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDP 750 (768)
T ss_dssp CCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSCCCCS
T ss_pred CcCCcccccCCCchhhccCCHHHhcCCchhcCCCCcCCCC
Confidence 9999999888864 6678888899999999999888865
No 260
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.83 E-value=1.4e-20 Score=185.75 Aligned_cols=153 Identities=22% Similarity=0.260 Sum_probs=129.6
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc--cccceec
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNALD 146 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~--~~L~~L~ 146 (627)
..++.|+|++|++++..+. .|.++++|+.|+|++|.|++..|..|..+++|++|+|++|++++.++..+. .+|++|+
T Consensus 35 ~~l~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 113 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDA-TFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLY 113 (251)
T ss_dssp TTCCEEECTTSCCCCCCTT-TTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEEccCCCcCccCHh-HhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEE
Confidence 4688999999999965555 799999999999999999988888899999999999999999998876543 4899999
Q ss_pred cccccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCCCcCCCCCCCccc---CCCCCC
Q 006884 147 LSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV---GNSMLC 221 (627)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~---~n~~l~ 221 (627)
|++|+|++..+..|..+++|+.|+|++|+|++.++.. .+++|+.|+|++|++++..+..+..+++|+.+ +|+..|
T Consensus 114 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 114 LGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred cCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 9999999766667899999999999999999776643 78999999999999997777788877777655 566555
Q ss_pred C
Q 006884 222 G 222 (627)
Q Consensus 222 ~ 222 (627)
.
T Consensus 194 ~ 194 (251)
T 3m19_A 194 S 194 (251)
T ss_dssp T
T ss_pred C
Confidence 4
No 261
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=1.3e-19 Score=176.22 Aligned_cols=151 Identities=23% Similarity=0.225 Sum_probs=102.4
Q ss_pred CCCCCCCCCCccceEeeCC---------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCcccc
Q 006884 49 WNAAAPVCSSWIGVTCNVN---------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISS 119 (627)
Q Consensus 49 W~~~~~~c~~w~gv~C~~~---------~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 119 (627)
|......| +|.+|.|+.. ..+++.|+|++|++++..|. .|..+++|+.|+|++|+|++..+..|..+++
T Consensus 12 ~~~~~~~C-s~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~ 89 (229)
T 3e6j_A 12 ACPSQCSC-SGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPG-VFDSLINLKELYLGSNQLGALPVGVFDSLTQ 89 (229)
T ss_dssp CCCTTCEE-ETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTT-TTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred cCCCCCEE-eCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHH-HhhCccCCcEEECCCCCCCCcChhhcccCCC
Confidence 44445556 7999999752 24567777777777755554 6777777777777777776444455677777
Q ss_pred ccEEeeccccccccCchhhc--cccceeccccccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccC
Q 006884 120 LQYVYLQNNYFSGVLPAFRS--LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSN 195 (627)
Q Consensus 120 L~~L~ls~N~l~~~~~~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~ 195 (627)
|++|+|++|+|+++++..+. .+|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+.. .+++|+.|+|++
T Consensus 90 L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 168 (229)
T 3e6j_A 90 LTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFG 168 (229)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred cCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeC
Confidence 77777777777776665432 36777777777777 56777777777777777777777554432 567777777777
Q ss_pred CCccccC
Q 006884 196 NNLNGSI 202 (627)
Q Consensus 196 N~l~~~~ 202 (627)
|++++..
T Consensus 169 N~~~c~c 175 (229)
T 3e6j_A 169 NPWDCEC 175 (229)
T ss_dssp SCBCTTB
T ss_pred CCccCCc
Confidence 7776443
No 262
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.79 E-value=4.5e-20 Score=188.35 Aligned_cols=141 Identities=23% Similarity=0.386 Sum_probs=93.9
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccc-cccEEeeccccccccCchh-hccccceec
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSIS-SLQYVYLQNNYFSGVLPAF-RSLQLNALD 146 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~ls~N~l~~~~~~~-~~~~L~~L~ 146 (627)
.+++.|+|++|.+++.+|. .+..+++|+.|+|++|.+++.+|..++.++ +|++|+|++|++++.+|.. ...+|+.|+
T Consensus 125 ~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~ 203 (313)
T 1ogq_A 125 KTLVTLDFSYNALSGTLPP-SISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVD 203 (313)
T ss_dssp TTCCEEECCSSEEESCCCG-GGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEE
T ss_pred CCCCEEeCCCCccCCcCCh-HHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEE
Confidence 5688888888888888887 788888888888888888888888888887 8888888888888776643 333566666
Q ss_pred cccccccCCCchhhhccccccccccccccccccCCCC-CCCccceEeccCCCccccCCCcCCCCC
Q 006884 147 LSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL-NLPRLKILNFSNNNLNGSIPDSLQTFP 210 (627)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~~~~ 210 (627)
|++|++++.+|..|..+++|+.|+|++|++++.+|.. .+++|++|++++|++++.+|..+..++
T Consensus 204 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 268 (313)
T 1ogq_A 204 LSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLK 268 (313)
T ss_dssp CCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCT
T ss_pred CcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCc
Confidence 6666666666666655555555555555555444432 334444444444444444444333333
No 263
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.78 E-value=9.4e-19 Score=174.63 Aligned_cols=146 Identities=20% Similarity=0.294 Sum_probs=103.2
Q ss_pred cEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc--cccceecc
Q 006884 70 RVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNALDL 147 (627)
Q Consensus 70 ~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~--~~L~~L~l 147 (627)
.++.|+|++|++++ ++...|.++++|+.|+|++|.|+...+..|..+++|++|+|++|+++++++..+. .+|++|+|
T Consensus 38 ~l~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 38 DTKKLDLQSNKLSS-LPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TCSEEECCSSCCSC-CCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCEEECcCCCCCe-eCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 46777777777774 3433677778888888888887744444557778888888888887777665433 36788888
Q ss_pred ccccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCCCcCCCCCCCcccC
Q 006884 148 SFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
++|++++..|..|..+++|++|+|++|+|++..+.. .+++|+.|++++|++++..+..|..+++|+.++
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 187 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLK 187 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEE
Confidence 888877666666777778888888888777655542 677778888888877765556677777776654
No 264
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=4.5e-19 Score=171.15 Aligned_cols=149 Identities=19% Similarity=0.261 Sum_probs=98.8
Q ss_pred EEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCC-CCcCccccccEEeeccccccccCch-hhc-cccceecccc
Q 006884 73 GIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLP-SDITSISSLQYVYLQNNYFSGVLPA-FRS-LQLNALDLSF 149 (627)
Q Consensus 73 ~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~~~-~~~-~~L~~L~ls~ 149 (627)
.+++++|+++ .+|. .+ .+.++.|+|++|+|++..| ..|..+++|++|+|++|+|+++++. +.. .+|++|+|++
T Consensus 15 ~l~~s~n~l~-~iP~-~~--~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 15 TVDCSNQKLN-KIPE-HI--PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EEECCSSCCS-SCCS-CC--CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EeEeCCCCcc-cCcc-CC--CCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 5666667766 4565 33 2345677777777775544 3466777777777777777777664 333 2677777777
Q ss_pred ccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCCCcCCCCCCCccc---CCCCCCCCC
Q 006884 150 NAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV---GNSMLCGLP 224 (627)
Q Consensus 150 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~---~n~~l~~~~ 224 (627)
|+|++..|..|.++++|++|+|++|+|++..|.. .+++|+.|+|++|++++..|..|..+++|+.+ +|++.|+++
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 7777666666777777777777777777665543 67777777777777776667777666665543 566666654
Q ss_pred C
Q 006884 225 L 225 (627)
Q Consensus 225 ~ 225 (627)
+
T Consensus 171 l 171 (220)
T 2v70_A 171 L 171 (220)
T ss_dssp G
T ss_pred h
Confidence 3
No 265
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.77 E-value=1.3e-18 Score=166.50 Aligned_cols=146 Identities=22% Similarity=0.279 Sum_probs=120.4
Q ss_pred CCccceEeeCC---------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeecc
Q 006884 57 SSWIGVTCNVN---------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQN 127 (627)
Q Consensus 57 ~~w~gv~C~~~---------~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~ 127 (627)
|.|.+|.|+.. ..+++.|+|++|++++ ++...|..+++|+.|+|++|+|++..+..|..+++|++|+|++
T Consensus 7 C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 7 CSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKS-LPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCC-CCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCc-CChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 48999999752 3468999999999984 5554788999999999999999966666678999999999999
Q ss_pred ccccccCchhh-c-cccceeccccccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCC
Q 006884 128 NYFSGVLPAFR-S-LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIP 203 (627)
Q Consensus 128 N~l~~~~~~~~-~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p 203 (627)
|+++++++..+ . .+|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+.. .+++|+.|++++|++.+..|
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC
Confidence 99998887643 3 38999999999999766667889999999999999999766643 78899999999998875543
No 266
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.77 E-value=1e-18 Score=168.74 Aligned_cols=130 Identities=23% Similarity=0.284 Sum_probs=63.3
Q ss_pred CcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc--cccceeccccccccCCCchhhhcccccccccc
Q 006884 94 DALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNL 171 (627)
Q Consensus 94 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 171 (627)
++|+.|+|++|+|++..|..|..+++|++|+|++|+++++.|..+. .+|++|+|++|+|++..+..|.++++|+.|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 3455555555555544444555555555555555555555443222 24555555555555333333455555555555
Q ss_pred ccccccccCCCC--CCCccceEeccCCCccccCCCcCCCCCCCccc---CCCCCCCC
Q 006884 172 QNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV---GNSMLCGL 223 (627)
Q Consensus 172 ~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~---~n~~l~~~ 223 (627)
++|+|++..|.. .+++|+.|+|++|++++..+..+..+++|+.+ +|++.|++
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDC 168 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCC
Confidence 555555444432 45555555555555554444444444444332 44444543
No 267
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.76 E-value=1.9e-18 Score=171.11 Aligned_cols=133 Identities=16% Similarity=0.170 Sum_probs=102.3
Q ss_pred hcccCcCCceEEEEEEE-cCCcE--EEEEEecccccC-------------------------HHHHHHHHHHHHHhccCC
Q 006884 339 AEVLGKGSYGSTYKAIL-EDGTT--VVVKRLREVAAT-------------------------KREFEQQMEVVGTIGKHS 390 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~-------------------------~~~~~~e~~~l~~l~~h~ 390 (627)
.+.||+|+||.||+|.. .+|+. ||||+++..... ...+.+|++++.++ .|+
T Consensus 52 ~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~ 130 (258)
T 1zth_A 52 GGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA-KEA 130 (258)
T ss_dssp EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH-HHT
T ss_pred CCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH-HhC
Confidence 36799999999999997 67888 999987543111 13678899999999 676
Q ss_pred ce--eceeeEEeeCCceeEEEecCCC-C----cHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCeeec
Q 006884 391 NV--VPVRAYYYSKDEKLVVYSYMPA-G----SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH-SEGGAKFTHG 462 (627)
Q Consensus 391 ni--v~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH-~~~~~~ivH~ 462 (627)
++ ..++.. +..++||||+.+ | +|.++... .++..+..++.|++.||.||| +.+ |+||
T Consensus 131 ~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~~~g---ivHr 195 (258)
T 1zth_A 131 GVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQEAE---LVHA 195 (258)
T ss_dssp TCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHHTSC---EECS
T ss_pred CCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHHHCC---EEeC
Confidence 54 233322 356899999942 4 67665432 123456789999999999999 888 9999
Q ss_pred CCCCCCeEecCCCCeEEeecccccccC
Q 006884 463 NIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 463 Dlkp~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||||+|||++. .++|+|||+|....
T Consensus 196 Dlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 196 DLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp SCSTTSEEESS--SEEECCCTTCEETT
T ss_pred CCCHHHEEEcC--cEEEEECcccccCC
Confidence 99999999998 99999999997653
No 268
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.76 E-value=5.3e-18 Score=169.38 Aligned_cols=154 Identities=21% Similarity=0.272 Sum_probs=133.4
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc--ccccee
Q 006884 68 RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNAL 145 (627)
Q Consensus 68 ~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~--~~L~~L 145 (627)
..+++.|+|++|++++ ++ .+..+++|+.|+|++|.+++..|..|..+++|++|+|++|++++.++..+. .+|++|
T Consensus 62 l~~L~~L~l~~n~l~~-~~--~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 138 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHD-IS--ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYL 138 (272)
T ss_dssp CTTCCEEECTTSCCCC-CG--GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCcEEECCCCCCCC-ch--hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEE
Confidence 3679999999999986 33 699999999999999999987777889999999999999999999887543 489999
Q ss_pred ccccccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCCCcCCCCCCCccc---CCCCC
Q 006884 146 DLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV---GNSML 220 (627)
Q Consensus 146 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~---~n~~l 220 (627)
+|++|+|++..|..|..+++|+.|++++|+|++..+.. .+++|+.|++++|++++..|..+..+++|+.+ +|+..
T Consensus 139 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (272)
T 3rfs_A 139 NLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 218 (272)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcc
Confidence 99999999877777899999999999999999777654 79999999999999998888778888887765 56666
Q ss_pred CCCC
Q 006884 221 CGLP 224 (627)
Q Consensus 221 ~~~~ 224 (627)
|.++
T Consensus 219 ~~~~ 222 (272)
T 3rfs_A 219 CTCP 222 (272)
T ss_dssp CCTT
T ss_pred ccCc
Confidence 5543
No 269
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.75 E-value=4.9e-18 Score=163.85 Aligned_cols=147 Identities=22% Similarity=0.228 Sum_probs=130.5
Q ss_pred CCccceEeeCC---------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeecc
Q 006884 57 SSWIGVTCNVN---------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQN 127 (627)
Q Consensus 57 ~~w~gv~C~~~---------~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~ 127 (627)
|.|..+.|+.+ ...++.|+|++|++++..+...|..+++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 11 CEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 47999999753 235789999999999776665799999999999999999988888999999999999999
Q ss_pred ccccccCchhhc--cccceeccccccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCC
Q 006884 128 NYFSGVLPAFRS--LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIP 203 (627)
Q Consensus 128 N~l~~~~~~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p 203 (627)
|+++++++..+. .+|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|.. .+++|+.|+|++|++++..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 999999987443 48999999999999888999999999999999999999887764 89999999999999986544
No 270
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.75 E-value=7.2e-18 Score=168.20 Aligned_cols=156 Identities=21% Similarity=0.262 Sum_probs=133.6
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc--ccccee
Q 006884 68 RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNAL 145 (627)
Q Consensus 68 ~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~--~~L~~L 145 (627)
-.+++.|+|++|+++ .+|...|..+++|+.|+|++|.+++..+..|..+++|++|+|++|++++.++..+. .+|++|
T Consensus 60 l~~L~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 138 (270)
T 2o6q_A 60 LTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYL 138 (270)
T ss_dssp CTTCCEEECCSSCCS-CCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCccC-eeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEE
Confidence 367999999999998 56665789999999999999999977777889999999999999999999886543 489999
Q ss_pred ccccccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCCCcCCCCCCCccc---CCCCC
Q 006884 146 DLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV---GNSML 220 (627)
Q Consensus 146 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~---~n~~l 220 (627)
+|++|+|++..+..|..+++|+.|+|++|+|++..+.. .+++|+.|+|++|++++..+..+..+++|+.+ +|++.
T Consensus 139 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 139 SLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 99999999766667999999999999999999866653 78999999999999997666667777776654 67777
Q ss_pred CCCC
Q 006884 221 CGLP 224 (627)
Q Consensus 221 ~~~~ 224 (627)
|++.
T Consensus 219 c~c~ 222 (270)
T 2o6q_A 219 CTCN 222 (270)
T ss_dssp CSSS
T ss_pred CCCc
Confidence 7653
No 271
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.75 E-value=4.8e-18 Score=163.93 Aligned_cols=143 Identities=20% Similarity=0.258 Sum_probs=127.7
Q ss_pred CCccceEeeCC---------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeecc
Q 006884 57 SSWIGVTCNVN---------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQN 127 (627)
Q Consensus 57 ~~w~gv~C~~~---------~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~ 127 (627)
|.|..|.|... ...++.|+|++|++++ +++..|..+++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~-i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 11 CSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKV-IPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp EETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCE-ECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred ECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCC-cCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 47999999752 2479999999999995 4444899999999999999999988899999999999999999
Q ss_pred ccccccCchhhc--cccceeccccccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccc
Q 006884 128 NYFSGVLPAFRS--LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNG 200 (627)
Q Consensus 128 N~l~~~~~~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~ 200 (627)
|+|+++++..+. .+|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+.. .+++|+.|+|++|++..
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 999998887543 48999999999999888999999999999999999999877753 79999999999999974
No 272
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.74 E-value=1.4e-17 Score=161.72 Aligned_cols=155 Identities=23% Similarity=0.291 Sum_probs=130.2
Q ss_pred ccceEeeCCCCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhh
Q 006884 59 WIGVTCNVNRSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFR 138 (627)
Q Consensus 59 w~gv~C~~~~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~ 138 (627)
|..-.|+. +.++.++++++ .+|. .+ .++|+.|+|++|.|++..|..|..+++|++|+|++|+|+++++..+
T Consensus 14 ~~~~~Cs~-----~~v~c~~~~l~-~ip~-~~--~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~ 84 (229)
T 3e6j_A 14 PSQCSCSG-----TTVDCRSKRHA-SVPA-GI--PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVF 84 (229)
T ss_dssp CTTCEEET-----TEEECTTSCCS-SCCS-CC--CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred CCCCEEeC-----CEeEccCCCcC-ccCC-CC--CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhc
Confidence 45556753 45889999987 7887 34 3899999999999999889999999999999999999998887654
Q ss_pred c--cccceeccccccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCCCcCCCCCCCcc
Q 006884 139 S--LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSF 214 (627)
Q Consensus 139 ~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~ 214 (627)
. .+|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|.. .+++|+.|+|++|+|++..+..+..+++|+.
T Consensus 85 ~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 163 (229)
T 3e6j_A 85 DSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTH 163 (229)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred ccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCE
Confidence 3 48999999999999777777899999999999999999 55543 8999999999999999776677887777765
Q ss_pred c---CCCCCCCC
Q 006884 215 V---GNSMLCGL 223 (627)
Q Consensus 215 ~---~n~~l~~~ 223 (627)
+ +|++.|.+
T Consensus 164 L~l~~N~~~c~c 175 (229)
T 3e6j_A 164 AYLFGNPWDCEC 175 (229)
T ss_dssp EECTTSCBCTTB
T ss_pred EEeeCCCccCCc
Confidence 4 67776655
No 273
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.74 E-value=2.1e-18 Score=177.14 Aligned_cols=145 Identities=21% Similarity=0.309 Sum_probs=128.3
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCc---------cccccEEeeccccccccCchhhc
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITS---------ISSLQYVYLQNNYFSGVLPAFRS 139 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~---------l~~L~~L~ls~N~l~~~~~~~~~ 139 (627)
.+++.|+|++|.++ .+|. .++++++|+.|+|++|++.+.+|..+.. +++|++|+|++|+++.++..+..
T Consensus 127 ~~L~~L~Ls~n~l~-~lp~-~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~l~~ 204 (328)
T 4fcg_A 127 AGLETLTLARNPLR-ALPA-SIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPASIAN 204 (328)
T ss_dssp TTCSEEEEESCCCC-CCCG-GGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCCCCGGGGG
T ss_pred CCCCEEECCCCccc-cCcH-HHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcCcchHhhcC
Confidence 57999999999999 8888 7999999999999999998899988765 99999999999999966555554
Q ss_pred c-ccceeccccccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCCCcCCCCCCCcccC
Q 006884 140 L-QLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 140 ~-~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
. +|+.|+|++|++++ +|..+..+++|++|+|++|++.+.+|.. .+++|+.|++++|++.+.+|..+.++++|+.++
T Consensus 205 l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~ 283 (328)
T 4fcg_A 205 LQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLD 283 (328)
T ss_dssp CTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEE
T ss_pred CCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEe
Confidence 4 89999999999995 7778999999999999999999988875 899999999999999999999998888888764
No 274
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.73 E-value=1.7e-18 Score=180.41 Aligned_cols=168 Identities=24% Similarity=0.253 Sum_probs=139.8
Q ss_pred CCccceEeeCC---------CCcEEEEEcCCCCcccccCccccC-CCCcccEEEccCCcCCCCCCCCcCccccccEEeec
Q 006884 57 SSWIGVTCNVN---------RSRVIGIHLPGIGFTGPIPANSIG-KLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQ 126 (627)
Q Consensus 57 ~~w~gv~C~~~---------~~~v~~L~l~~~~l~~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls 126 (627)
|.|..+.|... ...++.|+|++|+|++..+. .+. ++++|+.|+|++|+|++..|..|.++++|++|+|+
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~-~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAE-WTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTT-SSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChh-hhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 36888888752 34588999999999964444 777 99999999999999998778889999999999999
Q ss_pred cccccccCchhhc--cccceeccccccccCCCchhhhccccccccccccccccccCCCC-----CCCccceEeccCCCcc
Q 006884 127 NNYFSGVLPAFRS--LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL-----NLPRLKILNFSNNNLN 199 (627)
Q Consensus 127 ~N~l~~~~~~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-----~~~~L~~L~l~~N~l~ 199 (627)
+|+|+++++..+. .+|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|+|+
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 9999999886443 48999999999999888899999999999999999999754432 5899999999999999
Q ss_pred ccCCCcCCCCC-----CCcccCCCCCCCCCC
Q 006884 200 GSIPDSLQTFP-----NSSFVGNSMLCGLPL 225 (627)
Q Consensus 200 ~~~p~~~~~~~-----~l~~~~n~~l~~~~~ 225 (627)
+..+..+..++ .|...+|++.|+|.+
T Consensus 177 ~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~l 207 (361)
T 2xot_A 177 KLPLTDLQKLPAWVKNGLYLHNNPLECDCKL 207 (361)
T ss_dssp CCCHHHHHHSCHHHHTTEECCSSCEECCHHH
T ss_pred ccCHHHhhhccHhhcceEEecCCCccCCcCc
Confidence 55545566654 356678999998753
No 275
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.72 E-value=2.2e-17 Score=166.43 Aligned_cols=149 Identities=25% Similarity=0.286 Sum_probs=78.1
Q ss_pred cEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc--cccceecc
Q 006884 70 RVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNALDL 147 (627)
Q Consensus 70 ~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~--~~L~~L~l 147 (627)
+++.|+|++|++++ ++. .+.+++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|+++++..+. .+|+.|+|
T Consensus 56 ~L~~L~L~~n~l~~-~~~--~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L 131 (290)
T 1p9a_G 56 RLTQLNLDRAELTK-LQV--DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYL 131 (290)
T ss_dssp TCCEEECTTSCCCE-EEC--CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEEC
T ss_pred CCCEEECCCCccCc-ccC--CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEEC
Confidence 44444444444442 222 244555555555555555 4555555566666666666666655544222 25666666
Q ss_pred ccccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCCCcCCCCCCCcc---cCCCCCCC
Q 006884 148 SFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSF---VGNSMLCG 222 (627)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~---~~n~~l~~ 222 (627)
++|+|++..+..|..+++|+.|+|++|+|++.++.. .+++|+.|+|++|+++ .+|..+..+..|.. .+|++.|+
T Consensus 132 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 132 KGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 666666444444555666666666666665433322 4556666666666665 45555444444333 24555554
Q ss_pred C
Q 006884 223 L 223 (627)
Q Consensus 223 ~ 223 (627)
|
T Consensus 211 c 211 (290)
T 1p9a_G 211 C 211 (290)
T ss_dssp G
T ss_pred C
Confidence 3
No 276
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.72 E-value=9.4e-18 Score=168.73 Aligned_cols=147 Identities=20% Similarity=0.175 Sum_probs=113.5
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCc-CCCCCCCCcCccccccEEeeccccccccCchhhc--ccccee
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNY-LNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNAL 145 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~--~~L~~L 145 (627)
.+++.|+|++|.+++..|. .|..+++|+.|+|++|. ++...|..|..+++|++|+|++|++++.++..+. .+|++|
T Consensus 56 ~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 134 (285)
T 1ozn_A 56 RNLTILWLHSNVLARIDAA-AFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYL 134 (285)
T ss_dssp TTCCEEECCSSCCCEECTT-TTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCEEECCCCccceeCHh-hcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEE
Confidence 5688888888888865555 78888888888888886 7765577788888888888888888887765433 378888
Q ss_pred ccccccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCCCcCCCCCCCcccC
Q 006884 146 DLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 146 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
+|++|++++..+..|..+++|++|+|++|+|++..+.. .+++|+.|++++|++++..|..+..+++|+.++
T Consensus 135 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 207 (285)
T 1ozn_A 135 YLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLY 207 (285)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred ECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEee
Confidence 88888888665666788888888888888888655542 678888888888888877788887777777664
No 277
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.71 E-value=1.2e-17 Score=173.32 Aligned_cols=164 Identities=25% Similarity=0.328 Sum_probs=135.7
Q ss_pred CCCCCCCCCCccceEeeCC-----------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCcc
Q 006884 49 WNAAAPVCSSWIGVTCNVN-----------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSI 117 (627)
Q Consensus 49 W~~~~~~c~~w~gv~C~~~-----------~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 117 (627)
|......| .|.|+ |+.. ..+++.|+|++|++++ +|...|.++++|+.|+|++|.+++..|..|.++
T Consensus 23 ~~~~~~~C-~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 99 (353)
T 2z80_A 23 SNQASLSC-DRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITY-ISNSDLQRCVNLQALVLTSNGINTIEEDSFSSL 99 (353)
T ss_dssp ----CCEE-CTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred CCccCCCC-CCCeE-eeCCCCCcccccccccccCcEEECCCCcCcc-cCHHHhccCCCCCEEECCCCccCccCHhhcCCC
Confidence 43344445 79887 7642 2479999999999995 555479999999999999999998888899999
Q ss_pred ccccEEeeccccccccCchh-hc-cccceeccccccccCCCch--hhhcccccccccccccc-ccccCCCC--CCCccce
Q 006884 118 SSLQYVYLQNNYFSGVLPAF-RS-LQLNALDLSFNAFTGNIPP--GFQNLTRLHLLNLQNNS-ISGAIPPL--NLPRLKI 190 (627)
Q Consensus 118 ~~L~~L~ls~N~l~~~~~~~-~~-~~L~~L~ls~N~l~~~~p~--~~~~l~~L~~L~l~~N~-l~~~~~~~--~~~~L~~ 190 (627)
++|++|+|++|++++.++.. .. .+|++|+|++|++++ +|. .|.++++|++|++++|+ +++..+.. .+++|+.
T Consensus 100 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~ 178 (353)
T 2z80_A 100 GSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEE 178 (353)
T ss_dssp TTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEE
T ss_pred CCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc-cCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCE
Confidence 99999999999999988863 33 489999999999995 554 79999999999999995 66554543 7899999
Q ss_pred EeccCCCccccCCCcCCCCCCCcccC
Q 006884 191 LNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 191 L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
|++++|++++..|..+..+++|+.++
T Consensus 179 L~l~~n~l~~~~~~~l~~l~~L~~L~ 204 (353)
T 2z80_A 179 LEIDASDLQSYEPKSLKSIQNVSHLI 204 (353)
T ss_dssp EEEEETTCCEECTTTTTTCSEEEEEE
T ss_pred EECCCCCcCccCHHHHhccccCCeec
Confidence 99999999999899999999888764
No 278
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.70 E-value=1.5e-17 Score=183.28 Aligned_cols=157 Identities=23% Similarity=0.256 Sum_probs=137.4
Q ss_pred CccceEeeCC-----------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeec
Q 006884 58 SWIGVTCNVN-----------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQ 126 (627)
Q Consensus 58 ~w~gv~C~~~-----------~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls 126 (627)
.|.|+ |+.. ..+++.|+|++|++++..|. .|.++++|+.|+|++|++++..|..|.++++|++|+|+
T Consensus 5 ~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls 82 (549)
T 2z81_A 5 DASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHG-DLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLS 82 (549)
T ss_dssp CTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSS-TTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECT
T ss_pred CCCce-EECCCCccccccccCCCCccEEECcCCccCccChh-hhhcCCcccEEECCCCCcCccChhhccccccCCEEECC
Confidence 79998 8742 24799999999999976666 89999999999999999998888999999999999999
Q ss_pred cccccccCch-hhcc-ccceeccccccccC-CCchhhhccccccccccccccccccCCC-C--CCCccceEeccCCCccc
Q 006884 127 NNYFSGVLPA-FRSL-QLNALDLSFNAFTG-NIPPGFQNLTRLHLLNLQNNSISGAIPP-L--NLPRLKILNFSNNNLNG 200 (627)
Q Consensus 127 ~N~l~~~~~~-~~~~-~L~~L~ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~--~~~~L~~L~l~~N~l~~ 200 (627)
+|++++.+|. +... +|++|+|++|.+++ ..|..|.++++|++|++++|++.+.+|. . .+++|++|++++|.+++
T Consensus 83 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 162 (549)
T 2z81_A 83 DNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRN 162 (549)
T ss_dssp TSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCE
T ss_pred CCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccc
Confidence 9999999987 4443 89999999999996 3678899999999999999996666653 2 89999999999999999
Q ss_pred cCCCcCCCCCCCcccC
Q 006884 201 SIPDSLQTFPNSSFVG 216 (627)
Q Consensus 201 ~~p~~~~~~~~l~~~~ 216 (627)
.+|..+..+++|+.++
T Consensus 163 ~~~~~l~~l~~L~~L~ 178 (549)
T 2z81_A 163 YQSQSLKSIRDIHHLT 178 (549)
T ss_dssp ECTTTTTTCSEEEEEE
T ss_pred cChhhhhccccCceEe
Confidence 9999998888776653
No 279
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.70 E-value=6e-17 Score=162.80 Aligned_cols=148 Identities=24% Similarity=0.227 Sum_probs=129.1
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeecccc-ccccCchhhc--cccce
Q 006884 68 RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNY-FSGVLPAFRS--LQLNA 144 (627)
Q Consensus 68 ~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~-l~~~~~~~~~--~~L~~ 144 (627)
...++.|+|++|++++. ++..|.++++|+.|+|++|.+++..|..|..+++|++|+|++|. +....|..+. .+|++
T Consensus 31 ~~~l~~L~l~~n~i~~~-~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~ 109 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHV-PAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHT 109 (285)
T ss_dssp CTTCSEEECTTSCCCEE-CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCE
T ss_pred CCCceEEEeeCCcCCcc-CHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCE
Confidence 45799999999999964 44489999999999999999998889999999999999999997 8887665433 38999
Q ss_pred eccccccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCCCcCCCCCCCcccC
Q 006884 145 LDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 145 L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
|+|++|.+++..|..|.++++|++|++++|++++..+.. .+++|+.|++++|++++..+..+..+++|+.++
T Consensus 110 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 183 (285)
T 1ozn_A 110 LHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLL 183 (285)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred EECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEE
Confidence 999999999888889999999999999999999766653 799999999999999977667788888888764
No 280
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.70 E-value=8.6e-18 Score=170.85 Aligned_cols=159 Identities=25% Similarity=0.326 Sum_probs=123.5
Q ss_pred CCccceEeeCC---------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCC--CCCCcCccccccEEee
Q 006884 57 SSWIGVTCNVN---------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGT--LPSDITSISSLQYVYL 125 (627)
Q Consensus 57 ~~w~gv~C~~~---------~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~l 125 (627)
|.|.+|.|+.. ..+++.|+|++|+++ .+|...|.++++|+.|+|++|.++.. .|..+..+++|++|+|
T Consensus 7 C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 7 CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC
T ss_pred eCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC
Confidence 48999999852 357999999999998 67776789999999999999999832 3566677888888888
Q ss_pred ccccccccCchhhcc-ccceeccccccccCCCc-hhhhccccccccccccccccccCCCC--CCCccceEeccCCCccc-
Q 006884 126 QNNYFSGVLPAFRSL-QLNALDLSFNAFTGNIP-PGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNG- 200 (627)
Q Consensus 126 s~N~l~~~~~~~~~~-~L~~L~ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~- 200 (627)
++|.+.+.++.+... +|++|+|++|++++..+ ..+..+++|++|++++|++++..+.. .+++|+.|++++|.+++
T Consensus 86 s~n~i~~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 165 (306)
T 2z66_A 86 SFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 165 (306)
T ss_dssp CSCSEEEEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG
T ss_pred CCCccccChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc
Confidence 888888766654443 78888888888885444 46778888888888888887766653 67788888888888876
Q ss_pred cCCCcCCCCCCCcccC
Q 006884 201 SIPDSLQTFPNSSFVG 216 (627)
Q Consensus 201 ~~p~~~~~~~~l~~~~ 216 (627)
.+|..+..+++|+.++
T Consensus 166 ~~~~~~~~l~~L~~L~ 181 (306)
T 2z66_A 166 FLPDIFTELRNLTFLD 181 (306)
T ss_dssp EECSCCTTCTTCCEEE
T ss_pred cchhHHhhCcCCCEEE
Confidence 5677777777777664
No 281
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.69 E-value=7.8e-17 Score=158.83 Aligned_cols=134 Identities=19% Similarity=0.236 Sum_probs=119.4
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc--ccccee
Q 006884 68 RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNAL 145 (627)
Q Consensus 68 ~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~--~~L~~L 145 (627)
..+++.|+|++|.+++..+. .|..+++|+.|+|++|+|++..|..|..+++|++|+|++|+|+++++..+. .+|+.|
T Consensus 58 l~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 136 (251)
T 3m19_A 58 LTKLTWLNLDYNQLQTLSAG-VFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKEL 136 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTT-TTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cccCCEEECCCCcCCccCHh-HhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEE
Confidence 36899999999999975555 899999999999999999977778889999999999999999999887543 489999
Q ss_pred ccccccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccC
Q 006884 146 DLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSI 202 (627)
Q Consensus 146 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~ 202 (627)
+|++|+|++..+..|..+++|+.|+|++|+|++.++.. .+++|+.|+|++|++++..
T Consensus 137 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~ 195 (251)
T 3m19_A 137 RLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSR 195 (251)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTS
T ss_pred ECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCc
Confidence 99999999766768999999999999999999777643 7899999999999998663
No 282
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.69 E-value=1.1e-17 Score=157.72 Aligned_cols=128 Identities=26% Similarity=0.301 Sum_probs=105.5
Q ss_pred EEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCC-CcCccccccEEeeccccccccCchhh-c-cccceeccc
Q 006884 72 IGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPS-DITSISSLQYVYLQNNYFSGVLPAFR-S-LQLNALDLS 148 (627)
Q Consensus 72 ~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~ls~N~l~~~~~~~~-~-~~L~~L~ls 148 (627)
+.|++++|+++ .+|. .+.. +|+.|+|++|+|++..|. .|..+++|++|+|++|+|+++.|..+ . .+|++|+|+
T Consensus 11 ~~l~~s~~~l~-~ip~-~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPR-DIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TEEECTTSCCS-SCCS-CCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CEEEcCCCCcC-cCcc-CCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 45777888885 7777 3433 889999999999866554 48899999999999999999877543 3 379999999
Q ss_pred cccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCC
Q 006884 149 FNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIP 203 (627)
Q Consensus 149 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p 203 (627)
+|+|++..|..|.++++|++|+|++|+|++.+|.. .+++|++|+|++|++++..+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 99999877778999999999999999999887764 78899999999999987655
No 283
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.69 E-value=1.1e-16 Score=160.02 Aligned_cols=154 Identities=21% Similarity=0.245 Sum_probs=75.0
Q ss_pred cEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeecccccccc-Cch-hhc-cccceec
Q 006884 70 RVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGV-LPA-FRS-LQLNALD 146 (627)
Q Consensus 70 ~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~-~~~-~~~-~~L~~L~ 146 (627)
+++.|+|++|.+++..+. .|.++++|+.|+|++|.+++..+..+..+++|++|+|++|++++. +|. +.. .+|+.|+
T Consensus 77 ~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~ 155 (276)
T 2z62_A 77 HLSTLILTGNPIQSLALG-AFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLD 155 (276)
T ss_dssp TCCEEECTTCCCCEECTT-TTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEE
T ss_pred CCCEEECCCCccCccChh-hhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEE
Confidence 344444444444432222 344444444444444444433333444444444444444444442 122 222 2444555
Q ss_pred cccccccCCCchhhhcccccc----ccccccccccccCCCC-CCCccceEeccCCCccccCCCcCCCCCCCccc---CCC
Q 006884 147 LSFNAFTGNIPPGFQNLTRLH----LLNLQNNSISGAIPPL-NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV---GNS 218 (627)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~----~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~---~n~ 218 (627)
|++|++++..+..|..+++|+ .|++++|++++..+.. ...+|+.|++++|++++..+..+..+++|+.+ +|+
T Consensus 156 Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 235 (276)
T 2z62_A 156 LSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNP 235 (276)
T ss_dssp CCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSC
T ss_pred CCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCc
Confidence 555554443344444444444 4444555554433332 34477888888888875555556666665543 566
Q ss_pred CCCCCC
Q 006884 219 MLCGLP 224 (627)
Q Consensus 219 ~l~~~~ 224 (627)
..|+++
T Consensus 236 ~~c~c~ 241 (276)
T 2z62_A 236 WDCSCP 241 (276)
T ss_dssp BCCCTT
T ss_pred ccccCC
Confidence 666553
No 284
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.69 E-value=2.8e-16 Score=150.11 Aligned_cols=149 Identities=23% Similarity=0.295 Sum_probs=124.5
Q ss_pred EEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc--cccceecccc
Q 006884 72 IGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNALDLSF 149 (627)
Q Consensus 72 ~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~--~~L~~L~ls~ 149 (627)
+.+++++++++ .+|. .+ .++|+.|+|++|++++..+..|..+++|++|+|++|+++++++..+. .+|++|+|++
T Consensus 10 ~~v~c~~~~l~-~~p~-~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPT-GI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp TEEECCSSCCS-SCCS-CC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEecCCCcc-CCCC-CC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 46888999988 5665 23 56899999999999977777789999999999999999998886543 4899999999
Q ss_pred ccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCCCcCCCCCCCccc---CCCCCCCCC
Q 006884 150 NAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV---GNSMLCGLP 224 (627)
Q Consensus 150 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~---~n~~l~~~~ 224 (627)
|+|++..+..|.++++|++|+|++|+|++..+.. .+++|+.|++++|++++..+..+..+++|+.+ +|+..|.++
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC
Confidence 9999766677899999999999999999776653 79999999999999997766667877777665 566666543
No 285
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.68 E-value=4.6e-17 Score=165.41 Aligned_cols=145 Identities=19% Similarity=0.255 Sum_probs=87.4
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCC-CCcCccccccEEeeccccccccCchhhc--ccccee
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLP-SDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNAL 145 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~~~~~~--~~L~~L 145 (627)
.+++.|+|++|++. .+|. .+..+++|+.|+|++|.+++..+ ..+..+++|++|+|++|.+.+.++..+. .+|++|
T Consensus 78 ~~L~~L~Ls~n~i~-~l~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 155 (306)
T 2z66_A 78 TSLKYLDLSFNGVI-TMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 155 (306)
T ss_dssp SCCCEEECCSCSEE-EEEE-EEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEE
T ss_pred cccCEEECCCCccc-cChh-hcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEE
Confidence 45667777777666 3554 46666666666666666664433 3566666666666666666666554322 256666
Q ss_pred ccccccccC-CCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCCCcCCCCCCCccc
Q 006884 146 DLSFNAFTG-NIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV 215 (627)
Q Consensus 146 ~ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~ 215 (627)
+|++|.+++ .+|..|..+++|++|+|++|++++..|.. .+++|+.|++++|++++..+..+..+++|+.+
T Consensus 156 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 228 (306)
T 2z66_A 156 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVL 228 (306)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEE
T ss_pred ECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEe
Confidence 666666664 35556666666666666666666554432 55666666666666665444455555555544
No 286
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.68 E-value=1.4e-16 Score=158.91 Aligned_cols=136 Identities=23% Similarity=0.283 Sum_probs=120.6
Q ss_pred CCCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc--cccce
Q 006884 67 NRSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNA 144 (627)
Q Consensus 67 ~~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~--~~L~~ 144 (627)
...+++.|+|++|++++..+. .|.++++|+.|+|++|++++..|..|..+++|++|+|++|++++.++..+. .+|+.
T Consensus 83 ~l~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 161 (272)
T 3rfs_A 83 ELTNLTYLILTGNQLQSLPNG-VFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTE 161 (272)
T ss_dssp TCTTCCEEECTTSCCCCCCTT-TTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred CCCCCCEEECCCCccCccChh-HhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCE
Confidence 346899999999999955444 799999999999999999987777899999999999999999999887543 48999
Q ss_pred eccccccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCC
Q 006884 145 LDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIP 203 (627)
Q Consensus 145 L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p 203 (627)
|+|++|+|++..|..|..+++|+.|+|++|+|++.++.. .+++|+.|++++|++.+..|
T Consensus 162 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 162 LDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred EECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 999999999877778899999999999999999877753 79999999999999987655
No 287
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.68 E-value=8.9e-17 Score=161.89 Aligned_cols=145 Identities=24% Similarity=0.230 Sum_probs=123.2
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc-cccceecc
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALDL 147 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~-~~L~~L~l 147 (627)
..++.|+|++|++++..+. .|..+++|+.|+|++|.|++ +|.. +.+++|++|+|++|+++.++..+.. .+|+.|+|
T Consensus 31 ~~l~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~l 107 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLA-TLMPYTRLTQLNLDRAELTK-LQVD-GTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDV 107 (290)
T ss_dssp TTCCEEECTTSCCSEEEGG-GGTTCTTCCEEECTTSCCCE-EECC-SCCTTCCEEECCSSCCSSCCCCTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCcCCccCHH-HhhcCCCCCEEECCCCccCc-ccCC-CCCCcCCEEECCCCcCCcCchhhccCCCCCEEEC
Confidence 5789999999999866555 89999999999999999995 4443 7899999999999999977665544 38999999
Q ss_pred ccccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCCCcCCCCCCCcccC
Q 006884 148 SFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
++|+|++..|..|.++++|++|+|++|+|++.++.. .+++|+.|+|++|+|++..+..+..+++|+.++
T Consensus 108 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~ 178 (290)
T 1p9a_G 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLL 178 (290)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEE
T ss_pred CCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEE
Confidence 999999777788999999999999999999766654 789999999999999965556678888887765
No 288
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.68 E-value=9.6e-17 Score=171.82 Aligned_cols=156 Identities=24% Similarity=0.271 Sum_probs=115.1
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcC-------------------------ccccccE
Q 006884 68 RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDIT-------------------------SISSLQY 122 (627)
Q Consensus 68 ~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-------------------------~l~~L~~ 122 (627)
-.+++.|+|++|+++ .+|...|..+++|+.|+|++|.|++..+..|. ++++|++
T Consensus 111 l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~ 189 (440)
T 3zyj_A 111 LANLNTLELFDNRLT-TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRY 189 (440)
T ss_dssp CSSCCEEECCSSCCS-SCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCE
T ss_pred CccCCEEECCCCcCC-eeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCe
Confidence 357888888888888 45554788888888888888887754443444 4555555
Q ss_pred EeeccccccccCchhhc-cccceeccccccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCcc
Q 006884 123 VYLQNNYFSGVLPAFRS-LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLN 199 (627)
Q Consensus 123 L~ls~N~l~~~~~~~~~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~ 199 (627)
|+|++|+++.++ .+.. .+|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|+++
T Consensus 190 L~L~~n~l~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 268 (440)
T 3zyj_A 190 LNLAMCNLREIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT 268 (440)
T ss_dssp EECTTSCCSSCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCC
T ss_pred ecCCCCcCcccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCC
Confidence 555555555443 2222 36888888888888777888888999999999999998776654 7899999999999999
Q ss_pred ccCCCcCCCCCCCcc---cCCCCCCCCCC
Q 006884 200 GSIPDSLQTFPNSSF---VGNSMLCGLPL 225 (627)
Q Consensus 200 ~~~p~~~~~~~~l~~---~~n~~l~~~~~ 225 (627)
+..+..+..+++|+. .+|++.|+|.+
T Consensus 269 ~~~~~~~~~l~~L~~L~L~~Np~~CdC~l 297 (440)
T 3zyj_A 269 LLPHDLFTPLHHLERIHLHHNPWNCNCDI 297 (440)
T ss_dssp CCCTTTTSSCTTCCEEECCSSCEECSSTT
T ss_pred ccChhHhccccCCCEEEcCCCCccCCCCc
Confidence 777777777776654 47888898764
No 289
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.68 E-value=1.1e-16 Score=172.04 Aligned_cols=156 Identities=22% Similarity=0.241 Sum_probs=121.0
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCC-------------------------cCccccccE
Q 006884 68 RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSD-------------------------ITSISSLQY 122 (627)
Q Consensus 68 ~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~-------------------------~~~l~~L~~ 122 (627)
..+++.|+|++|+++ .+|...|..+++|+.|+|++|.|++..+.. |.++++|++
T Consensus 122 l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~ 200 (452)
T 3zyi_A 122 LASLNTLELFDNWLT-VIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKY 200 (452)
T ss_dssp CTTCCEEECCSSCCS-BCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCE
T ss_pred cccCCEEECCCCcCC-ccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCE
Confidence 357888999998888 455547888888888888888887444433 445566666
Q ss_pred EeeccccccccCchhhc-cccceeccccccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCcc
Q 006884 123 VYLQNNYFSGVLPAFRS-LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLN 199 (627)
Q Consensus 123 L~ls~N~l~~~~~~~~~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~ 199 (627)
|+|++|++++.+ .+.. .+|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|+|+
T Consensus 201 L~L~~n~l~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 279 (452)
T 3zyi_A 201 LNLGMCNIKDMP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLS 279 (452)
T ss_dssp EECTTSCCSSCC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred EECCCCcccccc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCC
Confidence 666666666653 3333 37899999999999888889999999999999999999877754 7899999999999999
Q ss_pred ccCCCcCCCCCCCcc---cCCCCCCCCCC
Q 006884 200 GSIPDSLQTFPNSSF---VGNSMLCGLPL 225 (627)
Q Consensus 200 ~~~p~~~~~~~~l~~---~~n~~l~~~~~ 225 (627)
+..+..+..+++|+. .+|++.|+|.+
T Consensus 280 ~~~~~~~~~l~~L~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 280 SLPHDLFTPLRYLVELHLHHNPWNCDCDI 308 (452)
T ss_dssp CCCTTSSTTCTTCCEEECCSSCEECSTTT
T ss_pred ccChHHhccccCCCEEEccCCCcCCCCCc
Confidence 777777777776654 47899998764
No 290
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.67 E-value=4.9e-17 Score=176.01 Aligned_cols=158 Identities=18% Similarity=0.163 Sum_probs=135.7
Q ss_pred CccceEeeCC---------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccc
Q 006884 58 SWIGVTCNVN---------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNN 128 (627)
Q Consensus 58 ~w~gv~C~~~---------~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 128 (627)
.|..|.|... +..++.|+|++|++++..+. .|.++++|+.|+|++|.+++..|..|.++++|++|+|++|
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQD-EFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTT-TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHh-HccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 4778888742 35789999999999965555 8999999999999999999888999999999999999999
Q ss_pred cccccCchhh-c-cccceeccccccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCCC
Q 006884 129 YFSGVLPAFR-S-LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPD 204 (627)
Q Consensus 129 ~l~~~~~~~~-~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~ 204 (627)
+++++++..+ . .+|++|+|++|++++..|..|..+++|+.|+|++|++++..+.. .+++|+.|++++|++++..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 9999888643 3 48999999999999888889999999999999999999877654 889999999999999866556
Q ss_pred cCCCCCCCcccC
Q 006884 205 SLQTFPNSSFVG 216 (627)
Q Consensus 205 ~~~~~~~l~~~~ 216 (627)
.+.++++|..++
T Consensus 171 ~l~~l~~L~~L~ 182 (477)
T 2id5_A 171 ALSHLHGLIVLR 182 (477)
T ss_dssp HHTTCTTCCEEE
T ss_pred HhcccCCCcEEe
Confidence 677777776653
No 291
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.67 E-value=8.5e-17 Score=186.27 Aligned_cols=85 Identities=27% Similarity=0.333 Sum_probs=57.2
Q ss_pred ccceeccccccccCCCchhhhccccccccccccccccccCCCCCCCccceEeccCCCccccCCCcCCCCCCCcccCCCCC
Q 006884 141 QLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVGNSML 220 (627)
Q Consensus 141 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~n~~l 220 (627)
+|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++....++|+.|+|++|+|++.+|..+.++..+.+.+|++.
T Consensus 481 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~ 560 (844)
T 3j0a_A 481 HLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFI 560 (844)
T ss_dssp CEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCC
T ss_pred cccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCChhHhCCcCEEEecCCCcc
Confidence 35555555555555555556666666666666666665444443366777777777777777777777888888899999
Q ss_pred CCCCC
Q 006884 221 CGLPL 225 (627)
Q Consensus 221 ~~~~~ 225 (627)
|+|++
T Consensus 561 C~c~~ 565 (844)
T 3j0a_A 561 CECEL 565 (844)
T ss_dssp CSSSC
T ss_pred ccccc
Confidence 98865
No 292
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.66 E-value=9.1e-17 Score=172.72 Aligned_cols=155 Identities=22% Similarity=0.272 Sum_probs=130.0
Q ss_pred CcEEEEEcCCCCcccccCccccC---------------------------------------CCCcccEEEccCCcCCCC
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIG---------------------------------------KLDALKILSLRSNYLNGT 109 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~---------------------------------------~l~~L~~L~L~~N~l~~~ 109 (627)
.+++.|+|++|++++.+|. .+. ..++|+.|+|++|.+++.
T Consensus 212 ~~L~~L~Ls~n~l~~~~~~-~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 290 (455)
T 3v47_A 212 TSITTLDLSGNGFKESMAK-RFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFAL 290 (455)
T ss_dssp CEEEEEECTTSCCCHHHHH-HHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEE
T ss_pred ceeeeEecCCCcccccchh-hhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCcccccc
Confidence 5788999999988765543 221 126899999999999988
Q ss_pred CCCCcCccccccEEeeccccccccCchhh-c-cccceeccccccccCCCchhhhccccccccccccccccccCCCC--CC
Q 006884 110 LPSDITSISSLQYVYLQNNYFSGVLPAFR-S-LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NL 185 (627)
Q Consensus 110 ~p~~~~~l~~L~~L~ls~N~l~~~~~~~~-~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~ 185 (627)
.|..|..+++|++|+|++|++++.+|..+ . .+|+.|+|++|++++..|..|.++++|++|+|++|++++..|.. .+
T Consensus 291 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 370 (455)
T 3v47_A 291 LKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGL 370 (455)
T ss_dssp CTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred chhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhcccc
Confidence 99999999999999999999999988544 3 48999999999999888899999999999999999999887754 89
Q ss_pred CccceEeccCCCccccCCCcCCCCCCCccc---CCCCCCCCC
Q 006884 186 PRLKILNFSNNNLNGSIPDSLQTFPNSSFV---GNSMLCGLP 224 (627)
Q Consensus 186 ~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~---~n~~l~~~~ 224 (627)
++|++|++++|++++..+..+..+++|+.+ +|+..|+++
T Consensus 371 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 371 PNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 999999999999997666667777777655 677777765
No 293
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.66 E-value=1.7e-16 Score=149.51 Aligned_cols=153 Identities=20% Similarity=0.238 Sum_probs=118.7
Q ss_pred CCccceEeeCC---------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeecc
Q 006884 57 SSWIGVTCNVN---------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQN 127 (627)
Q Consensus 57 ~~w~gv~C~~~---------~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~ 127 (627)
|.|..+.|+.. ...++.|+|++|++++..+...|+.+++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 8 C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 37888888752 237899999999998655544589999999999999999988899999999999999999
Q ss_pred ccccccCchhh-c-cccceeccccccccCCCchhhhccccccccccccccccccCCCCCCC-ccceEeccCCCccccCCC
Q 006884 128 NYFSGVLPAFR-S-LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLP-RLKILNFSNNNLNGSIPD 204 (627)
Q Consensus 128 N~l~~~~~~~~-~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-~L~~L~l~~N~l~~~~p~ 204 (627)
|+|++.++..+ . .+|++|+|++|+|++..|..|..+++|++|+|++|.+++..+...+. .|+...+..+......|.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~ 167 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPS 167 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSST
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCCh
Confidence 99999988643 3 48999999999999888999999999999999999998765532111 123333444444445555
Q ss_pred cCCCC
Q 006884 205 SLQTF 209 (627)
Q Consensus 205 ~~~~~ 209 (627)
.+...
T Consensus 168 ~l~~~ 172 (192)
T 1w8a_A 168 KVRDV 172 (192)
T ss_dssp TTTTS
T ss_pred HHcCC
Confidence 55444
No 294
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.66 E-value=5.1e-17 Score=182.00 Aligned_cols=145 Identities=18% Similarity=0.154 Sum_probs=125.8
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhh-c-ccccee
Q 006884 68 RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFR-S-LQLNAL 145 (627)
Q Consensus 68 ~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~-~-~~L~~L 145 (627)
+..++.|||++|+|+ .+|+..|.++++|+.|||++|+|++..|..|.+|++|++|+|++|+|+++++..+ . .+|++|
T Consensus 51 p~~~~~LdLs~N~i~-~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L 129 (635)
T 4g8a_A 51 PFSTKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKL 129 (635)
T ss_dssp CTTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEE
T ss_pred CcCCCEEEeeCCCCC-CCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEE
Confidence 357999999999999 5665589999999999999999997778889999999999999999999988644 3 389999
Q ss_pred ccccccccCCCchhhhcccccccccccccccccc-CCCC--CCCccceEeccCCCccccCCCcCCCCCCCc
Q 006884 146 DLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGA-IPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSS 213 (627)
Q Consensus 146 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~ 213 (627)
+|++|+|++..+..|+++++|++|+|++|+|++. +|.. .+++|++|++++|++++..|..+..+.++.
T Consensus 130 ~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~ 200 (635)
T 4g8a_A 130 VAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMP 200 (635)
T ss_dssp ECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCT
T ss_pred ECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhh
Confidence 9999999976667899999999999999999864 3443 789999999999999988888776665544
No 295
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=1.5e-16 Score=146.58 Aligned_cols=134 Identities=24% Similarity=0.228 Sum_probs=115.8
Q ss_pred CCcEEEEEcCCCCcc-cccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc--cccce
Q 006884 68 RSRVIGIHLPGIGFT-GPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNA 144 (627)
Q Consensus 68 ~~~v~~L~l~~~~l~-~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~--~~L~~ 144 (627)
..+++.|+|++|+++ +.+|. .+..+++|+.|+|++|.|++. ..+..+++|++|+|++|++++.+|.... .+|+.
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~-~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEG-LTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSS-CCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred cccCCEEECCCCCCChhhHHH-HHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 367999999999998 78888 689999999999999999965 7899999999999999999997776554 48999
Q ss_pred eccccccccCCC-chhhhccccccccccccccccccCC----C-CCCCccceEeccCCCccccCCCc
Q 006884 145 LDLSFNAFTGNI-PPGFQNLTRLHLLNLQNNSISGAIP----P-LNLPRLKILNFSNNNLNGSIPDS 205 (627)
Q Consensus 145 L~ls~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~~----~-~~~~~L~~L~l~~N~l~~~~p~~ 205 (627)
|+|++|+|++.. +..+..+++|+.|++++|++++..+ . ..+++|++|++++|.+. .+|+.
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~~ 165 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPDS 165 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCSS
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hcccc
Confidence 999999999632 2789999999999999999997665 2 28999999999999987 55543
No 296
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.66 E-value=1.6e-16 Score=170.72 Aligned_cols=157 Identities=18% Similarity=0.182 Sum_probs=112.0
Q ss_pred CccceEeeCC---------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccc
Q 006884 58 SWIGVTCNVN---------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNN 128 (627)
Q Consensus 58 ~w~gv~C~~~---------~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 128 (627)
.|..|.|... +.+++.|+|++|++++..|. .|.++++|+.|+|++|.|++..|..|.++++|++|+|++|
T Consensus 55 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~-~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 55 QFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQAD-TFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp SSCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTT-TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHH-HcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 3678888752 35799999999999976565 8999999999999999999888889999999999999999
Q ss_pred cccccCchhhc--cccceeccccccccCCCchhhhcccccccccccc-------------------------ccccccCC
Q 006884 129 YFSGVLPAFRS--LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQN-------------------------NSISGAIP 181 (627)
Q Consensus 129 ~l~~~~~~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~-------------------------N~l~~~~~ 181 (627)
+++++++..+. .+|++|+|++|+|++..+..|.++++|+.|+|++ |+|++...
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~ 213 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPN 213 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCCC
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccccc
Confidence 99988886443 3799999999988854444555555555555554 44443211
Q ss_pred CCCCCccceEeccCCCccccCCCcCCCCCCCccc
Q 006884 182 PLNLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV 215 (627)
Q Consensus 182 ~~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~ 215 (627)
...+++|+.|+|++|++++..|..|.++++|+.+
T Consensus 214 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 247 (452)
T 3zyi_A 214 LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKL 247 (452)
T ss_dssp CTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEE
T ss_pred ccccccccEEECcCCcCcccCcccccCccCCCEE
Confidence 1244555555555555555555555555555443
No 297
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.66 E-value=7.4e-17 Score=169.85 Aligned_cols=165 Identities=16% Similarity=0.156 Sum_probs=126.6
Q ss_pred CCCCCCCCCCCCccceEeeCC-------------------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCC
Q 006884 47 LNWNAAAPVCSSWIGVTCNVN-------------------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLN 107 (627)
Q Consensus 47 ~~W~~~~~~c~~w~gv~C~~~-------------------~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~ 107 (627)
.+|....+||+.|.+..|... -.+++.|++++|.++ .+|...|..+++|+.|+|++|.++
T Consensus 4 ~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~ 82 (390)
T 3o6n_A 4 KPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIE 82 (390)
T ss_dssp ---CCEECBCC------EEEESCEECSSCCCCEESCSSGGGCCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCC
T ss_pred CCCCCccceehhhhhhccceeeeeeecccccccccccccccCCceEEEecCCchh-hCChhHhcccccCcEEECCCCccc
Confidence 367766667766655555310 156888999999987 677767899999999999999999
Q ss_pred CCCCCCcCccccccEEeeccccccccCchhh-c-cccceeccccccccCCCchhhhccccccccccccccccccCCCC--
Q 006884 108 GTLPSDITSISSLQYVYLQNNYFSGVLPAFR-S-LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL-- 183 (627)
Q Consensus 108 ~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~-~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-- 183 (627)
+..|..|..+++|++|+|++|++++.+|..+ . .+|++|+|++|+++...+..|.++++|++|++++|++++..+..
T Consensus 83 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 162 (390)
T 3o6n_A 83 EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQ 162 (390)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTS
T ss_pred ccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhcc
Confidence 7777899999999999999999999988754 3 38999999999999544445789999999999999999877753
Q ss_pred CCCccceEeccCCCccccCCCcCCCCCCCccc
Q 006884 184 NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV 215 (627)
Q Consensus 184 ~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~ 215 (627)
.+++|+.|++++|++++.. +..+++|..+
T Consensus 163 ~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L 191 (390)
T 3o6n_A 163 ATTSLQNLQLSSNRLTHVD---LSLIPSLFHA 191 (390)
T ss_dssp SCTTCCEEECCSSCCSBCC---GGGCTTCSEE
T ss_pred CCCCCCEEECCCCcCCccc---ccccccccee
Confidence 8899999999999998653 3344444443
No 298
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.66 E-value=9.4e-17 Score=178.67 Aligned_cols=165 Identities=16% Similarity=0.141 Sum_probs=130.9
Q ss_pred CCCCCCCCCCCC---ccceEeeC----------------CCCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCC
Q 006884 47 LNWNAAAPVCSS---WIGVTCNV----------------NRSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLN 107 (627)
Q Consensus 47 ~~W~~~~~~c~~---w~gv~C~~----------------~~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~ 107 (627)
.+|.....||.. |.++.|+. .-.+++.|++++|.+. .+|+..|.++++|+.|+|++|.|+
T Consensus 10 ~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~-~lp~~~~~~l~~L~~L~L~~n~l~ 88 (597)
T 3oja_B 10 KPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIE 88 (597)
T ss_dssp -CCCSEECCCCC--CCSEEECSCEECSSCCCCEESCSSGGGCCCSEEEESSCEES-EECTHHHHHCCCCSEEECTTSCCC
T ss_pred cCCCCCCcCcccCcCceeEecCceecccccccccCcccccCCCceEEEeeCCCCC-CcCHHHHccCCCCcEEECCCCCCC
Confidence 468766555543 55555541 0145688899998887 577767899999999999999999
Q ss_pred CCCCCCcCccccccEEeeccccccccCchhhc--cccceeccccccccCCCchhhhccccccccccccccccccCCCC--
Q 006884 108 GTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL-- 183 (627)
Q Consensus 108 ~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-- 183 (627)
+..|..|+.+++|++|+|++|.+++.+|..+. .+|++|+|++|.|++..+..|.++++|++|+|++|+|++.+|..
T Consensus 89 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 168 (597)
T 3oja_B 89 EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQ 168 (597)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTT
T ss_pred CCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhh
Confidence 88888999999999999999999999887543 38999999999999655556799999999999999999887753
Q ss_pred CCCccceEeccCCCccccCCCcCCCCCCC
Q 006884 184 NLPRLKILNFSNNNLNGSIPDSLQTFPNS 212 (627)
Q Consensus 184 ~~~~L~~L~l~~N~l~~~~p~~~~~~~~l 212 (627)
.+++|+.|++++|.+++..+..+.++..|
T Consensus 169 ~l~~L~~L~L~~N~l~~~~~~~l~~L~~L 197 (597)
T 3oja_B 169 ATTSLQNLQLSSNRLTHVDLSLIPSLFHA 197 (597)
T ss_dssp TCTTCCEEECTTSCCSBCCGGGCTTCSEE
T ss_pred cCCcCcEEECcCCCCCCcChhhhhhhhhh
Confidence 89999999999999997644444444433
No 299
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.65 E-value=1.1e-16 Score=172.21 Aligned_cols=151 Identities=24% Similarity=0.334 Sum_probs=130.7
Q ss_pred Cccc--eEeeCC--------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCC-CCCcCccccccEEeec
Q 006884 58 SWIG--VTCNVN--------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTL-PSDITSISSLQYVYLQ 126 (627)
Q Consensus 58 ~w~g--v~C~~~--------~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~ls 126 (627)
.|.+ |.|+.. +.+++.|+|++|++++..|. .|.++++|+.|+|++|.+.+.+ |..|.++++|++|+|+
T Consensus 9 ~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls 87 (455)
T 3v47_A 9 SVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNET-SFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLD 87 (455)
T ss_dssp EEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTT-TTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECT
T ss_pred EEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChh-HhccCccccEEECcCCcccceECcccccccccCCEEeCC
Confidence 4544 778653 25799999999999976666 8999999999999999998666 5679999999999999
Q ss_pred cccccccCchhhc--cccceeccccccccCCCchh--hhccccccccccccccccccCCCC---CCCccceEeccCCCcc
Q 006884 127 NNYFSGVLPAFRS--LQLNALDLSFNAFTGNIPPG--FQNLTRLHLLNLQNNSISGAIPPL---NLPRLKILNFSNNNLN 199 (627)
Q Consensus 127 ~N~l~~~~~~~~~--~~L~~L~ls~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~~~~~---~~~~L~~L~l~~N~l~ 199 (627)
+|++++..|..+. .+|++|+|++|++++.+|.. |..+++|++|+|++|++++..|.. .+++|++|++++|+++
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~ 167 (455)
T 3v47_A 88 YNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVK 167 (455)
T ss_dssp TCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBS
T ss_pred CCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCccc
Confidence 9999999776443 38999999999999866665 999999999999999999887753 7999999999999999
Q ss_pred ccCCCcCCCC
Q 006884 200 GSIPDSLQTF 209 (627)
Q Consensus 200 ~~~p~~~~~~ 209 (627)
+..|..+..+
T Consensus 168 ~~~~~~l~~l 177 (455)
T 3v47_A 168 SICEEDLLNF 177 (455)
T ss_dssp CCCTTTSGGG
T ss_pred ccChhhhhcc
Confidence 9989888776
No 300
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.65 E-value=1.1e-16 Score=156.37 Aligned_cols=163 Identities=13% Similarity=0.150 Sum_probs=124.7
Q ss_pred CCCCCCCCCCccceE--eeC------CCCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCc-CCCCCCCCcCcccc
Q 006884 49 WNAAAPVCSSWIGVT--CNV------NRSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNY-LNGTLPSDITSISS 119 (627)
Q Consensus 49 W~~~~~~c~~w~gv~--C~~------~~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~ 119 (627)
|.+....|..|.++. |.. -+..++.|+|++|++++ +|+..|.++++|+.|+|++|. +++..+..|.++++
T Consensus 3 ~cp~~C~C~~~~~~~v~c~~l~~ip~~~~~l~~L~l~~n~l~~-i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~ 81 (239)
T 2xwt_C 3 CSSPPCECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRT-IPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSK 81 (239)
T ss_dssp CCSSSCSEEECSTTEEEECSCSSCCCCCTTCCEEEEESCCCSE-ECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTT
T ss_pred CCCCCCeeCCCCcceeEccCccccCCCCCcccEEEEeCCcceE-ECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcC
Confidence 333333443345544 854 23579999999999995 554489999999999999997 88666668999999
Q ss_pred ccEEeecc-ccccccCchhh-c-cccceeccccccccCCCchhhhcccccc---ccccccc-cccccCCCC--CCCccc-
Q 006884 120 LQYVYLQN-NYFSGVLPAFR-S-LQLNALDLSFNAFTGNIPPGFQNLTRLH---LLNLQNN-SISGAIPPL--NLPRLK- 189 (627)
Q Consensus 120 L~~L~ls~-N~l~~~~~~~~-~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~---~L~l~~N-~l~~~~~~~--~~~~L~- 189 (627)
|++|+|++ |+++++++..+ . .+|+.|+|++|++++ +|. |..+++|+ .|++++| ++++..+.. .+++|+
T Consensus 82 L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~ 159 (239)
T 2xwt_C 82 VTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETL 159 (239)
T ss_dssp CCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEE
T ss_pred CcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhccee
Confidence 99999998 99999887643 3 389999999999996 776 88888888 9999999 888766543 788999
Q ss_pred eEeccCCCccccCCCcCCCCCCCccc
Q 006884 190 ILNFSNNNLNGSIPDSLQTFPNSSFV 215 (627)
Q Consensus 190 ~L~l~~N~l~~~~p~~~~~~~~l~~~ 215 (627)
.|++++|+++ .+|......++|+.+
T Consensus 160 ~L~l~~n~l~-~i~~~~~~~~~L~~L 184 (239)
T 2xwt_C 160 TLKLYNNGFT-SVQGYAFNGTKLDAV 184 (239)
T ss_dssp EEECCSCCCC-EECTTTTTTCEEEEE
T ss_pred EEEcCCCCCc-ccCHhhcCCCCCCEE
Confidence 9999999998 666543333555554
No 301
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.65 E-value=3.7e-16 Score=160.73 Aligned_cols=144 Identities=19% Similarity=0.257 Sum_probs=118.5
Q ss_pred CCccceEeeCC---------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeecc
Q 006884 57 SSWIGVTCNVN---------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQN 127 (627)
Q Consensus 57 ~~w~gv~C~~~---------~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~ 127 (627)
|.|..+.|... ..+++.|+|++|++++..|. .|.++++|+.|+|++|.+++..|..|.++++|++|+|++
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKD-DFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTT-TTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHh-HhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 47999999752 24799999999999955554 899999999999999999988899999999999999999
Q ss_pred ccccccCchhhccccceeccccccccCCCchhhhccccccccccccccccc--cCCCC--CCCccceEeccCCCccccCC
Q 006884 128 NYFSGVLPAFRSLQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISG--AIPPL--NLPRLKILNFSNNNLNGSIP 203 (627)
Q Consensus 128 N~l~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~~~~--~~~~L~~L~l~~N~l~~~~p 203 (627)
|+++.+++... .+|++|++++|++++..+..|.++++|+.|++++|+++. ..+.. .+ +|+.|++++|++++ +|
T Consensus 112 n~l~~l~~~~~-~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~ 188 (332)
T 2ft3_A 112 NHLVEIPPNLP-SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IP 188 (332)
T ss_dssp SCCCSCCSSCC-TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CC
T ss_pred CcCCccCcccc-ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cC
Confidence 99997766554 689999999999997666679999999999999999963 33432 33 67777777777764 44
Q ss_pred C
Q 006884 204 D 204 (627)
Q Consensus 204 ~ 204 (627)
.
T Consensus 189 ~ 189 (332)
T 2ft3_A 189 K 189 (332)
T ss_dssp S
T ss_pred c
Confidence 3
No 302
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.65 E-value=1.2e-16 Score=178.45 Aligned_cols=138 Identities=21% Similarity=0.200 Sum_probs=65.1
Q ss_pred EEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccc-cCchh-hc-cccceecc
Q 006884 71 VIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSG-VLPAF-RS-LQLNALDL 147 (627)
Q Consensus 71 v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~-~~~~~-~~-~~L~~L~l 147 (627)
++.|+|++|.+.+..|...+..+++|+.|+|++|.+++..|..+..+++|++|+|++|++++ .+|.. .. .+|+.|+|
T Consensus 401 L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L 480 (606)
T 3vq2_A 401 LQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDL 480 (606)
T ss_dssp CCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEEC
T ss_pred CCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEEC
Confidence 44444444444433332234444455555555555444444445555555555555555544 22322 11 24555555
Q ss_pred ccccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCCCcCCCC
Q 006884 148 SFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTF 209 (627)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~ 209 (627)
++|++++..|..|.++++|+.|+|++|++++.+|.. .+++|+.|++++|+++ .+|..+..+
T Consensus 481 s~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l 543 (606)
T 3vq2_A 481 SKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHF 543 (606)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGS
T ss_pred CCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhh
Confidence 555555444455555555555555555555444432 4555555555555555 344434433
No 303
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.63 E-value=8.2e-17 Score=174.33 Aligned_cols=147 Identities=21% Similarity=0.200 Sum_probs=103.5
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc---ccccee
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS---LQLNAL 145 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~---~~L~~L 145 (627)
..++.|+|++|.+++..+ ..+++|+.|+|++|.|++..|..|+.+++|++|+|++|.+++.+|..+. .+|+.|
T Consensus 99 ~~L~~L~L~~N~l~~~~~----~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L 174 (487)
T 3oja_A 99 PSIETLHAANNNISRVSC----SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHL 174 (487)
T ss_dssp TTCCEEECCSSCCCCEEE----CCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEE
T ss_pred CCcCEEECcCCcCCCCCc----cccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEE
Confidence 567777777777775433 2457788888888888877777788888888888888888877664332 378888
Q ss_pred ccccccccCCCchhhhccccccccccccccccccCCCC-CCCccceEeccCCCccccCCCcCCCCCCCccc---CCCCCC
Q 006884 146 DLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL-NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV---GNSMLC 221 (627)
Q Consensus 146 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~---~n~~l~ 221 (627)
+|++|.|++. |. +..+++|+.|+|++|+|++.+|.. .+++|+.|+|++|.|++ +|..+..+++|..+ +|+..|
T Consensus 175 ~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c 251 (487)
T 3oja_A 175 NLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHC 251 (487)
T ss_dssp ECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCH
T ss_pred ecCCCccccc-cc-cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcC
Confidence 8888888754 33 335778888888888888765554 67788888888888874 66666666655543 566655
Q ss_pred C
Q 006884 222 G 222 (627)
Q Consensus 222 ~ 222 (627)
+
T Consensus 252 ~ 252 (487)
T 3oja_A 252 G 252 (487)
T ss_dssp H
T ss_pred c
Confidence 4
No 304
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.63 E-value=9.3e-17 Score=181.96 Aligned_cols=176 Identities=22% Similarity=0.305 Sum_probs=97.3
Q ss_pred hhHHHHHHHHHhhCCC---CCCCCCCCCCCCCCCccceEeeCCCCcEEEEEcCCCCcccc--------------------
Q 006884 28 NSDKQALLDFADAVPH---ARKLNWNAAAPVCSSWIGVTCNVNRSRVIGIHLPGIGFTGP-------------------- 84 (627)
Q Consensus 28 ~~~~~~l~~~~~~~~~---~~~~~W~~~~~~c~~w~gv~C~~~~~~v~~L~l~~~~l~~~-------------------- 84 (627)
..++++|+++...... ....+|.....++.+|.+++++. ++++.|+|.+|++...
T Consensus 131 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~~ 208 (727)
T 4b8c_D 131 DCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST--PLTPKIELFANGKDEANQALLQHKKLSQYSIDEDDD 208 (727)
T ss_dssp -CCCHHHHHHHHHHHHHHTTC-----------------------------------------------------------
T ss_pred ccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC--CccceEEeeCCCCCcchhhHhhcCccCcccccCccc
Confidence 4578899999877621 22335755555555899888865 5566666655544321
Q ss_pred ------cCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhcc-ccceeccccccccCCCc
Q 006884 85 ------IPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSL-QLNALDLSFNAFTGNIP 157 (627)
Q Consensus 85 ------~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~-~L~~L~ls~N~l~~~~p 157 (627)
+++..+..+++|+.|+|++|.|. .+|..+..+++|++|+|++|.|+.+++.+..+ +|++|+|++|+|+ .+|
T Consensus 209 ~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~-~lp 286 (727)
T 4b8c_D 209 IENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLT-SLP 286 (727)
T ss_dssp -------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCSCCCGGGGGGTTCCEEECTTSCCS-SCC
T ss_pred cccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCcccChhhhCCCCCCEEeCcCCcCC-ccC
Confidence 23335777788888888888887 67777778888888888888888555445443 6888888888888 677
Q ss_pred hhhhccccccccccccccccccCCC-C-CCCccceEeccCCCccccCCCcCCC
Q 006884 158 PGFQNLTRLHLLNLQNNSISGAIPP-L-NLPRLKILNFSNNNLNGSIPDSLQT 208 (627)
Q Consensus 158 ~~~~~l~~L~~L~l~~N~l~~~~~~-~-~~~~L~~L~l~~N~l~~~~p~~~~~ 208 (627)
..|++|++|++|+|++|.|+ .+|. . .+++|+.|+|++|+|++.+|..+..
T Consensus 287 ~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 338 (727)
T 4b8c_D 287 AELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTE 338 (727)
T ss_dssp SSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHH
T ss_pred hhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhh
Confidence 78888888888888888886 4454 3 6778888888888888777766544
No 305
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.63 E-value=8e-16 Score=158.02 Aligned_cols=141 Identities=17% Similarity=0.229 Sum_probs=112.8
Q ss_pred CCccceEeeCC---------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeecc
Q 006884 57 SSWIGVTCNVN---------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQN 127 (627)
Q Consensus 57 ~~w~gv~C~~~---------~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~ 127 (627)
|+|..+.|+.. ...++.|+|++|++++..+. .|.++++|+.|+|++|.+++..|..|..+++|++|+|++
T Consensus 31 c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 31 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDG-DFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp EETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTT-TTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChh-hhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 47999999742 35789999999999965444 799999999999999999988899999999999999999
Q ss_pred ccccccCchhhccccceeccccccccCCCchhhhccccccccccccccccc--cCCCC--CCCccceEeccCCCcc
Q 006884 128 NYFSGVLPAFRSLQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISG--AIPPL--NLPRLKILNFSNNNLN 199 (627)
Q Consensus 128 N~l~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~~~~--~~~~L~~L~l~~N~l~ 199 (627)
|+++.++.... .+|++|++++|++++..+..|.++++|+.|++++|+++. ..+.. .+++|+.|++++|.++
T Consensus 110 n~l~~l~~~~~-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 110 NQLKELPEKMP-KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT 184 (330)
T ss_dssp SCCSBCCSSCC-TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC
T ss_pred CcCCccChhhc-ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc
Confidence 99997655443 578888888888887666678888888888888888753 33322 5666666666666665
No 306
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.63 E-value=2.3e-16 Score=157.80 Aligned_cols=144 Identities=19% Similarity=0.139 Sum_probs=112.1
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc--cccceec
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNALD 146 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~--~~L~~L~ 146 (627)
..++.|+|++|++++..+. .|.++++|+.|+|++|.+++..+..|..+++|++|+|++|++++.++..+. .+|++|+
T Consensus 28 ~~l~~L~ls~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSY-SFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (276)
T ss_dssp TTCCEEECTTCCCCEECTT-TTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred CCccEEECCCCcccccCHh-HhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEE
Confidence 4588889988888854443 788888899999999988876677888888899999999988888765433 3788888
Q ss_pred cccccccCCCchhhhcccccccccccccccccc-CCCC--CCCccceEeccCCCccccCCCcCCCCCCCc
Q 006884 147 LSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGA-IPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSS 213 (627)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~ 213 (627)
+++|++++..+..+..+++|++|++++|++++. +|.. .+++|+.|++++|++++..+..+..++.+.
T Consensus 107 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 176 (276)
T 2z62_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMP 176 (276)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCT
T ss_pred CCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhcc
Confidence 888888876666788888888888888888763 3543 778888888888888876666665555444
No 307
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.62 E-value=1.7e-16 Score=177.82 Aligned_cols=146 Identities=17% Similarity=0.330 Sum_probs=132.7
Q ss_pred CCcEEEEEcCCCCcccc-----------------cCccccC--CCCcccEEEccCCcCCCCCCCCcCccccccEEeeccc
Q 006884 68 RSRVIGIHLPGIGFTGP-----------------IPANSIG--KLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNN 128 (627)
Q Consensus 68 ~~~v~~L~l~~~~l~~~-----------------~~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 128 (627)
-.+++.|+|++|.++|. +|. .++ ++++|+.|+|++|.+.|.+|..|+++++|++|+|++|
T Consensus 205 l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~-~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n 283 (636)
T 4eco_A 205 LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTE-DLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACN 283 (636)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTS-CCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTC
T ss_pred ccCCCEEECcCCccccccccccccccccchhcccCch-hhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCC
Confidence 46899999999999986 898 788 9999999999999999999999999999999999999
Q ss_pred c-ccc-cCch-hhc-------cccceeccccccccCCCch--hhhccccccccccccccccccCCCC-CCCccceEeccC
Q 006884 129 Y-FSG-VLPA-FRS-------LQLNALDLSFNAFTGNIPP--GFQNLTRLHLLNLQNNSISGAIPPL-NLPRLKILNFSN 195 (627)
Q Consensus 129 ~-l~~-~~~~-~~~-------~~L~~L~ls~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~ 195 (627)
+ ++| .+|. +.. .+|+.|+|++|+++ .+|. .|+++++|+.|+|++|+++|.+|.. .+++|+.|++++
T Consensus 284 ~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~~~l~~L~~L~L~~ 362 (636)
T 4eco_A 284 RGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLPAFGSEIKLASLNLAY 362 (636)
T ss_dssp TTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECCCCEEEEEESEEECCS
T ss_pred CCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchhhhCCCCCCCEEECCC
Confidence 8 998 6664 433 58999999999999 7998 9999999999999999999988854 789999999999
Q ss_pred CCccccCCCcCCCCCC-CcccC
Q 006884 196 NNLNGSIPDSLQTFPN-SSFVG 216 (627)
Q Consensus 196 N~l~~~~p~~~~~~~~-l~~~~ 216 (627)
|+++ .+|..+..+++ |+.++
T Consensus 363 N~l~-~lp~~l~~l~~~L~~L~ 383 (636)
T 4eco_A 363 NQIT-EIPANFCGFTEQVENLS 383 (636)
T ss_dssp SEEE-ECCTTSEEECTTCCEEE
T ss_pred Cccc-cccHhhhhhcccCcEEE
Confidence 9999 89998988888 87764
No 308
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.62 E-value=3.2e-16 Score=174.89 Aligned_cols=154 Identities=17% Similarity=0.119 Sum_probs=134.4
Q ss_pred ccceEeeCC---------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeecccc
Q 006884 59 WIGVTCNVN---------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNY 129 (627)
Q Consensus 59 w~gv~C~~~---------~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~ 129 (627)
+..|.|... +..++.|+|++|++++..|. .|+++++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNT-TFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANP 92 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTT-TSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChh-HhccCccceEEECCCCccceeChhhccCccccCeeeCCCCc
Confidence 456778541 35799999999999966565 89999999999999999998889999999999999999999
Q ss_pred ccccCchhhc--cccceeccccccccCCCchhhhcccccccccccccccccc-CCCC-CCCccceEeccCCCccccCCCc
Q 006884 130 FSGVLPAFRS--LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGA-IPPL-NLPRLKILNFSNNNLNGSIPDS 205 (627)
Q Consensus 130 l~~~~~~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~~~~-~~~~L~~L~l~~N~l~~~~p~~ 205 (627)
+++..|..+. .+|++|+|++|++++..|..|.++++|++|+|++|++++. +|.. .+++|+.|++++|++++..|..
T Consensus 93 l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 172 (606)
T 3t6q_A 93 LIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKED 172 (606)
T ss_dssp CSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHH
T ss_pred ccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhh
Confidence 9999886443 3899999999999976688899999999999999999974 3443 7999999999999999888888
Q ss_pred CCCCCCCc
Q 006884 206 LQTFPNSS 213 (627)
Q Consensus 206 ~~~~~~l~ 213 (627)
+..+++|.
T Consensus 173 ~~~l~~L~ 180 (606)
T 3t6q_A 173 MSSLQQAT 180 (606)
T ss_dssp HHTTTTCC
T ss_pred hhhhcccc
Confidence 88887776
No 309
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.62 E-value=3.6e-16 Score=174.44 Aligned_cols=145 Identities=19% Similarity=0.149 Sum_probs=125.8
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhh-c-ccccee
Q 006884 68 RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFR-S-LQLNAL 145 (627)
Q Consensus 68 ~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~-~-~~L~~L 145 (627)
+.+++.|+|++|++++..+. .|.++++|+.|+|++|.+++..|..|.++++|++|+|++|++++.+|..+ . .+|++|
T Consensus 31 ~~~l~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 109 (606)
T 3vq2_A 31 PSSTKNIDLSFNPLKILKSY-SFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENL 109 (606)
T ss_dssp CTTCCEEECTTSCCCEECTT-TTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEE
T ss_pred CCCcCEEECCCCCcCEeChh-hccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEE
Confidence 46799999999999965555 89999999999999999998888899999999999999999999977643 3 389999
Q ss_pred ccccccccCCCchhhhccccccccccccccccc-cCCCC--CCCccceEeccCCCccccCCCcCCCCCCCc
Q 006884 146 DLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISG-AIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSS 213 (627)
Q Consensus 146 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~ 213 (627)
+|++|++++..|..|+++++|++|++++|++++ .+|.. .+++|++|++++|++++..|..++.+.+|.
T Consensus 110 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 180 (606)
T 3vq2_A 110 VAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENP 180 (606)
T ss_dssp ECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCT
T ss_pred EccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccc
Confidence 999999997777889999999999999999986 55654 899999999999999988888777665543
No 310
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.61 E-value=1.6e-15 Score=142.96 Aligned_cols=123 Identities=27% Similarity=0.321 Sum_probs=106.2
Q ss_pred EEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhh-c-cccceeccccc
Q 006884 73 GIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFR-S-LQLNALDLSFN 150 (627)
Q Consensus 73 ~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~-~-~~L~~L~ls~N 150 (627)
.+++++|+++ .+|. .+ .++|+.|+|++|+|+ .+|..|..+++|++|+|++|+|+++++..+ . .+|+.|+|++|
T Consensus 14 ~l~~~~~~l~-~ip~-~~--~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPK-GI--PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EEECTTSCCS-SCCS-CC--CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEcCCCCCC-cCCC-CC--CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 5778888888 7776 33 368999999999998 888999999999999999999999988643 3 38999999999
Q ss_pred cccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccc
Q 006884 151 AFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNG 200 (627)
Q Consensus 151 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~ 200 (627)
+|++..|..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|++..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 999877888999999999999999999766643 78999999999999874
No 311
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.61 E-value=1.8e-15 Score=140.44 Aligned_cols=130 Identities=24% Similarity=0.287 Sum_probs=106.3
Q ss_pred CccceEeeCCCCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchh
Q 006884 58 SWIGVTCNVNRSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAF 137 (627)
Q Consensus 58 ~w~gv~C~~~~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~ 137 (627)
+|.++.|+ +++++ .+|. .+ .++|+.|+|++|++++..+..|..+++|++|+|++|+++++++..
T Consensus 8 ~~~~l~~~------------~~~l~-~~p~-~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 71 (177)
T 2o6r_A 8 SGTEIRCN------------SKGLT-SVPT-GI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGV 71 (177)
T ss_dssp ETTEEECC------------SSCCS-SCCT-TC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTT
T ss_pred CCCEEEec------------CCCCc-cCCC-CC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhH
Confidence 57666664 45555 4554 22 378999999999999766777899999999999999999988864
Q ss_pred h-c-cccceeccccccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCC
Q 006884 138 R-S-LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIP 203 (627)
Q Consensus 138 ~-~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p 203 (627)
+ . .+|+.|+|++|+|++..+..|..+++|++|+|++|+|++.++.. .+++|+.|++++|++++..|
T Consensus 72 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 72 FDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 3 3 48999999999999777777899999999999999999766643 68999999999999987655
No 312
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.61 E-value=3.2e-16 Score=161.20 Aligned_cols=134 Identities=13% Similarity=0.106 Sum_probs=94.9
Q ss_pred hcccCcCCceEEEEEEEcCCcEEEEEEeccccc---------------CHHH--------HHHHHHHHHHhccCCceece
Q 006884 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAA---------------TKRE--------FEQQMEVVGTIGKHSNVVPV 395 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---------------~~~~--------~~~e~~~l~~l~~h~niv~~ 395 (627)
.+.||+|+||.||+|...+|+.||||+++.... .... ..+|...+.++ .+..+...
T Consensus 100 ~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL-~~~gv~vp 178 (397)
T 4gyi_A 100 GSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKAL-YEEGFPVP 178 (397)
T ss_dssp EEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHH-HHTTCSCC
T ss_pred cCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH-HhcCCCCC
Confidence 467999999999999998999999998753210 1111 23355555555 33333211
Q ss_pred eeEEeeCCceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC
Q 006884 396 RAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL 475 (627)
Q Consensus 396 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~ 475 (627)
.-+.. ...++||||++|++|..+... .....++.|++.+|.|||+.| ||||||||.|||+++++
T Consensus 179 ~p~~~--~~~~LVME~i~G~~L~~l~~~-----------~~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 179 EPIAQ--SRHTIVMSLVDALPMRQVSSV-----------PDPASLYADLIALILRLAKHG---LIHGDFNEFNILIREEK 242 (397)
T ss_dssp CEEEE--ETTEEEEECCSCEEGGGCCCC-----------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEEEEE
T ss_pred eeeec--cCceEEEEecCCccHhhhccc-----------HHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeCCC
Confidence 11111 233699999999888654321 123568899999999999998 99999999999998877
Q ss_pred C----------eEEeecccccccC
Q 006884 476 N----------GCISDVGLAHLIN 489 (627)
Q Consensus 476 ~----------~ki~DfG~a~~~~ 489 (627)
. +.|+||+-+....
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEETT
T ss_pred CcccccccccceEEEEeCCcccCC
Confidence 4 7899999876543
No 313
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.61 E-value=7.5e-16 Score=170.22 Aligned_cols=153 Identities=25% Similarity=0.342 Sum_probs=122.4
Q ss_pred CCCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCC--CCCCCcCccccccEEeeccccccccCc-hhh-c-cc
Q 006884 67 NRSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNG--TLPSDITSISSLQYVYLQNNYFSGVLP-AFR-S-LQ 141 (627)
Q Consensus 67 ~~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~~~~~-~~~-~-~~ 141 (627)
...+++.|+|++|.+++.+|. .++++++|+.|+|++|++++ .+|..+..+++|++|+|++|++++.+| ..+ . .+
T Consensus 351 ~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 351 SPSSFTFLNFTQNVFTDSVFQ-GCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SCCCCCEEECCSSCCCTTTTT-TCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred CCCCceEEECCCCccccchhh-hhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 446799999999999987877 78999999999999999985 234678899999999999999998444 323 2 47
Q ss_pred cceeccccccccCCCchhhhccccccccccccccccccCCC-C-CCCccceEeccCCCccccCCCc-CCCCCCCccc---
Q 006884 142 LNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPP-L-NLPRLKILNFSNNNLNGSIPDS-LQTFPNSSFV--- 215 (627)
Q Consensus 142 L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~-~~~~L~~L~l~~N~l~~~~p~~-~~~~~~l~~~--- 215 (627)
|+.|+|++|+|++.+|..+. ++|+.|+|++|+|+. +|. . .+++|+.|++++|+++ .+|.. +..+++|+.+
T Consensus 430 L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~-ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~ 505 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMS-IPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLH 505 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCC-CCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECC
T ss_pred CCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcc-cChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEec
Confidence 99999999999887776554 689999999999984 554 3 8899999999999999 56665 7777766654
Q ss_pred CCCCCCCCC
Q 006884 216 GNSMLCGLP 224 (627)
Q Consensus 216 ~n~~l~~~~ 224 (627)
+|++.|+|+
T Consensus 506 ~N~~~c~c~ 514 (562)
T 3a79_B 506 DNPWDCTCP 514 (562)
T ss_dssp SCCBCCCHH
T ss_pred CCCcCCCcc
Confidence 688877764
No 314
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=4.2e-16 Score=140.38 Aligned_cols=124 Identities=23% Similarity=0.259 Sum_probs=102.4
Q ss_pred CcEEEEEcCCCCcc-cccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc--ccccee
Q 006884 69 SRVIGIHLPGIGFT-GPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNAL 145 (627)
Q Consensus 69 ~~v~~L~l~~~~l~-~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~--~~L~~L 145 (627)
.+++.|++++|+++ +.+|. .+..+++|+.|+|++|.+++. ..+..+++|++|+|++|++++.+|.... .+|++|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~-~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEG-LTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCS-CCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred ccCeEEEccCCcCChhHHHH-HHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 57889999999998 78887 789999999999999999865 6788999999999999999987666543 479999
Q ss_pred ccccccccCC-CchhhhccccccccccccccccccCC---CC--CCCccceEeccC
Q 006884 146 DLSFNAFTGN-IPPGFQNLTRLHLLNLQNNSISGAIP---PL--NLPRLKILNFSN 195 (627)
Q Consensus 146 ~ls~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~~---~~--~~~~L~~L~l~~ 195 (627)
++++|++++. .|..+..+++|++|++++|++++..+ .. .+++|+.|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999999863 34788889999999999999987655 12 788888888764
No 315
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.61 E-value=8.4e-16 Score=142.76 Aligned_cols=112 Identities=23% Similarity=0.292 Sum_probs=98.4
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc--cccceec
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNALD 146 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~--~~L~~L~ 146 (627)
..++.|+|++|++++ +|...|..+++|+.|+|++|.|++..+..|..+++|++|+|++|++++.++..+. .+|+.|+
T Consensus 28 ~~l~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 106 (177)
T 2o6r_A 28 SSATRLELESNKLQS-LPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELA 106 (177)
T ss_dssp TTCSEEECCSSCCCC-CCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEEeCCCcccE-eCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEE
Confidence 579999999999995 5554789999999999999999976667789999999999999999999887543 4899999
Q ss_pred cccccccCCCchhhhccccccccccccccccccCC
Q 006884 147 LSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIP 181 (627)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 181 (627)
|++|+|++..+..|..+++|++|+|++|.+++..|
T Consensus 107 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 107 LDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 99999997666667899999999999999997655
No 316
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.61 E-value=3.7e-16 Score=174.30 Aligned_cols=145 Identities=18% Similarity=0.186 Sum_probs=102.0
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCC-cCccccccEEeeccccccccCchhhc--ccccee
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSD-ITSISSLQYVYLQNNYFSGVLPAFRS--LQLNAL 145 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~ls~N~l~~~~~~~~~--~~L~~L 145 (627)
.+++.|+|++|.+.+..|. .|..+++|+.|+|++|.+++..|.. +..+++|++|+|++|.+++.+|..+. .+|++|
T Consensus 376 ~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 454 (606)
T 3t6q_A 376 SHLQSLNLSYNEPLSLKTE-AFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHL 454 (606)
T ss_dssp TTCCEEECCSCSCEEECTT-TTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEE
T ss_pred CCCCEEECCCCcCCcCCHH-HhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEE
Confidence 5677888888887765555 6777777778888777777665544 77777777777777777777665432 367777
Q ss_pred ccccccccCC---CchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCCCcCCCCCCCccc
Q 006884 146 DLSFNAFTGN---IPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV 215 (627)
Q Consensus 146 ~ls~N~l~~~---~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~ 215 (627)
+|++|.+++. .+..+..+++|+.|+|++|++++.+|.. .+++|+.|++++|++++..|..+.+++.| .+
T Consensus 455 ~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L 528 (606)
T 3t6q_A 455 NLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YL 528 (606)
T ss_dssp ECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EE
T ss_pred ECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EE
Confidence 7777777652 2345777777777777777777666543 67777777777777777777777776666 44
No 317
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.61 E-value=5.5e-16 Score=157.79 Aligned_cols=143 Identities=17% Similarity=0.184 Sum_probs=106.5
Q ss_pred CcEEEEEcCCCCcccccCc---cccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccc---cCchh--hc-
Q 006884 69 SRVIGIHLPGIGFTGPIPA---NSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSG---VLPAF--RS- 139 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~---~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~---~~~~~--~~- 139 (627)
.+++.|+|++|.+++..+. ..+..+++|+.|+|++|.+++..|..|..+++|++|+|++|++.+ .++.. ..
T Consensus 117 ~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l 196 (310)
T 4glp_A 117 LALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKF 196 (310)
T ss_dssp BCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSS
T ss_pred CCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcC
Confidence 5688899999998876551 245678889999999999987778888889999999999998876 22222 12
Q ss_pred cccceeccccccccCCCch----hhhccccccccccccccccccCCCC--C---CCccceEeccCCCccccCCCcCCCCC
Q 006884 140 LQLNALDLSFNAFTGNIPP----GFQNLTRLHLLNLQNNSISGAIPPL--N---LPRLKILNFSNNNLNGSIPDSLQTFP 210 (627)
Q Consensus 140 ~~L~~L~ls~N~l~~~~p~----~~~~l~~L~~L~l~~N~l~~~~~~~--~---~~~L~~L~l~~N~l~~~~p~~~~~~~ 210 (627)
.+|++|+|++|+++ .+|. .+..+++|++|+|++|+|++..|.. . +++|++|+|++|+++ .+|..+. +
T Consensus 197 ~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~ 272 (310)
T 4glp_A 197 PAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--A 272 (310)
T ss_dssp CCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--S
T ss_pred CCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--C
Confidence 36888999999887 3444 3567788899999999988875532 3 368888999999888 6676553 4
Q ss_pred CCccc
Q 006884 211 NSSFV 215 (627)
Q Consensus 211 ~l~~~ 215 (627)
+|+.+
T Consensus 273 ~L~~L 277 (310)
T 4glp_A 273 KLRVL 277 (310)
T ss_dssp CCSCE
T ss_pred CCCEE
Confidence 45444
No 318
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.60 E-value=2.1e-16 Score=161.07 Aligned_cols=132 Identities=20% Similarity=0.246 Sum_probs=57.1
Q ss_pred cEEEEEcCCCCcccccCcccc-CCCCcccEEEccCCcCCCCCCCCcCcc-----ccccEEeeccccccccCchhh-c-cc
Q 006884 70 RVIGIHLPGIGFTGPIPANSI-GKLDALKILSLRSNYLNGTLPSDITSI-----SSLQYVYLQNNYFSGVLPAFR-S-LQ 141 (627)
Q Consensus 70 ~v~~L~l~~~~l~~~~~~~~~-~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~ls~N~l~~~~~~~~-~-~~ 141 (627)
+++.|+|++|++++.+|...+ ..+++|+.|+|++|++++. |..++.+ ++|++|+|++|++++.+|..+ . .+
T Consensus 96 ~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 174 (312)
T 1wwl_A 96 GLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPA 174 (312)
T ss_dssp CCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSS
T ss_pred CccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCC
Confidence 344445555554444444211 4444455555555554433 4444444 444444444444444443222 1 14
Q ss_pred cceeccccccccCC--Cchhh--hcccccccccccccccccc--CCC-C--CCCccceEeccCCCccccC
Q 006884 142 LNALDLSFNAFTGN--IPPGF--QNLTRLHLLNLQNNSISGA--IPP-L--NLPRLKILNFSNNNLNGSI 202 (627)
Q Consensus 142 L~~L~ls~N~l~~~--~p~~~--~~l~~L~~L~l~~N~l~~~--~~~-~--~~~~L~~L~l~~N~l~~~~ 202 (627)
|++|+|++|++++. +|..+ ..+++|++|+|++|+|++. ++. . .+++|+.|++++|++++.+
T Consensus 175 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 244 (312)
T 1wwl_A 175 LSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAA 244 (312)
T ss_dssp CCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSC
T ss_pred CCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCccc
Confidence 44444444444432 12222 4444444444444444421 111 0 3344455555555554443
No 319
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.60 E-value=1.4e-15 Score=150.73 Aligned_cols=138 Identities=17% Similarity=0.274 Sum_probs=117.5
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhccccceeccc
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQLNALDLS 148 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~L~~L~ls 148 (627)
.+++.|++++|+++ .++ .+..+++|+.|+|++|+|++..| +..+++|++|+|++|++++.++... .+|+.|+|+
T Consensus 41 ~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~l~~~~~-~~L~~L~L~ 114 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQ-SLA--GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKNLNGIPS-ACLSRLFLD 114 (263)
T ss_dssp TTCSEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSCCTTCCC-SSCCEEECC
T ss_pred CcCcEEECcCCCcc-cch--HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCCcCcccc-CcccEEEcc
Confidence 57899999999998 566 48999999999999999995444 9999999999999999999765433 789999999
Q ss_pred cccccCCCchhhhccccccccccccccccccCCCCCCCccceEeccCCCccccCCCcCCCCCCCcccC
Q 006884 149 FNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 149 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
+|+|++ +| .+..+++|+.|+|++|+|++..+-..+++|+.|++++|++++. ..+..+++|..++
T Consensus 115 ~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~~~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~ 178 (263)
T 1xeu_A 115 NNELRD-TD-SLIHLKNLEILSIRNNKLKSIVMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWID 178 (263)
T ss_dssp SSCCSB-SG-GGTTCTTCCEEECTTSCCCBCGGGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEE
T ss_pred CCccCC-Ch-hhcCcccccEEECCCCcCCCChHHccCCCCCEEECCCCcCcch--HHhccCCCCCEEe
Confidence 999996 44 5999999999999999999764333899999999999999966 6677788777654
No 320
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.60 E-value=6.7e-16 Score=178.75 Aligned_cols=149 Identities=21% Similarity=0.234 Sum_probs=124.2
Q ss_pred CccceEeeCCCCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCC-CCCcCccccccEEeeccccccccCch
Q 006884 58 SWIGVTCNVNRSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTL-PSDITSISSLQYVYLQNNYFSGVLPA 136 (627)
Q Consensus 58 ~w~gv~C~~~~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~ls~N~l~~~~~~ 136 (627)
+|..|.+ .+.+++.|+|++|.+++..|. .|.++++|+.|+|++|.+.+.+ |..|.++++|++|+|++|++++..|.
T Consensus 15 ~L~~vP~--lp~~l~~LdLs~N~i~~i~~~-~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 15 NLTQVPQ--VLNTTERLLLSFNYIRTVTAS-SFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CSSCCCS--SCTTCCEEEEESCCCCEECSS-SCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCC--CCCCcCEEECCCCcCCccChh-HCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 5777777 457899999999999876666 8999999999999999766666 77899999999999999999998776
Q ss_pred hhc--cccceeccccccccCCCchh--hhccccccccccccccccccCCC--C-CCCccceEeccCCCccccCCCcCCCC
Q 006884 137 FRS--LQLNALDLSFNAFTGNIPPG--FQNLTRLHLLNLQNNSISGAIPP--L-NLPRLKILNFSNNNLNGSIPDSLQTF 209 (627)
Q Consensus 137 ~~~--~~L~~L~ls~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~~~~--~-~~~~L~~L~l~~N~l~~~~p~~~~~~ 209 (627)
.+. .+|++|+|++|.+++.+|.. |.++++|++|+|++|++++..+. . .+++|++|+|++|.+++..|..+..+
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l 171 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHH
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccc
Confidence 443 38999999999999877665 88999999999999999886654 2 78999999999999988888776544
No 321
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.60 E-value=1.1e-15 Score=144.66 Aligned_cols=140 Identities=22% Similarity=0.316 Sum_probs=115.8
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCch-hhc-cccceec
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPA-FRS-LQLNALD 146 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~-~~~-~~L~~L~ 146 (627)
.+++.|++++|+++ .+| .+..+++|+.|+|++|.++ .+..+..+++|++|+|++|++++..+. +.. .+|++|+
T Consensus 44 ~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT--GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HTCCEEEEESSCCS-CCT--TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred CCccEEeccCCCcc-ChH--HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 46899999999998 666 4899999999999999776 334789999999999999999985554 433 3899999
Q ss_pred cccccccCCCchhhhcccccccccccccc-ccccCCCC-CCCccceEeccCCCccccCCCcCCCCCCCcccC
Q 006884 147 LSFNAFTGNIPPGFQNLTRLHLLNLQNNS-ISGAIPPL-NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
|++|++++..|..+..+++|++|+|++|+ ++ .+|.. .+++|+.|++++|++++ ++ .+..+++|+.++
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~ 187 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIMPLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLY 187 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCGGGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEE
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccHhhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEE
Confidence 99999998888999999999999999998 55 45544 88999999999999985 44 667777776653
No 322
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.60 E-value=1.9e-15 Score=171.07 Aligned_cols=155 Identities=19% Similarity=0.276 Sum_probs=114.1
Q ss_pred cEEEEEcCCCCcc--cccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCch---------hh
Q 006884 70 RVIGIHLPGIGFT--GPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPA---------FR 138 (627)
Q Consensus 70 ~v~~L~l~~~~l~--~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~---------~~ 138 (627)
.++.|++++|.+. +.+|. .|..+++|+.|+|++|+|++..|..|.++++|++|+|++|++++..+. +.
T Consensus 455 ~L~~L~l~~n~l~~~~~~p~-~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~ 533 (680)
T 1ziw_A 455 SLQRLMLRRVALKNVDSSPS-PFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLK 533 (680)
T ss_dssp TCCEEECTTSCCBCTTCSSC-TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTT
T ss_pred ccccchhccccccccccCCc-ccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhc
Confidence 3444444444443 34555 678888888888888888877677788888888888888888875321 22
Q ss_pred c-cccceeccccccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCCCcC----CCCCC
Q 006884 139 S-LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSL----QTFPN 211 (627)
Q Consensus 139 ~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~----~~~~~ 211 (627)
. .+|+.|+|++|+|+...+..|.++++|+.|+|++|+|++.++.. .+++|+.|++++|++++..|..+ .++..
T Consensus 534 ~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~ 613 (680)
T 1ziw_A 534 GLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTE 613 (680)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSE
T ss_pred CCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCE
Confidence 2 37889999999998444446888999999999999998655543 78899999999999987766543 45555
Q ss_pred CcccCCCCCCCCCC
Q 006884 212 SSFVGNSMLCGLPL 225 (627)
Q Consensus 212 l~~~~n~~l~~~~~ 225 (627)
+...+|++.|+|+.
T Consensus 614 l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 614 LDMRFNPFDCTCES 627 (680)
T ss_dssp EECTTCCCCBCCCC
T ss_pred EEccCCCcccCCcc
Confidence 66668999988764
No 323
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.59 E-value=1.3e-15 Score=170.63 Aligned_cols=157 Identities=22% Similarity=0.276 Sum_probs=134.5
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeecccccc-ccCchhhc--ccccee
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFS-GVLPAFRS--LQLNAL 145 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~-~~~~~~~~--~~L~~L 145 (627)
..++.+++.+++.....+...+..+++|+.++++.|.+.+..|..+..+++|++|+|++|.+. +.+|..+. .+|++|
T Consensus 420 ~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L 499 (635)
T 4g8a_A 420 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 499 (635)
T ss_dssp TTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred ccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEE
Confidence 457778888888777777667899999999999999999899999999999999999999854 45565433 389999
Q ss_pred ccccccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCCCcCCCC-CCCcc---cCCCC
Q 006884 146 DLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTF-PNSSF---VGNSM 219 (627)
Q Consensus 146 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~-~~l~~---~~n~~ 219 (627)
+|++|+|++..|..|.++++|++|+|++|+|++..|.. .+++|+.|+|++|+|++..|..+..+ ++|++ -+|++
T Consensus 500 ~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~ 579 (635)
T 4g8a_A 500 DLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 579 (635)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCB
T ss_pred ECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCC
Confidence 99999999988999999999999999999999877753 89999999999999999999988776 45554 47999
Q ss_pred CCCCCC
Q 006884 220 LCGLPL 225 (627)
Q Consensus 220 l~~~~~ 225 (627)
.|+|.+
T Consensus 580 ~C~C~~ 585 (635)
T 4g8a_A 580 ACTCEH 585 (635)
T ss_dssp CCSGGG
T ss_pred cccCCc
Confidence 998764
No 324
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.59 E-value=2.3e-15 Score=161.03 Aligned_cols=156 Identities=21% Similarity=0.214 Sum_probs=99.8
Q ss_pred CccceEeeCC---------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccc
Q 006884 58 SWIGVTCNVN---------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNN 128 (627)
Q Consensus 58 ~w~gv~C~~~---------~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 128 (627)
.|..|.|... ...++.|+|++|++++..+. .|.++++|+.|+|++|.|++..|..|.++++|++|+|++|
T Consensus 44 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~-~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 44 QFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVN-SFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp TSCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTT-TTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHH-HhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 3667888642 34578888888888854444 7888888888888888888666677788888888888888
Q ss_pred cccccCchhhc--cccceeccccccccCCCchhhhccccccccccc-------------------------cccccccCC
Q 006884 129 YFSGVLPAFRS--LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQ-------------------------NNSISGAIP 181 (627)
Q Consensus 129 ~l~~~~~~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~-------------------------~N~l~~~~~ 181 (627)
+++++++..+. .+|++|+|++|+|++..+..|.++++|+.|+|+ +|+|+. +|
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~ 201 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP 201 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc
Confidence 88877764332 367777777777765444445555555555554 444442 22
Q ss_pred CC-CCCccceEeccCCCccccCCCcCCCCCCCccc
Q 006884 182 PL-NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV 215 (627)
Q Consensus 182 ~~-~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~ 215 (627)
.. .+++|+.|+|++|++++..|..|.++++|+.+
T Consensus 202 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 236 (440)
T 3zyj_A 202 NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKL 236 (440)
T ss_dssp CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ccCCCcccCEEECCCCccCccChhhhccCccCCEE
Confidence 22 45555555555555555555555555555544
No 325
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.59 E-value=1.1e-15 Score=167.26 Aligned_cols=146 Identities=23% Similarity=0.373 Sum_probs=120.1
Q ss_pred CCCCCCCCCC----Cccce-EeeCCCCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccE
Q 006884 48 NWNAAAPVCS----SWIGV-TCNVNRSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQY 122 (627)
Q Consensus 48 ~W~~~~~~c~----~w~gv-~C~~~~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 122 (627)
+|.....+|. .|.|+ .|.. .+++.|+|++|+|++ +|. .+ +++|+.|+|++|+|+ .+| ..+++|++
T Consensus 35 ~W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~-~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~ 104 (571)
T 3cvr_A 35 KWEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPD-NL--PPQITVLEITQNALI-SLP---ELPASLEY 104 (571)
T ss_dssp HHHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCS-CC--CTTCSEEECCSSCCS-CCC---CCCTTCCE
T ss_pred HHhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCH-hH--cCCCCEEECcCCCCc-ccc---cccCCCCE
Confidence 5755555663 49999 7875 579999999999996 887 34 388999999999999 788 45799999
Q ss_pred EeeccccccccCchhhccccceeccccccccCCCchhhhccccccccccccccccccCCCCCCCccceEeccCCCccccC
Q 006884 123 VYLQNNYFSGVLPAFRSLQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSI 202 (627)
Q Consensus 123 L~ls~N~l~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~ 202 (627)
|+|++|+|+++++ +. .+|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +
T Consensus 105 L~Ls~N~l~~ip~-l~-~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~-~l~~L~~L~Ls~N~L~~-l 175 (571)
T 3cvr_A 105 LDACDNRLSTLPE-LP-ASLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE-LPTSLEVLSVRNNQLTF-L 175 (571)
T ss_dssp EECCSSCCSCCCC-CC-TTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCSC-C
T ss_pred EEccCCCCCCcch-hh-cCCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC-cCCCcCEEECCCCCCCC-c
Confidence 9999999999655 43 389999999999997 776 68899999999999997 555 78899999999999986 7
Q ss_pred CCcCCCCCCCccc
Q 006884 203 PDSLQTFPNSSFV 215 (627)
Q Consensus 203 p~~~~~~~~l~~~ 215 (627)
|. +. ++|..+
T Consensus 176 p~-l~--~~L~~L 185 (571)
T 3cvr_A 176 PE-LP--ESLEAL 185 (571)
T ss_dssp CC-CC--TTCCEE
T ss_pred ch-hh--CCCCEE
Confidence 77 54 555554
No 326
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.59 E-value=8.2e-16 Score=175.99 Aligned_cols=145 Identities=20% Similarity=0.312 Sum_probs=130.3
Q ss_pred CCcEEEEEcCCCCccc-----------------ccCccccC--CCCcccEEEccCCcCCCCCCCCcCccccccEEeeccc
Q 006884 68 RSRVIGIHLPGIGFTG-----------------PIPANSIG--KLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNN 128 (627)
Q Consensus 68 ~~~v~~L~l~~~~l~~-----------------~~~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 128 (627)
-.+++.|+|++|+++| .+|. .++ ++++|+.|+|++|.+.+.+|..|+++++|++|+|++|
T Consensus 447 L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~-~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N 525 (876)
T 4ecn_A 447 LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENE-ELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACN 525 (876)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTS-CCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTC
T ss_pred CCCCCEEECcCCcCCCCcccccccccccccccccCCh-hhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCC
Confidence 4679999999999998 4888 677 9999999999999999999999999999999999999
Q ss_pred c-ccc-cCch-hhcc--------ccceeccccccccCCCch--hhhccccccccccccccccccCCCC-CCCccceEecc
Q 006884 129 Y-FSG-VLPA-FRSL--------QLNALDLSFNAFTGNIPP--GFQNLTRLHLLNLQNNSISGAIPPL-NLPRLKILNFS 194 (627)
Q Consensus 129 ~-l~~-~~~~-~~~~--------~L~~L~ls~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~ 194 (627)
+ ++| .+|. +... +|+.|+|++|+|+ .+|. .|+++++|+.|+|++|+|+ .+|.. .+++|+.|+|+
T Consensus 526 ~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~~L~~L~Ls 603 (876)
T 4ecn_A 526 RGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNVKLTDLKLD 603 (876)
T ss_dssp TTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCCTTSEESEEECC
T ss_pred CCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhhcCCCcceEEECc
Confidence 8 998 6664 3322 7999999999999 7998 9999999999999999999 77754 89999999999
Q ss_pred CCCccccCCCcCCCCCC-CcccC
Q 006884 195 NNNLNGSIPDSLQTFPN-SSFVG 216 (627)
Q Consensus 195 ~N~l~~~~p~~~~~~~~-l~~~~ 216 (627)
+|+++ .+|..+.++++ |+.++
T Consensus 604 ~N~l~-~lp~~l~~l~~~L~~L~ 625 (876)
T 4ecn_A 604 YNQIE-EIPEDFCAFTDQVEGLG 625 (876)
T ss_dssp SSCCS-CCCTTSCEECTTCCEEE
T ss_pred CCccc-cchHHHhhccccCCEEE
Confidence 99999 99999998888 87764
No 327
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.59 E-value=4.8e-16 Score=168.31 Aligned_cols=31 Identities=6% Similarity=0.048 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHHHhccCCceeceeeEEeeCC
Q 006884 372 TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD 403 (627)
Q Consensus 372 ~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~ 403 (627)
..++|..|++.+.++ +|+|+|+++|||....
T Consensus 322 g~~eF~~Eve~L~~i-~HrNLV~L~gyC~s~~ 352 (487)
T 3oja_A 322 GSETERLECERENQA-RQREIDALKEQYRTVI 352 (487)
T ss_dssp ---CHHHHHHHHHHH-HHHHHHHHHHHTCCCC
T ss_pred cHHHHHHHHHHHhcc-cccchhhHHHHhcChH
Confidence 367899999999999 9999999999997654
No 328
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.59 E-value=1.7e-15 Score=168.55 Aligned_cols=109 Identities=18% Similarity=0.172 Sum_probs=90.6
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhh-c-cccceec
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFR-S-LQLNALD 146 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~-~-~~L~~L~ 146 (627)
.+++.|+|++|.+++..|. .|+.+++|+.|+|++|.|++..|..|+++++|++|+|++|.++++++..+ . .+|++|+
T Consensus 75 ~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTY-AFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 153 (597)
T ss_dssp CCCSEEECTTSCCCEECTT-TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCCCChH-HhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEE
Confidence 5688899999988865555 78889999999999999888777778888999999999999888877653 3 3788999
Q ss_pred cccccccCCCchhhhccccccccccccccccc
Q 006884 147 LSFNAFTGNIPPGFQNLTRLHLLNLQNNSISG 178 (627)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 178 (627)
|++|.|++..|..|.++++|+.|+|++|+|++
T Consensus 154 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 185 (597)
T 3oja_B 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 185 (597)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECTTSCCSB
T ss_pred eeCCcCCCCChhhhhcCCcCcEEECcCCCCCC
Confidence 99998888777788888888888888888875
No 329
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.59 E-value=8.3e-16 Score=168.19 Aligned_cols=151 Identities=26% Similarity=0.352 Sum_probs=96.1
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCC--CCCCCcCccccccEEeeccccccccCc-h-hhc-cccc
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNG--TLPSDITSISSLQYVYLQNNYFSGVLP-A-FRS-LQLN 143 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~~~~~-~-~~~-~~L~ 143 (627)
..++.|+|++|.+++.+|. .++.+++|+.|+|++|++++ .+|..+..+++|++|+|++|++++.+| . +.. .+|+
T Consensus 324 ~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 324 SPFLHLDFSNNLLTDTVFE-NCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCEEECCSSCCCTTTTT-TCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CcccEEEeECCccChhhhh-hhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 4567777777777766665 56777777777777777764 445556677777777777777776333 2 222 3677
Q ss_pred eeccccccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCCCc-CCCCCCCccc---CC
Q 006884 144 ALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDS-LQTFPNSSFV---GN 217 (627)
Q Consensus 144 ~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~-~~~~~~l~~~---~n 217 (627)
.|+|++|++++.+|..+. ++|+.|+|++|+|+ .+|.. .+++|+.|++++|+++ .+|.. +..+++|+.+ +|
T Consensus 403 ~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N 478 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTN 478 (520)
T ss_dssp EEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSS
T ss_pred EEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCC
Confidence 777777777666655543 56777777777776 44432 6777777777777777 45544 6555555543 55
Q ss_pred CCCCCCC
Q 006884 218 SMLCGLP 224 (627)
Q Consensus 218 ~~l~~~~ 224 (627)
+..|+|+
T Consensus 479 ~~~c~c~ 485 (520)
T 2z7x_B 479 PWDCSCP 485 (520)
T ss_dssp CBCCCHH
T ss_pred CCcccCC
Confidence 6555543
No 330
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.59 E-value=5.6e-16 Score=157.92 Aligned_cols=143 Identities=20% Similarity=0.194 Sum_probs=114.6
Q ss_pred CCcEEEEEcCCCCcccccCccccCCC-----CcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccC---chh--
Q 006884 68 RSRVIGIHLPGIGFTGPIPANSIGKL-----DALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVL---PAF-- 137 (627)
Q Consensus 68 ~~~v~~L~l~~~~l~~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~---~~~-- 137 (627)
..+++.|+|++|++++. |. .++.+ ++|+.|+|++|+|++..|..|+.+++|++|+|++|++.+.. +..
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~-~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 197 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DA-WLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCP 197 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SS-HHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCT
T ss_pred CCCccEEEccCCCCcch-hH-HHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHh
Confidence 36799999999999976 65 67777 89999999999999888899999999999999999988752 222
Q ss_pred hc-cccceeccccccccC--CCc-hhhhccccccccccccccccccCCCC---CCCccceEeccCCCccccCCCcCCCCC
Q 006884 138 RS-LQLNALDLSFNAFTG--NIP-PGFQNLTRLHLLNLQNNSISGAIPPL---NLPRLKILNFSNNNLNGSIPDSLQTFP 210 (627)
Q Consensus 138 ~~-~~L~~L~ls~N~l~~--~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~---~~~~L~~L~l~~N~l~~~~p~~~~~~~ 210 (627)
.. .+|++|+|++|+|++ .++ ..+.++++|+.|+|++|+|++.+|.. .+++|+.|+|++|+++ .+|..+. +
T Consensus 198 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~ 274 (312)
T 1wwl_A 198 LKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--A 274 (312)
T ss_dssp TSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--S
T ss_pred ccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--C
Confidence 22 379999999999983 122 34567889999999999999877532 5789999999999998 7887765 5
Q ss_pred CCccc
Q 006884 211 NSSFV 215 (627)
Q Consensus 211 ~l~~~ 215 (627)
+|+.+
T Consensus 275 ~L~~L 279 (312)
T 1wwl_A 275 KLSVL 279 (312)
T ss_dssp EEEEE
T ss_pred CceEE
Confidence 55554
No 331
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.59 E-value=2e-15 Score=155.08 Aligned_cols=144 Identities=21% Similarity=0.271 Sum_probs=114.6
Q ss_pred cEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCC--CCCCCcCccccccEEeeccccccccCchhhccccceecc
Q 006884 70 RVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNG--TLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQLNALDL 147 (627)
Q Consensus 70 ~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~L~~L~l 147 (627)
.++.|++++|.+++ ++...|.++++|+.|+|++|.++. ..|..+..+++|++|++++|+++.++.... .+|+.|+|
T Consensus 122 ~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~-~~L~~L~l 199 (330)
T 1xku_A 122 TLQELRVHENEITK-VRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLP-PSLTELHL 199 (330)
T ss_dssp TCCEEECCSSCCCB-BCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCC-TTCSEEEC
T ss_pred cccEEECCCCcccc-cCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCcccc-ccCCEEEC
Confidence 45555565665553 333357888888888888888853 667778888888888888888887655443 67999999
Q ss_pred ccccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCCCcCCCCCCCcccC
Q 006884 148 SFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
++|++++..|..|..+++|+.|+|++|++++..+.. .+++|+.|++++|+++ .+|..+..+++|+.++
T Consensus 200 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~ 269 (330)
T 1xku_A 200 DGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVY 269 (330)
T ss_dssp TTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEE
T ss_pred CCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEE
Confidence 999999877889999999999999999999876643 7889999999999998 8888888888888764
No 332
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.58 E-value=1.9e-15 Score=167.17 Aligned_cols=153 Identities=20% Similarity=0.286 Sum_probs=87.6
Q ss_pred cEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCC-CCcCccccccEEeeccccccccCchhhc--cccceec
Q 006884 70 RVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLP-SDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNALD 146 (627)
Q Consensus 70 ~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~~~~~~--~~L~~L~ 146 (627)
+++.|+|++|.+.+ ++. .+..+++|+.|+|++|.+++..| ..+..+++|++|+|++|.+.+.+|..+. .+|+.|+
T Consensus 374 ~L~~L~l~~n~l~~-~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 451 (570)
T 2z63_A 374 SLKYLDLSFNGVIT-MSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 451 (570)
T ss_dssp CCCEEECCSCSEEE-EEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEE
T ss_pred ccCEEECCCCcccc-ccc-cccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEE
Confidence 44455555555442 233 25566666666666666655444 3456666666666666666665554322 2566666
Q ss_pred ccccccc-CCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCCCcCCCCCCCccc---CCCCC
Q 006884 147 LSFNAFT-GNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV---GNSML 220 (627)
Q Consensus 147 ls~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~---~n~~l 220 (627)
|++|.++ +.+|..|..+++|+.|+|++|++++..|.. .+++|+.|++++|++++..|..+.++++|+.+ +|+..
T Consensus 452 l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 531 (570)
T 2z63_A 452 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWD 531 (570)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCccc
Confidence 6666665 456666666666666666666666655533 56666666666666665555555555555433 45554
Q ss_pred CCCC
Q 006884 221 CGLP 224 (627)
Q Consensus 221 ~~~~ 224 (627)
|.++
T Consensus 532 ~~~~ 535 (570)
T 2z63_A 532 CSCP 535 (570)
T ss_dssp CCTT
T ss_pred CCCc
Confidence 4443
No 333
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.58 E-value=1.6e-15 Score=164.04 Aligned_cols=148 Identities=20% Similarity=0.185 Sum_probs=130.2
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc--ccccee
Q 006884 68 RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNAL 145 (627)
Q Consensus 68 ~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~--~~L~~L 145 (627)
-.+++.|+|++|.+++..|. .|.++++|+.|+|++|.|++..+..|.++++|++|+|++|++.+.++..+. .+|+.|
T Consensus 55 l~~L~~L~L~~n~i~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 133 (477)
T 2id5_A 55 FPHLEELELNENIVSAVEPG-AFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSL 133 (477)
T ss_dssp CTTCCEEECTTSCCCEECTT-TTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCccCEeChh-hhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEE
Confidence 36899999999999976676 899999999999999999966566789999999999999999999886443 389999
Q ss_pred ccccccccCCCchhhhccccccccccccccccccCCC--CCCCccceEeccCCCccccCCCcCCCCCCCcccC
Q 006884 146 DLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPP--LNLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 146 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~--~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
+|++|.+++..|..|.++++|+.|+|++|++++..+. ..+++|+.|++++|.+++..+..+..+++|+.++
T Consensus 134 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~ 206 (477)
T 2id5_A 134 EVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLE 206 (477)
T ss_dssp EECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEE
T ss_pred ECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceee
Confidence 9999999988888999999999999999999975543 2899999999999999988888888888887764
No 334
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.58 E-value=5.1e-15 Score=139.47 Aligned_cols=126 Identities=23% Similarity=0.366 Sum_probs=107.5
Q ss_pred cEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhcc-ccceeccccccccCCCchhhhcccccccccccccc
Q 006884 97 KILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSL-QLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNS 175 (627)
Q Consensus 97 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~-~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 175 (627)
+.+++++|.|+ .+|..+. ++|++|+|++|+|+.++..+... +|+.|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 57999999999 7887764 69999999999999777555554 89999999999998778889999999999999999
Q ss_pred ccccCCCC--CCCccceEeccCCCccccCCCcCCCCCCCccc---CCCCCCCCCC
Q 006884 176 ISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV---GNSMLCGLPL 225 (627)
Q Consensus 176 l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~---~n~~l~~~~~ 225 (627)
|++..|.. .+++|+.|+|++|++++..+..|..+++|+.+ +|++.|++.+
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l 144 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNM 144 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGG
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcC
Confidence 99877754 89999999999999996666678777777655 7888887653
No 335
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.58 E-value=1.2e-15 Score=172.65 Aligned_cols=147 Identities=20% Similarity=0.224 Sum_probs=118.7
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCch-hhc-ccccee
Q 006884 68 RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPA-FRS-LQLNAL 145 (627)
Q Consensus 68 ~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~-~~~-~~L~~L 145 (627)
+.+++.|+|++|++++ +++..|.++++|+.|+|++|.+++..|..|+++++|++|+|++|+++++++. +.. .+|++|
T Consensus 24 ~~~l~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L 102 (680)
T 1ziw_A 24 PTNITVLNLTHNQLRR-LPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTEL 102 (680)
T ss_dssp CTTCSEEECCSSCCCC-CCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEE
T ss_pred CCCCcEEECCCCCCCC-cCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEE
Confidence 3578999999999985 4444799999999999999999988888899999999999999999988875 443 379999
Q ss_pred ccccccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCCCcCC--CCCCCccc
Q 006884 146 DLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQ--TFPNSSFV 215 (627)
Q Consensus 146 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~--~~~~l~~~ 215 (627)
+|++|++++..|..|+++++|++|+|++|++++..|.. .+++|++|++++|.+++..+..+. .+++|+.+
T Consensus 103 ~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L 176 (680)
T 1ziw_A 103 HLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKL 176 (680)
T ss_dssp ECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEE
T ss_pred ECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEE
Confidence 99999998777778999999999999999998877654 788889999999888876665433 23444443
No 336
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.58 E-value=8.4e-16 Score=138.40 Aligned_cols=125 Identities=22% Similarity=0.302 Sum_probs=108.3
Q ss_pred CCCCcccEEEccCCcCC-CCCCCCcCccccccEEeeccccccccCchhhc-cccceeccccccccCCCchhhhccccccc
Q 006884 91 GKLDALKILSLRSNYLN-GTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALDLSFNAFTGNIPPGFQNLTRLHL 168 (627)
Q Consensus 91 ~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~ 168 (627)
...++|+.|+|++|.++ +.+|..+..+++|++|+|++|.+++. +.+.. .+|++|+|++|++++.+|..+..+++|++
T Consensus 14 ~~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 14 RTPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CCGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 34578999999999998 89999999999999999999999998 44444 38999999999999879999999999999
Q ss_pred cccccccccccC--CCC-CCCccceEeccCCCccccCC---CcCCCCCCCcccC
Q 006884 169 LNLQNNSISGAI--PPL-NLPRLKILNFSNNNLNGSIP---DSLQTFPNSSFVG 216 (627)
Q Consensus 169 L~l~~N~l~~~~--~~~-~~~~L~~L~l~~N~l~~~~p---~~~~~~~~l~~~~ 216 (627)
|++++|++++.. ... .+++|+.|++++|++++..+ ..+..+++|++++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~ 146 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLD 146 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEET
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCccccc
Confidence 999999999743 223 89999999999999996655 4688888888776
No 337
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.58 E-value=3.3e-15 Score=153.60 Aligned_cols=125 Identities=22% Similarity=0.317 Sum_probs=77.6
Q ss_pred ccCCCCcccEEEccCCcCC--CCCCCCcCccccccEEeeccccccccCchhhccccceeccccccccCCCchhhhccccc
Q 006884 89 SIGKLDALKILSLRSNYLN--GTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQLNALDLSFNAFTGNIPPGFQNLTRL 166 (627)
Q Consensus 89 ~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L 166 (627)
.|.++++|+.|+|++|.++ +..|..+..+ +|++|++++|++++++.... .+|+.|+|++|++++..|..|..+++|
T Consensus 142 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~~~-~~L~~L~l~~n~i~~~~~~~l~~l~~L 219 (332)
T 2ft3_A 142 VFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLP-ETLNELHLDHNKIQAIELEDLLRYSKL 219 (332)
T ss_dssp GGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSSSC-SSCSCCBCCSSCCCCCCTTSSTTCTTC
T ss_pred HhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCcccc-CCCCEEECCCCcCCccCHHHhcCCCCC
Confidence 3444444444444444442 2334444444 44444444444444332222 467777777777776666777888888
Q ss_pred cccccccccccccCCCC--CCCccceEeccCCCccccCCCcCCCCCCCcccC
Q 006884 167 HLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 167 ~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
+.|+|++|++++..+.. .+++|+.|++++|+++ .+|..+..+++|+.++
T Consensus 220 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~ 270 (332)
T 2ft3_A 220 YRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVY 270 (332)
T ss_dssp SCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEE
T ss_pred CEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEE
Confidence 88888888887665543 6778888888888887 7777777777777654
No 338
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.58 E-value=2.1e-15 Score=166.14 Aligned_cols=149 Identities=18% Similarity=0.253 Sum_probs=103.8
Q ss_pred CcEEEEEcCCCCcccccC-ccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhccccceecc
Q 006884 69 SRVIGIHLPGIGFTGPIP-ANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQLNALDL 147 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~-~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~L~~L~l 147 (627)
.+++.|+|++|++++..+ ...+..+++|+.|+|++|+|+ .+|..+..+++|++|+|++|++++++... ..+|+.|+|
T Consensus 361 ~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l~~~~-~~~L~~L~L 438 (549)
T 2z81_A 361 PSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVVKTCI-PQTLEVLDV 438 (549)
T ss_dssp TTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCCCTTS-CTTCSEEEC
T ss_pred ccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcccccchh-cCCceEEEC
Confidence 345555555555553211 123666777777777777776 56666777777777777777776544322 246778888
Q ss_pred ccccccCCCchhhhccccccccccccccccccCCCC-CCCccceEeccCCCccccCCCcCCCCCCCccc---CCCCCCCC
Q 006884 148 SFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL-NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV---GNSMLCGL 223 (627)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~---~n~~l~~~ 223 (627)
++|+|++.+ ..+++|++|+|++|+|+ .+|.. .+++|+.|+|++|++++.+|..+..+++|+.+ +|++.|++
T Consensus 439 s~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 513 (549)
T 2z81_A 439 SNNNLDSFS----LFLPRLQELYISRNKLK-TLPDASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 513 (549)
T ss_dssp CSSCCSCCC----CCCTTCCEEECCSSCCS-SCCCGGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCH
T ss_pred CCCChhhhc----ccCChhcEEECCCCccC-cCCCcccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCC
Confidence 888877532 47889999999999998 45544 78899999999999998888878777776654 67777765
Q ss_pred C
Q 006884 224 P 224 (627)
Q Consensus 224 ~ 224 (627)
+
T Consensus 514 ~ 514 (549)
T 2z81_A 514 P 514 (549)
T ss_dssp H
T ss_pred c
Confidence 4
No 339
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.58 E-value=1.9e-15 Score=147.72 Aligned_cols=146 Identities=16% Similarity=0.197 Sum_probs=123.4
Q ss_pred CCcEEEEEcCCCC-cccccCccccCCCCcccEEEccC-CcCCCCCCCCcCccccccEEeeccccccccCchhhcc-ccc-
Q 006884 68 RSRVIGIHLPGIG-FTGPIPANSIGKLDALKILSLRS-NYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSL-QLN- 143 (627)
Q Consensus 68 ~~~v~~L~l~~~~-l~~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~-~L~- 143 (627)
..+++.|+|++|+ ++ .+++..|.++++|+.|+|++ |+|++..+..|.++++|++|+|++|+++++++ +... +|+
T Consensus 54 l~~L~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 54 LPNISRIYVSIDVTLQ-QLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKMFPD-LTKVYSTDI 131 (239)
T ss_dssp CTTCCEEEEECCSSCC-EECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCSCCC-CTTCCBCCS
T ss_pred CCCCcEEeCCCCCCcc-eeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCccccc-ccccccccc
Confidence 3689999999998 76 56665899999999999998 99997767789999999999999999999654 4443 676
Q ss_pred --eeccccc-cccCCCchhhhcccccc-ccccccccccccCCCC--CCCccceEeccCCC-ccccCCCcCCCC-CCCccc
Q 006884 144 --ALDLSFN-AFTGNIPPGFQNLTRLH-LLNLQNNSISGAIPPL--NLPRLKILNFSNNN-LNGSIPDSLQTF-PNSSFV 215 (627)
Q Consensus 144 --~L~ls~N-~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~-l~~~~p~~~~~~-~~l~~~ 215 (627)
.|++++| ++++..+..|.++++|+ .|++++|+++ .+|.. ..++|+.|++++|+ +++..+..|..+ ++|+.+
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L 210 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLL 210 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEE
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEE
Confidence 9999999 99976666799999999 9999999999 45543 44899999999995 986667788888 888876
Q ss_pred C
Q 006884 216 G 216 (627)
Q Consensus 216 ~ 216 (627)
+
T Consensus 211 ~ 211 (239)
T 2xwt_C 211 D 211 (239)
T ss_dssp E
T ss_pred E
Confidence 5
No 340
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.58 E-value=2.3e-15 Score=138.43 Aligned_cols=126 Identities=23% Similarity=0.295 Sum_probs=108.7
Q ss_pred CCCCcccEEEccCCcCC-CCCCCCcCccccccEEeeccccccccCchhhc-cccceeccccccccCCCchhhhccccccc
Q 006884 91 GKLDALKILSLRSNYLN-GTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALDLSFNAFTGNIPPGFQNLTRLHL 168 (627)
Q Consensus 91 ~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~ 168 (627)
...++|+.|+|++|.++ +.+|..+..+++|++|+|++|.+++. +.+.. .+|+.|+|++|++++.+|..+..+++|++
T Consensus 21 ~~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 21 RTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp SCTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CCcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 34578999999999998 88999999999999999999999998 54444 38999999999999878888889999999
Q ss_pred cccccccccccC--CCC-CCCccceEeccCCCccccCC---CcCCCCCCCcccCC
Q 006884 169 LNLQNNSISGAI--PPL-NLPRLKILNFSNNNLNGSIP---DSLQTFPNSSFVGN 217 (627)
Q Consensus 169 L~l~~N~l~~~~--~~~-~~~~L~~L~l~~N~l~~~~p---~~~~~~~~l~~~~n 217 (627)
|+|++|+|++.. +.. .+++|+.|++++|++++..+ ..+..+++|++++-
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l 154 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDG 154 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETT
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecC
Confidence 999999999754 222 89999999999999995544 37888888888763
No 341
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.56 E-value=5.9e-15 Score=155.25 Aligned_cols=109 Identities=18% Similarity=0.172 Sum_probs=81.8
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhh-c-cccceec
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFR-S-LQLNALD 146 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~-~-~~L~~L~ 146 (627)
.+++.|+|++|++++..+. .|..+++|+.|+|++|.+++..|..|+++++|++|+|++|+++.+++..+ . .+|++|+
T Consensus 69 ~~L~~L~L~~n~i~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTY-AFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCSEEECTTSCCCEECTT-TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccCcEEECCCCcccccChh-hccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEE
Confidence 4677888888887754443 67888888888888888887667777888888888888888887766543 2 3788888
Q ss_pred cccccccCCCchhhhccccccccccccccccc
Q 006884 147 LSFNAFTGNIPPGFQNLTRLHLLNLQNNSISG 178 (627)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 178 (627)
|++|++++..|..|..+++|++|++++|++++
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 179 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 179 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSB
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCc
Confidence 88888877666677778888888888887764
No 342
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.56 E-value=5.6e-16 Score=158.29 Aligned_cols=147 Identities=21% Similarity=0.221 Sum_probs=106.9
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc---ccccee
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS---LQLNAL 145 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~---~~L~~L 145 (627)
..++.|++++|++++.. ...+++|+.|+|++|++++..|..+..+++|++|+|++|.+++..+..+. .+|++|
T Consensus 99 ~~L~~L~l~~n~l~~~~----~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L 174 (317)
T 3o53_A 99 PSIETLHAANNNISRVS----CSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHL 174 (317)
T ss_dssp TTCCEEECCSSCCSEEE----ECCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEE
T ss_pred CCcCEEECCCCccCCcC----ccccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEE
Confidence 44556666666665432 23467888888888888877777888888888888888888887665332 478888
Q ss_pred ccccccccCCCchhhhccccccccccccccccccCCCC-CCCccceEeccCCCccccCCCcCCCCCCCccc---CCCCCC
Q 006884 146 DLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL-NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV---GNSMLC 221 (627)
Q Consensus 146 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~---~n~~l~ 221 (627)
+|++|.|++ +|. ...+++|++|+|++|+|++.++.. .+++|+.|++++|+++ .+|..+..+++|+.+ +|+..|
T Consensus 175 ~L~~N~l~~-~~~-~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~ 251 (317)
T 3o53_A 175 NLQYNFIYD-VKG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHC 251 (317)
T ss_dssp ECTTSCCCE-EEC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBH
T ss_pred ECCCCcCcc-ccc-ccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccC
Confidence 888888885 343 334788888888888888765544 7788888888888888 567777777776654 455554
Q ss_pred C
Q 006884 222 G 222 (627)
Q Consensus 222 ~ 222 (627)
+
T Consensus 252 ~ 252 (317)
T 3o53_A 252 G 252 (317)
T ss_dssp H
T ss_pred c
Confidence 3
No 343
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.56 E-value=7.2e-15 Score=147.99 Aligned_cols=138 Identities=27% Similarity=0.379 Sum_probs=103.2
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc-cccceecc
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALDL 147 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~-~~L~~L~l 147 (627)
.+++.|+|++|++++ +++ +..+++|+.|+|++|.+++ +| .+..+++|++|+|++|++++. +.+.. .+|+.|+|
T Consensus 68 ~~L~~L~L~~n~l~~-~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~-~~l~~l~~L~~L~l 141 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTD-IKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI-NGLVHLPQLESLYL 141 (291)
T ss_dssp TTCCEEECCSSCCCC-CGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC-GGGGGCTTCCEEEC
T ss_pred CCCCEEEccCCccCC-Ccc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC-hhhcCCCCCCEEEc
Confidence 568888888888875 333 7888888888888888874 44 488888888888888888875 33433 37888888
Q ss_pred ccccccCCCchhhhccccccccccccccccccCCCCCCCccceEeccCCCccccCCCcCCCCCCCcccC
Q 006884 148 SFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
++|++++. ..+..+++|+.|+|++|+|++..+-..+++|+.|++++|.+++ +| .+..+++|..++
T Consensus 142 ~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~ 206 (291)
T 1h6t_A 142 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLE 206 (291)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEE
T ss_pred cCCcCCcc--hhhccCCCCCEEEccCCccccchhhcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEE
Confidence 88888854 5678888888888888888876664478888888888888874 44 366677766553
No 344
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.55 E-value=9.6e-15 Score=151.26 Aligned_cols=96 Identities=13% Similarity=0.103 Sum_probs=61.5
Q ss_pred CCccceEeeCC---------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCC-CcCccccccE-Eee
Q 006884 57 SSWIGVTCNVN---------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPS-DITSISSLQY-VYL 125 (627)
Q Consensus 57 ~~w~gv~C~~~---------~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~-L~l 125 (627)
|+|..|.|+.. +.+++.|+|++|+|+ .+|++.|.+|++|+.|+|++|++.+.+|. .|.++++|++ +++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 47899999752 246899999999998 67776899999999999999998665543 3444444432 333
Q ss_pred ccccccccCchhhc--cccceecccccccc
Q 006884 126 QNNYFSGVLPAFRS--LQLNALDLSFNAFT 153 (627)
Q Consensus 126 s~N~l~~~~~~~~~--~~L~~L~ls~N~l~ 153 (627)
++|++++++|..+. .+|++|++++|+|+
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~ 117 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIK 117 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCS
T ss_pred cCCcccccCchhhhhccccccccccccccc
Confidence 44444444443221 13444444444443
No 345
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.55 E-value=9.1e-15 Score=152.10 Aligned_cols=148 Identities=20% Similarity=0.198 Sum_probs=120.7
Q ss_pred cceEeeCCCCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcC-ccccccEEeeccccccccCchh-
Q 006884 60 IGVTCNVNRSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDIT-SISSLQYVYLQNNYFSGVLPAF- 137 (627)
Q Consensus 60 ~gv~C~~~~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~ls~N~l~~~~~~~- 137 (627)
.+-.|.. ..+++++++|+ .+|. .+. +.|+.|+|++|+|++..+..|. ++++|++|+|++|+|+++++..
T Consensus 14 ~~C~C~~-----~~l~c~~~~l~-~iP~-~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~ 84 (361)
T 2xot_A 14 ANCLCAS-----NILSCSKQQLP-NVPQ-SLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAF 84 (361)
T ss_dssp TTCEEET-----TEEECCSSCCS-SCCS-SCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTT
T ss_pred CCCEECC-----CEEEeCCCCcC-ccCc-cCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhc
Confidence 3456653 36899999998 5777 343 4689999999999977777787 9999999999999999998864
Q ss_pred hc-cccceeccccccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCCCcC---CCCCC
Q 006884 138 RS-LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSL---QTFPN 211 (627)
Q Consensus 138 ~~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~---~~~~~ 211 (627)
.. .+|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..|.. .+++|+.|+|++|+|++..+..+ ..+++
T Consensus 85 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~ 164 (361)
T 2xot_A 85 VPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPK 164 (361)
T ss_dssp TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTT
T ss_pred cCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCc
Confidence 33 38999999999999777778999999999999999999876654 89999999999999995444444 56777
Q ss_pred CcccC
Q 006884 212 SSFVG 216 (627)
Q Consensus 212 l~~~~ 216 (627)
|..++
T Consensus 165 L~~L~ 169 (361)
T 2xot_A 165 LMLLD 169 (361)
T ss_dssp CCEEE
T ss_pred CCEEE
Confidence 77664
No 346
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.54 E-value=8.5e-15 Score=138.48 Aligned_cols=127 Identities=19% Similarity=0.290 Sum_probs=107.1
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchh-hc-cccceec
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAF-RS-LQLNALD 146 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~-~~-~~L~~L~ 146 (627)
.+++.|+|++|.++ .++ .+..+++|+.|+|++|.+++..|..|..+++|++|+|++|++++..+.. .. .+|+.|+
T Consensus 66 ~~L~~L~l~~n~~~--~~~-~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~ 142 (197)
T 4ezg_A 66 HNIKDLTINNIHAT--NYN-PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSID 142 (197)
T ss_dssp TTCSEEEEESCCCS--CCG-GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEE
T ss_pred CCCCEEEccCCCCC--cch-hhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEE
Confidence 57999999999775 333 6999999999999999999888999999999999999999999866653 33 3899999
Q ss_pred ccccc-ccCCCchhhhccccccccccccccccccCCCCCCCccceEeccCCCccc
Q 006884 147 LSFNA-FTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNG 200 (627)
Q Consensus 147 ls~N~-l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~ 200 (627)
|++|. ++ .+| .+..+++|+.|++++|++++..+-..+++|+.|++++|++.+
T Consensus 143 L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 143 LSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCTTGGGCSSCCEEEECBC----
T ss_pred ccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcChHHhccCCCCCEEEeeCcccCC
Confidence 99998 66 566 699999999999999999975433489999999999999863
No 347
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.53 E-value=4.7e-15 Score=164.02 Aligned_cols=144 Identities=18% Similarity=0.136 Sum_probs=121.5
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhh-c-ccccee
Q 006884 68 RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFR-S-LQLNAL 145 (627)
Q Consensus 68 ~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~-~-~~L~~L 145 (627)
+.+++.|+|++|++++..+. .|.++++|+.|+|++|++++..|..|.++++|++|+|++|++++.+|..+ . .+|++|
T Consensus 27 ~~~l~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (570)
T 2z63_A 27 PFSTKNLDLSFNPLRHLGSY-SFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKL 105 (570)
T ss_dssp CSSCCEEECCSCCCCEECTT-TTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEE
T ss_pred cccccEEEccCCccCccChh-HhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccc
Confidence 35789999999999865554 79999999999999999998778889999999999999999999887543 3 389999
Q ss_pred ccccccccCCCchhhhccccccccccccccccc-cCCCC--CCCccceEeccCCCccccCCCcCCCCCCC
Q 006884 146 DLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISG-AIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNS 212 (627)
Q Consensus 146 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l 212 (627)
+|++|++++..+..|+++++|++|++++|++++ .+|.. .+++|+.|++++|++++..|..++.+++|
T Consensus 106 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 175 (570)
T 2z63_A 106 VAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175 (570)
T ss_dssp ECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTC
T ss_pred cccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhcc
Confidence 999999996555579999999999999999987 35653 78999999999999998777777766665
No 348
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.53 E-value=1.3e-14 Score=147.35 Aligned_cols=138 Identities=27% Similarity=0.427 Sum_probs=98.0
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc-cccceecc
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALDL 147 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~-~~L~~L~l 147 (627)
.+++.|+|++|++++ ++. +..+++|+.|+|++|.+++ +| .+..+++|++|+|++|++++.++ +.. .+|+.|+|
T Consensus 63 ~~L~~L~L~~n~i~~-~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l 136 (308)
T 1h6u_A 63 NNLIGLELKDNQITD-LAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITDVTP-LAGLSNLQVLYL 136 (308)
T ss_dssp TTCCEEECCSSCCCC-CGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCCCGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCC-Chh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCCchh-hcCCCCCCEEEC
Confidence 568888888888874 433 7788888888888888874 34 57778888888888888877654 333 36888888
Q ss_pred ccccccCCCchhhhccccccccccccccccccCCCCCCCccceEeccCCCccccCCCcCCCCCCCcccC
Q 006884 148 SFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
++|++++. +. +..+++|+.|+|++|++++..+-..+++|+.|++++|++++..+ +..+++|+.++
T Consensus 137 ~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~ 201 (308)
T 1h6u_A 137 DLNQITNI-SP-LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP--LASLPNLIEVH 201 (308)
T ss_dssp CSSCCCCC-GG-GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEE
T ss_pred CCCccCcC-cc-ccCCCCccEEEccCCcCCCChhhcCCCCCCEEECCCCccCcChh--hcCCCCCCEEE
Confidence 88888753 33 77778888888888887765443477778888888888774433 56666666553
No 349
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.53 E-value=9.1e-17 Score=152.26 Aligned_cols=144 Identities=22% Similarity=0.344 Sum_probs=119.2
Q ss_pred cEEEEEcCCCCcccccCc-----cccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc-cccc
Q 006884 70 RVIGIHLPGIGFTGPIPA-----NSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLN 143 (627)
Q Consensus 70 ~v~~L~l~~~~l~~~~~~-----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~-~~L~ 143 (627)
.|+.++++.+++.|.+|. ..+..+++|+.|+|++|.|++ +| .+..+++|++|+|++|+++.+++.+.. .+|+
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l~~~~~~~~~L~ 96 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKIENLDAVADTLE 96 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSCSSHHHHHHHCS
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcccccchhhcCCcCC
Confidence 455566666666666553 268899999999999999996 78 899999999999999999976654444 4899
Q ss_pred eeccccccccCCCchhhhccccccccccccccccccCC--C-CCCCccceEeccCCCccccCCCc----------CCCCC
Q 006884 144 ALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIP--P-LNLPRLKILNFSNNNLNGSIPDS----------LQTFP 210 (627)
Q Consensus 144 ~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~--~-~~~~~L~~L~l~~N~l~~~~p~~----------~~~~~ 210 (627)
.|+|++|+|++ +| .+..+++|+.|++++|+|++..+ . ..+++|++|++++|++++.+|.. +..++
T Consensus 97 ~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~ 174 (198)
T 1ds9_A 97 ELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLP 174 (198)
T ss_dssp EEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCS
T ss_pred EEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCC
Confidence 99999999996 66 69999999999999999986433 2 38999999999999999887764 77888
Q ss_pred CCcccCC
Q 006884 211 NSSFVGN 217 (627)
Q Consensus 211 ~l~~~~n 217 (627)
+|+.++.
T Consensus 175 ~L~~Ld~ 181 (198)
T 1ds9_A 175 NLKKLDG 181 (198)
T ss_dssp SCSEECC
T ss_pred CcEEECC
Confidence 8888864
No 350
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.53 E-value=4e-15 Score=162.74 Aligned_cols=139 Identities=23% Similarity=0.291 Sum_probs=121.4
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhccccceeccc
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQLNALDLS 148 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~L~~L~ls 148 (627)
.+++.|+|++|++++..|. .|.++++|+.|+|++|+|++..|..|.++++|++|+|++|+++++++. ...+|++|+|+
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~-~l~~L~~L~L~ 98 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTS-DILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCH-PTVNLKHLDLS 98 (520)
T ss_dssp TTCSEEECCSSCCCCCCHH-HHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEEECC-CCCCCSEEECC
T ss_pred ccccEEECCCCcccccChh-hccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceeecCcc-ccCCccEEecc
Confidence 6799999999999965555 899999999999999999988899999999999999999999976655 44589999999
Q ss_pred cccccC-CCchhhhccccccccccccccccccCCCCCCCcc--ceEeccCCCc--cccCCCcCCCCC
Q 006884 149 FNAFTG-NIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRL--KILNFSNNNL--NGSIPDSLQTFP 210 (627)
Q Consensus 149 ~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L--~~L~l~~N~l--~~~~p~~~~~~~ 210 (627)
+|+|++ .+|..|+++++|++|++++|+|++. ....+++| +.|++++|.+ ++..|..+..+.
T Consensus 99 ~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~-~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~ 164 (520)
T 2z7x_B 99 FNAFDALPICKEFGNMSQLKFLGLSTTHLEKS-SVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFN 164 (520)
T ss_dssp SSCCSSCCCCGGGGGCTTCCEEEEEESSCCGG-GGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCC
T ss_pred CCccccccchhhhccCCcceEEEecCcccchh-hccccccceeeEEEeecccccccccccccccccc
Confidence 999997 4789999999999999999999862 22366777 9999999999 888888887766
No 351
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.53 E-value=1.4e-14 Score=145.81 Aligned_cols=137 Identities=23% Similarity=0.377 Sum_probs=117.5
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc-cccceecc
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALDL 147 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~-~~L~~L~l 147 (627)
.+++.|++++|++. .++ .+..+++|+.|+|++|++++..| +..+++|++|+|++|++++..+ +.. .+|+.|+|
T Consensus 46 ~~L~~L~l~~~~i~-~~~--~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L 119 (291)
T 1h6t_A 46 NSIDQIIANNSDIK-SVQ--GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDLSS-LKDLKKLKSLSL 119 (291)
T ss_dssp HTCCEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCGGG-GTTCTTCCEEEC
T ss_pred CcccEEEccCCCcc-cCh--hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCChh-hccCCCCCEEEC
Confidence 56999999999998 454 48999999999999999996544 9999999999999999998644 444 48999999
Q ss_pred ccccccCCCchhhhccccccccccccccccccCCCC-CCCccceEeccCCCccccCCCcCCCCCCCcccC
Q 006884 148 SFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL-NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
++|++++ + ..+..+++|+.|++++|++++. +.. .+++|+.|++++|++++..| +..+++|+.++
T Consensus 120 ~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~ 184 (291)
T 1h6t_A 120 EHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLY 184 (291)
T ss_dssp TTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred CCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh--hcCCCccCEEE
Confidence 9999996 4 4689999999999999999976 433 89999999999999997655 88888888765
No 352
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.53 E-value=1.7e-14 Score=146.60 Aligned_cols=122 Identities=25% Similarity=0.396 Sum_probs=58.3
Q ss_pred cEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc-cccceeccc
Q 006884 70 RVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALDLS 148 (627)
Q Consensus 70 ~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~-~~L~~L~ls 148 (627)
+++.|++++|+++ .+| .+..+++|+.|+|++|.+++ +|. +..+++|++|+|++|++++.. .+.. .+|+.|+|+
T Consensus 42 ~L~~L~l~~~~i~-~l~--~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~~~-~~~~l~~L~~L~l~ 115 (308)
T 1h6u_A 42 GITTLSAFGTGVT-TIE--GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKNVS-AIAGLQSIKTLDLT 115 (308)
T ss_dssp TCCEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSCCG-GGTTCTTCCEEECT
T ss_pred CcCEEEeeCCCcc-Cch--hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCCch-hhcCCCCCCEEECC
Confidence 3455555555554 233 24455555555555555553 222 555555555555555555432 2222 245555555
Q ss_pred cccccCCCchhhhccccccccccccccccccCCCCCCCccceEeccCCCcc
Q 006884 149 FNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLN 199 (627)
Q Consensus 149 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~ 199 (627)
+|++++ +|. +..+++|+.|++++|++++..+-..+++|+.|++++|+++
T Consensus 116 ~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~ 164 (308)
T 1h6u_A 116 STQITD-VTP-LAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVS 164 (308)
T ss_dssp TSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCCCCC-chh-hcCCCCCCEEECCCCccCcCccccCCCCccEEEccCCcCC
Confidence 555553 222 4555555555555555554333224455555555555554
No 353
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.52 E-value=5.2e-15 Score=151.07 Aligned_cols=142 Identities=19% Similarity=0.151 Sum_probs=116.0
Q ss_pred eCCCCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhh-c-ccc
Q 006884 65 NVNRSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFR-S-LQL 142 (627)
Q Consensus 65 ~~~~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~-~-~~L 142 (627)
.....+++.|+|++|.+++ +...++|+.|+|++|.+++..+.. +++|++|+|++|++++..+..+ . .+|
T Consensus 76 ~~~l~~L~~L~Ls~n~l~~------l~~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L 146 (317)
T 3o53_A 76 LESLSTLRTLDLNNNYVQE------LLVGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRV 146 (317)
T ss_dssp ETTCTTCCEEECCSSEEEE------EEECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSE
T ss_pred hhhcCCCCEEECcCCcccc------ccCCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCC
Confidence 3445789999999999983 334489999999999999665543 6789999999999999887543 3 489
Q ss_pred ceeccccccccCCCchhhh-ccccccccccccccccccCCCCCCCccceEeccCCCccccCCCcCCCCCCCcccC
Q 006884 143 NALDLSFNAFTGNIPPGFQ-NLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 143 ~~L~ls~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
+.|+|++|.+++..|..+. .+++|++|+|++|+|++..+...+++|+.|++++|++++ +|..+..+++|+.++
T Consensus 147 ~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~ 220 (317)
T 3o53_A 147 QYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWIS 220 (317)
T ss_dssp EEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEE
T ss_pred CEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccccccccccCCEEECCCCcCCc-chhhhcccCcccEEE
Confidence 9999999999987777764 789999999999999977555579999999999999995 555588888887764
No 354
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.52 E-value=1.1e-14 Score=148.14 Aligned_cols=147 Identities=18% Similarity=0.124 Sum_probs=109.6
Q ss_pred CcEEEEEcCCCCcccccCcccc--CCCCcccEEEccCCcCCCCCC----CCcCccccccEEeeccccccccCchhhc--c
Q 006884 69 SRVIGIHLPGIGFTGPIPANSI--GKLDALKILSLRSNYLNGTLP----SDITSISSLQYVYLQNNYFSGVLPAFRS--L 140 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~--~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~ls~N~l~~~~~~~~~--~ 140 (627)
.+++.|+|++|++++..|. .+ ..+++|+.|+|++|.+++..| ..+..+++|++|+|++|++++.++..+. .
T Consensus 91 ~~L~~L~l~~n~l~~~~~~-~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 169 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPP-LPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFP 169 (310)
T ss_dssp SCCCEEEEESCCCBSCCCC-CSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCT
T ss_pred CceeEEEeeCCEeccchhh-hhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCC
Confidence 3488889988988888887 55 888889999999998887655 3445688889999999998888775433 3
Q ss_pred ccceeccccccccCC--Cc--hhhhccccccccccccccccccCCC-----CCCCccceEeccCCCccccCCCcCCCC--
Q 006884 141 QLNALDLSFNAFTGN--IP--PGFQNLTRLHLLNLQNNSISGAIPP-----LNLPRLKILNFSNNNLNGSIPDSLQTF-- 209 (627)
Q Consensus 141 ~L~~L~ls~N~l~~~--~p--~~~~~l~~L~~L~l~~N~l~~~~~~-----~~~~~L~~L~l~~N~l~~~~p~~~~~~-- 209 (627)
+|++|+|++|++.+. ++ ..+..+++|++|+|++|+|+...+. ..+++|++|+|++|++++..|..+..+
T Consensus 170 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 249 (310)
T 4glp_A 170 ALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMW 249 (310)
T ss_dssp TCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCC
T ss_pred CCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccC
Confidence 788999999887652 22 2346788889999999988742221 156888899999999888778777666
Q ss_pred -CCCcccC
Q 006884 210 -PNSSFVG 216 (627)
Q Consensus 210 -~~l~~~~ 216 (627)
++|+.++
T Consensus 250 ~~~L~~L~ 257 (310)
T 4glp_A 250 SSALNSLN 257 (310)
T ss_dssp CTTCCCEE
T ss_pred cCcCCEEE
Confidence 4665553
No 355
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.52 E-value=2.2e-15 Score=156.33 Aligned_cols=146 Identities=19% Similarity=0.218 Sum_probs=121.2
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCc-h-hhc-cccce
Q 006884 68 RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLP-A-FRS-LQLNA 144 (627)
Q Consensus 68 ~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~-~-~~~-~~L~~ 144 (627)
-.+++.|+|++|++++..|. .|.++++|+.|+|++|+|++..+..|.++++|++|+|++|+++++++ . +.. .+|++
T Consensus 75 l~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~ 153 (353)
T 2z80_A 75 CVNLQALVLTSNGINTIEED-SFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQI 153 (353)
T ss_dssp CTTCCEEECTTSCCCEECTT-TTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCE
T ss_pred CCCCCEEECCCCccCccCHh-hcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcE
Confidence 46899999999999975555 89999999999999999995444448999999999999999998877 3 333 48999
Q ss_pred eccccc-cccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCCC-cCCCCCCCccc
Q 006884 145 LDLSFN-AFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPD-SLQTFPNSSFV 215 (627)
Q Consensus 145 L~ls~N-~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~-~~~~~~~l~~~ 215 (627)
|++++| .+++..|..|.++++|++|++++|++++..|.. .+++|++|++++|+++ .+|. .+..+++|+.+
T Consensus 154 L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L 227 (353)
T 2z80_A 154 LRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECL 227 (353)
T ss_dssp EEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEE
T ss_pred EECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEE
Confidence 999999 577666788999999999999999999887764 8999999999999997 4443 33345666554
No 356
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.52 E-value=1.2e-14 Score=160.46 Aligned_cols=139 Identities=23% Similarity=0.255 Sum_probs=117.6
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhccccceeccc
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQLNALDLS 148 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~L~~L~ls 148 (627)
.+++.|+|++|++++..|. .|.++++|+.|+|++|+|++..|..|.++++|++|+|++|+++.+++. ...+|++|+|+
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~-~l~~L~~L~Ls 129 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMP-DISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNISCC-PMASLRHLDLS 129 (562)
T ss_dssp TTCCEEECCSSCCCCCCGG-GTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCEECSC-CCTTCSEEECC
T ss_pred CCcCEEECCCCCccccChh-hhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCccCcc-ccccCCEEECC
Confidence 6799999999999955444 899999999999999999988899999999999999999999976665 34589999999
Q ss_pred cccccC-CCchhhhccccccccccccccccccCCCCCCCcc--ceEeccCCCc--cccCCCcCCCCC
Q 006884 149 FNAFTG-NIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRL--KILNFSNNNL--NGSIPDSLQTFP 210 (627)
Q Consensus 149 ~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L--~~L~l~~N~l--~~~~p~~~~~~~ 210 (627)
+|++++ .+|..|+++++|++|+|++|++++. ....+++| +.|++++|.+ ++..|..+..+.
T Consensus 130 ~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~-~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~ 195 (562)
T 3a79_B 130 FNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL-DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPN 195 (562)
T ss_dssp SSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT-TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECC
T ss_pred CCCccccCchHhhcccCcccEEecCCCccccC-chhhhhhceeeEEEeecccccccccCcccccccC
Confidence 999996 3568999999999999999999862 22255555 9999999999 888888877765
No 357
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.51 E-value=1.7e-15 Score=171.56 Aligned_cols=140 Identities=24% Similarity=0.298 Sum_probs=118.2
Q ss_pred CCCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhcc-cccee
Q 006884 67 NRSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSL-QLNAL 145 (627)
Q Consensus 67 ~~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~-~L~~L 145 (627)
....++.|+|++|.+. .+|. .+.++++|+.|+|++|.|+ .+|..|++|++|++|+|++|+|+.++..+..+ +|++|
T Consensus 222 ~l~~L~~L~Ls~n~l~-~l~~-~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L 298 (727)
T 4b8c_D 222 DDQLWHALDLSNLQIF-NISA-NIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYF 298 (727)
T ss_dssp CCCCCCEEECTTSCCS-CCCG-GGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEE
T ss_pred cCCCCcEEECCCCCCC-CCCh-hhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEE
Confidence 3467999999999998 8888 5779999999999999999 89999999999999999999999765566554 89999
Q ss_pred ccccccccCCCchhhhccccccccccccccccccCCCC--CC-CccceEeccCCCccccCCCcCCCCC
Q 006884 146 DLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NL-PRLKILNFSNNNLNGSIPDSLQTFP 210 (627)
Q Consensus 146 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~-~~L~~L~l~~N~l~~~~p~~~~~~~ 210 (627)
+|++|.|+ .+|..|++|++|+.|+|++|+|++.+|.. .+ ..+..|+|++|.++|.+|..+..+.
T Consensus 299 ~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~~l~ 365 (727)
T 4b8c_D 299 YFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERRFIE 365 (727)
T ss_dssp ECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-----
T ss_pred ECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccccceeE
Confidence 99999998 78999999999999999999999988764 12 1223578999999999998776553
No 358
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.51 E-value=2.7e-14 Score=157.79 Aligned_cols=139 Identities=26% Similarity=0.342 Sum_probs=118.4
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc-cccceec
Q 006884 68 RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALD 146 (627)
Q Consensus 68 ~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~-~~L~~L~ 146 (627)
..+++.|+|++|++.+. ++ +..+++|+.|+|++|.|++ +| .+..+++|++|+|++|+++++ +.+.. .+|+.|+
T Consensus 64 l~~L~~L~Ls~N~l~~~-~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~ 137 (605)
T 1m9s_A 64 LPNVTKLFLNGNKLTDI-KP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISDI-NGLVHLPQLESLY 137 (605)
T ss_dssp CTTCCEEECTTSCCCCC-GG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCCC-GGGGGCTTCSEEE
T ss_pred CCCCCEEEeeCCCCCCC-hh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCCC-ccccCCCccCEEE
Confidence 36799999999999854 43 8999999999999999984 44 799999999999999999986 44444 4899999
Q ss_pred cccccccCCCchhhhccccccccccccccccccCCCCCCCccceEeccCCCccccCCCcCCCCCCCcccC
Q 006884 147 LSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
|++|+|++. ..|..+++|+.|+|++|+|++.+|...+++|+.|+|++|+|++. | .+..+++|..++
T Consensus 138 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~ 203 (605)
T 1m9s_A 138 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLE 203 (605)
T ss_dssp CCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEE
T ss_pred CCCCccCCc--hhhcccCCCCEEECcCCcCCCchhhccCCCCCEEECcCCCCCCC-h-HHccCCCCCEEE
Confidence 999999964 67999999999999999999887755899999999999999864 3 577788877664
No 359
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.51 E-value=1.4e-14 Score=134.27 Aligned_cols=125 Identities=17% Similarity=0.299 Sum_probs=102.9
Q ss_pred CcEEEEEcCCCCcccccCccccCCCC-cccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchh-hc-ccccee
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLD-ALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAF-RS-LQLNAL 145 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~-~~-~~L~~L 145 (627)
..++.|+|++|+++ .+|. +..+. +|+.|+|++|.|++. ..|..+++|++|+|++|+++++++.. .. .+|++|
T Consensus 19 ~~L~~L~l~~n~l~-~i~~--~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 19 VRDRELDLRGYKIP-VIEN--LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 93 (176)
T ss_dssp TSCEEEECTTSCCC-SCCC--GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred CCceEEEeeCCCCc-hhHH--hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEE
Confidence 57899999999998 4554 55544 999999999999964 67899999999999999999887765 33 489999
Q ss_pred ccccccccCCCch--hhhccccccccccccccccccCCC----C-CCCccceEeccCCCcc
Q 006884 146 DLSFNAFTGNIPP--GFQNLTRLHLLNLQNNSISGAIPP----L-NLPRLKILNFSNNNLN 199 (627)
Q Consensus 146 ~ls~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~~~----~-~~~~L~~L~l~~N~l~ 199 (627)
+|++|+|+ .+|. .+..+++|+.|++++|+++...+. . .+++|+.|++++|.+.
T Consensus 94 ~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 94 ILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp ECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 99999997 5776 788999999999999999854332 2 7889999999999876
No 360
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.49 E-value=2.9e-14 Score=156.66 Aligned_cols=117 Identities=26% Similarity=0.284 Sum_probs=71.8
Q ss_pred EEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhcc-ccceecccc
Q 006884 71 VIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSL-QLNALDLSF 149 (627)
Q Consensus 71 v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~-~L~~L~ls~ 149 (627)
++.|+|++|+|++ +|. |+.|++|+.|+|++|.|+ .+|..|+.+++|++|+|++|+|++++ .+..+ +|+.|+|++
T Consensus 443 L~~L~Ls~n~l~~-lp~--~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp-~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH--LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENVD-GVANLPRLQELLLCN 517 (567)
T ss_dssp CSEEECTTSCCSS-CCC--GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCG-GGTTCSSCCEEECCS
T ss_pred ceEEEecCCCCCC-CcC--ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCCCc-ccCCCCCCcEEECCC
Confidence 5556666666664 443 666666666666666666 56666666666666666666666643 33332 566666666
Q ss_pred ccccCCC-chhhhccccccccccccccccccCCCC-----CCCccceEe
Q 006884 150 NAFTGNI-PPGFQNLTRLHLLNLQNNSISGAIPPL-----NLPRLKILN 192 (627)
Q Consensus 150 N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~~~~-----~~~~L~~L~ 192 (627)
|+|++.. |..|+.+++|+.|+|++|+|++.+|.. .+++|+.|+
T Consensus 518 N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~ 566 (567)
T 1dce_A 518 NRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSIL 566 (567)
T ss_dssp SCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEE
T ss_pred CCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccC
Confidence 6666554 666666666666666666666555432 255666554
No 361
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.46 E-value=1.3e-13 Score=126.94 Aligned_cols=105 Identities=23% Similarity=0.272 Sum_probs=83.5
Q ss_pred EEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhh-c-cccceecccc
Q 006884 72 IGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFR-S-LQLNALDLSF 149 (627)
Q Consensus 72 ~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~-~-~~L~~L~ls~ 149 (627)
+.|++++|+++ .+|. .+ .++|+.|+|++|+|++..|..|.++++|++|+|++|+|+++++..+ . .+|++|+|++
T Consensus 12 ~~l~~s~n~l~-~ip~-~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPT-GI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TEEECTTSCCS-SCCS-CC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCc-cC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 46788888888 5776 34 3889999999999998888889999999999999999998877643 3 3788888888
Q ss_pred ccccCCCchhhhccccccccccccccccccC
Q 006884 150 NAFTGNIPPGFQNLTRLHLLNLQNNSISGAI 180 (627)
Q Consensus 150 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 180 (627)
|+|++..|..|..+++|+.|+|++|.++...
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 8888655556777888888888888776543
No 362
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.46 E-value=5.3e-14 Score=155.50 Aligned_cols=137 Identities=23% Similarity=0.386 Sum_probs=118.1
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc-cccceecc
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALDL 147 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~-~~L~~L~l 147 (627)
.+++.|+|++|++. .++ .+..|++|+.|+|++|.|++..| +..+++|++|+|++|.|++++ .+.. .+|+.|+|
T Consensus 43 ~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-~l~~l~~L~~L~L 116 (605)
T 1m9s_A 43 NSIDQIIANNSDIK-SVQ--GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDLS-SLKDLKKLKSLSL 116 (605)
T ss_dssp TTCCCCBCTTCCCC-CCT--TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCT-TSTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCC-CCh--HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCCh-hhccCCCCCEEEe
Confidence 57899999999998 455 48999999999999999996554 999999999999999999864 4444 48999999
Q ss_pred ccccccCCCchhhhccccccccccccccccccCCCC-CCCccceEeccCCCccccCCCcCCCCCCCcccC
Q 006884 148 SFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL-NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
++|+|++ + ..+..|++|+.|+|++|+|++. +.. .+++|+.|+|++|+|++..| +..+++|..++
T Consensus 117 s~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 181 (605)
T 1m9s_A 117 EHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLY 181 (605)
T ss_dssp TTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred cCCCCCC-C-ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEE
Confidence 9999996 4 4699999999999999999976 433 89999999999999997766 88888887764
No 363
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.46 E-value=9.9e-14 Score=149.50 Aligned_cols=138 Identities=27% Similarity=0.373 Sum_probs=94.4
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhccccceeccc
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQLNALDLS 148 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~L~~L~ls 148 (627)
.+++.|+|++|++++ ++ .+..+++|+.|+|++|.+++..| +..+++|++|+|++|.+++.++-....+|+.|+|+
T Consensus 221 ~~L~~L~l~~n~l~~-~~--~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~ 295 (466)
T 1o6v_A 221 TNLDELSLNGNQLKD-IG--TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELN 295 (466)
T ss_dssp TTCCEEECCSSCCCC-CG--GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECC
T ss_pred CCCCEEECCCCCccc-ch--hhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCccccccCCCccCeEEcC
Confidence 567888888888774 32 47777788888888888775544 77777778888877777776652222367777777
Q ss_pred cccccCCCchhhhccccccccccccccccccCCCCCCCccceEeccCCCccccCCCcCCCCCCCccc
Q 006884 149 FNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV 215 (627)
Q Consensus 149 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~ 215 (627)
+|++++..| +..+++|+.|+|++|++++..|...+++|+.|++++|++++. ..+.++++|+.+
T Consensus 296 ~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 358 (466)
T 1o6v_A 296 ENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV--SSLANLTNINWL 358 (466)
T ss_dssp SSCCSCCGG--GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEE
T ss_pred CCcccCchh--hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccCCc--hhhccCCCCCEE
Confidence 777775433 667777777777777777665544677777777777777654 345566666554
No 364
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.45 E-value=1.1e-13 Score=151.39 Aligned_cols=118 Identities=25% Similarity=0.361 Sum_probs=81.5
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhccccceeccc
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQLNALDLS 148 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~L~~L~ls 148 (627)
.+++.|+|++|+|+ .+| ..+++|+.|+|++|+|++ +|. +.+ +|++|+|++|+|+++++ ...+|+.|+|+
T Consensus 80 ~~L~~L~Ls~N~l~-~ip----~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~lp~--~l~~L~~L~Ls 148 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP----ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTMLPE--LPALLEYINAD 148 (571)
T ss_dssp TTCSEEECCSSCCS-CCC----CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSCCCC--CCTTCCEEECC
T ss_pred CCCCEEECcCCCCc-ccc----cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCCCCC--cCccccEEeCC
Confidence 46788888888887 566 346778888888888875 666 554 77777888877777544 33467777777
Q ss_pred cccccCCCchhhhccccccccccccccccccCCCCCCCccceEeccCCCccccCCC
Q 006884 149 FNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSIPD 204 (627)
Q Consensus 149 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~ 204 (627)
+|+|++ +|. .+++|+.|+|++|+|++ +|... ++|+.|+|++|+|+ .+|.
T Consensus 149 ~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~l~-~~L~~L~Ls~N~L~-~lp~ 197 (571)
T 3cvr_A 149 NNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPELP-ESLEALDVSTNLLE-SLPA 197 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCCCC-TTCCEEECCSSCCS-SCCC
T ss_pred CCccCc-CCC---cCCCcCEEECCCCCCCC-cchhh-CCCCEEECcCCCCC-chhh
Confidence 777775 554 45677777777777776 44333 66777777777776 5555
No 365
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=1.4e-13 Score=127.29 Aligned_cols=105 Identities=24% Similarity=0.291 Sum_probs=85.6
Q ss_pred EEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhh-c-cccceecccc
Q 006884 72 IGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFR-S-LQLNALDLSF 149 (627)
Q Consensus 72 ~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~-~-~~L~~L~ls~ 149 (627)
+.+++++|+++ .+|. .+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|+++++..+ . .+|+.|+|++
T Consensus 15 ~~l~~~~n~l~-~iP~-~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPA-GIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCCS-SCCS-CCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCCC-ccCC-CcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 57899999996 7887 443 889999999999998889899999999999999999998877643 3 3788888888
Q ss_pred ccccCCCchhhhccccccccccccccccccC
Q 006884 150 NAFTGNIPPGFQNLTRLHLLNLQNNSISGAI 180 (627)
Q Consensus 150 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 180 (627)
|+|++..+..|..+++|+.|+|++|.+....
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 8888655555888888888888888877543
No 366
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.45 E-value=1.8e-13 Score=125.99 Aligned_cols=105 Identities=26% Similarity=0.307 Sum_probs=91.4
Q ss_pred ccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc--cccceeccccccccCCCchhhhcccccccccccc
Q 006884 96 LKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQN 173 (627)
Q Consensus 96 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~ 173 (627)
.+.|++++|.|+ .+|..+. ++|++|+|++|+|++++|..+. .+|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 468999999999 6888774 8999999999999999886443 3899999999999977777789999999999999
Q ss_pred ccccccCCCC--CCCccceEeccCCCccccCC
Q 006884 174 NSISGAIPPL--NLPRLKILNFSNNNLNGSIP 203 (627)
Q Consensus 174 N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p 203 (627)
|+|++..+.. .+++|+.|+|++|+++...+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9999877753 89999999999999985543
No 367
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.44 E-value=5.1e-14 Score=130.51 Aligned_cols=125 Identities=18% Similarity=0.143 Sum_probs=103.6
Q ss_pred ccCCCCcccEEEccCCcCCCCCCCCcCccc-cccEEeeccccccccCchhhc-cccceeccccccccCCCchhhhccccc
Q 006884 89 SIGKLDALKILSLRSNYLNGTLPSDITSIS-SLQYVYLQNNYFSGVLPAFRS-LQLNALDLSFNAFTGNIPPGFQNLTRL 166 (627)
Q Consensus 89 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~ls~N~l~~~~~~~~~-~~L~~L~ls~N~l~~~~p~~~~~l~~L 166 (627)
.+.++++|+.|+|++|+++ .+|. +..+. +|++|+|++|.++++ +.+.. .+|++|+|++|+|++..|..|..+++|
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 4778999999999999999 5664 66655 999999999999987 55544 389999999999996544566999999
Q ss_pred cccccccccccccCC--CC-CCCccceEeccCCCccccCCCc----CCCCCCCcccCC
Q 006884 167 HLLNLQNNSISGAIP--PL-NLPRLKILNFSNNNLNGSIPDS----LQTFPNSSFVGN 217 (627)
Q Consensus 167 ~~L~l~~N~l~~~~~--~~-~~~~L~~L~l~~N~l~~~~p~~----~~~~~~l~~~~n 217 (627)
++|+|++|+|+...+ .. .+++|+.|++++|+++ .+|.. +..+++|++++.
T Consensus 91 ~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~ 147 (176)
T 1a9n_A 91 TELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDF 147 (176)
T ss_dssp CEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETT
T ss_pred CEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCC
Confidence 999999999975333 22 7899999999999998 66764 888888888764
No 368
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.44 E-value=1.5e-13 Score=136.03 Aligned_cols=125 Identities=21% Similarity=0.307 Sum_probs=106.3
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc-cccceec
Q 006884 68 RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALD 146 (627)
Q Consensus 68 ~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~-~~L~~L~ 146 (627)
..+++.|+|++|++++ +++ +..+++|+.|+|++|++++ +|. +.. ++|++|+|++|++++.. .+.. .+|+.|+
T Consensus 62 l~~L~~L~L~~N~i~~-~~~--l~~l~~L~~L~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~~~-~l~~l~~L~~L~ 134 (263)
T 1xeu_A 62 FTNLKELHLSHNQISD-LSP--LKDLTKLEELSVNRNRLKN-LNG-IPS-ACLSRLFLDNNELRDTD-SLIHLKNLEILS 134 (263)
T ss_dssp CTTCCEEECCSSCCCC-CGG--GTTCSSCCEEECCSSCCSC-CTT-CCC-SSCCEEECCSSCCSBSG-GGTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCC-Chh--hccCCCCCEEECCCCccCC-cCc-ccc-CcccEEEccCCccCCCh-hhcCcccccEEE
Confidence 3689999999999995 444 8999999999999999995 554 333 99999999999999964 4444 4899999
Q ss_pred cccccccCCCchhhhccccccccccccccccccCCCCCCCccceEeccCCCcccc
Q 006884 147 LSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGS 201 (627)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~ 201 (627)
|++|+|++ +| .+..+++|+.|+|++|+|++...-..+++|+.|++++|++++.
T Consensus 135 Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 135 IRNNKLKS-IV-MLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CTTSCCCB-CG-GGGGCTTCCEEECTTSCCCBCTTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCCcCCC-Ch-HHccCCCCCEEECCCCcCcchHHhccCCCCCEEeCCCCcccCC
Confidence 99999996 45 6999999999999999999872223899999999999999855
No 369
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.42 E-value=2.7e-14 Score=153.04 Aligned_cols=135 Identities=19% Similarity=0.176 Sum_probs=75.4
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccc-------------cEEeeccccccccCc
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSL-------------QYVYLQNNYFSGVLP 135 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L-------------~~L~ls~N~l~~~~~ 135 (627)
.+++.|++++|++ |.+|. .+++|++|+.|+|++|.++|.+|..++++++| ++|++++|.+++++.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~-~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPV-EAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPE 88 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCS
T ss_pred ccchhhhcccCch-hhCCh-hHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCC
Confidence 5788999999999 78988 78999999999999999998999999888765 888888888887654
Q ss_pred hhhccccceeccccccccCCCchhhhccccccccccccccccccCCCCCCCccceEeccCCCccccCCCcCCCCCCCccc
Q 006884 136 AFRSLQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV 215 (627)
Q Consensus 136 ~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~ 215 (627)
...+|+.|++++|.+++ +|.. +++|+.|++++|++++. |.. .++|++|++++|++++ +| .++++++|+++
T Consensus 89 --~~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l-~~~-~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L 158 (454)
T 1jl5_A 89 --LPPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL-SDL-PPLLEYLGVSNNQLEK-LP-ELQNSSFLKII 158 (454)
T ss_dssp --CCTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-CSC-CTTCCEEECCSSCCSS-CC-CCTTCTTCCEE
T ss_pred --CcCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc-cCC-CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEE
Confidence 12467777777777775 5543 25566666666666542 211 1456666666666664 55 35555555544
No 370
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.42 E-value=2e-13 Score=140.97 Aligned_cols=140 Identities=23% Similarity=0.345 Sum_probs=101.7
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc-cccceec
Q 006884 68 RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALD 146 (627)
Q Consensus 68 ~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~-~~L~~L~ 146 (627)
..+++.|++++|.+.+ ++. +..+++|+.|++++|.+++..+ +..+++|++|+|++|++++.++ +.. .+|+.|+
T Consensus 176 l~~L~~L~l~~n~l~~-~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~ 249 (347)
T 4fmz_A 176 LTDLYSLSLNYNQIED-ISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP-LANLSQLTWLE 249 (347)
T ss_dssp CTTCSEEECTTSCCCC-CGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEE
T ss_pred CCCCCEEEccCCcccc-ccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc-hhcCCCCCEEE
Confidence 3578888998888874 333 7778888888888888875443 7778888888888888877766 322 3788888
Q ss_pred cccccccCCCchhhhccccccccccccccccccCCCC-CCCccceEeccCCCccccCCCcCCCCCCCcccC
Q 006884 147 LSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL-NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
+++|.+++ + ..+..+++|+.|++++|++++. +.. .+++|+.|++++|++++..|..+..+++|+.++
T Consensus 250 l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 317 (347)
T 4fmz_A 250 IGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLF 317 (347)
T ss_dssp CCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEE
T ss_pred CCCCccCC-C-hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEE
Confidence 88888775 3 3577778888888888887754 333 677788888888888777777677777766553
No 371
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.41 E-value=4.4e-13 Score=123.83 Aligned_cols=102 Identities=24% Similarity=0.328 Sum_probs=88.6
Q ss_pred cEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc--cccceeccccccccCCCchhhhccccccccccccc
Q 006884 97 KILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNN 174 (627)
Q Consensus 97 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N 174 (627)
+.+++++|+|+ .+|..+. ++|++|+|++|+|++++|..+. .+|+.|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 68999999997 8888775 8999999999999999886443 38999999999999765666899999999999999
Q ss_pred cccccCCCC--CCCccceEeccCCCcccc
Q 006884 175 SISGAIPPL--NLPRLKILNFSNNNLNGS 201 (627)
Q Consensus 175 ~l~~~~~~~--~~~~L~~L~l~~N~l~~~ 201 (627)
+|++.++.. .+++|+.|+|++|++...
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 999766653 799999999999999843
No 372
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.41 E-value=9.8e-14 Score=153.61 Aligned_cols=145 Identities=21% Similarity=0.293 Sum_probs=91.1
Q ss_pred CCCCCCCCCCCccceEe------eCCCCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCcccccc
Q 006884 48 NWNAAAPVCSSWIGVTC------NVNRSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQ 121 (627)
Q Consensus 48 ~W~~~~~~c~~w~gv~C------~~~~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 121 (627)
+|....++| .|.|..| .+....++.|++++|+++ .+|. .+. ++|+.|+|++|+|+ .+|. .+++|+
T Consensus 14 ~W~~~~~~~-~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~-~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~ 84 (622)
T 3g06_A 14 AWRRAAPAE-ESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPD-CLP--AHITTLVIPDNNLT-SLPA---LPPELR 84 (622)
T ss_dssp HHHHTCCGG-GHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCS-CCC--TTCSEEEECSCCCS-CCCC---CCTTCC
T ss_pred HHHhcCCcc-hhccccccCcccccccCCCCcEEEecCCCcC-ccCh-hhC--CCCcEEEecCCCCC-CCCC---cCCCCC
Confidence 465444444 7866322 112245788888888887 7776 343 67888888888887 5665 467788
Q ss_pred EEeeccccccccCchhhccccceeccccccccCCCchhhhccccccccccccccccccCCCCCCCccceEeccCCCcccc
Q 006884 122 YVYLQNNYFSGVLPAFRSLQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGS 201 (627)
Q Consensus 122 ~L~ls~N~l~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~ 201 (627)
+|+|++|+|+++++ ...+|++|+|++|+|++ +|. .+++|+.|++++|+|++ +|. .+++|++|++++|++++
T Consensus 85 ~L~Ls~N~l~~lp~--~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~-~l~~L~~L~Ls~N~l~~- 155 (622)
T 3g06_A 85 TLEVSGNQLTSLPV--LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPV-LPPGLQELSVSDNQLAS- 155 (622)
T ss_dssp EEEECSCCCSCCCC--CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCSC-
T ss_pred EEEcCCCcCCcCCC--CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCC-CCCCCCEEECcCCcCCC-
Confidence 88888888876655 23467777777777774 444 45566677777777664 332 24666666666666663
Q ss_pred CCCcCCCCC
Q 006884 202 IPDSLQTFP 210 (627)
Q Consensus 202 ~p~~~~~~~ 210 (627)
+|..+.++.
T Consensus 156 l~~~~~~L~ 164 (622)
T 3g06_A 156 LPALPSELC 164 (622)
T ss_dssp CCCCCTTCC
T ss_pred cCCccCCCC
Confidence 344433333
No 373
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.40 E-value=2.4e-13 Score=140.41 Aligned_cols=139 Identities=19% Similarity=0.277 Sum_probs=116.1
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc-cccceec
Q 006884 68 RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALD 146 (627)
Q Consensus 68 ~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~-~~L~~L~ 146 (627)
...++.|++++|.+++.. . +..+++|+.|+|++|.+++. |. +..+++|++|+|++|.+++. +.+.. .+|+.|+
T Consensus 198 l~~L~~L~l~~n~l~~~~-~--~~~~~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~ 271 (347)
T 4fmz_A 198 LTSLHYFTAYVNQITDIT-P--VANMTRLNSLKIGNNKITDL-SP-LANLSQLTWLEIGTNQISDI-NAVKDLTKLKMLN 271 (347)
T ss_dssp CTTCCEEECCSSCCCCCG-G--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCC-GGGTTCTTCCEEE
T ss_pred CCccceeecccCCCCCCc-h--hhcCCcCCEEEccCCccCCC-cc-hhcCCCCCEEECCCCccCCC-hhHhcCCCcCEEE
Confidence 467999999999998543 2 88999999999999999954 43 89999999999999999986 44433 4899999
Q ss_pred cccccccCCCchhhhccccccccccccccccccCCCC--CCCccceEeccCCCccccCCCcCCCCCCCcccC
Q 006884 147 LSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
+++|++++ + ..+..+++|+.|++++|++++..+.. .+++|+.|++++|++++..| +..+++|+.++
T Consensus 272 l~~n~l~~-~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 339 (347)
T 4fmz_A 272 VGSNQISD-I-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSAD 339 (347)
T ss_dssp CCSSCCCC-C-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEES
T ss_pred ccCCccCC-C-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceee
Confidence 99999996 4 45889999999999999999877653 89999999999999997766 66777776664
No 374
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.40 E-value=3.7e-13 Score=145.03 Aligned_cols=139 Identities=25% Similarity=0.332 Sum_probs=107.6
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhccccceecc
Q 006884 68 RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQLNALDL 147 (627)
Q Consensus 68 ~~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~L~~L~l 147 (627)
..+++.|++++|.+.+..| ++.+++|+.|+|++|.+++ ++ .+..+++|++|+|++|.+++.++-....+|+.|++
T Consensus 198 l~~L~~L~l~~n~l~~~~~---~~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l 272 (466)
T 1o6v_A 198 LTNLESLIATNNQISDITP---LGILTNLDELSLNGNQLKD-IG-TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKL 272 (466)
T ss_dssp CTTCSEEECCSSCCCCCGG---GGGCTTCCEEECCSSCCCC-CG-GGGGCTTCSEEECCSSCCCCCGGGTTCTTCSEEEC
T ss_pred CCCCCEEEecCCccccccc---ccccCCCCEEECCCCCccc-ch-hhhcCCCCCEEECCCCccccchhhhcCCCCCEEEC
Confidence 3578888998888886543 6778888999999998884 33 67888889999999998888776222247889999
Q ss_pred ccccccCCCchhhhccccccccccccccccccCCCCCCCccceEeccCCCccccCCCcCCCCCCCccc
Q 006884 148 SFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV 215 (627)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~ 215 (627)
++|.+++..| +..+++|+.|+|++|++++..+...+++|+.|++++|++++..| +..+++|+.+
T Consensus 273 ~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L 336 (466)
T 1o6v_A 273 GANQISNISP--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRL 336 (466)
T ss_dssp CSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEE
T ss_pred CCCccCcccc--ccCCCccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCCchh--hccCccCCEe
Confidence 9998886433 78888899999999988876654478888999999998887665 5566666654
No 375
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.40 E-value=5.7e-13 Score=142.83 Aligned_cols=100 Identities=18% Similarity=0.193 Sum_probs=61.6
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc-cccceecc
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALDL 147 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~-~~L~~L~l 147 (627)
..++.|++++|+..+.+ .++.+++|+.|+|++|++++ +| +..+++|++|++++|++++. + +.. .+|+.|+|
T Consensus 148 ~~L~~L~l~~n~~~~~~---~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~-l~~l~~L~~L~L 219 (457)
T 3bz5_A 148 TQLTELDCHLNKKITKL---DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL-D-LNQNIQLTFLDC 219 (457)
T ss_dssp TTCCEEECTTCSCCCCC---CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC-C-CTTCTTCSEEEC
T ss_pred CcCCEEECCCCCccccc---ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee-c-cccCCCCCEEEC
Confidence 45667777777555555 25666667777777777664 44 66666666666666666665 1 222 25666666
Q ss_pred ccccccCCCchhhhcccccccccccccccccc
Q 006884 148 SFNAFTGNIPPGFQNLTRLHLLNLQNNSISGA 179 (627)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 179 (627)
++|+|++ +| +..+++|+.|++++|+|++.
T Consensus 220 s~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~ 248 (457)
T 3bz5_A 220 SSNKLTE-ID--VTPLTQLTYFDCSVNPLTEL 248 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCSEEECCSSCCSCC
T ss_pred cCCcccc-cC--ccccCCCCEEEeeCCcCCCc
Confidence 6666665 44 56666666666666666653
No 376
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.40 E-value=7.9e-13 Score=141.75 Aligned_cols=116 Identities=21% Similarity=0.252 Sum_probs=54.5
Q ss_pred cEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc-cccceeccc
Q 006884 70 RVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALDLS 148 (627)
Q Consensus 70 ~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~-~~L~~L~ls 148 (627)
+++.|+|++|++++ +| .++.+++|+.|+|++|+|++ +| ++.+++|++|+|++|++++.. +.. .+|++|+|+
T Consensus 43 ~L~~L~Ls~n~l~~-~~--~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~~--~~~l~~L~~L~L~ 114 (457)
T 3bz5_A 43 TLTSLDCHNSSITD-MT--GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNLD--VTPLTKLTYLNCD 114 (457)
T ss_dssp TCCEEECCSSCCCC-CT--TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC--CTTCTTCCEEECC
T ss_pred CCCEEEccCCCccc-Ch--hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCceee--cCCCCcCCEEECC
Confidence 45555555555553 23 24555555555555555553 22 455555555555555555431 222 245555555
Q ss_pred cccccCCCchhhhccccccccccccccccccCCCCCCCccceEeccCCC
Q 006884 149 FNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNN 197 (627)
Q Consensus 149 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~ 197 (627)
+|++++ +| ++.+++|++|++++|+|++ ++...+++|++|++++|+
T Consensus 115 ~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~l~~l~~L~~L~l~~n~ 159 (457)
T 3bz5_A 115 TNKLTK-LD--VSQNPLLTYLNCARNTLTE-IDVSHNTQLTELDCHLNK 159 (457)
T ss_dssp SSCCSC-CC--CTTCTTCCEEECTTSCCSC-CCCTTCTTCCEEECTTCS
T ss_pred CCcCCe-ec--CCCCCcCCEEECCCCccce-eccccCCcCCEEECCCCC
Confidence 555553 22 4445555555555555544 222244444444444443
No 377
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.39 E-value=4.8e-13 Score=146.92 Aligned_cols=117 Identities=27% Similarity=0.346 Sum_probs=86.3
Q ss_pred cccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhcc-ccceeccccccccCCCchhhhcccccccccccc
Q 006884 95 ALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSL-QLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQN 173 (627)
Q Consensus 95 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~-~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~ 173 (627)
.|+.|+|++|.|++ +|. |+.+++|++|+|++|+|+.+++.+... +|+.|+|++|+|++ +| .|+.+++|+.|+|++
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCN 517 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCS
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCcccccccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCC
Confidence 36678888888884 675 888888888888888888655555443 78888888888885 66 788888888888888
Q ss_pred ccccccC-CCC--CCCccceEeccCCCccccCCCc---CCCCCCCccc
Q 006884 174 NSISGAI-PPL--NLPRLKILNFSNNNLNGSIPDS---LQTFPNSSFV 215 (627)
Q Consensus 174 N~l~~~~-~~~--~~~~L~~L~l~~N~l~~~~p~~---~~~~~~l~~~ 215 (627)
|+|++.+ |.. .+++|+.|+|++|++++.+|.. +..+++|+++
T Consensus 518 N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L 565 (567)
T 1dce_A 518 NRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSI 565 (567)
T ss_dssp SCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEE
T ss_pred CCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCcc
Confidence 8888765 543 7888888888888888655432 2235666554
No 378
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.37 E-value=1.6e-12 Score=139.32 Aligned_cols=132 Identities=22% Similarity=0.293 Sum_probs=97.5
Q ss_pred cEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhccccceecccc
Q 006884 70 RVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQLNALDLSF 149 (627)
Q Consensus 70 ~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~L~~L~ls~ 149 (627)
+++.|++++|++++ +|. -.++|+.|+|++|++++ +| .|+++++|++|++++|++++++... .+|++|++++
T Consensus 112 ~L~~L~l~~n~l~~-l~~----~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~lp~~~--~~L~~L~L~~ 182 (454)
T 1jl5_A 112 SLKSLLVDNNNLKA-LSD----LPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKKLPDLP--PSLEFIAAGN 182 (454)
T ss_dssp TCCEEECCSSCCSC-CCS----CCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSCCCCCC--TTCCEEECCS
T ss_pred CCcEEECCCCccCc-ccC----CCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcccCCCc--ccccEEECcC
Confidence 45555555555542 222 11578888888888885 77 5888899999999999988754322 3789999999
Q ss_pred ccccCCCchhhhccccccccccccccccccCCCCCCCccceEeccCCCccccCCCcCCCCCCCcccC
Q 006884 150 NAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 150 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
|++++ +| .|+++++|+.|++++|++++ +|. ..++|+.|++++|.++ .+|. +..+++|+.++
T Consensus 183 n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~-~~~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~ 243 (454)
T 1jl5_A 183 NQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPD-LPLSLESIVAGNNILE-ELPE-LQNLPFLTTIY 243 (454)
T ss_dssp SCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCC-CCTTCCEEECCSSCCS-SCCC-CTTCTTCCEEE
T ss_pred CcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCC-CcCcccEEECcCCcCC-cccc-cCCCCCCCEEE
Confidence 99986 66 58889999999999999886 333 2358889999999888 6774 77787777664
No 379
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.35 E-value=2.2e-14 Score=147.58 Aligned_cols=147 Identities=20% Similarity=0.274 Sum_probs=77.6
Q ss_pred CcEEEEEcCCCCcccc-cCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccc-ccccc-Cch-hhc-cccc
Q 006884 69 SRVIGIHLPGIGFTGP-IPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNN-YFSGV-LPA-FRS-LQLN 143 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~-~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N-~l~~~-~~~-~~~-~~L~ 143 (627)
.+++.|+|++|.+++. ++. .+..+++|+.|+|++|.+++..|..++.+++|++|+|++| .+++. ++. +.. .+|+
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~-~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~ 171 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHG-ILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 171 (336)
T ss_dssp BCCCEEECTTCEECHHHHHH-HHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCEEEccCCCcCHHHHHH-HHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCC
Confidence 3455555555555443 443 4555555555555555555555555555556666666655 44431 222 111 2566
Q ss_pred eeccccc-cccCC-Cchhhhccc-cccccccccc--ccc-ccCCCC--CCCccceEeccCCC-ccccCCCcCCCCCCCcc
Q 006884 144 ALDLSFN-AFTGN-IPPGFQNLT-RLHLLNLQNN--SIS-GAIPPL--NLPRLKILNFSNNN-LNGSIPDSLQTFPNSSF 214 (627)
Q Consensus 144 ~L~ls~N-~l~~~-~p~~~~~l~-~L~~L~l~~N--~l~-~~~~~~--~~~~L~~L~l~~N~-l~~~~p~~~~~~~~l~~ 214 (627)
+|+|++| .+++. ++..+..++ +|++|+|++| .++ +.++.. .+++|+.|++++|. +++..+..+.++++|+.
T Consensus 172 ~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~ 251 (336)
T 2ast_B 172 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQH 251 (336)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCE
T ss_pred EEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCE
Confidence 6666666 55543 455555566 6666666666 333 222222 45666666666666 55555555555555555
Q ss_pred cC
Q 006884 215 VG 216 (627)
Q Consensus 215 ~~ 216 (627)
++
T Consensus 252 L~ 253 (336)
T 2ast_B 252 LS 253 (336)
T ss_dssp EE
T ss_pred ee
Confidence 53
No 380
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.32 E-value=2e-12 Score=133.62 Aligned_cols=106 Identities=21% Similarity=0.241 Sum_probs=82.9
Q ss_pred CCccceEeeCCCCcEEEEEcCCC-CcccccCccccCCCCcccEEEccC-CcCCCCCCCCcCccccccEEeeccccccccC
Q 006884 57 SSWIGVTCNVNRSRVIGIHLPGI-GFTGPIPANSIGKLDALKILSLRS-NYLNGTLPSDITSISSLQYVYLQNNYFSGVL 134 (627)
Q Consensus 57 ~~w~gv~C~~~~~~v~~L~l~~~-~l~~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 134 (627)
|.|.+|.|+ ++ +|+ .+|. |..+++|+.|+|++ |.|++..|..|.+|++|++|+|++|+|++++
T Consensus 8 C~~~~v~~~------------~~n~l~-~ip~--l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 72 (347)
T 2ifg_A 8 HGSSGLRCT------------RDGALD-SLHH--LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVA 72 (347)
T ss_dssp SSSSCEECC------------SSCCCT-TTTT--SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEEC
T ss_pred ccCCEEEcC------------CCCCCC-ccCC--CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeC
Confidence 367666664 44 676 5776 89999999999996 9999777788999999999999999999988
Q ss_pred chhhc-c-ccceeccccccccCCCchhhhccccccccccccccccc
Q 006884 135 PAFRS-L-QLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISG 178 (627)
Q Consensus 135 ~~~~~-~-~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 178 (627)
|..+. + +|+.|+|++|+|++..|..|..++ |+.|+|++|+|..
T Consensus 73 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 73 PDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp TTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred HHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 86433 3 788888888888865555555554 8888888888764
No 381
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.31 E-value=1e-13 Score=145.56 Aligned_cols=149 Identities=22% Similarity=0.311 Sum_probs=109.7
Q ss_pred CCcEEEEEcCCC---CcccccCccc------cCCCCcccEEEccCCcCCC----CCCCCcCccccccEEeeccccccccC
Q 006884 68 RSRVIGIHLPGI---GFTGPIPANS------IGKLDALKILSLRSNYLNG----TLPSDITSISSLQYVYLQNNYFSGVL 134 (627)
Q Consensus 68 ~~~v~~L~l~~~---~l~~~~~~~~------~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~ls~N~l~~~~ 134 (627)
..+++.|+|++| ++++.+|... |..+++|+.|+|++|.|++ .+|..+..+++|++|+|++|.++...
T Consensus 59 ~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~ 138 (386)
T 2ca6_A 59 KKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQA 138 (386)
T ss_dssp CTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHH
T ss_pred CCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHH
Confidence 357888888885 4556666521 3788888899999988886 46777788888999999988887554
Q ss_pred chh-hc--------------cccceecccccccc-CCCc---hhhhcccccccccccccccc--c---cCC-CC-CCCcc
Q 006884 135 PAF-RS--------------LQLNALDLSFNAFT-GNIP---PGFQNLTRLHLLNLQNNSIS--G---AIP-PL-NLPRL 188 (627)
Q Consensus 135 ~~~-~~--------------~~L~~L~ls~N~l~-~~~p---~~~~~l~~L~~L~l~~N~l~--~---~~~-~~-~~~~L 188 (627)
+.. .. .+|++|+|++|+|+ +.+| ..+..+++|++|+|++|+|+ | ..+ .. .+++|
T Consensus 139 ~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L 218 (386)
T 2ca6_A 139 GAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQEL 218 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTC
T ss_pred HHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCc
Confidence 321 11 47888899888887 4455 46778888888999888887 3 233 22 77888
Q ss_pred ceEeccCCCcc----ccCCCcCCCCCCCcccC
Q 006884 189 KILNFSNNNLN----GSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 189 ~~L~l~~N~l~----~~~p~~~~~~~~l~~~~ 216 (627)
+.|+|++|.++ +.+|..+..+++|..++
T Consensus 219 ~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~ 250 (386)
T 2ca6_A 219 KVLDLQDNTFTHLGSSALAIALKSWPNLRELG 250 (386)
T ss_dssp CEEECCSSCCHHHHHHHHHHHGGGCTTCCEEE
T ss_pred cEEECcCCCCCcHHHHHHHHHHccCCCcCEEE
Confidence 88889888886 56777777777777664
No 382
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.30 E-value=4.1e-12 Score=140.58 Aligned_cols=134 Identities=25% Similarity=0.327 Sum_probs=73.3
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCC---CcCcc--------------ccccEEeecccccc
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPS---DITSI--------------SSLQYVYLQNNYFS 131 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~---~~~~l--------------~~L~~L~ls~N~l~ 131 (627)
.+++.|+|++|++++ +|. . +++|+.|+|++|+|++ +|. .+..| ++|++|+|++|+++
T Consensus 121 ~~L~~L~L~~N~l~~-lp~-~---l~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~ 194 (622)
T 3g06_A 121 SGLCKLWIFGNQLTS-LPV-L---PPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLA 194 (622)
T ss_dssp TTCCEEECCSSCCSC-CCC-C---CTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCS
T ss_pred CCcCEEECCCCCCCc-CCC-C---CCCCCEEECcCCcCCC-cCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCC
Confidence 345566666666552 443 1 3666666666666663 332 22222 66777777777777
Q ss_pred ccCchhh------------------ccccceeccccccccCCCchhhhccccccccccccccccccCCCCCCCccceEec
Q 006884 132 GVLPAFR------------------SLQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNF 193 (627)
Q Consensus 132 ~~~~~~~------------------~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l 193 (627)
++++... ..+|+.|+|++|+|++ +| ..+++|+.|+|++|+|++ +|. .+++|+.|+|
T Consensus 195 ~l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~-~~~~L~~L~L 268 (622)
T 3g06_A 195 SLPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM-LPSGLLSLSV 268 (622)
T ss_dssp CCCCCCTTCCEEECCSSCCSSCCCCCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC-CCTTCCEEEC
T ss_pred CCCCccchhhEEECcCCcccccCCCCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc-ccccCcEEeC
Confidence 6543210 0235555555555553 44 233555666666666553 333 4556666666
Q ss_pred cCCCccccCCCcCCCCCCCccc
Q 006884 194 SNNNLNGSIPDSLQTFPNSSFV 215 (627)
Q Consensus 194 ~~N~l~~~~p~~~~~~~~l~~~ 215 (627)
++|+|+ .+|..+.++++|..+
T Consensus 269 s~N~L~-~lp~~l~~l~~L~~L 289 (622)
T 3g06_A 269 YRNQLT-RLPESLIHLSSETTV 289 (622)
T ss_dssp CSSCCC-SCCGGGGGSCTTCEE
T ss_pred CCCCCC-cCCHHHhhccccCEE
Confidence 666666 556556555555544
No 383
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.30 E-value=4.5e-14 Score=133.59 Aligned_cols=124 Identities=21% Similarity=0.280 Sum_probs=106.9
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc-cccceecc
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALDL 147 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~-~~L~~L~l 147 (627)
.+++.|+|++|++++ +| .+.++++|+.|+|++|.|+ .+|..+..+++|++|+|++|++++++ .+.. .+|+.|+|
T Consensus 48 ~~L~~L~ls~n~l~~-l~--~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~l~-~~~~l~~L~~L~l 122 (198)
T 1ds9_A 48 KACKHLALSTNNIEK-IS--SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIASLS-GIEKLVNLRVLYM 122 (198)
T ss_dssp TTCSEEECSEEEESC-CC--CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCCHH-HHHHHHHSSEEEE
T ss_pred CCCCEEECCCCCCcc-cc--ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCcCC-ccccCCCCCEEEC
Confidence 679999999999996 76 6899999999999999999 78888888999999999999999964 4444 48999999
Q ss_pred ccccccCCCc-hhhhccccccccccccccccccCCC-----------C-CCCccceEeccCCCcc
Q 006884 148 SFNAFTGNIP-PGFQNLTRLHLLNLQNNSISGAIPP-----------L-NLPRLKILNFSNNNLN 199 (627)
Q Consensus 148 s~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~-----------~-~~~~L~~L~l~~N~l~ 199 (627)
++|+|++..+ ..+..+++|++|++++|++++.+|. . .+++|+.|+ +|.++
T Consensus 123 ~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 123 SNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp SEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 9999995322 4789999999999999999987664 2 688999887 77776
No 384
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.27 E-value=3.8e-13 Score=139.88 Aligned_cols=136 Identities=19% Similarity=0.296 Sum_probs=87.0
Q ss_pred CcEEEEEcCCCCcccccCc---cccCCCC-cccEEEccCCcCCCCCCCCcCcc-----ccccEEeeccccccccCch---
Q 006884 69 SRVIGIHLPGIGFTGPIPA---NSIGKLD-ALKILSLRSNYLNGTLPSDITSI-----SSLQYVYLQNNYFSGVLPA--- 136 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~---~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~ls~N~l~~~~~~--- 136 (627)
.+++.|+|++|++++.-+. ..|..++ +|+.|+|++|.|++..+..+..+ ++|++|+|++|++++..+.
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 4477777777777644330 2566777 77777777777776666666654 7777777777777766653
Q ss_pred --hhc--cccceeccccccccCCCchhhhc-----cccccccccccccccccCCC----C--CCC-ccceEeccCCCccc
Q 006884 137 --FRS--LQLNALDLSFNAFTGNIPPGFQN-----LTRLHLLNLQNNSISGAIPP----L--NLP-RLKILNFSNNNLNG 200 (627)
Q Consensus 137 --~~~--~~L~~L~ls~N~l~~~~p~~~~~-----l~~L~~L~l~~N~l~~~~~~----~--~~~-~L~~L~l~~N~l~~ 200 (627)
+.. .+|+.|+|++|+|++..+..+.. .++|++|+|++|+|++.... . .++ +|++|+|++|++++
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~ 181 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLAS 181 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCch
Confidence 111 36777777777777655544433 24777777777777742221 1 333 77777777777775
Q ss_pred cCCC
Q 006884 201 SIPD 204 (627)
Q Consensus 201 ~~p~ 204 (627)
..+.
T Consensus 182 ~~~~ 185 (362)
T 3goz_A 182 KNCA 185 (362)
T ss_dssp SCHH
T ss_pred hhHH
Confidence 5543
No 385
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.26 E-value=3.1e-13 Score=138.83 Aligned_cols=147 Identities=18% Similarity=0.197 Sum_probs=117.8
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCC-cCCCC-CCCCcCccccccEEeeccc-ccccc-Cch-hhc-c-c
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSN-YLNGT-LPSDITSISSLQYVYLQNN-YFSGV-LPA-FRS-L-Q 141 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~ls~N-~l~~~-~~~-~~~-~-~ 141 (627)
.+++.|+|++|++++..+. .++.+++|+.|+|++| .+++. +|..+..+++|++|+|++| .+++. ++. +.. . +
T Consensus 118 ~~L~~L~L~~~~l~~~~~~-~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~ 196 (336)
T 2ast_B 118 SKLQNLSLEGLRLSDPIVN-TLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSET 196 (336)
T ss_dssp CCCSEEECTTCBCCHHHHH-HHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTT
T ss_pred CCCCEEeCcCcccCHHHHH-HHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccC
Confidence 6899999999999988877 7999999999999999 78753 6767889999999999999 99864 343 222 4 8
Q ss_pred cceeccccc--ccc-CCCchhhhcccccccccccccc-ccccCCCC--CCCccceEeccCCC-ccccCCCcCCCCCCCcc
Q 006884 142 LNALDLSFN--AFT-GNIPPGFQNLTRLHLLNLQNNS-ISGAIPPL--NLPRLKILNFSNNN-LNGSIPDSLQTFPNSSF 214 (627)
Q Consensus 142 L~~L~ls~N--~l~-~~~p~~~~~l~~L~~L~l~~N~-l~~~~~~~--~~~~L~~L~l~~N~-l~~~~p~~~~~~~~l~~ 214 (627)
|++|+|++| .++ +.+|..+..+++|+.|++++|. +++..+.. .+++|+.|++++|. ++......+.++++|+.
T Consensus 197 L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~ 276 (336)
T 2ast_B 197 ITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKT 276 (336)
T ss_dssp CCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCE
T ss_pred CCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCE
Confidence 999999999 555 4578888999999999999999 66544433 78999999999996 32221125677777777
Q ss_pred cC
Q 006884 215 VG 216 (627)
Q Consensus 215 ~~ 216 (627)
++
T Consensus 277 L~ 278 (336)
T 2ast_B 277 LQ 278 (336)
T ss_dssp EE
T ss_pred Ee
Confidence 65
No 386
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.24 E-value=1.3e-13 Score=144.81 Aligned_cols=132 Identities=22% Similarity=0.354 Sum_probs=73.3
Q ss_pred CcEEEEEcCCCCccc----ccCccccCCCCcccEEEccCCcCCCCCCCCcC----cc---------ccccEEeecccccc
Q 006884 69 SRVIGIHLPGIGFTG----PIPANSIGKLDALKILSLRSNYLNGTLPSDIT----SI---------SSLQYVYLQNNYFS 131 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~----~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~----~l---------~~L~~L~ls~N~l~ 131 (627)
.+++.|+|++|.+++ .+|. .+..+++|+.|+|++|.|++..+..+. .+ ++|++|+|++|+++
T Consensus 94 ~~L~~L~Ls~n~l~~~~~~~l~~-~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~ 172 (386)
T 2ca6_A 94 PKLHTVRLSDNAFGPTAQEPLID-FLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLE 172 (386)
T ss_dssp TTCCEEECCSCCCCTTTHHHHHH-HHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCT
T ss_pred CcccEEECCCCcCCHHHHHHHHH-HHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCC
Confidence 566777777777765 3454 566667777777777766533222222 22 66666666666665
Q ss_pred -ccCch----hhc-cccceecccccccc--C---CCchhhhcccccccccccccccc----ccCCCC--CCCccceEecc
Q 006884 132 -GVLPA----FRS-LQLNALDLSFNAFT--G---NIPPGFQNLTRLHLLNLQNNSIS----GAIPPL--NLPRLKILNFS 194 (627)
Q Consensus 132 -~~~~~----~~~-~~L~~L~ls~N~l~--~---~~p~~~~~l~~L~~L~l~~N~l~----~~~~~~--~~~~L~~L~l~ 194 (627)
+.++. +.. .+|+.|+|++|+|+ | ..|..+..+++|+.|+|++|+|+ +.+|.. .+++|+.|+|+
T Consensus 173 ~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~ 252 (386)
T 2ca6_A 173 NGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLN 252 (386)
T ss_dssp GGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECT
T ss_pred cHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECC
Confidence 22332 111 25666666666665 2 23335556666666666666664 233321 45566666666
Q ss_pred CCCcccc
Q 006884 195 NNNLNGS 201 (627)
Q Consensus 195 ~N~l~~~ 201 (627)
+|.+++.
T Consensus 253 ~n~i~~~ 259 (386)
T 2ca6_A 253 DCLLSAR 259 (386)
T ss_dssp TCCCCHH
T ss_pred CCCCchh
Confidence 6666543
No 387
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.24 E-value=9.4e-12 Score=128.47 Aligned_cols=102 Identities=23% Similarity=0.208 Sum_probs=88.6
Q ss_pred EEEccCC-cCCCCCCCCcCccccccEEeecc-ccccccCchhh-cc-ccceeccccccccCCCchhhhcccccccccccc
Q 006884 98 ILSLRSN-YLNGTLPSDITSISSLQYVYLQN-NYFSGVLPAFR-SL-QLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQN 173 (627)
Q Consensus 98 ~L~L~~N-~l~~~~p~~~~~l~~L~~L~ls~-N~l~~~~~~~~-~~-~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~ 173 (627)
.+++++| +|+ .+|. |..+++|++|+|++ |+|+++++..+ .+ +|+.|+|++|+|++..|..|.+|++|+.|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4688988 898 6898 99999999999996 99999998644 33 899999999999998888999999999999999
Q ss_pred ccccccCCCC-CCCccceEeccCCCcccc
Q 006884 174 NSISGAIPPL-NLPRLKILNFSNNNLNGS 201 (627)
Q Consensus 174 N~l~~~~~~~-~~~~L~~L~l~~N~l~~~ 201 (627)
|+|++.++.. ...+|+.|+|++|+|...
T Consensus 90 N~l~~~~~~~~~~~~L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 90 NALESLSWKTVQGLSLQELVLSGNPLHCS 118 (347)
T ss_dssp SCCSCCCSTTTCSCCCCEEECCSSCCCCC
T ss_pred CccceeCHHHcccCCceEEEeeCCCccCC
Confidence 9999766654 333499999999999743
No 388
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.20 E-value=7.2e-11 Score=116.66 Aligned_cols=136 Identities=18% Similarity=0.093 Sum_probs=106.5
Q ss_pred cccCcCCceEEEEEEEcCCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHH
Q 006884 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 418 (627)
..++.|+.+.||++... ++.+++|+..... .....+.+|++++..+..+..+.++++++...+..++||||++|.+|.
T Consensus 20 ~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 98 (263)
T 3tm0_A 20 KDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCS 98 (263)
T ss_dssp ECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHH
T ss_pred eeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehh
Confidence 45677888999999865 6889999986532 234468899999999966778888999998888899999999999997
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------------
Q 006884 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEG------------------------------------------- 455 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------------- 455 (627)
+.+.. ......++.++++++..||+..
T Consensus 99 ~~~~~----------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (263)
T 3tm0_A 99 EEYED----------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPR 168 (263)
T ss_dssp HHCCT----------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHH
T ss_pred hccCC----------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHH
Confidence 76321 1123467889999999999811
Q ss_pred -------------CCCeeecCCCCCCeEecCCCCeEEeeccccc
Q 006884 456 -------------GAKFTHGNIKSSNVLLTQDLNGCISDVGLAH 486 (627)
Q Consensus 456 -------------~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 486 (627)
.+.++|+|++|.||+++++..+.|+||+.+.
T Consensus 169 ~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 169 ELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1348999999999999876666799999764
No 389
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.18 E-value=3.5e-12 Score=132.53 Aligned_cols=143 Identities=17% Similarity=0.147 Sum_probs=112.5
Q ss_pred EEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCC----CCcCccc-cccEEeeccccccccCch-hhc------c
Q 006884 73 GIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLP----SDITSIS-SLQYVYLQNNYFSGVLPA-FRS------L 140 (627)
Q Consensus 73 ~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~ls~N~l~~~~~~-~~~------~ 140 (627)
..+|++|+++|.+|. .+...++|+.|+|++|.|++..+ ..|..++ +|++|+|++|++++..+. +.. .
T Consensus 2 ~~~ls~n~~~~~~~~-~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 80 (362)
T 3goz_A 2 NYKLTLHPGSNPVEE-FTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPA 80 (362)
T ss_dssp EEECCCCTTCCHHHH-HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCT
T ss_pred ccccccccchHHHHH-HHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCC
Confidence 367899999999887 67777789999999999996666 6777888 999999999999998664 322 5
Q ss_pred ccceeccccccccCCCchhhhcc-----ccccccccccccccccCCCC------C-CCccceEeccCCCccccCC----C
Q 006884 141 QLNALDLSFNAFTGNIPPGFQNL-----TRLHLLNLQNNSISGAIPPL------N-LPRLKILNFSNNNLNGSIP----D 204 (627)
Q Consensus 141 ~L~~L~ls~N~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~~~~------~-~~~L~~L~l~~N~l~~~~p----~ 204 (627)
+|++|+|++|++++..+..+... ++|++|+|++|+|++..+.. . .++|++|+|++|.+++..+ .
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 160 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQ 160 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred CccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHH
Confidence 79999999999998777765554 89999999999998755432 2 3699999999999985333 3
Q ss_pred cCCCCC-CCcccC
Q 006884 205 SLQTFP-NSSFVG 216 (627)
Q Consensus 205 ~~~~~~-~l~~~~ 216 (627)
.+..++ +|+.++
T Consensus 161 ~l~~~~~~L~~L~ 173 (362)
T 3goz_A 161 ILAAIPANVNSLN 173 (362)
T ss_dssp HHHTSCTTCCEEE
T ss_pred HHhcCCccccEee
Confidence 333333 555553
No 390
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.07 E-value=2.8e-12 Score=137.81 Aligned_cols=148 Identities=15% Similarity=0.094 Sum_probs=115.6
Q ss_pred CcEEEEEcCCCCcccc----cCccccCCCCcccEEEccCCcCCCC----CCCCcCccccccEEeeccccccccCchhh-c
Q 006884 69 SRVIGIHLPGIGFTGP----IPANSIGKLDALKILSLRSNYLNGT----LPSDITSISSLQYVYLQNNYFSGVLPAFR-S 139 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~----~~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~~~~~~~~-~ 139 (627)
.+++.|+|++|.+++. +.+..+..+++|+.|+|++|.+++. +|..+..+++|++|+|++|.++...+... .
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 6799999999998754 2222345789999999999999854 67777889999999999999976544321 1
Q ss_pred ------cccceeccccccccCC----CchhhhccccccccccccccccccCCCC-------CCCccceEeccCCCccc--
Q 006884 140 ------LQLNALDLSFNAFTGN----IPPGFQNLTRLHLLNLQNNSISGAIPPL-------NLPRLKILNFSNNNLNG-- 200 (627)
Q Consensus 140 ------~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~~~~-------~~~~L~~L~l~~N~l~~-- 200 (627)
.+|+.|+|++|.+++. +|..+..+++|++|+|++|++++..+.. ..++|+.|++++|.+++
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~ 386 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSS 386 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHH
T ss_pred HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhh
Confidence 3799999999999865 5667788899999999999998654321 26799999999999986
Q ss_pred --cCCCcCCCCCCCcccC
Q 006884 201 --SIPDSLQTFPNSSFVG 216 (627)
Q Consensus 201 --~~p~~~~~~~~l~~~~ 216 (627)
.+|..+..+++|+.++
T Consensus 387 ~~~l~~~l~~~~~L~~L~ 404 (461)
T 1z7x_W 387 CSSLAATLLANHSLRELD 404 (461)
T ss_dssp HHHHHHHHHHCCCCCEEE
T ss_pred HHHHHHHHHhCCCccEEE
Confidence 6787777777777664
No 391
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.07 E-value=2.3e-10 Score=118.15 Aligned_cols=148 Identities=15% Similarity=0.059 Sum_probs=117.3
Q ss_pred EEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeecc-ccccccCchh-hc--cccceec
Q 006884 71 VIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQN-NYFSGVLPAF-RS--LQLNALD 146 (627)
Q Consensus 71 v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~-N~l~~~~~~~-~~--~~L~~L~ 146 (627)
...+.+.+|+++. ++++.|..+++|+.|++++|+|++..+..+....++..|++++ |++..+++.. .. ..++.|+
T Consensus 82 ~~~l~~~~N~l~~-l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~ 160 (350)
T 4ay9_X 82 HEIRIEKANNLLY-INPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILW 160 (350)
T ss_dssp CEEEEEEETTCCE-ECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEE
T ss_pred hhhhcccCCcccc-cCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhc
Confidence 4457778899984 5544899999999999999999977677777888899999966 6777776653 32 2689999
Q ss_pred cccccccCCCchhhhcccccccccccc-ccccccCCC-C--CCCccceEeccCCCccccCCCcCCCCCCCcccCCCCCC
Q 006884 147 LSFNAFTGNIPPGFQNLTRLHLLNLQN-NSISGAIPP-L--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVGNSMLC 221 (627)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~~~-~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~n~~l~ 221 (627)
|++|+|+ .+|......++|+.|++++ |+++ .+|. . .+++|+.|+|++|+|+...+..+.+++.|..+++..+.
T Consensus 161 L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~-~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~~~l~ 237 (350)
T 4ay9_X 161 LNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLK 237 (350)
T ss_dssp CCSSCCC-EECTTSSTTEEEEEEECTTCTTCC-CCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTCTTCC
T ss_pred ccccccc-CCChhhccccchhHHhhccCCccc-CCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccCCCcC
Confidence 9999999 5777666778999999986 5665 5554 3 89999999999999995555678889988888776543
No 392
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.07 E-value=1.9e-12 Score=139.00 Aligned_cols=135 Identities=21% Similarity=0.199 Sum_probs=104.2
Q ss_pred CcEEEEEcCCCCcccc----cCccccCCCCcccEEEccCCcCCCCC-----CCCcCccccccEEeecccccccc----Cc
Q 006884 69 SRVIGIHLPGIGFTGP----IPANSIGKLDALKILSLRSNYLNGTL-----PSDITSISSLQYVYLQNNYFSGV----LP 135 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~----~~~~~~~~l~~L~~L~L~~N~l~~~~-----p~~~~~l~~L~~L~ls~N~l~~~----~~ 135 (627)
.+++.|+|++|++++. ++. .+..+++|+.|+|++|.+++.- +..+..+++|++|+|++|.++.. ++
T Consensus 199 ~~L~~L~L~~n~l~~~~~~~l~~-~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~ 277 (461)
T 1z7x_W 199 CQLEALKLESCGVTSDNCRDLCG-IVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLC 277 (461)
T ss_dssp CCCCEEECTTSCCBTTHHHHHHH-HHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHH
T ss_pred CCceEEEccCCCCcHHHHHHHHH-HHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHH
Confidence 4799999999999863 555 6888999999999999987532 22234689999999999999874 23
Q ss_pred h-hhc-cccceeccccccccCCCchhhhcc-----ccccccccccccccccC----CCC--CCCccceEeccCCCccccC
Q 006884 136 A-FRS-LQLNALDLSFNAFTGNIPPGFQNL-----TRLHLLNLQNNSISGAI----PPL--NLPRLKILNFSNNNLNGSI 202 (627)
Q Consensus 136 ~-~~~-~~L~~L~ls~N~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~----~~~--~~~~L~~L~l~~N~l~~~~ 202 (627)
. +.. .+|+.|+|++|.+++..+..+... ++|+.|+|++|++++.. +.. .+++|+.|++++|++++..
T Consensus 278 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~ 357 (461)
T 1z7x_W 278 RVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAG 357 (461)
T ss_dssp HHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHH
T ss_pred HHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcccccc
Confidence 2 322 479999999999986555555543 69999999999998652 222 6789999999999998654
Q ss_pred CC
Q 006884 203 PD 204 (627)
Q Consensus 203 p~ 204 (627)
+.
T Consensus 358 ~~ 359 (461)
T 1z7x_W 358 VR 359 (461)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 393
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.05 E-value=3.5e-10 Score=111.35 Aligned_cols=132 Identities=12% Similarity=0.104 Sum_probs=97.1
Q ss_pred ccC-cCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCc-eeceeeEEeeCCceeEEEecCCCCcHH
Q 006884 341 VLG-KGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSN-VVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 341 ~lg-~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~n-iv~~~~~~~~~~~~~lv~e~~~~gsL~ 418 (627)
.++ .|..+.||++...+|+.+++|..... ....+..|++++..+..+.- +.+++++....+..++||||++|.++.
T Consensus 26 ~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~ 103 (264)
T 1nd4_A 26 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL 103 (264)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred ecccCCCCceEEEEecCCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC
Confidence 344 55569999998777888999987543 23457889999999855522 455788877777889999999998883
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------------
Q 006884 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEG------------------------------------------- 455 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------------- 455 (627)
... .+ ...++.++++.+..||+..
T Consensus 104 --~~~--------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (264)
T 1nd4_A 104 --SSH--------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAEL 170 (264)
T ss_dssp --TSC--------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHH
T ss_pred --cCc--------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHH
Confidence 211 11 2256677778888888643
Q ss_pred ------------CCCeeecCCCCCCeEecCCCCeEEeecccccc
Q 006884 456 ------------GAKFTHGNIKSSNVLLTQDLNGCISDVGLAHL 487 (627)
Q Consensus 456 ------------~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~ 487 (627)
...++|+|++|.||++++++.+.|+|||.+..
T Consensus 171 ~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 171 FARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11299999999999998776677999998753
No 394
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.99 E-value=3.2e-12 Score=125.25 Aligned_cols=162 Identities=18% Similarity=0.138 Sum_probs=112.8
Q ss_pred CCCCccceEeeCCCCcEEEEEcCC---CCcccccCccccCCCCcccEEEccCCcCCCCCCC-CcCccccccE--Eeeccc
Q 006884 55 VCSSWIGVTCNVNRSRVIGIHLPG---IGFTGPIPANSIGKLDALKILSLRSNYLNGTLPS-DITSISSLQY--VYLQNN 128 (627)
Q Consensus 55 ~c~~w~gv~C~~~~~~v~~L~l~~---~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~--L~ls~N 128 (627)
.| +|.|+.|+.+..+|+.+...+ ..+.+.++++.+..++. .|...+|.-++.++- .|...+.|.. ++++.|
T Consensus 77 l~-~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N 153 (267)
T 3rw6_A 77 LK-AVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLN 153 (267)
T ss_dssp HH-HTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTT
T ss_pred HH-hcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCC
Confidence 45 799999997666777666655 34555665544444444 344455555544432 3666677776 788888
Q ss_pred cccccC---chhh--ccccceeccccccccC--CCchhhhccccccccccccccccccCCCCCCC--ccceEeccCCCcc
Q 006884 129 YFSGVL---PAFR--SLQLNALDLSFNAFTG--NIPPGFQNLTRLHLLNLQNNSISGAIPPLNLP--RLKILNFSNNNLN 199 (627)
Q Consensus 129 ~l~~~~---~~~~--~~~L~~L~ls~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~--~L~~L~l~~N~l~ 199 (627)
+..... +... ..+|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++...-..+. +|++|+|++|+++
T Consensus 154 ~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l~L~~L~L~~Npl~ 233 (267)
T 3rw6_A 154 RRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLC 233 (267)
T ss_dssp SHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTSCCSEEECTTSTTG
T ss_pred HHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccCCcceEEccCCcCc
Confidence 644332 2111 1379999999999997 45677889999999999999999752222333 9999999999999
Q ss_pred ccCCC-------cCCCCCCCcccCCCC
Q 006884 200 GSIPD-------SLQTFPNSSFVGNSM 219 (627)
Q Consensus 200 ~~~p~-------~~~~~~~l~~~~n~~ 219 (627)
+.+|+ .+..+++|..++...
T Consensus 234 ~~~~~~~~y~~~il~~~P~L~~LDg~~ 260 (267)
T 3rw6_A 234 DTFRDQSTYISAIRERFPKLLRLDGHE 260 (267)
T ss_dssp GGCSSHHHHHHHHHHHCTTCCEESSCB
T ss_pred cccCcchhHHHHHHHHCcccCeECCcC
Confidence 88874 367889999888543
No 395
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.98 E-value=1.8e-09 Score=111.91 Aligned_cols=141 Identities=17% Similarity=0.215 Sum_probs=104.6
Q ss_pred cccCcCCceEEEEEEEcCCcEEEEEEec--ccc--cCHHHHHHHHHHHHHhcc-CCceeceeeEEeeC---CceeEEEec
Q 006884 340 EVLGKGSYGSTYKAILEDGTTVVVKRLR--EVA--ATKREFEQQMEVVGTIGK-HSNVVPVRAYYYSK---DEKLVVYSY 411 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~--~~~~~~~~e~~~l~~l~~-h~niv~~~~~~~~~---~~~~lv~e~ 411 (627)
+.++.|.++.||+.... +..+++|+.. ... .....+.+|++++..+.. +..+.+++.++.+. +..++||||
T Consensus 44 ~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 56889999999999876 4678888875 332 234578889999999853 34577888887765 347899999
Q ss_pred CCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 006884 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEG------------------------------------ 455 (627)
Q Consensus 412 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------ 455 (627)
++|..+.+.. ...++...+..++.++++.|..||+..
T Consensus 123 v~G~~l~~~~-------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 123 VSGRVLWDQS-------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp CCCBCCCCTT-------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred cCCeecCCCc-------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 9997764311 123677888899999999999999831
Q ss_pred -------------------CCCeeecCCCCCCeEecCCCC--eEEeeccccccc
Q 006884 456 -------------------GAKFTHGNIKSSNVLLTQDLN--GCISDVGLAHLI 488 (627)
Q Consensus 456 -------------------~~~ivH~Dlkp~NILl~~~~~--~ki~DfG~a~~~ 488 (627)
.+.++|+|+++.||+++.++. +.|+||+.+...
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 245999999999999997754 589999988653
No 396
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.92 E-value=9.3e-10 Score=111.21 Aligned_cols=183 Identities=16% Similarity=0.143 Sum_probs=119.1
Q ss_pred cccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCce--eceeeEEeeCC---ceeEEEecCCC
Q 006884 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNV--VPVRAYYYSKD---EKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~ni--v~~~~~~~~~~---~~~lv~e~~~~ 414 (627)
+.++.|....||+.. ..+++|+-... .....+.+|.+++..+..+..+ ..++......+ ..++||++++|
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G 100 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKG 100 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCC
Confidence 457889999999863 45888875432 2346788999999888544433 33443332222 24789999999
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEG--------------------------------------- 455 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~--------------------------------------- 455 (627)
.++...... .++..++..++.++++.+..||+..
T Consensus 101 ~~l~~~~~~-------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 173 (304)
T 3sg8_A 101 VPLTPLLLN-------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV 173 (304)
T ss_dssp EECCHHHHH-------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred eECCccccc-------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence 888653321 2566777788888888888888611
Q ss_pred ----------------CCCeeecCCCCCCeEecC--CCCeEEeecccccccCCCCCCCCCccc---cCccccCC-----C
Q 006884 456 ----------------GAKFTHGNIKSSNVLLTQ--DLNGCISDVGLAHLINFPTTATRTIGY---RAPEVTET-----R 509 (627)
Q Consensus 456 ----------------~~~ivH~Dlkp~NILl~~--~~~~ki~DfG~a~~~~~~~~~~~t~~y---~aPE~~~~-----~ 509 (627)
.+.++|+|++|.||++++ +..+.|+||+.+..............+ ..|+.... +
T Consensus 174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~ 253 (304)
T 3sg8_A 174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYK 253 (304)
T ss_dssp HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHT
T ss_pred HHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcC
Confidence 135899999999999998 456789999988654321100000000 11221100 0
Q ss_pred ---------CCCCcchhHHHHHHHHHHHhCCCCC
Q 006884 510 ---------KASQKSDVYSFGVLLLEMLTGKAPL 534 (627)
Q Consensus 510 ---------~~~~~~Dv~S~Gvvl~el~tg~~pf 534 (627)
+.....+.|++|.++|.+.+|..+|
T Consensus 254 ~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 254 HKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 1122368999999999999998765
No 397
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.88 E-value=2.8e-09 Score=108.97 Aligned_cols=144 Identities=18% Similarity=0.152 Sum_probs=92.9
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccc----cc------------
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYF----SG------------ 132 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l----~~------------ 132 (627)
.+++.|+|++ +++ .|+...|.++++|+.|+|++|.++..-+..|..+.++.++.++.+.. ..
T Consensus 101 ~~L~~l~L~~-~i~-~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 101 QTLEKVILSE-KIK-NIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp TTCCC-CBCT-TCC-EECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred CCCcEEECCc-ccc-chhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 5688899988 777 67777899999999999999988755566666666666665544221 00
Q ss_pred ---------------------------------cCch-----h--hccccceeccccccccCCCchhhhccccccccccc
Q 006884 133 ---------------------------------VLPA-----F--RSLQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQ 172 (627)
Q Consensus 133 ---------------------------------~~~~-----~--~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~ 172 (627)
.+.. + ...+|+.|+|++|+++...+..|.+|++|+.|+|.
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~ 258 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLP 258 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECC
Confidence 0000 0 01367777777777774444567777777777777
Q ss_pred cccccccCCCC--CCCccc-eEeccCCCccccCCCcCCCCCCCcccC
Q 006884 173 NNSISGAIPPL--NLPRLK-ILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 173 ~N~l~~~~~~~--~~~~L~-~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
+| ++...+.. ++.+|+ .|++.+ .++..-+..|.++++|+.+.
T Consensus 259 ~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~ 303 (329)
T 3sb4_A 259 HN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVL 303 (329)
T ss_dssp TT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEE
T ss_pred cc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEE
Confidence 77 55322222 677777 777777 56544456677777776553
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.87 E-value=7.6e-11 Score=122.54 Aligned_cols=130 Identities=20% Similarity=0.147 Sum_probs=58.8
Q ss_pred cEEEEEcCCCCcccccCc---cccC-CCCcccEEEccCCcCCCCCCCCc-CccccccEEeeccccccccCchhh------
Q 006884 70 RVIGIHLPGIGFTGPIPA---NSIG-KLDALKILSLRSNYLNGTLPSDI-TSISSLQYVYLQNNYFSGVLPAFR------ 138 (627)
Q Consensus 70 ~v~~L~l~~~~l~~~~~~---~~~~-~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~ls~N~l~~~~~~~~------ 138 (627)
.++.|+|++|+++..-.. ..+. ..++|+.|+|++|.|+..-...+ ..+++|++|+|++|.|+.......
T Consensus 73 ~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~ 152 (372)
T 3un9_A 73 SLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLH 152 (372)
T ss_dssp TCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHS
T ss_pred hCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHh
Confidence 455566666555432111 0111 12455566666665543211122 234555566666665543322110
Q ss_pred -ccccceeccccccccC----CCchhhhccccccccccccccccccC----CC--CCCCccceEeccCCCcc
Q 006884 139 -SLQLNALDLSFNAFTG----NIPPGFQNLTRLHLLNLQNNSISGAI----PP--LNLPRLKILNFSNNNLN 199 (627)
Q Consensus 139 -~~~L~~L~ls~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~~----~~--~~~~~L~~L~l~~N~l~ 199 (627)
..+|+.|+|++|.|+. .++..+..+++|++|+|++|+|+..- .. ...++|+.|+|++|.++
T Consensus 153 ~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~ 224 (372)
T 3un9_A 153 DQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAG 224 (372)
T ss_dssp TTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCC
T ss_pred cCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCC
Confidence 1245556666665542 12233344555566666666554311 10 03345555666666554
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.80 E-value=3.4e-11 Score=125.13 Aligned_cols=133 Identities=16% Similarity=0.178 Sum_probs=100.0
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCc-----CccccccEEeeccccccccCch-----hh
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDI-----TSISSLQYVYLQNNYFSGVLPA-----FR 138 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~ls~N~l~~~~~~-----~~ 138 (627)
..++.|+|++|+++..-.......+++|+.|+|++|.|+..-...+ ...++|++|+|++|.|+..... +.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 5899999999999754333234457789999999999975433333 2457899999999999763221 12
Q ss_pred -ccccceeccccccccCC----CchhhhccccccccccccccccccCC----CC--CCCccceEeccCCCcccc
Q 006884 139 -SLQLNALDLSFNAFTGN----IPPGFQNLTRLHLLNLQNNSISGAIP----PL--NLPRLKILNFSNNNLNGS 201 (627)
Q Consensus 139 -~~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~~----~~--~~~~L~~L~l~~N~l~~~ 201 (627)
..+|++|+|++|.|+.. ++..+...++|+.|+|++|+|+..-. .. ..++|++|+|++|.|+..
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 24799999999999852 35567788899999999999975322 11 568899999999999744
No 400
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.77 E-value=3.9e-09 Score=107.89 Aligned_cols=146 Identities=10% Similarity=0.094 Sum_probs=105.3
Q ss_pred CcEEEEEcCCCCccc-------------------ccCccccCC--------CCcccEEEccCCcCCCCCCCCcCcccccc
Q 006884 69 SRVIGIHLPGIGFTG-------------------PIPANSIGK--------LDALKILSLRSNYLNGTLPSDITSISSLQ 121 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~-------------------~~~~~~~~~--------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 121 (627)
++++.|||++|++.. .+|...|.+ +++|+.|+|.+ .++..-+..|.++++|+
T Consensus 49 ~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~ 127 (329)
T 3sb4_A 49 PSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLK 127 (329)
T ss_dssp TTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCC
T ss_pred ccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccc
Confidence 567778887777660 466677888 99999999999 88866667899999999
Q ss_pred EEeeccccccccCchhhcc--ccceeccccccc----c----------------------CCCchh--------------
Q 006884 122 YVYLQNNYFSGVLPAFRSL--QLNALDLSFNAF----T----------------------GNIPPG-------------- 159 (627)
Q Consensus 122 ~L~ls~N~l~~~~~~~~~~--~L~~L~ls~N~l----~----------------------~~~p~~-------------- 159 (627)
+|+|++|.+..+.+..+.. ++..+.+..+.. . +.++..
T Consensus 128 ~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l 207 (329)
T 3sb4_A 128 ICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFL 207 (329)
T ss_dssp EEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEE
T ss_pred eEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccccceE
Confidence 9999999998777754432 455555444211 0 011110
Q ss_pred -------------h-hccccccccccccccccccCCCC--CCCccceEeccCCCccccCCCcCCCCCCCc-ccC
Q 006884 160 -------------F-QNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSS-FVG 216 (627)
Q Consensus 160 -------------~-~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~-~~~ 216 (627)
+ ..+++|+.|+|++|+++...+.. ++.+|+.|+|.+| ++..-+..|.++++|+ .+.
T Consensus 208 ~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~ 280 (329)
T 3sb4_A 208 TIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLE 280 (329)
T ss_dssp EEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEE
T ss_pred EEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEE
Confidence 0 13789999999999998544433 8999999999999 7755557799999887 554
No 401
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.56 E-value=2.6e-09 Score=118.41 Aligned_cols=131 Identities=15% Similarity=0.086 Sum_probs=66.1
Q ss_pred CcEEEEEcCCCCcccccCccccCC-CCcccEEEcc----CCcCCCC-----CCCCcCccccccEEeeccc--cccccCch
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGK-LDALKILSLR----SNYLNGT-----LPSDITSISSLQYVYLQNN--YFSGVLPA 136 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~-l~~L~~L~L~----~N~l~~~-----~p~~~~~l~~L~~L~ls~N--~l~~~~~~ 136 (627)
++++.|+|..+++++..+. .++. +++|+.|+|+ .|.+++. ++..+.++++|++|+|+++ .+++....
T Consensus 378 ~~L~~L~l~~~~l~~~~~~-~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~ 456 (592)
T 3ogk_B 378 QELEYMAVYVSDITNESLE-SIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLS 456 (592)
T ss_dssp TTCSEEEEEESCCCHHHHH-HHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHH
T ss_pred ccCeEEEeecCCccHHHHH-HHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHH
Confidence 3455555555555544333 2332 5556666664 4555532 1222444556666666532 23333221
Q ss_pred -hh--ccccceeccccccccC-CCchhhhcccccccccccccccccc-CCCC--CCCccceEeccCCCccc
Q 006884 137 -FR--SLQLNALDLSFNAFTG-NIPPGFQNLTRLHLLNLQNNSISGA-IPPL--NLPRLKILNFSNNNLNG 200 (627)
Q Consensus 137 -~~--~~~L~~L~ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~-~~~~--~~~~L~~L~l~~N~l~~ 200 (627)
+. ..+|+.|+|++|++++ .++..+.++++|+.|+|++|+|++. ++.. .+++|++|+|++|+++.
T Consensus 457 ~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~ 527 (592)
T 3ogk_B 457 YIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASM 527 (592)
T ss_dssp HHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCT
T ss_pred HHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCH
Confidence 11 1246666666666654 2344455666666666666666532 1211 45666666666666653
No 402
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.47 E-value=7.8e-09 Score=114.52 Aligned_cols=143 Identities=12% Similarity=0.044 Sum_probs=94.8
Q ss_pred cEEEEEcCCCC-ccc-ccCccccCCCCcccEEEccCCcCCCC----CCCCcCccccccEEeeccccccccCc----hhhc
Q 006884 70 RVIGIHLPGIG-FTG-PIPANSIGKLDALKILSLRSNYLNGT----LPSDITSISSLQYVYLQNNYFSGVLP----AFRS 139 (627)
Q Consensus 70 ~v~~L~l~~~~-l~~-~~~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~~~~~----~~~~ 139 (627)
+++.|+|++|. ++. .++. ...++++|+.|+|++|.+++. ++..+..+++|++|+|++|.+++... ....
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~-~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~ 217 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLS-IVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIAR 217 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHH-HHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHH-HHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHh
Confidence 49999999886 221 1222 345789999999999998765 33345678999999999999985433 2222
Q ss_pred --cccceeccccccccCCCchhhhcccccccccccccccccc---CCC--CCCCccceEeccCCCccccCCCcCCCCCCC
Q 006884 140 --LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGA---IPP--LNLPRLKILNFSNNNLNGSIPDSLQTFPNS 212 (627)
Q Consensus 140 --~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~---~~~--~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l 212 (627)
.+|+.|+|++|.+.+ +|..+.++++|+.|+++++..... .+. ..+++|+.|+++++.. +.+|..+..+++|
T Consensus 218 ~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L 295 (592)
T 3ogk_B 218 NCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQI 295 (592)
T ss_dssp HCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGC
T ss_pred hCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhcCCC
Confidence 479999999999985 788899999999999986432211 111 1455666666655432 2444444444444
Q ss_pred ccc
Q 006884 213 SFV 215 (627)
Q Consensus 213 ~~~ 215 (627)
+.+
T Consensus 296 ~~L 298 (592)
T 3ogk_B 296 RKL 298 (592)
T ss_dssp CEE
T ss_pred cEE
Confidence 443
No 403
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.44 E-value=7.1e-07 Score=90.59 Aligned_cols=133 Identities=14% Similarity=0.160 Sum_probs=95.5
Q ss_pred cccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhcc--CC-ceeceeeEEeeCCceeEEEecCCCCc
Q 006884 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HS-NVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~--h~-niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
+.++.|....||+. ++.+++|+.... .....+.+|.+++..+.. .+ .+.+++++ +..++||||++|.+
T Consensus 43 ~~l~~G~~n~vy~v----g~~~vlR~~~~~-~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~~ 113 (320)
T 3r70_A 43 RYLSSGDDSDTFLC----NEQYVVKVPKRD-SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGER 113 (320)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSH-HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCBC
T ss_pred EeCCCCCCceEEEE----CCEEEEEeCCcH-HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCcc
Confidence 56889999999997 567888876432 223568899999998843 12 23344443 56789999999988
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC----------------------------------------
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG---------------------------------------- 456 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~---------------------------------------- 456 (627)
+...... .++...+..++.++++.+..||+...
T Consensus 114 l~~~~~~-------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (320)
T 3r70_A 114 ITYEQYH-------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEML 186 (320)
T ss_dssp CCHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred ccccccc-------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccch
Confidence 8643321 25566667777888888888885432
Q ss_pred --------------------CCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 457 --------------------AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 457 --------------------~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
+.++|+|++|.||+++.+..+.|+||+.+...
T Consensus 187 ~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 187 EHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 23599999999999998766799999988654
No 404
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.41 E-value=1.2e-07 Score=92.74 Aligned_cols=100 Identities=20% Similarity=0.226 Sum_probs=57.7
Q ss_pred cCCCCcccE--EEccCCcCCCCCCC----CcCccccccEEeeccccccccC--chhh-c-cccceeccccccccCCCchh
Q 006884 90 IGKLDALKI--LSLRSNYLNGTLPS----DITSISSLQYVYLQNNYFSGVL--PAFR-S-LQLNALDLSFNAFTGNIPPG 159 (627)
Q Consensus 90 ~~~l~~L~~--L~L~~N~l~~~~p~----~~~~l~~L~~L~ls~N~l~~~~--~~~~-~-~~L~~L~ls~N~l~~~~p~~ 159 (627)
|...+.|.. ++++.|... .++. ...++++|++|+|++|+|+++. |... . .+|+.|+|++|+|++. ..
T Consensus 137 l~~dp~L~~~~l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~ 213 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RE 213 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GG
T ss_pred cCCCcchhhcCccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hh
Confidence 445555555 566666332 2222 1134667777777777777643 2322 1 3677777777777753 23
Q ss_pred hhccc--cccccccccccccccCCC---------CCCCccceEe
Q 006884 160 FQNLT--RLHLLNLQNNSISGAIPP---------LNLPRLKILN 192 (627)
Q Consensus 160 ~~~l~--~L~~L~l~~N~l~~~~~~---------~~~~~L~~L~ 192 (627)
+..+. +|++|+|++|.+++.+|. ..+++|+.||
T Consensus 214 l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 214 LDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 44444 777777777777766653 1567777665
No 405
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.39 E-value=2.1e-06 Score=84.70 Aligned_cols=136 Identities=15% Similarity=0.215 Sum_probs=96.6
Q ss_pred ccCcCCce-EEEEEEEc-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcHH
Q 006884 341 VLGKGSYG-STYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 341 ~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 418 (627)
.+..|..| .||+.... ++..+++|+-... ...++.+|...+..+..+--+.++++++.+.+..++|||+++|.++.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~ 108 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAF 108 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccc
Confidence 34445554 68988755 4667899976432 34568889999998866656778889988888999999999998877
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------------
Q 006884 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEG------------------------------------------- 455 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------------- 455 (627)
+...... .....++.+++..|.-||+..
T Consensus 109 ~~~~~~~---------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 109 QVLEEYP---------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp HHHHHCG---------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred ccccCCH---------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 6543221 122344555556666666421
Q ss_pred ------------CCCeeecCCCCCCeEecCCCCeEEeecccccc
Q 006884 456 ------------GAKFTHGNIKSSNVLLTQDLNGCISDVGLAHL 487 (627)
Q Consensus 456 ------------~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~ 487 (627)
.+.++|+|+.+.|||++.++.+-|+||+.+..
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12379999999999999877777999998753
No 406
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.37 E-value=1.6e-08 Score=93.94 Aligned_cols=111 Identities=11% Similarity=0.122 Sum_probs=65.9
Q ss_pred ccCCCCcccEEEccCC-cCCCC----CCCCcCccccccEEeeccccccccCc----hhh-c-cccceeccccccccCC--
Q 006884 89 SIGKLDALKILSLRSN-YLNGT----LPSDITSISSLQYVYLQNNYFSGVLP----AFR-S-LQLNALDLSFNAFTGN-- 155 (627)
Q Consensus 89 ~~~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~ls~N~l~~~~~----~~~-~-~~L~~L~ls~N~l~~~-- 155 (627)
.+...++|+.|+|++| .|... +...+...++|++|+|++|.|...-. ... . .+|++|+|++|.|+..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 4566677777777777 66521 22334445677777777777654211 111 1 3577777777777632
Q ss_pred --Cchhhhcccccccccc--ccccccccCC----CC--CCCccceEeccCCCcc
Q 006884 156 --IPPGFQNLTRLHLLNL--QNNSISGAIP----PL--NLPRLKILNFSNNNLN 199 (627)
Q Consensus 156 --~p~~~~~l~~L~~L~l--~~N~l~~~~~----~~--~~~~L~~L~l~~N~l~ 199 (627)
+...+...++|++|+| ++|.|...-. .. ..++|++|+|++|.+.
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3345566667777777 6677764211 11 4467788888887764
No 407
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.34 E-value=3e-06 Score=85.29 Aligned_cols=136 Identities=16% Similarity=0.111 Sum_probs=89.9
Q ss_pred cccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCC--ceeceeeEEe-eCCceeEEEecCCCCc
Q 006884 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHS--NVVPVRAYYY-SKDEKLVVYSYMPAGS 416 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~--niv~~~~~~~-~~~~~~lv~e~~~~gs 416 (627)
+.++.|....||+. +..+++|+-.. ......+.+|.+++..+..|- .+..++.+.. ..+..++||||++|..
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~-~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~ 99 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS-QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQI 99 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS-HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC-chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeE
Confidence 45778888899987 56688887432 223467899999999995542 2445566654 3455789999999988
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc------------------------------------------
Q 006884 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE------------------------------------------ 454 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~------------------------------------------ 454 (627)
+...... .++...+..++.++++.|..||+.
T Consensus 100 l~~~~~~-------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l 172 (306)
T 3tdw_A 100 LGEDGMA-------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL 172 (306)
T ss_dssp CHHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred Cchhhhh-------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence 7653211 123334444444444444444432
Q ss_pred ---------------CCCCeeecCCCCCCeEecC---CCCe-EEeecccccc
Q 006884 455 ---------------GGAKFTHGNIKSSNVLLTQ---DLNG-CISDVGLAHL 487 (627)
Q Consensus 455 ---------------~~~~ivH~Dlkp~NILl~~---~~~~-ki~DfG~a~~ 487 (627)
..+.++|+|+++.||+++. ++.+ .|+||+.+..
T Consensus 173 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 173 TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2235799999999999987 4554 7999998754
No 408
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.23 E-value=3.3e-06 Score=84.07 Aligned_cols=141 Identities=20% Similarity=0.260 Sum_probs=90.3
Q ss_pred cccCcCCceEEEEEEEcCCcEEEEEEecccc-cCHHHHHHHHHHHHHhccC--CceeceeeEEeeCCceeEEEecCCCCc
Q 006884 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKH--SNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h--~niv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
+.|+.|.++.||++...+|+.+++|+..... .....|..|++.+..+..+ ..+.+++++. ..++||||++++.
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~ 96 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCC
Confidence 5689999999999998889999999865322 2346789999999999432 2466676653 4689999999986
Q ss_pred HH--------H---HhhhcCCCC----------------CCCCCHHHHHH---H-----------------HHHHHHHHH
Q 006884 417 LF--------M---LLHRNRSDG----------------GTALDWNSRMK---I-----------------ALGTARGIA 449 (627)
Q Consensus 417 L~--------~---~l~~~~~~~----------------~~~l~~~~~~~---i-----------------~~~ia~~l~ 449 (627)
+. . .+|...... .-.-+|..... + ...+-+.+.
T Consensus 97 ~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l~~ 176 (288)
T 3d1u_A 97 PTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKVLD 176 (288)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 42 1 223221100 00124543210 0 111122233
Q ss_pred HHH----hcCCCCeeecCCCCCCeEecCCCCeEEeeccccc
Q 006884 450 FIH----SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH 486 (627)
Q Consensus 450 ~LH----~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 486 (627)
.+. ....+.++|+|+.+.||+++.+ .+.|+|| .+.
T Consensus 177 ~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~ 215 (288)
T 3d1u_A 177 ALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAH 215 (288)
T ss_dssp THHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCE
T ss_pred HHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcC
Confidence 333 1234679999999999999884 5889999 553
No 409
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.21 E-value=5.5e-08 Score=107.62 Aligned_cols=124 Identities=21% Similarity=0.188 Sum_probs=71.1
Q ss_pred CCCCcccEEEccCCcCCCCCCCCcC-ccccccEEeeccc-ccccc-Cchhh--ccccceeccccccccCCCchhhh----
Q 006884 91 GKLDALKILSLRSNYLNGTLPSDIT-SISSLQYVYLQNN-YFSGV-LPAFR--SLQLNALDLSFNAFTGNIPPGFQ---- 161 (627)
Q Consensus 91 ~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~ls~N-~l~~~-~~~~~--~~~L~~L~ls~N~l~~~~p~~~~---- 161 (627)
..+++|+.|+|++|.+++..+..+. .+++|++|+|++| .++.. ++.+. ..+|++|+|++|.+++..+..+.
T Consensus 102 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~ 181 (594)
T 2p1m_B 102 SSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPD 181 (594)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCT
T ss_pred HhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhh
Confidence 3566777777777777655555554 5677777777777 44332 22222 13677777777776654444333
Q ss_pred ccccccccccccccccccCCC-----C--CCCccceEeccCCCccccCCCcCCCCCCCcccC
Q 006884 162 NLTRLHLLNLQNNSISGAIPP-----L--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 162 ~l~~L~~L~l~~N~l~~~~~~-----~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
.+++|+.|++++|. +.+.. . .+++|+.|++++|...+.+|..+.++++|+.++
T Consensus 182 ~~~~L~~L~l~~~~--~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~ 241 (594)
T 2p1m_B 182 TYTSLVSLNISCLA--SEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELG 241 (594)
T ss_dssp TCCCCCEEECTTCC--SCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEE
T ss_pred cCCcCcEEEecccC--CcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcc
Confidence 45577777777775 11111 0 356777777777632223555555555555554
No 410
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.19 E-value=8.9e-08 Score=105.97 Aligned_cols=107 Identities=12% Similarity=0.061 Sum_probs=53.8
Q ss_pred CCCcccEEEccCCcCCCCCCCCcC-ccccccEEeec--c----ccccccCch------hhc-cccceeccccccccCCCc
Q 006884 92 KLDALKILSLRSNYLNGTLPSDIT-SISSLQYVYLQ--N----NYFSGVLPA------FRS-LQLNALDLSFNAFTGNIP 157 (627)
Q Consensus 92 ~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~ls--~----N~l~~~~~~------~~~-~~L~~L~ls~N~l~~~~p 157 (627)
.+++|+.|+++.|.+++..+..+. .+++|++|+|+ + |.++..+.. +.. .+|+.|+|++ .+++..+
T Consensus 370 ~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~ 448 (594)
T 2p1m_B 370 GCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVF 448 (594)
T ss_dssp HCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHH
T ss_pred hchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHH
Confidence 356666666666666544333343 35666666666 3 444432221 111 2466666654 4443333
Q ss_pred hhhhc-cccccccccccccccccCCC---CCCCccceEeccCCCcc
Q 006884 158 PGFQN-LTRLHLLNLQNNSISGAIPP---LNLPRLKILNFSNNNLN 199 (627)
Q Consensus 158 ~~~~~-l~~L~~L~l~~N~l~~~~~~---~~~~~L~~L~l~~N~l~ 199 (627)
..+.. +++|+.|+|++|.+++.... ..+++|+.|+|++|+++
T Consensus 449 ~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~ 494 (594)
T 2p1m_B 449 EYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFG 494 (594)
T ss_dssp HHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCC
T ss_pred HHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCc
Confidence 33443 55566666666665432221 13556666666666654
No 411
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.14 E-value=4.7e-06 Score=85.80 Aligned_cols=79 Identities=14% Similarity=0.114 Sum_probs=55.2
Q ss_pred ccc-CcCCceEEEEEEEc-------CCcEEEEEEecccc---c-CHHHHHHHHHHHHHhccC--CceeceeeEEeeC---
Q 006884 340 EVL-GKGSYGSTYKAILE-------DGTTVVVKRLREVA---A-TKREFEQQMEVVGTIGKH--SNVVPVRAYYYSK--- 402 (627)
Q Consensus 340 ~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~-~~~~~~~e~~~l~~l~~h--~niv~~~~~~~~~--- 402 (627)
+.| +.|....+|+.... ++..+++|+-.... . ....+.+|++++..+..+ -.+.+++.++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 457 78888999998754 26678898765432 1 234678888888888655 3466677776554
Q ss_pred CceeEEEecCCCCcHH
Q 006884 403 DEKLVVYSYMPAGSLF 418 (627)
Q Consensus 403 ~~~~lv~e~~~~gsL~ 418 (627)
+..++||||++|..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 3468999999886654
No 412
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.14 E-value=1.8e-07 Score=86.84 Aligned_cols=108 Identities=18% Similarity=0.204 Sum_probs=81.2
Q ss_pred CcEEEEEcCCC-Ccccc----cCccccCCCCcccEEEccCCcCCCC----CCCCcCccccccEEeeccccccccCc----
Q 006884 69 SRVIGIHLPGI-GFTGP----IPANSIGKLDALKILSLRSNYLNGT----LPSDITSISSLQYVYLQNNYFSGVLP---- 135 (627)
Q Consensus 69 ~~v~~L~l~~~-~l~~~----~~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~~~~~---- 135 (627)
..++.|+|++| ++... +.. .+...++|+.|+|++|.|... +...+...++|++|+|++|.|+..--
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~-~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAE-ALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHH-HHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHH-HHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 67999999999 88642 333 577789999999999999742 23334556889999999999986421
Q ss_pred -hhhc-cccceecc--ccccccCC----Cchhhhcccccccccccccccc
Q 006884 136 -AFRS-LQLNALDL--SFNAFTGN----IPPGFQNLTRLHLLNLQNNSIS 177 (627)
Q Consensus 136 -~~~~-~~L~~L~l--s~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 177 (627)
.+.. .+|++|+| ++|.|+.. +...+...++|++|+|++|++.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 1221 37999999 88999753 3345566689999999999986
No 413
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.13 E-value=1.2e-05 Score=82.82 Aligned_cols=144 Identities=13% Similarity=0.069 Sum_probs=87.9
Q ss_pred cccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCC-ceeceeeEEeeC-CceeEEEecCCCCcH
Q 006884 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHS-NVVPVRAYYYSK-DEKLVVYSYMPAGSL 417 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~-niv~~~~~~~~~-~~~~lv~e~~~~gsL 417 (627)
+.++.|....+|+... ++..+++|..... ..+..|..++..+..+. .+.+++.++... +..++||||++|.++
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~l 121 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSCA----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTL 121 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESCC----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEET
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCch----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCCc
Confidence 5678899999999886 4788999976432 35889999999985432 245566666554 567899999998655
Q ss_pred HH------------------HhhhcCCCC--C----------CCCCHHHHH---------------------HHHHHHHH
Q 006884 418 FM------------------LLHRNRSDG--G----------TALDWNSRM---------------------KIALGTAR 446 (627)
Q Consensus 418 ~~------------------~l~~~~~~~--~----------~~l~~~~~~---------------------~i~~~ia~ 446 (627)
.+ .++...... + ..-+|.... .....+..
T Consensus 122 ~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 201 (362)
T 3ovc_A 122 QDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQALDE 201 (362)
T ss_dssp TTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHHHHH
Confidence 31 111111000 0 000121110 11111222
Q ss_pred HHHHHHhcC-CCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 447 GIAFIHSEG-GAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 447 ~l~~LH~~~-~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
.+.++.... .+.++|+|+++.||++++++.+.|+||+.+...
T Consensus 202 l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 202 LMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 222332111 145899999999999988777889999988654
No 414
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.12 E-value=4.5e-06 Score=87.31 Aligned_cols=76 Identities=16% Similarity=0.177 Sum_probs=42.8
Q ss_pred cEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhh-cc-ccceecc
Q 006884 70 RVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFR-SL-QLNALDL 147 (627)
Q Consensus 70 ~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~-~~-~L~~L~l 147 (627)
.++.+.|.+ ++. .++...|.++++|+.++|++|+++ .+|......++|+.+.|.+| +..+....+ .. +|+.++|
T Consensus 158 ~L~~i~lp~-~l~-~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l 233 (401)
T 4fdw_A 158 TVQEIVFPS-TLE-QLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEI 233 (401)
T ss_dssp CCCEEECCT-TCC-EECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEEC
T ss_pred CceEEEeCC-Ccc-EehHHHhhCcccCCeeecCCCcce-EechhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEec
Confidence 466777764 554 455557777777777777777776 33333223466666666533 444433222 22 4555555
Q ss_pred cc
Q 006884 148 SF 149 (627)
Q Consensus 148 s~ 149 (627)
.+
T Consensus 234 ~~ 235 (401)
T 4fdw_A 234 PE 235 (401)
T ss_dssp CT
T ss_pred CC
Confidence 54
No 415
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.08 E-value=6.4e-07 Score=92.16 Aligned_cols=144 Identities=14% Similarity=0.222 Sum_probs=80.6
Q ss_pred CcEEEEEcCCCCcc---------cccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCch-hh
Q 006884 69 SRVIGIHLPGIGFT---------GPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPA-FR 138 (627)
Q Consensus 69 ~~v~~L~l~~~~l~---------~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~-~~ 138 (627)
++++.|.+..+... +.+.. .+..+++|+.|+|++|.-. .+|. + .+++|+.|+|..|.++...-. +.
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~-ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~ 214 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSP-VLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDIL 214 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHH-HHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHH
T ss_pred chhhheeecCcchhhcccccccccCHHH-HHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHH
Confidence 46777777554321 12333 5567788888888776311 2333 3 377888888877776533211 11
Q ss_pred ---ccccceecccc--ccccCC-----Cchhh--hccccccccccccccccccCCC-----CCCCccceEeccCCCcccc
Q 006884 139 ---SLQLNALDLSF--NAFTGN-----IPPGF--QNLTRLHLLNLQNNSISGAIPP-----LNLPRLKILNFSNNNLNGS 201 (627)
Q Consensus 139 ---~~~L~~L~ls~--N~l~~~-----~p~~~--~~l~~L~~L~l~~N~l~~~~~~-----~~~~~L~~L~l~~N~l~~~ 201 (627)
..+|+.|+|+. |...|. +...+ ..+++|+.|+|++|.+.+..+. ..+++|+.|+|+.|.+++.
T Consensus 215 ~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~ 294 (362)
T 2ra8_A 215 GSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDE 294 (362)
T ss_dssp HSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHH
T ss_pred HccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChH
Confidence 13677777753 222111 11122 2467788888888877643221 1467788888888877652
Q ss_pred ----CCCcCCCCCCCcccC
Q 006884 202 ----IPDSLQTFPNSSFVG 216 (627)
Q Consensus 202 ----~p~~~~~~~~l~~~~ 216 (627)
++..+.++++|..++
T Consensus 295 G~~~L~~~L~~l~~L~~L~ 313 (362)
T 2ra8_A 295 GARLLLDHVDKIKHLKFIN 313 (362)
T ss_dssp HHHHHHTTHHHHTTCSEEE
T ss_pred HHHHHHhhcccCCcceEEE
Confidence 344444555665554
No 416
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.03 E-value=1.2e-05 Score=84.13 Aligned_cols=138 Identities=11% Similarity=0.098 Sum_probs=93.0
Q ss_pred cEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc-cccceeccc
Q 006884 70 RVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALDLS 148 (627)
Q Consensus 70 ~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~-~~L~~L~ls 148 (627)
+++.+.|+.+ ++ .|+...|.+ .+|+.++|.+ .++..-+..|.++++|+.++|++|+++.+....+. .+|+.+.|.
T Consensus 136 ~L~~i~l~~~-i~-~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~~~~L~~l~lp 211 (401)
T 4fdw_A 136 QIAKVVLNEG-LK-SIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFVYAGIEEVLLP 211 (401)
T ss_dssp CCSEEECCTT-CC-EECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTTTCCCSEEECC
T ss_pred CccEEEeCCC-cc-EECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEeecccCEEEeC
Confidence 4777777665 55 566667777 4688888886 66655567888888888888888888887775433 478888887
Q ss_pred cccccCCCchhhhccccccccccccccccccCCC-C-CCCccceEeccCCCccccCCCcCCCCCCCccc
Q 006884 149 FNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPP-L-NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV 215 (627)
Q Consensus 149 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~-~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~ 215 (627)
+| ++..-...|.++++|+.+++.+| ++ .++. . .-.+|+.+.+ .|.++..-+..|.++++|+.+
T Consensus 212 ~~-l~~I~~~aF~~~~~L~~l~l~~~-l~-~I~~~aF~~~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l 276 (401)
T 4fdw_A 212 VT-LKEIGSQAFLKTSQLKTIEIPEN-VS-TIGQEAFRESGITTVKL-PNGVTNIASRAFYYCPELAEV 276 (401)
T ss_dssp TT-CCEECTTTTTTCTTCCCEECCTT-CC-EECTTTTTTCCCSEEEE-ETTCCEECTTTTTTCTTCCEE
T ss_pred Cc-hheehhhHhhCCCCCCEEecCCC-cc-CccccccccCCccEEEe-CCCccEEChhHhhCCCCCCEE
Confidence 54 66455567888888888888765 33 2222 1 2256777777 344543334566666666544
No 417
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.00 E-value=3.9e-05 Score=78.19 Aligned_cols=143 Identities=15% Similarity=0.203 Sum_probs=81.0
Q ss_pred cccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccC-Cceeceee------EEeeCCceeEEEecC
Q 006884 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKH-SNVVPVRA------YYYSKDEKLVVYSYM 412 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h-~niv~~~~------~~~~~~~~~lv~e~~ 412 (627)
+.|+.|..+.||+....+| .+++|+... ...++..|.+++..+..+ -.+..++. +....+..+++++|+
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~---~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHR---PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECS---CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCC---CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 4566677899999987654 588998864 234455566666655322 12233332 112456678999999
Q ss_pred CCCcHH--------------HHhhhcCCCC----C-----CCCCHHHHH-------------------------------
Q 006884 413 PAGSLF--------------MLLHRNRSDG----G-----TALDWNSRM------------------------------- 438 (627)
Q Consensus 413 ~~gsL~--------------~~l~~~~~~~----~-----~~l~~~~~~------------------------------- 438 (627)
+|..+. ..+|...... . ..-.|....
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 986432 1122211100 0 112343210
Q ss_pred HHHHHHHHHHHHHHh--------c--CCCCeeecCCCCCCeEecCCCCeEEeeccccc
Q 006884 439 KIALGTARGIAFIHS--------E--GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH 486 (627)
Q Consensus 439 ~i~~~ia~~l~~LH~--------~--~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 486 (627)
.+...+..++.+|+. . ....++|+|+++.||+++.++.+.|+||+.+.
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 011123345666763 1 23469999999999999888899999999764
No 418
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.89 E-value=8.9e-05 Score=77.39 Aligned_cols=74 Identities=14% Similarity=0.170 Sum_probs=48.8
Q ss_pred cccCcCCceEEEEEEEc-CCcEEEEEEecccc--------cCHHHHHHHHHHHHHhccC-Ccee-ceeeEEeeCCceeEE
Q 006884 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--------ATKREFEQQMEVVGTIGKH-SNVV-PVRAYYYSKDEKLVV 408 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~e~~~l~~l~~h-~niv-~~~~~~~~~~~~~lv 408 (627)
+.+|.|..+.||++... +++.++||...... .....+..|.+++..+..+ +..+ +++.+ +.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 57899999999999754 46889999764321 1234567788888887543 3333 44433 45566899
Q ss_pred EecCCCC
Q 006884 409 YSYMPAG 415 (627)
Q Consensus 409 ~e~~~~g 415 (627)
|||+++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999774
No 419
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.86 E-value=0.0001 Score=73.99 Aligned_cols=140 Identities=16% Similarity=0.159 Sum_probs=91.8
Q ss_pred cccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccC--CceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKH--SNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h--~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
+.|+.|....+|+... ++..+++|+.... ....+..|.+.+..+..+ ..+.+++.+....+..++||||+++..+
T Consensus 42 ~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~ 118 (312)
T 3jr1_A 42 EKLYSGEMNEIWLIND-EVQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN 118 (312)
T ss_dssp EEECCSSSSEEEEEES-SSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred EEeCCccceeeeEEEE-CCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence 4578899999999886 4678889986542 356788999999888644 5677888888777889999999998754
Q ss_pred H-----------HHhhhcCC--CCC---------------CCCCHHHHH---HHHHH----------------HHHH-HH
Q 006884 418 F-----------MLLHRNRS--DGG---------------TALDWNSRM---KIALG----------------TARG-IA 449 (627)
Q Consensus 418 ~-----------~~l~~~~~--~~~---------------~~l~~~~~~---~i~~~----------------ia~~-l~ 449 (627)
. ..++.... .-+ -.-+|.... ++..+ +... ..
T Consensus 119 ~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~~ 198 (312)
T 3jr1_A 119 KQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVAD 198 (312)
T ss_dssp CTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 1 12333211 000 012564332 11111 1111 22
Q ss_pred HHHh-cCCCCeeecCCCCCCeEecCCCCeEEeecc
Q 006884 450 FIHS-EGGAKFTHGNIKSSNVLLTQDLNGCISDVG 483 (627)
Q Consensus 450 ~LH~-~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG 483 (627)
.|.. ...+.++|+|+.+.|++++.++ +.|.|+.
T Consensus 199 ~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 199 TLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 3322 2246799999999999999887 8888974
No 420
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.80 E-value=1.8e-06 Score=88.82 Aligned_cols=147 Identities=12% Similarity=0.146 Sum_probs=95.0
Q ss_pred CCcEEEEEcCCCCccc-cc-------CccccCCCCcccEEEccCCcCC---------CCCCCCcCccccccEEeeccccc
Q 006884 68 RSRVIGIHLPGIGFTG-PI-------PANSIGKLDALKILSLRSNYLN---------GTLPSDITSISSLQYVYLQNNYF 130 (627)
Q Consensus 68 ~~~v~~L~l~~~~l~~-~~-------~~~~~~~l~~L~~L~L~~N~l~---------~~~p~~~~~l~~L~~L~ls~N~l 130 (627)
..+|+.|.+...+..| +. .. ++.+|++|+.|.|..+... +.++..+..+++|+.|+|++|.-
T Consensus 106 ~~~v~~L~lg~~~~~~~~~~~~~~~L~~-s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~ 184 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEGEDCSDIADGIVE-NKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNN 184 (362)
T ss_dssp GGGCSEEEECCCCSSSCCSHHHHHHHHT-THHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBT
T ss_pred chhcceEEEcccccCCCcHHHHHHHHHH-hhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCC
Confidence 4578899988776553 21 22 3567899999999876442 12333446679999999999842
Q ss_pred cccCchhhccccceeccccccccCCCchhhh--cccccccccccc--cccccc---------CCCCCCCccceEeccCCC
Q 006884 131 SGVLPAFRSLQLNALDLSFNAFTGNIPPGFQ--NLTRLHLLNLQN--NSISGA---------IPPLNLPRLKILNFSNNN 197 (627)
Q Consensus 131 ~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~--~l~~L~~L~l~~--N~l~~~---------~~~~~~~~L~~L~l~~N~ 197 (627)
... +.+...+|+.|+|..|.++...-..+. .+++|+.|+|+. |...+. +....+++|+.|+|++|.
T Consensus 185 l~l-~~~~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~ 263 (362)
T 2ra8_A 185 LSI-GKKPRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAE 263 (362)
T ss_dssp CBC-CSCBCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCT
T ss_pred cee-ccccCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCC
Confidence 222 333345899999999888743333444 689999999863 332222 111258999999999999
Q ss_pred ccccCCCcC---CCCCCCcccC
Q 006884 198 LNGSIPDSL---QTFPNSSFVG 216 (627)
Q Consensus 198 l~~~~p~~~---~~~~~l~~~~ 216 (627)
+....+..+ ..+++|+.++
T Consensus 264 i~~~~~~~la~a~~~~~L~~Ld 285 (362)
T 2ra8_A 264 EQNVVVEMFLESDILPQLETMD 285 (362)
T ss_dssp THHHHHHHHHHCSSGGGCSEEE
T ss_pred CchHHHHHHHhCccCCCCCEEE
Confidence 875433222 2345555554
No 421
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.67 E-value=0.00022 Score=70.78 Aligned_cols=73 Identities=22% Similarity=0.306 Sum_probs=52.9
Q ss_pred cccCcCCceEEEEEEEcCCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCc--eeceeeEEeeCCceeEEEecCCCCc
Q 006884 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSN--VVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~h~n--iv~~~~~~~~~~~~~lv~e~~~~gs 416 (627)
+.+|.|..+.||+.+..||+.|++|+-.... .....|..|.+.+..+.+... +.+++++ +..++||||++++.
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECCCCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEeecccC
Confidence 5689999999999999999999999865432 234568899999998854322 3334433 23468999998764
No 422
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.61 E-value=0.0005 Score=72.23 Aligned_cols=74 Identities=14% Similarity=0.164 Sum_probs=47.8
Q ss_pred CCeeecCCCCCCeEecCCCCeEEeecccccccCCCCCC---C--CCccccCccccCCC---CCCCcchhHHHHHHHHHHH
Q 006884 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTA---T--RTIGYRAPEVTETR---KASQKSDVYSFGVLLLEML 528 (627)
Q Consensus 457 ~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~~---~--~t~~y~aPE~~~~~---~~~~~~Dv~S~Gvvl~el~ 528 (627)
+.++|+|+++.|||++.++ ++|+||+.+......... . -...|.+|+..... ......++......+|+.+
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 310 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNLF 310 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHH
Confidence 5699999999999998876 999999988654321000 0 01246666655321 1122355667888888877
Q ss_pred hCC
Q 006884 529 TGK 531 (627)
Q Consensus 529 tg~ 531 (627)
+++
T Consensus 311 ~~~ 313 (420)
T 2pyw_A 311 NKR 313 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 423
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.51 E-value=0.00092 Score=67.51 Aligned_cols=145 Identities=17% Similarity=0.123 Sum_probs=83.7
Q ss_pred ccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCC-ceeceeeE-----EeeCCceeEEEecCCC
Q 006884 341 VLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHS-NVVPVRAY-----YYSKDEKLVVYSYMPA 414 (627)
Q Consensus 341 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~-niv~~~~~-----~~~~~~~~lv~e~~~~ 414 (627)
.++ |....||+....+|+.+++|...........+..|..++..+..+. .+.+++.. ....+..+++++|++|
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G 111 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG 111 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCC
Confidence 455 7778999988777778999998644445677888888888885432 13334332 1224456789999987
Q ss_pred CcHH-----H---------HhhhcCCC----CCCCCCHHHH----HHH---------------HHHHHHHHHHHHhc---
Q 006884 415 GSLF-----M---------LLHRNRSD----GGTALDWNSR----MKI---------------ALGTARGIAFIHSE--- 454 (627)
Q Consensus 415 gsL~-----~---------~l~~~~~~----~~~~l~~~~~----~~i---------------~~~ia~~l~~LH~~--- 454 (627)
..+. . .+|..... .....++... ..+ ...+...+..+...
T Consensus 112 ~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 191 (328)
T 1zyl_A 112 RQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWRE 191 (328)
T ss_dssp EECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 5431 0 11211100 0112232211 001 01111223333321
Q ss_pred -CCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 455 -GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 455 -~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
....++|+|+++.||+++ + .+.|+||+.+...
T Consensus 192 ~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g 224 (328)
T 1zyl_A 192 DFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARNG 224 (328)
T ss_dssp CSCCEECCSSCSGGGEEES-S-SEEECCCTTCCEE
T ss_pred cCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCcC
Confidence 224589999999999999 4 8899999877543
No 424
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.33 E-value=0.0011 Score=68.29 Aligned_cols=144 Identities=11% Similarity=0.118 Sum_probs=84.2
Q ss_pred cccCcCCceEEEEEEEc--------CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEec
Q 006884 340 EVLGKGSYGSTYKAILE--------DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
+.+..|-...+|+.... +++.+++|+..........+.+|.++++.+..+.-..++++++.+ .+|+||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~ 131 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQY 131 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEEC
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEE
Confidence 45666777889998864 247899998644333456677899999888665545566665532 289999
Q ss_pred CCCCcHHH-----------------HhhhcCCCCCCCCC--HHHHHHHHHHHH-------------------HHHHHH--
Q 006884 412 MPAGSLFM-----------------LLHRNRSDGGTALD--WNSRMKIALGTA-------------------RGIAFI-- 451 (627)
Q Consensus 412 ~~~gsL~~-----------------~l~~~~~~~~~~l~--~~~~~~i~~~ia-------------------~~l~~L-- 451 (627)
++|.++.. -+|......+.... |.+..++..++. ..+.+|
T Consensus 132 i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~ 211 (379)
T 3feg_A 132 IPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRK 211 (379)
T ss_dssp CSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHH
T ss_pred ecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHH
Confidence 98855421 11221111122222 334443433321 123333
Q ss_pred --HhcC-CCCeeecCCCCCCeEecCC----CCeEEeecccccc
Q 006884 452 --HSEG-GAKFTHGNIKSSNVLLTQD----LNGCISDVGLAHL 487 (627)
Q Consensus 452 --H~~~-~~~ivH~Dlkp~NILl~~~----~~~ki~DfG~a~~ 487 (627)
.... ...++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 212 ~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 212 LLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2222 2358999999999999876 7899999998753
No 425
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.19 E-value=0.0011 Score=66.25 Aligned_cols=71 Identities=10% Similarity=0.014 Sum_probs=43.2
Q ss_pred cccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecC-CCCcH
Q 006884 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYM-PAGSL 417 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~-~~gsL 417 (627)
+.|+.|....+|+. ..+++|+............+|.+++..+..+.-..+++++ ..+.-++++||+ ++-++
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQTM 95 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEEC
T ss_pred eEcCCcccccccee-----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCccC
Confidence 56888999999998 4588887754321112235677777777544323444443 344457899999 55443
No 426
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.16 E-value=0.0027 Score=63.83 Aligned_cols=145 Identities=10% Similarity=0.081 Sum_probs=80.3
Q ss_pred cccCcCCceEEEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCc-eeceeeE------EeeCCceeEEEecC
Q 006884 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSN-VVPVRAY------YYSKDEKLVVYSYM 412 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~n-iv~~~~~------~~~~~~~~lv~e~~ 412 (627)
+.|+.|....+|+....+| .+++|..... ....++..|.+++..+..+.- +.+++.. ....+..+++++|+
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l 105 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFL 105 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeC
Confidence 4567788889999987655 5788887642 123456677888877754321 2223211 12235568999999
Q ss_pred CCCcHHH--------------HhhhcCCCCC-------CCCCHHHHHH------------HHHHHHHHHHHHHhc----C
Q 006884 413 PAGSLFM--------------LLHRNRSDGG-------TALDWNSRMK------------IALGTARGIAFIHSE----G 455 (627)
Q Consensus 413 ~~gsL~~--------------~l~~~~~~~~-------~~l~~~~~~~------------i~~~ia~~l~~LH~~----~ 455 (627)
+|..+.. .++.....-. ....|..... +...+...+.+++.. .
T Consensus 106 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~ 185 (322)
T 2ppq_A 106 EGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDL 185 (322)
T ss_dssp CCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSS
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcccC
Confidence 8854310 1222111000 0012332111 011244456666532 1
Q ss_pred CCCeeecCCCCCCeEecCCCCeEEeeccccc
Q 006884 456 GAKFTHGNIKSSNVLLTQDLNGCISDVGLAH 486 (627)
Q Consensus 456 ~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 486 (627)
...++|+|+++.||+++++..+.|+||+.+.
T Consensus 186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 186 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 2358999999999999987666899999764
No 427
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.15 E-value=0.0014 Score=66.48 Aligned_cols=145 Identities=13% Similarity=0.077 Sum_probs=73.4
Q ss_pred cccCcCCceE-EEEEEEcCCcEEEEEEecccccCHHHHHHHHHHHHHhccCC-ceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 340 EVLGKGSYGS-TYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHS-NVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 340 ~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~-niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
+.|+.|+... +|+....++..+++|...... ..++..|++++..+..+. .+.+++.+.. ... +++||++.+..+
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~--~~~~~~e~~~l~~L~~~g~~vP~v~~~d~-~~g-~ll~e~l~~~~l 99 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE--GGDTQPFVDLAQYLRNLDISAPEIYAEEH-ARG-LLLIEDLGDALF 99 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT--TCCSHHHHHHHHHHHHTTCBCCCEEEEET-TTT-EEEECCCCSCBH
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC--CccccHHHHHHHHHHhCCCCCCceeeecC-CCC-EEEEeeCCCcch
Confidence 3455554444 667765446777777643321 133456677777775442 2445555532 223 789999977666
Q ss_pred HHHhhhcC---------------------CCCCCCCCHHHHH--------------------HHHHHHHHHHHHHHh---
Q 006884 418 FMLLHRNR---------------------SDGGTALDWNSRM--------------------KIALGTARGIAFIHS--- 453 (627)
Q Consensus 418 ~~~l~~~~---------------------~~~~~~l~~~~~~--------------------~i~~~ia~~l~~LH~--- 453 (627)
.+++.... ......++..... .....+...+..+..
T Consensus 100 ~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~ 179 (333)
T 3csv_A 100 TEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQL 179 (333)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 54443210 0000112111000 000111222233311
Q ss_pred cCCCCeeecCCCCCCeEecCC----CCeEEeeccccccc
Q 006884 454 EGGAKFTHGNIKSSNVLLTQD----LNGCISDVGLAHLI 488 (627)
Q Consensus 454 ~~~~~ivH~Dlkp~NILl~~~----~~~ki~DfG~a~~~ 488 (627)
.....++|||+.+.||+++.+ +.+.|+||+.+...
T Consensus 180 ~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 180 EGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred cCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 123469999999999999875 67899999987654
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.06 E-value=0.00019 Score=64.96 Aligned_cols=81 Identities=7% Similarity=0.073 Sum_probs=39.8
Q ss_pred cccEEEccCCcCCCCCCCCcCccccccEEeecccc-cccc-Cchhh-----ccccceecccccc-ccCCCchhhhccccc
Q 006884 95 ALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNY-FSGV-LPAFR-----SLQLNALDLSFNA-FTGNIPPGFQNLTRL 166 (627)
Q Consensus 95 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~-l~~~-~~~~~-----~~~L~~L~ls~N~-l~~~~p~~~~~l~~L 166 (627)
+|+.|||+++.|+..--..+..+++|++|+|+++. ++.. +..+. ..+|++|+|+++. ||..-=..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 35555555555543222234455666666666553 3321 01111 1246666666653 553212245566677
Q ss_pred ccccccccc
Q 006884 167 HLLNLQNNS 175 (627)
Q Consensus 167 ~~L~l~~N~ 175 (627)
++|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 777776653
No 429
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.02 E-value=0.0065 Score=63.80 Aligned_cols=72 Identities=8% Similarity=0.113 Sum_probs=49.7
Q ss_pred cccCcCCceEEEEEEEcC--------CcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEec
Q 006884 340 EVLGKGSYGSTYKAILED--------GTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
+.|+.|....+|+....+ +..+++|+.... .....+..|..++..+..+.-..++++.+. + .+|+||
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~e~ 153 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLEEY 153 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEECC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEEEE
Confidence 457788889999998753 478999987432 222556678888888865544456666543 2 389999
Q ss_pred CCCCc
Q 006884 412 MPAGS 416 (627)
Q Consensus 412 ~~~gs 416 (627)
++|-+
T Consensus 154 l~G~~ 158 (429)
T 1nw1_A 154 IPSRP 158 (429)
T ss_dssp CCEEE
T ss_pred eCCcc
Confidence 98643
No 430
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.02 E-value=0.00048 Score=59.34 Aligned_cols=37 Identities=24% Similarity=0.185 Sum_probs=20.4
Q ss_pred ccceeccccccccCCCchhhhcccccccccccccccc
Q 006884 141 QLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSIS 177 (627)
Q Consensus 141 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 177 (627)
+|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4555555555555333344555666666666666553
No 431
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.90 E-value=0.0021 Score=66.08 Aligned_cols=73 Identities=11% Similarity=0.085 Sum_probs=43.8
Q ss_pred cccCcCCceEEEEEEEcC---------CcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEe
Q 006884 340 EVLGKGSYGSTYKAILED---------GTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e 410 (627)
+.++.|....+|+....+ +..+++|+.........+...|.+++..+..+.-..++++.. . -++|||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~e 114 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIEE 114 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEEE
Confidence 457778888999998654 268888886543221112467788888775553334555443 2 368999
Q ss_pred cCCCCc
Q 006884 411 YMPAGS 416 (627)
Q Consensus 411 ~~~~gs 416 (627)
|++|-.
T Consensus 115 ~i~G~~ 120 (369)
T 3c5i_A 115 WLYGDP 120 (369)
T ss_dssp CCCSEE
T ss_pred EecCCc
Confidence 998754
No 432
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.70 E-value=0.014 Score=61.61 Aligned_cols=74 Identities=7% Similarity=0.069 Sum_probs=47.2
Q ss_pred cccCcCCceEEEEEEEcC-CcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEecCCCCcH
Q 006884 340 EVLGKGSYGSTYKAILED-GTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 417 (627)
+.|+.|-...+|+....+ +..+++|+........-+...|..++..+..+.-..++++.+. + .+|+||++|-+|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 567888889999998764 4788888764322211123578888888855544456666652 2 359999987443
No 433
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.61 E-value=0.0068 Score=61.48 Aligned_cols=32 Identities=25% Similarity=0.257 Sum_probs=27.8
Q ss_pred CCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006884 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 457 ~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 488 (627)
..++|+|+.+.||+++.++.+.|+||+.+...
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 45899999999999998888999999876543
No 434
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.59 E-value=0.00011 Score=67.90 Aligned_cols=86 Identities=14% Similarity=0.069 Sum_probs=44.7
Q ss_pred ccCCCCcccEEEccCC-cCCCC----CCCCcCccccccEEeeccccccccCc----hhh--ccccceeccccccccCC--
Q 006884 89 SIGKLDALKILSLRSN-YLNGT----LPSDITSISSLQYVYLQNNYFSGVLP----AFR--SLQLNALDLSFNAFTGN-- 155 (627)
Q Consensus 89 ~~~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~ls~N~l~~~~~----~~~--~~~L~~L~ls~N~l~~~-- 155 (627)
.+.+-+.|+.|+|++| .|... +-..+..-+.|+.|+|++|+|...-. ... ...|+.|+|++|.|...
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 3445566777777764 55421 12233444667777777777763211 111 12577777777776531
Q ss_pred --Cchhhhccccccccccccc
Q 006884 156 --IPPGFQNLTRLHLLNLQNN 174 (627)
Q Consensus 156 --~p~~~~~l~~L~~L~l~~N 174 (627)
+-+.+..-+.|+.|+|++|
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHHhhCCceeEEECCCC
Confidence 1122333345666666654
No 435
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.59 E-value=0.0057 Score=63.46 Aligned_cols=53 Identities=13% Similarity=0.096 Sum_probs=24.7
Q ss_pred hhhhccccccccccccccccccCCCC---CCCccceEeccCCCccccCCCcCCCCCCCc
Q 006884 158 PGFQNLTRLHLLNLQNNSISGAIPPL---NLPRLKILNFSNNNLNGSIPDSLQTFPNSS 213 (627)
Q Consensus 158 ~~~~~l~~L~~L~l~~N~l~~~~~~~---~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~ 213 (627)
..|.++++|+.+.+.++..+ ++.. ++.+|+.+.+..| ++..-...+.++..|.
T Consensus 156 ~aF~~c~~L~~i~l~~~~~~--I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~ 211 (394)
T 4fs7_A 156 EAFATCESLEYVSLPDSMET--LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLE 211 (394)
T ss_dssp TTTTTCTTCCEEECCTTCCE--ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCC
T ss_pred hhhcccCCCcEEecCCccce--eccccccCCCCceEEEcCCC-ceEeCchhhccccccc
Confidence 34556666666666544321 2221 4556666666554 3322223344444443
No 436
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.57 E-value=0.0035 Score=53.83 Aligned_cols=57 Identities=19% Similarity=0.215 Sum_probs=42.6
Q ss_pred EEEcCCCCcc-cccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccc
Q 006884 73 GIHLPGIGFT-GPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSG 132 (627)
Q Consensus 73 ~L~l~~~~l~-~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 132 (627)
.++.++++|+ ..+|.+ + -++|+.|+|++|+|+..-+..|..+++|++|+|++|.+.-
T Consensus 12 ~v~Cs~~~L~~~~vP~~-l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~C 69 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTA-F--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRC 69 (130)
T ss_dssp EEECCSSCCCTTTSCSC-C--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBC
T ss_pred EEEeCCCCCccccCCCC-C--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeec
Confidence 6788888886 456652 2 2368899999999985555567888889988888887753
No 437
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.42 E-value=0.036 Score=51.44 Aligned_cols=103 Identities=9% Similarity=0.028 Sum_probs=67.0
Q ss_pred CcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCCC
Q 006884 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTA 494 (627)
Q Consensus 415 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~~ 494 (627)
-+|.+.|... +.++++.+++.++.|.+.+|.-+-.... + ..+=+.|..|++..+|.+...+ +.+.
T Consensus 33 vSL~eIL~~~----~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~-------- 97 (229)
T 2yle_A 33 LSLEEILRLY----NQPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD-------- 97 (229)
T ss_dssp EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C-----------
T ss_pred ccHHHHHHHc----CCCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc--------
Confidence 4799999865 4689999999999999998776622110 1 1222346899999999997753 1111
Q ss_pred CCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCC
Q 006884 495 TRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAP 533 (627)
Q Consensus 495 ~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p 533 (627)
.....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 98 ~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ---------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1122467888764 3557888999999999998875444
No 438
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.26 E-value=0.0005 Score=63.44 Aligned_cols=109 Identities=8% Similarity=0.132 Sum_probs=71.7
Q ss_pred CCcEEEEEcCCC-Ccccc----cCccccCCCCcccEEEccCCcCCCCCCCCc----CccccccEEeeccccccccCch--
Q 006884 68 RSRVIGIHLPGI-GFTGP----IPANSIGKLDALKILSLRSNYLNGTLPSDI----TSISSLQYVYLQNNYFSGVLPA-- 136 (627)
Q Consensus 68 ~~~v~~L~l~~~-~l~~~----~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~----~~l~~L~~L~ls~N~l~~~~~~-- 136 (627)
...++.|+|++| ++... +-. .+..=+.|+.|+|++|.|...--..| ..-+.|++|+|++|+|+..--.
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~-aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~al 118 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIE-AACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 118 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHH-HHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHH-HHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHH
Confidence 357899999986 66531 222 56777889999999999974322233 3447899999999999854221
Q ss_pred --hh--ccccceeccccccc---cCC----Cchhhhcccccccccccccccc
Q 006884 137 --FR--SLQLNALDLSFNAF---TGN----IPPGFQNLTRLHLLNLQNNSIS 177 (627)
Q Consensus 137 --~~--~~~L~~L~ls~N~l---~~~----~p~~~~~l~~L~~L~l~~N~l~ 177 (627)
.. ...|+.|+|++|.. ... +-..+..-+.|+.|+++.|.+.
T Consensus 119 a~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 119 LRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 11 13699999987643 311 2234455567888888777653
No 439
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.16 E-value=0.0057 Score=63.48 Aligned_cols=110 Identities=13% Similarity=0.232 Sum_probs=75.3
Q ss_pred cCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhh-c-cccceeccccccccCCCchhhhc
Q 006884 85 IPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFR-S-LQLNALDLSFNAFTGNIPPGFQN 162 (627)
Q Consensus 85 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~-~-~~L~~L~ls~N~l~~~~p~~~~~ 162 (627)
+....|.+..+|+.+.+.++..+ .-...|.++++|+.+.+. +.+..+....+ . .+|+.++|..| ++..-...|.+
T Consensus 256 i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~ 332 (394)
T 4gt6_A 256 IETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAG 332 (394)
T ss_dssp ECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT
T ss_pred cccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhC
Confidence 33446888888888888766554 555677888888888886 45555555433 3 37888888765 55344567888
Q ss_pred cccccccccccccccccCCC---CCCCccceEeccCCCcc
Q 006884 163 LTRLHLLNLQNNSISGAIPP---LNLPRLKILNFSNNNLN 199 (627)
Q Consensus 163 l~~L~~L~l~~N~l~~~~~~---~~~~~L~~L~l~~N~l~ 199 (627)
|++|+.+.|..+ ++ .+.. .++.+|+.+++.+|...
T Consensus 333 C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~~~ 370 (394)
T 4gt6_A 333 CEQLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGSRSQ 370 (394)
T ss_dssp CTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSCHHH
T ss_pred CCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCceee
Confidence 888888888654 44 3433 27888888888887653
No 440
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.14 E-value=0.0081 Score=62.30 Aligned_cols=138 Identities=20% Similarity=0.116 Sum_probs=79.9
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc-cccceecc
Q 006884 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALDL 147 (627)
Q Consensus 69 ~~v~~L~l~~~~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~-~~L~~L~l 147 (627)
..++.+.+...- + .+....+.....|+.+.+..+... .....|..+..|+.+.+..+.+... .+.. .+|+.+.+
T Consensus 230 ~~l~~i~ip~~~-~-~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~~~--~F~~~~~L~~i~l 304 (394)
T 4fs7_A 230 TGVKNIIIPDSF-T-ELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVPEK--TFYGCSSLTEVKL 304 (394)
T ss_dssp CCCCEEEECTTC-C-EECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEECTT--TTTTCTTCCEEEE
T ss_pred CCCceEEECCCc-e-ecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeeccc--ccccccccccccc
Confidence 346666665432 2 344556778888888888777554 4555677777777777665543211 1222 35677776
Q ss_pred ccccccCCCchhhhccccccccccccccccccCCC-C--CCCccceEeccCCCccccCCCcCCCCCCCccc
Q 006884 148 SFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPP-L--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV 215 (627)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~ 215 (627)
.+| ++..-...|.++++|+.++|.++ ++ .++. . ++.+|+.+++..| ++..-...|.++.+|+.+
T Consensus 305 ~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i 371 (394)
T 4fs7_A 305 LDS-VKFIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKV 371 (394)
T ss_dssp CTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEE
T ss_pred ccc-cceechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEE
Confidence 554 44233446777777777777543 44 2332 2 6677777777655 543333556666666554
No 441
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=95.94 E-value=0.0019 Score=58.41 Aligned_cols=87 Identities=10% Similarity=0.136 Sum_probs=55.9
Q ss_pred CCCcCccccccEEeecccccccc-Cchhhc-cccceecccccc-ccCCCchhhhcc----cccccccccccc-cccc--C
Q 006884 111 PSDITSISSLQYVYLQNNYFSGV-LPAFRS-LQLNALDLSFNA-FTGNIPPGFQNL----TRLHLLNLQNNS-ISGA--I 180 (627)
Q Consensus 111 p~~~~~l~~L~~L~ls~N~l~~~-~~~~~~-~~L~~L~ls~N~-l~~~~p~~~~~l----~~L~~L~l~~N~-l~~~--~ 180 (627)
|.....--+|++|||+++.++.. +..+.. .+|+.|+|+++. |+..-=..+..+ ++|++|+|++|. |+.. .
T Consensus 54 P~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~ 133 (176)
T 3e4g_A 54 PTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGII 133 (176)
T ss_dssp CCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHH
T ss_pred CcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHH
Confidence 43333335799999999987643 122222 379999999985 664222334443 469999999874 6531 1
Q ss_pred CCCCCCccceEeccCCC
Q 006884 181 PPLNLPRLKILNFSNNN 197 (627)
Q Consensus 181 ~~~~~~~L~~L~l~~N~ 197 (627)
.-..+++|++|+++++.
T Consensus 134 ~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 134 ALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HGGGCTTCCEEEEESCT
T ss_pred HHhcCCCCCEEECCCCC
Confidence 11267899999999875
No 442
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=95.89 E-value=0.016 Score=59.48 Aligned_cols=125 Identities=11% Similarity=0.100 Sum_probs=83.6
Q ss_pred cccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCchhhc--cccceeccccccccCCCchhhhcccc
Q 006884 88 NSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNALDLSFNAFTGNIPPGFQNLTR 165 (627)
Q Consensus 88 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~ 165 (627)
..+....+|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++.+....+. .+|+.+.+..+ ++..-...|.++++
T Consensus 211 ~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~ 287 (379)
T 4h09_A 211 YGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSN 287 (379)
T ss_dssp TTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTT
T ss_pred cccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccc
Confidence 35677788888888765 33345567788888988888766 5544443222 36888888654 44334457888889
Q ss_pred ccccccccccccccCCCC--CCCccceEeccCCCccccCCCcCCCCCCCcccC
Q 006884 166 LHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 166 L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
|+.+.+.+|.++...... ++.+|+.+.|.+| ++..-...|.++.+|+.+.
T Consensus 288 L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ 339 (379)
T 4h09_A 288 LTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTIS 339 (379)
T ss_dssp CCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCC
T ss_pred cccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEE
Confidence 999998888877433332 7788888888655 5533345677777776554
No 443
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=95.61 E-value=0.014 Score=60.51 Aligned_cols=115 Identities=12% Similarity=0.132 Sum_probs=66.9
Q ss_pred cccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCc-hhhc-cccceeccccccccCCCchhhhccccccccccc
Q 006884 95 ALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLP-AFRS-LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQ 172 (627)
Q Consensus 95 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~-~~~~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~ 172 (627)
.+..+.+.+ .++..-...|.++.+|+.+.+.++..+ +.. .+.. ..|+.+.+. +.++..-...|.+|.+|+.++|.
T Consensus 243 ~~~~~~ip~-~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp 319 (394)
T 4gt6_A 243 EDPAFKIPN-GVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIP 319 (394)
T ss_dssp CCSEEECCT-TEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECC
T ss_pred ccceEEcCC-cceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeC
Confidence 344444432 233233456777888888888665433 222 2322 367788775 44553344578888888888886
Q ss_pred cccccccCCC-C--CCCccceEeccCCCccccCCCcCCCCCCCccc
Q 006884 173 NNSISGAIPP-L--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV 215 (627)
Q Consensus 173 ~N~l~~~~~~-~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~ 215 (627)
.| ++ .+.. . ++.+|+.+.|..+ ++..-...|.++.+|+.+
T Consensus 320 ~~-v~-~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i 362 (394)
T 4gt6_A 320 EG-IT-QILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNI 362 (394)
T ss_dssp TT-CC-EECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEE
T ss_pred Cc-cc-EehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEE
Confidence 54 44 2332 2 6788888888654 552223567777777654
No 444
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.52 E-value=0.073 Score=55.40 Aligned_cols=74 Identities=5% Similarity=0.082 Sum_probs=47.8
Q ss_pred cccCcCCceEEEEEEEcC--------CcEEEEEEecccccCHHHHHHHHHHHHHhccCCceeceeeEEeeCCceeEEEec
Q 006884 340 EVLGKGSYGSTYKAILED--------GTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 411 (627)
+.+..|-...+|+....+ ++.+++|+........-+..+|.+++..+..+.-..++++.+ . -++|+||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~ef 151 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIEEF 151 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEEC
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEEE
Confidence 456667778899988753 578999886443222223467788888775554445555433 2 3689999
Q ss_pred CCCCcH
Q 006884 412 MPAGSL 417 (627)
Q Consensus 412 ~~~gsL 417 (627)
++|..|
T Consensus 152 I~G~~l 157 (424)
T 3mes_A 152 IDGEPL 157 (424)
T ss_dssp CCSEEC
T ss_pred eCCccC
Confidence 998653
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.46 E-value=0.12 Score=53.39 Aligned_cols=143 Identities=13% Similarity=0.161 Sum_probs=81.4
Q ss_pred cccCcCCceEEEEEEEcC--------CcEEEEEEecccccC------------H-------HHHHHHHHHHHHhccCCce
Q 006884 340 EVLGKGSYGSTYKAILED--------GTTVVVKRLREVAAT------------K-------REFEQQMEVVGTIGKHSNV 392 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~------------~-------~~~~~e~~~l~~l~~h~ni 392 (627)
+.|..|-...+|+....+ +..|++++.-..... . +....|.+++..+..+--.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 446567778899988653 367888876432110 1 1122478888888666666
Q ss_pred eceeeEEeeCCceeEEEecCCCCcHHH-----------------HhhhcCCCCCCCCC--HHHHHHHHHHHH--------
Q 006884 393 VPVRAYYYSKDEKLVVYSYMPAGSLFM-----------------LLHRNRSDGGTALD--WNSRMKIALGTA-------- 445 (627)
Q Consensus 393 v~~~~~~~~~~~~~lv~e~~~~gsL~~-----------------~l~~~~~~~~~~l~--~~~~~~i~~~ia-------- 445 (627)
.++++++.. . +|+||++|-+|.. -+|........... |....++..++.
T Consensus 138 Pkl~~~~~~--G--~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ--G--RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT--E--EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC--C--eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 677776532 2 8999998744311 11211111112223 223333332221
Q ss_pred --------------HHH----HHHHhcC-CCCeeecCCCCCCeEecCC------CCeEEeeccccc
Q 006884 446 --------------RGI----AFIHSEG-GAKFTHGNIKSSNVLLTQD------LNGCISDVGLAH 486 (627)
Q Consensus 446 --------------~~l----~~LH~~~-~~~ivH~Dlkp~NILl~~~------~~~ki~DfG~a~ 486 (627)
.-+ .+|...+ ...++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 2333332 2358999999999999887 789999998764
No 446
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=95.15 E-value=0.068 Score=54.78 Aligned_cols=82 Identities=13% Similarity=0.126 Sum_probs=32.7
Q ss_pred ccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccccccccCch-hhc-cccceeccccccccCCCchhhhccccc
Q 006884 89 SIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPA-FRS-LQLNALDLSFNAFTGNIPPGFQNLTRL 166 (627)
Q Consensus 89 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~-~~~-~~L~~L~ls~N~l~~~~p~~~~~l~~L 166 (627)
.|.+...|+.+.+..+ ++..-...|.++.+|+.+.+..+ +..+... +.. .+|+.+++.+|.++..-+..|.+|.+|
T Consensus 235 ~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L 312 (379)
T 4h09_A 235 AFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKL 312 (379)
T ss_dssp TTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTC
T ss_pred cccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCC
Confidence 3444444444444433 32222334444444444444332 2222221 111 244444444444442223344444444
Q ss_pred cccccc
Q 006884 167 HLLNLQ 172 (627)
Q Consensus 167 ~~L~l~ 172 (627)
+.+.|.
T Consensus 313 ~~i~lp 318 (379)
T 4h09_A 313 SSVTLP 318 (379)
T ss_dssp CEEECC
T ss_pred CEEEcC
Confidence 444443
No 447
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=94.12 E-value=0.034 Score=36.94 Aligned_cols=31 Identities=19% Similarity=0.058 Sum_probs=17.1
Q ss_pred cceeeeehhhHHHHHHHHHHHHhhhhccccc
Q 006884 259 GSIIAIAVGGCAVLFLLLALFFLCCLKKLDR 289 (627)
Q Consensus 259 ~~ii~~~~~~~~~~~~l~~~~~~~~~rr~~~ 289 (627)
..|.+.++++++++++++++++++.+||+++
T Consensus 11 ~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 11 PSIATGMVGALLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp SSSTHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred ceEEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence 3455566666666655555555555554443
No 448
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=93.60 E-value=0.036 Score=36.71 Aligned_cols=31 Identities=23% Similarity=0.232 Sum_probs=17.1
Q ss_pred cceeeeehhhHHHHHHHHHHHHhhhhccccc
Q 006884 259 GSIIAIAVGGCAVLFLLLALFFLCCLKKLDR 289 (627)
Q Consensus 259 ~~ii~~~~~~~~~~~~l~~~~~~~~~rr~~~ 289 (627)
..+.+.+++++++++++++.++++.+||+++
T Consensus 10 ~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 10 PLIAAGVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred ceEEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 3455666666666655555555555544443
No 449
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=91.71 E-value=0.06 Score=34.60 Aligned_cols=30 Identities=27% Similarity=0.380 Sum_probs=18.1
Q ss_pred cCccceeeeehhhHHHHHHHHHHHHhhhhc
Q 006884 256 LNSGSIIAIAVGGCAVLFLLLALFFLCCLK 285 (627)
Q Consensus 256 ~~~~~ii~~~~~~~~~~~~l~~~~~~~~~r 285 (627)
.+.+.+.+++++.++.+++++++.+++++|
T Consensus 8 ls~GaIAGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 8 LTGGEIVAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCceeeeehHHHHHHHHHHHHHHHHeec
Confidence 445666666677666666666555555544
No 450
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.10 E-value=0.72 Score=47.53 Aligned_cols=29 Identities=21% Similarity=0.398 Sum_probs=24.5
Q ss_pred eeecCCCCCCeEe------cCCCCeEEeecccccc
Q 006884 459 FTHGNIKSSNVLL------TQDLNGCISDVGLAHL 487 (627)
Q Consensus 459 ivH~Dlkp~NILl------~~~~~~ki~DfG~a~~ 487 (627)
++|+|+.+.|||+ +++..+.++||-.|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4567799999988754
No 451
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=87.66 E-value=1.2 Score=41.21 Aligned_cols=116 Identities=11% Similarity=0.120 Sum_probs=78.1
Q ss_pred cCCceeceeeEEeeCCceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCC
Q 006884 388 KHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSS 467 (627)
Q Consensus 388 ~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~ 467 (627)
.||+.+.. ..-.+.+...+.|+.-+.+.=...++ ..+...+++++.+++....++++ -+|--+.|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik--------~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~ 108 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK--------SFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPD 108 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG--------GSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH--------hcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecc
Confidence 68888876 34455555555555543332222232 36788999999999887766554 468889999
Q ss_pred CeEecCCCCeEEeecccccccCCCCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 006884 468 NVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535 (627)
Q Consensus 468 NILl~~~~~~ki~DfG~a~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~ 535 (627)
||+++.++.+++.-.|+...+ +|. ..++..=.-.+=+++..+++++..|+
T Consensus 109 NL~f~~~~~p~i~~RGik~~l-------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 109 ELFFTRDGLPIAKTRGLQNVV-------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp GEEECTTSCEEESCCEETTTB-------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred eEEEcCCCCEEEEEccCccCC-------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999999887764433 221 11222223466778888999988875
No 452
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=86.15 E-value=0.29 Score=32.35 Aligned_cols=25 Identities=24% Similarity=0.380 Sum_probs=9.9
Q ss_pred eeeeehhhHHHHHHHHHHHHhhhhcc
Q 006884 261 IIAIAVGGCAVLFLLLALFFLCCLKK 286 (627)
Q Consensus 261 ii~~~~~~~~~~~~l~~~~~~~~~rr 286 (627)
++++++| +++++++++.++++.+||
T Consensus 14 Ia~~vVG-vll~vi~~l~~~~~~RRR 38 (44)
T 2jwa_A 14 IISAVVG-ILLVVVLGVVFGILIKRR 38 (44)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHH-HHHHHHHHHHHHhheehh
Confidence 4444445 333333333333333333
No 453
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=84.06 E-value=2.4 Score=39.31 Aligned_cols=115 Identities=16% Similarity=0.146 Sum_probs=76.5
Q ss_pred cCCceeceeeEEeeCCceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHH-HHHhcCCCCeeecCCCC
Q 006884 388 KHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA-FIHSEGGAKFTHGNIKS 466 (627)
Q Consensus 388 ~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~-~LH~~~~~~ivH~Dlkp 466 (627)
.||++ -...-.+.+...+.|+.-+++.=...++ ..+...+++++.+++.... ++++ -+|--+.|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~--------~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P 112 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR--------KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCP 112 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH--------TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH--------hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeC
Confidence 68887 3333456667767777654544444443 2678889999988877655 4443 57888999
Q ss_pred CCeEecCCCCeEEeecccccccCCCCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 006884 467 SNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535 (627)
Q Consensus 467 ~NILl~~~~~~ki~DfG~a~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~pf~ 535 (627)
+||+++.++.++|.-.|+-..+ +|.-. ++.-=.-.+=+++..++.++..|+
T Consensus 113 ~NL~f~~~~~p~i~hRGi~~~l-------------pP~e~-----~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGVKESL-------------PPDEW-----DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GGEEECTTCCEEESCCEETTTB-------------SSCSC-----CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred ceEEEeCCCcEEEEEcCCcccC-------------CCCCC-----CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999999988874333 33211 111223366677888888887764
No 454
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=65.09 E-value=0.82 Score=48.10 Aligned_cols=57 Identities=7% Similarity=0.064 Sum_probs=16.3
Q ss_pred cccCcCCceEEEEEEEcC-CcEEEE------EEeccccc---CHHHHHHHHHHHHHhccCCceeceeeEEe
Q 006884 340 EVLGKGSYGSTYKAILED-GTTVVV------KRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYY 400 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~ 400 (627)
+.|| ||.||+|.+.. ..+||| |..+.... ....+.+|..++..+ .|+|+++..++..
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~-~H~niv~~h~f~~ 214 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENE-QIPKYEKIHNFKV 214 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC------------------------------------CBCCCEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccc-cccccCCCcceEE
Confidence 4566 99999999864 367888 76654322 234577788888777 8999999877754
No 455
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=64.51 E-value=6.1 Score=28.29 Aligned_cols=21 Identities=33% Similarity=0.578 Sum_probs=13.9
Q ss_pred eehhhHHHHHHHHHHHHhhhh
Q 006884 264 IAVGGCAVLFLLLALFFLCCL 284 (627)
Q Consensus 264 ~~~~~~~~~~~l~~~~~~~~~ 284 (627)
+++|+++.+++++.+.++|+.
T Consensus 12 ivlGg~~~lll~~glcI~ccv 32 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIFFSV 32 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHhh
Confidence 567777777777766666443
No 456
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=53.79 E-value=1.1e+02 Score=32.83 Aligned_cols=47 Identities=21% Similarity=0.121 Sum_probs=33.3
Q ss_pred CHHHHHHHHHHHHH--HHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccc
Q 006884 433 DWNSRMKIALGTAR--GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH 486 (627)
Q Consensus 433 ~~~~~~~i~~~ia~--~l~~LH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 486 (627)
.|..+..++..+|. .+.|+=.- +|=.++|||++.+|++.=+|||..-
T Consensus 453 ~~~a~~nF~~S~A~ySvv~YILGi-------gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 453 SAEVMDTYVKSCAGYCVITYILGV-------GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTC-------CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred cHHHHHHHHHHHHHHhHhheeeec-------cCCCCcceeEcCCCCEeeeehHHhh
Confidence 35555555555443 45666433 5778999999999999999999863
No 457
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=33.84 E-value=56 Score=25.74 Aligned_cols=44 Identities=7% Similarity=0.148 Sum_probs=33.2
Q ss_pred ccCccccCCCCcccEEEccCCcCCCCCCCCcCccccccEEeeccc
Q 006884 84 PIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNN 128 (627)
Q Consensus 84 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 128 (627)
.|....|.+.++|+.+.|..+ ++.+-...|.++.+|+.+.+...
T Consensus 10 ~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 10 GMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp SSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred EecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 455567888999999988876 44355668888999998888664
No 458
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=30.64 E-value=17 Score=22.32 Aligned_cols=24 Identities=21% Similarity=0.423 Sum_probs=12.4
Q ss_pred cceeeeehhhHHHHHHHHHHHHhh
Q 006884 259 GSIIAIAVGGCAVLFLLLALFFLC 282 (627)
Q Consensus 259 ~~ii~~~~~~~~~~~~l~~~~~~~ 282 (627)
+.+.+++++.+++.+++++.++++
T Consensus 7 gaIaGIVvgdi~~t~~i~~~vy~~ 30 (33)
T 2l34_A 7 GVLAGIVVGDLVLTVLIALAVYFL 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEeEeHHHHHHHHHHHHHHhhe
Confidence 445555556555555444444443
No 459
>2llm_A Amyloid beta A4 protein; alzheimer'S disease, protein fibril; NMR {Homo sapiens} PDB: 2loh_A
Probab=33.42 E-value=13 Score=24.14 Aligned_cols=26 Identities=27% Similarity=0.594 Sum_probs=14.6
Q ss_pred CccceeeeehhhHHHHHHHHHHHHhh
Q 006884 257 NSGSIIAIAVGGCAVLFLLLALFFLC 282 (627)
Q Consensus 257 ~~~~ii~~~~~~~~~~~~l~~~~~~~ 282 (627)
+.+++++..++++++..++++.+++.
T Consensus 15 srga~iGL~v~gVai~~vIVvsl~ml 40 (43)
T 2llm_A 15 NKGAIIGLMVGGVVIATVIVITLVML 40 (43)
Confidence 34556666666666655555444443
No 460
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=21.68 E-value=4.6e+02 Score=25.65 Aligned_cols=79 Identities=13% Similarity=0.125 Sum_probs=42.1
Q ss_pred ceeEEEecCCCCcHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCeee-cCCCCCCeEecCCCC-eEEe
Q 006884 404 EKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG-AKFTH-GNIKSSNVLLTQDLN-GCIS 480 (627)
Q Consensus 404 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~-~~ivH-~Dlkp~NILl~~~~~-~ki~ 480 (627)
..+++|+|.+|..|.+.-.... ...+...... ..+-+-+++++..... .+.+. .--.+.|||++.++. +.++
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~~---~~~f~~~~~k--~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~I 230 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTSA---PEVLTKSTMQ--QLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPI 230 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSSH---HHHSCHHHHH--HHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEEC
T ss_pred cceehhhhcCCCccccchhhhh---hhhcCHHHHH--hhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEE
Confidence 4569999999766543211100 0012212211 1122345666665542 23332 235789999987554 7888
Q ss_pred ecccccc
Q 006884 481 DVGLAHL 487 (627)
Q Consensus 481 DfG~a~~ 487 (627)
|-+.+..
T Consensus 231 Dhn~af~ 237 (342)
T 1cja_A 231 DSKIIPL 237 (342)
T ss_dssp SCCCCCC
T ss_pred cCCcccc
Confidence 9888754
No 461
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=21.04 E-value=59 Score=22.41 Aligned_cols=17 Identities=35% Similarity=0.548 Sum_probs=6.7
Q ss_pred ceeeeehhhHHHHHHHH
Q 006884 260 SIIAIAVGGCAVLFLLL 276 (627)
Q Consensus 260 ~ii~~~~~~~~~~~~l~ 276 (627)
.++++++++..++++++
T Consensus 11 iIi~svl~GLLLL~Lii 27 (54)
T 2l8s_A 11 VILLSAFAGLLLLMLLI 27 (54)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33333444444333333
No 462
>2lp1_A C99; alzheimer'S D membrane protein, transmembrane Pro; NMR {Homo sapiens}
Probab=23.95 E-value=24 Score=28.31 Aligned_cols=25 Identities=24% Similarity=0.529 Sum_probs=12.6
Q ss_pred cceeeeehhhHHHHHHHHHHHHhhh
Q 006884 259 GSIIAIAVGGCAVLFLLLALFFLCC 283 (627)
Q Consensus 259 ~~ii~~~~~~~~~~~~l~~~~~~~~ 283 (627)
+.+++..+++++++.++++.+++.+
T Consensus 30 ~a~igL~v~~vai~~viVv~l~v~r 54 (122)
T 2lp1_A 30 GAIIGLMVGGVVIATVIVITLVMLK 54 (122)
Confidence 3456666666555544444444433
Done!