BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006885
(627 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C671|P4K2B_ARATH Probable phosphatidylinositol 4-kinase type 2-beta At1g26270
OS=Arabidopsis thaliana GN=At1g26270 PE=1 SV=1
Length = 630
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/632 (63%), Positives = 476/632 (75%), Gaps = 19/632 (3%)
Query: 1 MAVAAFRGGINGEHGGSKRMESQHS-GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQL 59
MAVA + +NGE ++ + G+RRVFVQTE G VLG+ELDRSDNAHTVKRKLQ+
Sbjct: 13 MAVALVKSPLNGEFREFNKVGMKTPVGRRRVFVQTETGCVLGLELDRSDNAHTVKRKLQV 72
Query: 60 ALDVPTEERSLIYGDTVLKNDLSYVRHDSPLLLTRNCMHRSSSTPCLSPTGKDLQER-DL 118
AL+ P EE SL +GD VLKNDL+ VR DSPLLLTRN HRSSSTPCLSP DLQ+R D
Sbjct: 73 ALNFPIEESSLTFGDLVLKNDLTAVRSDSPLLLTRNNFHRSSSTPCLSPMRADLQQRRDE 132
Query: 119 SGPIEILGYSNHFSTAKQLVKEIVKAMKKGIDPIPVHSGLGGAYYFRNCAGENVAIVKPT 178
S PIEILG S FS +Q+ K+I KA+KKGIDP+ V+SGLGGAYYF+N GE+VAIVKPT
Sbjct: 133 SSPIEILGNSVSFSFVRQMAKDITKAVKKGIDPVAVNSGLGGAYYFKNSRGESVAIVKPT 192
Query: 179 DEEPYAPNNPKGFVGSALGQPGLKRSVRVGETGFREVAAYLLDYDHFANVPCTALVKVTH 238
DEEPYAPNNPKGFVG ALGQPGLKRSVRVGETG+REVAAYLLD +HFANVP TALVK+TH
Sbjct: 193 DEEPYAPNNPKGFVGKALGQPGLKRSVRVGETGYREVAAYLLDKEHFANVPPTALVKITH 252
Query: 239 EIFNINNGVNGNKIRKRKQVSKIASLQQFIPHDFDASDHGTSSFPVAAVHRIGILDIRIL 298
IFN+N+GV +K ++ VSKIASLQQFIPHD+DAS+HGTS+FPV+AVHRIGILDIRIL
Sbjct: 253 SIFNVNDGVKASKPMEKMLVSKIASLQQFIPHDYDASEHGTSNFPVSAVHRIGILDIRIL 312
Query: 299 NTDRHAGNLLVKKFEGTGSFGQVELVPIDHGLCLPENLEDPYFEWIHWAQASIPFSEDEL 358
NTDRH+GNLLVKK +G G FGQVELVPIDHGLCLPE LEDPYFEWIHW QASIPFSEDEL
Sbjct: 313 NTDRHSGNLLVKKLDGDGMFGQVELVPIDHGLCLPETLEDPYFEWIHWPQASIPFSEDEL 372
Query: 359 EYINQLDPFGDSGMLRLELPMIREACLRVLVICTIFLKEAAAFGLCLADIGEMMSREFRG 418
+YI LDP GD MLR ELPM+REA LRVLV+CTIFLKEAAA GLCLA+IGEMM+RE R
Sbjct: 373 KYIANLDPLGDCEMLRRELPMVREASLRVLVLCTIFLKEAAANGLCLAEIGEMMTREVRP 432
Query: 419 HAEAPSELEFICIEARRLLEESKPLFDHVKAGDNEEFQFEIDCEEREFDLTLNMEEKLSS 478
E PSE+E +C+EA L+ E G++ EFQF+IDCEE + +KL+
Sbjct: 433 GDEEPSEIEVVCLEAMSLIGEKDAESPRSDLGNDIEFQFDIDCEE-----VTDCTKKLA- 486
Query: 479 KCLSSGSKGVNGQNSLYRLEESVEEEGENEGNVTPLCLEDSAPPVWHMGPSFSKLSVSLK 538
L G N + L ++EE+ E+ E E D A P+ KLS+SLK
Sbjct: 487 --LPLGLTFGNARGQLSKVEETTEDGEEEEEEDREEEENDRAD--LEKMPTI-KLSMSLK 541
Query: 539 NITIGEKS---WRHEGTMQKNGYLAGTSSGNMSVHEHLPASTSFVKLADMNEEEWAQYLE 595
+ +GEKS +H G ++ Y SS + S E +P+STSFVKL+DM+EEEW +LE
Sbjct: 542 STLLGEKSQKYQKHPGARVESAY---ASSAHRSADEQIPSSTSFVKLSDMSEEEWTIFLE 598
Query: 596 KFQKLLYPAFTNHKSVSVGQRQKQRLGASCQF 627
K+Q+LLYPA KS+++GQ+Q+QRLG SCQF
Sbjct: 599 KYQELLYPAIEKRKSITLGQKQRQRLGTSCQF 630
>sp|Q5ZIK0|P4K2B_CHICK Phosphatidylinositol 4-kinase type 2-beta OS=Gallus gallus
GN=PI4K2B PE=2 SV=1
Length = 479
Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 109/277 (39%), Gaps = 53/277 (19%)
Query: 136 QLVKEIVKAMKKGIDPIPVHSGLGGAYYFRNCAGENVAIVKPTDEEPYAPNNPKG--FVG 193
+++ + ++ G+ P + G G+Y+ ++C G+ + + KP EEPY NPK +
Sbjct: 106 EIITRAEQVIECGVLPERISQGSSGSYFVKDCKGKTIGVFKPKSEEPYGHLNPKWTKYFH 165
Query: 194 SALGQPGLKRSVRVGETGF-REVAAYLLDYD-HFANVPCTALVKVTHEIFNINNGVNGNK 251
R V G+ E AYL+D VP T +V + E FN + ++ K
Sbjct: 166 KICCPCCFGRGCLVPNQGYLSEAGAYLVDDKLGLGVVPKTKVVWLVSETFNY-SAIDRAK 224
Query: 252 IRKRKQV-----------------SKIASLQQFIPHDFDASDHGTSSFPV---------- 284
R +K K+ S Q F+ + +D+ F
Sbjct: 225 SRGKKYALEKVPKVAKKFNRIGLPPKVGSFQLFV-EGYKEADYWLRKFETDPLPENTRKE 283
Query: 285 --AAVHRIGILDIRILNTDRHAGNLLVKKFEGTGSF--------------GQVELVPIDH 328
+ R+ ILD I NTDR N LV+ + +++ ID+
Sbjct: 284 FQSQFERLVILDYVIRNTDRGNDNWLVRYEKQDDGLNLSDKDIQWTVTEESTIKIAAIDN 343
Query: 329 GLCLPENLEDPY----FEWIHWAQASIPFSEDELEYI 361
GL P D + F W +QA +PFS++ + +
Sbjct: 344 GLAFPFKHPDEWRAYPFHWAWLSQAQVPFSQETRDLV 380
>sp|Q8TCG2|P4K2B_HUMAN Phosphatidylinositol 4-kinase type 2-beta OS=Homo sapiens GN=PI4K2B
PE=1 SV=1
Length = 481
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 113/279 (40%), Gaps = 59/279 (21%)
Query: 143 KAMKKGIDPIPVHSGLGGAYYFRNCAGENVAIVKPTDEEPYAPNNPKG--FVGSALGQPG 200
+A++ GI P + G G+Y+ ++ + + + KP EEPY NPK +V
Sbjct: 115 QAIEVGIFPERISQGSSGSYFVKDPKRKIIGVFKPKSEEPYGQLNPKWTKYVHKVCCPCC 174
Query: 201 LKRSVRVGETGF-REVAAYLLDYD-HFANVPCTALVKVTHEIFNINNGVNGNKIRKRKQV 258
R + G+ E AYL+D H + VP T +V + E FN N ++ K R +K
Sbjct: 175 FGRGCLIPNQGYLSEAGAYLVDNKLHLSIVPKTKVVWLVSETFNY-NAIDRAKSRGKKYA 233
Query: 259 -----------------SKIASLQQFIPHDFDASDHGTSSFPV------------AAVHR 289
KI S Q F+ + +++ F + R
Sbjct: 234 LEKVPKVGRKFHRIGLPPKIGSFQLFV-EGYKEAEYWLRKFEADPLPENIRKQFQSQFER 292
Query: 290 IGILDIRILNTDRHAGNLLVK---------------KFEGTGSFGQVELVPIDHGLCLPE 334
+ ILD I NTDR N LV+ K+ F +++ ID+GL P
Sbjct: 293 LVILDYIIRNTDRGNDNWLVRYEKQKCEKEIDHKESKWIDDEEF-LIKIAAIDNGLAFPF 351
Query: 335 NLEDPY----FEWIHWAQASIPFSED----ELEYINQLD 365
D + F W QA +PFSE+ L YI+ ++
Sbjct: 352 KHPDEWRAYPFHWAWLPQAKVPFSEEIRNLILPYISDMN 390
>sp|Q5XIL2|P4K2B_RAT Phosphatidylinositol 4-kinase type 2-beta OS=Rattus norvegicus
GN=Pi4k2b PE=2 SV=1
Length = 477
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 108/276 (39%), Gaps = 56/276 (20%)
Query: 143 KAMKKGIDPIPVHSGLGGAYYFRNCAGENVAIVKPTDEEPYAPNNPKG--FVGSALGQPG 200
+A++ G+ P + G G+Y+ ++ + + KP EEPY NPK +V
Sbjct: 111 QAIEIGVFPERISQGSSGSYFVKDSKRTIIGVFKPKSEEPYGQLNPKWTKYVHKVCCPCC 170
Query: 201 LKRSVRVGETGF-REVAAYLLDYD-HFANVPCTALVKVTHEIFNINNGVNGNKIRKRKQV 258
R + G+ E AYL+D VP T +V + E FN + ++ K R +K
Sbjct: 171 FGRGCLLPNQGYLSEAGAYLVDTKLQLGIVPKTKVVWLVSETFNY-SAIDRAKSRGKKYA 229
Query: 259 -----------------SKIASLQQFIPHDFDASDHGTSSFPV------------AAVHR 289
KI S Q F+ D+ +++ F + R
Sbjct: 230 LEKVPKVGRKFHRIGLPPKIGSFQLFV-KDYKEAEYWLRRFEAEPLPENIRKQFQSQFER 288
Query: 290 IGILDIRILNTDRHAGNLLV--------KKFEGTGSFG------QVELVPIDHGLCLPEN 335
+ ILD I NTDR N LV KK E S + + ID+GL P
Sbjct: 289 LVILDYIIRNTDRGNDNWLVKYDEMKYAKKIESEESNWIDDKQLLIRIAAIDNGLAFPFK 348
Query: 336 LEDPY----FEWIHWAQASIPFSEDELEYINQLDPF 367
D + F W QA +PFSE E N + PF
Sbjct: 349 HPDEWRAYPFHWAWLPQAKVPFSE---ETRNLILPF 381
>sp|Q8CBQ5|P4K2B_MOUSE Phosphatidylinositol 4-kinase type 2-beta OS=Mus musculus GN=Pi4k2b
PE=2 SV=1
Length = 469
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 115/284 (40%), Gaps = 57/284 (20%)
Query: 137 LVKEIVKAMKKGIDPIPVHSGLGGAYYFRNCAGENVAIVKPTDEEPYAPNNPKG--FVGS 194
+V + +A++ G+ P + G G+Y+ ++ + + KP EEPY NPK +V
Sbjct: 97 IVLKAEQAIEIGVFPERISQGSSGSYFVKDSKRNIIGVFKPKSEEPYGQLNPKWTKYVHK 156
Query: 195 ALGQPGLKRSVRVGETGF-REVAAYLLDYD-HFANVPCTALVKVTHEIFNINNGVNGNKI 252
R + G+ E AYL+D + VP T +V + E FN + ++ K
Sbjct: 157 VCCPCCFGRGCLLPNQGYLSEAGAYLVDVKLNLGIVPKTKVVWLVSETFNY-SAIDRAKS 215
Query: 253 RKRKQV-----------------SKIASLQQFIPHDFDASDHGTSSFPV----------- 284
R +K K+ S Q F+ D+ +++ F
Sbjct: 216 RGKKYALEKVPKVGRKFHRIGLPPKVGSFQLFV-KDYKEAEYWLRRFEAEPLPENIRKQF 274
Query: 285 -AAVHRIGILDIRILNTDRHAGNLLV--------KKFEGTGSFG------QVELVPIDHG 329
+ ++ ILD I NTDR N LV KK E S +++ ID+G
Sbjct: 275 QSQFEKLVILDYIIRNTDRGNDNWLVKYDEMKYAKKIESEESNWIDNKQLLIKIAAIDNG 334
Query: 330 LCLPENLEDPY----FEWIHWAQASIPFSEDE----LEYINQLD 365
L P D + F W QA +PFSE+ L YI+ ++
Sbjct: 335 LAFPFKHPDEWRAYPFHWAWLPQAKVPFSEETRNLILPYISDMN 378
>sp|Q505I0|P4K2A_XENTR Phosphatidylinositol 4-kinase type 2-alpha OS=Xenopus tropicalis
GN=pi4k2a PE=2 SV=2
Length = 471
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 144/368 (39%), Gaps = 75/368 (20%)
Query: 136 QLVKEIVKAMKKGIDPIPVHSGLGGAYYFRNCAGENVAIVKPTDEEPYAPNNPKG--FVG 193
++VK+ KA+ + I P + G G+Y+ +N GE +A+ KP +EEPY NPK ++
Sbjct: 105 EVVKKAEKAIVRDILPERISQGSSGSYFVKNEQGEIIAVFKPKNEEPYGQLNPKWTKWLQ 164
Query: 194 SALGQPGLKRSVRVGETGF-REVAAYLLDYDHFAN-VPCTALVKVTHEIFNINNGVNGNK 251
R V G+ E A L+D N VP T +V + E FN + ++ K
Sbjct: 165 KLCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRTKVVFLASETFNYS-AIDRVK 223
Query: 252 IRKRKQV-----------------SKIASLQQFIPHDFDASDHGTSSFPVAAV------- 287
R ++ K+ S Q F+ + +D+ F +
Sbjct: 224 SRGKRLALEKVPKVGQRFNRIGLPPKVGSFQLFV-KGYKDADYWLRRFEADPLPENTNRQ 282
Query: 288 -----HRIGILDIRILNTDRHAGNLLVKKFEGTGSFGQ-----------VELVPIDHGLC 331
R+ +LD I NTDR N L+K S +++ ID+GL
Sbjct: 283 LQLQFERLVVLDYIIRNTDRGNDNWLIKYDCPMDSASARDDWVMVKEPVIKIAAIDNGLA 342
Query: 332 LPENLEDPY----FEWIHWAQASIPFS--------------------EDELEYINQLDPF 367
P D + F W QA I FS E++L + + DP
Sbjct: 343 FPLKHPDSWRAYPFYWAWLPQAKIQFSQEIKDLILPKISDPNFVKDLEEDLYELFKRDPG 402
Query: 368 GDSGMLRLELPMIREACLRVLVICTIFLKEAAAFGLCLADIGEMMSREFRGHAEAPSELE 427
D G R ++ ++R L + T LK+ + L L ++ R H ++ SE
Sbjct: 403 FDRGQFRKQIAVMRGQILNL----TQALKDGKS-PLQLVQTPPVIVETARSHQKSTSESY 457
Query: 428 FICIEARR 435
++R+
Sbjct: 458 TQSFQSRK 465
>sp|Q49GP5|P4K2B_DANRE Phosphatidylinositol 4-kinase type 2-beta OS=Danio rerio GN=pi4k2b
PE=2 SV=1
Length = 501
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 120/297 (40%), Gaps = 53/297 (17%)
Query: 117 DLSGPIEILGYSNHFSTAKQ---LVKEIVKAMKKGIDPIPVHSGLGGAYYFRNCAGENVA 173
+L+ P G NHF + +++ +A++ G+ P + G G+Y+ ++ G+ +
Sbjct: 107 NLASPGNSSGEFNHFPEDPEFGEIIQRAEQAIENGVFPERISQGSSGSYFVKDPKGKIIG 166
Query: 174 IVKPTDEEPYAPNNPKG--FVGSALGQPGLKRSVRVGETGF-REVAAYLLDYD-HFANVP 229
+ KP EEPY NPK + R + G+ E AA L+D VP
Sbjct: 167 VFKPKSEEPYGHLNPKWTKYFHKVCCPCCFGRGCLIPNQGYLSEAAASLVDQKLGLWIVP 226
Query: 230 CTALVKVTHEIFNINNGVNGNKIRKRKQV-----------------SKIASLQQFIP--H 270
T +V + E F+ N ++ K R +K K+ S Q F+ H
Sbjct: 227 KTKVVHLASETFHY-NAIDRAKSRGKKYALEKVPKVGRRFHRVGLPPKVGSFQLFVEGYH 285
Query: 271 DFDASDHGTSSFPV---------AAVHRIGILDIRILNTDRHAGNLLVK-KFEGTGSFGQ 320
+ D + P+ + R+ +LD I NTDR N L+K + G G +
Sbjct: 286 EADFWLRKFEAEPLPENMRKQLQSQFERLVVLDYVIRNTDRGNDNWLIKYEKPGDGELTE 345
Query: 321 ------------VELVPIDHGLCLPENLEDPY----FEWIHWAQASIPFSEDELEYI 361
+++ ID+GL P D + F W QA + FS++ + +
Sbjct: 346 KESEWTDPKDSAIKIAAIDNGLAFPFKHPDEWRAYPFHWAWLPQAKVAFSQETRDLV 402
>sp|Q6PE18|P4K2A_DANRE Phosphatidylinositol 4-kinase type 2-alpha OS=Danio rerio GN=pi4k2a
PE=2 SV=1
Length = 447
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 51/271 (18%)
Query: 135 KQLVKEIVKAMKKGIDPIPVHSGLGGAYYFRNCAGENVAIVKPTDEEPYAPNNPKG--FV 192
++++++ +A+++GI P ++ G G+Y+ ++ AG+ + + KP +EEPY NPK ++
Sbjct: 79 REIIRKAERAIEEGIYPERIYQGSSGSYFVKDSAGKIIGVFKPKNEEPYGQLNPKWTKWL 138
Query: 193 GSALGQPGLKRSVRVGETGF-REVAAYLLDYDHFAN-VPCTALVKVTHEIFNINNGVNGN 250
R V G+ E A L+D N VP T +V + E FN + ++
Sbjct: 139 QKLCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRTKVVYLASETFNY-SAIDRV 197
Query: 251 KIRKRKQV-----------------SKIASLQQFIPHDFDASDHGTSSFPVAAV------ 287
K R ++ K+ S Q F+ + +D F +
Sbjct: 198 KSRGKRLALEKVPKVGQRFHRIGLPPKVGSFQIFV-EGYKDADFWLRRFEAEPLPENTNR 256
Query: 288 ------HRIGILDIRILNTDRHAGNLLVK-KFEGTGSFGQ-----------VELVPIDHG 329
R+ +LD I NTDR N L+K + S + ++L ID+G
Sbjct: 257 QLQLQFERLVVLDYIIRNTDRGNDNWLIKYDYPMDTSSNRDSDWVLVKDPIIKLAAIDNG 316
Query: 330 LCLPENLEDPY----FEWIHWAQASIPFSED 356
L P D + F W QA + FS++
Sbjct: 317 LAFPLKHPDSWRAYPFYWAWLPQAKVVFSQE 347
>sp|Q08B31|P4K2A_XENLA Phosphatidylinositol 4-kinase type 2-alpha OS=Xenopus laevis
GN=pi4k2a PE=2 SV=1
Length = 469
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 109/269 (40%), Gaps = 50/269 (18%)
Query: 136 QLVKEIVKAMKKGIDPIPVHSGLGGAYYFRNCAGENVAIVKPTDEEPYAPNNPKG--FVG 193
++VK+ KA+ + I P + G G+Y+ ++ GE +A+ KP +EEPY NPK ++
Sbjct: 103 EVVKKAEKAIMRDILPERISQGSSGSYFVKDEQGEIIAVFKPKNEEPYGQLNPKWTKWLQ 162
Query: 194 SALGQPGLKRSVRVGETGF-REVAAYLLDYDHFAN-VPCTALVKVTHEIFNINNGVNGNK 251
R V G+ E A L+D N VP T +V + E FN + ++ K
Sbjct: 163 KLCCPCCFGRDCLVLNQGYLSEAGASLVDQKLDLNIVPRTKVVFLASETFNYS-AIDRVK 221
Query: 252 IRKRKQV-----------------SKIASLQQFIPHDFDASDHGTSSFPVAAV------- 287
R ++ K+ S Q F+ + +D+ F +
Sbjct: 222 SRGKRLALEKVPKVGQRFNRIGLPPKVGSFQIFV-KSYKDADYWLRRFEADPLPENTNRQ 280
Query: 288 -----HRIGILDIRILNTDRHAGNLLVKKFEGTGSFGQ-----------VELVPIDHGLC 331
R+ +LD I NTDR N L+K S +++ ID+GL
Sbjct: 281 LQLQFERLVVLDYIIRNTDRGNDNWLIKYDCPMDSASARDDWVMVKEPVIKIAAIDNGLA 340
Query: 332 LPENLEDPY----FEWIHWAQASIPFSED 356
P D + F W QA I FS++
Sbjct: 341 FPLKHPDSWRAYPFYWAWLPQAKIQFSQE 369
>sp|Q9BTU6|P4K2A_HUMAN Phosphatidylinositol 4-kinase type 2-alpha OS=Homo sapiens
GN=PI4K2A PE=1 SV=1
Length = 479
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 111/269 (41%), Gaps = 51/269 (18%)
Query: 137 LVKEIVKAMKKGIDPIPVHSGLGGAYYFRNCAGENVAIVKPTDEEPYAPNNPKG--FVGS 194
+V++ A+++ I P ++ G G+Y+ ++ G +A+ KP +EEPY NPK ++
Sbjct: 113 VVRQAELAIERCIFPERIYQGSSGSYFVKDPQGRIIAVFKPKNEEPYGHLNPKWTKWLQK 172
Query: 195 ALGQPGLKRSVRVGETGF-REVAAYLLDYDHFAN-VPCTALVKVTHEIFNINNGVNGNKI 252
R V G+ E A L+D N VP T +V + E FN + ++ K
Sbjct: 173 LCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRTKVVYLASETFNY-SAIDRVKS 231
Query: 253 RKRKQV-----------------SKIASLQQFIPHDFDASDHGTSSFPVAAV-------- 287
R ++ K+ S Q F+ + +D+ F +
Sbjct: 232 RGKRLALEKVPKVGQRFNRIGLPPKVGSFQLFV-EGYKDADYWLRRFEAEPLPENTNRQL 290
Query: 288 ----HRIGILDIRILNTDRHAGNLLVK---KFEGTGSFGQ---------VELVPIDHGLC 331
R+ +LD I NTDR N L+K + + S +++ ID+GL
Sbjct: 291 LLQFERLVVLDYIIRNTDRGNDNWLIKYDCPMDSSSSRDTDWVVVKEPVIKVAAIDNGLA 350
Query: 332 LPENLEDPY----FEWIHWAQASIPFSED 356
P D + F W QA +PFS++
Sbjct: 351 FPLKHPDSWRAYPFYWAWLPQAKVPFSQE 379
>sp|Q28G26|P4K2B_XENTR Phosphatidylinositol 4-kinase type 2-beta OS=Xenopus tropicalis
GN=pi4k2b PE=2 SV=1
Length = 492
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 106/274 (38%), Gaps = 57/274 (20%)
Query: 143 KAMKKGIDPIPVHSGLGGAYYFRNCAGENVAIVKPTDEEPYAPNNPKG--FVGSALGQPG 200
+A++ G+ P + G G+Y+ ++ G+ + + KP EEPY NPK +
Sbjct: 122 QAIESGVFPERISQGSSGSYFVKDPKGKIIGVFKPKSEEPYGHLNPKWTKYFHKICCPCC 181
Query: 201 LKRSVRVGETGF-REVAAYLLDYD-HFANVPCTALVKVTHEIFNINNGVNGNKIRKRKQV 258
R V G+ E AYL+D VP T +V + E FN + ++ K R +K
Sbjct: 182 FGRGCLVPNQGYLSEAGAYLVDEKLGLGVVPKTKVVWLVSETFNY-SAIDRAKSRGKKYA 240
Query: 259 -----------------SKIASLQQFIPHDFDASDHGTSSFPVAAV------------HR 289
K+ S Q F+ + +D+ F + +
Sbjct: 241 LEKVPKVGRKFHRIGLPPKVGSFQLFV-DGYKEADYWLRKFETDPLPENTRKQLQCQFEK 299
Query: 290 IGILDIRILNTDRHAGNLLVKK--------FEGTGSF----------GQVELVPIDHGLC 331
+ ILD I NTDR N L++ E F +++ ID+GL
Sbjct: 300 LVILDYVIRNTDRGNDNWLIRYDSQDDDELMEKGDDFPLKDWKEIKEPVIKIAAIDNGLA 359
Query: 332 LPENLEDPY----FEWIHWAQASIPFSEDELEYI 361
P D + F W QA +PFS++ + I
Sbjct: 360 FPFKHPDEWRAYPFHWAWLPQAKVPFSQETRDLI 393
>sp|Q6DCQ8|P4K2B_XENLA Phosphatidylinositol 4-kinase type 2-beta OS=Xenopus laevis
GN=pi4k2b PE=2 SV=1
Length = 495
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 106/274 (38%), Gaps = 57/274 (20%)
Query: 143 KAMKKGIDPIPVHSGLGGAYYFRNCAGENVAIVKPTDEEPYAPNNPK--GFVGSALGQPG 200
+A++ G+ P + G G+Y+ ++ G+ + + KP EEPY NPK +
Sbjct: 125 QAIESGVFPERISQGSSGSYFVKDPKGKIIGVFKPKSEEPYGHLNPKWTKYFHKICCPCC 184
Query: 201 LKRSVRVGETGF-REVAAYLLDYD-HFANVPCTALVKVTHEIFNINNGVNGNKIRKRKQV 258
R V G+ E AYL+D VP T V + E FN + ++ K R +K
Sbjct: 185 FGRGCLVPNQGYLSEAGAYLVDEKLGLGVVPKTKAVWLVSETFNY-SAIDRAKSRGKKYA 243
Query: 259 -----------------SKIASLQQFIPHDFDASDHGTSSFPV------------AAVHR 289
K+ S Q F+ + +D+ F + +
Sbjct: 244 LEKVPKVGKKFHRIGLPPKVGSFQLFV-DGYKEADYWLRKFETDPLPENTRKQLQSPFEK 302
Query: 290 IGILDIRILNTDRHAGNLLVKK--------FEGTGSFGQ----------VELVPIDHGLC 331
+ ILD I NTDR N L++ E SF +++ ID+GL
Sbjct: 303 LVILDYVIRNTDRGNDNWLIRYDSQDDDELSEKGDSFPLKDWKEIKEPIIKIAAIDNGLA 362
Query: 332 LPENLEDPY----FEWIHWAQASIPFSEDELEYI 361
P D + F W QA +PFS++ + I
Sbjct: 363 FPFKHPDEWRAYPFHWAWLPQAKVPFSQETRDLI 396
>sp|Q2TBE6|P4K2A_MOUSE Phosphatidylinositol 4-kinase type 2-alpha OS=Mus musculus
GN=Pi4k2a PE=1 SV=1
Length = 479
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 109/269 (40%), Gaps = 51/269 (18%)
Query: 137 LVKEIVKAMKKGIDPIPVHSGLGGAYYFRNCAGENVAIVKPTDEEPYAPNNPKG--FVGS 194
+V++ A++ I P ++ G G+Y+ ++ G VA+ KP +EEPY NPK ++
Sbjct: 113 VVRQAEVAIECSIYPERIYQGSSGSYFVKDSQGRIVAVFKPKNEEPYGHLNPKWTKWLQK 172
Query: 195 ALGQPGLKRSVRVGETGF-REVAAYLLDYDHFAN-VPCTALVKVTHEIFNINNGVNGNKI 252
R V G+ E A L+D N VP T +V + E FN + ++ K
Sbjct: 173 LCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRTKVVYLASETFNY-SAIDRVKS 231
Query: 253 RKRKQV-----------------SKIASLQQFIPHDFDASDHGTSSFPVAAV-------- 287
R ++ K+ S Q F+ + +D+ F +
Sbjct: 232 RGKRLALEKVPKVGQRFNRIGLPPKVGSFQLFV-EGYKDADYWLRRFEAEPLPENTNRQL 290
Query: 288 ----HRIGILDIRILNTDRHAGNLLVK---KFEGTGSFGQ---------VELVPIDHGLC 331
R+ +LD I NTDR N L+K + + +++ ID+GL
Sbjct: 291 LLQFERLVVLDYIIRNTDRGNDNWLIKYDCPMDNSSCRDTDWVMVREPVIKVAAIDNGLA 350
Query: 332 LPENLEDPY----FEWIHWAQASIPFSED 356
P D + F W QA +PFS++
Sbjct: 351 FPLKHPDSWRAYPFYWAWLPQAKVPFSQE 379
>sp|Q99M64|P4K2A_RAT Phosphatidylinositol 4-kinase type 2-alpha OS=Rattus norvegicus
GN=Pi4k2a PE=1 SV=1
Length = 478
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 108/269 (40%), Gaps = 51/269 (18%)
Query: 137 LVKEIVKAMKKGIDPIPVHSGLGGAYYFRNCAGENVAIVKPTDEEPYAPNNPKG--FVGS 194
+V++ A++ I P ++ G G+Y+ ++ G +A+ KP +EEPY NPK ++
Sbjct: 112 VVRQAEIAIECSIYPERIYQGSSGSYFVKDSQGRIIAVFKPKNEEPYGNLNPKWTKWLQK 171
Query: 195 ALGQPGLKRSVRVGETGF-REVAAYLLDYDHFAN-VPCTALVKVTHEIFNINNGVNGNKI 252
R V G+ E A L+D N VP T +V + E FN + ++ K
Sbjct: 172 LCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRTKVVYLASETFNYS-AIDRVKS 230
Query: 253 RKRKQV-----------------SKIASLQQFIPHDFDASDHGTSSFPVAAV-------- 287
R ++ K+ S Q F+ + +D+ F +
Sbjct: 231 RGKRLALEKVPKVGQRFNRIGLPPKVGSFQLFV-EGYKDADYWLRRFEAEPLPENTNRQL 289
Query: 288 ----HRIGILDIRILNTDRHAGNLLVKKFEGTGSFG------------QVELVPIDHGLC 331
R+ +LD I NTDR N L+K + +++ ID+GL
Sbjct: 290 LLQFERLVVLDYIIRNTDRGNDNWLIKYDYPMDNPNCRDTDWVMVREPVIKVAAIDNGLA 349
Query: 332 LPENLEDPY----FEWIHWAQASIPFSED 356
P D + F W QA +PFS++
Sbjct: 350 FPLKHPDSWRAYPFYWAWLPQAKVPFSQE 378
>sp|Q9UT42|LSB6_SCHPO Phosphatidylinositol 4-kinase lsb6 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=lsb6 PE=3 SV=2
Length = 624
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 5/138 (3%)
Query: 136 QLVKEIVKAMKKGIDPIPVHSGLGGAYYFRNCAGENVAIVKPTDEEPYAPNNPKG--FVG 193
+L+ +A+ G+ P+ + G G+Y+ +N +N+A+ KP DEEPY NPK +
Sbjct: 133 RLLDATKEAIAHGVFPVLISKGSSGSYFVKNKVQKNIAVFKPKDEEPYGKLNPKWTKWFH 192
Query: 194 SALGQPGLKRSVRVGETGF-REVAAYLLDYD-HFANVPCTALVKVTHEIFNINNGVNGNK 251
L RS + T + E AA +LD VP T++ ++ FN +
Sbjct: 193 RNLFPCFFGRSCLIPNTSYLSEAAACVLDRGLGLYLVPYTSVASISSPTFNYDYFARKAF 252
Query: 252 IRKRKQV-SKIASLQQFI 268
+ + K + K S QQF+
Sbjct: 253 LTRNKPLPEKTGSFQQFL 270
>sp|P69200|RL40_LEITA Ubiquitin-60S ribosomal protein L40 OS=Leishmania tarentolae
GN=UB-EP52 PE=3 SV=2
Length = 128
Score = 36.6 bits (83), Expect = 0.57, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 30/50 (60%)
Query: 29 RVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYGDTVLK 78
++FV+T G + +E++ SD VK K+Q +P +++ LI+ D L+
Sbjct: 2 QIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLE 51
>sp|P14794|RL40_DICDI Ubiquitin-60S ribosomal protein L40 OS=Dictyostelium discoideum
GN=ubqB PE=1 SV=2
Length = 128
Score = 35.4 bits (80), Expect = 1.2, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 31/51 (60%)
Query: 29 RVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYGDTVLKN 79
++FV+T G + +E++ SDN VK K+Q +P +++ LI+ L++
Sbjct: 2 QIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P14797|RS27A_DICDI Ubiquitin-40S ribosomal protein S27a OS=Dictyostelium discoideum
GN=ubqC PE=1 SV=2
Length = 154
Score = 35.0 bits (79), Expect = 1.6, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 31/51 (60%)
Query: 29 RVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYGDTVLKN 79
++F++T G + +E++ SDN VK K+Q +P +++ LI+ L++
Sbjct: 2 QIFIKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P49633|RL40_ACACA Ubiquitin-60S ribosomal protein L40 OS=Acanthamoeba castellanii
PE=2 SV=2
Length = 128
Score = 35.0 bits (79), Expect = 2.0, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 31/51 (60%)
Query: 29 RVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYGDTVLKN 79
++FV+T G + +E++ SD VK+K+Q +P +++ LI+ L++
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P42951|LSB6_YEAST Phosphatidylinositol 4-kinase LSB6 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=LSB6 PE=1 SV=1
Length = 607
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 272 FDASDHGTSSFPVAAVHRIGILDIRILNTDRHAGNLLVKKFEGTGSFGQVELVPIDHGLC 331
F+ ++ S F + + ++ ILD + NTDR N +VK + + + +++L ID+GL
Sbjct: 359 FEWTESSLSQFRLE-LEKLIILDYIMRNTDRGLDNWMVKLIKLSNNKWRLKLAAIDNGLS 417
Query: 332 LPENLEDPYFEW 343
P D EW
Sbjct: 418 FPWKHPD---EW 426
Score = 32.7 bits (73), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Query: 154 VHSGLGGAYYFRNCAGEN---VAIVKPTDEEPYAPNNPKG--FVGSALGQPGLKRSVRVG 208
+ +G G+Y+ + V + KP DEEPY P +PK + RS +
Sbjct: 167 IQTGSSGSYFVYGTRADESVPVGVFKPKDEEPYGPFSPKWTKWAHRTFFPCLFGRSCLIP 226
Query: 209 ETGFR-EVAAYLLD 221
G+ E AA LLD
Sbjct: 227 NLGYICESAASLLD 240
>sp|P14799|RS27A_NEUCR Ubiquitin-40S ribosomal protein S27a OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=ubi-3 PE=1 SV=4
Length = 154
Score = 34.7 bits (78), Expect = 2.4, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 31/51 (60%)
Query: 29 RVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYGDTVLKN 79
++FV+T G + +E++ SD VK+K+Q +P +++ LI+ L++
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P0CG76|UBIQA_DICDI Polyubiquitin-A OS=Dictyostelium discoideum GN=ubqA PE=1 SV=1
Length = 381
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
G ++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 75 GGMQIFVKTLTGKTITLEVEGSDNIENVKTKIQDKEGIPPDQQRLIF 121
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
G ++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 151 GGMQIFVKTLTGKTITLEVEGSDNIENVKTKIQDKEGIPPDQQRLIF 197
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
G ++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 303 GGMQIFVKTLTGKTITLEVEGSDNIENVKTKIQDKEGIPPDQQRLIF 349
Score = 34.3 bits (77), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
G ++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 227 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 273
Score = 33.9 bits (76), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%)
Query: 29 RVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 2 QIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 45
>sp|P0CG83|UBIQP_HORVU Polyubiquitin (Fragment) OS=Hordeum vulgare PE=2 SV=1
Length = 171
Score = 34.7 bits (78), Expect = 2.5, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYGDTVLKN 79
G ++FV+T G + +E++ SD VK K+Q +P +++ LI+ L++
Sbjct: 17 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 70
Score = 34.7 bits (78), Expect = 2.5, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYGDTVLKN 79
G ++FV+T G + +E++ SD VK K+Q +P +++ LI+ L++
Sbjct: 93 GGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 146
>sp|P0CG88|UBIQJ_DICDI Polyubiquitin-J OS=Dictyostelium discoideum GN=ubqJ PE=1 SV=1
Length = 305
Score = 34.7 bits (78), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
G ++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 75 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 121
Score = 34.7 bits (78), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
G ++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 151 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 197
Score = 34.7 bits (78), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
G ++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 227 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 273
Score = 33.9 bits (76), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%)
Query: 29 RVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 2 QIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 45
>sp|P0CG80|UBIQI_DICDI Polyubiquitin-I OS=Dictyostelium discoideum GN=ubqI PE=1 SV=1
Length = 305
Score = 34.7 bits (78), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
G ++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 75 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 121
Score = 34.7 bits (78), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
G ++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 151 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 197
Score = 34.7 bits (78), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
G ++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 227 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 273
Score = 33.9 bits (76), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%)
Query: 29 RVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 2 QIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 45
>sp|P0CG81|UBIQH_DICDI Polyubiquitin-H OS=Dictyostelium discoideum GN=ubqH PE=1 SV=1
Length = 381
Score = 34.7 bits (78), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
G ++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 75 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 121
Score = 34.7 bits (78), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
G ++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 151 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 197
Score = 34.7 bits (78), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
G ++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 227 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 273
Score = 33.9 bits (76), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%)
Query: 29 RVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 2 QIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 45
Score = 33.9 bits (76), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
G ++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 303 GGMQIFVKTLTGKTITLEVECSDNIENVKAKIQDKEGIPPDQQRLIF 349
>sp|P0C224|RL40_NEUCR Ubiquitin-60S ribosomal protein L40 OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=ubi-1 PE=1 SV=2
Length = 128
Score = 34.3 bits (77), Expect = 2.7, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 31/51 (60%)
Query: 29 RVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYGDTVLKN 79
++FV+T G + +E++ SD VK+K+Q +P +++ LI+ L++
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P0CG77|UBIQD_DICDI Polyubiquitin-D OS=Dictyostelium discoideum GN=ubqD PE=1 SV=1
Length = 229
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
G ++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 75 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 121
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
G ++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 151 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 197
Score = 33.9 bits (76), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%)
Query: 29 RVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 2 QIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 45
>sp|P0CG78|UBIQF_DICDI Polyubiquitin-F OS=Dictyostelium discoideum GN=ubqF PE=1 SV=1
Length = 533
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
G ++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 75 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 121
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
G ++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 151 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 197
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
G ++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 227 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 273
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
G ++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 303 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 349
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
G ++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 379 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 425
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
G ++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 455 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 501
Score = 33.9 bits (76), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%)
Query: 29 RVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 2 QIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 45
>sp|P0CG79|UBIQG_DICDI Polyubiquitin-G OS=Dictyostelium discoideum GN=ubqG PE=1 SV=1
Length = 381
Score = 34.3 bits (77), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
G ++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 75 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 121
Score = 34.3 bits (77), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
G ++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 151 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 197
Score = 34.3 bits (77), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
G ++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 227 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 273
Score = 34.3 bits (77), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
G ++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 303 GGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 349
Score = 33.9 bits (76), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%)
Query: 29 RVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIY 72
++FV+T G + +E++ SDN VK K+Q +P +++ LI+
Sbjct: 2 QIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIF 45
>sp|P42739|UBIQP_ACECL Polyubiquitin (Fragment) OS=Acetabularia cliftonii PE=3 SV=2
Length = 423
Score = 34.3 bits (77), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 34/62 (54%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYGDTVLKNDLSYVR 85
G ++FV+T G + +E+ SD VK K+Q +P +++ LI+ L++ L+
Sbjct: 40 GGMQIFVKTLTGKTITLEVQSSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGLTLAD 99
Query: 86 HD 87
++
Sbjct: 100 YN 101
Score = 33.1 bits (74), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYG 73
G ++FV+T G + +E++ SD VK K+Q +P +++ LI+
Sbjct: 116 GGMQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFA 163
Score = 33.1 bits (74), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYG 73
G ++FV+T G + +E++ SD VK K+Q +P +++ LI+
Sbjct: 192 GGMQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFA 239
Score = 33.1 bits (74), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYG 73
G ++FV+T G + +E++ SD VK K+Q +P +++ LI+
Sbjct: 268 GGMQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFA 315
>sp|P23398|UBIQP_STRPU Polyubiquitin (Fragment) OS=Strongylocentrotus purpuratus PE=2 SV=2
Length = 133
Score = 34.3 bits (77), Expect = 3.5, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 32/54 (59%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYGDTVLKN 79
G ++FV+T G + +E++ SD+ VK K+Q +P +++ LI+ L++
Sbjct: 55 GGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLED 108
>sp|P62972|UBIQP_XENLA Polyubiquitin (Fragment) OS=Xenopus laevis PE=1 SV=2
Length = 167
Score = 33.9 bits (76), Expect = 3.7, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYGDTVLKN 79
G ++FV+T G + +E++ SD VK K+Q +P +++ LI+ L++
Sbjct: 14 GGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 67
Score = 33.9 bits (76), Expect = 3.7, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYGDTVLKN 79
G ++FV+T G + +E++ SD VK K+Q +P +++ LI+ L++
Sbjct: 90 GGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 143
>sp|P21899|RL40_TRYBB Ubiquitin-60S ribosomal protein L40 OS=Trypanosoma brucei brucei
PE=2 SV=2
Length = 128
Score = 33.9 bits (76), Expect = 4.3, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 29 RVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYGDTVLK 78
++FV+T G + +E++ SD VK K+Q +P +++ LI+ L+
Sbjct: 2 QIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 51
>sp|P27923|RS27A_MAIZE Ubiquitin-40S ribosomal protein S27a OS=Zea mays GN=UBF9 PE=2
SV=2
Length = 155
Score = 33.9 bits (76), Expect = 4.4, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 29 RVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYGDTVLKN 79
++FV+T G + +E++ SD VK K+Q +P +++ LI+ L++
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P69061|RS27A_KLULA Ubiquitin-40S ribosomal protein S27a OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=ubi3 PE=1 SV=2
Length = 150
Score = 33.9 bits (76), Expect = 4.4, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 29 RVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYGDTVLKN 79
++FV+T G + +E++ SD VK K+Q +P +++ LI+ L++
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P0CH27|RL402_TRYCR Ubiquitin-60S ribosomal protein L40 OS=Trypanosoma cruzi PE=2 SV=1
Length = 356
Score = 33.9 bits (76), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYGDTVLKN 79
G ++FV+T G + +E++ SD VK K+Q +P +++ LI+ L++
Sbjct: 75 GGMQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 128
Score = 33.9 bits (76), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYGDTVLKN 79
G ++FV+T G + +E++ SD VK K+Q +P +++ LI+ L++
Sbjct: 151 GGMQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 204
Score = 33.9 bits (76), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 26 GKRRVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYGDTVLKN 79
G ++FV+T G + +E++ SD VK K+Q +P +++ LI+ L++
Sbjct: 227 GGMQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 280
Score = 33.1 bits (74), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 29 RVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYGDTVLKN 79
++FV+T G + +E++ SD VK K+Q +P +++ LI+ L++
Sbjct: 2 QIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P0C032|RUB3_ORYSJ Ubiquitin-like protein-NEDD8-like protein RUB3 OS=Oryza sativa
subsp. japonica GN=RUB3 PE=3 SV=2
Length = 154
Score = 33.5 bits (75), Expect = 4.6, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 29 RVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYGDTVLKN 79
++FV+T G + +E++ SD VK K+Q +P +++ LI+ L++
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLED 52
>sp|P47905|RS27A_LUPAL Ubiquitin-40S ribosomal protein S27a OS=Lupinus albus PE=3 SV=2
Length = 155
Score = 33.5 bits (75), Expect = 4.8, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 29 RVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYGDTVLKN 79
++FV+T G + +E++ SD VK K+Q +P +++ LI+ L++
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P62981|RS27A_SOLTU Ubiquitin-40S ribosomal protein S27a OS=Solanum tuberosum GN=UBI3
PE=2 SV=2
Length = 156
Score = 33.5 bits (75), Expect = 4.8, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 29 RVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYGDTVLKN 79
++FV+T G + +E++ SD VK K+Q +P +++ LI+ L++
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P62980|RS27A_SOLLC Ubiquitin-40S ribosomal protein S27a OS=Solanum lycopersicum
GN=UBI3 PE=3 SV=2
Length = 156
Score = 33.5 bits (75), Expect = 4.8, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 29 RVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYGDTVLKN 79
++FV+T G + +E++ SD VK K+Q +P +++ LI+ L++
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P0CH10|RL403_CHLRE Ubiquitin-60S ribosomal protein L40 OS=Chlamydomonas reinhardtii
GN=UBI3 PE=1 SV=1
Length = 128
Score = 33.5 bits (75), Expect = 4.9, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 29 RVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYGDTVLKN 79
++FV+T G + +E++ SD VK K+Q +P +++ LI+ L++
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P0CH11|RL401_CHLRE Ubiquitin-60S ribosomal protein L40 OS=Chlamydomonas reinhardtii
GN=UBI1 PE=1 SV=1
Length = 128
Score = 33.5 bits (75), Expect = 4.9, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 29 RVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYGDTVLKN 79
++FV+T G + +E++ SD VK K+Q +P +++ LI+ L++
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P69201|RL40_LEIMA Ubiquitin-60S ribosomal protein L40 OS=Leishmania major
GN=UB-EP52 PE=3 SV=2
Length = 128
Score = 33.5 bits (75), Expect = 5.0, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 29 RVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYGDTVLK 78
++FV+T G + +E++ SD VK K+Q +P +++ LI+ L+
Sbjct: 2 QIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 51
>sp|P69317|UBIQ_LUPPO Ubiquitin OS=Lupinus polyphyllus PE=3 SV=2
Length = 77
Score = 33.5 bits (75), Expect = 5.2, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 29 RVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYGDTVLKN 79
++FV+T G + +E++ SD VK K+Q +P +++ LI+ L++
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P69313|UBIQ_HELAN Ubiquitin OS=Helianthus annuus PE=3 SV=2
Length = 77
Score = 33.5 bits (75), Expect = 5.2, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 29 RVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYGDTVLKN 79
++FV+T G + +E++ SD VK K+Q +P +++ LI+ L++
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P14795|RL40_TRYCR Ubiquitin-60S ribosomal protein L40 OS=Trypanosoma cruzi GN=FUS1
PE=2 SV=2
Length = 128
Score = 33.5 bits (75), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 29 RVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYGDTVLKN 79
++FV+T G + +E++ SD VK K+Q +P +++ LI+ L++
Sbjct: 2 QIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P69310|UBIQ_AVESA Ubiquitin OS=Avena sativa PE=1 SV=1
Length = 76
Score = 33.5 bits (75), Expect = 5.3, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 29 RVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYGDTVLKN 79
++FV+T G + +E++ SD VK K+Q +P +++ LI+ L++
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|P49632|RL40_CAEEL Ubiquitin-60S ribosomal protein L40 OS=Caenorhabditis elegans
GN=ubq-2 PE=3 SV=2
Length = 128
Score = 33.5 bits (75), Expect = 5.4, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 29 RVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYGDTVLKN 79
++FV+T G + +E++ SD VK K+Q +P +++ LI+ L++
Sbjct: 2 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 52
>sp|Q8RUC6|RUB2_ARATH Ubiquitin-NEDD8-like protein RUB2 OS=Arabidopsis thaliana GN=RUB2
PE=1 SV=3
Length = 154
Score = 33.5 bits (75), Expect = 5.4, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 29 RVFVQTEMGYVLGMELDRSDNAHTVKRKLQLALDVPTEERSLIYGDTVLKN 79
++FV+T G + +E++ SD VK K+Q +P +++ LI+ L++
Sbjct: 2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED 52
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 245,676,017
Number of Sequences: 539616
Number of extensions: 11043782
Number of successful extensions: 26098
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 25648
Number of HSP's gapped (non-prelim): 457
length of query: 627
length of database: 191,569,459
effective HSP length: 124
effective length of query: 503
effective length of database: 124,657,075
effective search space: 62702508725
effective search space used: 62702508725
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)