Query 006886
Match_columns 627
No_of_seqs 538 out of 5163
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 11:33:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006886.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006886hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gt4_A Tyrosine-protein kinase 100.0 3.4E-52 1.2E-56 422.8 21.7 249 339-608 31-305 (308)
2 4aoj_A High affinity nerve gro 100.0 4.9E-52 1.7E-56 425.6 22.0 251 339-610 46-320 (329)
3 4asz_A BDNF/NT-3 growth factor 100.0 2.3E-52 7.7E-57 422.2 17.5 250 339-609 18-289 (299)
4 3omv_A RAF proto-oncogene seri 100.0 1.4E-51 4.9E-56 416.4 21.8 249 339-610 41-301 (307)
5 3hmm_A TGF-beta receptor type- 100.0 1.2E-51 4E-56 419.7 15.9 260 339-611 8-299 (303)
6 4fih_A Serine/threonine-protei 100.0 3.3E-50 1.1E-54 411.5 19.0 239 340-603 80-324 (346)
7 3fpq_A Serine/threonine-protei 100.0 1.5E-49 5.1E-54 398.7 22.9 241 340-603 32-283 (290)
8 4g3f_A NF-kappa-beta-inducing 100.0 4E-50 1.4E-54 409.7 18.5 243 339-609 63-316 (336)
9 4b9d_A Serine/threonine-protei 100.0 1.1E-49 3.7E-54 408.3 20.1 241 339-603 29-277 (350)
10 4ase_A Vascular endothelial gr 100.0 8.4E-50 2.9E-54 412.3 18.8 253 339-610 69-348 (353)
11 4aw0_A HPDK1, 3-phosphoinositi 100.0 5.1E-49 1.7E-53 396.7 17.9 249 339-614 37-296 (311)
12 4fie_A Serine/threonine-protei 100.0 5.8E-49 2E-53 412.1 19.0 240 339-603 156-401 (423)
13 3hyh_A Carbon catabolite-derep 100.0 5.1E-48 1.7E-52 384.2 20.3 237 339-603 18-263 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 2.7E-48 9.2E-53 391.5 12.9 237 339-602 29-281 (304)
15 4g31_A Eukaryotic translation 100.0 1E-46 3.4E-51 381.5 19.4 239 339-602 10-279 (299)
16 4b99_A Mitogen-activated prote 100.0 6.8E-44 2.3E-48 374.5 24.5 249 339-603 59-345 (398)
17 4f9c_A Cell division cycle 7-r 100.0 7.7E-44 2.6E-48 370.2 23.0 187 339-537 26-250 (361)
18 3v5w_A G-protein coupled recep 100.0 4.9E-43 1.7E-47 383.2 21.1 241 339-603 194-450 (689)
19 2qkw_B Protein kinase; three-h 100.0 1.5E-42 5.1E-47 357.1 23.3 265 339-609 44-315 (321)
20 3soc_A Activin receptor type-2 100.0 1.1E-42 3.7E-47 358.3 17.3 256 339-610 29-319 (322)
21 3uto_A Twitchin; kinase, muscl 100.0 1.2E-42 4.1E-47 382.8 18.4 243 339-603 162-411 (573)
22 3uim_A Brassinosteroid insensi 100.0 1.6E-42 5.6E-47 357.6 17.7 280 327-609 18-311 (326)
23 3s95_A LIMK-1, LIM domain kina 100.0 2.3E-41 7.8E-46 346.5 21.8 246 339-610 15-283 (310)
24 4hcu_A Tyrosine-protein kinase 100.0 4.1E-41 1.4E-45 337.3 22.4 248 339-611 15-268 (269)
25 3p86_A Serine/threonine-protei 100.0 7.7E-42 2.6E-46 349.6 17.4 255 339-614 42-303 (309)
26 2psq_A Fibroblast growth facto 100.0 6.2E-41 2.1E-45 351.7 22.9 252 339-610 86-365 (370)
27 2nru_A Interleukin-1 receptor- 100.0 3.7E-40 1.3E-44 336.9 26.9 272 326-609 12-306 (307)
28 3fxz_A Serine/threonine-protei 100.0 6.3E-41 2.2E-45 341.0 20.7 240 339-603 25-270 (297)
29 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.6E-40 5.3E-45 332.8 23.1 248 339-611 13-266 (268)
30 3gen_A Tyrosine-protein kinase 100.0 2.4E-40 8.3E-45 334.2 22.6 248 339-611 29-282 (283)
31 3q4u_A Activin receptor type-1 100.0 7.8E-41 2.7E-45 340.8 18.8 251 339-607 13-300 (301)
32 3kul_A Ephrin type-A receptor 100.0 9.7E-41 3.3E-45 344.1 19.5 249 339-612 54-316 (325)
33 2c30_A Serine/threonine-protei 100.0 2.6E-40 8.7E-45 340.3 22.6 240 340-604 51-296 (321)
34 3fe3_A MAP/microtubule affinit 100.0 3.8E-40 1.3E-44 339.6 23.1 238 339-603 20-265 (328)
35 1qcf_A Haematopoetic cell kina 100.0 1.9E-40 6.3E-45 357.8 20.9 247 339-610 193-445 (454)
36 1k9a_A Carboxyl-terminal SRC k 100.0 4.9E-40 1.7E-44 353.9 22.9 248 339-612 198-448 (450)
37 2izr_A Casein kinase I isoform 100.0 5.3E-40 1.8E-44 339.5 21.9 252 339-610 14-282 (330)
38 2qol_A Ephrin receptor; recept 100.0 3.2E-40 1.1E-44 346.5 20.5 247 339-610 50-310 (373)
39 3t9t_A Tyrosine-protein kinase 100.0 1.3E-39 4.3E-44 325.8 23.2 248 339-611 13-266 (267)
40 3zgw_A Maternal embryonic leuc 100.0 6.6E-40 2.3E-44 339.9 21.8 241 339-606 15-264 (347)
41 1opk_A P150, C-ABL, proto-onco 100.0 3.5E-40 1.2E-44 359.1 20.7 248 339-610 225-479 (495)
42 3tt0_A Basic fibroblast growth 100.0 1.7E-39 5.7E-44 342.6 25.1 254 339-612 74-355 (382)
43 3mdy_A Bone morphogenetic prot 100.0 6.7E-40 2.3E-44 339.4 21.6 258 339-611 42-333 (337)
44 3cbl_A C-FES, proto-oncogene t 100.0 9.6E-41 3.3E-45 351.3 15.4 246 339-609 119-374 (377)
45 1csn_A Casein kinase-1; phosph 100.0 8.6E-40 2.9E-44 332.6 21.5 253 339-610 15-284 (298)
46 3l9p_A Anaplastic lymphoma kin 100.0 4.1E-40 1.4E-44 345.2 18.9 251 339-610 76-346 (367)
47 1tki_A Titin; serine kinase, m 100.0 3.6E-40 1.2E-44 339.1 18.0 245 339-605 10-260 (321)
48 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 6.7E-40 2.3E-44 353.0 20.8 248 339-611 189-442 (452)
49 4dc2_A Protein kinase C IOTA t 100.0 1.8E-39 6.3E-44 341.8 23.7 245 339-602 57-318 (396)
50 1o6l_A RAC-beta serine/threoni 100.0 1.8E-39 6.3E-44 335.5 22.9 238 339-603 10-261 (337)
51 3vhe_A Vascular endothelial gr 100.0 1.6E-40 5.3E-45 347.5 15.1 253 339-610 27-356 (359)
52 3niz_A Rhodanese family protei 100.0 8.3E-40 2.8E-44 335.0 20.1 252 339-602 26-300 (311)
53 3dtc_A Mitogen-activated prote 100.0 3.3E-40 1.1E-44 330.9 16.7 245 339-607 12-271 (271)
54 3kn6_A Ribosomal protein S6 ki 100.0 5.9E-40 2E-44 338.1 19.0 246 340-603 17-271 (325)
55 2yab_A Death-associated protei 100.0 1E-39 3.5E-44 340.5 20.8 241 339-602 17-272 (361)
56 3poz_A Epidermal growth factor 100.0 4.6E-40 1.6E-44 339.4 17.8 246 339-610 20-279 (327)
57 4euu_A Serine/threonine-protei 100.0 4.8E-39 1.6E-43 330.6 25.4 264 339-610 14-310 (319)
58 3ugc_A Tyrosine-protein kinase 100.0 3.6E-40 1.2E-44 335.0 16.8 254 339-610 15-292 (295)
59 4eqm_A Protein kinase; transfe 100.0 2.5E-39 8.4E-44 328.8 22.8 252 339-612 16-278 (294)
60 2y0a_A Death-associated protei 100.0 8.7E-40 3E-44 337.1 19.3 242 339-603 16-272 (326)
61 4f0f_A Serine/threonine-protei 100.0 2E-39 6.8E-44 328.1 20.8 247 339-607 24-287 (287)
62 3txo_A PKC-L, NPKC-ETA, protei 100.0 6E-40 2.1E-44 341.4 17.3 238 339-602 28-280 (353)
63 1luf_A Muscle-specific tyrosin 100.0 1E-39 3.5E-44 339.0 18.9 252 339-611 52-337 (343)
64 3g2f_A Bone morphogenetic prot 100.0 9.3E-40 3.2E-44 338.4 18.0 266 339-620 18-329 (336)
65 4fvq_A Tyrosine-protein kinase 100.0 1.2E-39 4E-44 330.1 18.3 252 339-616 13-282 (289)
66 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.4E-39 4.6E-44 336.2 18.9 239 339-605 14-261 (336)
67 1t46_A HOMO sapiens V-KIT hard 100.0 8.2E-40 2.8E-44 335.1 16.8 254 339-611 28-309 (313)
68 3uc3_A Serine/threonine-protei 100.0 2.7E-39 9.4E-44 338.0 21.0 246 339-605 25-277 (361)
69 3a8x_A Protein kinase C IOTA t 100.0 5.1E-39 1.7E-43 333.6 22.6 245 339-602 14-275 (345)
70 3lb7_A RAF proto-oncogene seri 100.0 9.9E-39 3.4E-43 326.3 24.3 249 339-610 41-301 (307)
71 4fr4_A YANK1, serine/threonine 100.0 4.2E-39 1.5E-43 337.8 22.1 240 339-602 20-271 (384)
72 2eva_A TAK1 kinase - TAB1 chim 100.0 8.9E-39 3E-43 326.8 23.9 251 339-611 13-265 (307)
73 1fot_A TPK1 delta, CAMP-depend 100.0 4.6E-39 1.6E-43 330.0 21.6 238 339-603 11-259 (318)
74 3qd2_B Eukaryotic translation 100.0 3.4E-39 1.2E-43 333.2 20.8 240 339-603 11-326 (332)
75 3tki_A Serine/threonine-protei 100.0 8.7E-40 3E-44 336.6 16.2 242 339-604 12-263 (323)
76 3soa_A Calcium/calmodulin-depe 100.0 3.4E-39 1.2E-43 345.4 21.4 242 339-603 16-268 (444)
77 3c0i_A Peripheral plasma membr 100.0 4.6E-39 1.6E-43 335.1 21.8 245 339-603 29-287 (351)
78 1xjd_A Protein kinase C, theta 100.0 1.8E-39 6.2E-44 336.5 18.5 238 339-602 22-269 (345)
79 3qup_A Tyrosine-protein kinase 100.0 2.2E-39 7.5E-44 333.7 18.9 253 339-612 28-301 (323)
80 1rjb_A FL cytokine receptor; k 100.0 2.3E-39 7.9E-44 336.6 19.2 255 339-612 50-337 (344)
81 3kfa_A Tyrosine-protein kinase 100.0 3E-39 1E-43 327.0 19.3 248 339-610 18-272 (288)
82 3op5_A Serine/threonine-protei 100.0 1.5E-39 5.1E-44 340.7 17.3 254 339-610 40-330 (364)
83 3p1a_A MYT1 kinase, membrane-a 100.0 1.2E-38 4.3E-43 326.3 23.7 237 339-603 62-305 (311)
84 2ivs_A Proto-oncogene tyrosine 100.0 2E-39 6.8E-44 332.4 17.8 251 339-610 28-312 (314)
85 2h8h_A Proto-oncogene tyrosine 100.0 2.4E-39 8.3E-44 355.7 19.6 247 339-610 272-524 (535)
86 3kmu_A ILK, integrin-linked ki 100.0 4.8E-39 1.6E-43 322.1 19.9 248 339-609 15-270 (271)
87 3kex_A Receptor tyrosine-prote 100.0 7.1E-40 2.4E-44 337.7 14.3 246 339-610 18-277 (325)
88 1nxk_A MAP kinase-activated pr 100.0 5.5E-39 1.9E-43 340.2 21.4 246 340-606 68-325 (400)
89 2x4f_A Myosin light chain kina 100.0 3.9E-39 1.3E-43 338.1 20.0 241 340-602 95-342 (373)
90 2zv2_A Calcium/calmodulin-depe 100.0 1.8E-39 6.2E-44 330.4 16.9 239 339-603 18-293 (298)
91 2bdw_A Hypothetical protein K1 100.0 4.2E-39 1.4E-43 336.6 20.1 242 339-603 34-285 (362)
92 3llt_A Serine/threonine kinase 100.0 1.1E-39 3.8E-44 341.2 15.6 192 339-537 40-262 (360)
93 3gxj_A TGF-beta receptor type- 100.0 3.3E-41 1.1E-45 343.7 3.8 255 339-611 8-299 (303)
94 2pvf_A Fibroblast growth facto 100.0 1.2E-38 4.1E-43 329.8 23.1 254 339-612 40-321 (334)
95 1qpc_A LCK kinase; alpha beta 100.0 6.1E-39 2.1E-43 323.2 19.8 247 339-610 18-270 (279)
96 1mp8_A Focal adhesion kinase 1 100.0 3.2E-39 1.1E-43 325.7 17.7 246 339-610 20-277 (281)
97 3uzp_A CKI-delta, CKID, casein 100.0 2.1E-38 7.3E-43 321.9 23.8 253 339-611 14-282 (296)
98 3v8s_A RHO-associated protein 100.0 1.8E-39 6.1E-44 343.7 16.4 241 339-603 74-330 (410)
99 1u5q_A Serine/threonine protei 100.0 1.1E-38 3.9E-43 331.5 22.1 243 339-606 59-309 (348)
100 1b6c_B TGF-B superfamily recep 100.0 7E-39 2.4E-43 332.6 20.4 255 339-611 47-338 (342)
101 3e7e_A HBUB1, BUB1A, mitotic c 100.0 6.6E-39 2.3E-43 336.0 20.2 245 339-610 70-340 (365)
102 1ob3_A PFPK5, cell division co 100.0 1.4E-39 5E-44 329.4 14.7 253 339-603 7-281 (288)
103 4hgt_A Casein kinase I isoform 100.0 1.9E-38 6.5E-43 322.2 23.0 253 339-611 14-282 (296)
104 1u59_A Tyrosine-protein kinase 100.0 9.4E-39 3.2E-43 323.3 20.2 250 340-615 16-278 (287)
105 1mqb_A Ephrin type-A receptor 100.0 2.8E-38 9.5E-43 326.9 24.1 247 339-610 49-310 (333)
106 1rdq_E PKA C-alpha, CAMP-depen 100.0 8.7E-39 3E-43 332.4 20.4 238 339-603 46-294 (350)
107 3gni_B Strad alpha; kinase fol 100.0 2.2E-38 7.6E-43 335.0 23.8 193 339-538 30-241 (389)
108 2i0e_A Protein kinase C-beta I 100.0 7.2E-39 2.5E-43 333.0 19.6 239 339-603 25-277 (353)
109 4e5w_A Tyrosine-protein kinase 100.0 5.2E-39 1.8E-43 327.5 18.2 252 339-608 26-301 (302)
110 2ac3_A MAP kinase-interacting 100.0 1.2E-38 4.1E-43 327.1 20.6 249 340-603 19-296 (316)
111 3pls_A Macrophage-stimulating 100.0 1.9E-38 6.5E-43 322.6 21.6 252 339-614 26-292 (298)
112 3lzb_A Epidermal growth factor 100.0 4.7E-39 1.6E-43 331.7 17.3 247 339-611 20-280 (327)
113 2ozo_A Tyrosine-protein kinase 100.0 8E-39 2.7E-43 356.6 20.3 244 341-610 343-599 (613)
114 1kob_A Twitchin; kinase, intra 100.0 1.3E-38 4.3E-43 335.2 20.6 243 339-603 56-305 (387)
115 3c1x_A Hepatocyte growth facto 100.0 8.5E-39 2.9E-43 335.4 19.2 251 339-614 94-360 (373)
116 2w4o_A Calcium/calmodulin-depe 100.0 1.2E-38 4.3E-43 331.5 20.2 242 339-603 58-306 (349)
117 3o0g_A Cell division protein k 100.0 2E-38 6.7E-43 321.8 21.1 251 339-603 7-283 (292)
118 3a62_A Ribosomal protein S6 ki 100.0 1.4E-38 4.9E-43 328.2 20.3 238 339-603 22-277 (327)
119 3g33_A Cell division protein k 100.0 8.6E-39 3E-43 327.0 18.5 255 339-603 14-297 (308)
120 2acx_A G protein-coupled recep 100.0 1.7E-38 5.7E-43 347.0 21.6 244 339-603 189-445 (576)
121 4eut_A Serine/threonine-protei 100.0 1.5E-38 5.2E-43 336.8 20.7 267 339-613 14-313 (396)
122 2xir_A Vascular endothelial gr 100.0 8.8E-39 3E-43 327.9 18.2 254 339-611 32-312 (316)
123 2zmd_A Dual specificity protei 100.0 3.5E-38 1.2E-42 333.0 23.2 241 339-604 61-322 (390)
124 4fl3_A Tyrosine-protein kinase 100.0 9.7E-39 3.3E-43 356.8 20.0 243 340-609 375-631 (635)
125 2i1m_A Macrophage colony-stimu 100.0 2.5E-39 8.6E-44 334.8 14.0 254 339-611 51-328 (333)
126 2pmi_A Negative RE, cyclin-dep 100.0 4.8E-39 1.6E-43 330.3 15.9 257 339-603 10-294 (317)
127 2v62_A Serine/threonine-protei 100.0 4.7E-39 1.6E-43 334.4 16.1 254 339-609 42-328 (345)
128 2qr7_A Ribosomal protein S6 ki 100.0 5.6E-39 1.9E-43 332.8 16.5 245 339-605 27-280 (342)
129 3og7_A AKAP9-BRAF fusion prote 100.0 1.5E-38 5E-43 322.2 18.9 248 339-609 29-288 (289)
130 3dbq_A Dual specificity protei 100.0 3.3E-38 1.1E-42 327.8 21.8 242 339-605 14-276 (343)
131 2a19_B Interferon-induced, dou 100.0 9.2E-39 3.1E-43 322.5 17.2 242 339-612 16-277 (284)
132 3oz6_A Mitogen-activated prote 100.0 4.4E-38 1.5E-42 332.5 23.2 189 339-537 14-234 (388)
133 2h34_A Serine/threonine-protei 100.0 6E-38 2.1E-42 320.9 23.3 252 339-614 39-301 (309)
134 4aw2_A Serine/threonine-protei 100.0 1.9E-38 6.6E-43 338.3 20.4 244 339-603 79-339 (437)
135 3cok_A Serine/threonine-protei 100.0 1.3E-38 4.4E-43 320.6 17.9 239 339-603 16-263 (278)
136 3lxp_A Non-receptor tyrosine-p 100.0 1.2E-38 4.2E-43 327.4 18.0 254 339-612 36-313 (318)
137 3lxl_A Tyrosine-protein kinase 100.0 4.6E-39 1.6E-43 332.0 14.9 256 339-612 28-306 (327)
138 3bhy_A Death-associated protei 100.0 1.8E-38 6.3E-43 320.3 18.9 253 339-614 10-279 (283)
139 2vd5_A DMPK protein; serine/th 100.0 7.3E-39 2.5E-43 339.2 16.6 243 339-603 66-328 (412)
140 3f66_A Hepatocyte growth facto 100.0 3.5E-38 1.2E-42 320.8 20.8 248 339-611 30-293 (298)
141 2y94_A 5'-AMP-activated protei 100.0 4.4E-38 1.5E-42 339.0 22.7 238 339-603 21-267 (476)
142 3ll6_A Cyclin G-associated kin 100.0 1.5E-38 5.1E-43 329.1 18.3 249 339-611 33-310 (337)
143 3fdn_A Serine/threonine-protei 100.0 7.3E-38 2.5E-42 315.4 22.8 240 339-605 14-260 (279)
144 3cc6_A Protein tyrosine kinase 100.0 2.7E-38 9.1E-43 318.9 19.5 246 339-610 17-274 (281)
145 2a2a_A Death-associated protei 100.0 4.5E-38 1.5E-42 323.7 21.5 242 339-603 17-273 (321)
146 3is5_A Calcium-dependent prote 100.0 6.5E-38 2.2E-42 316.8 22.3 243 339-602 27-278 (285)
147 3q60_A ROP5B; pseudokinase, tr 100.0 3.7E-39 1.3E-43 338.6 13.6 245 339-602 67-352 (371)
148 3brb_A Proto-oncogene tyrosine 100.0 4.1E-38 1.4E-42 322.7 21.1 250 339-609 39-308 (313)
149 3sv0_A Casein kinase I-like; t 100.0 4.1E-38 1.4E-42 339.8 22.1 252 339-609 12-278 (483)
150 3lm5_A Serine/threonine-protei 100.0 8.3E-39 2.8E-43 330.0 15.9 244 340-603 35-288 (327)
151 4agu_A Cyclin-dependent kinase 100.0 9.9E-39 3.4E-43 326.9 16.3 250 339-603 8-285 (311)
152 3f3z_A Calcium/calmodulin-depe 100.0 6.8E-38 2.3E-42 315.2 22.2 241 339-603 14-262 (277)
153 1byg_A CSK, protein (C-termina 100.0 9.6E-39 3.3E-43 321.6 15.9 248 339-612 26-276 (278)
154 3dls_A PAS domain-containing s 100.0 2.3E-38 7.8E-43 327.6 19.1 232 339-603 29-275 (335)
155 2buj_A Serine/threonine-protei 100.0 1.8E-38 6.1E-43 325.9 18.0 256 339-614 34-311 (317)
156 3kk8_A Calcium/calmodulin depe 100.0 5.2E-38 1.8E-42 317.1 21.1 244 339-605 11-264 (284)
157 1fvr_A Tyrosine-protein kinase 100.0 4.4E-38 1.5E-42 324.6 20.9 254 339-612 30-303 (327)
158 2wqm_A Serine/threonine-protei 100.0 7.4E-38 2.5E-42 320.3 22.4 255 339-612 37-300 (310)
159 1xbb_A Tyrosine-protein kinase 100.0 3.5E-38 1.2E-42 319.7 19.7 245 341-612 24-282 (291)
160 3hko_A Calcium/calmodulin-depe 100.0 4.4E-38 1.5E-42 327.0 20.9 247 339-603 31-331 (345)
161 1wak_A Serine/threonine-protei 100.0 5.6E-38 1.9E-42 332.5 21.8 258 339-603 42-392 (397)
162 1p4o_A Insulin-like growth fac 100.0 3.8E-38 1.3E-42 324.2 19.6 255 339-614 30-304 (322)
163 2r5t_A Serine/threonine-protei 100.0 1.8E-38 6.1E-43 332.4 17.2 234 339-599 43-286 (373)
164 3ork_A Serine/threonine protei 100.0 1.3E-38 4.6E-43 326.1 15.9 247 339-608 17-280 (311)
165 1vzo_A Ribosomal protein S6 ki 100.0 2.3E-38 7.8E-43 330.4 17.9 244 339-604 59-323 (355)
166 3c4z_A Rhodopsin kinase; Ser/T 100.0 9.7E-38 3.3E-42 340.2 23.5 244 340-602 191-448 (543)
167 4ejn_A RAC-alpha serine/threon 100.0 1.5E-38 5.3E-43 342.2 17.0 237 339-602 153-404 (446)
168 2eue_A Carbon catabolite derep 100.0 8.7E-38 3E-42 314.1 21.0 237 339-603 18-263 (275)
169 1x8b_A WEE1HU, WEE1-like prote 100.0 6.8E-38 2.3E-42 316.6 20.3 241 339-603 16-280 (289)
170 3kvw_A DYRK2, dual specificity 100.0 2.2E-38 7.6E-43 338.7 17.5 193 339-538 102-303 (429)
171 3ttj_A Mitogen-activated prote 100.0 5.5E-38 1.9E-42 338.6 20.3 251 339-603 67-356 (464)
172 2jii_A Serine/threonine-protei 100.0 3.7E-38 1.3E-42 328.6 17.8 255 339-612 47-339 (352)
173 1t4h_A Serine/threonine-protei 100.0 3.2E-37 1.1E-41 312.4 23.8 242 339-603 31-283 (290)
174 2y7j_A Phosphorylase B kinase 100.0 2.6E-37 9E-42 323.6 23.7 242 340-603 100-360 (365)
175 2yex_A Serine/threonine-protei 100.0 1E-37 3.5E-42 313.5 19.6 241 339-603 12-262 (276)
176 2w1i_A JAK2; chromosomal rearr 100.0 4.3E-38 1.5E-42 324.5 17.2 254 339-610 46-323 (326)
177 2yfx_A Tyrosine-protein kinase 100.0 1.3E-37 4.3E-42 321.2 20.5 252 339-611 35-306 (327)
178 3eqc_A Dual specificity mitoge 100.0 9.1E-38 3.1E-42 326.7 19.4 190 339-537 38-233 (360)
179 3mwu_A Calmodulin-domain prote 100.0 3.9E-37 1.3E-41 334.9 24.8 241 339-603 27-277 (486)
180 2vgo_A Serine/threonine-protei 100.0 1.7E-37 5.8E-42 313.5 20.4 238 339-603 19-263 (284)
181 1u46_A ACK-1, activated CDC42 100.0 1.6E-38 5.3E-43 322.1 12.8 251 339-614 23-289 (291)
182 3nsz_A CK II alpha, casein kin 100.0 2.9E-37 9.9E-42 318.8 22.4 250 339-603 41-320 (330)
183 3rgf_A Cyclin-dependent kinase 100.0 8E-38 2.8E-42 332.4 18.7 194 339-538 26-240 (405)
184 2jam_A Calcium/calmodulin-depe 100.0 1.6E-37 5.6E-42 316.9 20.3 242 339-603 14-262 (304)
185 3pfq_A PKC-B, PKC-beta, protei 100.0 1E-37 3.6E-42 350.8 20.7 238 339-602 346-597 (674)
186 1z57_A Dual specificity protei 100.0 8.4E-38 2.9E-42 323.6 18.2 254 339-603 19-329 (339)
187 3byv_A Rhoptry kinase; malaria 100.0 5.6E-39 1.9E-43 338.0 9.4 237 339-602 78-359 (377)
188 3rp9_A Mitogen-activated prote 100.0 1.7E-37 5.9E-42 335.3 21.2 181 339-529 58-279 (458)
189 3mtl_A Cell division protein k 100.0 1.7E-38 5.9E-43 327.2 12.7 253 339-603 7-282 (324)
190 3i6u_A CDS1, serine/threonine- 100.0 1.3E-37 4.5E-42 331.8 19.9 242 339-603 140-400 (419)
191 3a7i_A MST3 kinase, serine/thr 100.0 7.7E-37 2.6E-41 311.7 24.2 241 339-606 27-274 (303)
192 3mi9_A Cell division protein k 100.0 9.5E-38 3.2E-42 325.4 17.8 252 339-603 22-312 (351)
193 1cm8_A Phosphorylated MAP kina 100.0 5.5E-37 1.9E-41 321.3 23.7 251 339-608 30-315 (367)
194 2owb_A Serine/threonine-protei 100.0 8.5E-38 2.9E-42 323.6 17.3 238 339-603 46-292 (335)
195 4aaa_A Cyclin-dependent kinase 100.0 2E-37 6.9E-42 320.2 19.9 254 339-603 30-307 (331)
196 3com_A Serine/threonine-protei 100.0 2.2E-37 7.6E-42 317.3 20.0 241 339-603 34-279 (314)
197 2x7f_A TRAF2 and NCK-interacti 100.0 4E-37 1.4E-41 317.1 22.0 243 339-603 29-287 (326)
198 2j7t_A Serine/threonine-protei 100.0 3.9E-37 1.3E-41 313.6 21.6 241 339-602 24-275 (302)
199 2h6d_A 5'-AMP-activated protei 100.0 7.7E-37 2.6E-41 307.2 23.5 238 339-603 16-262 (276)
200 2rku_A Serine/threonine-protei 100.0 2E-37 6.8E-42 314.6 19.1 239 339-604 20-267 (294)
201 2clq_A Mitogen-activated prote 100.0 1.3E-37 4.3E-42 316.0 17.2 243 340-603 28-279 (295)
202 1q8y_A SR protein kinase; tran 100.0 2.9E-37 1E-41 324.3 20.5 258 339-603 24-334 (373)
203 2vx3_A Dual specificity tyrosi 100.0 2.6E-37 8.8E-42 325.9 20.1 194 339-537 59-261 (382)
204 3q5i_A Protein kinase; CDPK, m 100.0 2.6E-37 9E-42 337.7 20.6 241 339-603 41-302 (504)
205 3nyv_A Calmodulin-domain prote 100.0 2.1E-37 7E-42 337.1 19.5 241 339-603 31-282 (484)
206 2w5a_A Serine/threonine-protei 100.0 1.5E-37 5.2E-42 312.9 16.7 252 339-609 11-274 (279)
207 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.4E-37 4.8E-42 321.1 16.8 248 339-602 39-318 (329)
208 1phk_A Phosphorylase kinase; g 100.0 8.2E-37 2.8E-41 310.6 22.0 242 339-602 22-283 (298)
209 1ua2_A CAK, cell division prot 100.0 3.4E-37 1.2E-41 320.5 19.1 251 339-604 15-293 (346)
210 3lij_A Calcium/calmodulin depe 100.0 3.3E-37 1.1E-41 336.1 19.8 241 339-603 42-292 (494)
211 3pg1_A Mitogen-activated prote 100.0 5.2E-37 1.8E-41 321.2 20.4 250 339-603 27-317 (362)
212 3an0_A Dual specificity mitoge 100.0 1E-37 3.5E-42 323.6 14.8 245 339-603 56-311 (340)
213 2r3i_A Cell division protein k 100.0 8.1E-37 2.8E-41 310.8 21.0 250 339-602 8-283 (299)
214 2xrw_A Mitogen-activated prote 100.0 4.7E-37 1.6E-41 322.5 19.8 247 339-603 30-319 (371)
215 3n9x_A Phosphotransferase; mal 100.0 7.8E-37 2.7E-41 327.3 21.8 187 339-535 31-253 (432)
216 2vwi_A Serine/threonine-protei 100.0 7.6E-38 2.6E-42 318.9 12.5 252 339-602 20-287 (303)
217 3fme_A Dual specificity mitoge 100.0 4.6E-37 1.6E-41 311.1 18.0 244 339-603 12-267 (290)
218 2ycf_A Serine/threonine-protei 100.0 1.1E-36 3.7E-41 313.5 20.8 241 339-602 15-274 (322)
219 2pml_X PFPK7, Ser/Thr protein 100.0 4.5E-37 1.5E-41 319.8 18.2 252 339-603 36-323 (348)
220 2y4i_B KSR2, HKSR2, kinase sup 100.0 2.6E-37 8.9E-42 317.5 16.0 248 339-613 38-306 (319)
221 2rio_A Serine/threonine-protei 100.0 4E-37 1.4E-41 329.6 17.8 245 339-602 20-295 (434)
222 2j0j_A Focal adhesion kinase 1 100.0 6.6E-37 2.3E-41 343.3 20.4 246 339-610 395-652 (656)
223 3e3p_A Protein kinase, putativ 100.0 1.1E-36 3.9E-41 318.3 20.7 259 339-609 28-323 (360)
224 2eu9_A Dual specificity protei 100.0 5.3E-37 1.8E-41 319.8 17.9 254 339-603 24-334 (355)
225 4exu_A Mitogen-activated prote 100.0 2E-36 6.9E-41 317.7 22.1 247 339-603 47-324 (371)
226 2fst_X Mitogen-activated prote 100.0 9.6E-37 3.3E-41 319.2 19.4 251 339-603 34-312 (367)
227 3qyz_A Mitogen-activated prote 100.0 6.1E-37 2.1E-41 320.9 17.7 251 339-603 32-314 (364)
228 3fhr_A MAP kinase-activated pr 100.0 7.4E-37 2.5E-41 316.6 17.1 245 340-604 35-289 (336)
229 3cek_A Dual specificity protei 100.0 3.7E-36 1.3E-40 308.1 22.1 242 339-605 33-295 (313)
230 4e7w_A Glycogen synthase kinas 100.0 7.7E-37 2.6E-41 323.3 17.3 260 339-610 45-331 (394)
231 1blx_A Cyclin-dependent kinase 100.0 6.9E-37 2.4E-41 315.3 16.6 252 339-603 16-297 (326)
232 2wei_A Calmodulin-domain prote 100.0 3.1E-36 1.1E-40 304.7 20.8 241 339-603 27-277 (287)
233 1zy4_A Serine/threonine-protei 100.0 4.2E-36 1.4E-40 305.7 21.7 241 339-603 11-284 (303)
234 2wtk_C Serine/threonine-protei 100.0 3.6E-36 1.2E-40 307.0 21.2 240 339-604 10-265 (305)
235 3eb0_A Putative uncharacterize 100.0 9.6E-37 3.3E-41 321.6 16.9 252 339-602 12-321 (383)
236 1j1b_A Glycogen synthase kinas 100.0 1E-36 3.6E-41 325.0 17.2 253 339-603 59-337 (420)
237 2b9h_A MAP kinase FUS3, mitoge 100.0 3.8E-36 1.3E-40 313.4 20.0 251 339-603 16-306 (353)
238 3coi_A Mitogen-activated prote 100.0 9.2E-37 3.2E-41 318.2 15.2 247 339-603 29-306 (353)
239 3aln_A Dual specificity mitoge 100.0 2.4E-36 8.1E-41 311.6 17.7 249 339-603 27-286 (327)
240 3a99_A Proto-oncogene serine/t 100.0 9.7E-37 3.3E-41 313.5 14.4 233 339-603 48-294 (320)
241 2dyl_A Dual specificity mitoge 100.0 6.1E-36 2.1E-40 307.0 19.3 242 339-603 30-284 (318)
242 2i6l_A Mitogen-activated prote 100.0 5.7E-36 2E-40 307.3 17.8 248 339-603 16-306 (320)
243 3p23_A Serine/threonine-protei 100.0 4.3E-36 1.5E-40 320.8 16.8 239 339-602 29-283 (432)
244 2iwi_A Serine/threonine-protei 100.0 3.2E-36 1.1E-40 308.5 13.5 233 339-603 36-284 (312)
245 3uqc_A Probable conserved tran 100.0 7.4E-35 2.5E-39 294.3 20.3 230 339-614 36-270 (286)
246 3qa8_A MGC80376 protein; kinas 100.0 9.6E-36 3.3E-40 328.3 13.1 267 339-616 19-316 (676)
247 2pzi_A Probable serine/threoni 100.0 2E-35 6.7E-40 334.3 15.9 233 339-608 85-327 (681)
248 3m2w_A MAP kinase-activated pr 100.0 2.1E-34 7E-39 293.2 19.4 227 340-604 24-258 (299)
249 3dzo_A Rhoptry kinase domain; 100.0 2.6E-35 9E-40 313.4 10.4 236 339-602 83-363 (413)
250 2vuw_A Serine/threonine-protei 100.0 2.7E-34 9.4E-39 297.3 9.6 238 337-601 23-329 (336)
251 4azs_A Methyltransferase WBDD; 99.9 4.5E-29 1.5E-33 274.7 5.1 181 341-533 241-437 (569)
252 1ogq_A PGIP-2, polygalacturona 99.9 1.7E-26 5.9E-31 236.1 13.3 189 25-216 2-203 (313)
253 3en9_A Glycoprotease, O-sialog 99.9 8.4E-26 2.9E-30 247.3 9.1 177 339-535 341-539 (540)
254 3rgz_A Protein brassinosteroid 99.9 4.4E-24 1.5E-28 244.9 11.8 192 21-216 4-229 (768)
255 4ecn_A Leucine-rich repeat pro 99.9 2.5E-24 8.7E-29 246.3 7.8 185 26-216 266-579 (876)
256 4eco_A Uncharacterized protein 99.9 3.7E-24 1.3E-28 240.1 7.8 184 28-216 29-336 (636)
257 1zar_A RIO2 kinase; serine kin 99.9 6.9E-22 2.4E-26 198.3 9.7 138 340-507 96-252 (282)
258 4fcg_A Uncharacterized protein 99.8 3.9E-22 1.3E-26 205.1 5.4 186 25-216 23-235 (328)
259 3rgz_A Protein brassinosteroid 99.8 2.1E-21 7E-26 222.7 10.4 114 117-230 631-750 (768)
260 3m19_A Variable lymphocyte rec 99.8 1.8E-20 6.3E-25 185.0 12.6 153 69-222 35-194 (251)
261 3e6j_A Variable lymphocyte rec 99.8 1.7E-19 5.8E-24 175.4 11.9 151 49-202 12-175 (229)
262 1ogq_A PGIP-2, polygalacturona 99.8 6.2E-20 2.1E-24 187.4 8.1 143 69-212 125-270 (313)
263 2v70_A SLIT-2, SLIT homolog 2 99.8 6.9E-19 2.4E-23 169.9 10.4 149 73-225 15-171 (220)
264 2o6q_A Variable lymphocyte rec 99.8 1.5E-18 5.2E-23 173.1 12.6 146 70-216 38-187 (270)
265 2o6s_A Variable lymphocyte rec 99.8 2E-18 6.8E-23 165.1 12.2 146 57-203 7-165 (208)
266 2v70_A SLIT-2, SLIT homolog 2 99.8 4.1E-18 1.4E-22 164.5 13.7 147 57-203 11-170 (220)
267 1zth_A RIO1 serine protein kin 99.8 1.9E-18 6.5E-23 171.1 11.5 133 339-489 52-220 (258)
268 2v9t_B SLIT homolog 2 protein 99.8 1.8E-18 6E-23 167.0 10.8 146 74-223 16-168 (220)
269 2v9t_B SLIT homolog 2 protein 99.8 6E-18 2.1E-22 163.3 14.1 144 57-201 11-167 (220)
270 3rfs_A Internalin B, repeat mo 99.7 6.9E-18 2.4E-22 168.6 14.0 153 69-224 63-222 (272)
271 2o6q_A Variable lymphocyte rec 99.7 8.9E-18 3.1E-22 167.5 14.1 155 69-224 61-222 (270)
272 3e6j_A Variable lymphocyte rec 99.7 1.5E-17 5.3E-22 161.5 13.5 156 59-224 14-176 (229)
273 4fcg_A Uncharacterized protein 99.7 2.6E-18 9E-23 176.4 8.3 145 69-216 127-283 (328)
274 2xot_A Amphoterin-induced prot 99.7 2.3E-18 7.8E-23 179.4 6.0 168 57-225 18-207 (361)
275 1p9a_G Platelet glycoprotein I 99.7 2.4E-17 8.1E-22 166.1 12.4 131 91-223 74-211 (290)
276 1ozn_A Reticulon 4 receptor; N 99.7 1.1E-17 3.9E-22 168.2 9.9 147 69-216 56-207 (285)
277 2z80_A TOLL-like receptor 2, v 99.7 1.8E-17 6.2E-22 172.1 9.5 164 49-216 23-204 (353)
278 2z81_A CD282 antigen, TOLL-lik 99.7 2.1E-17 7.2E-22 182.2 9.1 157 58-216 5-178 (549)
279 2z66_A Variable lymphocyte rec 99.7 1.3E-17 4.3E-22 169.6 6.7 159 57-216 7-181 (306)
280 1w8a_A SLIT protein; signaling 99.7 1.4E-17 4.9E-22 157.0 6.0 128 72-203 11-143 (192)
281 1ozn_A Reticulon 4 receptor; N 99.7 8.2E-17 2.8E-21 161.9 12.0 148 68-216 31-183 (285)
282 3m19_A Variable lymphocyte rec 99.7 1E-16 3.5E-21 158.0 12.0 132 69-201 59-194 (251)
283 2o6s_A Variable lymphocyte rec 99.7 3.2E-16 1.1E-20 149.8 14.5 155 61-224 4-165 (208)
284 2z62_A TOLL-like receptor 4, v 99.7 1.5E-16 5E-21 159.2 12.6 155 69-224 52-241 (276)
285 2z66_A Variable lymphocyte rec 99.7 6.1E-17 2.1E-21 164.6 9.9 145 69-215 78-228 (306)
286 4g8a_A TOLL-like receptor 4; l 99.7 3.1E-17 1E-21 183.8 8.4 144 69-213 52-200 (635)
287 3zyi_A Leucine-rich repeat-con 99.7 1.3E-16 4.6E-21 171.3 12.3 155 69-225 123-308 (452)
288 3zyj_A Leucine-rich repeat-con 99.7 1.2E-16 4.1E-21 171.1 11.9 156 68-225 111-297 (440)
289 1p9a_G Platelet glycoprotein I 99.7 1.3E-16 4.5E-21 160.7 11.4 145 69-216 31-178 (290)
290 3rfs_A Internalin B, repeat mo 99.7 2E-16 6.9E-21 157.8 12.3 136 67-203 83-222 (272)
291 1w8a_A SLIT protein; signaling 99.7 1.4E-16 4.8E-21 150.2 10.5 154 57-210 8-173 (192)
292 3j0a_A TOLL-like receptor 5; m 99.7 1E-16 3.5E-21 185.7 10.7 85 141-225 481-565 (844)
293 3v47_A TOLL-like receptor 5B a 99.7 1.1E-16 3.8E-21 172.1 9.7 155 69-224 212-412 (455)
294 2id5_A Lingo-1, leucine rich r 99.7 1.2E-16 4.1E-21 173.0 9.6 158 58-216 12-182 (477)
295 3zyi_A Leucine-rich repeat-con 99.7 2E-16 6.9E-21 169.9 11.3 157 58-215 55-247 (452)
296 2ell_A Acidic leucine-rich nuc 99.7 1.6E-16 5.5E-21 146.3 9.0 133 69-205 24-165 (168)
297 3o6n_A APL1; leucine-rich repe 99.6 1.1E-16 3.9E-21 168.4 7.8 165 47-212 4-191 (390)
298 3oja_B Anopheles plasmodium-re 99.6 1.4E-16 5E-21 177.2 9.0 144 69-213 51-198 (597)
299 2xwt_C Thyrotropin receptor; s 99.6 1.7E-16 5.8E-21 155.2 8.1 157 55-215 9-184 (239)
300 2ft3_A Biglycan; proteoglycan, 99.6 6.3E-16 2.1E-20 159.0 12.1 144 57-204 33-189 (332)
301 3vq2_A TLR4, TOLL-like recepto 99.6 1.8E-16 6.3E-21 176.8 8.6 145 69-215 376-526 (606)
302 3oja_A Leucine-rich immune mol 99.6 1.2E-16 4E-21 173.1 5.0 147 69-222 99-252 (487)
303 2z62_A TOLL-like receptor 4, v 99.6 3.2E-16 1.1E-20 156.7 7.6 144 69-213 28-176 (276)
304 4b8c_D Glucose-repressible alc 99.6 1.4E-16 4.8E-21 180.5 4.8 177 27-208 130-338 (727)
305 4eco_A Uncharacterized protein 99.6 2.1E-16 7.1E-21 177.1 6.0 146 68-216 205-383 (636)
306 4gyi_A RIO2 kinase; protein ki 99.6 4.1E-16 1.4E-20 160.4 7.7 134 339-489 100-266 (397)
307 3v47_A TOLL-like receptor 5B a 99.6 8.5E-16 2.9E-20 165.1 10.6 135 69-204 275-413 (455)
308 1xku_A Decorin; proteoglycan, 99.6 1.2E-15 4.2E-20 156.6 11.1 141 57-199 31-184 (330)
309 3t6q_A CD180 antigen; protein- 99.6 5E-16 1.7E-20 173.3 8.8 154 59-213 14-180 (606)
310 2o6r_A Variable lymphocyte rec 99.6 2.2E-15 7.5E-20 139.9 10.8 126 74-203 12-141 (177)
311 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 1.1E-15 3.9E-20 168.8 10.4 154 67-225 351-515 (562)
312 2je0_A Acidic leucine-rich nuc 99.6 5.4E-16 1.9E-20 139.7 6.3 124 69-195 17-149 (149)
313 2wfh_A SLIT homolog 2 protein 99.6 2.2E-15 7.6E-20 142.0 10.7 123 73-200 14-140 (193)
314 4glp_A Monocyte differentiatio 99.6 8E-16 2.7E-20 156.6 8.2 143 69-215 117-277 (310)
315 3t6q_A CD180 antigen; protein- 99.6 4.6E-16 1.6E-20 173.6 7.0 145 69-215 376-528 (606)
316 1wwl_A Monocyte differentiatio 99.6 2.9E-16 9.8E-21 160.1 4.1 107 70-177 96-214 (312)
317 1xeu_A Internalin C; cellular 99.6 1.7E-15 5.9E-20 150.2 9.6 138 69-216 41-178 (263)
318 4g8a_A TOLL-like receptor 4; l 99.6 1.5E-15 5.1E-20 170.1 10.1 157 69-225 420-585 (635)
319 3j0a_A TOLL-like receptor 5; m 99.6 9.6E-16 3.3E-20 177.5 8.5 149 58-209 15-171 (844)
320 2o6r_A Variable lymphocyte rec 99.6 1.6E-15 5.4E-20 140.9 8.3 124 57-181 7-141 (177)
321 3zyj_A Leucine-rich repeat-con 99.6 3E-15 1E-19 160.2 11.4 156 58-215 44-236 (440)
322 2z7x_B TOLL-like receptor 1, v 99.6 1.2E-15 4.1E-20 167.0 8.4 151 69-224 324-485 (520)
323 1ziw_A TOLL-like receptor 3; i 99.6 2.4E-15 8.1E-20 170.2 11.0 154 71-225 456-627 (680)
324 1wwl_A Monocyte differentiatio 99.6 7.9E-16 2.7E-20 156.8 6.3 142 69-215 121-279 (312)
325 3vq2_A TLR4, TOLL-like recepto 99.6 1.1E-15 3.9E-20 170.4 8.0 144 68-212 31-179 (606)
326 2z63_A TOLL-like receptor 4, v 99.6 2.3E-15 7.7E-20 166.6 10.3 153 70-224 374-535 (570)
327 3cvr_A Invasion plasmid antige 99.6 1.5E-15 5.2E-20 166.1 8.6 146 48-215 35-185 (571)
328 4ezg_A Putative uncharacterize 99.6 1.6E-15 5.5E-20 143.5 7.7 140 69-216 44-187 (197)
329 2ft3_A Biglycan; proteoglycan, 99.6 3.3E-15 1.1E-19 153.6 10.6 125 89-216 142-270 (332)
330 1xku_A Decorin; proteoglycan, 99.6 2.7E-15 9.3E-20 154.1 9.9 144 70-216 122-269 (330)
331 3oja_B Anopheles plasmodium-re 99.6 2.2E-15 7.7E-20 167.6 10.0 110 69-179 75-186 (597)
332 4ecn_A Leucine-rich repeat pro 99.6 1.1E-15 3.6E-20 175.1 7.3 145 68-216 447-625 (876)
333 2wfh_A SLIT homolog 2 protein 99.6 6.2E-15 2.1E-19 138.9 10.9 126 97-225 13-144 (193)
334 3oja_A Leucine-rich immune mol 99.6 1.4E-15 4.7E-20 164.7 7.2 31 372-403 322-352 (487)
335 2xwt_C Thyrotropin receptor; s 99.6 2.2E-15 7.6E-20 147.2 8.1 146 68-216 54-211 (239)
336 2id5_A Lingo-1, leucine rich r 99.6 2.1E-15 7.1E-20 163.2 8.6 148 68-216 55-206 (477)
337 2je0_A Acidic leucine-rich nuc 99.6 9.9E-16 3.4E-20 138.0 4.6 125 91-216 14-146 (149)
338 1ziw_A TOLL-like receptor 3; i 99.6 1.7E-15 5.7E-20 171.4 7.5 137 69-206 25-165 (680)
339 2ell_A Acidic leucine-rich nuc 99.6 2.8E-15 9.7E-20 137.9 7.5 126 91-217 21-154 (168)
340 2z81_A CD282 antigen, TOLL-lik 99.6 2.7E-15 9.3E-20 165.2 8.4 149 69-224 361-514 (549)
341 2xot_A Amphoterin-induced prot 99.6 1.6E-14 5.3E-19 150.3 12.8 148 60-216 14-169 (361)
342 3o6n_A APL1; leucine-rich repe 99.6 7.8E-15 2.7E-19 154.3 10.3 109 69-178 69-179 (390)
343 3o53_A Protein LRIM1, AGAP0063 99.5 6.4E-16 2.2E-20 157.9 1.7 147 69-222 99-252 (317)
344 4ay9_X Follicle-stimulating ho 99.5 1.1E-14 3.7E-19 150.9 10.9 96 57-153 9-117 (350)
345 1h6t_A Internalin B; cell adhe 99.5 9.7E-15 3.3E-19 147.1 9.9 138 69-216 68-206 (291)
346 4glp_A Monocyte differentiatio 99.5 2.7E-15 9.1E-20 152.7 4.8 146 70-216 92-257 (310)
347 4ezg_A Putative uncharacterize 99.5 1E-14 3.6E-19 137.9 8.5 127 69-200 66-195 (197)
348 2z63_A TOLL-like receptor 4, v 99.5 6.4E-15 2.2E-19 163.0 7.2 144 68-212 27-175 (570)
349 2z7x_B TOLL-like receptor 1, v 99.5 5E-15 1.7E-19 162.0 6.2 139 69-210 21-164 (520)
350 1h6u_A Internalin H; cell adhe 99.5 1.6E-14 5.5E-19 146.7 9.5 137 69-215 63-200 (308)
351 1ds9_A Outer arm dynein; leuci 99.5 1E-16 3.5E-21 152.0 -6.4 145 69-217 18-181 (198)
352 1h6t_A Internalin B; cell adhe 99.5 1.7E-14 5.8E-19 145.3 9.2 137 69-216 46-184 (291)
353 3o53_A Protein LRIM1, AGAP0063 99.5 7.2E-15 2.5E-19 150.0 6.3 142 65-216 76-220 (317)
354 1h6u_A Internalin H; cell adhe 99.5 2.2E-14 7.6E-19 145.7 9.3 122 70-199 42-164 (308)
355 3a79_B TLR6, VLRB.59, TOLL-lik 99.5 1.6E-14 5.4E-19 159.6 8.5 139 69-210 52-195 (562)
356 2z80_A TOLL-like receptor 2, v 99.5 2.8E-15 9.4E-20 155.6 2.2 146 68-215 75-227 (353)
357 4b8c_D Glucose-repressible alc 99.5 2.2E-15 7.4E-20 170.8 1.2 140 67-210 222-365 (727)
358 1a9n_A U2A', U2A'; complex (nu 99.5 2E-14 6.7E-19 133.4 7.3 125 69-199 19-153 (176)
359 1m9s_A Internalin B; cell inva 99.5 3.7E-14 1.3E-18 156.7 10.5 138 69-216 65-203 (605)
360 1dce_A Protein (RAB geranylger 99.5 4.1E-14 1.4E-18 155.5 8.5 117 71-192 443-566 (567)
361 1o6v_A Internalin A; bacterial 99.4 1.2E-13 4.2E-18 148.7 9.9 138 69-215 221-358 (466)
362 1m9s_A Internalin B; cell inva 99.4 6.4E-14 2.2E-18 154.9 7.8 137 69-216 43-181 (605)
363 2r9u_A Variable lymphocyte rec 99.4 2.4E-13 8.3E-18 125.6 10.2 104 72-179 15-120 (174)
364 3cvr_A Invasion plasmid antige 99.4 1.4E-13 4.7E-18 150.7 9.9 118 69-204 80-197 (571)
365 3g39_A Variable lymphocyte rec 99.4 1.8E-13 6.2E-18 126.0 9.3 104 72-179 12-117 (170)
366 3g39_A Variable lymphocyte rec 99.4 2.2E-13 7.7E-18 125.4 9.1 105 96-203 11-119 (170)
367 1jl5_A Outer protein YOPM; leu 99.4 3.3E-14 1.1E-18 152.3 3.3 135 69-215 11-158 (454)
368 1a9n_A U2A', U2A'; complex (nu 99.4 6.6E-14 2.3E-18 129.8 4.8 125 89-217 14-147 (176)
369 1xeu_A Internalin C; cellular 99.4 2E-13 6.8E-18 135.3 8.6 124 69-201 63-187 (263)
370 4fmz_A Internalin; leucine ric 99.4 2.4E-13 8.3E-18 140.4 7.9 139 69-216 177-317 (347)
371 2r9u_A Variable lymphocyte rec 99.4 5.7E-13 2E-17 123.1 9.1 102 97-201 15-120 (174)
372 3g06_A SSPH2 (leucine-rich rep 99.4 1.3E-13 4.5E-18 152.6 5.5 145 48-210 14-164 (622)
373 1o6v_A Internalin A; bacterial 99.4 4.5E-13 1.5E-17 144.3 9.3 138 69-215 199-336 (466)
374 4fmz_A Internalin; leucine ric 99.4 3E-13 1E-17 139.7 7.3 139 68-216 198-339 (347)
375 3bz5_A Internalin-J, INLJ; leu 99.4 6.9E-13 2.4E-17 142.2 10.2 100 69-179 148-248 (457)
376 3bz5_A Internalin-J, INLJ; leu 99.4 9.9E-13 3.4E-17 141.0 11.3 116 70-197 43-159 (457)
377 1dce_A Protein (RAB geranylger 99.4 6.3E-13 2.2E-17 146.0 9.0 104 96-203 443-550 (567)
378 1jl5_A Outer protein YOPM; leu 99.4 2.2E-12 7.4E-17 138.2 11.6 132 70-216 112-243 (454)
379 2ast_B S-phase kinase-associat 99.3 2.8E-14 9.7E-19 146.7 -3.5 147 69-216 93-253 (336)
380 2ifg_A High affinity nerve gro 99.3 1.4E-12 4.9E-17 134.6 7.5 98 77-178 16-117 (347)
381 2ca6_A RAN GTPase-activating p 99.3 1.3E-13 4.4E-18 144.8 -2.4 148 69-216 60-250 (386)
382 3g06_A SSPH2 (leucine-rich rep 99.3 5.1E-12 1.8E-16 139.9 9.9 134 69-215 121-289 (622)
383 1ds9_A Outer arm dynein; leuci 99.3 6.1E-14 2.1E-18 132.7 -5.2 124 69-199 48-185 (198)
384 2ast_B S-phase kinase-associat 99.2 4.1E-13 1.4E-17 138.0 -1.2 147 69-216 118-278 (336)
385 3goz_A Leucine-rich repeat-con 99.2 4.9E-13 1.7E-17 139.0 -0.9 135 69-203 22-184 (362)
386 2ifg_A High affinity nerve gro 99.2 1.2E-11 4.1E-16 127.7 8.3 102 98-201 12-118 (347)
387 2ca6_A RAN GTPase-activating p 99.2 1.7E-13 5.9E-18 143.8 -5.9 147 69-216 94-280 (386)
388 3tm0_A Aminoglycoside 3'-phosp 99.2 7.3E-11 2.5E-15 116.6 12.1 136 340-486 20-212 (263)
389 3goz_A Leucine-rich repeat-con 99.2 3.9E-12 1.3E-16 132.2 1.7 128 73-201 2-153 (362)
390 4ay9_X Follicle-stimulating ho 99.1 2.5E-10 8.6E-15 117.9 9.4 148 71-221 82-237 (350)
391 1z7x_W Ribonuclease inhibitor; 99.1 3.4E-12 1.2E-16 137.1 -4.9 148 69-216 227-404 (461)
392 1z7x_W Ribonuclease inhibitor; 99.1 2.3E-12 7.8E-17 138.5 -6.7 135 69-204 199-359 (461)
393 1nd4_A Aminoglycoside 3'-phosp 99.1 3.4E-10 1.2E-14 111.5 9.4 132 341-487 26-214 (264)
394 3dxp_A Putative acyl-COA dehyd 99.0 1.8E-09 6.3E-14 111.8 11.7 141 340-488 44-249 (359)
395 3rw6_A Nuclear RNA export fact 99.0 3.4E-12 1.2E-16 125.1 -9.0 162 55-219 77-260 (267)
396 3sg8_A APH(2'')-ID; antibiotic 98.9 9.2E-10 3.2E-14 111.2 6.0 183 340-534 26-287 (304)
397 3sb4_A Hypothetical leucine ri 98.9 3.5E-09 1.2E-13 108.2 8.7 144 69-216 101-303 (329)
398 3un9_A NLR family member X1; l 98.9 8.8E-11 3E-15 122.1 -3.5 106 94-199 101-224 (372)
399 3un9_A NLR family member X1; l 98.8 3.8E-11 1.3E-15 124.8 -9.1 133 69-201 101-254 (372)
400 3sb4_A Hypothetical leucine ri 98.8 4.8E-09 1.6E-13 107.2 5.4 146 69-216 49-280 (329)
401 3ogk_B Coronatine-insensitive 98.5 3.6E-09 1.2E-13 117.2 -4.6 35 92-126 376-411 (592)
402 3ogk_B Coronatine-insensitive 98.5 9.7E-09 3.3E-13 113.8 -2.4 142 70-214 139-297 (592)
403 3r70_A Aminoglycoside phosphot 98.4 7.1E-07 2.4E-11 90.6 10.6 133 340-488 43-238 (320)
404 4gkh_A Aminoglycoside 3'-phosp 98.4 2E-06 6.9E-11 84.8 12.5 136 341-487 31-223 (272)
405 1io0_A Tropomodulin; LRR prote 98.4 1.9E-08 6.6E-13 93.5 -2.6 111 89-199 31-164 (185)
406 3rw6_A Nuclear RNA export fact 98.4 1.6E-07 5.3E-12 91.9 3.5 101 90-192 137-257 (267)
407 3tdw_A Gentamicin resistance p 98.3 2.9E-06 9.8E-11 85.5 12.6 137 340-488 25-225 (306)
408 3d1u_A Putative fructosamine-3 98.3 7.5E-06 2.6E-10 81.5 13.1 141 340-486 21-215 (288)
409 2p1m_B Transport inhibitor res 98.2 6.9E-08 2.4E-12 106.9 -3.4 126 91-216 102-241 (594)
410 2p1m_B Transport inhibitor res 98.1 4.8E-08 1.6E-12 108.1 -6.2 108 92-200 370-495 (594)
411 3ats_A Putative uncharacterize 98.1 4.6E-06 1.6E-10 85.9 9.2 79 340-418 26-121 (357)
412 3ovc_A Hygromycin-B 4-O-kinase 98.1 1.2E-05 4.1E-10 82.9 11.7 144 340-488 47-244 (362)
413 4fdw_A Leucine rich hypothetic 98.1 5.2E-06 1.8E-10 86.8 8.9 77 70-150 158-236 (401)
414 1io0_A Tropomodulin; LRR prote 98.1 2.4E-07 8.3E-12 86.0 -1.3 108 69-177 36-164 (185)
415 2ra8_A Uncharacterized protein 98.1 8.1E-07 2.8E-11 91.4 1.7 144 69-216 139-313 (362)
416 2q83_A YTAA protein; 2635576, 98.0 3.8E-05 1.3E-09 78.3 12.6 143 340-486 38-251 (346)
417 4fdw_A Leucine rich hypothetic 98.0 1.6E-05 5.6E-10 83.0 9.1 139 69-215 203-350 (401)
418 2olc_A MTR kinase, methylthior 97.9 8.5E-05 2.9E-09 77.5 13.2 74 340-415 36-120 (397)
419 3jr1_A Putative fructosamine-3 97.9 0.0001 3.6E-09 73.9 12.5 140 340-483 42-232 (312)
420 2ra8_A Uncharacterized protein 97.7 2.2E-06 7.4E-11 88.2 -2.0 147 68-216 106-285 (362)
421 2pyw_A Uncharacterized protein 97.6 0.00046 1.6E-08 72.5 13.7 74 456-530 231-312 (420)
422 3f7w_A Putative fructosamine-3 97.5 0.00063 2.1E-08 67.5 12.4 73 340-416 21-96 (288)
423 1zyl_A Hypothetical protein YI 97.5 0.00093 3.2E-08 67.5 13.8 145 341-488 33-224 (328)
424 3feg_A Choline/ethanolamine ki 97.3 0.0012 4.1E-08 68.0 11.5 144 340-487 56-254 (379)
425 2ppq_A HSK, HK, homoserine kin 97.2 0.0025 8.5E-08 64.1 12.2 145 340-486 28-216 (322)
426 3dxq_A Choline/ethanolamine ki 97.2 0.0012 4E-08 65.9 9.7 141 340-488 24-203 (301)
427 3csv_A Aminoglycoside phosphot 97.2 0.0013 4.5E-08 66.6 10.2 145 340-488 24-218 (333)
428 3e4g_A ATP synthase subunit S, 97.1 0.00022 7.5E-09 64.6 2.6 81 95-175 62-150 (176)
429 1nw1_A Choline kinase (49.2 KD 97.0 0.0066 2.3E-07 63.7 13.8 72 340-416 79-158 (429)
430 3rfe_A Platelet glycoprotein I 96.9 0.00067 2.3E-08 58.4 4.0 36 141-176 32-67 (130)
431 3c5i_A Choline kinase; choline 96.8 0.002 7E-08 66.2 8.1 73 340-416 39-120 (369)
432 2qg7_A Ethanolamine kinase PV0 96.7 0.014 4.8E-07 61.7 13.1 74 340-417 114-188 (458)
433 3i1a_A Spectinomycin phosphotr 96.6 0.0071 2.4E-07 61.4 10.2 32 457-488 206-237 (339)
434 4fs7_A Uncharacterized protein 96.6 0.0056 1.9E-07 63.5 9.6 54 158-214 156-212 (394)
435 3rfe_A Platelet glycoprotein I 96.6 0.0032 1.1E-07 54.1 6.2 56 73-131 12-68 (130)
436 2yle_A Protein spire homolog 1 96.5 0.025 8.6E-07 52.5 12.2 102 416-533 34-135 (229)
437 1pgv_A TMD-1, tropomodulin TMD 96.5 0.00014 4.7E-09 67.2 -3.2 86 89-174 36-136 (197)
438 1pgv_A TMD-1, tropomodulin TMD 96.1 0.00066 2.3E-08 62.6 -0.8 109 68-177 40-170 (197)
439 4gt6_A Cell surface protein; l 96.1 0.0067 2.3E-07 62.9 6.6 110 85-199 256-370 (394)
440 4h09_A Hypothetical leucine ri 95.9 0.019 6.5E-07 59.0 8.9 125 88-216 211-339 (379)
441 3e4g_A ATP synthase subunit S, 95.8 0.0024 8.3E-08 57.7 1.4 84 69-153 61-153 (176)
442 4gt6_A Cell surface protein; l 95.5 0.018 6.1E-07 59.6 6.9 116 94-215 242-362 (394)
443 3mes_A Choline kinase; malaria 95.4 0.081 2.8E-06 55.1 11.4 74 340-417 76-157 (424)
444 3f2s_A CK, chetk-alpha, cholin 95.3 0.18 6.1E-06 52.0 13.2 143 340-486 58-279 (401)
445 4h09_A Hypothetical leucine ri 95.1 0.077 2.6E-06 54.4 10.1 30 184-213 284-313 (379)
446 4fs7_A Uncharacterized protein 95.0 0.077 2.6E-06 54.8 9.8 129 84-216 61-191 (394)
447 2ks1_B Epidermal growth factor 94.7 0.021 7.2E-07 38.0 2.8 32 258-289 10-41 (44)
448 2l2t_A Receptor tyrosine-prote 94.3 0.022 7.6E-07 37.7 2.2 32 258-289 9-40 (44)
449 2k1k_A Ephrin type-A receptor 93.1 0.031 1.1E-06 36.0 1.3 31 255-285 7-37 (38)
450 3g15_A CK, chetk-alpha, cholin 90.6 0.83 2.8E-05 47.1 9.5 29 459-487 246-280 (401)
451 2jwa_A Receptor tyrosine-prote 89.4 0.14 4.7E-06 33.9 1.5 27 260-287 13-39 (44)
452 4ann_A ESSB; membrane protein, 86.9 1.4 4.7E-05 40.8 7.1 116 388-535 43-158 (215)
453 4ano_A ESSB; membrane protein, 82.6 3 0.0001 38.7 7.2 115 388-535 48-163 (219)
454 3cxl_A N-chimerin; SH2, RHO-GA 66.6 0.75 2.6E-05 48.4 -1.5 57 340-400 148-214 (463)
455 3ls8_A Phosphatidylinositol 3- 56.7 1.1E+02 0.0036 33.0 12.8 47 433-486 453-501 (614)
456 2klu_A T-cell surface glycopro 55.5 11 0.00037 27.0 3.3 20 264-283 12-31 (70)
457 1iij_A ERBB-2 receptor protein 53.4 1.8 6.1E-05 27.0 -0.9 7 261-267 10-16 (35)
458 2l34_A TYRO protein tyrosine k 36.0 12 0.00041 23.0 0.9 25 258-282 6-30 (33)
459 2llm_A Amyloid beta A4 protein 41.2 8.1 0.00028 25.1 0.0 27 257-283 15-41 (43)
460 2lz0_A Uncharacterized protein 33.5 59 0.002 25.6 4.9 44 84-128 10-53 (100)
461 1cja_A Protein (actin-fragmin 24.8 3.6E+02 0.012 26.4 9.7 79 404-487 156-237 (342)
462 2l9u_A Receptor tyrosine-prote 23.1 49 0.0017 20.2 1.9 19 266-284 13-31 (40)
463 2lp1_A C99; alzheimer'S D memb 26.9 20 0.00068 28.8 0.0 27 259-285 30-56 (122)
464 2l8s_A Integrin alpha-1; trans 21.4 57 0.0019 22.5 2.3 15 260-274 11-25 (54)
No 1
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=3.4e-52 Score=422.77 Aligned_cols=249 Identities=24% Similarity=0.367 Sum_probs=204.1
Q ss_pred hcccCcCCceeEEEEEec------CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEe
Q 006886 339 AEVLGKGSYGSTYKAILE------DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||+||+|++. +++.||||+++... ...++|.+|+.++.++ +|||||+++|+|.+++..++|||
T Consensus 31 ~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~~~~~~lV~E 109 (308)
T 4gt4_A 31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL-QHPNVVCLLGVVTKDQPLSMIFS 109 (308)
T ss_dssp EEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhC-CCCCCCCcceEEEECCEEEEEEE
Confidence 478999999999999863 46789999997543 3467899999999999 99999999999999999999999
Q ss_pred cCCCCCHHHHhhhcCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEE
Q 006886 411 YMPAGSLFMLLHRNRSD-----------GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCI 479 (627)
Q Consensus 411 ~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki 479 (627)
||++|+|.++|...... ....++|..+++|+.|||.||+|||+++ ||||||||+|||+++++.+||
T Consensus 110 y~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~~Ki 186 (308)
T 4gt4_A 110 YCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKI 186 (308)
T ss_dssp CCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEE
T ss_pred cCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCCCEEE
Confidence 99999999999754211 1246899999999999999999999998 999999999999999999999
Q ss_pred eecccccccCCC------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHH
Q 006886 480 SDVGLAHLINFP------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSV 552 (627)
Q Consensus 480 ~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 552 (627)
+|||+|+..... ....||+.|||||++.++.|+.++|||||||++|||+| |+.||.+... ...+..+
T Consensus 187 ~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~------~~~~~~i 260 (308)
T 4gt4_A 187 SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN------QDVVEMI 260 (308)
T ss_dssp CCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH------HHHHHHH
T ss_pred CCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH------HHHHHHH
Confidence 999999865321 23457899999999999999999999999999999999 8999976432 1222222
Q ss_pred hhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhc
Q 006886 553 VREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQ 608 (627)
Q Consensus 553 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~ 608 (627)
. .+.... ..+++...+.+++.+||+.||++||||.||++.|+.+.
T Consensus 261 ~-~~~~~~----------~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 261 R-NRQVLP----------CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp H-TTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred H-cCCCCC----------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 2 211111 11223345778889999999999999999999998764
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=4.9e-52 Score=425.61 Aligned_cols=251 Identities=25% Similarity=0.405 Sum_probs=201.3
Q ss_pred hcccCcCCceeEEEEEec------CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEec
Q 006886 339 AEVLGKGSYGSTYKAILE------DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||+||+|+++ +++.||||+++... ...++|.+|++++.++ +|||||+++|+|.+.+..++||||
T Consensus 46 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~~~~~~lV~Ey 124 (329)
T 4aoj_A 46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML-QHQHIVRFFGVCTEGRPLLMVFEY 124 (329)
T ss_dssp EEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSEEEEEEC
T ss_pred EEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEEc
Confidence 478999999999999864 47889999997643 2456899999999999 999999999999999999999999
Q ss_pred CCCCCHHHHhhhcCCC----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEee
Q 006886 412 MPAGSLFMLLHRNRSD----------GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISD 481 (627)
Q Consensus 412 ~~~g~L~~~l~~~~~~----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~D 481 (627)
|++|+|.++++..... ...+++|.+++.|+.|||.||+|||+.+ ||||||||+|||+++++.+||+|
T Consensus 125 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~~Ki~D 201 (329)
T 4aoj_A 125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGD 201 (329)
T ss_dssp CTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECC
T ss_pred CCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCcEEEcc
Confidence 9999999999865321 2346999999999999999999999988 99999999999999999999999
Q ss_pred cccccccCCC------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhh
Q 006886 482 VGLAHLINFP------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVR 554 (627)
Q Consensus 482 fG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 554 (627)
||+|+..... ....||+.|||||++.+..++.++|||||||++|||+| |+.||..... .+.+..+..
T Consensus 202 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~------~~~~~~i~~ 275 (329)
T 4aoj_A 202 FGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN------TEAIDCITQ 275 (329)
T ss_dssp CC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH------HHHHHHHHH
T ss_pred cccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH------HHHHHHHHc
Confidence 9999876432 23457899999999999999999999999999999999 8999975432 222222222
Q ss_pred hcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006886 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 555 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~ 610 (627)
.... . ... ....++.+++.+||+.||++||||.||+++|+.+.+.
T Consensus 276 g~~~-~-------~p~---~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 276 GREL-E-------RPR---ACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp TCCC-C-------CCT---TCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred CCCC-C-------Ccc---cccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 1111 0 111 2234567788899999999999999999999998653
No 3
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.3e-52 Score=422.25 Aligned_cols=250 Identities=23% Similarity=0.424 Sum_probs=203.7
Q ss_pred hcccCcCCceeEEEEEec------CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEec
Q 006886 339 AEVLGKGSYGSTYKAILE------DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||+||+|++. ++..||||+++... ...++|.+|+++++++ +|||||+++|+|.+++..++||||
T Consensus 18 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~~~~~~lV~Ey 96 (299)
T 4asz_A 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-QHEHIVKFYGVCVEGDPLIMVFEY 96 (299)
T ss_dssp EEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSEEEEEEC
T ss_pred eeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhC-CCCCCccEEEEEeeCCEEEEEEEc
Confidence 478999999999999864 47789999997643 2457899999999999 999999999999999999999999
Q ss_pred CCCCCHHHHhhhcC--------CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecc
Q 006886 412 MPAGSLFMLLHRNR--------SDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVG 483 (627)
Q Consensus 412 ~~~g~L~~~l~~~~--------~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG 483 (627)
|++|+|.++|+... ......++|.+++.++.|||.||+|||+++ |+||||||+|||+++++.+||+|||
T Consensus 97 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~Ki~DFG 173 (299)
T 4asz_A 97 MKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKIGDFG 173 (299)
T ss_dssp CTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCS
T ss_pred CCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEEECCcc
Confidence 99999999998642 122457999999999999999999999998 9999999999999999999999999
Q ss_pred cccccCCC------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhc
Q 006886 484 LAHLINFP------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREE 556 (627)
Q Consensus 484 ~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 556 (627)
+|+..... ....||+.|||||++.+..|+.++|||||||++|||+| |+.||.+... .+....+....
T Consensus 174 la~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~------~~~~~~i~~~~ 247 (299)
T 4asz_A 174 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN------NEVIECITQGR 247 (299)
T ss_dssp CHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH------HHHHHHHHHTC
T ss_pred cceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHHHcCC
Confidence 99865332 22347899999999999999999999999999999999 8999976432 22222222221
Q ss_pred ccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006886 557 WTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 557 ~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~ 609 (627)
.. . .. .....++.+++.+||+.||++||||+||.+.|+++..
T Consensus 248 ~~-~-------~p---~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 248 VL-Q-------RP---RTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp CC-C-------CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CC-C-------CC---ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 11 0 11 1223456778889999999999999999999998864
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-51 Score=416.41 Aligned_cols=249 Identities=29% Similarity=0.461 Sum_probs=198.1
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCC
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||+||+|+++ ..||||+++.... ..+.|.+|+++++++ +|||||+++|++.+ +..++|||||++|
T Consensus 41 ~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~-~~~~iVmEy~~gG 116 (307)
T 3omv_A 41 STRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKT-RHVNILLFMGYMTK-DNLAIVTQWCEGS 116 (307)
T ss_dssp EEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECS-SSCEEEEECCSSC
T ss_pred eeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEC-CeEEEEEEcCCCC
Confidence 578999999999999976 3699999875432 346799999999999 99999999998764 5689999999999
Q ss_pred CHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----
Q 006886 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491 (627)
Q Consensus 416 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~---- 491 (627)
+|.++++..+ ..++|.+++.|+.|||.||+|||+++ ||||||||+|||+++++.+||+|||+|+.....
T Consensus 117 sL~~~l~~~~----~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 189 (307)
T 3omv_A 117 SLYKHLHVQE----TKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp BHHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred CHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence 9999997542 46999999999999999999999998 999999999999999999999999999876431
Q ss_pred --CCCCCCccccCccccCC---CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhh
Q 006886 492 --TTATRTIGYRAPEVTET---RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVEL 566 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~~---~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 566 (627)
....||+.|||||++.+ ..|+.++|||||||++|||+||+.||.+.... ..+...+..... .+.+
T Consensus 190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~------~~~~~~~~~~~~----~p~~ 259 (307)
T 3omv_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR------DQIIFMVGRGYA----SPDL 259 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH------HHHHHHHHTTCC----CCCS
T ss_pred eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH------HHHHHHHhcCCC----CCCc
Confidence 23468999999999853 46899999999999999999999999754321 112222222111 1111
Q ss_pred hcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006886 567 LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 567 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~ 610 (627)
.. ....+..++.+++.+||+.+|++||||.||+++|+.++.+
T Consensus 260 ~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 260 SK--LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp TT--SCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred cc--ccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 11 0112234567788899999999999999999999998754
No 5
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.2e-51 Score=419.72 Aligned_cols=260 Identities=25% Similarity=0.345 Sum_probs=197.9
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCC----ceEEEEecCCC
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD----EKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~----~~~lv~e~~~~ 414 (627)
.+.||+|+||+||+|+++ |+.||||++.........++.|+..+.++ +|||||+++++|.+++ ..++||||+++
T Consensus 8 ~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l-~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~ 85 (303)
T 3hmm_A 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVML-RHENILGFIAADNKDNGTWTQLWLVSDYHEH 85 (303)
T ss_dssp EEEEEECSSSEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred EEEEeeCCCeEEEEEEEC-CEEEEEEEECccchhhHHHHHHHHHHhcC-CCCCCCcEEEEEEecCCCceEEEEEecCCCC
Confidence 478999999999999985 89999999975433233334455555667 9999999999998764 47899999999
Q ss_pred CCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006886 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEG-----GAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 415 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
|+|.++++.. .++|..+.+++.|++.||+|||+++ .++|+||||||+|||++.++.+||+|||+|+...
T Consensus 86 gsL~~~l~~~------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 159 (303)
T 3hmm_A 86 GSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp CBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred CcHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence 9999999853 4899999999999999999999872 2459999999999999999999999999998764
Q ss_pred CCC--------CCCCCccccCccccCCC------CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCC---------CCHH
Q 006886 490 FPT--------TATRTIGYRAPEVTETR------KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDV---------VDLP 546 (627)
Q Consensus 490 ~~~--------~~~~t~~y~aPE~~~~~------~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~---------~~~~ 546 (627)
... ...||+.|||||++.+. .++.++|||||||++|||+||+.||........ ....
T Consensus 160 ~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~ 239 (303)
T 3hmm_A 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 239 (303)
T ss_dssp TTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHH
T ss_pred CCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHH
Confidence 321 23589999999998764 367899999999999999999887754322111 1111
Q ss_pred HHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006886 547 RWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 547 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~ 611 (627)
.......+. ..++.+.......+....+.+++.+||+.||++||||.||++.|+++.+.+
T Consensus 240 -~~~~~~~~~----~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 240 -EMRKVVCEQ----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp -HHHHHHTTS----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred -HHHHHHhcc----cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 112111111 112222111222456677889999999999999999999999999987653
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=3.3e-50 Score=411.52 Aligned_cols=239 Identities=20% Similarity=0.351 Sum_probs=199.1
Q ss_pred cccCcCCceeEEEEEec-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCCH
Q 006886 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 417 (627)
+.||+|+||+||+|+.+ +|+.||||++.... ...+.+.+|+++++.+ +|||||++++++.+++..|+||||+++|+|
T Consensus 80 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L 158 (346)
T 4fih_A 80 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWVVMEFLEGGAL 158 (346)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEECCCTTEEH
T ss_pred EEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEeCCCCCcH
Confidence 67999999999999976 68999999996543 3456688999999999 999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----CC
Q 006886 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TT 493 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~----~~ 493 (627)
.+++.+. .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+..... .+
T Consensus 159 ~~~l~~~------~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~ 229 (346)
T 4fih_A 159 TDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS 229 (346)
T ss_dssp HHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCC
T ss_pred HHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccc
Confidence 9999753 4899999999999999999999998 999999999999999999999999999876432 35
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChH
Q 006886 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVE 573 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 573 (627)
..||+.|||||++.+..|+.++||||+||++|||++|+.||.+.. .......+. ...... + ....
T Consensus 230 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~------~~~~~~~i~-~~~~~~-----~---~~~~ 294 (346)
T 4fih_A 230 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP------PLKAMKMIR-DNLPPR-----L---KNLH 294 (346)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHH-HSSCCC-----C---SCGG
T ss_pred cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHH-cCCCCC-----C---Cccc
Confidence 579999999999999999999999999999999999999997532 112222221 111111 1 1111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 574 EEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 574 ~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
....++.+++.+||..||++|||++|++++
T Consensus 295 ~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 295 KVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 122355677889999999999999999774
No 7
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.5e-49 Score=398.75 Aligned_cols=241 Identities=24% Similarity=0.384 Sum_probs=193.6
Q ss_pred cccCcCCceeEEEEEec-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCCeeeeeeEEee----CCceEEEEec
Q 006886 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYS----KDEKLVVYSY 411 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lv~e~ 411 (627)
+.||+|+||+||+|..+ ++..||+|++..... ..+.|.+|+++++++ +|||||+++++|.+ ++..++||||
T Consensus 32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~~~~~lvmEy 110 (290)
T 3fpq_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKCIVLVTEL 110 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEeeccCCCcEEEEEEeC
Confidence 57999999999999975 588999999975432 345789999999999 99999999999875 3457899999
Q ss_pred CCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC-CCCeEEeecccccccCC
Q 006886 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ-DLNGCISDVGLAHLINF 490 (627)
Q Consensus 412 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~-~~~~ki~DfG~a~~~~~ 490 (627)
+++|+|.+++.+. ..+++..+..++.||+.||+|||+++ ++|+||||||+|||++. ++.+||+|||+|+....
T Consensus 111 ~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 111 MTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp CCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred CCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 9999999999865 35899999999999999999999986 57999999999999985 79999999999986544
Q ss_pred C--CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006886 491 P--TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 491 ~--~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
. .+..||+.|||||++.+ .|+.++|||||||++|||+||+.||.+.. ........+. .......++
T Consensus 185 ~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~-----~~~~~~~~i~-~~~~~~~~~----- 252 (290)
T 3fpq_A 185 SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ-----NAAQIYRRVT-SGVKPASFD----- 252 (290)
T ss_dssp TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS-----SHHHHHHHHT-TTCCCGGGG-----
T ss_pred CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----cHHHHHHHHH-cCCCCCCCC-----
Confidence 3 34569999999999865 69999999999999999999999997532 1112222222 111111111
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 569 YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
.... .++.+++.+||..||++|||++|++++
T Consensus 253 -~~~~---~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 253 -KVAI---PEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp -GCCC---HHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -ccCC---HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1111 245678889999999999999999763
No 8
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=4e-50 Score=409.71 Aligned_cols=243 Identities=20% Similarity=0.234 Sum_probs=199.1
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCCH
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 417 (627)
.++||+|+||.||+|+.+ +|+.||||+++.... +.+|+++++.+ +|||||++++++.+++..++||||++||+|
T Consensus 63 ~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l-~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L 137 (336)
T 4g3f_A 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGL-SSPRIVPLYGAVREGPWVNIFMELLEGGSL 137 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTC-CCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred CcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEeccCCCcH
Confidence 467999999999999975 689999999975432 24688999999 999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC-CeEEeecccccccCCC-----
Q 006886 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL-NGCISDVGLAHLINFP----- 491 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~-~~ki~DfG~a~~~~~~----- 491 (627)
.+++++. ..+++..+..++.|++.||+|||+++ ||||||||+|||++.++ .+||+|||+|+.....
T Consensus 138 ~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~ 209 (336)
T 4g3f_A 138 GQLIKQM-----GCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 209 (336)
T ss_dssp HHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC--------
T ss_pred HHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccc
Confidence 9999865 35999999999999999999999998 99999999999999997 6999999999876432
Q ss_pred ----CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006886 492 ----TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 492 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
....||+.|||||++.+..|+.++|||||||++|||++|+.||........ . ..+........ .
T Consensus 210 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~---~---~~i~~~~~~~~------~ 277 (336)
T 4g3f_A 210 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL---C---LKIASEPPPIR------E 277 (336)
T ss_dssp ----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC---H---HHHHHSCCGGG------G
T ss_pred eecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH---H---HHHHcCCCCch------h
Confidence 224689999999999999999999999999999999999999986543322 1 11121111100 0
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006886 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~ 609 (627)
.....+ ..+.+++.+||++||++|||+.|++++|.....
T Consensus 278 ~~~~~s---~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~ 316 (336)
T 4g3f_A 278 IPPSCA---PLTAQAIQEGLRKEPVHRASAMELRRKVGKALQ 316 (336)
T ss_dssp SCTTSC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCccCC---HHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence 111222 345667789999999999999999999887643
No 9
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.1e-49 Score=408.34 Aligned_cols=241 Identities=21% Similarity=0.397 Sum_probs=195.8
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||+||+|+.+ +|+.||||++..... ..+.+.+|+++++++ +|||||++++++.+++..|+||||++|
T Consensus 29 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~yiVmEy~~g 107 (350)
T 4b9d_A 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM-KHPNIVQYRESFEENGSLYIVMDYCEG 107 (350)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred eEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHC-CCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence 478999999999999965 689999999975432 346789999999999 999999999999999999999999999
Q ss_pred CCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006886 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
|+|.+++...+ ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+.....
T Consensus 108 g~L~~~i~~~~---~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 181 (350)
T 4b9d_A 108 GDLFKRINAQK---GVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL 181 (350)
T ss_dssp CBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHH
T ss_pred CcHHHHHHHcC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecCCccc
Confidence 99999997543 345799999999999999999999998 999999999999999999999999999877542
Q ss_pred -CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006886 492 -TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
.+..||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+ ....+..+....... . ..
T Consensus 182 ~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~------~~~~~~~i~~~~~~~--~------~~ 247 (350)
T 4b9d_A 182 ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS------MKNLVLKIISGSFPP--V------SL 247 (350)
T ss_dssp HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHTCCCC--C------CT
T ss_pred ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHHcCCCCC--C------Cc
Confidence 23459999999999999999999999999999999999999997542 233333333332211 0 11
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 571 DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
..+ .++.+++.+||+.||++|||++|++++
T Consensus 248 ~~s---~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 248 HYS---YDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp TSC---HHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cCC---HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 122 345677889999999999999999874
No 10
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=8.4e-50 Score=412.28 Aligned_cols=253 Identities=26% Similarity=0.364 Sum_probs=204.3
Q ss_pred hcccCcCCceeEEEEEecC------CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCCeeeeeeEEeeC-CceEEEE
Q 006886 339 AEVLGKGSYGSTYKAILED------GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSK-DEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~------~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-~~~~lv~ 409 (627)
.+.||+|+||+||+|.+.. ++.||||+++.... ..+.|.+|++++.++.+|||||+++|+|.+. +..++||
T Consensus 69 ~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~ 148 (353)
T 4ase_A 69 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 148 (353)
T ss_dssp EEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEE
T ss_pred eeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEE
Confidence 5789999999999998652 35799999976432 3467999999999996679999999999765 5689999
Q ss_pred ecCCCCCHHHHhhhcCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeE
Q 006886 410 SYMPAGSLFMLLHRNRS-----------DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGC 478 (627)
Q Consensus 410 e~~~~g~L~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~k 478 (627)
|||++|+|.++|+..+. .....++|..++.++.|||.||+|||+++ ||||||||+|||+++++.+|
T Consensus 149 Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~vK 225 (353)
T 4ase_A 149 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVK 225 (353)
T ss_dssp ECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEE
T ss_pred EcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCccCccceeeCCCCCEE
Confidence 99999999999976432 11346899999999999999999999998 99999999999999999999
Q ss_pred EeecccccccCCCC------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHH
Q 006886 479 ISDVGLAHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRS 551 (627)
Q Consensus 479 i~DfG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~ 551 (627)
|+|||+|+...... ...||+.|||||++.+..|+.++|||||||++|||+| |+.||.+.... ..+..
T Consensus 226 i~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~------~~~~~ 299 (353)
T 4ase_A 226 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID------EEFCR 299 (353)
T ss_dssp ECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS------HHHHH
T ss_pred ECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH------HHHHH
Confidence 99999998764432 2347889999999999999999999999999999998 99999764322 11222
Q ss_pred HhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006886 552 VVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 552 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~ 610 (627)
.+.++..... . +....++.+++.+||+.||++||||.||+++|+.+.+.
T Consensus 300 ~i~~g~~~~~-------p---~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 300 RLKEGTRMRA-------P---DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp HHHHTCCCCC-------C---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHcCCCCCC-------C---ccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 2222211111 1 11223567788899999999999999999999998654
No 11
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=5.1e-49 Score=396.70 Aligned_cols=249 Identities=16% Similarity=0.300 Sum_probs=205.0
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccc----ccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV----AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~----~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||+||+|+.+ +|+.||||++... ....+.+.+|+++++++ +|||||++++++.+++..|+||||++
T Consensus 37 ~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~yivmEy~~ 115 (311)
T 4aw0_A 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAK 115 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEecCC
Confidence 478999999999999965 6899999999653 23467799999999999 99999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
||+|.+++.+. ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+|+.....
T Consensus 116 gG~L~~~i~~~-----~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 116 NGELLKYIRKI-----GSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp TEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 99999999865 35999999999999999999999998 999999999999999999999999999876422
Q ss_pred ----CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006886 492 ----TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 492 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
.+..||+.|||||++.+..|+.++||||+||++|||++|+.||.+.+ .......+...... +.
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~------~~~~~~~i~~~~~~---~p---- 254 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN------EGLIFAKIIKLEYD---FP---- 254 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCC---CC----
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHcCCCC---CC----
Confidence 34569999999999999999999999999999999999999997532 22223333322210 11
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccccc
Q 006886 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRN 614 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~~~~ 614 (627)
....+ ++.+++.+|+..||++|||++|+...-+-...+-..+
T Consensus 255 --~~~s~---~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~ 296 (311)
T 4aw0_A 255 --EKFFP---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 296 (311)
T ss_dssp --TTCCH---HHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTT
T ss_pred --cccCH---HHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCC
Confidence 11222 4567788999999999999999865544444444443
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=5.8e-49 Score=412.09 Aligned_cols=240 Identities=20% Similarity=0.347 Sum_probs=199.3
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 416 (627)
.+.||+|+||.||+|+.+ +|+.||||++.... ...+.+.+|+++++.+ +|||||+++++|.+++..|+|||||+||+
T Consensus 156 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~~~iVmEy~~gG~ 234 (423)
T 4fie_A 156 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWVVMEFLEGGA 234 (423)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred eeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhC-CCCCCCceEEEEEECCEEEEEEeCCCCCc
Confidence 367999999999999975 68999999996543 3456689999999999 99999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----C
Q 006886 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----T 492 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~----~ 492 (627)
|.++++.. .+++..+..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+..... .
T Consensus 235 L~~~i~~~------~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 305 (423)
T 4fie_A 235 LTDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 305 (423)
T ss_dssp HHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBC
T ss_pred HHHHHhcc------CCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCCCcccc
Confidence 99999753 4899999999999999999999998 999999999999999999999999999876432 3
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006886 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
+..||+.|||||++.+..|+.++|||||||++|||++|+.||.+.. .......+. ..... .+......
T Consensus 306 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~------~~~~~~~i~-~~~~~-----~~~~~~~~ 373 (423)
T 4fie_A 306 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP------PLKAMKMIR-DNLPP-----RLKNLHKV 373 (423)
T ss_dssp CCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHH-HSCCC-----CCSCTTSS
T ss_pred ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHH-cCCCC-----CCcccccC
Confidence 4568999999999999999999999999999999999999997532 122222221 11111 11111222
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
+ .++.+++.+||..||++|||+.|++++
T Consensus 374 s---~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 374 S---PSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp C---HHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred C---HHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 2 345667789999999999999999774
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=5.1e-48 Score=384.20 Aligned_cols=237 Identities=21% Similarity=0.367 Sum_probs=186.1
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||+||+|+.+ +|+.||||++.... ...+.+.+|+++++++ +||||+++++++.+++..++||||+
T Consensus 18 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~~ivmEy~- 95 (275)
T 3hyh_A 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHPHIIKLYDVIKSKDEIIMVIEYA- 95 (275)
T ss_dssp EEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECC-
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEEEEeCC-
Confidence 478999999999999965 68999999996542 2356799999999999 9999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|.+++.+. ..+++..+..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+|+.....
T Consensus 96 ~g~L~~~l~~~-----~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 96 GNELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp CEEHHHHHHHS-----CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecCCCCc
Confidence 68999999764 35999999999999999999999998 999999999999999999999999999876442
Q ss_pred -CCCCCCccccCccccCCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006886 492 -TTATRTIGYRAPEVTETRKA-SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
.+..||+.|||||++.+..+ +.++||||+||++|||++|+.||.+.. .......+...... + .
T Consensus 168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~------~~~~~~~i~~~~~~---~------p 232 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES------IPVLFKNISNGVYT---L------P 232 (275)
T ss_dssp -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCC---C------C
T ss_pred cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHcCCCC---C------C
Confidence 34579999999999998876 579999999999999999999997532 22223322222110 0 1
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
...+ .++.+++.+||+.||++|||++|++++
T Consensus 233 ~~~s---~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 233 KFLS---PGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp TTSC---HHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred CCCC---HHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 1122 345677889999999999999999874
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=2.7e-48 Score=391.49 Aligned_cols=237 Identities=21% Similarity=0.329 Sum_probs=189.3
Q ss_pred hcccCcCCceeEEEEEec----CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEec
Q 006886 339 AEVLGKGSYGSTYKAILE----DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~----~~~~vavK~l~~~~---~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||+||+|+.. .++.||||+++... .....+.+|++++.++ +|||||++++++.+++..++||||
T Consensus 29 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~ivmEy 107 (304)
T 3ubd_A 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV-NHPFIVKLHYAFQTEGKLYLILDF 107 (304)
T ss_dssp EEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCC-CCTTEECEEEEEEETTEEEEEECC
T ss_pred EEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEEEEEc
Confidence 578999999999999853 46789999986542 2334688899999999 999999999999999999999999
Q ss_pred CCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC-
Q 006886 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF- 490 (627)
Q Consensus 412 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~- 490 (627)
++||+|.+++.+. ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+|+....
T Consensus 108 ~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 108 LRGGDLFTRLSKE-----VMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp CTTCEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred CCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 9999999999865 35999999999999999999999998 99999999999999999999999999986532
Q ss_pred ---CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006886 491 ---PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 491 ---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
..+..||+.|||||++.+..|+.++||||+||++|||++|+.||.+.+ ..+....+......
T Consensus 180 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~------~~~~~~~i~~~~~~--------- 244 (304)
T 3ubd_A 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD------RKETMTMILKAKLG--------- 244 (304)
T ss_dssp -CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCC---------
T ss_pred CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC------HHHHHHHHHcCCCC---------
Confidence 235579999999999999999999999999999999999999997542 22222333222110
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 006886 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKM-----DDVVR 602 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~-----~ev~~ 602 (627)
.....+ .++.+++.+||+.||++|||+ +|+++
T Consensus 245 ~p~~~s---~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 245 MPQFLS---PEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp CCTTSC---HHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred CCCcCC---HHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 011122 345677889999999999995 56654
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1e-46 Score=381.54 Aligned_cols=239 Identities=21% Similarity=0.340 Sum_probs=182.6
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCc-----------
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDE----------- 404 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~----------- 404 (627)
.+.||+|+||+||+|+.+ +|+.||||+++.... ..+.+.+|+++++++ +|||||++++++.+.+.
T Consensus 10 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~~~~~~~~~~ 88 (299)
T 4g31_A 10 IQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL-EHPGIVRYFNAWLEKNTTEKLQPSSPKV 88 (299)
T ss_dssp EEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEEC----------CE
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEecCccccccccCCCc
Confidence 478999999999999965 689999999865432 346789999999999 99999999999876543
Q ss_pred -eEEEEecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecc
Q 006886 405 -KLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVG 483 (627)
Q Consensus 405 -~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG 483 (627)
.++||||+++|+|.+++..... ....++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||
T Consensus 89 ~l~ivmE~~~gg~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl~DFG 163 (299)
T 4g31_A 89 YLYIQMQLCRKENLKDWMNGRCT--IEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFG 163 (299)
T ss_dssp EEEEEEECCCSCCHHHHHHTCCS--GGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCC
T ss_pred EEEEEEecCCCCcHHHHHHhcCC--CChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEEccCc
Confidence 6899999999999999986432 234677888999999999999999998 9999999999999999999999999
Q ss_pred cccccCCC----------------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHH
Q 006886 484 LAHLINFP----------------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPR 547 (627)
Q Consensus 484 ~a~~~~~~----------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~ 547 (627)
+|+..... .+..||+.|||||++.+..|+.++|||||||++|||++ ||.... +...
T Consensus 164 la~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~-----~~~~ 235 (299)
T 4g31_A 164 LVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM-----ERVR 235 (299)
T ss_dssp CC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH-----HHHH
T ss_pred cceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc-----HHHH
Confidence 99876432 12358999999999999999999999999999999996 775310 1011
Q ss_pred HHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006886 548 WVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 548 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~ 602 (627)
..... .... +.+ ...+......+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~-~~~~----~p~------~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 236 TLTDV-RNLK----FPP------LFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHH-HTTC----CCH------HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHH-hcCC----CCC------CCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11111 1110 011 11222334567889999999999999999987
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.8e-44 Score=374.52 Aligned_cols=249 Identities=22% Similarity=0.299 Sum_probs=192.0
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCCeeeeeeEEee------CCceEEE
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYS------KDEKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~------~~~~~lv 408 (627)
.+.||+|+||+||+|+.+ +|+.||||+++.... ..+.+.+|+++++.+ +|||||++++++.. .+..|+|
T Consensus 59 ~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~~~~~~~iv 137 (398)
T 4b99_A 59 IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHF-KHDNIIAIKDILRPTVPYGEFKSVYVV 137 (398)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSSCTTTCCCEEEE
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhc-CCCCcceEeeeeecccccccCCEEEEE
Confidence 478999999999999965 699999999975533 235688999999999 99999999998764 3568999
Q ss_pred EecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006886 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 409 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~ 488 (627)
|||++ |+|.+++... ..+++..+..++.|++.||.|||+++ ||||||||+|||++.++.+||+|||+|+.+
T Consensus 138 mE~~~-g~L~~~i~~~-----~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 138 LDLME-SDLHQIIHSS-----QPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp EECCS-EEHHHHHTSS-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EeCCC-CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeecceeeec
Confidence 99995 6899999754 36999999999999999999999998 999999999999999999999999999875
Q ss_pred CC--------CCCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccc-
Q 006886 489 NF--------PTTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWT- 558 (627)
Q Consensus 489 ~~--------~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 558 (627)
.. ..+..||+.|||||++.+. .++.++||||+||++|||++|+.||.+.+.. .....+......
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~------~~l~~I~~~~g~p 282 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV------HQLQLIMMVLGTP 282 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH------HHHHHHHHHHCCC
T ss_pred ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHH------HHHHHHHHhcCCC
Confidence 32 2345799999999998775 5699999999999999999999999864321 111111111000
Q ss_pred -ccccc--------h---hhhcC--CChH----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 559 -AEVFD--------V---ELLKY--QDVE----EEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 559 -~~~~d--------~---~l~~~--~~~~----~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
..... . .+... .... ....++.+++.+||..||++|||++|++++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 283 SPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp CGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred ChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00000 0 00000 0000 012356678889999999999999999874
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=7.7e-44 Score=370.18 Aligned_cols=187 Identities=24% Similarity=0.428 Sum_probs=164.3
Q ss_pred hcccCcCCceeEEEEEec----CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCC
Q 006886 339 AEVLGKGSYGSTYKAILE----DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~----~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||+||+|+.+ .++.||||++... .....+.+|++++..+.+||||+++++++.+.+..++||||+++
T Consensus 26 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~-~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g 104 (361)
T 4f9c_A 26 EDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT-SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEH 104 (361)
T ss_dssp EEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT-SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCC
T ss_pred EEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc-cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCc
Confidence 478999999999999853 4678999998653 34567889999999997899999999999999999999999999
Q ss_pred CCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC-CCeEEeecccccccCCC--
Q 006886 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD-LNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 415 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~-~~~ki~DfG~a~~~~~~-- 491 (627)
|+|.+++. .+++.++..++.|++.||+|||+++ |+||||||+|||++.+ +.+||+|||+|+.....
T Consensus 105 ~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~ 173 (361)
T 4f9c_A 105 ESFLDILN--------SLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI 173 (361)
T ss_dssp CCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSC
T ss_pred ccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccc
Confidence 99999984 2889999999999999999999999 9999999999999887 79999999999754321
Q ss_pred ------------------------------CCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 006886 492 ------------------------------TTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHS 537 (627)
Q Consensus 492 ------------------------------~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~p~~~~ 537 (627)
.+..||+.|+|||++.+. .|+.++||||+||++|||++|+.||...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~ 250 (361)
T 4f9c_A 174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKA 250 (361)
T ss_dssp GGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence 123589999999998775 5899999999999999999999999643
No 18
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=4.9e-43 Score=383.24 Aligned_cols=241 Identities=19% Similarity=0.248 Sum_probs=191.9
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc----cCHHHHHHHHH---HHHHhccCCCeeeeeeEEeeCCceEEEEe
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQME---VVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~---~l~~l~~h~niv~l~~~~~~~~~~~lv~e 410 (627)
.++||+|+||+||+|+.+ +|+.||||++.+.. .....+..|.. ++..+ +|||||++++++.+.+..|+|||
T Consensus 194 ~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~-~HP~IV~l~~~f~~~~~lylVmE 272 (689)
T 3v5w_A 194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHTPDKLSFILD 272 (689)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSS-CCTTBCCEEEEEECSSEEEEEEC
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhC-CCCCEeEEEEEEEECCEEEEEEe
Confidence 478999999999999976 68999999996532 23344445544 34444 89999999999999999999999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC
Q 006886 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF 490 (627)
Q Consensus 411 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~ 490 (627)
|++||+|..++.+. ..+++..+..++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+|+....
T Consensus 273 y~~GGdL~~~l~~~-----~~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 273 LMNGGDLHYHLSQH-----GVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp CCCSCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred cCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 99999999999865 35999999999999999999999998 99999999999999999999999999987654
Q ss_pred C--CCCCCCccccCccccC-CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006886 491 P--TTATRTIGYRAPEVTE-TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 491 ~--~~~~~t~~y~aPE~~~-~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
. .+..||+.|||||++. +..|+.++||||+||++|||++|+.||.+....+ ............. .
T Consensus 345 ~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~---~~~i~~~i~~~~~---------~ 412 (689)
T 3v5w_A 345 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD---KHEIDRMTLTMAV---------E 412 (689)
T ss_dssp CCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC---HHHHHHHHHHCCC---------C
T ss_pred CCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHhhcCCCC---------C
Confidence 3 4567999999999996 4579999999999999999999999997543322 1111121111110 0
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 006886 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPK-----MDDVVRM 603 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs-----~~ev~~~ 603 (627)
-....++ ++.+++.+||..||.+|++ ++||+++
T Consensus 413 ~p~~~S~---~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 413 LPDSFSP---ELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp CCTTSCH---HHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred CCccCCH---HHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 0112223 4556778999999999998 6888763
No 19
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.5e-42 Score=357.14 Aligned_cols=265 Identities=28% Similarity=0.525 Sum_probs=223.4
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEeccccc-CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCCH
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAA-TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 417 (627)
.+.||+|+||.||+|+.++++.||||++..... ..+.+.+|++++..+ +||||+++++++...+..++||||+++|+|
T Consensus 44 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 122 (321)
T 2qkw_B 44 KFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC-RHPHLVSLIGFCDERNEMILIYKYMENGNL 122 (321)
T ss_dssp CCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSC-CCTTBCCEEEECCCTTCCEEEEECCTTCBT
T ss_pred cceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcCCCeEEEEEEcCCCCcH
Confidence 367999999999999988899999999875533 456789999999999 899999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC------
Q 006886 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP------ 491 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~------ 491 (627)
.+++..... ....++|..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 123 ~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 198 (321)
T 2qkw_B 123 KRHLYGSDL-PTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLS 198 (321)
T ss_dssp GGGSSSSCC-CSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCB
T ss_pred HHHHhccCC-CccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence 999975432 2346899999999999999999999998 999999999999999999999999999765321
Q ss_pred CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006886 492 TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
....||+.|+|||++.+..++.++||||||+++|||++|+.||......+......|.............+++.... ..
T Consensus 199 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 277 (321)
T 2qkw_B 199 TVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLAD-KI 277 (321)
T ss_dssp CCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTT-CS
T ss_pred cccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhcc-cc
Confidence 12347889999999988899999999999999999999999998776666667777665544444444444443322 23
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006886 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~ 609 (627)
..+....+.+++.+||+.||++|||+.|++++|+.+..
T Consensus 278 ~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 278 RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 46677889999999999999999999999999998754
No 20
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.1e-42 Score=358.31 Aligned_cols=256 Identities=26% Similarity=0.362 Sum_probs=202.8
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCc----eEEEEecCCC
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDE----KLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~----~~lv~e~~~~ 414 (627)
.+.||+|+||.||+|+.. ++.||||++.........++.|+.++.++ +||||+++++++..... .++||||+++
T Consensus 29 ~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~ 106 (322)
T 3soc_A 29 LEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGM-KHENILQFIGAEKRGTSVDVDLWLITAFHEK 106 (322)
T ss_dssp EEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred hheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcC-CCCCchhhcceeccCCCCCceEEEEEecCCC
Confidence 478999999999999986 79999999976555556677788888888 89999999999987543 6899999999
Q ss_pred CCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc----------CCCCeeecCCCCCCeEecCCCCeEEeeccc
Q 006886 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE----------GGAKFTHGNIKSSNVLLTQDLNGCISDVGL 484 (627)
Q Consensus 415 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~----------~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~ 484 (627)
|+|.++++.. .++|..++.++.|++.||.|||+. + |+||||||+|||++.++.+||+|||+
T Consensus 107 g~L~~~l~~~------~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~---ivH~Dlkp~Nill~~~~~~kL~DFg~ 177 (322)
T 3soc_A 107 GSLSDFLKAN------VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA---ISHRDIKSKNVLLKNNLTACIADFGL 177 (322)
T ss_dssp CBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE---EECSCCSGGGEEECTTCCEEECCCTT
T ss_pred CCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC---EEeCCCChHhEEECCCCeEEEccCCc
Confidence 9999999753 489999999999999999999998 7 99999999999999999999999999
Q ss_pred ccccCCC------CCCCCCccccCccccCCC-----CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHH------
Q 006886 485 AHLINFP------TTATRTIGYRAPEVTETR-----KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPR------ 547 (627)
Q Consensus 485 a~~~~~~------~~~~~t~~y~aPE~~~~~-----~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~------ 547 (627)
++..... ....+|+.|+|||++.+. .++.++||||||+++|||++|+.||.............
T Consensus 178 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 257 (322)
T 3soc_A 178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHP 257 (322)
T ss_dssp CEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSC
T ss_pred ccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCC
Confidence 9765432 224578999999998763 45678899999999999999999998754433322211
Q ss_pred ----HHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006886 548 ----WVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 548 ----~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~ 610 (627)
+........ . .+.+...........++.+++.+||+.||++|||+.|+++.|++++..
T Consensus 258 ~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 258 SLEDMQEVVVHKK-K----RPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp CHHHHHHHHTTSC-C----CCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred chhhhhhhhhccc-C----CCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 111111111 1 111111111224456688899999999999999999999999998753
No 21
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.2e-42 Score=382.78 Aligned_cols=243 Identities=19% Similarity=0.391 Sum_probs=199.5
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 416 (627)
.+.||+|+||.||+|+.+ +|+.||+|++.... ...+.+.+|+++++.+ +||||+++++++.+++..++|||||+||+
T Consensus 162 ~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~iv~E~~~gg~ 240 (573)
T 3uto_A 162 HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL-RHPTLVNLHDAFEDDNEMVMIYEFMSGGE 240 (573)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHT-CCTTBCCEEEEEECSSEEEEEEECCCCCB
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEEEEeecCCCc
Confidence 478999999999999975 68999999986543 2456788999999999 99999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC--CCeEEeecccccccCCCC--
Q 006886 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD--LNGCISDVGLAHLINFPT-- 492 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~--~~~ki~DfG~a~~~~~~~-- 492 (627)
|.+++... ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+|+.+....
T Consensus 241 L~~~i~~~----~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~ 313 (573)
T 3uto_A 241 LFEKVADE----HNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV 313 (573)
T ss_dssp HHHHHTCT----TSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEE
T ss_pred HHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEccCCCce
Confidence 99999643 235899999999999999999999998 9999999999999865 899999999999875543
Q ss_pred -CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006886 493 -TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 493 -~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
+..||+.|||||++.+..|+.++||||+||++|||++|+.||.+... ......+...... ++.. ....
T Consensus 314 ~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~------~~~~~~i~~~~~~---~~~~--~~~~ 382 (573)
T 3uto_A 314 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND------DETLRNVKSCDWN---MDDS--AFSG 382 (573)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHHTTCCC---CCSG--GGTT
T ss_pred eeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH------HHHHHHHHhCCCC---CCcc--cccC
Confidence 34689999999999999999999999999999999999999975432 2222222222111 1100 1112
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
.++ ++.+++.+||..||++|||+.|++++
T Consensus 383 ~s~---~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 383 ISE---DGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp SCH---HHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCH---HHHHHHHHHccCChhHCcCHHHHhcC
Confidence 223 45567789999999999999999874
No 22
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.6e-42 Score=357.59 Aligned_cols=280 Identities=38% Similarity=0.676 Sum_probs=224.9
Q ss_pred CCCCHHHHHHHH-----hcccCcCCceeEEEEEecCCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCCeeeeeeEE
Q 006886 327 FNFDLEDLLRAS-----AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYY 399 (627)
Q Consensus 327 ~~~~~~~l~~~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~ 399 (627)
..+++.++.... .+.||+|+||.||+|+.++++.||||++..... ....+.+|++++..+ +||||+++++++
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~ 96 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFC 96 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTC-CCTTBCCCCEEE
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhc-cCCCccceEEEE
Confidence 345555554443 468999999999999988899999999875432 233688999999999 899999999999
Q ss_pred eeCCceEEEEecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEE
Q 006886 400 YSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCI 479 (627)
Q Consensus 400 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki 479 (627)
...+..++||||+++|+|.+++..... ....++|..+..++.|++.||.|||+...+.|+||||||+|||++.++.+||
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPE-SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCST-TCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 999999999999999999999986532 3456999999999999999999999992223999999999999999999999
Q ss_pred eecccccccCCC-----CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCC--CCCCCCCHHHHHHHH
Q 006886 480 SDVGLAHLINFP-----TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHS--GHDDVVDLPRWVRSV 552 (627)
Q Consensus 480 ~DfG~a~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~--~~~~~~~~~~~~~~~ 552 (627)
+|||+++..... ....||+.|+|||++.+..++.++||||||+++|||++|+.||+.. ..........|+...
T Consensus 176 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 255 (326)
T 3uim_A 176 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255 (326)
T ss_dssp CCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTT
T ss_pred ccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHH
Confidence 999999876432 2234789999999998888999999999999999999999999632 122333455565555
Q ss_pred hhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006886 553 VREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 553 ~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~ 609 (627)
..........+.... .....++...+.+++.+||+.+|.+|||+.|++++|+....
T Consensus 256 ~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~ 311 (326)
T 3uim_A 256 LKEKKLEALVDVDLQ-GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL 311 (326)
T ss_dssp TSSCCSTTSSCTTCT-TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSC
T ss_pred hhchhhhhhcChhhc-cccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcch
Confidence 554444444444332 23456778889999999999999999999999999987533
No 23
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.3e-41 Score=346.48 Aligned_cols=246 Identities=24% Similarity=0.423 Sum_probs=203.5
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccc-ccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV-AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~-~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 416 (627)
.+.||+|+||.||++... +++.||+|++... ....+.+.+|++++.++ +||||+++++++.+++..++||||+++|+
T Consensus 15 ~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 93 (310)
T 3s95_A 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCL-EHPNVLKFIGVLYKDKRLNFITEYIKGGT 93 (310)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred cceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCcCcccEEEEEecCCeeEEEEEecCCCc
Confidence 478999999999999975 5899999988653 23456799999999999 89999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC----
Q 006886 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT---- 492 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~~---- 492 (627)
|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 94 L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (310)
T 3s95_A 94 LRGIIKSMD----SQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166 (310)
T ss_dssp HHHHHHHCC----TTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred HHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence 999998642 45899999999999999999999998 9999999999999999999999999998763321
Q ss_pred --------------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCC---CHHHHHHHHhhh
Q 006886 493 --------------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV---DLPRWVRSVVRE 555 (627)
Q Consensus 493 --------------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~---~~~~~~~~~~~~ 555 (627)
...||+.|+|||++.+..++.++||||||+++|||++|..|+......... ..........
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-- 244 (310)
T 3s95_A 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYC-- 244 (310)
T ss_dssp -------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTC--
T ss_pred ccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccccC--
Confidence 345889999999999999999999999999999999999998754322211 1111111000
Q ss_pred cccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006886 556 EWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 556 ~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~ 610 (627)
. ......+.+++.+||+.||++|||+.|+++.|++++..
T Consensus 245 -------------~---~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 245 -------------P---PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp -------------C---TTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -------------C---CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 0 11112466788899999999999999999999998754
No 24
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.1e-41 Score=337.27 Aligned_cols=248 Identities=22% Similarity=0.403 Sum_probs=207.6
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCCHH
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 418 (627)
.+.||+|+||.||+|...+++.||+|++.......+++.+|++++.++ +||||+++++++.+.+..++||||+++|+|.
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (269)
T 4hcu_A 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 93 (269)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCceEEEEEeCCCCcHH
Confidence 478999999999999998899999999987777788899999999999 8999999999999999999999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC-----CCC
Q 006886 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF-----PTT 493 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~-----~~~ 493 (627)
+++.... ..+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.... ...
T Consensus 94 ~~l~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 166 (269)
T 4hcu_A 94 DYLRTQR----GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 166 (269)
T ss_dssp HHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred HHHHhcC----cccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEeccccccccccccccccccC
Confidence 9997542 35899999999999999999999998 99999999999999999999999999986643 233
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006886 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
..+++.|+|||++.+..++.++||||+|+++|||++ |+.||..... ......+..... ... .
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~------~~~~~~~~~~~~---~~~-----~--- 229 (269)
T 4hcu_A 167 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN------SEVVEDISTGFR---LYK-----P--- 229 (269)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHHHTTCC---CCC-----C---
T ss_pred cccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH------HHHHHHHhcCcc---CCC-----C---
Confidence 446778999999988899999999999999999999 9999975321 111222111100 000 0
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006886 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~ 611 (627)
......+.+++.+||+.+|++|||+.|++++|+++.+..
T Consensus 230 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~g 268 (269)
T 4hcu_A 230 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESG 268 (269)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHcc
Confidence 111235677888999999999999999999999998754
No 25
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=7.7e-42 Score=349.64 Aligned_cols=255 Identities=27% Similarity=0.427 Sum_probs=196.7
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEecccccC---HHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCC
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAAT---KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|+.. ++.||||++...... .+.+.+|++++.++ +||||+++++++...+..++||||+++|
T Consensus 42 ~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 119 (309)
T 3p86_A 42 KEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRL-RHPNIVLFMGAVTQPPNLSIVTEYLSRG 119 (309)
T ss_dssp EEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSTTCCEEEEECCTTC
T ss_pred eeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCceEEEEecCCCC
Confidence 578999999999999874 889999998765332 35688999999999 8999999999999999999999999999
Q ss_pred CHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----
Q 006886 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491 (627)
Q Consensus 416 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~---- 491 (627)
+|.+++..... ...+++..++.++.|++.||+|||+.+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 120 ~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 196 (309)
T 3p86_A 120 SLYRLLHKSGA--REQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSS 196 (309)
T ss_dssp BHHHHHHSTTH--HHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC------------
T ss_pred cHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCCcccccccccc
Confidence 99999975321 124899999999999999999999986 56999999999999999999999999999765432
Q ss_pred CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006886 492 TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
....||+.|+|||++.+..++.++||||||+++|||++|+.||..... ................ .
T Consensus 197 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~------~~~~~~~~~~~~~~~~-------~-- 261 (309)
T 3p86_A 197 KSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNP------AQVVAAVGFKCKRLEI-------P-- 261 (309)
T ss_dssp -----CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCH------HHHHHHHHHSCCCCCC-------C--
T ss_pred ccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhcCCCCCC-------C--
Confidence 334578999999999999999999999999999999999999975421 1111111111111000 0
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccccc
Q 006886 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRN 614 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~~~~ 614 (627)
......+.+++.+||+.+|++|||+.++++.|+.+......+
T Consensus 262 -~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~ 303 (309)
T 3p86_A 262 -RNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP 303 (309)
T ss_dssp -TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-----
T ss_pred -ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCC
Confidence 112235677888999999999999999999999998765443
No 26
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=6.2e-41 Score=351.65 Aligned_cols=252 Identities=26% Similarity=0.411 Sum_probs=203.9
Q ss_pred hcccCcCCceeEEEEEec--------CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEE
Q 006886 339 AEVLGKGSYGSTYKAILE--------DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~--------~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv 408 (627)
.+.||+|+||.||+|+.. ++..||||+++.... ..+.+.+|++++.++.+||||+++++++...+..++|
T Consensus 86 ~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv 165 (370)
T 2psq_A 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 165 (370)
T ss_dssp EEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEE
Confidence 478999999999999853 355799999976432 3457899999999998899999999999999999999
Q ss_pred EecCCCCCHHHHhhhcCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCe
Q 006886 409 YSYMPAGSLFMLLHRNRSD-----------GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG 477 (627)
Q Consensus 409 ~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ 477 (627)
|||+++|+|.+++...... ....+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+
T Consensus 166 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~ 242 (370)
T 2psq_A 166 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVM 242 (370)
T ss_dssp EECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCE
T ss_pred EEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEECCCCCE
Confidence 9999999999999865321 1245899999999999999999999998 9999999999999999999
Q ss_pred EEeecccccccCCC------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHH
Q 006886 478 CISDVGLAHLINFP------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVR 550 (627)
Q Consensus 478 ki~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~ 550 (627)
||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .+. .
T Consensus 243 kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~---~~~---~ 316 (370)
T 2psq_A 243 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---ELF---K 316 (370)
T ss_dssp EECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GHH---H
T ss_pred EEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH---HHH---H
Confidence 99999999866432 12235678999999999999999999999999999999 99999764322 111 1
Q ss_pred HHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006886 551 SVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 551 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~ 610 (627)
. +....... ........+.+++.+||..+|++||++.|+++.|+.+...
T Consensus 317 ~-~~~~~~~~----------~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~ 365 (370)
T 2psq_A 317 L-LKEGHRMD----------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 365 (370)
T ss_dssp H-HHTTCCCC----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred H-HhcCCCCC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 1 11111100 0111223567788899999999999999999999998654
No 27
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=3.7e-40 Score=336.92 Aligned_cols=272 Identities=30% Similarity=0.537 Sum_probs=216.5
Q ss_pred CCCCCHHHHHHHHh-----------cccCcCCceeEEEEEecCCcEEEEEEecccc-----cCHHHHHHHHHHHHHhccC
Q 006886 326 YFNFDLEDLLRASA-----------EVLGKGSYGSTYKAILEDGTTVVVKRLREVA-----ATKREFEQQMEVVGTIGKH 389 (627)
Q Consensus 326 ~~~~~~~~l~~~~~-----------~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~-----~~~~~~~~e~~~l~~l~~h 389 (627)
...|+++++..++. +.||+|+||.||+|.. +++.||||++.... ...+.+.+|++++..+ +|
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h 89 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC-QH 89 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHC-CC
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhc-CC
Confidence 35577788877762 6799999999999997 48899999986532 2356789999999999 99
Q ss_pred CCeeeeeeEEeeCCceEEEEecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCe
Q 006886 390 SNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNV 469 (627)
Q Consensus 390 ~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NI 469 (627)
|||+++++++...+..++||||+++|+|.+++..... ...+++..++.++.|++.||.|||+.+ |+||||||+||
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Ni 164 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG--TPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANI 164 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGG--CCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHE
Confidence 9999999999999999999999999999999975432 346899999999999999999999998 99999999999
Q ss_pred EecCCCCeEEeecccccccCCC------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCC
Q 006886 470 LLTQDLNGCISDVGLAHLINFP------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV 543 (627)
Q Consensus 470 Ll~~~~~~ki~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~ 543 (627)
+++.++.+||+|||+++..... ....+|+.|+|||++.+ .++.++||||||+++|||++|+.||.........
T Consensus 165 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~ 243 (307)
T 2nru_A 165 LLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL 243 (307)
T ss_dssp EECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBT
T ss_pred EEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHH
Confidence 9999999999999999866432 23457899999998865 5889999999999999999999999865433322
Q ss_pred CHHHHHHHHhhhc-ccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006886 544 DLPRWVRSVVREE-WTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 544 ~~~~~~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~ 609 (627)
..+........ ...+.++..+ ..........+.+++.+||+.+|.+|||+.+++++|+++..
T Consensus 244 --~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 244 --LDIKEEIEDEEKTIEDYIDKKM--NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp --THHHHHHHTTSCCHHHHSCSSC--SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred --HHHHHHhhhhhhhhhhhccccc--cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 12222111111 1111122111 12235566778899999999999999999999999999864
No 28
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=6.3e-41 Score=340.99 Aligned_cols=240 Identities=24% Similarity=0.363 Sum_probs=198.2
Q ss_pred hcccCcCCceeEEEEEe-cCCcEEEEEEeccc-ccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCC
Q 006886 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREV-AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~-~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 416 (627)
.+.||+|+||.||+|.. .+++.||||++... ....+.+.+|+.++..+ +||||+++++++...+..++||||+++|+
T Consensus 25 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 103 (297)
T 3fxz_A 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-KNPNIVNYLDSYLVGDELWVVMEYLAGGS 103 (297)
T ss_dssp CEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred eeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcC-CCCCCCeEeEEEEECCEEEEEEECCCCCC
Confidence 37899999999999995 46899999998654 34567789999999999 99999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----C
Q 006886 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----T 492 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~----~ 492 (627)
|.+++... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++...... .
T Consensus 104 L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 174 (297)
T 3fxz_A 104 LTDVVTET------CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174 (297)
T ss_dssp HHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred HHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccC
Confidence 99999753 4899999999999999999999998 999999999999999999999999998776432 2
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006886 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
...||+.|+|||++.+..++.++||||||+++|||++|+.||..... ............. .. ...
T Consensus 175 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~~~~~~~~~-~~--------~~~ 239 (297)
T 3fxz_A 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP------LRALYLIATNGTP-EL--------QNP 239 (297)
T ss_dssp CCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHHCSC-CC--------SCG
T ss_pred CccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCCC-CC--------CCc
Confidence 34589999999999999999999999999999999999999975321 1111111111111 00 111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
......+.+++.+||+.||++|||+.|++++
T Consensus 240 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 240 EKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 1223356778889999999999999999874
No 29
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.6e-40 Score=332.77 Aligned_cols=248 Identities=24% Similarity=0.409 Sum_probs=206.1
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCCHH
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 418 (627)
.+.||+|+||.||+|..+++..||+|++.......+++.+|++++.++ +||||+++++++...+..++||||+++|+|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (268)
T 3sxs_A 13 LKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKL-SHPKLVKFYGVCSKEYPIYIVTEYISNGCLL 91 (268)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCceEEEEEccCCCcHH
Confidence 478999999999999999888999999987777788899999999999 8999999999999999999999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-----C
Q 006886 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-----T 493 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~~-----~ 493 (627)
+++.... ..+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++....... .
T Consensus 92 ~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 164 (268)
T 3sxs_A 92 NYLRSHG----KGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG 164 (268)
T ss_dssp HHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCS
T ss_pred HHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhhhhcccC
Confidence 9997642 35899999999999999999999998 9999999999999999999999999998664432 2
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006886 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
..+|+.|+|||++.+..++.++||||||+++|||++ |+.||..... ............ ...+ ..
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~------~~~~~~~~~~~~---~~~~-----~~- 229 (268)
T 3sxs_A 165 TKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN------SEVVLKVSQGHR---LYRP-----HL- 229 (268)
T ss_dssp CCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH------HHHHHHHHTTCC---CCCC-----TT-
T ss_pred CCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh------HHHHHHHHcCCC---CCCC-----Cc-
Confidence 335678999999988889999999999999999999 9999975321 111111111110 0000 11
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006886 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~ 611 (627)
....+.+++.+||+.+|++|||+.|+++.|+.+++..
T Consensus 230 --~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 230 --ASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp --SCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred --ChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 1235677888999999999999999999999997653
No 30
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2.4e-40 Score=334.15 Aligned_cols=248 Identities=21% Similarity=0.351 Sum_probs=204.5
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCCHH
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 418 (627)
.+.||+|+||.||++..+++..||+|++.......+++.+|++++..+ +||||+++++++.+.+..++||||+++|+|.
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (283)
T 3gen_A 29 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL-SHEKLVQLYGVCTKQRPIFIITEYMANGCLL 107 (283)
T ss_dssp EEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEEEECCCTTCBHH
T ss_pred HhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcC-CCCCEeeEEEEEecCCCeEEEEeccCCCcHH
Confidence 478999999999999999888999999987777788899999999999 8999999999999999999999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC-----CCC
Q 006886 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF-----PTT 493 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~-----~~~ 493 (627)
+++.... ..+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.... ...
T Consensus 108 ~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 180 (283)
T 3gen_A 108 NYLREMR----HRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 180 (283)
T ss_dssp HHHHCGG----GCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTS
T ss_pred HHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEccccccccccccccccccC
Confidence 9997642 35899999999999999999999998 99999999999999999999999999986643 223
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006886 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
..+|+.|+|||++.+..++.++||||||+++|||++ |+.||..... ......+...... .. .
T Consensus 181 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~------~~~~~~~~~~~~~---~~-----~--- 243 (283)
T 3gen_A 181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN------SETAEHIAQGLRL---YR-----P--- 243 (283)
T ss_dssp TTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCH------HHHHHHHHTTCCC---CC-----C---
T ss_pred CccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccCh------hHHHHHHhcccCC---CC-----C---
Confidence 345778999999988899999999999999999998 9999975421 1111111111100 00 0
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006886 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~ 611 (627)
......+.+++.+||+.+|++|||+.|++++|+++.+.+
T Consensus 244 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e 282 (283)
T 3gen_A 244 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282 (283)
T ss_dssp TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence 111235677888999999999999999999999987654
No 31
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=7.8e-41 Score=340.78 Aligned_cols=251 Identities=25% Similarity=0.418 Sum_probs=194.6
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHHHh-ccCCCeeeeeeEEeeC----CceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTI-GKHSNVVPVRAYYYSK----DEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l-~~h~niv~l~~~~~~~----~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+. +++.||||++... ....+..|.+++... .+||||+++++++... ...++||||++
T Consensus 13 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~ 89 (301)
T 3q4u_A 13 LECVGKGRYGEVWRGSW-QGENVAVKIFSSR--DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHE 89 (301)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCT
T ss_pred EEeeccCCCcEEEEEEE-CCEEEEEEEeccc--cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhcc
Confidence 47899999999999998 5899999998653 355666777777763 2899999999987653 45789999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeeecCCCCCCeEecCCCCeEEeecccc
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH--------SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA 485 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a 485 (627)
+|+|.++++. ..+++..++.++.|++.||.||| +.+ |+||||||+|||++.++.+||+|||++
T Consensus 90 ~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 90 MGSLYDYLQL------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp TCBHHHHHTT------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred CCCHHHHHhh------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 9999999964 25899999999999999999999 766 999999999999999999999999999
Q ss_pred cccCCC--------CCCCCCccccCccccCCC------CCCCcchhHHHHHHHHHHHhC----------CCCCCCCCCCC
Q 006886 486 HLINFP--------TTATRTIGYRAPEVTETR------KASQKSDVYSFGVLLLEMLTG----------KAPLQHSGHDD 541 (627)
Q Consensus 486 ~~~~~~--------~~~~~t~~y~aPE~~~~~------~~~~~~Dv~S~Gvvl~el~tg----------~~p~~~~~~~~ 541 (627)
+..... ....||+.|+|||++.+. .++.++||||||+++|||++| +.||......+
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~ 240 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence 765432 223689999999999876 445799999999999999999 78886543322
Q ss_pred CCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006886 542 VVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607 (627)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~ 607 (627)
. .... ............. .............+.+++.+||+.||++|||+.|+++.|+++
T Consensus 241 ~-~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 241 P-SFED-MRKVVCVDQQRPN----IPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp C-CHHH-HHHHHTTSCCCCC----CCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred c-chhh-hhHHHhccCCCCC----CChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 1 1111 1111111111111 111111234566788899999999999999999999999986
No 32
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=9.7e-41 Score=344.06 Aligned_cols=249 Identities=23% Similarity=0.390 Sum_probs=201.3
Q ss_pred hcccCcCCceeEEEEEec----CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecC
Q 006886 339 AEVLGKGSYGSTYKAILE----DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~----~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~ 412 (627)
.+.||+|+||.||+|.+. .+..||||+++... ...+.+.+|++++..+ +||||+++++++.+.+..++||||+
T Consensus 54 ~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~ 132 (325)
T 3kul_A 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF-DHPNIIRLEGVVTRGRLAMIVTEYM 132 (325)
T ss_dssp EEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECGGGCCEEEEECC
T ss_pred eeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCccEEEeeCC
Confidence 478999999999999974 34569999997642 2356789999999999 8999999999999999999999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC
Q 006886 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT 492 (627)
Q Consensus 413 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~~ 492 (627)
++|+|.+++.... ..+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 133 ~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 205 (325)
T 3kul_A 133 ENGSLDTFLRTHD----GQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205 (325)
T ss_dssp TTCBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred CCCcHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence 9999999997542 35999999999999999999999998 9999999999999999999999999998764321
Q ss_pred -------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006886 493 -------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 493 -------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
...+|+.|+|||++.+..++.++||||||+++|||++ |+.||..... ......+......
T Consensus 206 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~------~~~~~~~~~~~~~------ 273 (325)
T 3kul_A 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN------RDVISSVEEGYRL------ 273 (325)
T ss_dssp -CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH------HHHHHHHHTTCCC------
T ss_pred cceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH------HHHHHHHHcCCCC------
Confidence 1224668999999988899999999999999999999 9999975421 1112211111100
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006886 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~~ 612 (627)
.........+.+++.+||..||++|||+.|+++.|+.+.....
T Consensus 274 -----~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 274 -----PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp -----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred -----CCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 0011222456778889999999999999999999999876543
No 33
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2.6e-40 Score=340.32 Aligned_cols=240 Identities=20% Similarity=0.317 Sum_probs=197.7
Q ss_pred cccCcCCceeEEEEEec-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCCH
Q 006886 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 417 (627)
+.||+|+||.||+|+.+ +|+.||||++.... ...+.+.+|+.++..+ +||||+++++++...+..++||||+++|+|
T Consensus 51 ~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 129 (321)
T 2c30_A 51 VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDY-QHFNVVEMYKSYLVGEELWVLMEFLQGGAL 129 (321)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEECCCCSCBH
T ss_pred EEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhC-CCCCcceEEEEEEECCEEEEEEecCCCCCH
Confidence 47999999999999976 79999999987543 3567789999999999 999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----CC
Q 006886 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TT 493 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~----~~ 493 (627)
.+++... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... ..
T Consensus 130 ~~~l~~~------~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 200 (321)
T 2c30_A 130 TDIVSQV------RLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS 200 (321)
T ss_dssp HHHHTTC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCC
T ss_pred HHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCcEEEeeeeeeeecccCcccccc
Confidence 9998642 4899999999999999999999998 999999999999999999999999998776432 33
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChH
Q 006886 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVE 573 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 573 (627)
..||+.|+|||++.+..++.++||||||+++|||++|+.||..... ......+. ....... ....
T Consensus 201 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~------~~~~~~~~-~~~~~~~--------~~~~ 265 (321)
T 2c30_A 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP------VQAMKRLR-DSPPPKL--------KNSH 265 (321)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHH-HSSCCCC--------TTGG
T ss_pred ccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHh-cCCCCCc--------Cccc
Confidence 4689999999999999999999999999999999999999975321 11121111 1111110 0011
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006886 574 EEMVQMLQIALSCVAKVPDSRPKMDDVVRMI 604 (627)
Q Consensus 574 ~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L 604 (627)
.....+.+++.+||+.||++|||+.|++++-
T Consensus 266 ~~~~~l~~li~~~l~~dp~~Rps~~ell~hp 296 (321)
T 2c30_A 266 KVSPVLRDFLERMLVRDPQERATAQELLDHP 296 (321)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 1123466788899999999999999998753
No 34
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=3.8e-40 Score=339.58 Aligned_cols=238 Identities=18% Similarity=0.315 Sum_probs=197.2
Q ss_pred hcccCcCCceeEEEEEe-cCCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCC
Q 006886 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||+|+. .+|+.||||++..... ..+.+.+|+++++.+ +||||+++++++...+..++||||+++
T Consensus 20 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~e~~~~ 98 (328)
T 3fe3_A 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL-NHPNIVKLFEVIETEKTLYLIMEYASG 98 (328)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCEEEEEEECCCC
Confidence 47899999999999997 4799999999976533 245688999999999 899999999999999999999999999
Q ss_pred CCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006886 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 99 ~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 170 (328)
T 3fe3_A 99 GEVFDYLVAH-----GRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL 170 (328)
T ss_dssp CBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGG
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcc
Confidence 9999999765 24899999999999999999999998 999999999999999999999999999876433
Q ss_pred CCCCCCccccCccccCCCCCC-CcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006886 492 TTATRTIGYRAPEVTETRKAS-QKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~~~~~-~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
....||+.|+|||++.+..+. .++||||+||++|||++|+.||.... .......+....... ..
T Consensus 171 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~i~~~~~~~---------p~ 235 (328)
T 3fe3_A 171 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN------LKELRERVLRGKYRI---------PF 235 (328)
T ss_dssp GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCCC---------CT
T ss_pred ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCCC---------CC
Confidence 345689999999999887775 79999999999999999999997542 222222222221110 00
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 571 DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
. ...++.+++.+||..||.+|||++|++++
T Consensus 236 ~---~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 236 Y---MSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp T---SCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred C---CCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1 12345678889999999999999999874
No 35
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.9e-40 Score=357.76 Aligned_cols=247 Identities=26% Similarity=0.469 Sum_probs=205.1
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCCHH
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 418 (627)
.+.||+|+||.||+|.++++..||||+++......+.|.+|++++..+ +||||+++++++. .+..++||||+++|+|.
T Consensus 193 ~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~ 270 (454)
T 1qcf_A 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVKLHAVVT-KEPIYIITEFMAKGSLL 270 (454)
T ss_dssp EEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTC-CCTTBCCEEEEEC-SSSCEEEECCCTTCBHH
T ss_pred EEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhC-CCCCEeeEEEEEe-CCccEEEEeecCCCcHH
Confidence 478999999999999998889999999987766788999999999999 9999999999986 66789999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC-----CC
Q 006886 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-----TT 493 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~-----~~ 493 (627)
++++... ...+++..++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 271 ~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~ 344 (454)
T 1qcf_A 271 DFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 344 (454)
T ss_dssp HHHHSHH---HHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCS
T ss_pred HHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCC
Confidence 9997542 135789999999999999999999998 999999999999999999999999999876432 23
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006886 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
..+++.|+|||++....++.++||||||+++|||++ |+.||..... ......+...... ...
T Consensus 345 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~------~~~~~~i~~~~~~-----------~~~ 407 (454)
T 1qcf_A 345 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN------PEVIRALERGYRM-----------PRP 407 (454)
T ss_dssp SSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH------HHHHHHHHHTCCC-----------CCC
T ss_pred CcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHcCCCC-----------CCC
Confidence 345678999999988899999999999999999999 9999975421 1112221111110 001
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006886 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~ 610 (627)
.....++.+++.+||+.||++|||+++|++.|+++...
T Consensus 408 ~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 408 ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 12234567788899999999999999999999998654
No 36
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=4.9e-40 Score=353.92 Aligned_cols=248 Identities=25% Similarity=0.424 Sum_probs=203.7
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCC-ceEEEEecCCCCCH
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD-EKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~-~~~lv~e~~~~g~L 417 (627)
.+.||+|+||.||+|.++ ++.||||+++... ..+.|.+|++++.++ +||||+++++++...+ ..++||||+++|+|
T Consensus 198 ~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L 274 (450)
T 1k9a_A 198 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 274 (450)
T ss_dssp EEEEEECSSEEEEEEEET-TEEEEEEEESSCT-TSHHHHHHHHHHHTC-CCTTBCCEEEEEECTTSCEEEEEECCTTCBH
T ss_pred EeeecCcCCeeEEEEEec-CCeEEEEEeCCch-HHHHHHHHHHHHHhc-cCCCEEEEEEEEEcCCCceEEEEEecCCCcH
Confidence 478999999999999986 7899999997644 557799999999999 9999999999987765 78999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC-CCCCC
Q 006886 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-TTATR 496 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~-~~~~~ 496 (627)
.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++..... ....+
T Consensus 275 ~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 348 (450)
T 1k9a_A 275 VDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL 348 (450)
T ss_dssp HHHHHHHC---TTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC------CC
T ss_pred HHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCCC
Confidence 99998653 234799999999999999999999998 999999999999999999999999999865432 23346
Q ss_pred CccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHH
Q 006886 497 TIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEE 575 (627)
Q Consensus 497 t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 575 (627)
++.|+|||++.+..++.++||||||+++|||++ |+.||......+ +...+ ....... .. ...
T Consensus 349 ~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~---~~~~i----~~~~~~~-------~p---~~~ 411 (450)
T 1k9a_A 349 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVPRV----EKGYKMD-------AP---DGC 411 (450)
T ss_dssp CTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT---HHHHH----HTTCCCC-------CC---TTC
T ss_pred CcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHH----HcCCCCC-------CC---CcC
Confidence 788999999999999999999999999999998 999998654332 21111 1111100 01 122
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006886 576 MVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 576 ~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~~ 612 (627)
...+.+++.+||+.+|++|||+.++++.|+++...++
T Consensus 412 ~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~~l 448 (450)
T 1k9a_A 412 PPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHEL 448 (450)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHhhc
Confidence 3456778889999999999999999999999987654
No 37
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=5.3e-40 Score=339.46 Aligned_cols=252 Identities=16% Similarity=0.200 Sum_probs=203.5
Q ss_pred hcccCcCCceeEEEEEe-cCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCCH
Q 006886 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 417 (627)
.+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|++++..+.+||||+++++++...+..++||||+ +|+|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L 91 (330)
T 2izr_A 14 GKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSL 91 (330)
T ss_dssp EEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCH
Confidence 47899999999999996 468999999986542 23468899999999989999999999999999999999999 9999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC-----eEEeecccccccCCC-
Q 006886 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN-----GCISDVGLAHLINFP- 491 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~-----~ki~DfG~a~~~~~~- 491 (627)
.+++... ...+++..++.++.|++.||.|||+.+ |+||||||+|||++.++. +||+|||+++.....
T Consensus 92 ~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~ 164 (330)
T 2izr_A 92 EDLFDLC----DRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE 164 (330)
T ss_dssp HHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTT
T ss_pred HHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCC
Confidence 9999864 246999999999999999999999998 999999999999999887 999999999865332
Q ss_pred ----------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccc
Q 006886 492 ----------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEV 561 (627)
Q Consensus 492 ----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (627)
....||+.|+|||++.+..++.++||||||+++|||++|+.||......+ .......+.......
T Consensus 165 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~---~~~~~~~i~~~~~~~-- 239 (330)
T 2izr_A 165 TKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADT---LKERYQKIGDTKRAT-- 239 (330)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSS---HHHHHHHHHHHHHHS--
T ss_pred CCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccccc---HHHHHHHHHhhhccC--
Confidence 23458999999999999999999999999999999999999998754332 222222221111000
Q ss_pred cchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006886 562 FDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 562 ~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~ 610 (627)
..... ....+ ++.+++..||+.+|.+||++.+|.+.|+++...
T Consensus 240 -~~~~~-~~~~p----~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~ 282 (330)
T 2izr_A 240 -PIEVL-CENFP----EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 282 (330)
T ss_dssp -CHHHH-TTTCH----HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred -CHHHH-hccCh----HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence 00000 01111 677888899999999999999999999987644
No 38
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=3.2e-40 Score=346.48 Aligned_cols=247 Identities=22% Similarity=0.443 Sum_probs=192.5
Q ss_pred hcccCcCCceeEEEEEec----CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecC
Q 006886 339 AEVLGKGSYGSTYKAILE----DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~----~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~ 412 (627)
.+.||+|+||.||+|+.+ ++..||||+++... ...++|.+|++++.++ +||||+++++++...+..++||||+
T Consensus 50 ~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 128 (373)
T 2qol_A 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYM 128 (373)
T ss_dssp CEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSCEEEEECC
T ss_pred eeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCceEEEEeCC
Confidence 478999999999999865 57789999987542 2346799999999999 9999999999999999999999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC
Q 006886 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT 492 (627)
Q Consensus 413 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~~ 492 (627)
++|+|.++++.. ...+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 129 ~~~sL~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 201 (373)
T 2qol_A 129 ENGSLDSFLRKH----DAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201 (373)
T ss_dssp TTCBHHHHHHTT----TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred CCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence 999999999754 246899999999999999999999998 9999999999999999999999999998764322
Q ss_pred C-------CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006886 493 T-------ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 493 ~-------~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
. ..+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ......+......
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~------~~~~~~i~~~~~~------ 269 (373)
T 2qol_A 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN------QDVIKAVDEGYRL------ 269 (373)
T ss_dssp ------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH------HHHHHHHHTTEEC------
T ss_pred ccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHcCCCC------
Confidence 1 123567999999998899999999999999999998 9999975421 1111111111100
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006886 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~ 610 (627)
.........+.+++.+||+.+|++||++.++++.|+.+...
T Consensus 270 -----~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 270 -----PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp -----CCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -----CCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 01112234577888899999999999999999999998643
No 39
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.3e-39 Score=325.82 Aligned_cols=248 Identities=22% Similarity=0.387 Sum_probs=206.9
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCCHH
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 418 (627)
.+.||+|+||.||++...+++.||+|++.......+.+.+|++++..+ +||||+++++++...+..++||||+++|+|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (267)
T 3t9t_A 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPICLVTEFMEHGCLS 91 (267)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSCEEEECCCTTCBHH
T ss_pred eeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCeEEEEeCCCCCcHH
Confidence 478999999999999998889999999987766778899999999999 8999999999999999999999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC-----CCC
Q 006886 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF-----PTT 493 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~-----~~~ 493 (627)
+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.... ...
T Consensus 92 ~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 164 (267)
T 3t9t_A 92 DYLRTQR----GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 164 (267)
T ss_dssp HHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred HHHhhCc----ccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEccccccccccccccccccc
Confidence 9997642 35899999999999999999999998 99999999999999999999999999986643 223
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006886 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
..++..|+|||++.+..++.++||||||+++|||++ |+.||.... .......+.... .. .. ..
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~------~~~~~~~i~~~~-~~--~~-----~~-- 228 (267)
T 3t9t_A 165 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS------NSEVVEDISTGF-RL--YK-----PR-- 228 (267)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHHHTTC-CC--CC-----CT--
T ss_pred ccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCC------HHHHHHHHhcCC-cC--CC-----Cc--
Confidence 346778999999988889999999999999999999 899997532 112222211111 00 00 01
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006886 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~ 611 (627)
.....+.+++.+||+.+|++||++.+++++|+++.+..
T Consensus 229 -~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (267)
T 3t9t_A 229 -LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESG 266 (267)
T ss_dssp -TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred -cCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 11235677888999999999999999999999997653
No 40
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.6e-40 Score=339.87 Aligned_cols=241 Identities=18% Similarity=0.326 Sum_probs=192.5
Q ss_pred hcccCcCCceeEEEEEe-cCCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCC
Q 006886 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|+. .+|+.||||++..... ..+.+.+|++++..+ +||||+++++++...+..++||||+++|
T Consensus 15 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~~lv~E~~~gg 93 (347)
T 3zgw_A 15 HETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNL-RHQHICQLYHVLETANKIFMVLEYCPGG 93 (347)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred EEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhC-CCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence 47899999999999996 4789999999865432 234688999999999 8999999999999999999999999999
Q ss_pred CHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----
Q 006886 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491 (627)
Q Consensus 416 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~---- 491 (627)
+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 94 ~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~ 165 (347)
T 3zgw_A 94 ELFDYIISQ-----DRLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYH 165 (347)
T ss_dssp BHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC--------
T ss_pred CHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCcc
Confidence 999999764 35899999999999999999999998 999999999999999999999999998765432
Q ss_pred -CCCCCCccccCccccCCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006886 492 -TTATRTIGYRAPEVTETRKA-SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
.+..||+.|+|||++.+..+ +.++||||+||++|||++|+.||.... .......+...... ..
T Consensus 166 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~------~~~~~~~i~~~~~~---------~p 230 (347)
T 3zgw_A 166 LQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN------VMALYKKIMRGKYD---------VP 230 (347)
T ss_dssp ------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCC---------CC
T ss_pred ccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHcCCCC---------CC
Confidence 23458999999999988775 899999999999999999999997532 22222222222111 00
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 006886 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQ 606 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~ 606 (627)
.. ....+.+++.+||..||++|||++|++++-.-
T Consensus 231 ~~---~s~~~~~li~~~L~~dP~~Rps~~eil~hp~~ 264 (347)
T 3zgw_A 231 KW---LSPSSILLLQQMLQVDPKKRISMKNLLNHPWI 264 (347)
T ss_dssp TT---CCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHH
T ss_pred CC---CCHHHHHHHHHHcccCHhHCcCHHHHhcCcch
Confidence 11 12345678889999999999999999986443
No 41
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=3.5e-40 Score=359.10 Aligned_cols=248 Identities=25% Similarity=0.397 Sum_probs=206.6
Q ss_pred hcccCcCCceeEEEEEecC-CcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCCH
Q 006886 339 AEVLGKGSYGSTYKAILED-GTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 417 (627)
.+.||+|+||.||+|.++. +..||||.++......++|.+|++++.++ +||||+++++++...+..++||||+++|+|
T Consensus 225 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~E~~~~g~L 303 (495)
T 1opk_A 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNL 303 (495)
T ss_dssp EEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred eeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhc-CCCCEeeEEEEEecCCcEEEEEEccCCCCH
Confidence 4789999999999999874 88999999987666788999999999999 999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-----
Q 006886 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT----- 492 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~~----- 492 (627)
.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 304 ~~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~ 377 (495)
T 1opk_A 304 LDYLRECN---RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 377 (495)
T ss_dssp HHHHHHSC---TTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCT
T ss_pred HHHHHhcC---cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceeccCCceeecC
Confidence 99998643 245899999999999999999999998 9999999999999999999999999998764321
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006886 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
...+++.|+|||++.+..++.++||||||+++|||++ |+.||...... .+... +....... ..
T Consensus 378 ~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~---~~~~~----~~~~~~~~-------~~-- 441 (495)
T 1opk_A 378 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---QVYEL----LEKDYRME-------RP-- 441 (495)
T ss_dssp TCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GHHHH----HHTTCCCC-------CC--
T ss_pred CCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH---HHHHH----HHcCCCCC-------CC--
Confidence 2234678999999988889999999999999999999 99999764322 11111 11111100 01
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006886 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~ 610 (627)
......+.+++.+||+.+|++|||+.++++.|+.+.+.
T Consensus 442 -~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 442 -EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp -TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred -CCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 11224567788899999999999999999999998644
No 42
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.7e-39 Score=342.61 Aligned_cols=254 Identities=27% Similarity=0.381 Sum_probs=205.4
Q ss_pred hcccCcCCceeEEEEEec--------CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEE
Q 006886 339 AEVLGKGSYGSTYKAILE--------DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~--------~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv 408 (627)
.+.||+|+||.||+|+.. .+..||||+++.... ..+.+.+|++++.++.+||||+++++++...+..++|
T Consensus 74 ~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv 153 (382)
T 3tt0_A 74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVI 153 (382)
T ss_dssp EEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEE
Confidence 478999999999999853 235799999976532 3367889999999998999999999999999999999
Q ss_pred EecCCCCCHHHHhhhcCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCe
Q 006886 409 YSYMPAGSLFMLLHRNRSD-----------GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG 477 (627)
Q Consensus 409 ~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ 477 (627)
|||+++|+|.+++...... ....+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+
T Consensus 154 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~ 230 (382)
T 3tt0_A 154 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVM 230 (382)
T ss_dssp EECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCE
T ss_pred EEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEEEcCCCcE
Confidence 9999999999999865421 1245899999999999999999999998 9999999999999999999
Q ss_pred EEeecccccccCCC------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHH
Q 006886 478 CISDVGLAHLINFP------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVR 550 (627)
Q Consensus 478 ki~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~ 550 (627)
||+|||+++..... ....+|+.|+|||++.+..++.++||||||+++|||++ |+.||.... ......
T Consensus 231 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~------~~~~~~ 304 (382)
T 3tt0_A 231 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------VEELFK 304 (382)
T ss_dssp EECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------HHHHHH
T ss_pred EEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHH
Confidence 99999999876432 22335778999999999999999999999999999999 999997542 122222
Q ss_pred HHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006886 551 SVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 551 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~~ 612 (627)
.+. ....... . .....++.+++.+||+.+|++|||+.|+++.|+.+.....
T Consensus 305 ~~~-~~~~~~~-------~---~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 355 (382)
T 3tt0_A 305 LLK-EGHRMDK-------P---SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 355 (382)
T ss_dssp HHH-TTCCCCC-------C---SSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred HHH-cCCCCCC-------C---ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence 211 1111100 0 1122356778889999999999999999999999875543
No 43
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.7e-40 Score=339.44 Aligned_cols=258 Identities=25% Similarity=0.385 Sum_probs=196.5
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHHHh-ccCCCeeeeeeEEeeC----CceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTI-GKHSNVVPVRAYYYSK----DEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l-~~h~niv~l~~~~~~~----~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.+ ++.||||++... ....+..|.+++... .+||||+++++++... ...++||||++
T Consensus 42 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 118 (337)
T 3mdy_A 42 VKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT--EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHE 118 (337)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEEEGG--GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCT
T ss_pred EeEeecCCCeEEEEEEEC-CceEEEEEEecc--ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccC
Confidence 578999999999999986 899999998643 334455555555443 2899999999999887 67899999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEG-----GAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~ 488 (627)
+|+|.++++.. .+++..++.++.|++.||.|||+.+ .+.|+||||||+|||++.++.+||+|||+++..
T Consensus 119 ~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 192 (337)
T 3mdy_A 119 NGSLYDYLKST------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKF 192 (337)
T ss_dssp TCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred CCcHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceee
Confidence 99999999753 4899999999999999999999981 112999999999999999999999999999765
Q ss_pred CCC--------CCCCCCccccCccccCCCCCCCc------chhHHHHHHHHHHHhC----------CCCCCCCCCCCCCC
Q 006886 489 NFP--------TTATRTIGYRAPEVTETRKASQK------SDVYSFGVLLLEMLTG----------KAPLQHSGHDDVVD 544 (627)
Q Consensus 489 ~~~--------~~~~~t~~y~aPE~~~~~~~~~~------~Dv~S~Gvvl~el~tg----------~~p~~~~~~~~~~~ 544 (627)
... ....||+.|+|||++.+..+..+ +|||||||++|||++| +.||........ .
T Consensus 193 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~-~ 271 (337)
T 3mdy_A 193 ISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDP-S 271 (337)
T ss_dssp C---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC-C
T ss_pred ccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCC-c
Confidence 332 23468999999999987766665 9999999999999999 566654322211 1
Q ss_pred HHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006886 545 LPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~ 611 (627)
.. ..............+. ......+...++.+++.+||+.||++|||+.|++++|+.+.+..
T Consensus 272 ~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 272 YE-DMREIVCIKKLRPSFP----NRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp HH-HHHHHHTTSCCCCCCC----GGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred hh-hhHHHHhhhccCcccc----ccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 11 1111111111111111 11112356677889999999999999999999999999987653
No 44
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=9.6e-41 Score=351.34 Aligned_cols=246 Identities=24% Similarity=0.378 Sum_probs=201.0
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|.++ +++.||||.++.... ..+.|.+|++++..+ +||||+++++++...+..++||||+++|
T Consensus 119 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~g 197 (377)
T 3cbl_A 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIYIVMELVQGG 197 (377)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTC-CCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred eeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEecCCCcEEEEEcCCCC
Confidence 478999999999999986 689999999875422 234688999999999 9999999999999999999999999999
Q ss_pred CHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC---
Q 006886 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT--- 492 (627)
Q Consensus 416 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~~--- 492 (627)
+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 198 ~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~ 270 (377)
T 3cbl_A 198 DFLTFLRTEG----ARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAA 270 (377)
T ss_dssp BHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEEC
T ss_pred CHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceecCCCceee
Confidence 9999998642 35899999999999999999999998 9999999999999999999999999998654321
Q ss_pred ---CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006886 493 ---TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 493 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
...+++.|+|||++.+..++.++||||||+++|||++ |+.||...... .+........... .
T Consensus 271 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~-------~~~~~~~~~~~~~-------~ 336 (377)
T 3cbl_A 271 SGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ-------QTREFVEKGGRLP-------C 336 (377)
T ss_dssp CSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH-------HHHHHHHTTCCCC-------C
T ss_pred cCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHcCCCCC-------C
Confidence 1224667999999988889999999999999999998 99999754211 1111111111000 0
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006886 569 YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~ 609 (627)
. ......+.+++.+||+.+|++|||+.++++.|+++..
T Consensus 337 ~---~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 337 P---ELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp C---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred C---CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 1 1122356778889999999999999999999999865
No 45
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=8.6e-40 Score=332.56 Aligned_cols=253 Identities=15% Similarity=0.174 Sum_probs=203.2
Q ss_pred hcccCcCCceeEEEEEe-cCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCCH
Q 006886 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 417 (627)
.+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|++++..+.+|+|++++++++......++||||+ +++|
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L 92 (298)
T 1csn_A 15 GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSL 92 (298)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCH
Confidence 47899999999999996 478999999986432 33467889999999989999999999999999999999999 9999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC-----eEEeecccccccCCC-
Q 006886 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN-----GCISDVGLAHLINFP- 491 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~-----~ki~DfG~a~~~~~~- 491 (627)
.+++.... ..+++..++.++.|++.||.|||+.+ |+||||||+||+++.++. +||+|||+++.....
T Consensus 93 ~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~ 165 (298)
T 1csn_A 93 EDLLDLCG----RKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV 165 (298)
T ss_dssp HHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred HHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccc
Confidence 99998642 35899999999999999999999998 999999999999987776 999999999876432
Q ss_pred ----------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccc
Q 006886 492 ----------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEV 561 (627)
Q Consensus 492 ----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (627)
....||+.|+|||++.+..++.++||||||+++|||++|+.||......... ..............
T Consensus 166 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~---~~~~~~~~~~~~~~- 241 (298)
T 1csn_A 166 TKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNK---QKYERIGEKKQSTP- 241 (298)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHH---HHHHHHHHHHHHSC-
T ss_pred ccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccH---HHHHHHHhhccCcc-
Confidence 2335789999999999999999999999999999999999999865433221 11111111110000
Q ss_pred cchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006886 562 FDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 562 ~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~ 610 (627)
.... ... ....+.+++.+||+.+|++||++++|++.|+++...
T Consensus 242 -~~~~--~~~---~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~ 284 (298)
T 1csn_A 242 -LREL--CAG---FPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 284 (298)
T ss_dssp -HHHH--TTT---SCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred -HHHH--Hhh---CcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence 0000 011 123567788899999999999999999999998754
No 46
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.1e-40 Score=345.17 Aligned_cols=251 Identities=24% Similarity=0.350 Sum_probs=201.5
Q ss_pred hcccCcCCceeEEEEEec------CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEe
Q 006886 339 AEVLGKGSYGSTYKAILE------DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|.+. ++..||||+++... .....+.+|+.++..+ +||||+++++++......++|||
T Consensus 76 ~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e 154 (367)
T 3l9p_A 76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIGVSLQSLPRFILLE 154 (367)
T ss_dssp EEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCCCEEEEE
Confidence 478999999999999953 46689999986542 2345788999999999 99999999999999999999999
Q ss_pred cCCCCCHHHHhhhcCCC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC---CeEEeecccc
Q 006886 411 YMPAGSLFMLLHRNRSD--GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL---NGCISDVGLA 485 (627)
Q Consensus 411 ~~~~g~L~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~---~~ki~DfG~a 485 (627)
|+++|+|.+++...+.. ....+++..++.++.|++.||.|||+.+ |+||||||+|||++.++ .+||+|||++
T Consensus 155 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~DFG~a 231 (367)
T 3l9p_A 155 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 231 (367)
T ss_dssp CCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECCCHHH
T ss_pred eCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEECCCccc
Confidence 99999999999875421 2245899999999999999999999998 99999999999999554 5999999999
Q ss_pred cccC------CCCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006886 486 HLIN------FPTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 486 ~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
+... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... ......+......
T Consensus 232 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~------~~~~~~i~~~~~~ 305 (367)
T 3l9p_A 232 RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN------QEVLEFVTSGGRM 305 (367)
T ss_dssp HHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH------HHHHHHHHTTCCC
T ss_pred cccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHcCCCC
Confidence 7542 1223446889999999988899999999999999999998 9999975421 1222222211110
Q ss_pred ccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006886 559 AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 559 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~ 610 (627)
. ........+.+++.+||+.+|++|||+.++++.|+.+.+.
T Consensus 306 -~----------~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 306 -D----------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp -C----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -C----------CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 0 0011223567788899999999999999999999998654
No 47
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.6e-40 Score=339.06 Aligned_cols=245 Identities=18% Similarity=0.337 Sum_probs=200.4
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCCH
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 417 (627)
.+.||+|+||.||++..+ +++.||+|.+.........+.+|++++..+ +||||+++++++.+.+..++||||+++|+|
T Consensus 10 ~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L 88 (321)
T 1tki_A 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIA-RHRNILHLHESFESMEELVMIFEFISGLDI 88 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHS-CCTTBCCEEEEEEETTEEEEEECCCCCCBH
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhC-CCCCCCeEeEEEecCCEEEEEEEeCCCCCH
Confidence 478999999999999976 588999999876555566788999999999 999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC--CCCeEEeecccccccCCCC---
Q 006886 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ--DLNGCISDVGLAHLINFPT--- 492 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~--~~~~ki~DfG~a~~~~~~~--- 492 (627)
.+++... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++. ++.+||+|||+++......
T Consensus 89 ~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 161 (321)
T 1tki_A 89 FERINTS----AFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFR 161 (321)
T ss_dssp HHHHTSS----SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEE
T ss_pred HHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccc
Confidence 9999753 235899999999999999999999998 999999999999997 7899999999998775433
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006886 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
...+|+.|+|||++.+..++.++||||||+++|||++|+.||..... ......+...... ++... ..
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~~~~~---~~~~~--~~-- 228 (321)
T 1tki_A 162 LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN------QQIIENIMNAEYT---FDEEA--FK-- 228 (321)
T ss_dssp EEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHHTCCC---CCHHH--HT--
T ss_pred cccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH------HHHHHHHHcCCCC---CChhh--hc--
Confidence 23478999999999988899999999999999999999999975321 2222222222111 11100 01
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 006886 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~ 605 (627)
....++.+++.+|+..||++|||+.|++++-.
T Consensus 229 -~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~ 260 (321)
T 1tki_A 229 -EISIEAMDFVDRLLVKERKSRMTASEALQHPW 260 (321)
T ss_dssp -TSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred -cCCHHHHHHHHHHcCCChhHCcCHHHHhcChh
Confidence 11235677888999999999999999998543
No 48
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=6.7e-40 Score=353.04 Aligned_cols=248 Identities=26% Similarity=0.414 Sum_probs=201.2
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCCHH
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 418 (627)
.+.||+|+||.||+|.++++..||||+++......++|.+|++++.++ +||||+++++++.+ +..++||||+++|+|.
T Consensus 189 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~ 266 (452)
T 1fmk_A 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 266 (452)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEEEECCCTTCBHH
T ss_pred eeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhC-CCCCEeeEEEEEcC-CceEEEehhhcCCCHH
Confidence 478999999999999998888899999987666778899999999999 99999999999876 6789999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-----C
Q 006886 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-----T 493 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~~-----~ 493 (627)
+++.... +..+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 267 ~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 340 (452)
T 1fmk_A 267 DFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 340 (452)
T ss_dssp HHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred HHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecCCCceecccC
Confidence 9997532 235899999999999999999999998 9999999999999999999999999998764321 2
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006886 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
..++..|+|||++.+..++.++||||||+++|||++ |+.||..... ......+.... .. ...
T Consensus 341 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~------~~~~~~i~~~~-~~----------~~~ 403 (452)
T 1fmk_A 341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN------REVLDQVERGY-RM----------PCP 403 (452)
T ss_dssp --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH------HHHHHHHHTTC-CC----------CCC
T ss_pred CcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHcCC-CC----------CCC
Confidence 235678999999988899999999999999999999 9999975421 11122211111 00 001
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006886 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~ 611 (627)
......+.+++.+||+.+|++|||++++++.|+.+....
T Consensus 404 ~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 404 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 122345677888999999999999999999999986543
No 49
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.8e-39 Score=341.76 Aligned_cols=245 Identities=20% Similarity=0.305 Sum_probs=195.1
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccccC----HHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAAT----KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+++.+ +++.||+|+++..... .+.+..|..++.++.+||||+++++++.+.+..++||||++
T Consensus 57 ~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~ 136 (396)
T 4dc2_A 57 LRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 136 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCC
Confidence 478999999999999976 5788999999765322 23578889999888799999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC---
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF--- 490 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~--- 490 (627)
+|+|..++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 137 gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~ 208 (396)
T 4dc2_A 137 GGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD 208 (396)
T ss_dssp TCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeeecccCCC
Confidence 99999999865 35899999999999999999999998 99999999999999999999999999986322
Q ss_pred -CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCC--CCHHHHHHHHhhhcccccccchhhh
Q 006886 491 -PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDV--VDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 491 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
..+..||+.|+|||++.+..++.++|||||||++|||++|+.||......+. .................
T Consensus 209 ~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~-------- 280 (396)
T 4dc2_A 209 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR-------- 280 (396)
T ss_dssp CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCC--------
T ss_pred ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccC--------
Confidence 2345689999999999999999999999999999999999999975432211 11111121111111110
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 006886 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKM------DDVVR 602 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~------~ev~~ 602 (627)
-.... ..++.+++.+||+.||++||++ +|+++
T Consensus 281 ~p~~~---s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~ 318 (396)
T 4dc2_A 281 IPRSL---SVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 318 (396)
T ss_dssp CCTTS---CHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred CCCcC---CHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence 01111 2345678889999999999996 56655
No 50
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.8e-39 Score=335.48 Aligned_cols=238 Identities=22% Similarity=0.319 Sum_probs=197.3
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccc----ccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV----AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~----~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+++.+ +|+.||+|+++.. ....+.+.+|++++..+ +||||+++++++...+..++||||++
T Consensus 10 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~lv~E~~~ 88 (337)
T 1o6l_A 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCFVMEYAN 88 (337)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhC-CCCcCcceEEEEEeCCEEEEEEeCCC
Confidence 478999999999999976 6899999999753 23456788999999999 89999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC---
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF--- 490 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~--- 490 (627)
+|+|..++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 89 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 160 (337)
T 1o6l_A 89 GGELFFHLSRE-----RVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp TCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhcccCCC
Confidence 99999999764 35899999999999999999999998 99999999999999999999999999986432
Q ss_pred -CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006886 491 -PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 491 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
..+..||+.|+|||++.+..++.++||||||+++|||++|+.||.... .......+...... + .
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~------~~~~~~~i~~~~~~---~------p 225 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HERLFELILMEEIR---F------P 225 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCC---C------C
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC------HHHHHHHHHcCCCC---C------C
Confidence 234458999999999999999999999999999999999999997532 12222222221110 0 0
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 006886 570 QDVEEEMVQMLQIALSCVAKVPDSRP-----KMDDVVRM 603 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~p~~RP-----s~~ev~~~ 603 (627)
...+ .++.+++.+||+.||++|| +++|++++
T Consensus 226 ~~~s---~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 226 RTLS---PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp TTSC---HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CCCC---HHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 1112 3456778899999999999 89999874
No 51
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.6e-40 Score=347.49 Aligned_cols=253 Identities=26% Similarity=0.372 Sum_probs=201.4
Q ss_pred hcccCcCCceeEEEEEec------CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCc-eEEEE
Q 006886 339 AEVLGKGSYGSTYKAILE------DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDE-KLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~-~~lv~ 409 (627)
.+.||+|+||.||+|++. +++.||||+++.... ..+.+.+|++++.++.+||||+++++++.+.+. .++||
T Consensus 27 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~ 106 (359)
T 3vhe_A 27 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 106 (359)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEE
T ss_pred ceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEE
Confidence 478999999999999842 457899999976432 345789999999999889999999999987654 88999
Q ss_pred ecCCCCCHHHHhhhcCCCC-------------------------------------------------------------
Q 006886 410 SYMPAGSLFMLLHRNRSDG------------------------------------------------------------- 428 (627)
Q Consensus 410 e~~~~g~L~~~l~~~~~~~------------------------------------------------------------- 428 (627)
||+++|+|.++++......
T Consensus 107 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (359)
T 3vhe_A 107 EFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLY 186 (359)
T ss_dssp ECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------CTT
T ss_pred EecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchh
Confidence 9999999999998653210
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC------CCCCCCccccC
Q 006886 429 GTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP------TTATRTIGYRA 502 (627)
Q Consensus 429 ~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~------~~~~~t~~y~a 502 (627)
...+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ....+|+.|+|
T Consensus 187 ~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~a 263 (359)
T 3vhe_A 187 KDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 263 (359)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCC
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEC
Confidence 122899999999999999999999998 999999999999999999999999999866332 22346788999
Q ss_pred ccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHH
Q 006886 503 PEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQ 581 (627)
Q Consensus 503 PE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~ 581 (627)
||++.+..++.++||||||+++|||++ |+.||......+ .+............ . .....++.+
T Consensus 264 PE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~~~~~~~~~~~~-------~---~~~~~~l~~ 327 (359)
T 3vhe_A 264 PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFCRRLKEGTRMRA-------P---DYTTPEMYQ 327 (359)
T ss_dssp HHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH------HHHHHHHHTCCCCC-------C---TTCCHHHHH
T ss_pred hhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH------HHHHHHHcCCCCCC-------C---CCCCHHHHH
Confidence 999988899999999999999999998 999997643221 11111111111110 0 111235677
Q ss_pred HHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006886 582 IALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 582 l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~ 610 (627)
++.+||+.+|++|||+.|++++|+++.+.
T Consensus 328 li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 328 TMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 88899999999999999999999998654
No 52
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=8.3e-40 Score=335.01 Aligned_cols=252 Identities=25% Similarity=0.343 Sum_probs=194.7
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCC
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||+||+|+.++++.||+|++..... ..+.+.+|++++.++ +||||+++++++.+.+..++||||+++
T Consensus 26 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~- 103 (311)
T 3niz_A 26 LEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKEL-HHPNIVSLIDVIHSERCLTLVFEFMEK- 103 (311)
T ss_dssp EEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHC-CCTTBCCEEEEECCSSCEEEEEECCSE-
T ss_pred hhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHc-CCCCEeeeeeEEccCCEEEEEEcCCCC-
Confidence 478999999999999998899999999875432 236788999999999 999999999999999999999999975
Q ss_pred CHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----
Q 006886 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491 (627)
Q Consensus 416 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~---- 491 (627)
+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 104 ~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 176 (311)
T 3niz_A 104 DLKKVLDENK----TGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY 176 (311)
T ss_dssp EHHHHHHTCT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC--
T ss_pred CHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCCCcccc
Confidence 8888887542 35899999999999999999999998 999999999999999999999999999876432
Q ss_pred CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccccc---chh--
Q 006886 492 TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF---DVE-- 565 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---d~~-- 565 (627)
....+|+.|+|||++.+ ..++.++||||||+++|||++|+.||......+ ....+............. +..
T Consensus 177 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~ 253 (311)
T 3niz_A 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD---QLPKIFSILGTPNPREWPQVQELPLW 253 (311)
T ss_dssp -CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT---HHHHHHHHHCCCCTTTSGGGTTSHHH
T ss_pred cCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHHCCCChHHhhhhhccchh
Confidence 23457899999999876 568999999999999999999999998654332 112221111111100000 000
Q ss_pred ----hh--cCCCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006886 566 ----LL--KYQDV----EEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 566 ----l~--~~~~~----~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~ 602 (627)
.. ..... +....++.+++.+|++.||++|||++|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00 00000 011235678888999999999999999976
No 53
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=3.3e-40 Score=330.90 Aligned_cols=245 Identities=27% Similarity=0.406 Sum_probs=189.9
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEecccc-----cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVA-----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~-----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|... ++.||||+++... ...+.+.+|++++..+ +||||+++++++...+..++||||++
T Consensus 12 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (271)
T 3dtc_A 12 EEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAML-KHPNIIALRGVCLKEPNLCLVMEFAR 89 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHC-CCTTBCCEEEEECCC--CEEEEECCT
T ss_pred eeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhc-CCCCEeeEEEEEecCCceEEEEEcCC
Confidence 478999999999999986 8899999986542 2346789999999999 89999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC--------CCCeEEeecccc
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ--------DLNGCISDVGLA 485 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~--------~~~~ki~DfG~a 485 (627)
+++|.+++.. ..+++..++.++.|++.||.|||+.+..+|+||||||+||+++. ++.+||+|||++
T Consensus 90 ~~~L~~~~~~------~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~ 163 (271)
T 3dtc_A 90 GGPLNRVLSG------KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163 (271)
T ss_dssp TEEHHHHHTS------SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-
T ss_pred CCCHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcc
Confidence 9999999863 35899999999999999999999998556999999999999986 778999999999
Q ss_pred cccCCC--CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006886 486 HLINFP--TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 486 ~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
+..... ....+++.|+|||++.+..++.++||||||+++|||++|+.||..... ...............
T Consensus 164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~--- 234 (271)
T 3dtc_A 164 REWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG------LAVAYGVAMNKLALP--- 234 (271)
T ss_dssp ------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCH------HHHHHHHHTSCCCCC---
T ss_pred cccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHhhhcCCCCCC---
Confidence 866433 234578999999999888999999999999999999999999975321 111111111111100
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006886 564 VELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~ 607 (627)
........+.+++.+||+.+|++|||+.|++++|+++
T Consensus 235 -------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 235 -------IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp -------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred -------CCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 0111223567788899999999999999999999864
No 54
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=5.9e-40 Score=338.13 Aligned_cols=246 Identities=20% Similarity=0.337 Sum_probs=180.0
Q ss_pred cccCcCCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCCHH
Q 006886 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 418 (627)
+.||+|+||.||++..+ +++.||||++... ....+.+|++++..+.+||||+++++++.+....++||||+++|+|.
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 94 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELF 94 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHH
Confidence 67999999999999975 6899999998643 45678899999999966999999999999999999999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC---CeEEeecccccccCCC----
Q 006886 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL---NGCISDVGLAHLINFP---- 491 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~---~~ki~DfG~a~~~~~~---- 491 (627)
+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++ .+||+|||+++.....
T Consensus 95 ~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 166 (325)
T 3kn6_A 95 ERIKKK-----KHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPL 166 (325)
T ss_dssp HHHHHC-----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----
T ss_pred HHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcc
Confidence 999864 35899999999999999999999998 99999999999998765 7999999999866432
Q ss_pred CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCC-CCHHHHHHHHhhhcccccccchhhhcCC
Q 006886 492 TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDV-VDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
....+|+.|+|||++.+..++.++||||||+++|||++|+.||........ .........+...... +...
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~----- 238 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFS---FEGE----- 238 (325)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCC---CCSH-----
T ss_pred cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCC---CCcc-----
Confidence 234578999999999999999999999999999999999999986543221 1222222222211110 0000
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 571 DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
.......++.+++.+||..||++|||+.|++++
T Consensus 239 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 239 AWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred cccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 001123456778889999999999999999653
No 55
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1e-39 Score=340.48 Aligned_cols=241 Identities=19% Similarity=0.358 Sum_probs=197.8
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc-------CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEe
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA-------TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+++.+ +|+.||+|++..... ..+.+.+|++++..+ +||||+++++++.+.+..++|||
T Consensus 17 ~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lv~e 95 (361)
T 2yab_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQV-LHPNIITLHDVYENRTDVVLILE 95 (361)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEE
T ss_pred eeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhC-CCcCCCcEEEEEEeCCEEEEEEE
Confidence 478999999999999976 689999999875432 357899999999999 89999999999999999999999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC----CeEEeeccccc
Q 006886 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL----NGCISDVGLAH 486 (627)
Q Consensus 411 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~----~~ki~DfG~a~ 486 (627)
|+++|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++ .+||+|||+++
T Consensus 96 ~~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a~ 167 (361)
T 2yab_A 96 LVSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (361)
T ss_dssp CCCSCBHHHHHTTC-----SCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCSSCE
T ss_pred cCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEecCCce
Confidence 99999999999753 35899999999999999999999998 99999999999998877 79999999998
Q ss_pred ccCCC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006886 487 LINFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 487 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
..... ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+... ......+..... .++
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~------~~~~~~i~~~~~---~~~ 238 (361)
T 2yab_A 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK------QETLANITAVSY---DFD 238 (361)
T ss_dssp ECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHHTTCC---CCC
T ss_pred EcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhcCC---CCC
Confidence 76543 345689999999999998999999999999999999999999975321 122222221111 011
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006886 564 VELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~ 602 (627)
... .... ...+.+++.+||..||++|||+.|+++
T Consensus 239 ~~~--~~~~---s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 239 EEF--FSQT---SELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HHH--HTTS---CHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred chh--ccCC---CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111 0111 234567888999999999999999986
No 56
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=4.6e-40 Score=339.44 Aligned_cols=246 Identities=22% Similarity=0.404 Sum_probs=195.2
Q ss_pred hcccCcCCceeEEEEEec-CCc----EEEEEEecccc--cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEec
Q 006886 339 AEVLGKGSYGSTYKAILE-DGT----TVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~----~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||.||+|++. +++ .||+|.+.... ...+++.+|++++.++ +||||+++++++... ..++|+||
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~-~~~~v~e~ 97 (327)
T 3poz_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTS-TVQLITQL 97 (327)
T ss_dssp EEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHC-CBTTBCCEEEEEESS-SEEEEEEC
T ss_pred ceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEecC-CeEEEEEe
Confidence 478999999999999964 344 35888875432 3567899999999999 999999999999875 47799999
Q ss_pred CCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC
Q 006886 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 412 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~ 491 (627)
+++|+|.+++.... ..+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 98 ~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 170 (327)
T 3poz_A 98 MPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp CTTCBHHHHHHHST----TSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred cCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence 99999999998653 35899999999999999999999998 999999999999999999999999999876432
Q ss_pred C------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006886 492 T------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 492 ~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
. ...+|+.|+|||++.+..++.++||||||+++|||++ |+.||....... +.. .......
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~----~~~~~~~------ 237 (327)
T 3poz_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISS----ILEKGER------ 237 (327)
T ss_dssp CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHH----HHHTTCC------
T ss_pred cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH---HHH----HHHcCCC------
Confidence 2 2235778999999999999999999999999999999 999997643221 111 1111110
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006886 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~ 610 (627)
..........+.+++.+||+.+|++||++.|++++|+.+...
T Consensus 238 ----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 238 ----LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp ----CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred ----CCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 001112234577888899999999999999999999998654
No 57
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.8e-39 Score=330.63 Aligned_cols=264 Identities=17% Similarity=0.260 Sum_probs=206.3
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCC--ceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD--EKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~--~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|++++.++ +||||+++++++.... ..++||||++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (319)
T 4euu_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKNIVKLFAIEEETTTRHKVLIMEFCP 92 (319)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECTTTCCEEEEEECCT
T ss_pred EEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCCcceEEEEeecCCCceEEEEEeCCC
Confidence 478999999999999976 48999999997543 3467788999999999 8999999999988765 6789999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe----cCCCCeEEeecccccccC
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL----TQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl----~~~~~~ki~DfG~a~~~~ 489 (627)
+|+|.+++..... ...+++..++.++.|++.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++...
T Consensus 93 ~~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~ 167 (319)
T 4euu_A 93 CGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (319)
T ss_dssp TCBHHHHHHSGGG--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTCEECC
T ss_pred CCCHHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCceecC
Confidence 9999999986532 234899999999999999999999998 9999999999999 788889999999998765
Q ss_pred CCC---CCCCCccccCccccC--------CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006886 490 FPT---TATRTIGYRAPEVTE--------TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 490 ~~~---~~~~t~~y~aPE~~~--------~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
... ...+|+.|+|||++. +..++.++||||||+++|||++|+.||....... ........+......
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~p~ 245 (319)
T 4euu_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR--RNKEVMYKIITGKPS 245 (319)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGG--GCHHHHHHHHHHCCT
T ss_pred CCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccc--hhHHHHHHHhcCCCc
Confidence 432 345889999999875 5678999999999999999999999997543221 112222222222111
Q ss_pred c---cc-------c--chhhh-cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006886 559 A---EV-------F--DVELL-KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 559 ~---~~-------~--d~~l~-~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~ 610 (627)
. .. + ...+. ...........+.+++.+||+.||++|||++|++++..+-...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~ 310 (319)
T 4euu_A 246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (319)
T ss_dssp TCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC-
T ss_pred ccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhc
Confidence 0 00 0 00000 1112245556778899999999999999999999998876543
No 58
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=3.6e-40 Score=335.01 Aligned_cols=254 Identities=23% Similarity=0.401 Sum_probs=196.8
Q ss_pred hcccCcCCceeEEEEEe-----cCCcEEEEEEeccccc-CHHHHHHHHHHHHHhccCCCeeeeeeEEeeC--CceEEEEe
Q 006886 339 AEVLGKGSYGSTYKAIL-----EDGTTVVVKRLREVAA-TKREFEQQMEVVGTIGKHSNVVPVRAYYYSK--DEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-----~~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--~~~~lv~e 410 (627)
.+.||+|+||.||++++ .+++.||||++..... ..+.+.+|++++.++ +||||+++++++... ...++|||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e 93 (295)
T 3ugc_A 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGRRNLKLIME 93 (295)
T ss_dssp EEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECHHHHTSCEEEEE
T ss_pred hheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCCCceEEEEE
Confidence 47899999999999984 2588999999875432 346789999999999 899999999998653 45899999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC
Q 006886 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF 490 (627)
Q Consensus 411 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~ 490 (627)
|+++|+|.+++.... ..+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 94 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (295)
T 3ugc_A 94 YLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166 (295)
T ss_dssp CCTTCBHHHHHHHCG----GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSCC----
T ss_pred eCCCCCHHHHHHhcc----cccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCcccccccC
Confidence 999999999998653 35899999999999999999999998 99999999999999999999999999987643
Q ss_pred CC-------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCC--------CCC-CHHHHHHHHhh
Q 006886 491 PT-------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHD--------DVV-DLPRWVRSVVR 554 (627)
Q Consensus 491 ~~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~--------~~~-~~~~~~~~~~~ 554 (627)
.. ...++..|+|||++.+..++.++||||||+++|||++|..|+...... ... ...........
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (295)
T 3ugc_A 167 DKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 246 (295)
T ss_dssp ---------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred CcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHh
Confidence 21 223566799999999889999999999999999999999998642100 000 00000001111
Q ss_pred hcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006886 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 555 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~ 610 (627)
... ..........++.+++.+||+.+|++|||+.|+++.|+++...
T Consensus 247 ~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 247 NNG----------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp TTC----------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ccC----------cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 100 0011122234677788899999999999999999999998653
No 59
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.5e-39 Score=328.76 Aligned_cols=252 Identities=19% Similarity=0.295 Sum_probs=200.6
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+++.. +++.||+|++..... ..+.+.+|++++..+ +||||+++++++...+..++||||++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 94 (294)
T 4eqm_A 16 VDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL-SHQNIVSMIDVDEEDDCYYLVMEYIE 94 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTC-CBTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcC-CCCCCceEEEeeeeCCeEEEEEeCCC
Confidence 478999999999999965 688999999854322 245788999999999 99999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|.+++... ..+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 95 g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 166 (294)
T 4eqm_A 95 GPTLSEYIESH-----GPLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL 166 (294)
T ss_dssp SCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCccccccccc
Confidence 99999999865 25899999999999999999999998 999999999999999999999999999876432
Q ss_pred ---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006886 492 ---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 492 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
....||+.|+|||++.+..++.++||||||+++|||++|+.||..... ............. ......
T Consensus 167 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~------~~~~~~~~~~~~~----~~~~~~ 236 (294)
T 4eqm_A 167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA------VSIAIKHIQDSVP----NVTTDV 236 (294)
T ss_dssp --------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH------HHHHHHHHSSCCC----CHHHHS
T ss_pred cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHhhccCC----Ccchhc
Confidence 223579999999999999999999999999999999999999975421 1111111111110 100001
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHhhccccc
Q 006886 569 YQDVEEEMVQMLQIALSCVAKVPDSRP-KMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~p~~RP-s~~ev~~~L~~~~~~~~ 612 (627)
.... ...+.+++.+|++.||++|| +++++.+.|+.+.....
T Consensus 237 ~~~~---~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~ 278 (294)
T 4eqm_A 237 RKDI---PQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENR 278 (294)
T ss_dssp CTTS---CHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSS
T ss_pred ccCC---CHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhcc
Confidence 1112 23566788899999999998 99999999998865543
No 60
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.7e-40 Score=337.10 Aligned_cols=242 Identities=21% Similarity=0.374 Sum_probs=197.8
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc-------CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEe
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA-------TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||++..+ +++.||+|++..... ..+.+.+|++++..+ +||||+++++++...+..++|||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e 94 (326)
T 2y0a_A 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QHPNVITLHEVYENKTDVILILE 94 (326)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEE
T ss_pred ceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEEE
Confidence 578999999999999976 589999999865421 367899999999999 89999999999999999999999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC----CeEEeeccccc
Q 006886 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL----NGCISDVGLAH 486 (627)
Q Consensus 411 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~----~~ki~DfG~a~ 486 (627)
|+++|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++ .+||+|||+++
T Consensus 95 ~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 95 LVAGGELFDFLAEK-----ESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp CCCSCBHHHHHTTS-----SCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred cCCCCCHHHHHHhc-----CCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 99999999999753 35899999999999999999999998 99999999999999887 79999999998
Q ss_pred ccCCC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006886 487 LINFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 487 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
..... ....||+.|+|||++.+..++.++||||||+++|||++|+.||..... ......+..... .+.
T Consensus 167 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~~~~~~~---~~~ 237 (326)
T 2y0a_A 167 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK------QETLANVSAVNY---EFE 237 (326)
T ss_dssp ECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHHHTCC---CCC
T ss_pred ECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH------HHHHHHHHhcCC---CcC
Confidence 76432 344589999999999999999999999999999999999999975321 111111111110 011
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 564 VELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
.... . .....+.+++.+||..||++|||+.|++++
T Consensus 238 ~~~~--~---~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 238 DEYF--S---NTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp HHHH--T---TSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred cccc--c---cCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1100 1 112356678889999999999999999874
No 61
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2e-39 Score=328.13 Aligned_cols=247 Identities=21% Similarity=0.440 Sum_probs=196.1
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc--C------HHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEE
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA--T------KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~------~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~ 409 (627)
.+.||+|+||.||+|+.. +++.||+|++..... . .+.+.+|++++.++ +||||+++++++.+.. ++||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~--~lv~ 100 (287)
T 4f0f_A 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-NHPNIVKLYGLMHNPP--RMVM 100 (287)
T ss_dssp EEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTC-CCTTBCCEEEEETTTT--EEEE
T ss_pred hhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhC-CCCCchhhheeecCCC--eEEE
Confidence 478999999999999974 789999999864322 1 16789999999999 8999999999986554 6999
Q ss_pred ecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC-----eEEeeccc
Q 006886 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN-----GCISDVGL 484 (627)
Q Consensus 410 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~-----~ki~DfG~ 484 (627)
||+++|+|.+++... ...+++..++.++.|++.||.|||+.+ ++|+||||||+||+++.++. +||+|||+
T Consensus 101 e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~ 175 (287)
T 4f0f_A 101 EFVPCGDLYHRLLDK----AHPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL 175 (287)
T ss_dssp ECCTTCBHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEECCCTT
T ss_pred EecCCCCHHHHHhcc----cCCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeCCCCc
Confidence 999999999988754 246999999999999999999999986 56999999999999988876 99999999
Q ss_pred ccccCCC-CCCCCCccccCcccc--CCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccc
Q 006886 485 AHLINFP-TTATRTIGYRAPEVT--ETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEV 561 (627)
Q Consensus 485 a~~~~~~-~~~~~t~~y~aPE~~--~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (627)
++..... ....+|+.|+|||++ ....++.++||||||+++|||++|+.||....... ...............
T Consensus 176 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~- 250 (287)
T 4f0f_A 176 SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK----IKFINMIREEGLRPT- 250 (287)
T ss_dssp CBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH----HHHHHHHHHSCCCCC-
T ss_pred cccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH----HHHHHHHhccCCCCC-
Confidence 9865443 335688999999998 44567899999999999999999999997543321 111222111111111
Q ss_pred cchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhh
Q 006886 562 FDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQI 607 (627)
Q Consensus 562 ~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~ 607 (627)
+ .......+.+++.+||+.||++|||+.|+++.|+++
T Consensus 251 ~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 251 I---------PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp C---------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred C---------CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 1 011223567788899999999999999999999874
No 62
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=6e-40 Score=341.35 Aligned_cols=238 Identities=23% Similarity=0.324 Sum_probs=194.5
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccc----ccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV----AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~----~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.+ +++.||||+++.. ....+.+..|.+++..+.+||||+++++++.+.+..++||||++
T Consensus 28 ~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 107 (353)
T 3txo_A 28 IRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVN 107 (353)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCC
Confidence 478999999999999976 5899999999754 23456688899999988789999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC---
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF--- 490 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~--- 490 (627)
+|+|..++.... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 108 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~ 179 (353)
T 3txo_A 108 GGDLMFHIQKSR-----RFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV 179 (353)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceeecccCCc
Confidence 999999998653 5899999999999999999999998 99999999999999999999999999986432
Q ss_pred -CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006886 491 -PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 491 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
..+..||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+...... + .
T Consensus 180 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~------~~~~~~i~~~~~~---~------p 244 (353)
T 3txo_A 180 TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE------DDLFEAILNDEVV---Y------P 244 (353)
T ss_dssp ------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCC---C------C
T ss_pred cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH------HHHHHHHHcCCCC---C------C
Confidence 2345689999999999888899999999999999999999999975421 2222222222110 0 0
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 006886 570 QDVEEEMVQMLQIALSCVAKVPDSRPKM------DDVVR 602 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~------~ev~~ 602 (627)
.. ....+.+++.+|+..+|++||++ +|+++
T Consensus 245 ~~---~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 245 TW---LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp TT---SCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CC---CCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 11 12345678889999999999998 77765
No 63
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1e-39 Score=339.03 Aligned_cols=252 Identities=22% Similarity=0.389 Sum_probs=202.2
Q ss_pred hcccCcCCceeEEEEEec------CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEe
Q 006886 339 AEVLGKGSYGSTYKAILE------DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|+.. +++.||||+++.... ..+.+.+|++++..+ +||||+++++++...+..++|||
T Consensus 52 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e 130 (343)
T 1luf_A 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-DNPNIVKLLGVCAVGKPMCLLFE 130 (343)
T ss_dssp EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEccCCceEEEEe
Confidence 478999999999999975 347899999975432 346789999999999 99999999999999999999999
Q ss_pred cCCCCCHHHHhhhcCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe
Q 006886 411 YMPAGSLFMLLHRNRSD-------------------GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL 471 (627)
Q Consensus 411 ~~~~g~L~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl 471 (627)
|+++|+|.+++...... ....+++..++.++.|++.||.|||+.+ |+||||||+|||+
T Consensus 131 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~ 207 (343)
T 1luf_A 131 YMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLV 207 (343)
T ss_dssp CCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred cCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEE
Confidence 99999999999864311 1256899999999999999999999998 9999999999999
Q ss_pred cCCCCeEEeecccccccCC------CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCC
Q 006886 472 TQDLNGCISDVGLAHLINF------PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVD 544 (627)
Q Consensus 472 ~~~~~~ki~DfG~a~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~ 544 (627)
+.++.+||+|||+++.... .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||.....
T Consensus 208 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~----- 282 (343)
T 1luf_A 208 GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH----- 282 (343)
T ss_dssp CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-----
T ss_pred CCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh-----
Confidence 9999999999999876532 223446788999999988899999999999999999999 9999975321
Q ss_pred HHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006886 545 LPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~ 611 (627)
......+.... .... . ......+.+++.+||+.+|++||++.++++.|+++.+..
T Consensus 283 -~~~~~~~~~~~-~~~~-------~---~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 283 -EEVIYYVRDGN-ILAC-------P---ENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp -HHHHHHHHTTC-CCCC-------C---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred -HHHHHHHhCCC-cCCC-------C---CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 11122111111 1000 0 112235677888999999999999999999999987653
No 64
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=9.3e-40 Score=338.38 Aligned_cols=266 Identities=25% Similarity=0.373 Sum_probs=194.0
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHH--HhccCCCeeeeeeEEee-----CCceEEEEec
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVG--TIGKHSNVVPVRAYYYS-----KDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~--~l~~h~niv~l~~~~~~-----~~~~~lv~e~ 411 (627)
.+.||+|+||.||+|+. +++.||||++.... ...+..|.++.. .+ +||||+++++.+.. ....++||||
T Consensus 18 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~~-~h~~i~~~~~~~~~~~~~~~~~~~lv~e~ 93 (336)
T 3g2f_A 18 LELIGRGRYGAVYKGSL-DERPVAVKVFSFAN--RQNFINEKNIYRVPLM-EHDNIARFIVGDERVTADGRMEYLLVMEY 93 (336)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG--HHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECTTSCEEEEEEECC
T ss_pred eeecccCCCeEEEEEEE-CCeEEEEEEeeccc--hhhHHHHHHHHHHHhc-cCcchhhheecccccccCCCceEEEEEec
Confidence 47899999999999987 48999999986533 344455554443 35 99999999986543 2256899999
Q ss_pred CCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc---------CCCCeeecCCCCCCeEecCCCCeEEeec
Q 006886 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE---------GGAKFTHGNIKSSNVLLTQDLNGCISDV 482 (627)
Q Consensus 412 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~---------~~~~ivH~Dlk~~NILl~~~~~~ki~Df 482 (627)
+++|+|.+++... ..++..++.++.|++.||.|||+. + |+||||||+|||++.++.+||+||
T Consensus 94 ~~~g~L~~~l~~~------~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~---ivH~Dikp~Nill~~~~~~kL~DF 164 (336)
T 3g2f_A 94 YPNGSLXKYLSLH------TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA---ISHRDLNSRNVLVKNDGTCVISDF 164 (336)
T ss_dssp CTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC---EECSSCSGGGEEECTTSCEEECCC
T ss_pred CCCCcHHHHHhhc------ccchhHHHHHHHHHHHHHHHHHhhhccccccccc---eeecccccceEEEcCCCcEEEeec
Confidence 9999999999754 358999999999999999999998 6 999999999999999999999999
Q ss_pred ccccccCCC------------CCCCCCccccCccccCC-------CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCC
Q 006886 483 GLAHLINFP------------TTATRTIGYRAPEVTET-------RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV 543 (627)
Q Consensus 483 G~a~~~~~~------------~~~~~t~~y~aPE~~~~-------~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~ 543 (627)
|+++..... ....||+.|+|||++.+ ..++.++||||||+++|||++|..||.........
T Consensus 165 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~ 244 (336)
T 3g2f_A 165 GLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEY 244 (336)
T ss_dssp TTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCC
T ss_pred cceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHH
Confidence 999765321 13358899999999976 35567899999999999999997776543221111
Q ss_pred -CH----------HHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006886 544 -DL----------PRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 544 -~~----------~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~~ 612 (627)
.. ................+.. ...........+.+++.+||+.||++|||+.|+++.|+++.....
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~ 321 (336)
T 3g2f_A 245 QMAFQTEVGNHPTFEDMQVLVSREKQRPKFPE---AWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWE 321 (336)
T ss_dssp CCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCT---TCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCC
T ss_pred HHhhhcccCCCchHHHHHhhhcccccCCCCCc---ccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHH
Confidence 10 0001111111111111111 111223355578889999999999999999999999999998888
Q ss_pred ccCCCCCC
Q 006886 613 RNRASSGT 620 (627)
Q Consensus 613 ~~~~~~~~ 620 (627)
++.+.+.+
T Consensus 322 ~~~~~~~~ 329 (336)
T 3g2f_A 322 RNKSVSPT 329 (336)
T ss_dssp C-------
T ss_pred hcccCCCc
Confidence 77765543
No 65
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.2e-39 Score=330.09 Aligned_cols=252 Identities=22% Similarity=0.381 Sum_probs=197.8
Q ss_pred hcccCcCCceeEEEEEecC-C-------cEEEEEEecccc-cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEE
Q 006886 339 AEVLGKGSYGSTYKAILED-G-------TTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~-~-------~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~ 409 (627)
.+.||+|+||.||+|..+. + ..||+|++.... ...+.+.+|++++..+ +||||+++++++...+..++||
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 91 (289)
T 4fvq_A 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL-SHKHLVLNYGVCVCGDENILVQ 91 (289)
T ss_dssp EEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTS-CCTTBCCEEEEECCTTCCEEEE
T ss_pred eeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEEeCCCCEEEE
Confidence 4789999999999998653 3 479999986543 4567899999999999 8999999999999999999999
Q ss_pred ecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC--------eEEee
Q 006886 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN--------GCISD 481 (627)
Q Consensus 410 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~--------~ki~D 481 (627)
||+++|+|.+++.... ..+++..++.++.|++.||.|||+.+ |+||||||+|||++.++. +||+|
T Consensus 92 e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D 164 (289)
T 4fvq_A 92 EFVKFGSLDTYLKKNK----NCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164 (289)
T ss_dssp ECCTTCBHHHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred ECCCCCCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccceeeecc
Confidence 9999999999998642 34899999999999999999999998 999999999999998887 99999
Q ss_pred cccccccCCCCCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccc
Q 006886 482 VGLAHLINFPTTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAE 560 (627)
Q Consensus 482 fG~a~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (627)
||++..........+++.|+|||++.+ ..++.++||||||+++|||++|..|+.... .................
T Consensus 165 fg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~ 239 (289)
T 4fvq_A 165 PGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL-----DSQRKLQFYEDRHQLPA 239 (289)
T ss_dssp CCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS-----CHHHHHHHHHTTCCCCC
T ss_pred CcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcccc-----chHHHHHHhhccCCCCC
Confidence 999987655545557889999999977 678999999999999999999655543221 11111111111000000
Q ss_pred ccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccccccCC
Q 006886 561 VFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRNRA 616 (627)
Q Consensus 561 ~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~~~~~~ 616 (627)
. ...++.+++.+||+.||++|||+.|+++.|+++..+......
T Consensus 240 ----------~---~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~~~~ 282 (289)
T 4fvq_A 240 ----------P---KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPRG 282 (289)
T ss_dssp ----------C---SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--------
T ss_pred ----------C---CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCCCCC
Confidence 0 012466788899999999999999999999999887665443
No 66
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.4e-39 Score=336.17 Aligned_cols=239 Identities=20% Similarity=0.311 Sum_probs=195.6
Q ss_pred hcccCcCCceeEEEEEe-cCCcEEEEEEeccc----ccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREV----AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~----~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|.. .+++.||+|++... ......+.+|+++++.+ +||||+++++++...+..++||||+
T Consensus 14 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~lv~E~~- 91 (336)
T 3h4j_B 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL-RHPHIIKLYDVITTPTDIVMVIEYA- 91 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEECCC-
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEECC-
Confidence 47899999999999996 46899999998653 22345789999999999 8999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 92 ~g~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~ 163 (336)
T 3h4j_B 92 GGELFDYIVEK-----KRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF 163 (336)
T ss_dssp CEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBT
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceeccCCcc
Confidence 78999998764 35899999999999999999999998 999999999999999999999999999876443
Q ss_pred -CCCCCCccccCccccCCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006886 492 -TTATRTIGYRAPEVTETRKA-SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
....||+.|+|||++.+..+ +.++||||||+++|+|++|+.||.......... .+........
T Consensus 164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~---------------~i~~~~~~~p 228 (336)
T 3h4j_B 164 LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK---------------KVNSCVYVMP 228 (336)
T ss_dssp TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC---------------CCCSSCCCCC
T ss_pred cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH---------------HHHcCCCCCc
Confidence 34568999999999988776 689999999999999999999997643322111 0000000001
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 006886 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~ 605 (627)
.. ....+.+++.+|+..||.+|||++|++++-.
T Consensus 229 ~~---~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~ 261 (336)
T 3h4j_B 229 DF---LSPGAQSLIRRMIVADPMQRITIQEIRRDPW 261 (336)
T ss_dssp TT---SCHHHHHHHHTTSCSSGGGSCCHHHHTTCHH
T ss_pred cc---CCHHHHHHHHHHcCCChhHCcCHHHHHhChh
Confidence 11 1234567888999999999999999988533
No 67
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=8.2e-40 Score=335.14 Aligned_cols=254 Identities=27% Similarity=0.431 Sum_probs=204.7
Q ss_pred hcccCcCCceeEEEEEe------cCCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEe
Q 006886 339 AEVLGKGSYGSTYKAIL------EDGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~------~~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|+. .+++.||+|++..... ..+.+.+|++++.++.+||||+++++++...+..++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 107 (313)
T 1t46_A 28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITE 107 (313)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred HHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEe
Confidence 47899999999999985 2467899999975432 346789999999999899999999999999999999999
Q ss_pred cCCCCCHHHHhhhcCC-------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCe
Q 006886 411 YMPAGSLFMLLHRNRS-------------DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG 477 (627)
Q Consensus 411 ~~~~g~L~~~l~~~~~-------------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ 477 (627)
|+++|+|.+++..... .....+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+
T Consensus 108 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~ 184 (313)
T 1t46_A 108 YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRIT 184 (313)
T ss_dssp CCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEETTTEE
T ss_pred cCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEcCCCCE
Confidence 9999999999986532 11235899999999999999999999998 9999999999999999999
Q ss_pred EEeecccccccCCCC------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHH
Q 006886 478 CISDVGLAHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVR 550 (627)
Q Consensus 478 ki~DfG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~ 550 (627)
||+|||+++...... ...+++.|+|||++.+..++.++||||||+++|||++ |+.||....... ...
T Consensus 185 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~ 258 (313)
T 1t46_A 185 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS------KFY 258 (313)
T ss_dssp EECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH------HHH
T ss_pred EEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh------HHH
Confidence 999999998765432 2235678999999988899999999999999999999 999997643221 111
Q ss_pred HHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006886 551 SVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 551 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~ 611 (627)
.......... .. ......+.+++.+||+.||.+|||+.|++++|+++....
T Consensus 259 ~~~~~~~~~~-------~~---~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 259 KMIKEGFRML-------SP---EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp HHHHHTCCCC-------CC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HHhccCCCCC-------Cc---ccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence 1111111100 00 112235677888999999999999999999999987643
No 68
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2.7e-39 Score=337.99 Aligned_cols=246 Identities=19% Similarity=0.281 Sum_probs=191.7
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCCH
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 417 (627)
.+.||+|+||.||+++.+ +++.||||++.......+.+.+|+.+++.+ +||||+++++++...+..++||||+++|+|
T Consensus 25 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~~~L 103 (361)
T 3uc3_A 25 VKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSL-RHPNIVRFKEVILTPTHLAIIMEYASGGEL 103 (361)
T ss_dssp EEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred EEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhC-CCCCCCcEEEEEeeCCEEEEEEEeCCCCCH
Confidence 478999999999999976 689999999987666667889999999999 899999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC--eEEeecccccccCC---CC
Q 006886 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN--GCISDVGLAHLINF---PT 492 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~--~ki~DfG~a~~~~~---~~ 492 (627)
.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++. +||+|||+++.... ..
T Consensus 104 ~~~l~~~-----~~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~ 175 (361)
T 3uc3_A 104 YERICNA-----GRFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK 175 (361)
T ss_dssp HHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC----------
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCC
Confidence 9999764 25899999999999999999999998 999999999999988765 99999999975432 23
Q ss_pred CCCCCccccCccccCCCCCCCc-chhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006886 493 TATRTIGYRAPEVTETRKASQK-SDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~-~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
...||+.|+|||++.+..++.+ +||||||+++|||++|+.||....... ............... + .....
T Consensus 176 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~~~~~~~~~~~~---~----~~~~~ 246 (361)
T 3uc3_A 176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR--DYRKTIQRILSVKYS---I----PDDIR 246 (361)
T ss_dssp -----CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC--CHHHHHHHHHTTCCC---C----CTTSC
T ss_pred CCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH--HHHHHHHHHhcCCCC---C----CCcCC
Confidence 4568999999999988777655 899999999999999999998643322 222322222221110 0 00111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 006886 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~ 605 (627)
. ...+.+++.+||..+|++|||+.|++++-.
T Consensus 247 ~---s~~~~~li~~~L~~dP~~Rps~~ell~hp~ 277 (361)
T 3uc3_A 247 I---SPECCHLISRIFVADPATRISIPEIKTHSW 277 (361)
T ss_dssp C---CHHHHHHHHHHSCSCTTTSCCHHHHHTSHH
T ss_pred C---CHHHHHHHHHHccCChhHCcCHHHHHhCcc
Confidence 1 234567888999999999999999998633
No 69
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=5.1e-39 Score=333.59 Aligned_cols=245 Identities=20% Similarity=0.303 Sum_probs=194.6
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+++.+ +++.||+|++..... ..+.+..|.+++..+.+||||+++++++.+.+..++||||++
T Consensus 14 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~ 93 (345)
T 3a8x_A 14 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 93 (345)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCC
Confidence 478999999999999976 588999999976432 234577889999888789999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC---
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF--- 490 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~--- 490 (627)
+|+|..++... ..+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 94 gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~ 165 (345)
T 3a8x_A 94 GGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD 165 (345)
T ss_dssp SCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTC
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccccccccCCCC
Confidence 99999999864 25899999999999999999999998 99999999999999999999999999986422
Q ss_pred -CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCC--CHHHHHHHHhhhcccccccchhhh
Q 006886 491 -PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV--DLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 491 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.. ................ +
T Consensus 166 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~--~----- 238 (345)
T 3a8x_A 166 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR--I----- 238 (345)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC--C-----
T ss_pred cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC--C-----
Confidence 23456899999999999999999999999999999999999999753322111 1111111111111100 0
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 006886 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKM------DDVVR 602 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~------~ev~~ 602 (627)
... ...++.+++.+||..||++||++ .|+++
T Consensus 239 -p~~---~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~ 275 (345)
T 3a8x_A 239 -PRS---LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 275 (345)
T ss_dssp -CTT---SCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT
T ss_pred -CCC---CCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc
Confidence 011 12346678889999999999996 56665
No 70
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=9.9e-39 Score=326.33 Aligned_cols=249 Identities=29% Similarity=0.477 Sum_probs=195.1
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCC
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|..+ ..+|+|+++.... ..+.+.+|++++..+ +||||+++++++. .+..++||||+++|
T Consensus 41 ~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~-~~~~~lv~e~~~~~ 116 (307)
T 3lb7_A 41 STRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKT-RHVNILLFMGYMT-KDNLAIVTQWCEGS 116 (307)
T ss_dssp EEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEC-SSSCEEEEECCSSC
T ss_pred EeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEc-cCcEEEEEecCCCC
Confidence 478999999999999865 4689998875433 345788999999999 8999999999865 55688999999999
Q ss_pred CHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC-----
Q 006886 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF----- 490 (627)
Q Consensus 416 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~----- 490 (627)
+|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 117 ~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~ 189 (307)
T 3lb7_A 117 SLYKHLHVQ----ETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp BHHHHHHTS----CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCSSSEEECTTSCEEECCCCSSCC--------
T ss_pred cHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCChhhEEEcCCCCEEEccCCCceecccccccc
Confidence 999999754 246899999999999999999999998 99999999999999999999999999976532
Q ss_pred -CCCCCCCccccCccccC---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhh
Q 006886 491 -PTTATRTIGYRAPEVTE---TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVEL 566 (627)
Q Consensus 491 -~~~~~~t~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 566 (627)
.....||+.|+|||++. +..++.++||||||+++|||++|+.||...... .............. .+
T Consensus 190 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~------~~~~~~~~~~~~~~----~~ 259 (307)
T 3lb7_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR------DQIIFMVGRGYASP----DL 259 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH------HHHHHHHHHTCCCC----CS
T ss_pred cccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcH------HHHHHHHhcCCCCc----ch
Confidence 12345889999999985 667899999999999999999999999754321 11111111111110 00
Q ss_pred hcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006886 567 LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 567 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~ 610 (627)
... .......+.+++.+||+.+|++||++.|+++.|+.++..
T Consensus 260 ~~~--~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~ 301 (307)
T 3lb7_A 260 SKL--YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp TTS--CSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred hhh--hcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence 000 011224567788899999999999999999999998764
No 71
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=4.2e-39 Score=337.84 Aligned_cols=240 Identities=19% Similarity=0.278 Sum_probs=195.7
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccc----ccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV----AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~----~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||++..+ +++.||+|++... ....+.+.+|++++..+ +||||+++++++.+.+..++||||++
T Consensus 20 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lv~e~~~ 98 (384)
T 4fr4_A 20 LRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL-EHPFLVNLWYSFQDEEDMFMVVDLLL 98 (384)
T ss_dssp EEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEEecCC
Confidence 478999999999999966 5889999998653 23457788999999999 99999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|..++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 99 gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 170 (384)
T 4fr4_A 99 GGDLRYHLQQN-----VHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ 170 (384)
T ss_dssp TEEHHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeeccCCCc
Confidence 99999999754 35899999999999999999999998 999999999999999999999999999876433
Q ss_pred -CCCCCCccccCccccCC---CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006886 492 -TTATRTIGYRAPEVTET---RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~---~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
....||+.|+|||++.. ..++.++|||||||++|||++|+.||....... ............ .
T Consensus 171 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~---~~~~~~~~~~~~-~--------- 237 (384)
T 4fr4_A 171 ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS---SKEIVHTFETTV-V--------- 237 (384)
T ss_dssp BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC---HHHHHHHHHHCC-C---------
T ss_pred eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc---HHHHHHHHhhcc-c---------
Confidence 34568999999999864 458999999999999999999999997543322 122221111110 0
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 006886 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPK-MDDVVR 602 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs-~~ev~~ 602 (627)
.........+.+++.+||..+|.+||+ ++++.+
T Consensus 238 --~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 238 --TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp --CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred --CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 000112235677888999999999998 676654
No 72
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.9e-39 Score=326.76 Aligned_cols=251 Identities=25% Similarity=0.418 Sum_probs=193.2
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCCHH
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 418 (627)
.+.||+|+||.||++... ++.||||++... ...+.+.+|++++.++ +||||+++++++. +..++||||+++|+|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~ 87 (307)
T 2eva_A 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESE-SERKAFIVELRQLSRV-NHPNIVKLYGACL--NPVCLVMEYAEGGSLY 87 (307)
T ss_dssp EEEEECCSSSEEEEEEET-TEEEEEEECSST-THHHHHHHHHHHHHHC-CCTTBCCEEEBCT--TTTEEEEECCTTCBHH
T ss_pred eeEeecCCCceEEEEEEC-CeeEEEEEecCh-hHHHHHHHHHHHHhcC-CCCCcCeEEEEEc--CCcEEEEEcCCCCCHH
Confidence 478999999999999986 788999998643 3456789999999999 9999999999876 4578999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC-eEEeecccccccCCC-CCCCC
Q 006886 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN-GCISDVGLAHLINFP-TTATR 496 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~-~ki~DfG~a~~~~~~-~~~~~ 496 (627)
+++..... ...+++..++.++.|+++||.|||+.+...|+||||||+||+++.++. +||+|||++...... ....|
T Consensus 88 ~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~g 165 (307)
T 2eva_A 88 NVLHGAEP--LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKG 165 (307)
T ss_dssp HHHHCSSS--EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------C
T ss_pred HHHhccCC--CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccccCCC
Confidence 99985421 234788999999999999999999932223999999999999998887 799999999766443 33458
Q ss_pred CccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHH
Q 006886 497 TIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEM 576 (627)
Q Consensus 497 t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 576 (627)
|+.|+|||++.+..++.++||||||+++|||++|+.||...... ............ .... .....
T Consensus 166 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~~~-~~~~----------~~~~~ 230 (307)
T 2eva_A 166 SAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP----AFRIMWAVHNGT-RPPL----------IKNLP 230 (307)
T ss_dssp CTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS----HHHHHHHHHTTC-CCCC----------BTTCC
T ss_pred CCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc----HHHHHHHHhcCC-CCCc----------ccccC
Confidence 99999999999999999999999999999999999999754321 111111111111 1100 01112
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006886 577 VQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 577 ~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~ 611 (627)
..+.+++.+||+.+|++|||+.|+++.|+.+...-
T Consensus 231 ~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 265 (307)
T 2eva_A 231 KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265 (307)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence 35667888999999999999999999999987543
No 73
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=4.6e-39 Score=330.02 Aligned_cols=238 Identities=21% Similarity=0.322 Sum_probs=198.2
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+++.+ +|+.||+|+++... ...+.+.+|..++..+ +||||+++++++.+.+..++||||++
T Consensus 11 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~lv~e~~~ 89 (318)
T 1fot_A 11 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THPFIIRMWGTFQDAQQIFMIMDYIE 89 (318)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CBTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhC-CCCCCceEeEEEEeCCEEEEEEeCCC
Confidence 478999999999999975 68999999997542 3456788899999998 99999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC-C
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-T 492 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~-~ 492 (627)
+|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 90 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~ 161 (318)
T 1fot_A 90 GGELFSLLRKS-----QRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY 161 (318)
T ss_dssp SCBHHHHHHHT-----SSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBC
T ss_pred CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecCCccc
Confidence 99999999864 35899999999999999999999998 999999999999999999999999999876543 3
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006886 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
+..||+.|+|||++.+..++.++||||||+++|||++|+.||.... .......+...... + ....
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~i~~~~~~---~------p~~~ 226 (318)
T 1fot_A 162 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN------TMKTYEKILNAELR---F------PPFF 226 (318)
T ss_dssp CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHCCCC---C------CTTS
T ss_pred cccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCC---C------CCCC
Confidence 4568999999999999999999999999999999999999997532 12222222222110 0 0111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 006886 573 EEEMVQMLQIALSCVAKVPDSRP-----KMDDVVRM 603 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~p~~RP-----s~~ev~~~ 603 (627)
+ .++.+++.+|+..||++|| +++|++++
T Consensus 227 ~---~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 227 N---EDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp C---HHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred C---HHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 2 3456778899999999999 89998863
No 74
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=3.4e-39 Score=333.20 Aligned_cols=240 Identities=21% Similarity=0.340 Sum_probs=191.0
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCc-----------
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDE----------- 404 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~----------- 404 (627)
.+.||+|+||.||+|+.+ +++.||||+++... ...+.+.+|++++.++ +||||+++++++.+...
T Consensus 11 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~~~~~~~ 89 (332)
T 3qd2_B 11 IQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL-EHPGIVRYFNAWLETPPEKWQEEMDEIW 89 (332)
T ss_dssp EEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSC-CCTTBCCEEEEEEECCSCHHHHHHHC--
T ss_pred eeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhC-CCCCEeeEEEEEEEeccchhhhhhhhhh
Confidence 478999999999999976 78999999987443 2457799999999999 89999999999865432
Q ss_pred ----------------------------------------------eEEEEecCCCCCHHHHhhhcCCCCCCCCCHHHHH
Q 006886 405 ----------------------------------------------KLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRM 438 (627)
Q Consensus 405 ----------------------------------------------~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~ 438 (627)
.++||||+++|+|.+++..... ....++..++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~ 167 (332)
T 3qd2_B 90 LKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS--LEDREHGVCL 167 (332)
T ss_dssp ------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS--GGGSCHHHHH
T ss_pred hccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC--ccchhhHHHH
Confidence 7899999999999999986532 3456788899
Q ss_pred HHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----------------CCCCCCccccC
Q 006886 439 KIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----------------TTATRTIGYRA 502 (627)
Q Consensus 439 ~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~----------------~~~~~t~~y~a 502 (627)
.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ....||+.|+|
T Consensus 168 ~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 244 (332)
T 3qd2_B 168 HIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS 244 (332)
T ss_dssp HHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred HHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence 99999999999999998 999999999999999999999999999876432 22357899999
Q ss_pred ccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHH
Q 006886 503 PEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQI 582 (627)
Q Consensus 503 PE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l 582 (627)
||++.+..++.++||||||+++|||++|..|+... ...... ..... .. .........+.++
T Consensus 245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~--------~~~~~~-~~~~~----~~------~~~~~~~~~~~~l 305 (332)
T 3qd2_B 245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER--------VRIITD-VRNLK----FP------LLFTQKYPQEHMM 305 (332)
T ss_dssp HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH--------HHHHHH-HHTTC----CC------HHHHHHCHHHHHH
T ss_pred hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH--------HHHHHH-hhccC----CC------cccccCChhHHHH
Confidence 99999999999999999999999999987764210 000110 10100 00 0112333456788
Q ss_pred HHHcccCCCCCCCCHHHHHHH
Q 006886 583 ALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 583 ~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
+.+||+.||++|||+.|++++
T Consensus 306 i~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 306 VQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHCSSGGGSCCHHHHHHS
T ss_pred HHHHccCCCCcCCCHHHHhhc
Confidence 899999999999999999863
No 75
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=8.7e-40 Score=336.57 Aligned_cols=242 Identities=22% Similarity=0.341 Sum_probs=193.6
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|... +++.||||++.... ...+.+.+|+.++..+ +||||+++++++.+.+..++||||+++|
T Consensus 12 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e~~~~~ 90 (323)
T 3tki_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGG 90 (323)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCeEEEEEEcCCCC
Confidence 478999999999999976 78999999986432 2346688999999999 9999999999999999999999999999
Q ss_pred CHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----
Q 006886 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491 (627)
Q Consensus 416 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~---- 491 (627)
+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 91 ~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 162 (323)
T 3tki_A 91 ELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (323)
T ss_dssp EGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred cHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence 999998653 35899999999999999999999998 999999999999999999999999999765321
Q ss_pred --CCCCCCccccCccccCCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006886 492 --TTATRTIGYRAPEVTETRKA-SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
....||+.|+|||++.+..+ +.++||||||+++|||++|+.||........ . .......... ..
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~----~~~~~~~~~~---~~----- 229 (323)
T 3tki_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-E----YSDWKEKKTY---LN----- 229 (323)
T ss_dssp CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH-H----HHHHHTTCTT---ST-----
T ss_pred ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH-H----HHHHhccccc---CC-----
Confidence 24568999999999977665 7789999999999999999999976432211 1 1111111000 00
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006886 569 YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMI 604 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L 604 (627)
........+.+++.+||..||++|||+.|++++-
T Consensus 230 --~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~ 263 (323)
T 3tki_A 230 --PWKKIDSAPLALLHKILVENPSARITIPDIKKDR 263 (323)
T ss_dssp --TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCT
T ss_pred --ccccCCHHHHHHHHHHccCChhhCcCHHHHhhCh
Confidence 0111223456788899999999999999998753
No 76
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=3.4e-39 Score=345.35 Aligned_cols=242 Identities=18% Similarity=0.297 Sum_probs=195.3
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||++... +|+.||+|++..... ..+.+.+|++++..+ +||||+++++++.+.+..++||||+++
T Consensus 16 ~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~lv~E~~~g 94 (444)
T 3soa_A 16 FEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL-KHPNIVRLHDSISEEGHHYLIFDLVTG 94 (444)
T ss_dssp EEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHC-CBTTBCCEEEEEECSSEEEEEECCCBC
T ss_pred EEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCcCCCeEEEEEEECCEEEEEEEeCCC
Confidence 578999999999999864 689999999865432 345688999999999 999999999999999999999999999
Q ss_pred CCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEec---CCCCeEEeecccccccCCC
Q 006886 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLT---QDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 415 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~---~~~~~ki~DfG~a~~~~~~ 491 (627)
|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++ .++.+||+|||+++.....
T Consensus 95 g~L~~~i~~~-----~~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~ 166 (444)
T 3soa_A 95 GELFEDIVAR-----EYYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE 166 (444)
T ss_dssp CBHHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTT
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCceeEEecCC
Confidence 9999999864 35899999999999999999999998 99999999999998 4678999999999876543
Q ss_pred ----CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006886 492 ----TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 492 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
....||+.|+|||++.+..++.++||||+||++|+|++|+.||..... ......+..... +....
T Consensus 167 ~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~------~~~~~~i~~~~~-----~~~~~ 235 (444)
T 3soa_A 167 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ------HRLYQQIKAGAY-----DFPSP 235 (444)
T ss_dssp CCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHTCC-----CCCTT
T ss_pred CceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH------HHHHHHHHhCCC-----CCCcc
Confidence 234689999999999998999999999999999999999999975321 122222221111 10001
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
.....+ .++.+++.+||..||++|||+.|++++
T Consensus 236 ~~~~~s---~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 236 EWDTVT---PEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp TTTTSC---HHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ccccCC---HHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 111222 345677889999999999999999874
No 77
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=4.6e-39 Score=335.11 Aligned_cols=245 Identities=18% Similarity=0.306 Sum_probs=197.2
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc------cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEec
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA------ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~------~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||.||+|..+ +++.||||++.... ...+.+.+|++++..+ +||||+++++++.+++..++||||
T Consensus 29 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~e~ 107 (351)
T 3c0i_A 29 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-KHPHIVELLETYSSDGMLYMVFEF 107 (351)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEEeC
Confidence 578999999999999965 68999999986431 2467899999999999 999999999999999999999999
Q ss_pred CCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC---eEEeeccccccc
Q 006886 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN---GCISDVGLAHLI 488 (627)
Q Consensus 412 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~---~ki~DfG~a~~~ 488 (627)
+++|+|.+++..... .+..+++..+..++.|++.||.|||+++ |+||||||+|||++.++. +||+|||+++..
T Consensus 108 ~~g~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~ 183 (351)
T 3c0i_A 108 MDGADLCFEIVKRAD-AGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183 (351)
T ss_dssp CSSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred CCCCCHHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence 999999988865421 1345899999999999999999999998 999999999999987655 999999999876
Q ss_pred CCC----CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006886 489 NFP----TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 489 ~~~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
... ....||+.|+|||++.+..++.++|||||||++|||++|+.||.... ......+...... +++
T Consensus 184 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-------~~~~~~i~~~~~~---~~~ 253 (351)
T 3c0i_A 184 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK-------ERLFEGIIKGKYK---MNP 253 (351)
T ss_dssp CTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH-------HHHHHHHHHTCCC---CCH
T ss_pred cCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH-------HHHHHHHHcCCCC---CCc
Confidence 543 23458999999999999899999999999999999999999997531 1112222211110 111
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
.. ... ...++.+++.+||..||++|||+.|++++
T Consensus 254 ~~--~~~---~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 254 RQ--WSH---ISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp HH--HTT---SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cc--ccc---CCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 10 011 12356678889999999999999999873
No 78
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.8e-39 Score=336.48 Aligned_cols=238 Identities=23% Similarity=0.351 Sum_probs=195.9
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccc----ccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV----AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~----~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.+ +++.||+|+++.. ....+.+..|.+++..+.+||||+++++++.+.+..++||||++
T Consensus 22 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 101 (345)
T 1xjd_A 22 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLN 101 (345)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCC
Confidence 478999999999999976 5889999999754 23456778889988887799999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC---
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF--- 490 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~--- 490 (627)
+|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 102 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 173 (345)
T 1xjd_A 102 GGDLMYHIQSC-----HKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA 173 (345)
T ss_dssp TCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhhhhcccCCC
Confidence 99999999864 24899999999999999999999998 99999999999999999999999999986432
Q ss_pred -CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006886 491 -PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 491 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+..... .+.
T Consensus 174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~~~~~i~~~~~---~~p------ 238 (345)
T 1xjd_A 174 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE------EELFHSIRMDNP---FYP------ 238 (345)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCC---CCC------
T ss_pred cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH------HHHHHHHHhCCC---CCC------
Confidence 2345689999999999999999999999999999999999999975421 122222221110 000
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHH-HHHH
Q 006886 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMD-DVVR 602 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~-ev~~ 602 (627)
... ..++.+++.+||..+|++||++. |+++
T Consensus 239 ~~~---s~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 239 RWL---EKEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp TTS---CHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred ccc---CHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 111 23456788899999999999998 6653
No 79
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.2e-39 Score=333.69 Aligned_cols=253 Identities=23% Similarity=0.392 Sum_probs=190.6
Q ss_pred hcccCcCCceeEEEEEecCCc----EEEEEEecccc---cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCce------
Q 006886 339 AEVLGKGSYGSTYKAILEDGT----TVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEK------ 405 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~----~vavK~l~~~~---~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~------ 405 (627)
.+.||+|+||.||+|...... .||||+++... ...+.+.+|++++.++ +||||+++++++......
T Consensus 28 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~ 106 (323)
T 3qup_A 28 GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF-DHPHVAKLVGVSLRSRAKGRLPIP 106 (323)
T ss_dssp EEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTC-CCTTBCCCCEEEECC-------CE
T ss_pred eceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHC-CCCceehhhceeeccccccCCCcc
Confidence 578999999999999966432 79999987542 2356789999999999 999999999999877655
Q ss_pred EEEEecCCCCCHHHHhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccc
Q 006886 406 LVVYSYMPAGSLFMLLHRNRSD-GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGL 484 (627)
Q Consensus 406 ~lv~e~~~~g~L~~~l~~~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~ 484 (627)
++|+||+++|+|.+++...... ....+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 107 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~~~kl~Dfg~ 183 (323)
T 3qup_A 107 MVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGL 183 (323)
T ss_dssp EEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC
T ss_pred EEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCCCEEEeeccc
Confidence 8999999999999999764321 1235899999999999999999999998 99999999999999999999999999
Q ss_pred ccccCCCC------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcc
Q 006886 485 AHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEW 557 (627)
Q Consensus 485 a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 557 (627)
++...... ...+++.|+|||++.+..++.++||||||+++|||++ |+.||......+ + .........
T Consensus 184 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~---~~~~~~~~~ 257 (323)
T 3qup_A 184 SRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE---I---YNYLIGGNR 257 (323)
T ss_dssp -----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---H---HHHHHTTCC
T ss_pred cccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH---H---HHHHhcCCC
Confidence 98764322 2235678999999998899999999999999999999 999997643221 1 111111111
Q ss_pred cccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006886 558 TAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 558 ~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~~ 612 (627)
. .........+.+++.+||+.||++|||+.++++.|+++....-
T Consensus 258 ~-----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~ 301 (323)
T 3qup_A 258 L-----------KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLS 301 (323)
T ss_dssp C-----------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred C-----------CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhh
Confidence 0 0111222456788889999999999999999999999865543
No 80
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-39 Score=336.59 Aligned_cols=255 Identities=23% Similarity=0.344 Sum_probs=200.6
Q ss_pred hcccCcCCceeEEEEEec------CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEe
Q 006886 339 AEVLGKGSYGSTYKAILE------DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|... ++..||||++.... ...+.+.+|++++.++.+||||+++++++...+..++|||
T Consensus 50 ~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 129 (344)
T 1rjb_A 50 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFE 129 (344)
T ss_dssp EEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEe
Confidence 578999999999999962 35689999997542 2346789999999999889999999999999999999999
Q ss_pred cCCCCCHHHHhhhcCCC------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEec
Q 006886 411 YMPAGSLFMLLHRNRSD------------------GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLT 472 (627)
Q Consensus 411 ~~~~g~L~~~l~~~~~~------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~ 472 (627)
|+++|+|.+++...... ....+++..++.++.|++.||.|||+.+ |+||||||+|||++
T Consensus 130 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~ 206 (344)
T 1rjb_A 130 YCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVT 206 (344)
T ss_dssp CCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCSGGGEEEE
T ss_pred cCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEEc
Confidence 99999999999864321 1134899999999999999999999998 99999999999999
Q ss_pred CCCCeEEeecccccccCCCC------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCH
Q 006886 473 QDLNGCISDVGLAHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDL 545 (627)
Q Consensus 473 ~~~~~ki~DfG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~ 545 (627)
.++.+||+|||++....... ...+|+.|+|||++.+..++.++||||||+++|||++ |+.||.......
T Consensus 207 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---- 282 (344)
T 1rjb_A 207 HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA---- 282 (344)
T ss_dssp TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH----
T ss_pred CCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH----
Confidence 99999999999998764332 2235678999999988899999999999999999998 999997643221
Q ss_pred HHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006886 546 PRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 546 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~~ 612 (627)
............. ........+.+++.+||..||.+|||+.|++++|+.+....-
T Consensus 283 --~~~~~~~~~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 337 (344)
T 1rjb_A 283 --NFYKLIQNGFKMD----------QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE 337 (344)
T ss_dssp --HHHHHHHTTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred --HHHHHHhcCCCCC----------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHH
Confidence 1112222211110 001112356778889999999999999999999999876543
No 81
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=3e-39 Score=326.98 Aligned_cols=248 Identities=25% Similarity=0.386 Sum_probs=205.4
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCCH
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 417 (627)
.+.||+|+||.||+|..+ ++..||+|++.......+.+.+|++++..+ +||||+++++++...+..++||||+++|+|
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 96 (288)
T 3kfa_A 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTYGNL 96 (288)
T ss_dssp EEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSEEEEEECCTTEEH
T ss_pred EeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCEEEEEEcCCCCcH
Confidence 478999999999999976 488899999987666678899999999999 899999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-----
Q 006886 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT----- 492 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~~----- 492 (627)
.+++.... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 97 ~~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 170 (288)
T 3kfa_A 97 LDYLRECN---RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170 (288)
T ss_dssp HHHHHHCC---TTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEET
T ss_pred HHHHHhcc---cCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceeccCCcccccc
Confidence 99998643 346899999999999999999999998 9999999999999999999999999998765432
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006886 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
...+++.|+|||++.+..++.++||||||+++|+|++ |..||...... .....+ ...... ..
T Consensus 171 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~---~~~~~~----~~~~~~----------~~ 233 (288)
T 3kfa_A 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---QVYELL----EKDYRM----------ER 233 (288)
T ss_dssp TEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GHHHHH----HTTCCC----------CC
T ss_pred CCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHH----hccCCC----------CC
Confidence 1234678999999988899999999999999999999 99999754322 111111 111000 00
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006886 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~ 610 (627)
.......+.+++.+|+..+|.+|||+.|+++.|+.+...
T Consensus 234 ~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 234 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 111223567788899999999999999999999998654
No 82
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.5e-39 Score=340.75 Aligned_cols=254 Identities=17% Similarity=0.218 Sum_probs=192.1
Q ss_pred hcccCcCCceeEEEEEecC------CcEEEEEEecccccCHHHHHHHHHHHHHhc--------------cCCCeeeeeeE
Q 006886 339 AEVLGKGSYGSTYKAILED------GTTVVVKRLREVAATKREFEQQMEVVGTIG--------------KHSNVVPVRAY 398 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~------~~~vavK~l~~~~~~~~~~~~e~~~l~~l~--------------~h~niv~l~~~ 398 (627)
.+.||+|+||.||+|.+++ ++.||||++.... ..+..|++++.++. +||||++++++
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~ 116 (364)
T 3op5_A 40 GLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDN---GPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGS 116 (364)
T ss_dssp EEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTC---HHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEE
T ss_pred EEEEecCCCeEEEEeeecCccccccccceEEEEeeccc---hhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEee
Confidence 4789999999999999764 4789999986532 23334444433332 69999999999
Q ss_pred EeeC----CceEEEEecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEec--
Q 006886 399 YYSK----DEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLT-- 472 (627)
Q Consensus 399 ~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~-- 472 (627)
+... ...++||||+ +|+|.+++... ...+++..++.++.|++.||.|||+.+ |+||||||+|||++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~----~~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 117 GLHDKNGKSYRFMIMDRF-GSDLQKIYEAN----AKRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEETTEEEEEEEEECE-EEEHHHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEESS
T ss_pred eeeccCCcceEEEEEeCC-CCCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEecC
Confidence 8865 3478999999 99999999864 246999999999999999999999998 99999999999999
Q ss_pred CCCCeEEeecccccccCCC-----------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCC
Q 006886 473 QDLNGCISDVGLAHLINFP-----------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDD 541 (627)
Q Consensus 473 ~~~~~ki~DfG~a~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~ 541 (627)
.++.+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~ 268 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP 268 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH
Confidence 8899999999999765321 22338999999999999999999999999999999999999998533221
Q ss_pred CCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006886 542 VVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~ 610 (627)
............ .....++..+. .... ..++.+++..||..+|++||++.++++.|+++...
T Consensus 269 --~~~~~~~~~~~~-~~~~~~~~~~~-~~~~---~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~ 330 (364)
T 3op5_A 269 --KYVRDSKIRYRE-NIASLMDKCFP-AANA---PGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA 330 (364)
T ss_dssp --HHHHHHHHHHHH-CHHHHHHHHSC-TTCC---CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHhhh-hHHHHHHHhcc-cccC---HHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 111111111111 11112221111 0111 23566788899999999999999999999998654
No 83
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=326.29 Aligned_cols=237 Identities=19% Similarity=0.227 Sum_probs=188.4
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccccC---HHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAAT---KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||+||+|+.. +++.||||++...... ...+..|+..+.++.+||||+++++++.+.+..++||||+ +
T Consensus 62 ~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~ 140 (311)
T 3p1a_A 62 LSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-G 140 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-C
T ss_pred eheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-C
Confidence 478999999999999976 7899999998654332 3345566666666669999999999999999999999999 7
Q ss_pred CCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006886 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
|+|.+++.... ..++|..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 141 ~~L~~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 213 (311)
T 3p1a_A 141 PSLQQHCEAWG----ASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAG 213 (311)
T ss_dssp CBHHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC-----
T ss_pred CCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeecccCCCC
Confidence 79999987652 46999999999999999999999998 999999999999999999999999999876433
Q ss_pred CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006886 492 TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
....||+.|+|||++.+ .++.++||||||+++|||++|..|+.... . ... +... ...+...
T Consensus 214 ~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~--------~-~~~-~~~~----~~~~~~~---- 274 (311)
T 3p1a_A 214 EVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE--------G-WQQ-LRQG----YLPPEFT---- 274 (311)
T ss_dssp -CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH--------H-HHH-HTTT----CCCHHHH----
T ss_pred cccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc--------H-HHH-Hhcc----CCCcccc----
Confidence 23458999999999876 78999999999999999999977764311 0 111 1111 1111111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
.....++.+++.+||+.||++|||+.|++++
T Consensus 275 -~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 275 -AGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp -TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -cCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 0112456778889999999999999999863
No 84
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=2e-39 Score=332.43 Aligned_cols=251 Identities=25% Similarity=0.388 Sum_probs=202.2
Q ss_pred hcccCcCCceeEEEEEe------cCCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEe
Q 006886 339 AEVLGKGSYGSTYKAIL------EDGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~------~~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|.. .+++.||||++..... ..+.+.+|++++..+ +||||+++++++...+..++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e 106 (314)
T 2ivs_A 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV-NHPHVIKLYGACSQDGPLLLIVE 106 (314)
T ss_dssp EEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhC-CCCceeeEEEEEecCCceEEEEe
Confidence 47899999999999986 2357899999975432 346788999999999 99999999999999999999999
Q ss_pred cCCCCCHHHHhhhcCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe
Q 006886 411 YMPAGSLFMLLHRNRSD-------------------GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL 471 (627)
Q Consensus 411 ~~~~g~L~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl 471 (627)
|+++|+|.+++...... ....+++..++.++.|++.||.|||+.+ |+||||||+||++
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dikp~NIli 183 (314)
T 2ivs_A 107 YAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLAARNILV 183 (314)
T ss_dssp CCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEE
T ss_pred ecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---CcccccchheEEE
Confidence 99999999999865321 1234899999999999999999999998 9999999999999
Q ss_pred cCCCCeEEeecccccccCCC------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCC
Q 006886 472 TQDLNGCISDVGLAHLINFP------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVD 544 (627)
Q Consensus 472 ~~~~~~ki~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~ 544 (627)
+.++.+||+|||+++..... ....+++.|+|||++.+..++.++||||||+++|||++ |+.||.......
T Consensus 184 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--- 260 (314)
T 2ivs_A 184 AEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER--- 260 (314)
T ss_dssp ETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---
Confidence 99999999999999866432 22345778999999988889999999999999999999 999997543221
Q ss_pred HHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006886 545 LPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~ 610 (627)
+.. ......... ........+.+++.+||+.||++||++.|+++.|+++...
T Consensus 261 ~~~----~~~~~~~~~----------~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 261 LFN----LLKTGHRME----------RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp HHH----HHHTTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHH----HhhcCCcCC----------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 111 111111100 0011223567788899999999999999999999998653
No 85
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.4e-39 Score=355.67 Aligned_cols=247 Identities=26% Similarity=0.419 Sum_probs=204.7
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCCHH
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 418 (627)
.+.||+|+||.||+|.++++..||||+++......++|.+|++++.++ +||||+++++++.+ +..++||||+++|+|.
T Consensus 272 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~ 349 (535)
T 2h8h_A 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 349 (535)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEEEECCCTTEEHH
T ss_pred heecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhC-CCCCEeeEEEEEee-ccceEeeehhcCCcHH
Confidence 578999999999999998888899999987666778899999999999 99999999999876 6789999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC-----CC
Q 006886 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-----TT 493 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~-----~~ 493 (627)
+++.... ...+++..++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 350 ~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~ 423 (535)
T 2h8h_A 350 DFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 423 (535)
T ss_dssp HHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCS
T ss_pred HHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccC
Confidence 9997532 235899999999999999999999998 999999999999999999999999999876431 23
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006886 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
..++..|+|||++.+..++.++||||||+++|||++ |+.||..... ......+. ...... ..
T Consensus 424 ~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~------~~~~~~i~-~~~~~~----------~~ 486 (535)
T 2h8h_A 424 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN------REVLDQVE-RGYRMP----------CP 486 (535)
T ss_dssp TTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH------HHHHHHHH-TTCCCC----------CC
T ss_pred CcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHH-cCCCCC----------CC
Confidence 345778999999988899999999999999999999 9999975421 11122111 111000 01
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006886 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~ 610 (627)
......+.+++.+||+.+|++|||+++|++.|+.+...
T Consensus 487 ~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 487 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 12234567788899999999999999999999998654
No 86
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=4.8e-39 Score=322.13 Aligned_cols=248 Identities=25% Similarity=0.396 Sum_probs=199.9
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCCeeeeeeEEeeC--CceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSK--DEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.+ ++.||||++..... ..+.+.+|++++.++ +||||+++++++... +..++||||++
T Consensus 15 ~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (271)
T 3kmu_A 15 LTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIF-SHPNVLPVLGACQSPPAPHPTLITHWMP 92 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCC-SCTTEECEEEEECTTTSSSCEEEEECCT
T ss_pred HHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhc-CCCchhheEEEEccCCCCCeEeeecccC
Confidence 478999999999999986 88999999875432 345688999999999 899999999999877 67899999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCC
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTT 493 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~~~ 493 (627)
+|+|.+++.... ...+++..++.++.|++.||.|||+.+ ++|+||||||+||+++.++.++|+|||++..... ..
T Consensus 93 ~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~-~~ 167 (271)
T 3kmu_A 93 YGSLYNVLHEGT---NFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQS-PG 167 (271)
T ss_dssp TCBHHHHHHSCS---SCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC-TT
T ss_pred CCcHHHHHhhcc---cCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeecc-cC
Confidence 999999998642 235899999999999999999999975 5699999999999999999999999998765433 34
Q ss_pred CCCCccccCccccCCCCCCC---cchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006886 494 ATRTIGYRAPEVTETRKASQ---KSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~---~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
..+|+.|+|||++.+..++. ++||||||+++|||++|+.||..... ................ .
T Consensus 168 ~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~~~~~~~-------~- 233 (271)
T 3kmu_A 168 RMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN------MEIGMKVALEGLRPTI-------P- 233 (271)
T ss_dssp CBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH------HHHHHHHHHSCCCCCC-------C-
T ss_pred ccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh------HHHHHHHHhcCCCCCC-------C-
Confidence 56789999999997765544 79999999999999999999975321 1111222211111110 0
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006886 571 DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~ 609 (627)
......+.+++.+||+.||++|||+.|+++.|+++++
T Consensus 234 --~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 234 --PGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp --TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred --CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 1122356778889999999999999999999999875
No 87
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=7.1e-40 Score=337.71 Aligned_cols=246 Identities=22% Similarity=0.396 Sum_probs=194.7
Q ss_pred hcccCcCCceeEEEEEec-CCcE----EEEEEecccc--cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEec
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTT----VVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~----vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||.||+|.+. +++. ||+|.+.... ...+.+.+|+.++..+ +||||+++++++. ++..++|+||
T Consensus 18 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-~~~~~~v~e~ 95 (325)
T 3kex_A 18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL-DHAHIVRLLGLCP-GSSLQLVTQY 95 (325)
T ss_dssp EEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTC-CCTTBCCEEEEEC-BSSEEEEEEC
T ss_pred eeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEc-CCccEEEEEe
Confidence 478999999999999965 3443 7888775432 2335677899999999 9999999999886 5668899999
Q ss_pred CCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC
Q 006886 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 412 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~ 491 (627)
+++|+|.+++...+ ..+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 96 ~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 96 LPLGSLLDHVRQHR----GALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp CTTCBSHHHHHSSG----GGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred CCCCCHHHHHHHcc----ccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 99999999997542 36889999999999999999999998 999999999999999999999999999876433
Q ss_pred C------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006886 492 T------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 492 ~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
. ...++..|+|||++.+..++.++||||||+++|||++ |+.||....... +... ........ .+
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~----~~~~~~~~--~~ 239 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE---VPDL----LEKGERLA--QP 239 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH---HHHH----HHTTCBCC--CC
T ss_pred cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH---HHHH----HHcCCCCC--CC
Confidence 2 2335678999999998899999999999999999999 999998643221 1111 11111000 00
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006886 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~ 610 (627)
......+.+++.+||..+|++||++.|++++|+.+...
T Consensus 240 --------~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 240 --------QICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp --------TTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred --------CcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 01112456788899999999999999999999998654
No 88
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=5.5e-39 Score=340.19 Aligned_cols=246 Identities=19% Similarity=0.278 Sum_probs=190.6
Q ss_pred cccCcCCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEee----CCceEEEEecCCC
Q 006886 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS----KDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lv~e~~~~ 414 (627)
+.||+|+||.||++..+ +++.||||+++. ...+.+|++++.++.+||||+++++++.. ....++||||+++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~g 143 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 143 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCS
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCc----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCC
Confidence 57999999999999975 688999999863 34577888888777799999999999875 5568999999999
Q ss_pred CCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC---CCCeEEeecccccccCCC
Q 006886 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ---DLNGCISDVGLAHLINFP 491 (627)
Q Consensus 415 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~---~~~~ki~DfG~a~~~~~~ 491 (627)
|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 144 g~L~~~l~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~ 217 (400)
T 1nxk_A 144 GELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 217 (400)
T ss_dssp EEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCTTCEECC--
T ss_pred CcHHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEecccccccCCC
Confidence 99999997542 246899999999999999999999998 999999999999998 789999999999876432
Q ss_pred ---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCC-CHHHHHHHHhhhcccccccchhhh
Q 006886 492 ---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVV-DLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 492 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
....||+.|+|||++.+..++.++|||||||++|||++|+.||......... .....+ ...... ... .
T Consensus 218 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i---~~~~~~--~~~---~ 289 (400)
T 1nxk_A 218 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI---RMGQYE--FPN---P 289 (400)
T ss_dssp ---------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHH---HHTCCC--CCT---T
T ss_pred CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHH---HcCccc--CCC---c
Confidence 3445799999999999999999999999999999999999999865433221 111111 111100 000 0
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 006886 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQ 606 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~ 606 (627)
... ....++.+++.+||..||++|||+.|++++-.-
T Consensus 290 ~~~---~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~ 325 (400)
T 1nxk_A 290 EWS---EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 325 (400)
T ss_dssp TTT---TSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHH
T ss_pred ccc---cCCHHHHHHHHHHCCCChhHCcCHHHHhcCccc
Confidence 111 122356678889999999999999999986443
No 89
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=3.9e-39 Score=338.14 Aligned_cols=241 Identities=22% Similarity=0.333 Sum_probs=192.8
Q ss_pred cccCcCCceeEEEEEec-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCCH
Q 006886 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 417 (627)
+.||+|+||.||+|... +|+.||+|+++... ...+.+.+|++++.++ +||||+++++++...+..++||||+++|+|
T Consensus 95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL-DHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred eEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 67999999999999965 68999999987543 3456799999999999 999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe--cCCCCeEEeecccccccCCC---C
Q 006886 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL--TQDLNGCISDVGLAHLINFP---T 492 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl--~~~~~~ki~DfG~a~~~~~~---~ 492 (627)
.+++.... ..+++..++.++.|++.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++..... .
T Consensus 174 ~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~ 246 (373)
T 2x4f_A 174 FDRIIDES----YNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLK 246 (373)
T ss_dssp HHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCC
T ss_pred HHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccc
Confidence 99987542 35899999999999999999999998 9999999999999 56788999999999876543 2
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006886 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+....+... .. .....
T Consensus 247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~------~~~~~~~i~~~~~~~~--~~---~~~~~ 315 (373)
T 2x4f_A 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN------DAETLNNILACRWDLE--DE---EFQDI 315 (373)
T ss_dssp CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHTCCCSC--SG---GGTTS
T ss_pred cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhccCCCC--hh---hhccC
Confidence 3458999999999998899999999999999999999999997542 1222233332221110 00 01112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006886 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~ 602 (627)
..++.+++.+||..||.+|||+.|+++
T Consensus 316 ---~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 316 ---SEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp ---CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ---CHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 235667888999999999999999998
No 90
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=330.41 Aligned_cols=239 Identities=21% Similarity=0.315 Sum_probs=187.3
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc---------------------------CHHHHHHHHHHHHHhccCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---------------------------TKREFEQQMEVVGTIGKHS 390 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---------------------------~~~~~~~e~~~l~~l~~h~ 390 (627)
.+.||+|+||.||+|+.. +++.||||++..... ..+.+.+|++++.++ +||
T Consensus 18 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~ 96 (298)
T 2zv2_A 18 KDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKL-DHP 96 (298)
T ss_dssp EEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTC-CCT
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhC-CCC
Confidence 478999999999999965 688999999864321 124688999999999 999
Q ss_pred CeeeeeeEEee--CCceEEEEecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCC
Q 006886 391 NVVPVRAYYYS--KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSN 468 (627)
Q Consensus 391 niv~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~N 468 (627)
||+++++++.. .+..++||||+++|+|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+|
T Consensus 97 ~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~N 167 (298)
T 2zv2_A 97 NVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL------KPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKPSN 167 (298)
T ss_dssp TBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS------SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGG
T ss_pred CCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHH
Confidence 99999999986 5678999999999999876532 35899999999999999999999998 9999999999
Q ss_pred eEecCCCCeEEeecccccccCCC----CCCCCCccccCccccCCCC---CCCcchhHHHHHHHHHHHhCCCCCCCCCCCC
Q 006886 469 VLLTQDLNGCISDVGLAHLINFP----TTATRTIGYRAPEVTETRK---ASQKSDVYSFGVLLLEMLTGKAPLQHSGHDD 541 (627)
Q Consensus 469 ILl~~~~~~ki~DfG~a~~~~~~----~~~~~t~~y~aPE~~~~~~---~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~ 541 (627)
||++.++.+||+|||+++..... ....||+.|+|||++.+.. ++.++||||||+++|||++|+.||....
T Consensus 168 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~--- 244 (298)
T 2zv2_A 168 LLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER--- 244 (298)
T ss_dssp EEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS---
T ss_pred EEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc---
Confidence 99999999999999999876543 2346899999999997655 3788999999999999999999997532
Q ss_pred CCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 542 VVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
.......+...... ....... ..++.+++.+||+.||++|||+.|++++
T Consensus 245 ---~~~~~~~~~~~~~~-------~~~~~~~---~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 245 ---IMCLHSKIKSQALE-------FPDQPDI---AEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp ---HHHHHHHHHHCCCC-------CCSSSCC---CHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred ---HHHHHHHHhcccCC-------CCCcccc---CHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 11222211111100 0001112 2356678889999999999999999764
No 91
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=4.2e-39 Score=336.61 Aligned_cols=242 Identities=21% Similarity=0.330 Sum_probs=196.5
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||++..+ +++.||+|++..... ..+.+.+|++++..+ +||||+++++++.+.+..++||||+++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~lv~e~~~g 112 (362)
T 2bdw_A 34 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFHYLVFDLVTG 112 (362)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence 578999999999999975 689999999975432 235688999999999 999999999999999999999999999
Q ss_pred CCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC---CeEEeecccccccCCC
Q 006886 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL---NGCISDVGLAHLINFP 491 (627)
Q Consensus 415 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~---~~ki~DfG~a~~~~~~ 491 (627)
|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++ .+||+|||++......
T Consensus 113 g~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~ 184 (362)
T 2bdw_A 113 GELFEDIVAR-----EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184 (362)
T ss_dssp CBHHHHHTTC-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcceEecCC
Confidence 9999998753 35899999999999999999999998 99999999999998654 5999999999877543
Q ss_pred C---CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006886 492 T---TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 492 ~---~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
. ...||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+........ .+ .
T Consensus 185 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~------~~~~~~i~~~~~~~~--~~---~ 253 (362)
T 2bdw_A 185 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ------HRLYAQIKAGAYDYP--SP---E 253 (362)
T ss_dssp CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCCCC--TT---G
T ss_pred cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhCCCCCC--cc---c
Confidence 2 34689999999999998999999999999999999999999975321 122222221111000 00 0
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 569 YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
. .....++.+++.+||..||++|||+.|++++
T Consensus 254 ~---~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 254 W---DTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp G---GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred c---cCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 1112356678889999999999999999875
No 92
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.1e-39 Score=341.23 Aligned_cols=192 Identities=21% Similarity=0.342 Sum_probs=171.0
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHHHhc----cCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIG----KHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~----~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.. +++.||||+++......+.+..|++++..+. .||||+++++++...+..++||||+
T Consensus 40 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~- 118 (360)
T 3llt_A 40 IRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL- 118 (360)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-
T ss_pred EEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-
Confidence 478999999999999974 6889999999765555667888999999984 4999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC--------------------
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ-------------------- 473 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~-------------------- 473 (627)
+++|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.
T Consensus 119 ~~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~ 192 (360)
T 3llt_A 119 GPSLYEIITRNNY---NGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQ 192 (360)
T ss_dssp CCBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEE
T ss_pred CCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEccccccccccchhccccccccc
Confidence 9999999986532 35899999999999999999999998 999999999999975
Q ss_pred -----CCCeEEeecccccccCC-CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 006886 474 -----DLNGCISDVGLAHLINF-PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHS 537 (627)
Q Consensus 474 -----~~~~ki~DfG~a~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~ 537 (627)
++.+||+|||+++.... .....+|+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 193 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 262 (360)
T 3llt_A 193 IYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH 262 (360)
T ss_dssp EEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence 78999999999987644 34456899999999999999999999999999999999999999754
No 93
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.3e-41 Score=343.74 Aligned_cols=255 Identities=26% Similarity=0.397 Sum_probs=184.1
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHHHh-ccCCCeeeeeeEEeeCC----ceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTI-GKHSNVVPVRAYYYSKD----EKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l-~~h~niv~l~~~~~~~~----~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.. ++.||||++.. .....+..|.+++..+ .+||||+++++++.... ..++||||++
T Consensus 8 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~--~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 84 (303)
T 3gxj_A 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFSS--REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 84 (303)
T ss_dssp CEEEEECSSSEEEEC-CT-TSCEEEEECC---TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECCT
T ss_pred hhhccCCCCeEEEEEEEc-CcceEEEEecc--cchhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEeccC
Confidence 478999999999999875 88999999864 3456677888888773 39999999999998876 6899999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeeecCCCCCCeEecCCCCeEEeecccc
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH--------SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA 485 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a 485 (627)
+|+|.+++... .+++..++.++.|++.||.||| +.+ |+||||||+|||++.++.+||+|||++
T Consensus 85 ~g~L~~~l~~~------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nil~~~~~~~kl~DFg~a 155 (303)
T 3gxj_A 85 HGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp TCCHHHHHHHC------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCCCC-
T ss_pred CCCHHHHHhcc------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC---EeeCcCCHHHeEECCCCCEEEeecCcc
Confidence 99999999753 4788889999999999999999 776 999999999999999999999999999
Q ss_pred cccCCCC--------CCCCCccccCccccCCC------CCCCcchhHHHHHHHHHHHhC----------CCCCCCCCCCC
Q 006886 486 HLINFPT--------TATRTIGYRAPEVTETR------KASQKSDVYSFGVLLLEMLTG----------KAPLQHSGHDD 541 (627)
Q Consensus 486 ~~~~~~~--------~~~~t~~y~aPE~~~~~------~~~~~~Dv~S~Gvvl~el~tg----------~~p~~~~~~~~ 541 (627)
+...... ...||+.|+|||++.+. .++.++||||||+++|||++| +.||.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3gxj_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-C
T ss_pred eeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCC
Confidence 7664332 22589999999998765 334689999999999999999 66665432211
Q ss_pred CCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006886 542 VVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~ 611 (627)
.. ...... ....... .+.........+....+.+++.+||+.||++|||+.|+++.|+++.+.+
T Consensus 236 ~~-~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 236 PS-VEEMRK-VVCEQKL----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CC-CC-CHH-HHTTSCC----CCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred cc-HHHHHH-HHHHhhc----CCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 10 000111 1111111 1111111112355667889999999999999999999999999997654
No 94
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.2e-38 Score=329.81 Aligned_cols=254 Identities=25% Similarity=0.395 Sum_probs=203.2
Q ss_pred hcccCcCCceeEEEEEec--------CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEE
Q 006886 339 AEVLGKGSYGSTYKAILE--------DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~--------~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv 408 (627)
.+.||+|+||.||+|... ++..||||++..... ..+.+.+|++++.++.+||||+++++++...+..++|
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 119 (334)
T 2pvf_A 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 119 (334)
T ss_dssp EEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEE
T ss_pred eeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEE
Confidence 478999999999999863 467899999975432 3457889999999998999999999999999999999
Q ss_pred EecCCCCCHHHHhhhcCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCe
Q 006886 409 YSYMPAGSLFMLLHRNRSD-----------GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNG 477 (627)
Q Consensus 409 ~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ 477 (627)
|||+++|+|.+++...... ....+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+
T Consensus 120 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~ 196 (334)
T 2pvf_A 120 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVM 196 (334)
T ss_dssp EECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCE
T ss_pred EECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEEEcCCCCE
Confidence 9999999999999865321 1234899999999999999999999998 9999999999999999999
Q ss_pred EEeecccccccCCC------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHH
Q 006886 478 CISDVGLAHLINFP------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVR 550 (627)
Q Consensus 478 ki~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~ 550 (627)
||+|||+++..... ....+++.|+|||++.+..++.++||||||+++|||++ |+.||.... ......
T Consensus 197 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~------~~~~~~ 270 (334)
T 2pvf_A 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------VEELFK 270 (334)
T ss_dssp EECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC------HHHHHH
T ss_pred EEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC------HHHHHH
Confidence 99999999876432 22335778999999988889999999999999999999 999997542 112222
Q ss_pred HHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006886 551 SVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 551 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~~ 612 (627)
.+.... ... ........+.+++.+||..+|.+|||+.|+++.|+.+.....
T Consensus 271 ~~~~~~-~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 271 LLKEGH-RMD----------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp HHHHTC-CCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HHhcCC-CCC----------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 111111 100 001122356778889999999999999999999999876543
No 95
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=6.1e-39 Score=323.15 Aligned_cols=247 Identities=27% Similarity=0.467 Sum_probs=202.8
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCCHH
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 418 (627)
.+.||+|+||.||+|..+++..||+|++.......+.+.+|++++..+ +||||+++++++. .+..++||||+++|+|.
T Consensus 18 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~ 95 (279)
T 1qpc_A 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLVRLYAVVT-QEPIYIITEYMENGSLV 95 (279)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHC-CCTTBCCEEEEEC-SSSCEEEEECCTTCBHH
T ss_pred eeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhC-CCcCcceEEEEEc-CCCcEEEEecCCCCCHH
Confidence 478999999999999998888999999987666788899999999999 9999999999976 45688999999999999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-----C
Q 006886 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-----T 493 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~~-----~ 493 (627)
+++.... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++....... .
T Consensus 96 ~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 169 (279)
T 1qpc_A 96 DFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 169 (279)
T ss_dssp HHTTSHH---HHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTT
T ss_pred HHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccC
Confidence 9997532 125899999999999999999999998 9999999999999999999999999998764322 2
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006886 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
..++..|+|||++.+..++.++||||||+++|||++ |+.||..... .......... .... ...
T Consensus 170 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------~~~~~~~~~~-~~~~-------~~~-- 233 (279)
T 1qpc_A 170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLERG-YRMV-------RPD-- 233 (279)
T ss_dssp CCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH------HHHHHHHHTT-CCCC-------CCT--
T ss_pred CCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH------HHHHHHHhcc-cCCC-------Ccc--
Confidence 335678999999988889999999999999999999 9999975321 1112211111 1000 011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006886 573 EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~ 610 (627)
.....+.+++.+|++.+|++|||+.++++.|+++...
T Consensus 234 -~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 234 -NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp -TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -cccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 1123567788899999999999999999999998654
No 96
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=3.2e-39 Score=325.70 Aligned_cols=246 Identities=22% Similarity=0.373 Sum_probs=189.8
Q ss_pred hcccCcCCceeEEEEEecC----CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecC
Q 006886 339 AEVLGKGSYGSTYKAILED----GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~----~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~ 412 (627)
.+.||+|+||.||+|.... +..||+|++..... ..+.+.+|+.++..+ +||||+++++++. ++..++||||+
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-~~~~~lv~e~~ 97 (281)
T 1mp8_A 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKLIGVIT-ENPVWIIMELC 97 (281)
T ss_dssp EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred EeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCccceEEEEEc-cCccEEEEecC
Confidence 4789999999999999653 45799999875422 346788999999999 9999999999974 56788999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC
Q 006886 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT 492 (627)
Q Consensus 413 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~~ 492 (627)
++|+|.+++.... ..+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 98 ~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (281)
T 1mp8_A 98 TLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 170 (281)
T ss_dssp TTEEHHHHHHHTT----TTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred CCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECccccccccCccc
Confidence 9999999997642 35899999999999999999999998 9999999999999999999999999998764432
Q ss_pred -----CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhh
Q 006886 493 -----TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVEL 566 (627)
Q Consensus 493 -----~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 566 (627)
...+++.|+|||++.+..++.++||||||+++|||++ |+.||......+ . ...+...... .
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~---~---~~~i~~~~~~-~------ 237 (281)
T 1mp8_A 171 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---V---IGRIENGERL-P------ 237 (281)
T ss_dssp --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---H---HHHHHTTCCC-C------
T ss_pred ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH---H---HHHHHcCCCC-C------
Confidence 2235678999999988899999999999999999997 999997643221 1 1111111100 0
Q ss_pred hcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006886 567 LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 567 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~ 610 (627)
........+.+++.+||+.+|++|||+.|+++.|+++...
T Consensus 238 ----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 238 ----MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 0011223566788899999999999999999999998654
No 97
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.1e-38 Score=321.90 Aligned_cols=253 Identities=17% Similarity=0.202 Sum_probs=198.5
Q ss_pred hcccCcCCceeEEEEEe-cCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEE-eeCCceEEEEecCCCCC
Q 006886 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYY-YSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~-~~~~~~~lv~e~~~~g~ 416 (627)
.+.||+|+||.||+|+. .+++.||||++.... ..+.+.+|++++..+ +|++++..+.++ ...+..++||||+ +++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l-~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (296)
T 3uzp_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMM-QGGVGIPTIRWCGAEGDYNVMVMELL-GPS 90 (296)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEESCS-SCCHHHHHHHHHHHH-TTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc-chhHHHHHHHHHHHh-hcCCCCCccccccCCCCceEEEEEec-CCC
Confidence 47899999999999996 578999999986543 335688999999999 666655555544 5667789999999 999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe---cCCCCeEEeecccccccCCC--
Q 006886 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL---TQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl---~~~~~~ki~DfG~a~~~~~~-- 491 (627)
|.+++.... ..+++..++.++.|++.||.|||+++ |+||||||+|||+ +.++.+||+|||+++.....
T Consensus 91 L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 163 (296)
T 3uzp_A 91 LEDLFNFCS----RKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp HHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred HHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccc
Confidence 999997542 35899999999999999999999998 9999999999999 48899999999999876432
Q ss_pred ---------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006886 492 ---------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 492 ---------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
....+|+.|+|||++.+..++.++||||||+++|||++|+.||..............+.........
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---- 239 (296)
T 3uzp_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI---- 239 (296)
T ss_dssp CCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH----
T ss_pred ccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch----
Confidence 2345789999999999999999999999999999999999999875544333332222111100000
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006886 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~ 611 (627)
..+ ... ...++.+++.+||+.+|++|||+.++++.|+++....
T Consensus 240 -~~~--~~~---~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 282 (296)
T 3uzp_A 240 -EVL--CKG---YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp -HHH--TTT---SCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred -HHH--Hhh---CCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence 000 011 1235677888999999999999999999999986554
No 98
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.8e-39 Score=343.69 Aligned_cols=241 Identities=21% Similarity=0.300 Sum_probs=194.8
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.+ +++.||+|++.... ...+.+.+|++++..+ +||||+++++++.+.+..++||||++
T Consensus 74 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~lV~E~~~ 152 (410)
T 3v8s_A 74 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDDRYLYMVMEYMP 152 (410)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEEEEEeCCC
Confidence 478999999999999976 58899999986532 2334578899999999 99999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|.+++... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 153 gg~L~~~l~~~------~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~ 223 (410)
T 3v8s_A 153 GGDLVNLMSNY------DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 223 (410)
T ss_dssp TEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSE
T ss_pred CCcHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEeccceeEeeccCCc
Confidence 99999999753 3899999999999999999999998 999999999999999999999999999876543
Q ss_pred ---CCCCCCccccCccccCCCC----CCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006886 492 ---TTATRTIGYRAPEVTETRK----ASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 492 ---~~~~~t~~y~aPE~~~~~~----~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
.+..||+.|+|||++.+.. ++.++|||||||++|||++|+.||.... .......+........
T Consensus 224 ~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~------~~~~~~~i~~~~~~~~---- 293 (410)
T 3v8s_A 224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS------LVGTYSKIMNHKNSLT---- 293 (410)
T ss_dssp EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHTHHHHCC----
T ss_pred ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCC------hhhHHHHHHhcccccc----
Confidence 3566899999999987654 7899999999999999999999997532 2222222222110000
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 006886 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDS--RPKMDDVVRM 603 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~--RPs~~ev~~~ 603 (627)
.......+ .++.+++.+|+..+|.+ ||+++||+++
T Consensus 294 -~p~~~~~s---~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 294 -FPDDNDIS---KEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp -CCTTCCCC---HHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred -CCCccccc---HHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 00111122 34566777999999988 9999999875
No 99
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.1e-38 Score=331.47 Aligned_cols=243 Identities=22% Similarity=0.349 Sum_probs=198.1
Q ss_pred hcccCcCCceeEEEEEe-cCCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+. .+++.||||++..... ..+.+.+|++++.++ +||||+++++++...+..++||||++
T Consensus 59 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~ 137 (348)
T 1u5q_A 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTAWLVMEYCL 137 (348)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred eeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCeEEEEEecCC
Confidence 46799999999999996 4789999999865422 235688999999999 99999999999999999999999997
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCC
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTT 493 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~~~ 493 (627)
|+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 138 -g~l~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~ 209 (348)
T 1u5q_A 138 -GSASDLLEVHK----KPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS 209 (348)
T ss_dssp -EEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCC
T ss_pred -CCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecCCCCc
Confidence 68888886542 46899999999999999999999998 99999999999999999999999999988877667
Q ss_pred CCCCccccCccccC---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006886 494 ATRTIGYRAPEVTE---TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 494 ~~~t~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
..||+.|+|||++. ...++.++||||||+++|||++|+.||.... .............. .. ...
T Consensus 210 ~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~------~~~~~~~~~~~~~~-~~------~~~ 276 (348)
T 1u5q_A 210 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN------AMSALYHIAQNESP-AL------QSG 276 (348)
T ss_dssp CCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHSCCC-CC------CCT
T ss_pred ccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHhcCCC-CC------CCC
Confidence 78999999999983 5678999999999999999999999997532 12222222222111 00 011
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 006886 571 DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQ 606 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~ 606 (627)
..+ ..+.+++.+||+.+|++|||+++++++..-
T Consensus 277 ~~~---~~l~~li~~~l~~dP~~Rps~~~ll~h~~~ 309 (348)
T 1u5q_A 277 HWS---EYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 309 (348)
T ss_dssp TSC---HHHHHHHHHHTCSSGGGSCCHHHHTTCHHH
T ss_pred CCC---HHHHHHHHHHcccChhhCcCHHHHhhChhh
Confidence 112 345678889999999999999999876443
No 100
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=7e-39 Score=332.56 Aligned_cols=255 Identities=25% Similarity=0.392 Sum_probs=201.5
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHHHh-ccCCCeeeeeeEEeeCC----ceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTI-GKHSNVVPVRAYYYSKD----EKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l-~~h~niv~l~~~~~~~~----~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.. ++.||||++... ..+.+.+|.+++..+ .+||||+++++++.... ..++||||++
T Consensus 47 ~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~ 123 (342)
T 1b6c_B 47 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 123 (342)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEECGG--GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCT
T ss_pred EeeecCCCCcEEEEEEEc-CccEEEEEeCch--hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecC
Confidence 578999999999999985 899999998643 456778888888873 28999999999998776 7899999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeeecCCCCCCeEecCCCCeEEeecccc
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH--------SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA 485 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a 485 (627)
+|+|.+++... .+++..++.++.|++.||.||| +.+ |+||||||+|||++.++.+||+|||++
T Consensus 124 ~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~ 194 (342)
T 1b6c_B 124 HGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIADLGLA 194 (342)
T ss_dssp TCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCcHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEEECCCCCEEEEECCCc
Confidence 99999999753 4899999999999999999999 666 999999999999999999999999999
Q ss_pred cccCCC--------CCCCCCccccCccccCCCC------CCCcchhHHHHHHHHHHHhC----------CCCCCCCCCCC
Q 006886 486 HLINFP--------TTATRTIGYRAPEVTETRK------ASQKSDVYSFGVLLLEMLTG----------KAPLQHSGHDD 541 (627)
Q Consensus 486 ~~~~~~--------~~~~~t~~y~aPE~~~~~~------~~~~~Dv~S~Gvvl~el~tg----------~~p~~~~~~~~ 541 (627)
+..... ....+|+.|+|||++.+.. ++.++||||||+++|||++| +.||......+
T Consensus 195 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 274 (342)
T 1b6c_B 195 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 274 (342)
T ss_dssp EEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCc
Confidence 766432 2345789999999987652 33689999999999999999 77876543221
Q ss_pred CCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006886 542 VVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~ 611 (627)
.....+............ +. ......+....+.+++.+||+.+|++|||+.|++++|+++.+..
T Consensus 275 -~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 275 -PSVEEMRKVVCEQKLRPN-IP----NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp -CCHHHHHHHHTTSCCCCC-CC----GGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred -ccHHHHHHHHHHHHhCCC-Cc----ccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 122222222221111111 11 11112355667888999999999999999999999999997654
No 101
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=6.6e-39 Score=336.00 Aligned_cols=245 Identities=14% Similarity=0.183 Sum_probs=198.0
Q ss_pred hcccCcCCceeEEEEE------ecCCcEEEEEEecccccCHHHHHHHHHHHHHhc--cCCCeeeeeeEEeeCCceEEEEe
Q 006886 339 AEVLGKGSYGSTYKAI------LEDGTTVVVKRLREVAATKREFEQQMEVVGTIG--KHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~------~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~--~h~niv~l~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|. ..+++.||||++.. ....++..|++++..+. .|+||+.+++++...+..++|||
T Consensus 70 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e 147 (365)
T 3e7e_A 70 HHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKP--ANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGE 147 (365)
T ss_dssp EEEEEECSSEEEEEEEC-------CCCCEEEEEESS--CCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEEC
T ss_pred EEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCC--CChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEe
Confidence 4789999999999994 44688999999864 34667888888888883 28999999999999999999999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC-----------CCCeEE
Q 006886 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ-----------DLNGCI 479 (627)
Q Consensus 411 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~-----------~~~~ki 479 (627)
|+++|+|.+++...+......+++..++.++.|++.||+|||+.+ |+||||||+|||++. ++.+||
T Consensus 148 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl 224 (365)
T 3e7e_A 148 LYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDDEDDLSAGLAL 224 (365)
T ss_dssp CCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC------CTTEEE
T ss_pred ccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCccccccccCCEEE
Confidence 999999999998654434567999999999999999999999998 999999999999998 899999
Q ss_pred eecccccccCC------CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHh
Q 006886 480 SDVGLAHLINF------PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVV 553 (627)
Q Consensus 480 ~DfG~a~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 553 (627)
+|||+++.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 225 ~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~----------- 293 (365)
T 3e7e_A 225 IDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC----------- 293 (365)
T ss_dssp CCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE-----------
T ss_pred eeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce-----------
Confidence 99999975431 1344589999999999999999999999999999999999999864321100
Q ss_pred hhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCC-CCHHHHHHHHHhhccc
Q 006886 554 REEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSR-PKMDDVVRMIEQIQQP 610 (627)
Q Consensus 554 ~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~R-Ps~~ev~~~L~~~~~~ 610 (627)
.....+... ...+ .+.+++..|++.+|.+| |+++++.+.|+++...
T Consensus 294 -------~~~~~~~~~-~~~~---~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 294 -------KPEGLFRRL-PHLD---MWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp -------EECSCCTTC-SSHH---HHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred -------eechhcccc-CcHH---HHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 001111111 1123 34456678999999998 6888888888887654
No 102
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.4e-39 Score=329.45 Aligned_cols=253 Identities=23% Similarity=0.342 Sum_probs=192.7
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCC
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~---~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|+..+++.||+|++.... ...+.+.+|++++..+ +||||+++++++...+..++||||+++
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~- 84 (288)
T 1ob3_A 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKEL-KHSNIVKLYDVIHTKKRLVLVFEHLDQ- 84 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGC-CCTTBCCEEEEEECSSCEEEEEECCSE-
T ss_pred hhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhc-CCCCEeeeeeEEccCCeEEEEEEecCC-
Confidence 47899999999999999889999999986542 2346788999999999 899999999999999999999999975
Q ss_pred CHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----
Q 006886 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491 (627)
Q Consensus 416 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~---- 491 (627)
+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (288)
T 1ob3_A 85 DLKKLLDVCE----GGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY 157 (288)
T ss_dssp EHHHHHHTST----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred CHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCcccccc
Confidence 9999887542 35899999999999999999999998 999999999999999999999999999765432
Q ss_pred CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccc--------ccc
Q 006886 492 TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTA--------EVF 562 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 562 (627)
....+|+.|+|||++.+ ..++.++||||||+++|||++|+.||......+ ....+.......... ..+
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD---QLMRIFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp ----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred ccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHHCCCChhhchhhhccccc
Confidence 23457899999999876 458999999999999999999999997542111 111111111000000 000
Q ss_pred chhhhcCC------ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 563 DVELLKYQ------DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 563 d~~l~~~~------~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
++...... .......++.+++.+||+.||++|||++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 11100000 001122356678889999999999999999763
No 103
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.9e-38 Score=322.19 Aligned_cols=253 Identities=17% Similarity=0.199 Sum_probs=196.9
Q ss_pred hcccCcCCceeEEEEEe-cCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeE-EeeCCceEEEEecCCCCC
Q 006886 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAY-YYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~-~~~~~~~~lv~e~~~~g~ 416 (627)
.+.||+|+||.||+|+. .+++.||||++.... ....+..|++++..+ +|++++..+.. +...+..++||||+ +|+
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l-~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (296)
T 4hgt_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMM-QGGVGIPTIRWCGAEGDYNVMVMELL-GPS 90 (296)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHH-TTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred eeeecCCCCeEEEEEEEcCCCceEEEEeecccc-cchHHHHHHHHHHHh-cCCCCCCeeeeecCCCCceEEEEEcc-CCC
Confidence 47899999999999996 468899999865432 224578899999999 56665555544 46677789999999 999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe---cCCCCeEEeecccccccCCC--
Q 006886 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL---TQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl---~~~~~~ki~DfG~a~~~~~~-- 491 (627)
|.+++.... ..+++..++.++.|++.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++.....
T Consensus 91 L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~ 163 (296)
T 4hgt_A 91 LEDLFNFCS----RKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp HHHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred HHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence 999997542 35899999999999999999999998 9999999999999 78999999999999876432
Q ss_pred ---------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006886 492 ---------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 492 ---------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
....+|+.|+|||++.+..++.++||||||+++|||++|+.||..............+.........
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---- 239 (296)
T 4hgt_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI---- 239 (296)
T ss_dssp CCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH----
T ss_pred CccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh----
Confidence 2345789999999999999999999999999999999999999876544433332222111100000
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006886 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~ 611 (627)
... .... ...+.+++.+||+.+|++|||+.++++.|+++....
T Consensus 240 -~~~--~~~~---~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~ 282 (296)
T 4hgt_A 240 -EVL--CKGY---PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp -HHH--TTTS---CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred -hhh--hccC---CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Confidence 000 0111 235677888999999999999999999999987543
No 104
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.4e-39 Score=323.28 Aligned_cols=250 Identities=20% Similarity=0.312 Sum_probs=202.2
Q ss_pred cccCcCCceeEEEEEec---CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCC
Q 006886 340 EVLGKGSYGSTYKAILE---DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~---~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 414 (627)
+.||+|+||.||+|.+. ++..||||+++... ...+.+.+|++++..+ +||||+++++++ ..+..++||||+++
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~-~~~~~~lv~e~~~~ 93 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLIGVC-QAEALMLVMEMAGG 93 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEE-ESSSEEEEEECCTT
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhC-CCCCEeEEEEEe-cCCCcEEEEEeCCC
Confidence 48999999999999854 57789999997642 2356789999999999 999999999998 55678999999999
Q ss_pred CCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006886 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
|+|.+++... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 94 ~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 166 (287)
T 1u59_A 94 GPLHKFLVGK----REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY 166 (287)
T ss_dssp EEHHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred CCHHHHHHhC----CccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeeeccCcce
Confidence 9999999743 245899999999999999999999998 999999999999999999999999999876432
Q ss_pred ----CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhh
Q 006886 492 ----TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVEL 566 (627)
Q Consensus 492 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 566 (627)
....+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... .....+.... ...
T Consensus 167 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------~~~~~i~~~~-~~~------ 233 (287)
T 1u59_A 167 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP------EVMAFIEQGK-RME------ 233 (287)
T ss_dssp ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH------HHHHHHHTTC-CCC------
T ss_pred eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH------HHHHHHhcCC-cCC------
Confidence 12235788999999988889999999999999999998 99999754321 1111111111 000
Q ss_pred hcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccccccC
Q 006886 567 LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRNR 615 (627)
Q Consensus 567 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~~~~~ 615 (627)
........+.+++.+||..+|++||++.+++++|+++....-.+.
T Consensus 234 ----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~ 278 (287)
T 1u59_A 234 ----CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKV 278 (287)
T ss_dssp ----CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTC
T ss_pred ----CCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcc
Confidence 001122356778889999999999999999999999976655443
No 105
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-38 Score=326.90 Aligned_cols=247 Identities=21% Similarity=0.431 Sum_probs=195.4
Q ss_pred hcccCcCCceeEEEEEecC-----CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEec
Q 006886 339 AEVLGKGSYGSTYKAILED-----GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~-----~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||.||+|..+. +..||||+++.... ....+.+|++++..+ +||||+++++++...+..++||||
T Consensus 49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~ 127 (333)
T 1mqb_A 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF-SHHNIIRLEGVISKYKPMMIITEY 127 (333)
T ss_dssp EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEEEEEC
T ss_pred ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEecCCCcEEEEeC
Confidence 4789999999999998653 23599999875432 345688999999999 999999999999999999999999
Q ss_pred CCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC
Q 006886 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 412 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~ 491 (627)
+++|+|.+++... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 128 ~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 128 MENGALDKFLREK----DGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp CTTEEHHHHHHHT----TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred CCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 9999999999764 245899999999999999999999998 999999999999999999999999999876432
Q ss_pred C-------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006886 492 T-------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 492 ~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
. ...+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ......+.......
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~------~~~~~~~~~~~~~~---- 270 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN------HEVMKAINDGFRLP---- 270 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHHHTTCCCC----
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH------HHHHHHHHCCCcCC----
Confidence 1 1224678999999998899999999999999999999 9999975321 11111111111000
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006886 564 VELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~ 610 (627)
........+.+++.+||+.+|++||++.++++.|+++...
T Consensus 271 -------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 271 -------TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp -------CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred -------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0111223567788899999999999999999999998644
No 106
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=8.7e-39 Score=332.37 Aligned_cols=238 Identities=18% Similarity=0.223 Sum_probs=198.4
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+++.+ +|+.||+|++.... ...+.+.+|++++..+ +||||+++++++.+.+..++||||++
T Consensus 46 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 124 (350)
T 1rdq_E 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVA 124 (350)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCCEEEEEEcCCC
Confidence 478999999999999976 68999999986542 3456788999999999 99999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC-C
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-T 492 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~-~ 492 (627)
+|+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 125 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~ 196 (350)
T 1rdq_E 125 GGEMFSHLRRIG-----RFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196 (350)
T ss_dssp TCBHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceeccCCcc
Confidence 999999998652 4899999999999999999999998 999999999999999999999999999876543 3
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCCh
Q 006886 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDV 572 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 572 (627)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+...... + ...
T Consensus 197 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~------~~~~~~~i~~~~~~---~------p~~- 260 (350)
T 1rdq_E 197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ------PIQIYEKIVSGKVR---F------PSH- 260 (350)
T ss_dssp CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCC---C------CTT-
T ss_pred cccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC------HHHHHHHHHcCCCC---C------CCC-
Confidence 4568999999999999999999999999999999999999997532 12222222221110 0 011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 006886 573 EEEMVQMLQIALSCVAKVPDSRPK-----MDDVVRM 603 (627)
Q Consensus 573 ~~~~~~l~~l~~~Cl~~~p~~RPs-----~~ev~~~ 603 (627)
....+.+++.+||+.||.+||+ ++|++++
T Consensus 261 --~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 261 --FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp --CCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred --CCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 1234667888999999999998 8888764
No 107
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.2e-38 Score=334.97 Aligned_cols=193 Identities=26% Similarity=0.407 Sum_probs=169.6
Q ss_pred hcccCcC--CceeEEEEEec-CCcEEEEEEecccccC---HHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecC
Q 006886 339 AEVLGKG--SYGSTYKAILE-DGTTVVVKRLREVAAT---KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G--~~g~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~ 412 (627)
.+.||+| +||.||+|+.+ +++.||||++...... .+.+.+|+++++.+ +||||+++++++...+..++||||+
T Consensus 30 ~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 108 (389)
T 3gni_B 30 LTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF-NHPNIVPYRATFIADNELWVVTSFM 108 (389)
T ss_dssp EEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhC-CCCCCCcEeEEEEECCEEEEEEEcc
Confidence 4789999 99999999976 6899999999765332 35678899999999 8999999999999999999999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC---
Q 006886 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN--- 489 (627)
Q Consensus 413 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~--- 489 (627)
++|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||.+....
T Consensus 109 ~~~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~ 182 (389)
T 3gni_B 109 AYGSAKDLICTHF---MDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMISHG 182 (389)
T ss_dssp TTCBHHHHHHHTC---TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEECEETT
T ss_pred CCCCHHHHHhhhc---ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccceeecccc
Confidence 9999999998653 235899999999999999999999998 9999999999999999999999999876431
Q ss_pred --------CCCCCCCCccccCccccCC--CCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 006886 490 --------FPTTATRTIGYRAPEVTET--RKASQKSDVYSFGVLLLEMLTGKAPLQHSG 538 (627)
Q Consensus 490 --------~~~~~~~t~~y~aPE~~~~--~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~ 538 (627)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 241 (389)
T 3gni_B 183 QRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP 241 (389)
T ss_dssp EECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred ccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC
Confidence 1123357889999999987 678999999999999999999999997644
No 108
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=7.2e-39 Score=333.04 Aligned_cols=239 Identities=23% Similarity=0.320 Sum_probs=196.1
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccc----ccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV----AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~----~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+++.+ +++.||+|+++.. ....+.+..|..++..+.+||||+++++++.+.+..++||||++
T Consensus 25 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 104 (353)
T 2i0e_A 25 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 104 (353)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCC
Confidence 478999999999999976 4788999999754 23456788899998888789999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC---
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF--- 490 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~--- 490 (627)
+|+|.+++.... .+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 105 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 176 (353)
T 2i0e_A 105 GGDLMYHIQQVG-----RFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 176 (353)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCcccccccCCc
Confidence 999999998642 4899999999999999999999998 99999999999999999999999999986422
Q ss_pred -CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006886 491 -PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 491 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+...... + .
T Consensus 177 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~------~~~~~~~i~~~~~~---~------p 241 (353)
T 2i0e_A 177 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED------EDELFQSIMEHNVA---Y------P 241 (353)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCC---C------C
T ss_pred ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC------HHHHHHHHHhCCCC---C------C
Confidence 234568999999999999999999999999999999999999997532 12222222221110 0 0
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 006886 570 QDVEEEMVQMLQIALSCVAKVPDSRPK-----MDDVVRM 603 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs-----~~ev~~~ 603 (627)
... ..++.+++.+||..+|.+||+ ++|++++
T Consensus 242 ~~~---s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 242 KSM---SKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp TTS---CHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred CCC---CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 111 235667888999999999995 5777654
No 109
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=5.2e-39 Score=327.50 Aligned_cols=252 Identities=21% Similarity=0.334 Sum_probs=197.3
Q ss_pred hcccCcCCceeEEEEEe-----cCCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeC--CceEEEE
Q 006886 339 AEVLGKGSYGSTYKAIL-----EDGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSK--DEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-----~~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--~~~~lv~ 409 (627)
.+.||+|+||.||+|++ .+++.||+|++.... ...+.+.+|++++..+ +||||+++++++... ...++||
T Consensus 26 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~ 104 (302)
T 4e5w_A 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL-YHENIVKYKGICTEDGGNGIKLIM 104 (302)
T ss_dssp EEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTC-CCTTBCCEEEEEEC---CCEEEEE
T ss_pred hhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhC-CCCCeeeeeeEEecCCCceEEEEE
Confidence 47899999999999984 368899999987542 3457899999999999 899999999999876 6689999
Q ss_pred ecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006886 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||+++|+|.+++.... ..+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 105 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 105 EFLPSGSLKEYLPKNK----NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp ECCTTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EeCCCCcHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECccccccccc
Confidence 9999999999997543 35899999999999999999999998 9999999999999999999999999998764
Q ss_pred CCC-------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC--------CCCCCCHHHHHHHHhh
Q 006886 490 FPT-------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSG--------HDDVVDLPRWVRSVVR 554 (627)
Q Consensus 490 ~~~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~--------~~~~~~~~~~~~~~~~ 554 (627)
... ...+|..|+|||++.+..++.++||||||+++|||++|+.|+.... ................
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLK 257 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHH
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHh
Confidence 432 3346778999999988889999999999999999999999864321 0000000000000010
Q ss_pred hcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhc
Q 006886 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQ 608 (627)
Q Consensus 555 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~ 608 (627)
... ...........+.+++.+||+.||.+|||+.|+++.|+++.
T Consensus 258 ~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 258 EGK----------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp TTC----------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccC----------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 000 00011122345778888999999999999999999999875
No 110
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.2e-38 Score=327.10 Aligned_cols=249 Identities=20% Similarity=0.291 Sum_probs=192.7
Q ss_pred cccCcCCceeEEEEEec-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCCH
Q 006886 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 417 (627)
+.||+|+||.||+|... +++.||||++.... ...+.+.+|++++.++.+||||+++++++.+.+..++||||+++|+|
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 98 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI 98 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcH
Confidence 57999999999999954 68999999997543 34678999999999976899999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC---eEEeecccccccCCC---
Q 006886 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN---GCISDVGLAHLINFP--- 491 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~---~ki~DfG~a~~~~~~--- 491 (627)
.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||++......
T Consensus 99 ~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 170 (316)
T 2ac3_A 99 LSHIHKR-----RHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC 170 (316)
T ss_dssp HHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC--------
T ss_pred HHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcc
Confidence 9999865 35899999999999999999999998 999999999999998776 999999998765321
Q ss_pred --------CCCCCCccccCccccCC-----CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCH--------HHHHH
Q 006886 492 --------TTATRTIGYRAPEVTET-----RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL--------PRWVR 550 (627)
Q Consensus 492 --------~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~--------~~~~~ 550 (627)
....||+.|+|||++.+ ..++.++||||||+++|||++|+.||......+.... .....
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 250 (316)
T 2ac3_A 171 SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLF 250 (316)
T ss_dssp -----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHH
T ss_pred ccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHH
Confidence 12347899999999864 4578999999999999999999999986543321100 00011
Q ss_pred HHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 551 SVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 551 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
........ ...+... . .....+.+++.+||..||++|||+.|++++
T Consensus 251 ~~i~~~~~-~~~~~~~---~---~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 251 ESIQEGKY-EFPDKDW---A---HISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHCCC-CCCHHHH---T---TSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHhccCc-ccCchhc---c---cCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 11111100 0000000 0 112356778889999999999999999874
No 111
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-38 Score=322.62 Aligned_cols=252 Identities=25% Similarity=0.377 Sum_probs=198.2
Q ss_pred hcccCcCCceeEEEEEecC-C---cEEEEEEeccccc--CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCce-EEEEec
Q 006886 339 AEVLGKGSYGSTYKAILED-G---TTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEK-LVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~-~---~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~-~lv~e~ 411 (627)
.+.||+|+||.||+|.+.+ + ..||+|++..... ..+.+.+|++++..+ +||||+++++++.+.+.. ++|+||
T Consensus 26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~v~e~ 104 (298)
T 3pls_A 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGL-NHPNVLALIGIMLPPEGLPHVLLPY 104 (298)
T ss_dssp EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSSSCCEEEECC
T ss_pred CceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEecCCCCcEEEEec
Confidence 4789999999999998542 2 3799999875432 346788999999999 999999999999876665 899999
Q ss_pred CCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC-
Q 006886 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF- 490 (627)
Q Consensus 412 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~- 490 (627)
+.+|+|.+++... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 105 ~~~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 105 MCHGDLLQFIRSP----QRNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp CTTCBHHHHHHCT----TCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred ccCCCHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 9999999999753 246899999999999999999999998 99999999999999999999999999975532
Q ss_pred -------CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006886 491 -------PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 491 -------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
.....+++.|+|||.+.+..++.++||||||+++|||++|..|+..... ...+.... . ......
T Consensus 178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~--~~~~~~~~---~-~~~~~~--- 248 (298)
T 3pls_A 178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID--PFDLTHFL---A-QGRRLP--- 248 (298)
T ss_dssp GGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC--GGGHHHHH---H-TTCCCC---
T ss_pred cccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC--HHHHHHHh---h-cCCCCC---
Confidence 1223467889999999999999999999999999999996665443211 11111111 1 111000
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccccc
Q 006886 564 VELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRN 614 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~~~~ 614 (627)
.. ......+.+++.+||+.+|.+|||+.++++.|+++...-...
T Consensus 249 ----~~---~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~ 292 (298)
T 3pls_A 249 ----QP---EYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD 292 (298)
T ss_dssp ----CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSC
T ss_pred ----CC---ccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhcc
Confidence 00 111235677888999999999999999999999987664443
No 112
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.7e-39 Score=331.74 Aligned_cols=247 Identities=21% Similarity=0.394 Sum_probs=193.7
Q ss_pred hcccCcCCceeEEEEEec-CCcE----EEEEEeccc--ccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEec
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTT----VVVKRLREV--AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~----vavK~l~~~--~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||.||+|+.. +++. ||+|.+... ....+.+.+|++++..+ +||||+++++++.... .++|+||
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~-~~~v~~~ 97 (327)
T 3lzb_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTST-VQLITQL 97 (327)
T ss_dssp EEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTC-CBTTBCCCCEEEESSS-EEEEECC
T ss_pred EEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhC-CCCCeeEEEEEEecCC-ceEEEEe
Confidence 478999999999999964 4443 577777543 23567899999999999 8999999999998654 7899999
Q ss_pred CCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC
Q 006886 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 412 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~ 491 (627)
+++|+|.+++.... ..+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 98 ~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~ 170 (327)
T 3lzb_A 98 MPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp CSSCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred cCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence 99999999998653 35899999999999999999999998 999999999999999999999999999876432
Q ss_pred C------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006886 492 T------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 492 ~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
. ...+|+.|+|||++.+..++.++||||||+++|||++ |+.||....... +.. ........
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~~----~~~~~~~~----- 238 (327)
T 3lzb_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISS----ILEKGERL----- 238 (327)
T ss_dssp ---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHH----HHHTTCCC-----
T ss_pred cccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HHH----HHHcCCCC-----
Confidence 1 2235678999999999999999999999999999999 999997643221 111 11111100
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006886 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~ 611 (627)
........++.+++.+||..+|.+||++.|+++.|+++....
T Consensus 239 -----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 280 (327)
T 3lzb_A 239 -----PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp -----CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred -----CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence 001112235677888999999999999999999999987543
No 113
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=8e-39 Score=356.60 Aligned_cols=244 Identities=20% Similarity=0.324 Sum_probs=198.0
Q ss_pred ccCcCCceeEEEEEec---CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCC
Q 006886 341 VLGKGSYGSTYKAILE---DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 341 ~lg~G~~g~Vy~~~~~---~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 415 (627)
.||+|+||.||+|.++ ++..||||+++... ...+++.+|++++..+ +||||+++++++.. +..++||||+++|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l-~hpniv~l~~~~~~-~~~~lv~E~~~~g 420 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPYIVRLIGVCQA-EALMLVMEMAGGG 420 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTC-CCTTBCCEEEEEES-SSEEEEEECCTTC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhC-CCCCEeeEEEEecc-CCeEEEEEeCCCC
Confidence 6999999999999864 45679999997643 3567899999999999 99999999999876 5689999999999
Q ss_pred CHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC---
Q 006886 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT--- 492 (627)
Q Consensus 416 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~~--- 492 (627)
+|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 421 ~L~~~l~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 493 (613)
T 2ozo_A 421 PLHKFLVGK----REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYY 493 (613)
T ss_dssp BHHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC------
T ss_pred cHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCcee
Confidence 999999754 246999999999999999999999998 9999999999999999999999999998764321
Q ss_pred ----CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006886 493 ----TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 493 ----~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
...+++.|+|||++.+..++.++|||||||++|||++ |+.||...... .....+. ......
T Consensus 494 ~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~------~~~~~i~-~~~~~~------- 559 (613)
T 2ozo_A 494 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP------EVMAFIE-QGKRME------- 559 (613)
T ss_dssp --------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH------HHHHHHH-TTCCCC-------
T ss_pred eeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH------HHHHHHH-cCCCCC-------
Confidence 1224578999999998899999999999999999998 99999864322 1111111 111100
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006886 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~ 610 (627)
.......++.+++.+||+.+|++||++.+|++.|+.+...
T Consensus 560 ---~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 599 (613)
T 2ozo_A 560 ---CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 599 (613)
T ss_dssp ---CCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred ---CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 0112234677788899999999999999999999998644
No 114
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-38 Score=335.24 Aligned_cols=243 Identities=20% Similarity=0.360 Sum_probs=197.1
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 416 (627)
.+.||+|+||.||+|..+ +++.||+|++.... .....+.+|++++..+ +||||+++++++.+.+..++||||+++|+
T Consensus 56 ~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~lv~E~~~gg~ 134 (387)
T 1kob_A 56 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL-HHPKLINLHDAFEDKYEMVLILEFLSGGE 134 (387)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-CSTTBCCEEEEEECSSEEEEEEECCCCCB
T ss_pred EEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhC-CCcCCCeEEEEEEeCCEEEEEEEcCCCCc
Confidence 478999999999999975 68899999986543 2345788999999999 99999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC--CCCeEEeecccccccCCCC--
Q 006886 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ--DLNGCISDVGLAHLINFPT-- 492 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~--~~~~ki~DfG~a~~~~~~~-- 492 (627)
|.+++... ...+++..++.++.|++.||.|||+.+ |+||||||+|||++. ++.+||+|||+++......
T Consensus 135 L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~ 207 (387)
T 1kob_A 135 LFDRIAAE----DYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 207 (387)
T ss_dssp HHHHTTCT----TCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred HHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceecCCCcce
Confidence 99998753 235899999999999999999999998 999999999999974 4779999999998775432
Q ss_pred -CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006886 493 -TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 493 -~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
...+|+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+....+. ++.. ...
T Consensus 208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~------~~~~~~~i~~~~~~---~~~~--~~~- 275 (387)
T 1kob_A 208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED------DLETLQNVKRCDWE---FDED--AFS- 275 (387)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS------HHHHHHHHHHCCCC---CCSS--TTT-
T ss_pred eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCC---CCcc--ccc-
Confidence 2358999999999999999999999999999999999999997532 11222222221111 0100 011
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
....++.+++.+||..||++|||+.|++++
T Consensus 276 --~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 276 --SVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp --TSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred --cCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 122356678889999999999999999874
No 115
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.5e-39 Score=335.38 Aligned_cols=251 Identities=25% Similarity=0.424 Sum_probs=192.2
Q ss_pred hcccCcCCceeEEEEEecC--C--cEEEEEEeccccc--CHHHHHHHHHHHHHhccCCCeeeeeeEEee-CCceEEEEec
Q 006886 339 AEVLGKGSYGSTYKAILED--G--TTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYS-KDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~--~--~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~-~~~~~lv~e~ 411 (627)
.+.||+|+||.||+|.+.+ + ..||||.++.... ..+.+.+|++++.++ +||||+++++++.. ++..++||||
T Consensus 94 ~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~lv~e~ 172 (373)
T 3c1x_A 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPY 172 (373)
T ss_dssp EEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTC-CCTTBCCCCEEECCCSSCCEEEEEC
T ss_pred CcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCCCeEEEEEC
Confidence 4689999999999998642 2 3689999865432 346789999999999 89999999998765 4577899999
Q ss_pred CCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC
Q 006886 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 412 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~ 491 (627)
+++|+|.+++... ...+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 173 ~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 173 MKHGDLRNFIRNE----THNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp CTTCBHHHHHHCT----TCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred CCCCCHHHHHhhc----ccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeecccccccccc
Confidence 9999999999754 235889999999999999999999998 999999999999999999999999999865322
Q ss_pred --------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006886 492 --------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 492 --------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
....+++.|+|||++.+..++.++||||||+++|||++ |.+||...... +....+ ..... ..
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~---~~~~~~---~~~~~---~~ 316 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF---DITVYL---LQGRR---LL 316 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS---CHHHHH---HTTCC---CC
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH---HHHHHH---HcCCC---CC
Confidence 12235678999999998999999999999999999999 67777654332 222111 11110 00
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccccc
Q 006886 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRN 614 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~~~~ 614 (627)
. .. .....+.+++.+||+.+|++|||+.|+++.|+++...-...
T Consensus 317 ~-----p~---~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~ 360 (373)
T 3c1x_A 317 Q-----PE---YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 360 (373)
T ss_dssp C-----CT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred C-----CC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcccc
Confidence 0 11 12235677888999999999999999999999987655444
No 116
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=331.52 Aligned_cols=242 Identities=19% Similarity=0.316 Sum_probs=182.6
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCCH
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 417 (627)
.+.||+|+||.||+|+.+ +++.||||+++... ..+.+.+|++++.++ +||||+++++++...+..++||||+++|+|
T Consensus 58 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 135 (349)
T 2w4o_A 58 ESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRL-SHPNIIKLKEIFETPTEISLVLELVTGGEL 135 (349)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhC-CCCCCcceeeeEecCCeEEEEEEeCCCCCH
Confidence 478999999999999976 57899999987543 456688999999999 899999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC---CCCeEEeecccccccCCC---
Q 006886 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ---DLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~---~~~~ki~DfG~a~~~~~~--- 491 (627)
.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 136 ~~~l~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~ 207 (349)
T 2w4o_A 136 FDRIVEK-----GYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLM 207 (349)
T ss_dssp HHHHTTC-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC-----------
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCccccccCccccc
Confidence 9999753 35899999999999999999999998 999999999999976 899999999999876443
Q ss_pred CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006886 492 TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ......+...... ...+ .
T Consensus 208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~~~~i~~~~~~--~~~~------~ 274 (349)
T 2w4o_A 208 KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD-----QFMFRRILNCEYY--FISP------W 274 (349)
T ss_dssp -----CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH-----HHHHHHHHTTCCC--CCTT------T
T ss_pred ccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc-----HHHHHHHHhCCCc--cCCc------h
Confidence 2445899999999999999999999999999999999999999753221 1111222211110 0000 0
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
......++.+++.+||..||++|||+.|++++
T Consensus 275 ~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 275 WDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11122356678889999999999999999873
No 117
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2e-38 Score=321.77 Aligned_cols=251 Identities=20% Similarity=0.291 Sum_probs=191.5
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||+||+|..+ +++.||+|++..... ..+.+.+|++++.++ +||||+++++++.+++..++||||+++
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 85 (292)
T 3o0g_A 7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLTLVFEFCDQ 85 (292)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcC-CCCCEeeEEeEEEeCCEEEEEEecCCC
Confidence 478999999999999975 689999999975432 246788999999999 899999999999999999999999976
Q ss_pred CCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006886 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
++.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 86 -~l~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 157 (292)
T 3o0g_A 86 -DLKKYFDSCN----GDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC 157 (292)
T ss_dssp -EHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSC
T ss_pred -CHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCCcccc
Confidence 6666665432 35899999999999999999999998 999999999999999999999999999876432
Q ss_pred -CCCCCCccccCccccCCCC-CCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhh---ccccc---ccc
Q 006886 492 -TTATRTIGYRAPEVTETRK-ASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVRE---EWTAE---VFD 563 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~-~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~d 563 (627)
....+|+.|+|||++.+.. ++.++||||||+++|||++|..||.... ........+... ..... ...
T Consensus 158 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~ 232 (292)
T 3o0g_A 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN-----DVDDQLKRIFRLLGTPTEEQWPSMTK 232 (292)
T ss_dssp CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCS-----SHHHHHHHHHHHHCCCCTTTCTTGGG
T ss_pred ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCC-----CHHHHHHHHHHHhCCCChhhhhhhcc
Confidence 3345789999999987765 7999999999999999999988864322 111222221110 00000 000
Q ss_pred -h----------hhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 564 -V----------ELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 564 -~----------~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
+ ........+.....+.+++.+|++.||++|||++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp STTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0 000000011123456678889999999999999999763
No 118
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.4e-38 Score=328.15 Aligned_cols=238 Identities=20% Similarity=0.327 Sum_probs=187.8
Q ss_pred hcccCcCCceeEEEEEe----cCCcEEEEEEecccc-----cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEE
Q 006886 339 AEVLGKGSYGSTYKAIL----EDGTTVVVKRLREVA-----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~----~~~~~vavK~l~~~~-----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~ 409 (627)
.+.||+|+||.||+++. .+++.||+|+++... .....+.+|++++..+ +||||+++++++...+..++||
T Consensus 22 ~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~ 100 (327)
T 3a62_A 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV-KHPFIVDLIYAFQTGGKLYLIL 100 (327)
T ss_dssp EEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHC-CCTTBCCEEEEEECSSCEEEEE
T ss_pred EEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhC-CCCCccceeEEEEcCCEEEEEE
Confidence 47899999999999996 478999999987542 2345678899999999 8999999999999999999999
Q ss_pred ecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006886 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||+++|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 101 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 172 (327)
T 3a62_A 101 EYLSGGELFMQLERE-----GIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172 (327)
T ss_dssp ECCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred eCCCCCcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence 999999999999764 35889999999999999999999998 9999999999999999999999999997643
Q ss_pred C----CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchh
Q 006886 490 F----PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVE 565 (627)
Q Consensus 490 ~----~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 565 (627)
. .....||+.|+|||++.+..++.++||||||+++|||++|+.||.... .......+...... +
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~i~~~~~~---~--- 240 (327)
T 3a62_A 173 HDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN------RKKTIDKILKCKLN---L--- 240 (327)
T ss_dssp ------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHTCCC---C---
T ss_pred cCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhCCCC---C---
Confidence 2 234468999999999999899999999999999999999999997532 11222222221100 0
Q ss_pred hhcCCChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 006886 566 LLKYQDVEEEMVQMLQIALSCVAKVPDSRP-----KMDDVVRM 603 (627)
Q Consensus 566 l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RP-----s~~ev~~~ 603 (627)
... ....+.+++.+||..+|++|| ++.|++++
T Consensus 241 ---p~~---~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 241 ---PPY---LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp ---CTT---SCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred ---CCC---CCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 011 123566788899999999999 77788763
No 119
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=8.6e-39 Score=326.98 Aligned_cols=255 Identities=21% Similarity=0.305 Sum_probs=192.5
Q ss_pred hcccCcCCceeEEEEEe-cCCcEEEEEEecccc------cCHHHHHHHHHHHHHhc--cCCCeeeeeeEEeeCC-----c
Q 006886 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVA------ATKREFEQQMEVVGTIG--KHSNVVPVRAYYYSKD-----E 404 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~------~~~~~~~~e~~~l~~l~--~h~niv~l~~~~~~~~-----~ 404 (627)
.+.||+|+||+||+|+. .+++.||||++.... .....+.+|++++..+. +||||+++++++.... .
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~ 93 (308)
T 3g33_A 14 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIK 93 (308)
T ss_dssp EEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEE
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCcee
Confidence 47899999999999996 468999999986432 12356778888887774 4999999999998765 4
Q ss_pred eEEEEecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccc
Q 006886 405 KLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGL 484 (627)
Q Consensus 405 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~ 484 (627)
.++||||+. |+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 94 ~~lv~e~~~-~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 166 (308)
T 3g33_A 94 VTLVFEHVD-QDLRTYLDKAP---PPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL 166 (308)
T ss_dssp EEEEEECCC-CBHHHHHHTCC---TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCEEECSCSC
T ss_pred EEEEehhhh-cCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEEeeCcc
Confidence 789999997 59999998653 234899999999999999999999998 99999999999999999999999999
Q ss_pred ccccCCCC---CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhh----hcc
Q 006886 485 AHLINFPT---TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVR----EEW 557 (627)
Q Consensus 485 a~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~----~~~ 557 (627)
++...... ...+|+.|+|||++.+..++.++|||||||++|||++|+.||......+ ....+..... ..+
T Consensus 167 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~ 243 (308)
T 3g33_A 167 ARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD---QLGKIFDLIGLPPEDDW 243 (308)
T ss_dssp TTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH---HHHHHHHHHCCCCTTTS
T ss_pred ccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCChhhc
Confidence 98765432 3457899999999988899999999999999999999999997543211 1111111110 000
Q ss_pred ccccc--chhhhc--CCC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 558 TAEVF--DVELLK--YQD----VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 558 ~~~~~--d~~l~~--~~~----~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
..... ...+.. ... .++....+.+++.+|++.||++|||+.|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 244 PRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 00000 000000 000 01122456778889999999999999999763
No 120
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.7e-38 Score=346.99 Aligned_cols=244 Identities=23% Similarity=0.316 Sum_probs=198.9
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccc----ccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV----AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~----~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.+ +|+.||+|++... ......+.+|++++..+ +||||+++++++.+.+..++||||++
T Consensus 189 ~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~~l~lVmEy~~ 267 (576)
T 2acx_A 189 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVLTLMN 267 (576)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHc-CCCCEeeEEEEEeeCCEEEEEEEcCC
Confidence 378999999999999975 6899999999653 23456788999999999 99999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|..++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 268 gg~L~~~l~~~~---~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~ 341 (576)
T 2acx_A 268 GGDLKFHIYHMG---QAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341 (576)
T ss_dssp SCBHHHHHHSSS---SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred CCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceecccCcc
Confidence 999999997542 235899999999999999999999998 999999999999999999999999999876543
Q ss_pred -CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006886 492 -TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
....||+.|+|||++.+..++.++|||||||++|||++|+.||....... .... +......... .+. .
T Consensus 342 ~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~--~~~~-i~~~i~~~~~--~~p------~ 410 (576)
T 2acx_A 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI--KREE-VERLVKEVPE--EYS------E 410 (576)
T ss_dssp EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC--CHHH-HHHHHHHCCC--CCC------T
T ss_pred ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch--hHHH-HHHHhhcccc--cCC------c
Confidence 23468999999999999899999999999999999999999998643321 1111 1111111100 000 1
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 006886 571 DVEEEMVQMLQIALSCVAKVPDSRP-----KMDDVVRM 603 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~p~~RP-----s~~ev~~~ 603 (627)
.. ..++.+++.+||..||.+|| +++|++++
T Consensus 411 ~~---s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 411 RF---SPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp TS---CHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred cC---CHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 11 23566788899999999999 78888764
No 121
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=336.82 Aligned_cols=267 Identities=16% Similarity=0.248 Sum_probs=208.7
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCC--ceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD--EKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~--~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|++++.++ +||||+++++++...+ ..++||||++
T Consensus 14 ~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~~lv~e~~~ 92 (396)
T 4eut_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKNIVKLFAIEEETTTRHKVLIMEFCP 92 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECTTTCCEEEEECCCT
T ss_pred EEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhc-CCCCCCeEEEeeccCCCCeeEEEEecCC
Confidence 478999999999999976 48999999997543 3467788999999999 8999999999998765 6799999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe----cCCCCeEEeecccccccC
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL----TQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl----~~~~~~ki~DfG~a~~~~ 489 (627)
+|+|.+++..... ...+++..++.++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++...
T Consensus 93 ~g~L~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~ 167 (396)
T 4eut_A 93 CGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (396)
T ss_dssp TEEHHHHTTSGGG--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred CCCHHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence 9999999976432 234899999999999999999999998 9999999999999 778889999999998764
Q ss_pred CC---CCCCCCccccCccccCC--------CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006886 490 FP---TTATRTIGYRAPEVTET--------RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 490 ~~---~~~~~t~~y~aPE~~~~--------~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
.. ....||+.|+|||++.+ ..++.++||||||+++|||++|+.||........ .......+......
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~--~~~~~~~~~~~~p~ 245 (396)
T 4eut_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR--NKEVMYKIITGKPS 245 (396)
T ss_dssp CGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTT--CHHHHHHHHHSCCT
T ss_pred CCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccc--hHHHHHHHhcCCCc
Confidence 43 23458999999999864 4677899999999999999999999975433221 12222222222111
Q ss_pred ccc---c---------chhhh-cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccccc
Q 006886 559 AEV---F---------DVELL-KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELR 613 (627)
Q Consensus 559 ~~~---~---------d~~l~-~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~~~ 613 (627)
... . ..... ...........+.+++.+||+.||++||++.|+++.++++....+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~~~ 313 (396)
T 4eut_A 246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRMVI 313 (396)
T ss_dssp TCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCEEE
T ss_pred ccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhceEE
Confidence 000 0 00000 0112245556777899999999999999999999999998776543
No 122
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=8.8e-39 Score=327.93 Aligned_cols=254 Identities=26% Similarity=0.379 Sum_probs=202.1
Q ss_pred hcccCcCCceeEEEEEe------cCCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCC-ceEEEE
Q 006886 339 AEVLGKGSYGSTYKAIL------EDGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD-EKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~------~~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~-~~~lv~ 409 (627)
.+.||+|+||.||+|+. .+++.||||++..... ..+.+.+|++++.++.+||||+++++++...+ ..++||
T Consensus 32 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~ 111 (316)
T 2xir_A 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 111 (316)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEE
T ss_pred eeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEE
Confidence 47899999999999984 2467899999976432 34578899999999988999999999988755 489999
Q ss_pred ecCCCCCHHHHhhhcCCCC-----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeE
Q 006886 410 SYMPAGSLFMLLHRNRSDG-----------GTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGC 478 (627)
Q Consensus 410 e~~~~g~L~~~l~~~~~~~-----------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~k 478 (627)
||+++|+|.+++....... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+|
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~k 188 (316)
T 2xir_A 112 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVK 188 (316)
T ss_dssp ECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEE
T ss_pred EcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEE
Confidence 9999999999998653210 123889999999999999999999998 99999999999999999999
Q ss_pred EeecccccccCCCC------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHH
Q 006886 479 ISDVGLAHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRS 551 (627)
Q Consensus 479 i~DfG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~ 551 (627)
|+|||+++...... ...+|+.|+|||++.+..++.++||||||+++|||++ |+.||....... ....
T Consensus 189 l~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~------~~~~ 262 (316)
T 2xir_A 189 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFCR 262 (316)
T ss_dssp ECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH------HHHH
T ss_pred ECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH------HHHH
Confidence 99999998764332 2235778999999988899999999999999999998 999997543221 1111
Q ss_pred HhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006886 552 VVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 552 ~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~ 611 (627)
.......... . ......+.+++.+||+.+|.+|||+.|++++|+.+.+..
T Consensus 263 ~~~~~~~~~~-------~---~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 263 RLKEGTRMRA-------P---DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp HHHHTCCCCC-------C---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HhccCccCCC-------C---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 1111111100 0 111235677888999999999999999999999987653
No 123
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=3.5e-38 Score=333.04 Aligned_cols=241 Identities=18% Similarity=0.286 Sum_probs=191.1
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEeccccc---CHHHHHHHHHHHHHhcc-CCCeeeeeeEEeeCCceEEEEecCCC
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAA---TKREFEQQMEVVGTIGK-HSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~-h~niv~l~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||++...+++.||||++..... ..+.+.+|++++..+.. ||||+++++++...+..++||| +.+
T Consensus 61 ~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~ 139 (390)
T 2zmd_A 61 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 139 (390)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCS
T ss_pred EEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCC
Confidence 478999999999999988899999999865432 34678999999999954 6999999999999999999999 568
Q ss_pred CCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006886 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++ ++.+||+|||+++.....
T Consensus 140 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 210 (390)
T 2zmd_A 140 IDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 210 (390)
T ss_dssp EEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc
Confidence 8999999864 25889999999999999999999998 99999999999995 589999999999876432
Q ss_pred ---CCCCCCccccCccccCC-----------CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcc
Q 006886 492 ---TTATRTIGYRAPEVTET-----------RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEW 557 (627)
Q Consensus 492 ---~~~~~t~~y~aPE~~~~-----------~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 557 (627)
....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... .....+........
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-----~~~~~~~~~~~~~~ 285 (390)
T 2zmd_A 211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----NQISKLHAIIDPNH 285 (390)
T ss_dssp ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-----CHHHHHHHHHCTTS
T ss_pred ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh-----HHHHHHHHHhCccc
Confidence 23458999999999864 468899999999999999999999997432 11222222221111
Q ss_pred cccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006886 558 TAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMI 604 (627)
Q Consensus 558 ~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L 604 (627)
.... .... ..++.+++.+||..||++|||+.|++++-
T Consensus 286 ~~~~-------~~~~---~~~~~~li~~~L~~dP~~Rps~~ell~hp 322 (390)
T 2zmd_A 286 EIEF-------PDIP---EKDLQDVLKCCLKRDPKQRISIPELLAHP 322 (390)
T ss_dssp CCCC-------CCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred cCCC-------Cccc---hHHHHHHHHHHcccChhhCCCHHHHhhCc
Confidence 1000 0111 23566788899999999999999998753
No 124
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=9.7e-39 Score=356.80 Aligned_cols=243 Identities=22% Similarity=0.316 Sum_probs=196.7
Q ss_pred cccCcCCceeEEEEEec---CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 340 EVLGKGSYGSTYKAILE---DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~---~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
+.||+|+||.||+|.+. .++.||||+++.... ..+++.+|++++.++ +||||+++++++. .+..++||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~-~~~~~lv~E~~~ 452 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRMIGICE-AESWMLVMEMAE 452 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHC-CCTTBCCEEEEEE-SSSEEEEEECCT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEe-cCCEEEEEEccC
Confidence 47999999999999753 467899999976432 357899999999999 8999999999986 456889999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC-
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT- 492 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~~- 492 (627)
+|+|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 453 ~g~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~ 524 (635)
T 4fl3_A 453 LGPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 524 (635)
T ss_dssp TEEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---
T ss_pred CCCHHHHHhhC-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCcc
Confidence 99999999754 35899999999999999999999998 9999999999999999999999999998764322
Q ss_pred ------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchh
Q 006886 493 ------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVE 565 (627)
Q Consensus 493 ------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 565 (627)
...+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... ... ..+.......
T Consensus 525 ~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~------~~~-~~i~~~~~~~----- 592 (635)
T 4fl3_A 525 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS------EVT-AMLEKGERMG----- 592 (635)
T ss_dssp ----------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH------HHH-HHHHTTCCCC-----
T ss_pred ccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH------HHH-HHHHcCCCCC-----
Confidence 1235678999999998899999999999999999998 99999764321 111 1111111110
Q ss_pred hhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006886 566 LLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 566 l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~ 609 (627)
.......++.+++.+||+.||++||++.+|++.|+++..
T Consensus 593 -----~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 593 -----CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp -----CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred -----CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 011223457778889999999999999999999998754
No 125
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=2.5e-39 Score=334.75 Aligned_cols=254 Identities=24% Similarity=0.369 Sum_probs=202.6
Q ss_pred hcccCcCCceeEEEEEecC------CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEe
Q 006886 339 AEVLGKGSYGSTYKAILED------GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~------~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|.... ...||+|.+..... ..+.+.+|++++..+.+||||+++++++...+..++|||
T Consensus 51 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 130 (333)
T 2i1m_A 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130 (333)
T ss_dssp EEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEe
Confidence 4789999999999999652 24799999876432 346789999999999889999999999999999999999
Q ss_pred cCCCCCHHHHhhhcCC---------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEee
Q 006886 411 YMPAGSLFMLLHRNRS---------DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISD 481 (627)
Q Consensus 411 ~~~~g~L~~~l~~~~~---------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~D 481 (627)
|+++|+|.+++..... .....+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|
T Consensus 131 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~D 207 (333)
T 2i1m_A 131 YCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGD 207 (333)
T ss_dssp CCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCEEEGGGEEEBCC
T ss_pred cCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEEECCCCeEEECc
Confidence 9999999999975421 01235799999999999999999999998 99999999999999999999999
Q ss_pred cccccccCCCC------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhh
Q 006886 482 VGLAHLINFPT------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVR 554 (627)
Q Consensus 482 fG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 554 (627)
||+++...... ...+|+.|+|||++.+..++.++||||||+++|||++ |..||....... .......
T Consensus 208 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~------~~~~~~~ 281 (333)
T 2i1m_A 208 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS------KFYKLVK 281 (333)
T ss_dssp CGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH------HHHHHHH
T ss_pred cccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH------HHHHHHh
Confidence 99998654322 2235678999999988899999999999999999999 999997543221 1112222
Q ss_pred hcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006886 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 555 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~ 611 (627)
...... ... .....+.+++.+||+.+|.+|||+.|+++.|+++....
T Consensus 282 ~~~~~~-------~~~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 328 (333)
T 2i1m_A 282 DGYQMA-------QPA---FAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328 (333)
T ss_dssp HTCCCC-------CCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cCCCCC-------CCC---CCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence 211100 001 11235677888999999999999999999999986543
No 126
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=4.8e-39 Score=330.32 Aligned_cols=257 Identities=22% Similarity=0.369 Sum_probs=188.0
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|..+ +++.||+|+++... ...+.+.+|++++..+ +||||+++++++..++..++||||++ |
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~-~ 87 (317)
T 2pmi_A 10 LEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL-KHENIVRLYDVIHTENKLTLVFEFMD-N 87 (317)
T ss_dssp ---------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTC-CBTTBCCEEEEECCTTEEEEEEECCC-C
T ss_pred eeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhc-CCCCcceEEEEEEECCeEEEEEEecC-C
Confidence 478999999999999965 68999999986542 2346788999999999 99999999999999999999999998 5
Q ss_pred CHHHHhhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006886 416 SLFMLLHRNRS-DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 416 ~L~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
+|.+++..... .....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 88 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (317)
T 2pmi_A 88 DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNT 164 (317)
T ss_dssp BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCC
T ss_pred CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecCCCccc
Confidence 99999875432 12245899999999999999999999998 999999999999999999999999999876432
Q ss_pred -CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhc---ccccc-----
Q 006886 492 -TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREE---WTAEV----- 561 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----- 561 (627)
....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||......+ ....+....... .....
T Consensus 165 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~ 241 (317)
T 2pmi_A 165 FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE---QLKLIFDIMGTPNESLWPSVTKLPK 241 (317)
T ss_dssp CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCSCCTTTCGGGGGCTT
T ss_pred CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCCCChhHhhhhhhhhh
Confidence 23457899999999876 468999999999999999999999997543211 111111111000 00000
Q ss_pred cchhhhc--CCCh---------HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 562 FDVELLK--YQDV---------EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 562 ~d~~l~~--~~~~---------~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
+.+.... .... .....++.+++.+||+.||++|||+.|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 242 YNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp CCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 0000000 0000 0112357788889999999999999999763
No 127
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=4.7e-39 Score=334.39 Aligned_cols=254 Identities=17% Similarity=0.246 Sum_probs=189.3
Q ss_pred hcccCcCCceeEEEEEec----CCcEEEEEEeccccc------------CHHHHHHHHHHHHHhccCCCeeeeeeEEee-
Q 006886 339 AEVLGKGSYGSTYKAILE----DGTTVVVKRLREVAA------------TKREFEQQMEVVGTIGKHSNVVPVRAYYYS- 401 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~----~~~~vavK~l~~~~~------------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~- 401 (627)
.+.||+|+||.||+|... ++..||+|++..... ....+.+|+..+..+ +||||+++++++..
T Consensus 42 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-~h~ni~~~~~~~~~~ 120 (345)
T 2v62_A 42 GKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQL-DYLGIPLFYGSGLTE 120 (345)
T ss_dssp EEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTC-SCCCCCCEEEEEEEE
T ss_pred EeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccc-cccCcceeecccccc
Confidence 478999999999999975 578899999865321 122355667777777 99999999999988
Q ss_pred ---CCceEEEEecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC--C
Q 006886 402 ---KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL--N 476 (627)
Q Consensus 402 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~--~ 476 (627)
....++||||+ +++|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+|||++.++ .
T Consensus 121 ~~~~~~~~lv~e~~-~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 121 FKGRSYRFMVMERL-GIDLQKISGQNG-----TFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp SSSCEEEEEEEECE-EEEHHHHCBGGG-----BCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESSSTTS
T ss_pred cCCCcEEEEEEecc-CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccCCCCc
Confidence 67789999999 999999997642 6899999999999999999999998 99999999999999887 9
Q ss_pred eEEeecccccccCCC-----------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCH
Q 006886 477 GCISDVGLAHLINFP-----------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545 (627)
Q Consensus 477 ~ki~DfG~a~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~ 545 (627)
+||+|||+++..... ....+|+.|+|||++.+..++.++||||||+++|||++|+.||....... ..
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~--~~ 269 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP--VA 269 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH--HH
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc--HH
Confidence 999999999765321 23357899999999999899999999999999999999999996422111 01
Q ss_pred HHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006886 546 PRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 546 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~ 609 (627)
............ ...............++.+++.+||..+|++||++++|++.|+++.-
T Consensus 270 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 270 VQTAKTNLLDEL-----PQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHHHHTT-----THHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHHHHhhcccc-----cHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 111111111110 10000000000122356778889999999999999999999998764
No 128
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=5.6e-39 Score=332.83 Aligned_cols=245 Identities=22% Similarity=0.337 Sum_probs=193.8
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCCH
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 417 (627)
.+.||+|+||.||++..+ +++.||||++..... ...+|++++.++.+||||+++++++.+.+..++||||+++|+|
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L 103 (342)
T 2qr7_A 27 KEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGEL 103 (342)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcH
Confidence 478999999999999976 588999999975432 3456888888887899999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC-C---CeEEeecccccccCCC--
Q 006886 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD-L---NGCISDVGLAHLINFP-- 491 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~-~---~~ki~DfG~a~~~~~~-- 491 (627)
.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||+.++ + .+||+|||+++.....
T Consensus 104 ~~~i~~~-----~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~ 175 (342)
T 2qr7_A 104 LDKILRQ-----KFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG 175 (342)
T ss_dssp HHHHHTC-----TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC
T ss_pred HHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC
Confidence 9999754 35899999999999999999999998 9999999999998543 3 4999999999876432
Q ss_pred --CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006886 492 --TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
.+..+|+.|+|||++.+..++.++|||||||++|||++|+.||...... ........+...... +.. ...
T Consensus 176 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~~~~~i~~~~~~---~~~--~~~ 247 (342)
T 2qr7_A 176 LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD---TPEEILARIGSGKFS---LSG--GYW 247 (342)
T ss_dssp CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS---CHHHHHHHHHHCCCC---CCS--TTT
T ss_pred ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC---CHHHHHHHHccCCcc---cCc--ccc
Confidence 3446789999999998877899999999999999999999999753222 222222222221111 000 001
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 006886 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~ 605 (627)
...+ .++.+++.+||..||++||++.|++++-.
T Consensus 248 ~~~s---~~~~~li~~~L~~dP~~R~t~~~il~hp~ 280 (342)
T 2qr7_A 248 NSVS---DTAKDLVSKMLHVDPHQRLTAALVLRHPW 280 (342)
T ss_dssp TTSC---HHHHHHHHHHTCSSTTTSCCHHHHTTSHH
T ss_pred ccCC---HHHHHHHHHHCCCChhHCcCHHHHhcCCe
Confidence 1122 34567788999999999999999988544
No 129
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.5e-38 Score=322.23 Aligned_cols=248 Identities=28% Similarity=0.446 Sum_probs=188.6
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEecccccC---HHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCC
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAAT---KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|+.. ..||+|+++..... .+.+.+|++++..+ +||||+++++++ .....++||||++++
T Consensus 29 ~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~-~~~~~~lv~e~~~~~ 104 (289)
T 3og7_A 29 GQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVNILLFMGYS-TAPQLAIVTQWCEGS 104 (289)
T ss_dssp EEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEE-CSSSCEEEEECCCEE
T ss_pred eeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhC-CCCcEEEEEeec-cCCccEEEEEecCCC
Confidence 478999999999999865 35999998754332 45688999999999 899999999965 556788999999999
Q ss_pred CHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----
Q 006886 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491 (627)
Q Consensus 416 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~---- 491 (627)
+|.+++... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 105 ~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (289)
T 3og7_A 105 SLYHHLHAS----ETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH 177 (289)
T ss_dssp EHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC------------
T ss_pred cHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceeccccccccccc
Confidence 999999754 246899999999999999999999998 999999999999999999999999999765421
Q ss_pred --CCCCCCccccCccccC---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhh
Q 006886 492 --TTATRTIGYRAPEVTE---TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVEL 566 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 566 (627)
....+|+.|+|||++. +..++.++||||||+++|||++|+.||...... .. +............ .
T Consensus 178 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~-~~~~~~~~~~~~~----~ 247 (289)
T 3og7_A 178 QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-----DQ-IIEMVGRGSLSPD----L 247 (289)
T ss_dssp ------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH-----HH-HHHHHHHTSCCCC----T
T ss_pred cccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH-----HH-HHHHhcccccCcc----h
Confidence 2235789999999986 567888999999999999999999999754321 11 1111211111110 0
Q ss_pred hcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006886 567 LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 567 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~ 609 (627)
.. ........+.+++.+||+.+|++|||+.|+++.|+++..
T Consensus 248 ~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 248 SK--VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp TS--SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred hh--ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 00 011223467788889999999999999999999999864
No 130
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.3e-38 Score=327.78 Aligned_cols=242 Identities=19% Similarity=0.289 Sum_probs=189.7
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEecccccC---HHHHHHHHHHHHHhccC-CCeeeeeeEEeeCCceEEEEecCCC
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAAT---KREFEQQMEVVGTIGKH-SNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h-~niv~l~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||++...+++.||||++...... .+.+.+|++++..+.+| +||+++++++...+..++||| +.+
T Consensus 14 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~ 92 (343)
T 3dbq_A 14 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 92 (343)
T ss_dssp EEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CCS
T ss_pred EEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CCC
Confidence 4789999999999999888999999998754332 36788999999999433 999999999999999999999 568
Q ss_pred CCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006886 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++ ++.+||+|||+++.....
T Consensus 93 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 163 (343)
T 3dbq_A 93 IDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 163 (343)
T ss_dssp EEHHHHHHHS-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCCC------
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeecccccccCccccc
Confidence 8999999864 35899999999999999999999998 99999999999997 678999999999876432
Q ss_pred ---CCCCCCccccCccccCC-----------CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcc
Q 006886 492 ---TTATRTIGYRAPEVTET-----------RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEW 557 (627)
Q Consensus 492 ---~~~~~t~~y~aPE~~~~-----------~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 557 (627)
....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... ..............
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~~~~~~~~ 238 (343)
T 3dbq_A 164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----NQISKLHAIIDPNH 238 (343)
T ss_dssp ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-----SHHHHHHHHHCTTS
T ss_pred ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh-----hHHHHHHHHhcCCc
Confidence 23458999999999854 678999999999999999999999997432 11122222221111
Q ss_pred cccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 006886 558 TAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605 (627)
Q Consensus 558 ~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~ 605 (627)
.... .... ..++.+++.+||..||.+|||+.|++++-.
T Consensus 239 ~~~~-------~~~~---~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~ 276 (343)
T 3dbq_A 239 EIEF-------PDIP---EKDLQDVLKCCLKRDPKQRISIPELLAHPY 276 (343)
T ss_dssp CCCC-------CCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred ccCC-------cccC---CHHHHHHHHHHcCCChhHCCCHHHHHhCcc
Confidence 1000 0111 135667888999999999999999987643
No 131
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=9.2e-39 Score=322.49 Aligned_cols=242 Identities=21% Similarity=0.404 Sum_probs=197.0
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEee----------------
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS---------------- 401 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~---------------- 401 (627)
.+.||+|+||.||+|... +++.||+|++.... +.+.+|++++..+ +||||+++++++..
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (284)
T 2a19_B 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKL-DHVNIVHYNGCWDGFDYDPETSSKNSSRSK 91 (284)
T ss_dssp EEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHC-CCTTBCCEEEEEEEEEEC---------CCE
T ss_pred eeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhC-CCCCEEEEeeeEeccccCcccccccccccC
Confidence 478999999999999976 78999999986532 4577899999999 99999999998864
Q ss_pred CCceEEEEecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEee
Q 006886 402 KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISD 481 (627)
Q Consensus 402 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~D 481 (627)
....++||||+++|+|.+++.... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|
T Consensus 92 ~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~D 165 (284)
T 2a19_B 92 TKCLFIQMEFCDKGTLEQWIEKRR---GEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGD 165 (284)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHGG---GSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECC
T ss_pred cceEEEEEeccCCCCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCCCCEEECc
Confidence 345789999999999999997643 246899999999999999999999998 99999999999999999999999
Q ss_pred cccccccCCC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006886 482 VGLAHLINFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 482 fG~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
||++...... ....+++.|+|||++.+..++.++||||||+++|||++|..|+... ...... ......
T Consensus 166 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--------~~~~~~-~~~~~~ 236 (284)
T 2a19_B 166 FGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--------SKFFTD-LRDGII 236 (284)
T ss_dssp CTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--------HHHHHH-HHTTCC
T ss_pred chhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH--------HHHHHH-hhcccc
Confidence 9999876543 3345789999999999889999999999999999999999887421 111111 111111
Q ss_pred ccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006886 559 AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 559 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~~ 612 (627)
.. .. ...+.+++.+||..||++|||+.|++++|+.++...-
T Consensus 237 ~~----------~~---~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 237 SD----------IF---DKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp CT----------TS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred cc----------cC---CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 11 11 1245678889999999999999999999999976543
No 132
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.4e-38 Score=332.50 Aligned_cols=189 Identities=27% Similarity=0.432 Sum_probs=155.3
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCC--ceEEEEecC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD--EKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~--~~~lv~e~~ 412 (627)
.+.||+|+||.||+|... +++.||||++..... ..+.+.+|+.++..+..||||+++++++...+ ..++||||+
T Consensus 14 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~ 93 (388)
T 3oz6_A 14 VKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM 93 (388)
T ss_dssp EEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECC
T ss_pred EEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEeccc
Confidence 478999999999999965 689999999865422 34567789999999966999999999997544 689999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC--
Q 006886 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF-- 490 (627)
Q Consensus 413 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~-- 490 (627)
+ |+|..++... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 94 ~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 163 (388)
T 3oz6_A 94 E-TDLHAVIRAN------ILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163 (388)
T ss_dssp S-EEHHHHHHHT------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred C-cCHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence 7 5899998753 4899999999999999999999998 99999999999999999999999999976532
Q ss_pred -----------------------CCCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 006886 491 -----------------------PTTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHS 537 (627)
Q Consensus 491 -----------------------~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~ 537 (627)
.....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 234 (388)
T 3oz6_A 164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS 234 (388)
T ss_dssp CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence 122357899999999876 67899999999999999999999999764
No 133
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6e-38 Score=320.92 Aligned_cols=252 Identities=20% Similarity=0.290 Sum_probs=193.3
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||++... +++.||+|++..... ..+.+.+|++++.++ +||||+++++++..++..++|+||++
T Consensus 39 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 117 (309)
T 2h34_A 39 RRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRL-QEPHVVPIHDFGEIDGQLYVDMRLIN 117 (309)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred EEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhc-CCCCeeEEEEEEeeCCeEEEEEEecC
Confidence 478999999999999975 688999999875432 236788999999999 99999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+++|.+++... ..+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 118 ~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 189 (309)
T 2h34_A 118 GVDLAAMLRRQ-----GPLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASATTDEKL 189 (309)
T ss_dssp CEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC---------
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCcccccccc
Confidence 99999999864 35899999999999999999999998 999999999999999999999999998766432
Q ss_pred ---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006886 492 ---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 492 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
....+++.|+|||++.+..++.++||||||+++|||++|+.||.... ............. .+. ..
T Consensus 190 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~~~~~~~~~~~----~~~-~~ 257 (309)
T 2h34_A 190 TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ-------LSVMGAHINQAIP----RPS-TV 257 (309)
T ss_dssp -------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCH-------HHHHHHHHHSCCC----CGG-GT
T ss_pred ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCch-------HHHHHHHhccCCC----Ccc-cc
Confidence 23457889999999999899999999999999999999999997532 1111111111110 000 00
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHhhccccccc
Q 006886 569 YQDVEEEMVQMLQIALSCVAKVPDSRP-KMDDVVRMIEQIQQPELRN 614 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~p~~RP-s~~ev~~~L~~~~~~~~~~ 614 (627)
.... ...+.+++.+||+.+|++|| +++++++.|+++.......
T Consensus 258 ~~~~---~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~~ 301 (309)
T 2h34_A 258 RPGI---PVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQD 301 (309)
T ss_dssp STTC---CTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-----
T ss_pred CCCC---CHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhccc
Confidence 1111 22466788899999999999 9999999999986655433
No 134
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.9e-38 Score=338.33 Aligned_cols=244 Identities=19% Similarity=0.279 Sum_probs=194.0
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.++||+|+||+||+|+.+ +++.||+|++.... ...+.+..|..++..+ +||||+++++++.+.+..++||||++
T Consensus 79 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~~~~lV~Ey~~ 157 (437)
T 4aw2_A 79 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG-DSKWITTLHYAFQDDNNLYLVMDYYV 157 (437)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHS-CTTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeeCCEEEEEEecCC
Confidence 478999999999999976 47889999996532 1233488899999998 99999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|.+++... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 158 gg~L~~~l~~~----~~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~ 230 (437)
T 4aw2_A 158 GGDLLTLLSKF----EDRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 230 (437)
T ss_dssp TCBHHHHHHTT----TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred CCcHHHHHHHc----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcchhhhhhcccCCC
Confidence 99999999763 235899999999999999999999998 999999999999999999999999999766432
Q ss_pred ---CCCCCCccccCccccC-----CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006886 492 ---TTATRTIGYRAPEVTE-----TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 492 ---~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
....||+.|+|||++. ...++.++|||||||++|||++|+.||.... .......+........ +.
T Consensus 231 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~------~~~~~~~i~~~~~~~~-~p 303 (437)
T 4aw2_A 231 VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES------LVETYGKIMNHKERFQ-FP 303 (437)
T ss_dssp EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHTHHHHCC-CC
T ss_pred cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCC------hhHHHHhhhhcccccc-CC
Confidence 2356899999999986 5678999999999999999999999997542 1222222221110000 00
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 006886 564 VELLKYQDVEEEMVQMLQIALSCVAKVPDS--RPKMDDVVRM 603 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~--RPs~~ev~~~ 603 (627)
. .....++ ++.+++.+|+..+|++ ||+++|++++
T Consensus 304 ~---~~~~~s~---~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 304 T---QVTDVSE---NAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp S---SCCCSCH---HHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred c---ccccCCH---HHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 0 0011223 4556777999888887 9999999874
No 135
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=320.64 Aligned_cols=239 Identities=23% Similarity=0.404 Sum_probs=177.1
Q ss_pred hcccCcCCceeEEEEEe-cCCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+. .+++.||+|++.... ...+.+.+|++++..+ +||||+++++++.+.+..++|+||++
T Consensus 16 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 94 (278)
T 3cok_A 16 GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-KHPSILELYNYFEDSNYVYLVLEMCH 94 (278)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTB-CCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred eeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhC-CCCCeEeEEEEEccCCeEEEEEecCC
Confidence 47899999999999996 478999999986532 2346789999999999 99999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+++|.+++... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 95 ~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 167 (278)
T 3cok_A 95 NGEMNRYLKNR----VKPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE 167 (278)
T ss_dssp TEEHHHHHHTC----SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred CCcHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC
Confidence 99999999754 246899999999999999999999998 999999999999999999999999999876432
Q ss_pred --CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006886 492 --TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
....+++.|+|||++.+..++.++||||||+++|||++|+.||......... ..... . +.. ..
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~------~~~~~----~---~~~--~~ 232 (278)
T 3cok_A 168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL------NKVVL----A---DYE--MP 232 (278)
T ss_dssp ------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------CCS----S---CCC--CC
T ss_pred cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH------HHHhh----c---ccC--Cc
Confidence 2345789999999999888999999999999999999999999764332211 00000 0 000 01
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
.. ...++.+++.+||+.||++|||+.+++++
T Consensus 233 ~~---~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 233 SF---LSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp TT---SCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cc---cCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 11 12356678889999999999999999763
No 136
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.2e-38 Score=327.44 Aligned_cols=254 Identities=22% Similarity=0.363 Sum_probs=200.1
Q ss_pred hcccCcCCceeEEEEEec-----CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeC--CceEEEE
Q 006886 339 AEVLGKGSYGSTYKAILE-----DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSK--DEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-----~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--~~~~lv~ 409 (627)
.+.||+|+||.||++.++ +++.||||++.... ...+.+.+|+++++++ +||||+++++++.+. ...++||
T Consensus 36 ~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~ 114 (318)
T 3lxp_A 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL-YHEHIIKYKGCCEDAGAASLQLVM 114 (318)
T ss_dssp EEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTTTEEEEEE
T ss_pred hheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhC-CCcchhhEEEEEecCCCceEEEEE
Confidence 478999999999998753 57899999997643 2346789999999999 899999999999874 5678999
Q ss_pred ecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006886 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||+++|+|.+++... .+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 115 e~~~~~~L~~~l~~~------~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 115 EYVPLGSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp CCCTTCBHHHHGGGS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred ecccCCcHHHHHhhC------CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 999999999999753 3899999999999999999999998 9999999999999999999999999998765
Q ss_pred CCC-------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCC-----CCCC-HHH--HHHHHhh
Q 006886 490 FPT-------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHD-----DVVD-LPR--WVRSVVR 554 (627)
Q Consensus 490 ~~~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~-----~~~~-~~~--~~~~~~~ 554 (627)
... ...++..|+|||++.+..++.++||||||+++|||++|+.||...... .... ... .......
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh
Confidence 432 234677899999998888999999999999999999999998642110 0000 000 0000000
Q ss_pred hcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006886 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 555 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~~ 612 (627)
... ...........+.+++.+||+.||++|||+.|+++.|+.+.+.-.
T Consensus 266 ~~~----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 313 (318)
T 3lxp_A 266 RGE----------RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313 (318)
T ss_dssp TTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ccc----------CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence 000 001112223467788889999999999999999999999876543
No 137
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=4.6e-39 Score=331.95 Aligned_cols=256 Identities=23% Similarity=0.378 Sum_probs=198.7
Q ss_pred hcccCcCCceeEEEEEe-----cCCcEEEEEEeccccc-CHHHHHHHHHHHHHhccCCCeeeeeeEEe--eCCceEEEEe
Q 006886 339 AEVLGKGSYGSTYKAIL-----EDGTTVVVKRLREVAA-TKREFEQQMEVVGTIGKHSNVVPVRAYYY--SKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-----~~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~--~~~~~~lv~e 410 (627)
.+.||+|+||.||++++ .+++.||||++..... ..+.+.+|++++.++ +||||+++++++. .....++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e 106 (327)
T 3lxl_A 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIVKYRGVSYGPGRQSLRLVME 106 (327)
T ss_dssp EEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSSCEEEEEEE
T ss_pred hhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCCceEEEEEe
Confidence 47899999999999984 3588999999875432 346689999999999 9999999999987 4456889999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC
Q 006886 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF 490 (627)
Q Consensus 411 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~ 490 (627)
|+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 107 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 179 (327)
T 3lxl_A 107 YLPSGCLRDFLQRHR----ARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPL 179 (327)
T ss_dssp CCTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred ecCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence 999999999998643 35899999999999999999999998 99999999999999999999999999987643
Q ss_pred CC-------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCC--------CCCCHHHHHHHHhhh
Q 006886 491 PT-------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHD--------DVVDLPRWVRSVVRE 555 (627)
Q Consensus 491 ~~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~--------~~~~~~~~~~~~~~~ 555 (627)
.. ...+|..|+|||++.+..++.++||||||+++|||++|+.||...... ...............
T Consensus 180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (327)
T 3lxl_A 180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEE 259 (327)
T ss_dssp TCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHT
T ss_pred CCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhc
Confidence 22 234677899999998888999999999999999999999998642110 000000111111111
Q ss_pred cccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006886 556 EWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 556 ~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~~ 612 (627)
... ..........+.+++.+||+.||++|||+.|++++|+.+.....
T Consensus 260 ~~~----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 306 (327)
T 3lxl_A 260 GQR----------LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306 (327)
T ss_dssp TCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred ccC----------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 100 01112223456788889999999999999999999999866544
No 138
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.8e-38 Score=320.27 Aligned_cols=253 Identities=20% Similarity=0.357 Sum_probs=201.1
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc-------CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEe
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA-------TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+++.+ +++.||+|.+..... ..+.+.+|++++.++ +||||+++++++...+..++|||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e 88 (283)
T 3bhy_A 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI-RHPNIITLHDIFENKTDVVLILE 88 (283)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEE
T ss_pred HHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhC-CCCCeeehhheecCCCeEEEEEe
Confidence 478999999999999976 689999999865421 367899999999999 89999999999999999999999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC----CeEEeeccccc
Q 006886 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL----NGCISDVGLAH 486 (627)
Q Consensus 411 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~----~~ki~DfG~a~ 486 (627)
|+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++ .+||+|||++.
T Consensus 89 ~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 89 LVSGGELFDFLAEK-----ESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp CCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred ecCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 99999999999764 35899999999999999999999998 99999999999999877 89999999998
Q ss_pred ccCCC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006886 487 LINFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 487 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
..... ....+++.|+|||++.+..++.++||||||+++|||++|+.||..... ......+.... ...+
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~---~~~~ 231 (283)
T 3bhy_A 161 KIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK------QETLTNISAVN---YDFD 231 (283)
T ss_dssp ECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHTTC---CCCC
T ss_pred eccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch------HHHHHHhHhcc---cCCc
Confidence 76443 234578999999999999999999999999999999999999975321 11111111110 0011
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHHhhccccccc
Q 006886 564 VELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR--MIEQIQQPELRN 614 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~--~L~~~~~~~~~~ 614 (627)
.... . .....+.+++.+||..+|++|||+.|+++ .++.+.....+.
T Consensus 232 ~~~~--~---~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~~~~ 279 (283)
T 3bhy_A 232 EEYF--S---NTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRNVRG 279 (283)
T ss_dssp HHHH--T---TCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHCCC--
T ss_pred chhc--c---cCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHHhhhc
Confidence 1110 0 11235677888999999999999999998 566665554433
No 139
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.3e-39 Score=339.23 Aligned_cols=243 Identities=17% Similarity=0.247 Sum_probs=193.0
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+++.+ +|+.||+|++.... ...+.+.+|.+++..+ +||||+++++++.+.+..++||||++
T Consensus 66 ~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~~~~lVmE~~~ 144 (412)
T 2vd5_A 66 LKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNG-DRRWITQLHFAFQDENYLYLVMEYYV 144 (412)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHS-CTTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEeeCCEEEEEEcCCC
Confidence 478999999999999975 68999999996532 1223478899999988 99999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|.+++.+.. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 145 gg~L~~~l~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~ 217 (412)
T 2vd5_A 145 GGDLLTLLSKFG----ERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGT 217 (412)
T ss_dssp SCBHHHHHHHHS----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred CCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEeechhheeccCCCc
Confidence 999999998642 35899999999999999999999998 999999999999999999999999999876443
Q ss_pred ---CCCCCCccccCccccC-------CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccc
Q 006886 492 ---TTATRTIGYRAPEVTE-------TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEV 561 (627)
Q Consensus 492 ---~~~~~t~~y~aPE~~~-------~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (627)
....||+.|+|||++. ...++.++|||||||++|||++|+.||..... ......+.........
T Consensus 218 ~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~------~~~~~~i~~~~~~~~~ 291 (412)
T 2vd5_A 218 VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST------AETYGKIVHYKEHLSL 291 (412)
T ss_dssp EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHTHHHHCCC
T ss_pred cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH------HHHHHHHHhcccCcCC
Confidence 2346899999999986 45789999999999999999999999975421 1222222211100000
Q ss_pred cchhhhcCCChHHHHHHHHHHHHHcccCCCCCC---CCHHHHHHH
Q 006886 562 FDVELLKYQDVEEEMVQMLQIALSCVAKVPDSR---PKMDDVVRM 603 (627)
Q Consensus 562 ~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~R---Ps~~ev~~~ 603 (627)
+.. ....+ .++.+++.+|+. +|++| |+++|++++
T Consensus 292 --p~~--~~~~s---~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 292 --PLV--DEGVP---EEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp --C------CCC---HHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred --Ccc--ccCCC---HHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 000 01122 345677789998 99998 699999764
No 140
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=3.5e-38 Score=320.79 Aligned_cols=248 Identities=25% Similarity=0.409 Sum_probs=195.1
Q ss_pred hcccCcCCceeEEEEEecC----CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCCeeeeeeEEee-CCceEEEEec
Q 006886 339 AEVLGKGSYGSTYKAILED----GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYS-KDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~----~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~-~~~~~lv~e~ 411 (627)
.+.||+|+||.||+|...+ ...||+|.+..... ..+.+.+|+++++++ +||||+++++++.. ++..++||||
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~v~e~ 108 (298)
T 3f66_A 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPY 108 (298)
T ss_dssp EEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSSSCCEEEEEC
T ss_pred cceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhC-CCCCEeeeeeEEEcCCCceEEEEeC
Confidence 4789999999999998643 23589999875432 346788999999999 89999999998654 5577899999
Q ss_pred CCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC
Q 006886 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 412 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~ 491 (627)
+++|+|.+++... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 109 ~~~~~L~~~l~~~----~~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 109 MKHGDLRNFIRNE----THNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp CTTCBHHHHHHCT----TCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred CCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECccccccccccc
Confidence 9999999999753 245899999999999999999999998 999999999999999999999999999865332
Q ss_pred --------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006886 492 --------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 492 --------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
....+|+.|+|||.+.+..++.++||||||+++|||++ |.+||......+ .... ....... .
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~---~~~~---~~~~~~~---~ 252 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVY---LLQGRRL---L 252 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT---HHHH---HHTTCCC---C
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH---HHHH---HhcCCCC---C
Confidence 22345678999999998899999999999999999999 555665433221 1111 1111100 0
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006886 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~ 611 (627)
. ... ....+.+++.+||+.+|++|||+.|+++.|+++...-
T Consensus 253 ~-----~~~---~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 293 (298)
T 3f66_A 253 Q-----PEY---CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 293 (298)
T ss_dssp C-----CTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred C-----Ccc---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 0 011 1235677888999999999999999999999987643
No 141
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=4.4e-38 Score=338.99 Aligned_cols=238 Identities=22% Similarity=0.388 Sum_probs=197.4
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|+++++.+ +||||+++++++...+..++||||++
T Consensus 21 ~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~~lv~E~~~ 99 (476)
T 2y94_A 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLF-RHPHIIKLYQVISTPSDIFMVMEYVS 99 (476)
T ss_dssp EEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCS
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEEEEeCCC
Confidence 478999999999999976 78999999996542 2456789999999999 99999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 100 gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~ 171 (476)
T 2y94_A 100 GGELFDYICKN-----GRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 171 (476)
T ss_dssp SEEHHHHTTSS-----SSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECCTTCC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhcccccc
Confidence 99999999753 35899999999999999999999998 999999999999999999999999999876543
Q ss_pred -CCCCCCccccCccccCCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006886 492 -TTATRTIGYRAPEVTETRKA-SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
.+..||+.|+|||++.+..+ +.++|||||||++|||++|+.||..... ......+...... ..
T Consensus 172 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~------~~~~~~i~~~~~~---------~p 236 (476)
T 2y94_A 172 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV------PTLFKKICDGIFY---------TP 236 (476)
T ss_dssp BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS------HHHHHHHHTTCCC---------CC
T ss_pred ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH------HHHHHHHhcCCcC---------CC
Confidence 34568999999999988765 6899999999999999999999975321 2222222221110 00
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
...+ .++.+++.+||..||++|||+.|++++
T Consensus 237 ~~~s---~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 237 QYLN---PSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp TTCC---HHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ccCC---HHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 1111 346678889999999999999999984
No 142
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=329.12 Aligned_cols=249 Identities=21% Similarity=0.330 Sum_probs=183.1
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCCeeeeeeEEe--------eCCceEEE
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYY--------SKDEKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~--------~~~~~~lv 408 (627)
.+.||+|+||.||+++.. +++.||||++.... ...+.+.+|+.++.++.+||||+++++++. .....++|
T Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv 112 (337)
T 3ll6_A 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLL 112 (337)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEE
T ss_pred EEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEE
Confidence 478999999999999965 68999999985543 235678899999999966999999999984 23347899
Q ss_pred EecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006886 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 409 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~ 488 (627)
+||+. |+|.+++..... ...+++..++.++.|++.||.|||+.+ ++|+||||||+|||++.++.+||+|||+++..
T Consensus 113 ~e~~~-g~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 188 (337)
T 3ll6_A 113 TELCK-GQLVEFLKKMES--RGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFGSATTI 188 (337)
T ss_dssp EECCS-EEHHHHHHHHHT--TCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCCTTCBCC
T ss_pred EEecC-CCHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecCccceec
Confidence 99995 799999876332 246999999999999999999999975 56999999999999999999999999999876
Q ss_pred CCCC----------------CCCCCccccCcccc---CCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHH
Q 006886 489 NFPT----------------TATRTIGYRAPEVT---ETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWV 549 (627)
Q Consensus 489 ~~~~----------------~~~~t~~y~aPE~~---~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~ 549 (627)
.... ...+|+.|+|||++ .+..++.++||||||+++|||++|+.||........
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~------- 261 (337)
T 3ll6_A 189 SHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI------- 261 (337)
T ss_dssp SSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------------
T ss_pred cccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh-------
Confidence 4321 23478899999998 566789999999999999999999999975322110
Q ss_pred HHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006886 550 RSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 550 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~ 611 (627)
....... .. ... ....+.+++.+||+.+|++|||+.|++++|+.+....
T Consensus 262 ---~~~~~~~---~~----~~~---~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 262 ---VNGKYSI---PP----HDT---QYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp -------CCC---CT----TCC---SSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred ---hcCcccC---Cc----ccc---cchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 0000000 00 000 1123567888999999999999999999999987543
No 143
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=7.3e-38 Score=315.35 Aligned_cols=240 Identities=23% Similarity=0.390 Sum_probs=194.7
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|..+ ++..||+|++.... .....+.+|++++.++ +||||+++++++.+.+..++||||++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 92 (279)
T 3fdn_A 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAP 92 (279)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred eeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcC-CCCCCcchhheEecCCEEEEEEecCC
Confidence 478999999999999866 57799999986532 3456788999999999 89999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 93 ~~~l~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~ 164 (279)
T 3fdn_A 93 LGTVYRELQKL-----SKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 164 (279)
T ss_dssp TEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccCCcccc
Confidence 99999999765 24899999999999999999999998 999999999999999999999999998665432
Q ss_pred CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006886 492 TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
....+++.|+|||++.+..++.++||||||+++|||++|+.||.... .......+...... + .
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~~---~------~-- 227 (279)
T 3fdn_A 165 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISRVEFT---F------P-- 227 (279)
T ss_dssp ---CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHTCCC---C------C--
T ss_pred cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc------HHHHHHHHHhCCCC---C------C--
Confidence 34467899999999999999999999999999999999999997532 11111111111100 0 0
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 006886 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~ 605 (627)
......+.+++.+||+.+|++|||+.|++++-.
T Consensus 228 -~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~ 260 (279)
T 3fdn_A 228 -DFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 260 (279)
T ss_dssp -TTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHH
T ss_pred -CcCCHHHHHHHHHHhccChhhCCCHHHHhhCcc
Confidence 111234567888999999999999999998643
No 144
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.7e-38 Score=318.90 Aligned_cols=246 Identities=21% Similarity=0.364 Sum_probs=196.4
Q ss_pred hcccCcCCceeEEEEEecC----CcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecC
Q 006886 339 AEVLGKGSYGSTYKAILED----GTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~----~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~ 412 (627)
.+.||+|+||.||+|...+ +..||+|.+.... ...+.+.+|++++..+ +||||+++++++.+ +..++||||+
T Consensus 17 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~-~~~~~v~e~~ 94 (281)
T 3cc6_A 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL-DHPHIVKLIGIIEE-EPTWIIMELY 94 (281)
T ss_dssp EEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHH-CCTTBCCEEEEECS-SSCEEEEECC
T ss_pred EEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhC-CCCCcceEEEEEcC-CCCEEEEecC
Confidence 4789999999999998643 2369999987542 2456789999999999 99999999999764 4568999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC-
Q 006886 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP- 491 (627)
Q Consensus 413 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~- 491 (627)
++|+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 95 ~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 167 (281)
T 3cc6_A 95 PYGELGHYLERNK----NSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDED 167 (281)
T ss_dssp TTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGCC----
T ss_pred CCCCHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCccccccc
Confidence 9999999997653 35899999999999999999999998 999999999999999999999999999876432
Q ss_pred ----CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhh
Q 006886 492 ----TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVEL 566 (627)
Q Consensus 492 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 566 (627)
....+++.|+|||++.+..++.++||||||+++|||++ |+.||......+ ....+ ...... .
T Consensus 168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~---~~~~~---~~~~~~-~------ 234 (281)
T 3cc6_A 168 YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD---VIGVL---EKGDRL-P------ 234 (281)
T ss_dssp -----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG---HHHHH---HHTCCC-C------
T ss_pred ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH---HHHHH---hcCCCC-C------
Confidence 22345778999999988899999999999999999998 999997543221 11111 111100 0
Q ss_pred hcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006886 567 LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 567 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~ 610 (627)
... .....+.+++.+||..+|++|||+.|+++.|+++.+.
T Consensus 235 -~~~---~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 235 -KPD---LCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp -CCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -CCC---CCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 001 1123567788899999999999999999999998654
No 145
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=4.5e-38 Score=323.67 Aligned_cols=242 Identities=19% Similarity=0.352 Sum_probs=198.1
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc-------CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEe
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA-------TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+++.+ +|+.||+|++..... ..+.+.+|++++..+ +||||+++++++.+.+..++|||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e 95 (321)
T 2a2a_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-LHHNVITLHDVYENRTDVVLILE 95 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEC
T ss_pred eeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCEEEEEEE
Confidence 578999999999999976 689999999865422 367899999999999 89999999999999999999999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC----CeEEeeccccc
Q 006886 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL----NGCISDVGLAH 486 (627)
Q Consensus 411 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~----~~ki~DfG~a~ 486 (627)
|+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++ .+||+|||+++
T Consensus 96 ~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~ 167 (321)
T 2a2a_A 96 LVSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (321)
T ss_dssp CCCSCBHHHHHHTC-----SCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred cCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence 99999999999753 35899999999999999999999998 99999999999999988 79999999998
Q ss_pred ccCCC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006886 487 LINFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 487 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
..... ....+|+.|+|||++.+..++.++||||||+++|||++|+.||..... ......+..... .++
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~i~~~~~---~~~ 238 (321)
T 2a2a_A 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK------QETLANITSVSY---DFD 238 (321)
T ss_dssp ECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHHTTCC---CCC
T ss_pred ecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhccc---ccC
Confidence 76543 234588999999999999999999999999999999999999975321 112222111110 011
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 564 VELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
.... . .....+.+++.+|+..||++|||+.|++++
T Consensus 239 ~~~~--~---~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 239 EEFF--S---HTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp HHHH--T---TCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred hhhh--c---ccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1110 0 112356678889999999999999999874
No 146
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=6.5e-38 Score=316.82 Aligned_cols=243 Identities=24% Similarity=0.351 Sum_probs=191.3
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||++..+ ++..||+|++.... ...+.+.+|++++..+ +||||+++++++.+.+..++||||+++|
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 105 (285)
T 3is5_A 27 KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSL-DHPNIIKIFEVFEDYHNMYIVMETCEGG 105 (285)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCSCC
T ss_pred cceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhC-CCchHHhHHHheecCCeEEEEEEeCCCC
Confidence 578999999999999965 68899999987653 3467899999999999 9999999999999999999999999999
Q ss_pred CHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe---cCCCCeEEeecccccccCCC-
Q 006886 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL---TQDLNGCISDVGLAHLINFP- 491 (627)
Q Consensus 416 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl---~~~~~~ki~DfG~a~~~~~~- 491 (627)
+|.+++..... ....+++..++.++.|++.||.|||+.+ |+||||||+||++ +.++.+||+|||+++.....
T Consensus 106 ~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (285)
T 3is5_A 106 ELLERIVSAQA-RGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE 181 (285)
T ss_dssp BHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred cHHHHHHhhhh-cccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc
Confidence 99999865321 1246899999999999999999999998 9999999999999 45688999999999876432
Q ss_pred --CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006886 492 --TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
....+|+.|+|||++. ..++.++||||||+++|||++|+.||..... .............. ... .
T Consensus 182 ~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~------~~~~~~~~~~~~~~---~~~---~ 248 (285)
T 3is5_A 182 HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL------EEVQQKATYKEPNY---AVE---C 248 (285)
T ss_dssp -----CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCCC---CC-----
T ss_pred cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCH------HHHHhhhccCCccc---ccc---c
Confidence 3345789999999986 4689999999999999999999999975421 11111111111000 000 0
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006886 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~ 602 (627)
.. ...++.+++.+|++.||++|||+.|+++
T Consensus 249 ~~---~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 249 RP---LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp CC---CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred Cc---CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 01 1235667888999999999999999976
No 147
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=3.7e-39 Score=338.65 Aligned_cols=245 Identities=10% Similarity=0.025 Sum_probs=178.1
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc----CHHHHHHHHHHHHHhc-cCCCeeeee-------eEEeeC---
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVVGTIG-KHSNVVPVR-------AYYYSK--- 402 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~-~h~niv~l~-------~~~~~~--- 402 (627)
.+.||+|+||.||+|... +++.||||++..... ..+.+.+|++++..+. +||||++++ +++...
T Consensus 67 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~ 146 (371)
T 3q60_A 67 VEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQP 146 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSC
T ss_pred eeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCC
Confidence 478999999999999965 789999999986432 3456778877777774 599988754 444332
Q ss_pred --------------CceEEEEecCCCCCHHHHhhhcCCCCCCCCCHHHH------HHHHHHHHHHHHHHHhcCCCCeeec
Q 006886 403 --------------DEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSR------MKIALGTARGIAFIHSEGGAKFTHG 462 (627)
Q Consensus 403 --------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~------~~i~~~ia~~l~~LH~~~~~~ivH~ 462 (627)
...++||||++ |+|.+++.... ..+.+..+ ..++.|++.||+|||+++ |+||
T Consensus 147 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~----~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~---ivHr 218 (371)
T 3q60_A 147 PFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD----FVYVFRGDEGILALHILTAQLIRLAANLQSKG---LVHG 218 (371)
T ss_dssp SSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH----HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT---EEET
T ss_pred CeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc----cccchhhhhhhhhHHHHHHHHHHHHHHHHHCC---CccC
Confidence 23799999998 89999998642 23455555 788899999999999998 9999
Q ss_pred CCCCCCeEecCCCCeEEeecccccccCCCC-CCCCCccccCccccCC--CCCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Q 006886 463 NIKSSNVLLTQDLNGCISDVGLAHLINFPT-TATRTIGYRAPEVTET--RKASQKSDVYSFGVLLLEMLTGKAPLQHSGH 539 (627)
Q Consensus 463 Dlk~~NILl~~~~~~ki~DfG~a~~~~~~~-~~~~t~~y~aPE~~~~--~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~ 539 (627)
||||+|||++.++.+||+|||+++...... ...+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 219 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~ 298 (371)
T 3q60_A 219 HFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTP 298 (371)
T ss_dssp TCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCT
T ss_pred cCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCc
Confidence 999999999999999999999998776544 4557799999999987 6799999999999999999999999986533
Q ss_pred CCCCCHHHHHHHHhhhcccccc--cchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006886 540 DDVVDLPRWVRSVVREEWTAEV--FDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~--~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~ 602 (627)
...... ........ .......... ....+.+++.+||+.||++|||+.|+++
T Consensus 299 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~---~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 299 GIKGSW--------KRPSLRVPGTDSLAFGSCTP---LPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TCTTCC--------CBCCTTSCCCCSCCCTTSSC---CCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred ccccch--------hhhhhhhccccccchhhccC---CCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 211100 00000000 0000111112 2335667888999999999999999986
No 148
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=4.1e-38 Score=322.67 Aligned_cols=250 Identities=23% Similarity=0.411 Sum_probs=191.0
Q ss_pred hcccCcCCceeEEEEEec----CCcEEEEEEecccccC---HHHHHHHHHHHHHhccCCCeeeeeeEEeeCCc-----eE
Q 006886 339 AEVLGKGSYGSTYKAILE----DGTTVVVKRLREVAAT---KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDE-----KL 406 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~----~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~-----~~ 406 (627)
.+.||+|+||.||+|... .+..||+|++...... .+.+.+|++++.++ +||||+++++++...+. .+
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~ 117 (313)
T 3brb_A 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF-SHPNVIRLLGVCIEMSSQGIPKPM 117 (313)
T ss_dssp EEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEC-------CEE
T ss_pred ccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcC-CCCCeeeeeEEEeeccccCCcccE
Confidence 578999999999999864 2458999998754332 35688999999999 89999999999987553 48
Q ss_pred EEEecCCCCCHHHHhhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccc
Q 006886 407 VVYSYMPAGSLFMLLHRNRS-DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA 485 (627)
Q Consensus 407 lv~e~~~~g~L~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a 485 (627)
+|+||+++|+|.+++..... .....+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 118 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kl~Dfg~~ 194 (313)
T 3brb_A 118 VILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMTVCVADFGLS 194 (313)
T ss_dssp EEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTTSCEEECSCSCC
T ss_pred EEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEEeecCcc
Confidence 99999999999999964322 23456999999999999999999999998 999999999999999999999999999
Q ss_pred cccCCC------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006886 486 HLINFP------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 486 ~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
+..... ....+++.|+|||.+.+..++.++||||||+++|||++ |..||....... . ..........
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~---~~~~~~~~~~ 268 (313)
T 3brb_A 195 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE---M---YDYLLHGHRL 268 (313)
T ss_dssp ----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---H---HHHHHTTCCC
T ss_pred eecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH---H---HHHHHcCCCC
Confidence 876432 22335778999999999999999999999999999999 889987543221 1 1111111100
Q ss_pred ccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006886 559 AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 559 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~ 609 (627)
.........+.+++.+||..+|++|||+.+++++|+++..
T Consensus 269 -----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~ 308 (313)
T 3brb_A 269 -----------KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308 (313)
T ss_dssp -----------CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----------CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 0011122457788889999999999999999999999864
No 149
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=4.1e-38 Score=339.84 Aligned_cols=252 Identities=19% Similarity=0.247 Sum_probs=200.2
Q ss_pred hcccCcCCceeEEEEEe-cCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCCH
Q 006886 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 417 (627)
.+.||+|+||.||+|+. .+++.||||++.... ...++..|++++..+.+|+++..+..++...+..++||||+ +++|
T Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL 89 (483)
T 3sv0_A 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSL 89 (483)
T ss_dssp CCCCEECSSCEEEEEEETTTCCEEEEEEEETTC-SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEEeeCCCEEEEEEEECCCCcEEEEEEecccc-ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCH
Confidence 47899999999999996 468999999876433 23458899999999966677777777778888899999999 9999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe---cCCCCeEEeecccccccCCCC--
Q 006886 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL---TQDLNGCISDVGLAHLINFPT-- 492 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl---~~~~~~ki~DfG~a~~~~~~~-- 492 (627)
.+++.... ..+++..++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++......
T Consensus 90 ~~ll~~~~----~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (483)
T 3sv0_A 90 EDLFNFCS----RKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTH 162 (483)
T ss_dssp HHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred HHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccc
Confidence 99997542 35999999999999999999999998 9999999999999 688999999999998764322
Q ss_pred ---------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006886 493 ---------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 493 ---------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
...||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+..+...... ....
T Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~---~~~~~i~~~~~~-~~~~ 238 (483)
T 3sv0_A 163 QHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK---QKYEKISEKKVA-TSIE 238 (483)
T ss_dssp CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHH---HHHHHHHHHHHH-SCHH
T ss_pred cccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHH---HHHHHHhhcccc-ccHH
Confidence 345789999999999999999999999999999999999999875443221 111111111100 0000
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006886 564 VELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~ 609 (627)
.+. .. ...++.+++..||+.+|++||++.+|++.|+++..
T Consensus 239 -~l~--~~---~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 239 -ALC--RG---YPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp -HHH--TT---SCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred -HHh--cC---CcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 000 01 12367788889999999999999999999999854
No 150
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=8.3e-39 Score=329.99 Aligned_cols=244 Identities=18% Similarity=0.309 Sum_probs=196.1
Q ss_pred cccCcCCceeEEEEEec-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCC
Q 006886 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 415 (627)
+.||+|+||.||+|..+ +++.||+|++.... .....+.+|+.++..+..||||+++++++...+..++||||+++|
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~ 114 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG 114 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCC
Confidence 78999999999999976 68999999987542 346789999999999988899999999999999999999999999
Q ss_pred CHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC---CCCeEEeecccccccCCC-
Q 006886 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ---DLNGCISDVGLAHLINFP- 491 (627)
Q Consensus 416 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~---~~~~ki~DfG~a~~~~~~- 491 (627)
+|.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 115 ~L~~~~~~~~---~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~ 188 (327)
T 3lm5_A 115 EIFSLCLPEL---AEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC 188 (327)
T ss_dssp EGGGGGSSCC----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBCCEEECCGGGCEEC----
T ss_pred cHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCCcEEEeeCccccccCCcc
Confidence 9999986432 346899999999999999999999998 999999999999998 789999999999876543
Q ss_pred --CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006886 492 --TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
....+|+.|+|||++.+..++.++||||||+++|||++|+.||..... ......+...... .. ....
T Consensus 189 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~~~~~---~~--~~~~ 257 (327)
T 3lm5_A 189 ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN------QETYLNISQVNVD---YS--EETF 257 (327)
T ss_dssp -----CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCC---CC--TTTT
T ss_pred ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc------hHHHHHHHhcccc---cC--chhh
Confidence 234589999999999999999999999999999999999999975421 1111111111100 00 0001
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
......+.+++.+||+.+|++|||++|++++
T Consensus 258 ---~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 258 ---SSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp ---TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ---cccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 1122356678889999999999999999874
No 151
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=9.9e-39 Score=326.94 Aligned_cols=250 Identities=22% Similarity=0.348 Sum_probs=191.7
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccccC---HHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAAT---KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||+|... +|+.||+|++...... .+.+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (311)
T 4agu_A 8 IGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQL-KHPNLVNLLEVFRRKRRLHLVFEYCDH 86 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhC-CCCCccchhheeecCCeEEEEEEeCCC
Confidence 478999999999999976 5899999998654332 45678899999999 899999999999999999999999999
Q ss_pred CCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006886 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
++|..++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 87 ~~l~~~~~~~-----~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 158 (311)
T 4agu_A 87 TVLHELDRYQ-----RGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY 158 (311)
T ss_dssp EHHHHHHHTS-----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred chHHHHHhhh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccc
Confidence 9999988754 35899999999999999999999998 999999999999999999999999999876532
Q ss_pred -CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhh------------cc
Q 006886 492 -TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVRE------------EW 557 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~------------~~ 557 (627)
....+|..|+|||++.+ ..++.++||||||+++|||++|+.||......+. ...+...... ..
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 235 (311)
T 4agu_A 159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ---LYLIRKTLGDLIPRHQQVFSTNQY 235 (311)
T ss_dssp -------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCSCCHHHHHHHHTCGG
T ss_pred cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhcccccccccccccccc
Confidence 23457889999999865 6789999999999999999999999976432111 1111111100 00
Q ss_pred ccc--ccchh-----hhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 558 TAE--VFDVE-----LLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 558 ~~~--~~d~~-----l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
... ..++. ..... .....+.+++.+||+.||++|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 236 FSGVKIPDPEDMEPLELKFP---NISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp GTTCCCCCCSSCCCHHHHCT---TCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccCcCCCccccchhhhhcc---cccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000 00000 00001 122356788889999999999999999874
No 152
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=6.8e-38 Score=315.15 Aligned_cols=241 Identities=19% Similarity=0.291 Sum_probs=195.9
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccc-ccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV-AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~-~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 416 (627)
.+.||+|+||.||+|..+ ++..||+|++... ....+.+.+|++++..+ +||||+++++++.+.+..++||||+++++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 92 (277)
T 3f3z_A 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL-DHPNIIRLYETFEDNTDIYLVMELCTGGE 92 (277)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCCSCB
T ss_pred eeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCeEEEEEeccCCCc
Confidence 478999999999999976 4778999998765 34567899999999999 99999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe---cCCCCeEEeecccccccCCC--
Q 006886 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL---TQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl---~~~~~~ki~DfG~a~~~~~~-- 491 (627)
|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||++ +.++.+||+|||++......
T Consensus 93 L~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~ 164 (277)
T 3f3z_A 93 LFERVVHK-----RVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 164 (277)
T ss_dssp HHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSC
T ss_pred HHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccc
Confidence 99998764 34899999999999999999999998 9999999999999 78899999999999876433
Q ss_pred -CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006886 492 -TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
....+|+.|+|||++.+ .++.++||||||+++|||++|+.||..... ......+...... ...... .
T Consensus 165 ~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~~~~~--~~~~~~---~ 232 (277)
T 3f3z_A 165 MRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTD------SEVMLKIREGTFT--FPEKDW---L 232 (277)
T ss_dssp BCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCC--CCHHHH---T
T ss_pred hhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhCCCC--CCchhh---h
Confidence 34458899999999876 489999999999999999999999975321 1111111111110 000000 0
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 571 DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
.....+.+++.+|++.+|++|||+.|++++
T Consensus 233 ---~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 233 ---NVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp ---TSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ---cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 112456778889999999999999999873
No 153
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=9.6e-39 Score=321.59 Aligned_cols=248 Identities=26% Similarity=0.432 Sum_probs=194.5
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeC-CceEEEEecCCCCCH
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSK-DEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-~~~~lv~e~~~~g~L 417 (627)
.+.||+|+||.||++..+ |+.||||+++.. ...+.+.+|++++..+ +||||+++++++... +..++||||+++|+|
T Consensus 26 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L 102 (278)
T 1byg_A 26 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKND-ATAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 102 (278)
T ss_dssp EEEEEECSSCEEEEEEET-TEEEEEEECCCC-C--HHHHHTHHHHTTC-CCTTBCCEEEEECCC--CCEEEECCCTTEEH
T ss_pred EeEEecCCCceEEEEEEc-CCEEEEEEecch-hHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCCceEEEEecCCCCCH
Confidence 478999999999999886 889999998754 3556789999999999 899999999997654 468999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC-CCCCC
Q 006886 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-TTATR 496 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~-~~~~~ 496 (627)
.+++.... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++...... ....+
T Consensus 103 ~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 176 (278)
T 1byg_A 103 VDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL 176 (278)
T ss_dssp HHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC------------C
T ss_pred HHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeeccccccccccccCCCc
Confidence 99997642 124789999999999999999999998 999999999999999999999999999766443 23456
Q ss_pred CccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHH
Q 006886 497 TIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEE 575 (627)
Q Consensus 497 t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 575 (627)
++.|+|||++.+..++.++||||||+++|||++ |+.||...... .. .... ....... .....
T Consensus 177 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~---~~---~~~~-~~~~~~~----------~~~~~ 239 (278)
T 1byg_A 177 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DV---VPRV-EKGYKMD----------APDGC 239 (278)
T ss_dssp CTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG---GH---HHHH-TTTCCCC----------CCTTC
T ss_pred cccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH---HH---HHHH-hcCCCCC----------CcccC
Confidence 788999999988899999999999999999998 99999754321 11 1111 1111000 01112
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006886 576 MVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 576 ~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~~ 612 (627)
...+.+++.+||+.+|++|||+.|+++.|++++..+.
T Consensus 240 ~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~~ 276 (278)
T 1byg_A 240 PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHEL 276 (278)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhhc
Confidence 2356778889999999999999999999999987654
No 154
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=327.64 Aligned_cols=232 Identities=20% Similarity=0.325 Sum_probs=192.8
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc---------CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEE
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---------TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv 408 (627)
.+.||+|+||.||+|+.. +++.||||++..... ..+.+.+|++++..+ +||||+++++++.+.+..++|
T Consensus 29 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~~~~~~~~lv 107 (335)
T 3dls_A 29 MSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV-EHANIIKVLDIFENQGFFQLV 107 (335)
T ss_dssp EEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred EeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEEeeCCEEEEE
Confidence 478999999999999954 688999999875431 233577899999999 999999999999999999999
Q ss_pred EecCCCC-CHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccc
Q 006886 409 YSYMPAG-SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHL 487 (627)
Q Consensus 409 ~e~~~~g-~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~ 487 (627)
|||+.+| +|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 108 ~e~~~~g~~l~~~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 179 (335)
T 3dls_A 108 MEKHGSGLDLFAFIDRH-----PRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAY 179 (335)
T ss_dssp EECCTTSCBHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEeCCCCccHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeecccceE
Confidence 9999777 999999764 35899999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCC---CCCCCccccCccccCCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccc
Q 006886 488 INFPT---TATRTIGYRAPEVTETRKA-SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFD 563 (627)
Q Consensus 488 ~~~~~---~~~~t~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 563 (627)
..... ...||+.|+|||++.+..+ +.++||||||+++|||++|+.||...... ......
T Consensus 180 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----------------~~~~~~ 242 (335)
T 3dls_A 180 LERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-----------------VEAAIH 242 (335)
T ss_dssp CCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-----------------TTTCCC
T ss_pred CCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-----------------HhhccC
Confidence 65432 3458999999999988776 78999999999999999999999642110 000000
Q ss_pred hhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 564 VELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 564 ~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
..... ..++.+++.+||+.+|++|||+.|++++
T Consensus 243 ----~~~~~---~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 243 ----PPYLV---SKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ----CSSCC---CHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ----CCccc---CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01111 2346678889999999999999999986
No 155
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=325.95 Aligned_cols=256 Identities=22% Similarity=0.390 Sum_probs=198.2
Q ss_pred hcccCcCCceeEEEEEe-cCCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCCeeeeeeEEee----CCceEEEEecC
Q 006886 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYS----KDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lv~e~~ 412 (627)
.+.||+|+||.||++.. .+++.||||++.... ...+.+.+|++++..+ +||||+++++++.. ....++|+||+
T Consensus 34 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~lv~e~~ 112 (317)
T 2buj_A 34 IQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLF-NHPNILRLVAYCLRERGAKHEAWLLLPFF 112 (317)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEEEETTEEEEEEEEECC
T ss_pred EEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhc-CCCCeeeEEEEEEeccCCCceeEEEEEeC
Confidence 47899999999999996 478999999886532 3456788999999999 99999999999873 34678999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC
Q 006886 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT 492 (627)
Q Consensus 413 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~~ 492 (627)
++|+|.+++..... ....+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 113 ~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~ 188 (317)
T 2buj_A 113 KRGTLWNEIERLKD-KGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHV 188 (317)
T ss_dssp TTCBHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCEESCEEE
T ss_pred CCCcHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcchhccccc
Confidence 99999999986432 2356899999999999999999999998 9999999999999999999999999987653211
Q ss_pred -------------CCCCCccccCccccCCCC---CCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhc
Q 006886 493 -------------TATRTIGYRAPEVTETRK---ASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREE 556 (627)
Q Consensus 493 -------------~~~~t~~y~aPE~~~~~~---~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 556 (627)
...+|+.|+|||++.+.. ++.++||||||+++|||++|+.||....... ...... ....
T Consensus 189 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~----~~~~ 263 (317)
T 2buj_A 189 EGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG-DSVALA----VQNQ 263 (317)
T ss_dssp ESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT-SCHHHH----HHCC
T ss_pred ccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc-chhhHH----hhcc
Confidence 123588999999987654 6899999999999999999999996321111 011110 1110
Q ss_pred ccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccccc
Q 006886 557 WTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRN 614 (627)
Q Consensus 557 ~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~~~~ 614 (627)
. ...........+.+++.+||+.||.+|||+.++++.|+.++......
T Consensus 264 ~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~~ 311 (317)
T 2buj_A 264 L----------SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQ 311 (317)
T ss_dssp ------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC-
T ss_pred C----------CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCCC
Confidence 0 00001112235777888999999999999999999999998765443
No 156
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=5.2e-38 Score=317.15 Aligned_cols=244 Identities=21% Similarity=0.322 Sum_probs=197.1
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccccC---HHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAAT---KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||+|..+ +++.||+|++...... .+.+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~ 89 (284)
T 3kk8_A 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFHYLVFDLVTG 89 (284)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred hhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHc-CCCCcCeEEEEEEcCCEEEEEEecCCC
Confidence 478999999999999965 5889999998765432 35678899999999 899999999999999999999999999
Q ss_pred CCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC---eEEeecccccccCCC
Q 006886 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN---GCISDVGLAHLINFP 491 (627)
Q Consensus 415 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~---~ki~DfG~a~~~~~~ 491 (627)
|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++. +||+|||++......
T Consensus 90 ~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (284)
T 3kk8_A 90 GELFEDIVAR-----EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161 (284)
T ss_dssp CBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence 9999998765 35899999999999999999999998 999999999999987665 999999999776543
Q ss_pred C---CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006886 492 T---TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 492 ~---~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
. ...+|+.|+|||++.+..++.++||||||+++|+|++|+.||..... .............. ....
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~------~~~~~~~~~~~~~~-----~~~~ 230 (284)
T 3kk8_A 162 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ------HRLYAQIKAGAYDY-----PSPE 230 (284)
T ss_dssp CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCCC-----CTTT
T ss_pred ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch------hHHHHHHHhccccC-----Cchh
Confidence 2 34578999999999999999999999999999999999999975321 11122211111100 0001
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 006886 569 YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~ 605 (627)
.... ..++.+++.+|++.+|++|||+.|++++-.
T Consensus 231 ~~~~---~~~~~~li~~~l~~dp~~Rps~~~~l~h~~ 264 (284)
T 3kk8_A 231 WDTV---TPEAKSLIDSMLTVNPKKRITADQALKVPW 264 (284)
T ss_dssp TTTS---CHHHHHHHHHHSCSSTTTSCCHHHHTTSHH
T ss_pred hccc---CHHHHHHHHHHcccChhhCCCHHHHhcCcc
Confidence 1111 234667888999999999999999988533
No 157
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=4.4e-38 Score=324.64 Aligned_cols=254 Identities=23% Similarity=0.433 Sum_probs=200.3
Q ss_pred hcccCcCCceeEEEEEec-CCcE--EEEEEecccc--cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTT--VVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~--vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.+ ++.. ||+|.+.... ...+.+.+|++++.++.+||||+++++++...+..++||||++
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~ 109 (327)
T 1fvr_A 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 109 (327)
T ss_dssp EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred eeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCC
Confidence 478999999999999965 4554 4999886532 2445788999999999889999999999999999999999999
Q ss_pred CCCHHHHhhhcC-----------CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeec
Q 006886 414 AGSLFMLLHRNR-----------SDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDV 482 (627)
Q Consensus 414 ~g~L~~~l~~~~-----------~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~Df 482 (627)
+|+|.+++.... ......+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+||
T Consensus 110 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kL~Df 186 (327)
T 1fvr_A 110 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADF 186 (327)
T ss_dssp TCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCT
T ss_pred CCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCeEEEccc
Confidence 999999997643 012346899999999999999999999998 999999999999999999999999
Q ss_pred ccccccCC---CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006886 483 GLAHLINF---PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 483 G~a~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
|+++.... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||.... .......+.. ...
T Consensus 187 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~------~~~~~~~~~~-~~~ 259 (327)
T 1fvr_A 187 GLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT------CAELYEKLPQ-GYR 259 (327)
T ss_dssp TCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHGGG-TCC
T ss_pred CcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCc------HHHHHHHhhc-CCC
Confidence 99875432 223345788999999988889999999999999999998 999997542 1111221111 100
Q ss_pred ccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006886 559 AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 559 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~~ 612 (627)
.. .... ....+.+++.+||..+|++|||+.|+++.|+++.....
T Consensus 260 ~~-------~~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 260 LE-------KPLN---CDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp CC-------CCTT---BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred CC-------CCCC---CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 00 0111 12356778889999999999999999999999876543
No 158
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=7.4e-38 Score=320.33 Aligned_cols=255 Identities=20% Similarity=0.331 Sum_probs=194.6
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|... +|+.||+|++.... ...+.+.+|++++.++ +||||+++++++...+..++||||++
T Consensus 37 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 115 (310)
T 2wqm_A 37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFIEDNELNIVLELAD 115 (310)
T ss_dssp EEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred EEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCcEEEEEecCC
Confidence 478999999999999964 78999999987532 2346788999999999 99999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|.+++..... ....+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 116 ~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 191 (310)
T 2wqm_A 116 AGDLSRMIKHFKK-QKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 191 (310)
T ss_dssp SCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC-----------
T ss_pred CCCHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCc
Confidence 9999999975321 1346899999999999999999999998 999999999999999999999999999876432
Q ss_pred --CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006886 492 --TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
....+++.|+|||++.+..++.++||||||+++|||++|+.||..... ............... ... .
T Consensus 192 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~-~~~------~ 260 (310)
T 2wqm_A 192 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLYSLCKKIEQCDYP-PLP------S 260 (310)
T ss_dssp -------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C----CHHHHHHHHHTTCSC-CCC------T
T ss_pred cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch----hHHHHHHHhhcccCC-CCc------c
Confidence 233578899999999999999999999999999999999999975321 222222222211111 000 0
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006886 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~~ 612 (627)
.. ...++.+++.+||+.||++|||+.++++.|++++...-
T Consensus 261 ~~---~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~ 300 (310)
T 2wqm_A 261 DH---YSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300 (310)
T ss_dssp TT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred cc---cCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence 11 12356678889999999999999999999999976543
No 159
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3.5e-38 Score=319.71 Aligned_cols=245 Identities=22% Similarity=0.315 Sum_probs=196.5
Q ss_pred ccCcCCceeEEEEEec---CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCC
Q 006886 341 VLGKGSYGSTYKAILE---DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 341 ~lg~G~~g~Vy~~~~~---~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 414 (627)
.||+|+||.||+|.+. +++.||||+++.... ..+++.+|++++..+ +||||+++++++ ..+..++||||+++
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~-~~~~~~lv~e~~~~ 101 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYIVRMIGIC-EAESWMLVMEMAEL 101 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTC-CCTTBCCEEEEE-ESSSEEEEEECCTT
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEE-CCCCcEEEEEeCCC
Confidence 8999999999999643 467899999875432 256789999999999 899999999998 56778999999999
Q ss_pred CCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC--
Q 006886 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT-- 492 (627)
Q Consensus 415 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~~-- 492 (627)
++|.+++... ..+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 102 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 173 (291)
T 1xbb_A 102 GPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 173 (291)
T ss_dssp EEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE
T ss_pred CCHHHHHHhC-----cCCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCc
Confidence 9999999864 34899999999999999999999998 9999999999999999999999999998764332
Q ss_pred -----CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhh
Q 006886 493 -----TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVEL 566 (627)
Q Consensus 493 -----~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 566 (627)
...+++.|+|||++.+..++.++||||||+++|||++ |+.||...... ... ..........
T Consensus 174 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~~~-~~~~~~~~~~------ 240 (291)
T 1xbb_A 174 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS------EVT-AMLEKGERMG------ 240 (291)
T ss_dssp EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH------HHH-HHHHTTCCCC------
T ss_pred ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH------HHH-HHHHcCCCCC------
Confidence 1234678999999988889999999999999999999 99999754211 111 1111111100
Q ss_pred hcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006886 567 LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 567 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~~ 612 (627)
........+.+++.+||+.||++||++.++++.|+++....-
T Consensus 241 ----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 282 (291)
T 1xbb_A 241 ----CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 282 (291)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHH
T ss_pred ----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence 001122356778889999999999999999999999865543
No 160
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.4e-38 Score=327.04 Aligned_cols=247 Identities=20% Similarity=0.241 Sum_probs=191.8
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccc------ccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEec
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV------AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~------~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||.||+|..+ ++..||+|++... ....+.+.+|++++.++ +||||+++++++.+.+..++||||
T Consensus 31 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~ 109 (345)
T 3hko_A 31 KGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL-HHPNIARLYEVYEDEQYICLVMEL 109 (345)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEEEC
T ss_pred cceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhC-CCCCcceeehhhccCCeEEEEEeC
Confidence 578999999999999965 6889999998653 12346789999999999 899999999999999999999999
Q ss_pred CCCCCHHHHhhhcCCC-----------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 006886 412 MPAGSLFMLLHRNRSD-----------------------------------GGTALDWNSRMKIALGTARGIAFIHSEGG 456 (627)
Q Consensus 412 ~~~g~L~~~l~~~~~~-----------------------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ 456 (627)
+++|+|.+++...... ....+++..++.++.|++.||.|||+.+
T Consensus 110 ~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~- 188 (345)
T 3hko_A 110 CHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG- 188 (345)
T ss_dssp CCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred CCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC-
Confidence 9999999998632110 0112457778899999999999999998
Q ss_pred CCeeecCCCCCCeEecCCC--CeEEeecccccccCC--------CCCCCCCccccCccccCC--CCCCCcchhHHHHHHH
Q 006886 457 AKFTHGNIKSSNVLLTQDL--NGCISDVGLAHLINF--------PTTATRTIGYRAPEVTET--RKASQKSDVYSFGVLL 524 (627)
Q Consensus 457 ~~ivH~Dlk~~NILl~~~~--~~ki~DfG~a~~~~~--------~~~~~~t~~y~aPE~~~~--~~~~~~~Dv~S~Gvvl 524 (627)
|+||||||+||+++.++ .+||+|||+++.... .....+|+.|+|||++.+ ..++.++||||||+++
T Consensus 189 --ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il 266 (345)
T 3hko_A 189 --ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266 (345)
T ss_dssp --EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHH
T ss_pred --ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHH
Confidence 99999999999998776 899999999986532 123457899999999865 6789999999999999
Q ss_pred HHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 525 LEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 525 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
|||++|+.||..... ............... .+. .......+.+++.+||+.+|.+||++.|++++
T Consensus 267 ~el~~g~~pf~~~~~------~~~~~~~~~~~~~~~--~~~------~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~h 331 (345)
T 3hko_A 267 HLLLMGAVPFPGVND------ADTISQVLNKKLCFE--NPN------YNVLSPLARDLLSNLLNRNVDERFDAMRALQH 331 (345)
T ss_dssp HHHHHSSCSSCCSSH------HHHHHHHHHCCCCTT--SGG------GGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHS
T ss_pred HHHHHCCCCCCCCCh------HHHHHHHHhcccccC--Ccc------cccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 999999999975421 122222222111100 010 01122356678889999999999999999873
No 161
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=5.6e-38 Score=332.51 Aligned_cols=258 Identities=17% Similarity=0.276 Sum_probs=199.0
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHHHhcc-------CCCeeeeeeEEe----eCCceE
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGK-------HSNVVPVRAYYY----SKDEKL 406 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~-------h~niv~l~~~~~----~~~~~~ 406 (627)
.+.||+|+||.||+|+.. +++.||||++.......+.+.+|++++..+.+ |+||+++++++. .....+
T Consensus 42 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~ 121 (397)
T 1wak_A 42 IRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHIC 121 (397)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEE
T ss_pred EEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEE
Confidence 478999999999999864 68899999997655556778899999999842 888999999987 455789
Q ss_pred EEEecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCCeEecCCC----------
Q 006886 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE-GGAKFTHGNIKSSNVLLTQDL---------- 475 (627)
Q Consensus 407 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dlk~~NILl~~~~---------- 475 (627)
+||||+ +|+|.+++.... ...+++..++.++.|++.||.|||++ + |+||||||+|||++.++
T Consensus 122 lv~e~~-~~~l~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~~~~~~~~~~~ 194 (397)
T 1wak_A 122 MVFEVL-GHHLLKWIIKSN---YQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNEQYIRRLAAEA 194 (397)
T ss_dssp EEECCC-CCBHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCHHHHHHHHHHH
T ss_pred EEEecc-CccHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccchhhhhhhhhh
Confidence 999999 667777665432 24589999999999999999999998 7 99999999999999775
Q ss_pred ---------------------------------------CeEEeecccccccCCC-CCCCCCccccCccccCCCCCCCcc
Q 006886 476 ---------------------------------------NGCISDVGLAHLINFP-TTATRTIGYRAPEVTETRKASQKS 515 (627)
Q Consensus 476 ---------------------------------------~~ki~DfG~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~ 515 (627)
.+||+|||+++..... ....+|+.|+|||++.+..++.++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 274 (397)
T 1wak_A 195 TEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPA 274 (397)
T ss_dssp C---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHH
T ss_pred HHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHH
Confidence 8999999999876543 345689999999999998999999
Q ss_pred hhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhh---h---------cccccccch------------------h
Q 006886 516 DVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVR---E---------EWTAEVFDV------------------E 565 (627)
Q Consensus 516 Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---~---------~~~~~~~d~------------------~ 565 (627)
|||||||++|||++|+.||......+..........+.. . ......+.. -
T Consensus 275 DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (397)
T 1wak_A 275 DIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVL 354 (397)
T ss_dssp HHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhh
Confidence 999999999999999999986554332211111111110 0 000000000 0
Q ss_pred hhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 566 LLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 566 l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
........+....+.+++.+||+.||++|||+.|++++
T Consensus 355 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 355 VEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp HHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred hhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 01112235566788899999999999999999999863
No 162
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=3.8e-38 Score=324.22 Aligned_cols=255 Identities=23% Similarity=0.365 Sum_probs=203.7
Q ss_pred hcccCcCCceeEEEEEec------CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEe
Q 006886 339 AEVLGKGSYGSTYKAILE------DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|... +++.||+|.+..... ....+.+|++++..+ +||||+++++++.+.+..++|||
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e 108 (322)
T 1p4o_A 30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF-NCHHVVRLLGVVSQGQPTLVIME 108 (322)
T ss_dssp EEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhc-CCCCEeeeEEEEccCCccEEEEE
Confidence 478999999999999864 367899999875432 345688999999999 99999999999999999999999
Q ss_pred cCCCCCHHHHhhhcCC-----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccc
Q 006886 411 YMPAGSLFMLLHRNRS-----DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLA 485 (627)
Q Consensus 411 ~~~~g~L~~~l~~~~~-----~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a 485 (627)
|+++|+|.+++..... .....+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 109 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli~~~~~~kl~Dfg~~ 185 (322)
T 1p4o_A 109 LMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMT 185 (322)
T ss_dssp CCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECTTCCEEECCTTCC
T ss_pred eCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEEcCCCeEEECcCccc
Confidence 9999999999975321 11235789999999999999999999998 999999999999999999999999999
Q ss_pred cccCCC------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006886 486 HLINFP------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 486 ~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
+..... ....+++.|+|||++.+..++.++||||||+++|||++ |+.||.... ..............
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~------~~~~~~~~~~~~~~ 259 (322)
T 1p4o_A 186 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS------NEQVLRFVMEGGLL 259 (322)
T ss_dssp CGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC------HHHHHHHHHTTCCC
T ss_pred cccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCC------HHHHHHHHHcCCcC
Confidence 865332 12235778999999988899999999999999999999 899987532 11222222111110
Q ss_pred ccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccccc
Q 006886 559 AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRN 614 (627)
Q Consensus 559 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~~~~ 614 (627)
. .. ......+.+++.+||+.+|++|||+.|+++.|+++.......
T Consensus 260 -~-------~~---~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~~~ 304 (322)
T 1p4o_A 260 -D-------KP---DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE 304 (322)
T ss_dssp -C-------CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHH
T ss_pred -C-------CC---CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCCcc
Confidence 0 00 112235677888999999999999999999999987665543
No 163
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.8e-38 Score=332.45 Aligned_cols=234 Identities=23% Similarity=0.316 Sum_probs=183.4
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc----CHHHHHHHHHHH-HHhccCCCeeeeeeEEeeCCceEEEEecC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA----TKREFEQQMEVV-GTIGKHSNVVPVRAYYYSKDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~----~~~~~~~e~~~l-~~l~~h~niv~l~~~~~~~~~~~lv~e~~ 412 (627)
.+.||+|+||.||+++.+ +++.||+|+++.... ..+.+..|..++ ..+ +||||+++++++.+.+..++||||+
T Consensus 43 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~-~hp~Iv~l~~~~~~~~~~~lv~E~~ 121 (373)
T 2r5t_A 43 LKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV-KHPFLVGLHFSFQTADKLYFVLDYI 121 (373)
T ss_dssp EEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCC-CCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhC-CCCCCCCEEEEEEeCCEEEEEEeCC
Confidence 478999999999999976 588999999976532 233455566553 445 8999999999999999999999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC--
Q 006886 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF-- 490 (627)
Q Consensus 413 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~-- 490 (627)
++|+|..++.+.. .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 122 ~gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~ 193 (373)
T 2r5t_A 122 NGGELFYHLQRER-----CFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN 193 (373)
T ss_dssp CSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC
T ss_pred CCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCccccccccCC
Confidence 9999999998643 5889999999999999999999998 99999999999999999999999999986422
Q ss_pred --CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006886 491 --PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 491 --~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+...... +
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~------~~~~~~~i~~~~~~---~------ 258 (373)
T 2r5t_A 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN------TAEMYDNILNKPLQ---L------ 258 (373)
T ss_dssp CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB------HHHHHHHHHHSCCC---C------
T ss_pred CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC------HHHHHHHHHhcccC---C------
Confidence 234568999999999999999999999999999999999999997532 12222222221100 0
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 006886 569 YQDVEEEMVQMLQIALSCVAKVPDSRPKMDD 599 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~e 599 (627)
....+ ..+.+++.+||+.||.+||++.+
T Consensus 259 ~~~~~---~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 259 KPNIT---NSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp CSSSC---HHHHHHHHHHTCSSGGGSTTTTT
T ss_pred CCCCC---HHHHHHHHHHcccCHHhCCCCCC
Confidence 11122 34567788999999999999853
No 164
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.3e-38 Score=326.07 Aligned_cols=247 Identities=22% Similarity=0.325 Sum_probs=189.1
Q ss_pred hcccCcCCceeEEEEEe-cCCcEEEEEEeccccc----CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCce----EEEE
Q 006886 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVAA----TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEK----LVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~~----~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~----~lv~ 409 (627)
.+.||+|+||.||+++. .+++.||||++..... ....+.+|++++..+ +||||+++++++...... ++||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~~~~~lv~ 95 (311)
T 3ork_A 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NHPAIVAVYDTGEAETPAGPLPYIVM 95 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCC-CCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcC-CCCCcceEEEeeeccCCCCcccEEEE
Confidence 47899999999999996 4789999999976432 234678899998888 999999999998765543 8999
Q ss_pred ecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006886 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||+++|+|.+++... ..+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 96 e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 167 (311)
T 3ork_A 96 EYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIA 167 (311)
T ss_dssp ECCCEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSCC----
T ss_pred ecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccCccccc
Confidence 999999999999864 25899999999999999999999998 9999999999999999999999999998664
Q ss_pred CC-------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006886 490 FP-------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 490 ~~-------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
.. ....||+.|+|||++.+..++.++||||||+++|||++|+.||..... .............
T Consensus 168 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~------~~~~~~~~~~~~~---- 237 (311)
T 3ork_A 168 DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP------VSVAYQHVREDPI---- 237 (311)
T ss_dssp --------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHCCCC----
T ss_pred ccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHhcCCCC----
Confidence 32 123478999999999999999999999999999999999999975321 1112222211111
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHH-HHHHhhc
Q 006886 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVV-RMIEQIQ 608 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~-~~L~~~~ 608 (627)
.+.. .... ...++.+++.+||+.||++||++.+++ ..+.++.
T Consensus 238 ~~~~-~~~~---~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 238 PPSA-RHEG---LSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp CHHH-HSTT---CCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred Cccc-ccCC---CCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 1100 0111 123566788899999999999766655 4555543
No 165
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-38 Score=330.40 Aligned_cols=244 Identities=21% Similarity=0.333 Sum_probs=195.3
Q ss_pred hcccCcCCceeEEEEEe----cCCcEEEEEEecccc-----cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEE
Q 006886 339 AEVLGKGSYGSTYKAIL----EDGTTVVVKRLREVA-----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~----~~~~~vavK~l~~~~-----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~ 409 (627)
.+.||+|+||.||+++. .+++.||||+++... ...+.+.+|++++..+.+||||+++++++...+..++||
T Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 138 (355)
T 1vzo_A 59 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLIL 138 (355)
T ss_dssp EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEE
T ss_pred EEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEe
Confidence 47899999999999997 368999999986532 234567789999999978999999999999999999999
Q ss_pred ecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006886 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||+++|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 139 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 139 DYINGGELFTHLSQR-----ERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp CCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred ecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 999999999999864 25899999999999999999999998 9999999999999999999999999997653
Q ss_pred CC-----CCCCCCccccCccccCC--CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006886 490 FP-----TTATRTIGYRAPEVTET--RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 490 ~~-----~~~~~t~~y~aPE~~~~--~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
.. ....||+.|+|||++.+ ..++.++||||||+++|||++|+.||....... ..............
T Consensus 211 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~--~~~~~~~~~~~~~~----- 283 (355)
T 1vzo_A 211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN--SQAEISRRILKSEP----- 283 (355)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC--CHHHHHHHHHHCCC-----
T ss_pred cCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc--hHHHHHHHHhccCC-----
Confidence 21 23458999999999975 347899999999999999999999997543322 22222222221110
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHHH
Q 006886 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRP-----KMDDVVRMI 604 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RP-----s~~ev~~~L 604 (627)
....+....+.+++.+||..||++|| +++|++++.
T Consensus 284 -------~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 284 -------PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred -------CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 00011223466788899999999999 999998864
No 166
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=9.7e-38 Score=340.16 Aligned_cols=244 Identities=20% Similarity=0.312 Sum_probs=197.9
Q ss_pred cccCcCCceeEEEEEec-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCC
Q 006886 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 414 (627)
+.||+|+||.||+++.+ +|+.||+|++.... ...+.+..|++++..+ +||||+++++++...+..++||||+++
T Consensus 191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~~l~lVmE~~~g 269 (543)
T 3c4z_A 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNG 269 (543)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhc-CCCCEeeEEEEEeeCCEEEEEEEeccC
Confidence 67999999999999975 68999999996542 3456788999999999 999999999999999999999999999
Q ss_pred CCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006886 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
|+|..++..... ....+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 270 g~L~~~l~~~~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~ 345 (543)
T 3c4z_A 270 GDIRYHIYNVDE-DNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345 (543)
T ss_dssp CBHHHHHHTSST-TSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCC
T ss_pred CCHHHHHHHhhc-ccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeeccCCCcc
Confidence 999999976432 2346899999999999999999999998 999999999999999999999999999876443
Q ss_pred -CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006886 492 -TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .........+...... + ..
T Consensus 346 ~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~--~~~~~~~~~i~~~~~~---~------p~ 414 (543)
T 3c4z_A 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK--VENKELKQRVLEQAVT---Y------PD 414 (543)
T ss_dssp BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCC--CCHHHHHHHHHHCCCC---C------CT
T ss_pred cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccc--hhHHHHHHHHhhcccC---C------Cc
Confidence 2346899999999999999999999999999999999999999865322 1222222222211100 0 01
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 006886 571 DVEEEMVQMLQIALSCVAKVPDSRPKM-----DDVVR 602 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~-----~ev~~ 602 (627)
.. ...+.+++.+||..||++||++ +++++
T Consensus 415 ~~---s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 415 KF---SPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp TS---CHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred cc---CHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 11 2345677889999999999975 66664
No 167
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.5e-38 Score=342.17 Aligned_cols=237 Identities=21% Similarity=0.321 Sum_probs=188.2
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||++... +|+.||||++.... .....+.+|++++..+ +||||+++++++...+..++||||++
T Consensus 153 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~ 231 (446)
T 4ejn_A 153 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-RHPFLTALKYSFQTHDRLCFVMEYAN 231 (446)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCC-SCTTSCCEEEEEEETTEEEEEECCCS
T ss_pred eEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhC-CCCeEeeEEEEEeeCCEEEEEEeeCC
Confidence 478999999999999965 68999999997542 2335677888888888 89999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC--
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHS-EGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF-- 490 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~-- 490 (627)
+|+|..++... ..+++..+..++.|++.||+|||+ .+ |+||||||+|||++.++.+||+|||+++....
T Consensus 232 ~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 303 (446)
T 4ejn_A 232 GGELFFHLSRE-----RVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 303 (446)
T ss_dssp SCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence 99999999765 358999999999999999999998 77 99999999999999999999999999986432
Q ss_pred --CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006886 491 --PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 491 --~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+...... +
T Consensus 304 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~~~~~i~~~~~~---~------ 368 (446)
T 4ejn_A 304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH------EKLFELILMEEIR---F------ 368 (446)
T ss_dssp ---CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCC---C------
T ss_pred cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH------HHHHHHHHhCCCC---C------
Confidence 2345689999999999999999999999999999999999999975321 2222222221110 0
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 006886 569 YQDVEEEMVQMLQIALSCVAKVPDSRP-----KMDDVVR 602 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~p~~RP-----s~~ev~~ 602 (627)
.... ..++.+++.+||+.||.+|| +++|+++
T Consensus 369 p~~~---~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 369 PRTL---GPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp CTTS---CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CccC---CHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 0111 23566788899999999999 9999987
No 168
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=8.7e-38 Score=314.10 Aligned_cols=237 Identities=21% Similarity=0.351 Sum_probs=174.7
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.. +++.||+|++.... ...+.+.+|+++++.+ +||||+++++++.+.+..++||||+
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~- 95 (275)
T 2eue_A 18 VKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHPHIIKLYDVIKSKDEIIMVIEYA- 95 (275)
T ss_dssp CC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSCEEEEEECC-
T ss_pred EEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhC-CCCCeEEEEEEEecCCeEEEEehhc-
Confidence 367999999999999854 68999999986542 2356788999999999 8999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 96 ~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 167 (275)
T 2eue_A 96 GNELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp CEEHHHHHHTS-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCChHhEEECCCCCEEEeecccceeccCccc
Confidence 77888888654 35899999999999999999999998 999999999999999999999999999766443
Q ss_pred -CCCCCCccccCccccCCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006886 492 -TTATRTIGYRAPEVTETRKA-SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
....+|+.|+|||++.+..+ +.++||||||+++|||++|+.||.... .............. + .
T Consensus 168 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~~~~~---~------~ 232 (275)
T 2eue_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES------IPVLFKNISNGVYT---L------P 232 (275)
T ss_dssp -------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCC---C------C
T ss_pred ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCC---C------C
Confidence 23457899999999987765 789999999999999999999997532 12222221111110 0 0
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
. .....+.+++.+|++.||++|||+.|++++
T Consensus 233 ~---~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 233 K---FLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp T---TSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred c---cCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 1 112346678889999999999999999764
No 169
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=6.8e-38 Score=316.58 Aligned_cols=241 Identities=20% Similarity=0.310 Sum_probs=194.5
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||+|... +++.||+|++.... ....++.+|+..+..+.+||||+++++++.+.+..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 95 (289)
T 1x8b_A 16 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNG 95 (289)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred hhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCC
Confidence 478999999999999976 78999999987542 23567888999998888999999999999999999999999999
Q ss_pred CCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC-------------------C
Q 006886 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD-------------------L 475 (627)
Q Consensus 415 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~-------------------~ 475 (627)
|+|.+++..... ....+++..++.++.|++.||.|||+.+ |+||||||+||+++.+ .
T Consensus 96 ~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~ 171 (289)
T 1x8b_A 96 GSLADAISENYR-IMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV 171 (289)
T ss_dssp CBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC--------------------CC
T ss_pred CcHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCcccccccccccccCCce
Confidence 999999976421 1235899999999999999999999998 9999999999999844 4
Q ss_pred CeEEeecccccccCCCCCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhh
Q 006886 476 NGCISDVGLAHLINFPTTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVR 554 (627)
Q Consensus 476 ~~ki~DfG~a~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 554 (627)
.+||+|||.+..........+|+.|+|||++.+. .++.++||||||+++|||++|..|+.... . .....
T Consensus 172 ~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~--------~-~~~~~- 241 (289)
T 1x8b_A 172 MFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD--------Q-WHEIR- 241 (289)
T ss_dssp CEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH--------H-HHHHH-
T ss_pred EEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh--------H-HHHHH-
Confidence 7899999999988777777799999999999765 56689999999999999999988764321 0 11111
Q ss_pred hcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 555 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
....... .... ...+.+++.+||+.||++|||+.|++++
T Consensus 242 ~~~~~~~-------~~~~---~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 242 QGRLPRI-------PQVL---SQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp TTCCCCC-------SSCC---CHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred cCCCCCC-------Cccc---CHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 1111110 0111 2356678889999999999999999764
No 170
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2.2e-38 Score=338.70 Aligned_cols=193 Identities=23% Similarity=0.326 Sum_probs=170.2
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHHHhc-----cCCCeeeeeeEEeeCCceEEEEecC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIG-----KHSNVVPVRAYYYSKDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~-----~h~niv~l~~~~~~~~~~~lv~e~~ 412 (627)
.+.||+|+||.||+|... +++.||||+++......+.+..|++++..+. .|+||+++++++...+..++||||+
T Consensus 102 ~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~ 181 (429)
T 3kvw_A 102 LKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELL 181 (429)
T ss_dssp EEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCC
T ss_pred EEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEecc
Confidence 478999999999999865 5889999999765555677888998888874 5779999999999999999999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC--eEEeecccccccCC
Q 006886 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN--GCISDVGLAHLINF 490 (627)
Q Consensus 413 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~--~ki~DfG~a~~~~~ 490 (627)
. ++|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||+++....
T Consensus 182 ~-~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~ 254 (429)
T 3kvw_A 182 S-MNLYELIKKNKF---QGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ 254 (429)
T ss_dssp C-CBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred C-CCHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeecccceecCC
Confidence 6 699999986532 35899999999999999999999998 999999999999999987 99999999977654
Q ss_pred C-CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 006886 491 P-TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSG 538 (627)
Q Consensus 491 ~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~ 538 (627)
. .+..+|+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 255 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 255 RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 3 35568999999999999899999999999999999999999997643
No 171
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=5.5e-38 Score=338.60 Aligned_cols=251 Identities=22% Similarity=0.288 Sum_probs=186.5
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCCeeeeeeEEeeC------CceEEE
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSK------DEKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~------~~~~lv 408 (627)
.+.||+|+||.||+|+.. +++.||||++..... ..+.+.+|+++++.+ +||||+++++++... ...++|
T Consensus 67 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~~~~~~~lv 145 (464)
T 3ttj_A 67 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLV 145 (464)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCCSTTTCCEEEEE
T ss_pred EEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhC-CCCCCCcEEEEEccCCccccCCeEEEE
Confidence 478999999999999865 688999999975432 345788999999999 999999999999754 356999
Q ss_pred EecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006886 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 409 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~ 488 (627)
|||+++ +|.+.+.. .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 146 ~E~~~~-~l~~~~~~-------~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 214 (464)
T 3ttj_A 146 MELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 214 (464)
T ss_dssp EECCSE-EHHHHHTS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCCC---
T ss_pred EeCCCC-CHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEeeeec
Confidence 999976 56666642 3899999999999999999999998 999999999999999999999999999877
Q ss_pred CCC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHH---------------
Q 006886 489 NFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVR--------------- 550 (627)
Q Consensus 489 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~--------------- 550 (627)
... ....||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+..+ .+...+.
T Consensus 215 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~--~~~~i~~~lg~p~~~~~~~~~~ 292 (464)
T 3ttj_A 215 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID--QWNKVIEQLGTPCPEFMKKLQP 292 (464)
T ss_dssp --CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHHHCSCCHHHHTTSCH
T ss_pred CCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHhcCCCCHHHHHHcch
Confidence 543 34568999999999999999999999999999999999999997643211 0000000
Q ss_pred ---HHhhhccc-c-----cccchhhhcCC--ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 551 ---SVVREEWT-A-----EVFDVELLKYQ--DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 551 ---~~~~~~~~-~-----~~~d~~l~~~~--~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
........ . ..+...+.... .......++.+++.+||..||++|||++|++++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 293 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000 0 00000000000 011124567889999999999999999999874
No 172
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.7e-38 Score=328.59 Aligned_cols=255 Identities=13% Similarity=0.157 Sum_probs=197.3
Q ss_pred hcccCcCCceeEEEEEecC---------CcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeee---------------
Q 006886 339 AEVLGKGSYGSTYKAILED---------GTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVP--------------- 394 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~---------~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~--------------- 394 (627)
.+.||+|+||.||+|+... ++.||+|.+... +.+.+|++++.++ +||||++
T Consensus 47 ~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~i~~ 121 (352)
T 2jii_A 47 KSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRA-AKPLQVNKWKKLYSTPLLAIPT 121 (352)
T ss_dssp EEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHH-CCHHHHHHHHHHTTCTTCSCCC
T ss_pred EEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHh-cccchhhhhhhhccCCccCccc
Confidence 4789999999999999763 789999998643 4688999999999 8999887
Q ss_pred eeeEEee-CCceEEEEecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC
Q 006886 395 VRAYYYS-KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ 473 (627)
Q Consensus 395 l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~ 473 (627)
+++++.. +...++||||+ +|+|.+++.... ...+++..++.++.|++.||.|||+.+ |+||||||+|||++.
T Consensus 122 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIl~~~ 194 (352)
T 2jii_A 122 CMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP---KHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENIFVDP 194 (352)
T ss_dssp CCEEEEETTTEEEEEEECC-CEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGGEEEET
T ss_pred hhhccccCCcEEEEEecCC-CcCHHHHHHhCC---cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEEcC
Confidence 5677766 67789999999 999999998642 246999999999999999999999998 999999999999999
Q ss_pred CC--CeEEeecccccccCCC-----------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCC
Q 006886 474 DL--NGCISDVGLAHLINFP-----------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHD 540 (627)
Q Consensus 474 ~~--~~ki~DfG~a~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~ 540 (627)
++ .+||+|||+++..... ....+|+.|+|||++.+..++.++||||||+++|||++|+.||......
T Consensus 195 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 274 (352)
T 2jii_A 195 EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN 274 (352)
T ss_dssp TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcC
Confidence 98 8999999999765321 2235789999999999999999999999999999999999999754321
Q ss_pred CCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccc
Q 006886 541 DVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPEL 612 (627)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~~ 612 (627)
. ..+....... ... .....+.. ...... ..++.+++.+||..||++|||+.++++.|+++.....
T Consensus 275 ~-~~~~~~~~~~-~~~-~~~~~~~~-~~~~~~---~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 275 T-EDIMKQKQKF-VDK-PGPFVGPC-GHWIRP---SETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp H-HHHHHHHHHH-HHS-CCCEECTT-SCEECC---CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred H-HHHHHHHHhc-cCC-hhhhhhhc-cccCCC---cHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence 1 1111111111 111 11111100 000111 2356678889999999999999999999999875543
No 173
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=3.2e-37 Score=312.45 Aligned_cols=242 Identities=24% Similarity=0.388 Sum_probs=192.2
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCCeeeeeeEEee----CCceEEEEe
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYS----KDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lv~e 410 (627)
.+.||+|+||.||+|... ++..||+|++..... ..+.+.+|++++..+ +||||+++++++.. ....++|||
T Consensus 31 ~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~lv~e 109 (290)
T 1t4h_A 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKCIVLVTE 109 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEESSSCEEEEEEEE
T ss_pred eeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhC-CCCCeeeeeeeeccccCCCceEEEEEE
Confidence 367999999999999965 578899999875433 345688999999999 99999999999875 345789999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEec-CCCCeEEeecccccccC
Q 006886 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLT-QDLNGCISDVGLAHLIN 489 (627)
Q Consensus 411 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~-~~~~~ki~DfG~a~~~~ 489 (627)
|+++|+|.+++... ..+++..++.++.|++.||.|||+.+ ++|+||||||+||+++ .++.+||+|||++....
T Consensus 110 ~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 110 LMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp CCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred ecCCCCHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence 99999999999864 35899999999999999999999986 4699999999999998 78999999999997654
Q ss_pred CCC--CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006886 490 FPT--TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 490 ~~~--~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
... ...+|+.|+|||++.+ .++.++||||||+++|+|++|+.||.... ............. ....++
T Consensus 184 ~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~-----~~~~~~~~~~~~~-~~~~~~---- 252 (290)
T 1t4h_A 184 ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ-----NAAQIYRRVTSGV-KPASFD---- 252 (290)
T ss_dssp TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS-----SHHHHHHHHTTTC-CCGGGG----
T ss_pred ccccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcC-----cHHHHHHHHhccC-CccccC----
Confidence 432 3457899999998864 58999999999999999999999997532 1122222211111 111111
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
.....++.+++.+||+.+|++|||+.|++++
T Consensus 253 -----~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 253 -----KVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp -----GCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -----CCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 0111356788889999999999999999763
No 174
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.6e-37 Score=323.55 Aligned_cols=242 Identities=19% Similarity=0.371 Sum_probs=194.9
Q ss_pred cccCcCCceeEEEEEec-CCcEEEEEEeccccc---------CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEE
Q 006886 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---------TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVY 409 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~ 409 (627)
+.||+|+||.||+|+.+ +|+.||||++..... ..+.+.+|+.++..+.+||||+++++++......++||
T Consensus 100 ~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 179 (365)
T 2y7j_A 100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVF 179 (365)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEE
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEE
Confidence 78999999999999976 699999999865431 13567889999999978999999999999999999999
Q ss_pred ecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006886 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||+++|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 180 e~~~g~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~ 251 (365)
T 2y7j_A 180 DLMRKGELFDYLTEK-----VALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLE 251 (365)
T ss_dssp CCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEEecCcccccC
Confidence 999999999999764 35899999999999999999999998 9999999999999999999999999998765
Q ss_pred CC---CCCCCCccccCccccCC------CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccc
Q 006886 490 FP---TTATRTIGYRAPEVTET------RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAE 560 (627)
Q Consensus 490 ~~---~~~~~t~~y~aPE~~~~------~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (627)
.. ....||+.|+|||++.+ ..++.++||||||+++|||++|+.||.... .......+......
T Consensus 252 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~------~~~~~~~i~~~~~~-- 323 (365)
T 2y7j_A 252 PGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR------QILMLRMIMEGQYQ-- 323 (365)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCC--
T ss_pred CCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhCCCC--
Confidence 43 33468999999999853 357899999999999999999999997532 11111111111100
Q ss_pred ccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 561 VFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 561 ~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
...+.. . .....+.+++.+||..||++|||+.|++++
T Consensus 324 ~~~~~~---~---~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 324 FSSPEW---D---DRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp CCHHHH---S---SSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCccc---c---cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 000000 1 112356778889999999999999999873
No 175
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1e-37 Score=313.52 Aligned_cols=241 Identities=22% Similarity=0.368 Sum_probs=194.6
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|..+ +++.||+|++.... ...+.+.+|++++..+ +||||+++++++.+.+..++|+||++++
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 90 (276)
T 2yex_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGG 90 (276)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred EEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhc-CCCCceeeeeEEEcCCEEEEEEEecCCC
Confidence 478999999999999976 68999999986543 2356789999999999 9999999999999999999999999999
Q ss_pred CHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC-----
Q 006886 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF----- 490 (627)
Q Consensus 416 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~----- 490 (627)
+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||.+.....
T Consensus 91 ~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 162 (276)
T 2yex_A 91 ELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (276)
T ss_dssp EGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred cHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccCCCcchh
Confidence 999998643 35899999999999999999999998 99999999999999999999999999976532
Q ss_pred -CCCCCCCccccCccccCCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006886 491 -PTTATRTIGYRAPEVTETRKA-SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 491 -~~~~~~t~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
.....+++.|+|||++.+..+ +.++||||||+++|||++|+.||........ ....+ ...... ..
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~----~~~~~~---~~----- 229 (276)
T 2yex_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSDW----KEKKTY---LN----- 229 (276)
T ss_dssp CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH-HHHHH----HTTCTT---ST-----
T ss_pred cccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH-HHHHh----hhcccc---cC-----
Confidence 233457899999999987665 7789999999999999999999976432211 11111 111000 00
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 569 YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
........+.+++.+||..+|++|||+.|++++
T Consensus 230 --~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 230 --PWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp --TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred --chhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 001112356678889999999999999999763
No 176
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.3e-38 Score=324.53 Aligned_cols=254 Identities=23% Similarity=0.406 Sum_probs=198.5
Q ss_pred hcccCcCCceeEEEEEe-----cCCcEEEEEEeccccc-CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCC--ceEEEEe
Q 006886 339 AEVLGKGSYGSTYKAIL-----EDGTTVVVKRLREVAA-TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD--EKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-----~~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~--~~~lv~e 410 (627)
.+.||+|+||.||++++ .+++.||||++..... ..+.+.+|++++..+ +||||+++++++...+ ..++|+|
T Consensus 46 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~e 124 (326)
T 2w1i_A 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGRRNLKLIME 124 (326)
T ss_dssp EEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTC-CCTTBCCEEEEECC----CCEEEEC
T ss_pred eeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEEecCCCceEEEEE
Confidence 47899999999999984 3688999999876432 346789999999999 8999999999987654 6789999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC
Q 006886 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF 490 (627)
Q Consensus 411 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~ 490 (627)
|+++|+|.+++.... ..+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 125 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~ 197 (326)
T 2w1i_A 125 YLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ 197 (326)
T ss_dssp CCTTCBHHHHHHHST----TSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECCS
T ss_pred CCCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchhhccc
Confidence 999999999998652 35899999999999999999999998 99999999999999999999999999987644
Q ss_pred CC-------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC--------CCCC-CCHHHHHHHHhh
Q 006886 491 PT-------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSG--------HDDV-VDLPRWVRSVVR 554 (627)
Q Consensus 491 ~~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~--------~~~~-~~~~~~~~~~~~ 554 (627)
.. ...++..|+|||++.+..++.++||||||+++|||++|..|+.... .... ......+...+.
T Consensus 198 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (326)
T 2w1i_A 198 DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 277 (326)
T ss_dssp SCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred cccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhh
Confidence 32 2235677999999988889999999999999999999999876321 0000 000000011111
Q ss_pred hcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006886 555 EEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 555 ~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~ 610 (627)
.... .........++.+++.+||+.+|++|||+.|+++.|++++..
T Consensus 278 ~~~~----------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 278 NNGR----------LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp TTCC----------CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCC----------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 1000 001112234577788899999999999999999999998653
No 177
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.3e-37 Score=321.18 Aligned_cols=252 Identities=23% Similarity=0.353 Sum_probs=198.1
Q ss_pred hcccCcCCceeEEEEEec------CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEe
Q 006886 339 AEVLGKGSYGSTYKAILE------DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~------~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|++. ++..||||++.... .....+.+|+.++.++ +||||+++++++...+..++|||
T Consensus 35 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e 113 (327)
T 2yfx_A 35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-NHQNIVRCIGVSLQSLPRFILME 113 (327)
T ss_dssp EEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEEEE
T ss_pred EEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhC-CCCCCCeEEEEEcCCCCcEEEEe
Confidence 478999999999999842 46789999986432 2345788999999999 99999999999999999999999
Q ss_pred cCCCCCHHHHhhhcCCC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC---CCCeEEeecccc
Q 006886 411 YMPAGSLFMLLHRNRSD--GGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ---DLNGCISDVGLA 485 (627)
Q Consensus 411 ~~~~g~L~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~---~~~~ki~DfG~a 485 (627)
|+++|+|.+++...... ....+++..++.++.|++.||.|||+.+ |+||||||+|||++. +..+||+|||++
T Consensus 114 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~ 190 (327)
T 2yfx_A 114 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190 (327)
T ss_dssp CCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECCCHHH
T ss_pred cCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEECccccc
Confidence 99999999999875421 1245899999999999999999999998 999999999999994 456999999998
Q ss_pred cccCCC------CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006886 486 HLINFP------TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 486 ~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
+..... ....+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ......+......
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~------~~~~~~~~~~~~~ 264 (327)
T 2yfx_A 191 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN------QEVLEFVTSGGRM 264 (327)
T ss_dssp HHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH------HHHHHHHHTTCCC
T ss_pred cccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH------HHHHHHHhcCCCC
Confidence 754322 23346789999999988899999999999999999998 9999975321 1112211111110
Q ss_pred ccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccc
Q 006886 559 AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPE 611 (627)
Q Consensus 559 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~ 611 (627)
. .. ......+.+++.+||+.+|.+||++.|++++|+.+....
T Consensus 265 -~-------~~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 265 -D-------PP---KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp -C-------CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred -C-------CC---CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 0 00 112235677888999999999999999999999986554
No 178
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=9.1e-38 Score=326.73 Aligned_cols=190 Identities=22% Similarity=0.359 Sum_probs=168.2
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||++... +++.||+|++.... ...+.+.+|++++..+ +||||+++++++..++..++||||+++|
T Consensus 38 ~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 116 (360)
T 3eqc_A 38 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISICMEHMDGG 116 (360)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEETTEEEEEECCCTTC
T ss_pred eeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHC-CCCCEEEEeEEEEECCEEEEEEECCCCC
Confidence 468999999999999976 68999999987542 2346788999999999 9999999999999999999999999999
Q ss_pred CHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCCeEecCCCCeEEeecccccccC--CCC
Q 006886 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE-GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN--FPT 492 (627)
Q Consensus 416 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~--~~~ 492 (627)
+|.+++.... .+++..+..++.+++.||.|||+. + |+||||||+|||++.++.+||+|||++.... ...
T Consensus 117 ~L~~~l~~~~-----~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 188 (360)
T 3eqc_A 117 SLDQVLKKAG-----RIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 188 (360)
T ss_dssp BHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC--
T ss_pred CHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCccccccccc
Confidence 9999998653 489999999999999999999996 7 9999999999999999999999999987553 233
Q ss_pred CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 006886 493 TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHS 537 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~ 537 (627)
...+|+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 189 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 233 (360)
T 3eqc_A 189 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233 (360)
T ss_dssp --CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred CCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 456899999999999999999999999999999999999999754
No 179
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=3.9e-37 Score=334.92 Aligned_cols=241 Identities=21% Similarity=0.312 Sum_probs=196.1
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccc---ccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV---AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||+||+++.+ +++.||||++... ......+.+|++++.++ +||||+++++++......++|+||+++
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~ 105 (486)
T 3mwu_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHPNIMKLFEILEDSSSFYIVGELYTG 105 (486)
T ss_dssp EEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhC-CCCCcCeEEEEEEcCCEEEEEEEcCCC
Confidence 578999999999999975 6899999998643 23567899999999999 999999999999999999999999999
Q ss_pred CCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEec---CCCCeEEeecccccccCCC
Q 006886 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLT---QDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 415 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~---~~~~~ki~DfG~a~~~~~~ 491 (627)
|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++ .++.+||+|||+++.....
T Consensus 106 ~~L~~~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 177 (486)
T 3mwu_A 106 GELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (486)
T ss_dssp CBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC
Confidence 9999998765 35899999999999999999999998 99999999999995 4567999999999876543
Q ss_pred ---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006886 492 ---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 492 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
....||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... ......+........ ...
T Consensus 178 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~~~~~~~-----~~~ 245 (486)
T 3mwu_A 178 TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE------YDILKRVETGKYAFD-----LPQ 245 (486)
T ss_dssp ----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCCSC-----SGG
T ss_pred CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCCCCC-----Ccc
Confidence 24468999999999876 599999999999999999999999975421 122222222111110 001
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 569 YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
.. ....++.+++.+||..+|.+|||+.|++++
T Consensus 246 ~~---~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 246 WR---TISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp GG---GSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred cC---CCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11 112346678889999999999999999985
No 180
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.7e-37 Score=313.52 Aligned_cols=238 Identities=21% Similarity=0.342 Sum_probs=196.7
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccc----ccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV----AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~----~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|... +++.||+|++... ....+.+.+|++++..+ +||||+++++++.+.+..++||||++
T Consensus 19 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 97 (284)
T 2vgo_A 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RHPNILRMYNYFHDRKRIYLMLEFAP 97 (284)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred eheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcC-CCCCEeeEEEEEEcCCEEEEEEEeCC
Confidence 478999999999999976 5788999998643 23456789999999999 89999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+|+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 98 ~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 169 (284)
T 2vgo_A 98 RGELYKELQKHG-----RFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR 169 (284)
T ss_dssp TEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEECSSSCB
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccCccccc
Confidence 999999998652 4899999999999999999999998 999999999999999999999999998765432
Q ss_pred CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006886 492 TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
....+++.|+|||++.+..++.++||||||+++|||++|+.||..... ......+..... . ....
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~~~~~-------~--~~~~ 234 (284)
T 2vgo_A 170 RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH------TETHRRIVNVDL-------K--FPPF 234 (284)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHTTCC-------C--CCTT
T ss_pred ccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH------hHHHHHHhcccc-------C--CCCc
Confidence 344678999999999998999999999999999999999999975321 111111111110 0 0011
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
. ...+.+++.+|++.+|.+||++.|++++
T Consensus 235 ~---~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 235 L---SDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp S---CHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred C---CHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 1 2346678889999999999999999874
No 181
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.6e-38 Score=322.11 Aligned_cols=251 Identities=24% Similarity=0.383 Sum_probs=190.0
Q ss_pred hcccCcCCceeEEEEEec--CCc--EEEEEEecccc----cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEe
Q 006886 339 AEVLGKGSYGSTYKAILE--DGT--TVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~--~~~--~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|.+. +++ .||||+++... ...+.+.+|++++..+ +||||+++++++.... .++|+|
T Consensus 23 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~-~~~v~e 100 (291)
T 1u46_A 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRLYGVVLTPP-MKMVTE 100 (291)
T ss_dssp EEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSS-CEEEEE
T ss_pred eeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhC-CCCCcccEEEEEccCC-ceeeEe
Confidence 478999999999999853 233 68999986542 2346788999999999 8999999999988654 789999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC
Q 006886 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF 490 (627)
Q Consensus 411 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~ 490 (627)
|+++|+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 101 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 101 LAPLGSLLDRLRKHQ----GHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp CCTTCBHHHHHHHHG----GGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred cccCCCHHHHHHhcc----CCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEccccccccccc
Confidence 999999999998642 35899999999999999999999998 99999999999999999999999999987643
Q ss_pred CC-------CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006886 491 PT-------TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 491 ~~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
.. ...++..|+|||++.+..++.++||||||+++|||++ |+.||..... ......+.......
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~------~~~~~~~~~~~~~~--- 244 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG------SQILHKIDKEGERL--- 244 (291)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHHHTSCCCC---
T ss_pred cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH------HHHHHHHHccCCCC---
Confidence 22 2335778999999988889999999999999999999 9999975421 22222222111110
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccccc
Q 006886 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRN 614 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~~~~ 614 (627)
.........+.+++.+||..+|++|||+.++++.|+++.....+.
T Consensus 245 -------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 289 (291)
T 1u46_A 245 -------PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMRA 289 (291)
T ss_dssp -------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC------
T ss_pred -------CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccchhh
Confidence 001122345677888999999999999999999999998766543
No 182
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=2.9e-37 Score=318.80 Aligned_cols=250 Identities=18% Similarity=0.276 Sum_probs=192.3
Q ss_pred hcccCcCCceeEEEEEe-cCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEee--CCceEEEEecCCCC
Q 006886 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS--KDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~--~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|+. .+++.||||++.. ...+.+.+|++++..+..||||+++++++.. ....++||||++++
T Consensus 41 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~ 118 (330)
T 3nsz_A 41 VRKLGRGKYSEVFEAINITNNEKVVVKILKP--VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNT 118 (330)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECS--CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCC
T ss_pred EEEecccCCeEEEEEEECCCCcEEEEEEecc--cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCch
Confidence 47899999999999986 4689999999864 3467899999999999669999999999987 56789999999999
Q ss_pred CHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC-CeEEeecccccccCCC---
Q 006886 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL-NGCISDVGLAHLINFP--- 491 (627)
Q Consensus 416 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~-~~ki~DfG~a~~~~~~--- 491 (627)
+|.+++.. +++..+..++.|++.||.|||+.+ |+||||||+|||++.++ .+||+|||+++.....
T Consensus 119 ~l~~~~~~--------~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~ 187 (330)
T 3nsz_A 119 DFKQLYQT--------LTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY 187 (330)
T ss_dssp CHHHHGGG--------CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCC
T ss_pred hHHHHHHh--------CCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCcc
Confidence 99998852 788999999999999999999998 99999999999999777 8999999999876433
Q ss_pred CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccc-------ccc
Q 006886 492 TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAE-------VFD 563 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d 563 (627)
....++..|+|||++.+ ..++.++||||||+++|||++|+.||...... ...+..... ........+ ..+
T Consensus 188 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~-~~~l~~~~~-~~~~~~~~~~~~~~~~~~~ 265 (330)
T 3nsz_A 188 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-YDQLVRIAK-VLGTEDLYDYIDKYNIELD 265 (330)
T ss_dssp CSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH-HHHHHHHHH-HHCHHHHHHHHHHTTCCCC
T ss_pred ccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch-HHHHHHHHH-hcCCchhhhHHHHhccccc
Confidence 33457889999999876 67899999999999999999999999643211 001111000 000000000 000
Q ss_pred hh---------------hhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 564 VE---------------LLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 564 ~~---------------l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
+. ............++.+++.+||+.||++|||++|++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 266 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp THHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00 00001111123467788889999999999999999873
No 183
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=8e-38 Score=332.41 Aligned_cols=194 Identities=23% Similarity=0.425 Sum_probs=153.5
Q ss_pred hcccCcCCceeEEEEEec---CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEee--CCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE---DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS--KDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~---~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~--~~~~~lv~e~~~ 413 (627)
.++||+|+||.||+|+.+ +++.||||++.... ....+.+|++++..+ +||||+++++++.. ....++||||++
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~lv~e~~~ 103 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG-ISMSACREIALLREL-KHPNVISLQKVFLSHADRKVWLLFDYAE 103 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSS-CCHHHHHHHHHHHHC-CCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC-CCHHHHHHHHHHHhc-CCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence 467999999999999965 47889999997543 345688999999999 89999999999964 667899999996
Q ss_pred CCCHHHHhhhcCC----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe----cCCCCeEEeecccc
Q 006886 414 AGSLFMLLHRNRS----DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL----TQDLNGCISDVGLA 485 (627)
Q Consensus 414 ~g~L~~~l~~~~~----~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl----~~~~~~ki~DfG~a 485 (627)
|+|.+++..... .....+++..++.++.|++.||.|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 104 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 179 (405)
T 3rgf_A 104 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 179 (405)
T ss_dssp -EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCEEECCTTCC
T ss_pred -CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcEEEEECCCc
Confidence 588888764321 11235899999999999999999999998 9999999999999 77899999999999
Q ss_pred cccCCC-------CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 006886 486 HLINFP-------TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSG 538 (627)
Q Consensus 486 ~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~ 538 (627)
+..... ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 240 (405)
T 3rgf_A 180 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 240 (405)
T ss_dssp C----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred eecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence 876432 23457899999999877 458999999999999999999999997654
No 184
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.6e-37 Score=316.87 Aligned_cols=242 Identities=21% Similarity=0.370 Sum_probs=194.8
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc-CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA-TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 416 (627)
.+.||+|+||.||+++.. +|+.||+|+++.... ..+.+.+|++++..+ +||||+++++++.+.+..++||||+++|+
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 92 (304)
T 2jam_A 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKI-KHENIVTLEDIYESTTHYYLVMQLVSGGE 92 (304)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHC-CCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred eeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhC-CCCCeeehhhhcccCCEEEEEEEcCCCcc
Confidence 578999999999999975 689999999975432 345688999999999 99999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe---cCCCCeEEeecccccccCCCC-
Q 006886 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL---TQDLNGCISDVGLAHLINFPT- 492 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl---~~~~~~ki~DfG~a~~~~~~~- 492 (627)
|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||++ +.++.+||+|||+++......
T Consensus 93 L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 164 (304)
T 2jam_A 93 LFDRILER-----GVYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM 164 (304)
T ss_dssp HHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTT
T ss_pred HHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCcc
Confidence 99999764 25899999999999999999999998 9999999999999 788999999999997654322
Q ss_pred -CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006886 493 -TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 493 -~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
...+++.|+|||++.+..++.++||||||+++|||++|+.||..... ......+...... +... ..
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~i~~~~~~---~~~~--~~-- 231 (304)
T 2jam_A 165 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE------SKLFEKIKEGYYE---FESP--FW-- 231 (304)
T ss_dssp HHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHCCCC---CCTT--TT--
T ss_pred ccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHHcCCCC---CCcc--cc--
Confidence 23478999999999999999999999999999999999999975321 1122222111110 0000 00
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
......+.+++.+|+..||++|||+.|++++
T Consensus 232 -~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 232 -DDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp -TTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred -ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1122356778889999999999999999874
No 185
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1e-37 Score=350.81 Aligned_cols=238 Identities=23% Similarity=0.329 Sum_probs=196.4
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccc----ccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV----AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~----~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.+ +++.||||+++.. ....+.+..|.+++..+.+||+|+.+++++.+.+..++||||++
T Consensus 346 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~ 425 (674)
T 3pfq_A 346 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 425 (674)
T ss_dssp EEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCC
T ss_pred EEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcC
Confidence 478999999999999976 5788999999753 23446678889999888789999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC---
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF--- 490 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~--- 490 (627)
+|+|..++.... .+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 426 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~ 497 (674)
T 3pfq_A 426 GGDLMYHIQQVG-----RFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 497 (674)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCEECCCTTC
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceeeccccCCc
Confidence 999999998652 5899999999999999999999998 99999999999999999999999999986422
Q ss_pred -CCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006886 491 -PTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 491 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
..+..||+.|+|||++.+..++.++|||||||++|||++|+.||...+. ......+...... + .
T Consensus 498 ~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~------~~~~~~i~~~~~~---~------p 562 (674)
T 3pfq_A 498 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE------DELFQSIMEHNVA---Y------P 562 (674)
T ss_dssp CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHSSCCC---C------C
T ss_pred ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH------HHHHHHHHhCCCC---C------C
Confidence 2345689999999999999999999999999999999999999975421 2222222221110 0 0
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 006886 570 QDVEEEMVQMLQIALSCVAKVPDSRPKM-----DDVVR 602 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~-----~ev~~ 602 (627)
... ..++.+++.+||+.||++||++ +||++
T Consensus 563 ~~~---s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 563 KSM---SKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp TTS---CHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred ccC---CHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 111 2346678889999999999998 67765
No 186
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=8.4e-38 Score=323.65 Aligned_cols=254 Identities=20% Similarity=0.306 Sum_probs=197.6
Q ss_pred hcccCcCCceeEEEEEe-c-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCC------CeeeeeeEEeeCCceEEEEe
Q 006886 339 AEVLGKGSYGSTYKAIL-E-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHS------NVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~------niv~l~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|.. + +++.||||+++......+.+.+|++++..+ +|+ +++++++++...+..++|||
T Consensus 19 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l-~~~~~~~~~~i~~~~~~~~~~~~~~lv~e 97 (339)
T 1z57_A 19 VDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHL-NTTDPNSTFRCVQMLEWFEHHGHICIVFE 97 (339)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHH-HHHCTTCTTCBCCEEEEEEETTEEEEEEE
T ss_pred EEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHh-hhcCCCCceeeEeeecccccCCcEEEEEc
Confidence 47899999999999986 3 688999999976555567788999999888 444 59999999999999999999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC-----------------
Q 006886 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ----------------- 473 (627)
Q Consensus 411 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~----------------- 473 (627)
|+ +++|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.
T Consensus 98 ~~-~~~l~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~ 170 (339)
T 1z57_A 98 LL-GLSTYDFIKENG---FLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170 (339)
T ss_dssp CC-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred CC-CCCHHHHHHhcC---CCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCcccccccc
Confidence 99 889999997653 246899999999999999999999998 999999999999987
Q ss_pred --CCCeEEeecccccccCCC-CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHH
Q 006886 474 --DLNGCISDVGLAHLINFP-TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVR 550 (627)
Q Consensus 474 --~~~~ki~DfG~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~ 550 (627)
++.+||+|||+++..... ....+|+.|+|||++.+..++.++||||||+++|||++|+.||......+ ....+.
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~---~~~~~~ 247 (339)
T 1z57_A 171 LINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE---HLAMME 247 (339)
T ss_dssp ESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH---HHHHHH
T ss_pred ccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH---HHHHHH
Confidence 678999999999876543 34568999999999999999999999999999999999999997543211 111111
Q ss_pred HHhhh--------ccccccc---------------------chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 006886 551 SVVRE--------EWTAEVF---------------------DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVV 601 (627)
Q Consensus 551 ~~~~~--------~~~~~~~---------------------d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~ 601 (627)
..... ......+ .+.............++.+++.+||+.||++|||+.|++
T Consensus 248 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell 327 (339)
T 1z57_A 248 RILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREAL 327 (339)
T ss_dssp HHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred HHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHh
Confidence 11100 0000000 000000111234456788899999999999999999997
Q ss_pred HH
Q 006886 602 RM 603 (627)
Q Consensus 602 ~~ 603 (627)
++
T Consensus 328 ~h 329 (339)
T 1z57_A 328 KH 329 (339)
T ss_dssp TS
T ss_pred cC
Confidence 64
No 187
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=5.6e-39 Score=338.00 Aligned_cols=237 Identities=14% Similarity=0.179 Sum_probs=183.0
Q ss_pred hcccCcCCceeEEEEEe-cCCcEEEEEEeccc----ccCHHHHHHHHHHHHHhc--cCCCeeeee-------eEEeeCC-
Q 006886 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREV----AATKREFEQQMEVVGTIG--KHSNVVPVR-------AYYYSKD- 403 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~----~~~~~~~~~e~~~l~~l~--~h~niv~l~-------~~~~~~~- 403 (627)
.+.||+|+||.||+|+. .+|+.||||++... ....+.+.+|++++..+. +||||++++ +++...+
T Consensus 78 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 157 (377)
T 3byv_A 78 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 157 (377)
T ss_dssp EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTS
T ss_pred cceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCC
Confidence 47899999999999996 46899999998743 223567889995555443 899999998 6655443
Q ss_pred ----------------ceEEEEecCCCCCHHHHhhhcCC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCC
Q 006886 404 ----------------EKLVVYSYMPAGSLFMLLHRNRS--DGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIK 465 (627)
Q Consensus 404 ----------------~~~lv~e~~~~g~L~~~l~~~~~--~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk 465 (627)
..++||||+ +|+|.+++..... .....+++..++.++.|++.||+|||+++ |+|||||
T Consensus 158 ~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDik 233 (377)
T 3byv_A 158 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYLR 233 (377)
T ss_dssp CSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---EECSCCC
T ss_pred ccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCC
Confidence 278999999 6899999986421 11234557888999999999999999998 9999999
Q ss_pred CCCeEecCCCCeEEeecccccccCCC-CCCCCCccccCccccCCC-----------CCCCcchhHHHHHHHHHHHhCCCC
Q 006886 466 SSNVLLTQDLNGCISDVGLAHLINFP-TTATRTIGYRAPEVTETR-----------KASQKSDVYSFGVLLLEMLTGKAP 533 (627)
Q Consensus 466 ~~NILl~~~~~~ki~DfG~a~~~~~~-~~~~~t~~y~aPE~~~~~-----------~~~~~~Dv~S~Gvvl~el~tg~~p 533 (627)
|+|||++.++.+||+|||+++..... ....| +.|+|||++.+. .++.++|||||||++|||++|+.|
T Consensus 234 p~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~P 312 (377)
T 3byv_A 234 PVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLP 312 (377)
T ss_dssp GGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCC
T ss_pred HHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCC
Confidence 99999999999999999999875443 23446 899999999877 899999999999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006886 534 LQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~ 602 (627)
|.......... .+. ......+ .++.+++.+||..||++|||+.|+++
T Consensus 313 f~~~~~~~~~~---------------~~~----~~~~~~~---~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 313 ITKDAALGGSE---------------WIF----RSCKNIP---QPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp C------CCSG---------------GGG----SSCCCCC---HHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred Ccccccccchh---------------hhh----hhccCCC---HHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 97543322111 000 0111222 34667888999999999999999987
No 188
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.7e-37 Score=335.29 Aligned_cols=181 Identities=27% Similarity=0.431 Sum_probs=147.0
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCCeeeeeeEEeeC-----CceEEEE
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSK-----DEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-----~~~~lv~ 409 (627)
.+.||+|+||.||+|+.+ +++.||||++..... ..+.+.+|++++..+ +||||+++++++... ...++||
T Consensus 58 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 136 (458)
T 3rp9_A 58 RHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRL-NHDHVVKVLDIVIPKDVEKFDELYVVL 136 (458)
T ss_dssp CCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCTTTCCCEEEEE
T ss_pred eeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhC-CCCCCCceEEEEecCCcccCceEEEEE
Confidence 478999999999999965 689999999865432 346788999999999 999999999998543 5689999
Q ss_pred ecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006886 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||+ +|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 137 e~~-~~~L~~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 207 (458)
T 3rp9_A 137 EIA-DSDFKKLFRTP-----VYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207 (458)
T ss_dssp CCC-SEEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred ecc-ccchhhhcccC-----CCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccchhcc
Confidence 998 57999998753 35899999999999999999999998 9999999999999999999999999998764
Q ss_pred CC-------------------------------CCCCCCccccCcccc-CCCCCCCcchhHHHHHHHHHHHh
Q 006886 490 FP-------------------------------TTATRTIGYRAPEVT-ETRKASQKSDVYSFGVLLLEMLT 529 (627)
Q Consensus 490 ~~-------------------------------~~~~~t~~y~aPE~~-~~~~~~~~~Dv~S~Gvvl~el~t 529 (627)
.. ....||+.|+|||++ ....++.++|||||||++|||++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt 279 (458)
T 3rp9_A 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279 (458)
T ss_dssp SCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred CccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence 21 123468899999986 56679999999999999999999
No 189
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=327.20 Aligned_cols=253 Identities=18% Similarity=0.306 Sum_probs=188.2
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccccCH--HHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATK--REFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~--~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|+.. +++.||+|++....... ..+.+|++++..+ +||||+++++++...+..++||||++ |
T Consensus 7 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 84 (324)
T 3mtl_A 7 LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL-KHANIVTLHDIIHTEKSLTLVFEYLD-K 84 (324)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCC-CCTTBCCEEEEEECSSCEEEEEECCS-E
T ss_pred EEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhc-CCCCCCeeeeEEeeCCEEEEEecccc-c
Confidence 478999999999999976 68999999986543221 2355789999999 89999999999999999999999997 5
Q ss_pred CHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----
Q 006886 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491 (627)
Q Consensus 416 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~---- 491 (627)
+|.+++... +..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 85 ~l~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 157 (324)
T 3mtl_A 85 DLKQYLDDC----GNIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY 157 (324)
T ss_dssp EHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred CHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccCCcccc
Confidence 999998764 246899999999999999999999998 999999999999999999999999999866432
Q ss_pred CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcc---cccccc-hhh
Q 006886 492 TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEW---TAEVFD-VEL 566 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d-~~l 566 (627)
....+|+.|+|||++.+ ..++.++||||||+++|||++|+.||...... .....+........ ...... ...
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~ 234 (324)
T 3mtl_A 158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE---EQLHFIFRILGTPTEETWPGILSNEEF 234 (324)
T ss_dssp -----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHHCCCCTTTSTTGGGCHHH
T ss_pred ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHhCCCChHhchhhhcchhh
Confidence 23357899999999876 56899999999999999999999999764321 11111111111100 000000 000
Q ss_pred hc-------CCC----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 567 LK-------YQD----VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 567 ~~-------~~~----~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
.. ... .+....++.+++.+|++.||++|||++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 235 KTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp HHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00 000 00112356678889999999999999999883
No 190
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.3e-37 Score=331.80 Aligned_cols=242 Identities=21% Similarity=0.341 Sum_probs=184.8
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc---------CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEE
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---------TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv 408 (627)
.+.||+|+||.||+|..+ +++.||||++..... ....+.+|++++.++ +||||+++++++. .+..++|
T Consensus 140 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~-~~~~~lv 217 (419)
T 3i6u_A 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFFD-AEDYYIV 217 (419)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHC-CCTTBCCCCEEEE-SSEEEEE
T ss_pred EeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhC-CCCCEeeEEEEEe-cCceEEE
Confidence 478999999999999965 578999999865321 122478999999999 9999999999975 4567899
Q ss_pred EecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC---CCeEEeecccc
Q 006886 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD---LNGCISDVGLA 485 (627)
Q Consensus 409 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~---~~~ki~DfG~a 485 (627)
|||+++|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.+ +.+||+|||++
T Consensus 218 ~e~~~~g~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kl~DFG~a 289 (419)
T 3i6u_A 218 LELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHS 289 (419)
T ss_dssp EECCTTCBGGGGTSSS-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEEECCSSTT
T ss_pred EEcCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEEEeecccc
Confidence 9999999999988653 35899999999999999999999998 9999999999999754 45999999999
Q ss_pred cccCCC---CCCCCCccccCccccCC---CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccc
Q 006886 486 HLINFP---TTATRTIGYRAPEVTET---RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTA 559 (627)
Q Consensus 486 ~~~~~~---~~~~~t~~y~aPE~~~~---~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 559 (627)
+..... ....||+.|+|||++.+ ..++.++||||||+++|||++|+.||...... ..+...+ ......
T Consensus 290 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~--~~~~~~i----~~~~~~ 363 (419)
T 3i6u_A 290 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ--VSLKDQI----TSGKYN 363 (419)
T ss_dssp TSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS--CCHHHHH----HTTCCC
T ss_pred eecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch--HHHHHHH----hcCCCC
Confidence 877543 24458999999999853 67788999999999999999999999754322 1221111 111100
Q ss_pred cccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 560 EVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 560 ~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
+.+.. . ......+.+++.+||..||++|||+.|++++
T Consensus 364 --~~~~~--~---~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 364 --FIPEV--W---AEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp --CCHHH--H---TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred --CCchh--h---cccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 00000 0 0112356778889999999999999999874
No 191
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=7.7e-37 Score=311.72 Aligned_cols=241 Identities=22% Similarity=0.347 Sum_probs=198.3
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|... +++.||+|++.... ...+.+.+|+.++..+ +||||+++++++...+..++||||++++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 105 (303)
T 3a7i_A 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKDTKLWIIMEYLGGG 105 (303)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred hhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCCeEEEEEEeCCCC
Confidence 478999999999999864 68899999986542 3467899999999999 9999999999999999999999999999
Q ss_pred CHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----
Q 006886 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP---- 491 (627)
Q Consensus 416 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~---- 491 (627)
+|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 106 ~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 176 (303)
T 3a7i_A 106 SALDLLEP------GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR 176 (303)
T ss_dssp EHHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCB
T ss_pred cHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCcccccc
Confidence 99999864 35899999999999999999999998 999999999999999999999999999776432
Q ss_pred CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006886 492 TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
....+++.|+|||++.+..++.++||||||+++|||++|+.||..... ...... ........ +. ..
T Consensus 177 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~-~~~~~~~~-~~------~~ 242 (303)
T 3a7i_A 177 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP------MKVLFL-IPKNNPPT-LE------GN 242 (303)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHH-HHHSCCCC-CC------SS
T ss_pred CccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH------HHHHHH-hhcCCCCC-Cc------cc
Confidence 234578899999999999999999999999999999999999975321 111111 11111110 00 11
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHh
Q 006886 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQ 606 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~ 606 (627)
....+.+++.+||+.+|++|||+.|++++..-
T Consensus 243 ---~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~ 274 (303)
T 3a7i_A 243 ---YSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 274 (303)
T ss_dssp ---CCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHH
T ss_pred ---cCHHHHHHHHHHcCCChhhCcCHHHHhhChhh
Confidence 12346778889999999999999999986543
No 192
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=9.5e-38 Score=325.41 Aligned_cols=252 Identities=22% Similarity=0.319 Sum_probs=191.4
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeC--------CceE
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSK--------DEKL 406 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~--------~~~~ 406 (627)
.+.||+|+||.||+|+.. +|+.||||++.... .....+.+|++++..+ +||||+++++++... +..+
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~~~ 100 (351)
T 3mi9_A 22 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEICRTKASPYNRCKGSIY 100 (351)
T ss_dssp EEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHC-CCTTBCCEEEEEEEC--------CEEE
T ss_pred EEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhc-cCCCcccHhheeeccccccccCCceEE
Confidence 478999999999999974 78999999986442 2345788999999999 899999999999873 4578
Q ss_pred EEEecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccc
Q 006886 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH 486 (627)
Q Consensus 407 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~ 486 (627)
+||||+++ +|...+.... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 101 lv~e~~~~-~l~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 172 (351)
T 3mi9_A 101 LVFDFCEH-DLAGLLSNVL----VKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLAR 172 (351)
T ss_dssp EEEECCSE-EHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEeccCC-CHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence 99999975 7777776432 35899999999999999999999998 9999999999999999999999999997
Q ss_pred ccCCC--------CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcc
Q 006886 487 LINFP--------TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEW 557 (627)
Q Consensus 487 ~~~~~--------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 557 (627)
..... ....+|+.|+|||++.+ ..++.++||||||+++|||++|+.||......+ ....+.......
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~i~~~~~~~- 248 (351)
T 3mi9_A 173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH---QLALISQLCGSI- 248 (351)
T ss_dssp ECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCC-
T ss_pred cccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCCC-
Confidence 65421 23357899999999876 458999999999999999999999998643211 111111111100
Q ss_pred ccccc----chhh--------hcCCChHHH------HHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 558 TAEVF----DVEL--------LKYQDVEEE------MVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 558 ~~~~~----d~~l--------~~~~~~~~~------~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
..+.. .... .......+. ...+.+++.+||+.||++|||++|++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 249 TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp CTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 00000 0000 001111121 1346789999999999999999999874
No 193
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.5e-37 Score=321.28 Aligned_cols=251 Identities=21% Similarity=0.338 Sum_probs=189.0
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCC------ceEEE
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD------EKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~------~~~lv 408 (627)
.+.||+|+||.||+|... +|+.||||++..... ..+.+.+|++++..+ +||||+++++++.... ..++|
T Consensus 30 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~~~~~~~~lv 108 (367)
T 1cm8_A 30 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-RHENVIGLLDVFTPDETLDDFTDFYLV 108 (367)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-CBTTBCCCSEEECSCSSTTTCCCCEEE
T ss_pred eEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-CCcCCCCceeeEecCCccccCceEEEE
Confidence 478999999999999974 689999999865432 245688999999999 8999999999997653 45999
Q ss_pred EecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006886 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 409 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~ 488 (627)
|||+ +++|.+++... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 109 ~e~~-~~~L~~~~~~~------~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 178 (367)
T 1cm8_A 109 MPFM-GTDLGKLMKHE------KLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQA 178 (367)
T ss_dssp EECC-SEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EecC-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence 9999 88999999753 4899999999999999999999998 999999999999999999999999999876
Q ss_pred CCC-CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhc-cc-c----c
Q 006886 489 NFP-TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREE-WT-A----E 560 (627)
Q Consensus 489 ~~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~-~----~ 560 (627)
... ....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+.. ..+..+.... .. . .
T Consensus 179 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~l~~i~~~~g~~~~~~~~~ 252 (367)
T 1cm8_A 179 DSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL------DQLKEIMKVTGTPPAEFVQR 252 (367)
T ss_dssp CSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHHHCCCCHHHHHT
T ss_pred ccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHhcCCCCHHHHHH
Confidence 543 34568999999999876 68999999999999999999999999764321 1111111100 00 0 0
Q ss_pred c---------------cchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhc
Q 006886 561 V---------------FDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM--IEQIQ 608 (627)
Q Consensus 561 ~---------------~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~--L~~~~ 608 (627)
+ ....+.. ........+.+++.+|+..||++|||++|++++ ++.+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~ 315 (367)
T 1cm8_A 253 LQSDEAKNYMKGLPELEKKDFAS--ILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 315 (367)
T ss_dssp CSCHHHHHHHHHSCCCCCCCGGG--TCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred hhhHHHHHHHHhCCCCCCCCHHH--HCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence 0 0000000 001122456778889999999999999999884 44443
No 194
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=8.5e-38 Score=323.58 Aligned_cols=238 Identities=21% Similarity=0.354 Sum_probs=196.0
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||++... +++.||+|++.... ...+.+.+|+.++..+ +||||+++++++.+.+..++||||++
T Consensus 46 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 124 (335)
T 2owb_A 46 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCR 124 (335)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCeEEEEEecCC
Confidence 478999999999999976 47899999986542 2346788899999999 99999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+++|.+++... ..+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 125 ~~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 196 (335)
T 2owb_A 125 RRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 196 (335)
T ss_dssp TCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred CCCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceecccCcc
Confidence 99999998764 35899999999999999999999998 999999999999999999999999999876422
Q ss_pred --CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006886 492 --TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
....++..|+|||++.+..++.++||||||+++|||++|+.||.... .......+...... + .
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~~~~~---~------~ 261 (335)
T 2owb_A 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC------LKETYLRIKKNEYS---I------P 261 (335)
T ss_dssp CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHTCCC---C------C
T ss_pred cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC------HHHHHHHHhcCCCC---C------C
Confidence 23457899999999988889999999999999999999999997532 11111111111100 0 0
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
... ...+.+++.+||+.||++|||+.|++++
T Consensus 262 ~~~---~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 262 KHI---NPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp TTS---CHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccC---CHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 111 2345678889999999999999999984
No 195
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2e-37 Score=320.21 Aligned_cols=254 Identities=24% Similarity=0.346 Sum_probs=191.5
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccccC---HHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAAT---KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||+|+.. +++.||||++...... .+.+.+|++++..+ +||||+++++++...+..++||||+++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 108 (331)
T 4aaa_A 30 LGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL-RHENLVNLLEVCKKKKRWYLVFEFVDH 108 (331)
T ss_dssp EEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhC-CCCCEeeEEEEeecCCEEEEEEecCCc
Confidence 478999999999999976 5899999998654332 45678899999999 899999999999999999999999999
Q ss_pred CCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006886 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
++|..++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 109 ~~l~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 180 (331)
T 4aaa_A 109 TILDDLELFP-----NGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV 180 (331)
T ss_dssp EHHHHHHHST-----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred chHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeecCCccc
Confidence 9998886643 35899999999999999999999998 999999999999999999999999999775432
Q ss_pred -CCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHH----------HHhhh-ccc
Q 006886 492 -TTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVR----------SVVRE-EWT 558 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~----------~~~~~-~~~ 558 (627)
....+++.|+|||++.+. .++.++||||||+++|||++|+.||......+ .+..... ..... ...
T Consensus 181 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
T 4aaa_A 181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID--QLYHIMMCLGNLIPRHQELFNKNPVF 258 (331)
T ss_dssp ---CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH--HHHHHHHHhCCCChhhhhHhhhcccc
Confidence 334578999999998775 78999999999999999999999997543211 0000000 00000 000
Q ss_pred ccccchhhhcCCCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 559 AEVFDVELLKYQDV----EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 559 ~~~~d~~l~~~~~~----~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
.....+........ +.....+.+++.+||+.||++|||+.|++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp TTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000000000000 1123457788889999999999999999874
No 196
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.2e-37 Score=317.33 Aligned_cols=241 Identities=24% Similarity=0.358 Sum_probs=193.2
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCCH
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 417 (627)
.+.||+|+||.||+|..+ +|+.||+|.+.... ..+.+.+|++++..+ +||||+++++++...+..++||||+++|+|
T Consensus 34 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 111 (314)
T 3com_A 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQC-DSPHVVKYYGSYFKNTDLWIVMEYCGAGSV 111 (314)
T ss_dssp EEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred heeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhC-CCCCCccEEEEEEeCCEEEEEeecCCCCCH
Confidence 478999999999999976 58999999987543 456789999999999 999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC----CC
Q 006886 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP----TT 493 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~----~~ 493 (627)
.+++... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++...... ..
T Consensus 112 ~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 184 (314)
T 3com_A 112 SDIIRLR----NKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 184 (314)
T ss_dssp HHHHHHH----TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCC
T ss_pred HHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCc
Confidence 9999743 235899999999999999999999998 999999999999999999999999999766432 23
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChH
Q 006886 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVE 573 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 573 (627)
..+++.|+|||++.+..++.++||||||+++|||++|+.||..... ........ ........ ...
T Consensus 185 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~-~~~~~~~~--------~~~ 249 (314)
T 3com_A 185 VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP------MRAIFMIP-TNPPPTFR--------KPE 249 (314)
T ss_dssp CCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHH-HSCCCCCS--------SGG
T ss_pred cCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHh-cCCCcccC--------Ccc
Confidence 4578899999999998999999999999999999999999975321 11111111 11111100 011
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 574 EEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 574 ~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
.....+.+++.+||..||.+|||+.+++++
T Consensus 250 ~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 250 LWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp GSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 112356778889999999999999999873
No 197
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=4e-37 Score=317.15 Aligned_cols=243 Identities=24% Similarity=0.374 Sum_probs=191.6
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEee------CCceEEEEec
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS------KDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~------~~~~~lv~e~ 411 (627)
.+.||+|+||.||+|+.. +++.||||++.......+.+.+|++++.++.+||||+++++++.. .+..++||||
T Consensus 29 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~ 108 (326)
T 2x7f_A 29 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEF 108 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEEC
T ss_pred EEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEc
Confidence 478999999999999974 689999999976666678899999999999889999999999987 4578999999
Q ss_pred CCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC
Q 006886 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 412 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~ 491 (627)
+++|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 109 ~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 182 (326)
T 2x7f_A 109 CGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 182 (326)
T ss_dssp CTTEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCTTTC-----
T ss_pred CCCCcHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCCEEEeeCcCceecCcC
Confidence 99999999998643 246899999999999999999999998 999999999999999999999999999876432
Q ss_pred ----CCCCCCccccCccccC-----CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006886 492 ----TTATRTIGYRAPEVTE-----TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 492 ----~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
....+++.|+|||++. +..++.++||||||+++|||++|+.||..... ........... .....
T Consensus 183 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~-~~~~~ 255 (326)
T 2x7f_A 183 VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP------MRALFLIPRNP-APRLK 255 (326)
T ss_dssp --------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHSC-CCCCS
T ss_pred ccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcH------HHHHHHhhcCc-cccCC
Confidence 2345789999999986 56789999999999999999999999965321 11111111111 11100
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
.... ...+.+++.+||..||++||++.+++++
T Consensus 256 ------~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 256 ------SKKW---SKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp ------CSCS---CHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ------cccc---CHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 1111 2356678889999999999999999883
No 198
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=3.9e-37 Score=313.62 Aligned_cols=241 Identities=20% Similarity=0.335 Sum_probs=191.2
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccc-ccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV-AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~-~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 416 (627)
.+.||+|+||.||+|... +++.||+|++... ....+.+.+|++++..+ +||||+++++++...+..++||||+++++
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 102 (302)
T 2j7t_A 24 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATC-DHPYIVKLLGAYYHDGKLWIMIEFCPGGA 102 (302)
T ss_dssp EEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHC-CCTTBCCEEEEEECC-CEEEEEECCTTEE
T ss_pred cceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcC-CCCCEeeeeeeeeeCCeEEEEEEeCCCCc
Confidence 478999999999999976 5889999998654 34567899999999999 99999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc----CCCC
Q 006886 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI----NFPT 492 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~----~~~~ 492 (627)
|.+++.... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++... ....
T Consensus 103 l~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 175 (302)
T 2j7t_A 103 VDAIMLELD----RGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD 175 (302)
T ss_dssp HHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC--
T ss_pred HHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCccccccccccc
Confidence 999987642 35899999999999999999999998 999999999999999999999999987543 1233
Q ss_pred CCCCCccccCcccc-----CCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006886 493 TATRTIGYRAPEVT-----ETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 493 ~~~~t~~y~aPE~~-----~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
...+++.|+|||++ .+..++.++||||||+++|||++|+.||.... .............. ....
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~~-~~~~---- 244 (302)
T 2j7t_A 176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN------PMRVLLKIAKSDPP-TLLT---- 244 (302)
T ss_dssp ---CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHSCCC-CCSS----
T ss_pred cccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC------HHHHHHHHhccCCc-ccCC----
Confidence 45688999999998 46778999999999999999999999997532 11222222211111 1000
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006886 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~ 602 (627)
.......+.+++.+||+.+|++|||+.|+++
T Consensus 245 ----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 245 ----PSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp ----GGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred ----ccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 1112235677888999999999999999976
No 199
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=7.7e-37 Score=307.20 Aligned_cols=238 Identities=19% Similarity=0.346 Sum_probs=189.5
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|..+ +++.||||++.... ...+.+.+|++++..+ +||||+++++++...+..++||||++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 94 (276)
T 2h6d_A 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF-RHPHIIKLYQVISTPTDFFMVMEYVS 94 (276)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcC-CCCCEeEEEEEEecCCeEEEEEeccC
Confidence 478999999999999976 68999999986532 3456789999999999 89999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+++|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 95 ~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 166 (276)
T 2h6d_A 95 GGELFDYICKHG-----RVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 166 (276)
T ss_dssp SCBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---
T ss_pred CCcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccccccCCCcc
Confidence 999999997652 4899999999999999999999998 999999999999999999999999999876543
Q ss_pred -CCCCCCccccCccccCCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006886 492 -TTATRTIGYRAPEVTETRKA-SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
....+++.|+|||++.+..+ +.++||||||+++|||++|+.||.... .......+. .... .+ .
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~-~~~~--~~------~ 231 (276)
T 2h6d_A 167 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH------VPTLFKKIR-GGVF--YI------P 231 (276)
T ss_dssp ----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHH-HCCC--CC------C
T ss_pred eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc------HHHHHHHhh-cCcc--cC------c
Confidence 23457889999999987765 689999999999999999999997532 112121111 1100 00 0
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
. .....+.+++.+|++.||++|||+.|++++
T Consensus 232 ~---~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 232 E---YLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp T---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred h---hcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 1 112346678889999999999999999985
No 200
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=2e-37 Score=314.63 Aligned_cols=239 Identities=21% Similarity=0.344 Sum_probs=196.3
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||++... +++.||+|++.... ...+.+.+|++++..+ +||||+++++++.+.+..++||||++
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 98 (294)
T 2rku_A 20 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCR 98 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhC-CCCCEeeeeeeeccCCEEEEEEecCC
Confidence 478999999999999976 57899999986542 2345688899999999 99999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+++|.+++... ..+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 99 ~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 170 (294)
T 2rku_A 99 RRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170 (294)
T ss_dssp TCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence 99999998764 35899999999999999999999998 999999999999999999999999999876432
Q ss_pred --CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006886 492 --TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
....+++.|+|||++.+..++.++||||||+++|||++|+.||.... .............. ..
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~~~~~---------~~ 235 (294)
T 2rku_A 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC------LKETYLRIKKNEYS---------IP 235 (294)
T ss_dssp CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHTTCCC---------CC
T ss_pred ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHhhccCC---------Cc
Confidence 23457889999999998889999999999999999999999997532 11111111111100 00
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006886 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMI 604 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L 604 (627)
... ...+.+++.+||+.||++|||+.|++++-
T Consensus 236 ~~~---~~~~~~li~~~l~~~p~~Rps~~~ll~~~ 267 (294)
T 2rku_A 236 KHI---NPVAASLIQKMLQTDPTARPTINELLNDE 267 (294)
T ss_dssp TTS---CHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred ccc---CHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 111 23466788899999999999999998853
No 201
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=316.05 Aligned_cols=243 Identities=24% Similarity=0.331 Sum_probs=192.2
Q ss_pred cccCcCCceeEEEEEec-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCCH
Q 006886 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 417 (627)
..||+|+||.||+|... +++.||||.+.... ...+.+.+|+.++..+ +||||+++++++...+..++||||+++++|
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 106 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHL-KHKNIVQYLGSFSENGFIKIFMEQVPGGSL 106 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCSEEEH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhC-CCCCEeeEeeEEEeCCcEEEEEEeCCCCCH
Confidence 57999999999999964 68899999987643 3456789999999999 999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC-CCCeEEeecccccccCC----CC
Q 006886 418 FMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ-DLNGCISDVGLAHLINF----PT 492 (627)
Q Consensus 418 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~-~~~~ki~DfG~a~~~~~----~~ 492 (627)
.+++..... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++. ++.+||+|||+++.... ..
T Consensus 107 ~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~ 181 (295)
T 2clq_A 107 SALLRSKWG--PLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE 181 (295)
T ss_dssp HHHHHHTTC--CCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----C
T ss_pred HHHHHhhcc--CCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCCCCCccc
Confidence 999986432 345778999999999999999999998 999999999999988 89999999999987643 23
Q ss_pred CCCCCccccCccccCCC--CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCC
Q 006886 493 TATRTIGYRAPEVTETR--KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQ 570 (627)
Q Consensus 493 ~~~~t~~y~aPE~~~~~--~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 570 (627)
...+++.|+|||++.+. .++.++||||||+++|||++|+.||...... ............... +
T Consensus 182 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~-----~---- 247 (295)
T 2clq_A 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP-----QAAMFKVGMFKVHPE-----I---- 247 (295)
T ss_dssp CCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSH-----HHHHHHHHHHCCCCC-----C----
T ss_pred ccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCch-----hHHHHhhcccccccc-----c----
Confidence 44578999999998654 3789999999999999999999999643211 110111000000000 0
Q ss_pred ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 571 DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 571 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
......++.+++.+||..||++||++.|++++
T Consensus 248 -~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 248 -PESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp -CTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred -cccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 01122356678889999999999999999763
No 202
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.9e-37 Score=324.32 Aligned_cols=258 Identities=19% Similarity=0.295 Sum_probs=195.7
Q ss_pred hcccCcCCceeEEEEEe-cCCcEEEEEEecccccCHHHHHHHHHHHHHhc----------cCCCeeeeeeEEeeCC----
Q 006886 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVAATKREFEQQMEVVGTIG----------KHSNVVPVRAYYYSKD---- 403 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~----------~h~niv~l~~~~~~~~---- 403 (627)
.+.||+|+||.||+|+. .+++.||||++.......+.+.+|++++.++. .|+||+++++++...+
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 103 (373)
T 1q8y_A 24 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGV 103 (373)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEE
T ss_pred EEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCc
Confidence 47899999999999996 46899999999765555677889999988874 2899999999998654
Q ss_pred ceEEEEecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCCeEec------CCCC
Q 006886 404 EKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE-GGAKFTHGNIKSSNVLLT------QDLN 476 (627)
Q Consensus 404 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dlk~~NILl~------~~~~ 476 (627)
..++||||+ +++|.+++.... ...+++..+..++.|++.||.|||++ + |+||||||+|||++ .++.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~~~~~~~~ 176 (373)
T 1q8y_A 104 HVVMVFEVL-GENLLALIKKYE---HRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPENLIQ 176 (373)
T ss_dssp EEEEEECCC-CEEHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETTTTEEE
T ss_pred eEEEEEecC-CCCHHHHHHHhh---ccCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccCCCcCcce
Confidence 678999999 899999998643 23589999999999999999999998 8 99999999999995 3457
Q ss_pred eEEeecccccccCCC-CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhh
Q 006886 477 GCISDVGLAHLINFP-TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVRE 555 (627)
Q Consensus 477 ~ki~DfG~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 555 (627)
+||+|||+++..... ....+|+.|+|||++.+..++.++||||||+++|||++|+.||.................+...
T Consensus 177 ~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 256 (373)
T 1q8y_A 177 IKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIEL 256 (373)
T ss_dssp EEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHH
T ss_pred EEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHh
Confidence 999999999876543 3456899999999999989999999999999999999999999865432222111111111110
Q ss_pred --cccc----------ccc------------------chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 556 --EWTA----------EVF------------------DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 556 --~~~~----------~~~------------------d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
.... ..+ +..............++.+++.+||+.||++|||+.|++++
T Consensus 257 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 334 (373)
T 1q8y_A 257 LGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 334 (373)
T ss_dssp HCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred cCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhC
Confidence 0000 000 00001112234566788899999999999999999999884
No 203
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2.6e-37 Score=325.91 Aligned_cols=194 Identities=22% Similarity=0.331 Sum_probs=167.1
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCC-----eeeeeeEEeeCCceEEEEecC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSN-----VVPVRAYYYSKDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~n-----iv~l~~~~~~~~~~~lv~e~~ 412 (627)
.+.||+|+||.||+|... +++.||||+++.......++..|++++..+..|++ ++++.+++...+..++||||+
T Consensus 59 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~ 138 (382)
T 2vx3_A 59 DSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML 138 (382)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECC
T ss_pred EEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecC
Confidence 478999999999999965 67899999997654455678889999988866764 899999999999999999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEec--CCCCeEEeecccccccCC
Q 006886 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLT--QDLNGCISDVGLAHLINF 490 (627)
Q Consensus 413 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~--~~~~~ki~DfG~a~~~~~ 490 (627)
+ |+|.+++..... ..+++..+..++.|++.||.|||++. ..|+||||||+|||++ .++.+||+|||+++....
T Consensus 139 ~-~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~~-~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~ 213 (382)
T 2vx3_A 139 S-YNLYDLLRNTNF---RGVSLNLTRKFAQQMCTALLFLATPE-LSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 213 (382)
T ss_dssp C-CBHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHTSTT-TCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred C-CCHHHHHhhcCc---CCCCHHHHHHHHHHHHHHHHHhccCC-CCEEcCCCCcccEEEecCCCCcEEEEeccCceeccc
Confidence 6 599999986532 35899999999999999999999531 2399999999999995 478899999999987754
Q ss_pred C-CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 006886 491 P-TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHS 537 (627)
Q Consensus 491 ~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~ 537 (627)
. ....+|+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 214 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 214 RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 3 3456899999999999999999999999999999999999999864
No 204
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2.6e-37 Score=337.74 Aligned_cols=241 Identities=21% Similarity=0.354 Sum_probs=193.3
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc--------------cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--------------ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD 403 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~--------------~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~ 403 (627)
.+.||+|+||+||+|..+ +++.||+|++.... ...+.+.+|++++..+ +||||+++++++.+..
T Consensus 41 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~ 119 (504)
T 3q5i_A 41 VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL-DHPNIIKLFDVFEDKK 119 (504)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTC-CCTTBCCEEEEEECSS
T ss_pred EeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCC
Confidence 478999999999999976 57899999986542 2356789999999999 8999999999999999
Q ss_pred ceEEEEecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC---CeEEe
Q 006886 404 EKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL---NGCIS 480 (627)
Q Consensus 404 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~---~~ki~ 480 (627)
..++||||+++|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++ .+||+
T Consensus 120 ~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~ 191 (504)
T 3q5i_A 120 YFYLVTEFYEGGELFEQIINR-----HKFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIV 191 (504)
T ss_dssp EEEEEEECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCSSEEEC
T ss_pred EEEEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCccEEEE
Confidence 999999999999999999764 34899999999999999999999998 99999999999999876 69999
Q ss_pred ecccccccCCC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcc
Q 006886 481 DVGLAHLINFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEW 557 (627)
Q Consensus 481 DfG~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 557 (627)
|||+++..... ....||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... ......+.....
T Consensus 192 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~~~~ 264 (504)
T 3q5i_A 192 DFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQND------QDIIKKVEKGKY 264 (504)
T ss_dssp CCTTCEECCTTSCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCC
T ss_pred ECCCCEEcCCCCccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHcCCC
Confidence 99999876543 34468999999999874 689999999999999999999999975421 222222222111
Q ss_pred cccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 558 TAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 558 ~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
. ++.. .+... ..++.+++.+|+..||.+|||+.|++++
T Consensus 265 ~---~~~~--~~~~~---s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 265 Y---FDFN--DWKNI---SDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp C---CCHH--HHTTS---CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred C---CCcc--ccCCC---CHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1 1100 01111 2356678889999999999999999874
No 205
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2.1e-37 Score=337.13 Aligned_cols=241 Identities=24% Similarity=0.363 Sum_probs=196.8
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccc----ccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREV----AATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~----~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+++.+ +++.||||++... ....+.+.+|++++.++ +||||+++++++...+..++|+||++
T Consensus 31 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~ 109 (484)
T 3nyv_A 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL-DHPNIMKLYEFFEDKGYFYLVGEVYT 109 (484)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEEEEEecCC
Confidence 478999999999999976 7899999998643 23567899999999999 99999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe---cCCCCeEEeecccccccCC
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL---TQDLNGCISDVGLAHLINF 490 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl---~~~~~~ki~DfG~a~~~~~ 490 (627)
+|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++....
T Consensus 110 ~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 110 GGELFDEIISR-----KRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp SCBHHHHHHTC-----SCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 99999999754 35899999999999999999999998 9999999999999 5678999999999987654
Q ss_pred CC---CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006886 491 PT---TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 491 ~~---~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
.. ...||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... ......+........ ..
T Consensus 182 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~~~~~~~-----~~ 249 (484)
T 3nyv_A 182 SKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE------YDILKKVEKGKYTFE-----LP 249 (484)
T ss_dssp CCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCCCC-----SG
T ss_pred ccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHHcCCCCCC-----Cc
Confidence 43 2358999999999876 689999999999999999999999975421 122222222111110 00
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
... .....+.+++.+||..+|.+|||+.|++++
T Consensus 250 ~~~---~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 250 QWK---KVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp GGG---GSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ccc---cCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 111 122346678889999999999999999974
No 206
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.5e-37 Score=312.86 Aligned_cols=252 Identities=21% Similarity=0.290 Sum_probs=196.0
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCCeeeeeeEEee--CCceEEEEecC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYS--KDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~--~~~~~lv~e~~ 412 (627)
.+.||+|+||.||++..+ +++.||+|++..... ..+.+.+|++++.++ +||||+++++++.. ....++||||+
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e~~ 89 (279)
T 2w5a_A 11 LYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRTNTTLYIVMEYC 89 (279)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEEGGGTEEEEEEECC
T ss_pred ehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhc-CCCCCCeEEEEEecCCCceEEEEEeCC
Confidence 478999999999999975 689999999875432 345688999999999 89999999998854 56789999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCeeecCCCCCCeEecCCCCeEEeecccccccCC
Q 006886 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEG--GAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF 490 (627)
Q Consensus 413 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~--~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~ 490 (627)
++|+|.+++..... ....+++..++.++.|++.||.|||+.+ ..+|+||||||+||+++.++.+||+|||+++....
T Consensus 90 ~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~ 168 (279)
T 2w5a_A 90 EGGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH 168 (279)
T ss_dssp TTEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC--
T ss_pred CCCCHHHHHHhhcc-cCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeecc
Confidence 99999999976432 1345899999999999999999999986 23499999999999999999999999999987654
Q ss_pred CC----CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhh
Q 006886 491 PT----TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVEL 566 (627)
Q Consensus 491 ~~----~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 566 (627)
.. ...+++.|+|||++.+..++.++||||||+++|||++|+.||..... ......+. ...... +.
T Consensus 169 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~i~-~~~~~~-~~--- 237 (279)
T 2w5a_A 169 DTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ------KELAGKIR-EGKFRR-IP--- 237 (279)
T ss_dssp -CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHH-HTCCCC-CC---
T ss_pred ccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH------HHHHHHHh-hccccc-CC---
Confidence 32 23478899999999888999999999999999999999999975421 11111111 111111 00
Q ss_pred hcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcc
Q 006886 567 LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQ 609 (627)
Q Consensus 567 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~ 609 (627)
.....++.+++.+||+.+|++||++.|+++++.....
T Consensus 238 ------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~ 274 (279)
T 2w5a_A 238 ------YRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEH 274 (279)
T ss_dssp ------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGG
T ss_pred ------cccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhh
Confidence 1112356678889999999999999999987655443
No 207
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.4e-37 Score=321.12 Aligned_cols=248 Identities=20% Similarity=0.306 Sum_probs=185.3
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||+|+.. +++.||||+++.... ..+.+.+|++++..+ +||||+++++++...+..++||||++
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~- 116 (329)
T 3gbz_A 39 ITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKEL-QHRNIIELKSVIHHNHRLHLIFEYAE- 116 (329)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGC-CCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred EEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHc-CCCCcceEEEEEecCCEEEEEEecCC-
Confidence 478999999999999955 688999999865432 235678899999999 99999999999999999999999997
Q ss_pred CCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEec-----CCCCeEEeecccccccC
Q 006886 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLT-----QDLNGCISDVGLAHLIN 489 (627)
Q Consensus 415 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~-----~~~~~ki~DfG~a~~~~ 489 (627)
|+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+|||++ .++.+||+|||+++...
T Consensus 117 ~~L~~~~~~~~-----~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~ 188 (329)
T 3gbz_A 117 NDLKKYMDKNP-----DVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188 (329)
T ss_dssp EEHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred CCHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence 59999998653 4899999999999999999999998 99999999999994 45559999999998764
Q ss_pred CC----CCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhc-cccc-cc
Q 006886 490 FP----TTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREE-WTAE-VF 562 (627)
Q Consensus 490 ~~----~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~ 562 (627)
.. ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||..... ......+.... .... ..
T Consensus 189 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~~~~~~~~~~~~~~~ 262 (329)
T 3gbz_A 189 IPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE------IDQLFKIFEVLGLPDDTTW 262 (329)
T ss_dssp -----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHHHCCCCTTTS
T ss_pred CcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCH------HHHHHHHHHHhCCCchhhh
Confidence 32 234568999999998774 489999999999999999999999975421 11111111100 0000 00
Q ss_pred ---------chhhh--cCCChHH-----HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006886 563 ---------DVELL--KYQDVEE-----EMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 563 ---------d~~l~--~~~~~~~-----~~~~l~~l~~~Cl~~~p~~RPs~~ev~~ 602 (627)
..... ....... ...++.+++.+||+.||++|||+.|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 263 PGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 00000 0000111 1245678888999999999999999976
No 208
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=8.2e-37 Score=310.62 Aligned_cols=242 Identities=19% Similarity=0.335 Sum_probs=195.0
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc----------cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEE
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----------ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLV 407 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~----------~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~l 407 (627)
.+.||+|+||.||+|..+ +++.||||++.... ...+.+.+|++++.++.+||||+++++++...+..++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~l 101 (298)
T 1phk_A 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFL 101 (298)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred eeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEE
Confidence 478999999999999975 68899999986432 1235678899999999669999999999999999999
Q ss_pred EEecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccc
Q 006886 408 VYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHL 487 (627)
Q Consensus 408 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~ 487 (627)
||||+++|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++..
T Consensus 102 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 173 (298)
T 1phk_A 102 VFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQ 173 (298)
T ss_dssp EEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEecccchhh
Confidence 99999999999999864 35899999999999999999999998 99999999999999999999999999987
Q ss_pred cCCC---CCCCCCccccCccccC------CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccc
Q 006886 488 INFP---TTATRTIGYRAPEVTE------TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWT 558 (627)
Q Consensus 488 ~~~~---~~~~~t~~y~aPE~~~------~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (627)
.... ....+++.|+|||++. ...++.++||||||+++|||++|+.||..... ......+......
T Consensus 174 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~~~~~ 247 (298)
T 1phk_A 174 LDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ------MLMLRMIMSGNYQ 247 (298)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCC
T ss_pred cCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH------HHHHHHHhcCCcc
Confidence 6443 2345789999999874 45688999999999999999999999975321 1112222211111
Q ss_pred ccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006886 559 AEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 559 ~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~ 602 (627)
. .. .........+.+++.+||..||++|||+.|+++
T Consensus 248 ~--~~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 248 F--GS------PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp C--CT------TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred c--Cc------ccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 0 00 011122345678888999999999999999976
No 209
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.4e-37 Score=320.48 Aligned_cols=251 Identities=20% Similarity=0.289 Sum_probs=191.5
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccccC------HHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEec
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAAT------KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~------~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 411 (627)
.+.||+|+||.||+|... +|+.||||++...... .+.+.+|++++..+ +||||+++++++...+..++||||
T Consensus 15 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~ 93 (346)
T 1ua2_A 15 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIGLLDAFGHKSNISLVFDF 93 (346)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHC-CCTTBCCEEEEECCTTCCEEEEEC
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhC-CCCCCCeEEEEEeeCCceEEEEEc
Confidence 478999999999999975 5899999998653221 24678999999999 899999999999999999999999
Q ss_pred CCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC
Q 006886 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP 491 (627)
Q Consensus 412 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~ 491 (627)
+++ +|..++... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 94 ~~~-~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (346)
T 1ua2_A 94 MET-DLEVIIKDN----SLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165 (346)
T ss_dssp CSE-EHHHHHTTC----CSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred CCC-CHHHHHHhc----CcCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence 976 898888753 245888999999999999999999998 999999999999999999999999999876432
Q ss_pred ----CCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhc---ccccccc
Q 006886 492 ----TTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREE---WTAEVFD 563 (627)
Q Consensus 492 ----~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d 563 (627)
....+|+.|+|||++.+. .++.++||||||+++|||++|..||..... ......+.... ......+
T Consensus 166 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~------~~~~~~i~~~~~~~~~~~~~~ 239 (346)
T 1ua2_A 166 NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD------LDQLTRIFETLGTPTEEQWPD 239 (346)
T ss_dssp CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHHHCCCCTTTSSS
T ss_pred cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH------HHHHHHHHHHcCCCChhhhhh
Confidence 234578999999998654 589999999999999999999999875421 11111111110 0000000
Q ss_pred ----hhh---hcCCCh------HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006886 564 ----VEL---LKYQDV------EEEMVQMLQIALSCVAKVPDSRPKMDDVVRMI 604 (627)
Q Consensus 564 ----~~l---~~~~~~------~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L 604 (627)
+.. ...... .....++.+++.+|+..||++|||+.|++++-
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~ 293 (346)
T 1ua2_A 240 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 293 (346)
T ss_dssp TTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred hccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence 000 000000 11224677888899999999999999998754
No 210
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=3.3e-37 Score=336.06 Aligned_cols=241 Identities=20% Similarity=0.342 Sum_probs=191.5
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||+|+.+ ++..||+|++.... .....+.+|++++..+ +||||+++++++.+....++||||+++
T Consensus 42 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~ 120 (494)
T 3lij_A 42 VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLL-DHPNIMKLYDFFEDKRNYYLVMECYKG 120 (494)
T ss_dssp EEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence 578999999999999976 68899999987542 2356789999999999 999999999999999999999999999
Q ss_pred CCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC---CCeEEeecccccccCCC
Q 006886 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD---LNGCISDVGLAHLINFP 491 (627)
Q Consensus 415 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~---~~~ki~DfG~a~~~~~~ 491 (627)
|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.+ +.+||+|||+++.....
T Consensus 121 g~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~ 192 (494)
T 3lij_A 121 GELFDEIIHR-----MKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192 (494)
T ss_dssp CBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence 9999988764 35899999999999999999999998 9999999999999764 55999999999876543
Q ss_pred ---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006886 492 ---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 492 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
....||+.|+|||++. ..++.++||||+||++|+|++|+.||..... ......+........ .+ .
T Consensus 193 ~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~~~~~~~--~~---~ 260 (494)
T 3lij_A 193 KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD------QEILRKVEKGKYTFD--SP---E 260 (494)
T ss_dssp BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCCCC--SG---G
T ss_pred ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCCCCC--ch---h
Confidence 3446899999999986 4689999999999999999999999975421 222222222211100 01 1
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 569 YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
+...+ ..+.+++.+||..+|.+|||+.|++++
T Consensus 261 ~~~~s---~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 261 WKNVS---EGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp GTTSC---HHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred cccCC---HHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 11122 345677889999999999999999874
No 211
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=5.2e-37 Score=321.23 Aligned_cols=250 Identities=19% Similarity=0.273 Sum_probs=185.7
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEecccccC------------HHHHHHHHHHHHHhccCCCeeeeeeEEeeC----
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAAT------------KREFEQQMEVVGTIGKHSNVVPVRAYYYSK---- 402 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~------------~~~~~~e~~~l~~l~~h~niv~l~~~~~~~---- 402 (627)
.+.||+|+||.||+|...+|+.||||++...... .+.+.+|++++.++ +||||+++++++...
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 105 (362)
T 3pg1_A 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF-HHPNILGLRDIFVHFEEPA 105 (362)
T ss_dssp EEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEEEECCTTT
T ss_pred eEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhC-CCcCccceeeeEEeccCCC
Confidence 4789999999999999888999999998653221 26789999999999 899999999998543
Q ss_pred -CceEEEEecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEee
Q 006886 403 -DEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISD 481 (627)
Q Consensus 403 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~D 481 (627)
...++||||++ |+|.+++... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|
T Consensus 106 ~~~~~lv~e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~D 177 (362)
T 3pg1_A 106 MHKLYLVTELMR-TDLAQVIHDQ----RIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICD 177 (362)
T ss_dssp CCEEEEEEECCS-EEHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC
T ss_pred cceEEEEEccCC-CCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHEEEcCCCCEEEEe
Confidence 35789999997 6888888743 246899999999999999999999998 99999999999999999999999
Q ss_pred cccccccCCC---CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcc
Q 006886 482 VGLAHLINFP---TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEW 557 (627)
Q Consensus 482 fG~a~~~~~~---~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 557 (627)
||+++..... ....+|+.|+|||++.+ ..++.++||||||+++|||++|+.||...... .....+.....
T Consensus 178 fg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~------~~~~~i~~~~~ 251 (362)
T 3pg1_A 178 FNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY------NQLNKIVEVVG 251 (362)
T ss_dssp TTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHHHC
T ss_pred cCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHHcC
Confidence 9999765432 23457889999999876 67899999999999999999999999754311 11111111000
Q ss_pred ccc--------------ccchhhhc--CCCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 558 TAE--------------VFDVELLK--YQDV----EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 558 ~~~--------------~~d~~l~~--~~~~----~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
... .+...... .... +.....+.+++.+||+.||++|||+.|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 252 TPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp CCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 000 00000000 0000 1112356788899999999999999999874
No 212
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1e-37 Score=323.62 Aligned_cols=245 Identities=20% Similarity=0.313 Sum_probs=190.4
Q ss_pred hcccCcCCceeEEEEEe-cCCcEEEEEEecccccC--HHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCC
Q 006886 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVAAT--KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~--~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|+. .+|+.||||++...... ..++..|..++.+..+||||+++++++...+..++||||+++
T Consensus 56 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~- 134 (340)
T 3an0_A 56 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT- 134 (340)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE-
T ss_pred eeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC-
Confidence 47899999999999996 46899999999765332 345566666644444999999999999999999999999975
Q ss_pred CHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006886 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE-GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 416 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
+|.+++..... ....+++..++.++.|++.||.|||+. + |+||||||+|||++.++.+||+|||+++.....
T Consensus 135 ~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 210 (340)
T 3an0_A 135 SLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK 210 (340)
T ss_dssp EHHHHHHHHHH-TSCCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHHHH
T ss_pred cHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeCCCceeccccccc
Confidence 99988875311 134699999999999999999999987 7 999999999999999999999999999776432
Q ss_pred CCCCCCccccCccccC----CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006886 492 TTATRTIGYRAPEVTE----TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~----~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
....||+.|+|||++. ...++.++||||||+++|||++|+.||..... ....+......... ...
T Consensus 211 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~-----~~~~~~~~~~~~~~-~~~----- 279 (340)
T 3an0_A 211 TIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT-----PFQQLKQVVEEPSP-QLP----- 279 (340)
T ss_dssp HHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSC-----HHHHHHHHHHSCCC-CCC-----
T ss_pred ccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccc-----hHHHHHHHhcCCCC-CCC-----
Confidence 1245889999999964 34789999999999999999999999975321 11122222221111 000
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
......++.+++.+||..||++|||+.|++++
T Consensus 280 ----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 280 ----ADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp ----GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ----cccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 01122457788889999999999999999873
No 213
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=8.1e-37 Score=310.79 Aligned_cols=250 Identities=22% Similarity=0.338 Sum_probs=192.0
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||+|+.+ +++.||||++..... ..+.+.+|++++.++ +||||+++++++...+..++||||++
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~- 85 (299)
T 2r3i_A 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLH- 85 (299)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred hhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHc-CCCCeeeEEEEEecCCceEEEEEccc-
Confidence 468999999999999976 689999999865432 236788999999999 99999999999999999999999997
Q ss_pred CCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006886 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 86 ~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 159 (299)
T 2r3i_A 86 QDLKKFMDASA---LTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159 (299)
T ss_dssp EEHHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC
T ss_pred CCHHHHHHhhh---ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccc
Confidence 69999997653 235899999999999999999999998 999999999999999999999999998765432
Q ss_pred -CCCCCCccccCccccCCCC-CCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhh-cccccc-------
Q 006886 492 -TTATRTIGYRAPEVTETRK-ASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVRE-EWTAEV------- 561 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~~~~-~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------- 561 (627)
....+|+.|+|||++.+.. ++.++||||||+++|||++|+.||...... .....+... ......
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 233 (299)
T 2r3i_A 160 YTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------DQLFRIFRTLGTPDEVVWPGVTS 233 (299)
T ss_dssp TTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHHHCCCCTTTSTTGGG
T ss_pred cCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHH------HHHHHHHHHhCCCchhhhhHhhc
Confidence 2345788999999987765 799999999999999999999999754311 111111111 000000
Q ss_pred ---cchhhhcC--CCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006886 562 ---FDVELLKY--QDV----EEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 562 ---~d~~l~~~--~~~----~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~ 602 (627)
+.+..... ... +....++.+++.+|++.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 234 MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp STTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000000 000 011245677888999999999999999976
No 214
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=4.7e-37 Score=322.52 Aligned_cols=247 Identities=21% Similarity=0.278 Sum_probs=184.8
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCC------ceEEE
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD------EKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~------~~~lv 408 (627)
.+.||+|+||.||+|... +++.||||++..... ..+.+.+|+++++.+ +||||+++++++...+ ..++|
T Consensus 30 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~~~~lv 108 (371)
T 2xrw_A 30 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIV 108 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSCCSTTTCCEEEEE
T ss_pred eeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhc-CCCCccceEEeeccccccccccceEEE
Confidence 478999999999999965 688999999875432 245688999999999 9999999999997654 67999
Q ss_pred EecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006886 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 409 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~ 488 (627)
|||+++ +|.+++.. .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 109 ~e~~~~-~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 177 (371)
T 2xrw_A 109 MELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 177 (371)
T ss_dssp EECCSE-EHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC----
T ss_pred EEcCCC-CHHHHHhh-------ccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeeccccc
Confidence 999974 78888752 3889999999999999999999998 999999999999999999999999999876
Q ss_pred CCC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhh----------
Q 006886 489 NFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVRE---------- 555 (627)
Q Consensus 489 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~---------- 555 (627)
... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.+.... .....+...
T Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~~~i~~~~~~~~~~~~~ 251 (371)
T 2xrw_A 178 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI------DQWNKVIEQLGTPCPEFMK 251 (371)
T ss_dssp ------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHC-CCCCCHHHHT
T ss_pred ccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHHhCCCCHHHHH
Confidence 543 2346789999999999999999999999999999999999999764311 111111100
Q ss_pred ------------ccc--cc----ccchhhhcCC--ChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 556 ------------EWT--AE----VFDVELLKYQ--DVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 556 ------------~~~--~~----~~d~~l~~~~--~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
... .. .+........ .......++.+++.+||..||++|||++|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 252 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp TSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 000 00 0000000000 011224567889999999999999999999984
No 215
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=7.8e-37 Score=327.30 Aligned_cols=187 Identities=25% Similarity=0.371 Sum_probs=160.1
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCCeeeeeeEEeeC-----CceEEEE
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSK-----DEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-----~~~~lv~ 409 (627)
.+.||+|+||.||+|+.+ +++.||||++..... ..+.+.+|++++..+ +||||+++++++... ...++||
T Consensus 31 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~~~~~~lv~ 109 (432)
T 3n9x_A 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRL-KSDYIIRLYDLIIPDDLLKFDELYIVL 109 (432)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCTTTCCCEEEEE
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHc-CCCCcceEEEEEecCCCCcCCeEEEEE
Confidence 478999999999999965 578899999975432 346788999999999 899999999999776 5689999
Q ss_pred ecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006886 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||++ |+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 110 e~~~-~~L~~~~~~~-----~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla~~~~ 180 (432)
T 3n9x_A 110 EIAD-SDLKKLFKTP-----IFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180 (432)
T ss_dssp ECCS-EEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC-
T ss_pred ecCC-cCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCccccc
Confidence 9986 5999999753 35899999999999999999999998 9999999999999999999999999998764
Q ss_pred CC--------------------------CCCCCCccccCcccc-CCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 006886 490 FP--------------------------TTATRTIGYRAPEVT-ETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535 (627)
Q Consensus 490 ~~--------------------------~~~~~t~~y~aPE~~-~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~ 535 (627)
.. ....||+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 181 SEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp ------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 32 334578999999986 56679999999999999999998655543
No 216
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=7.6e-38 Score=318.86 Aligned_cols=252 Identities=23% Similarity=0.373 Sum_probs=178.6
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|... +++.||||++.... ...+++.+|++++..+ +||||+++++++...+..++||||+++|
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 98 (303)
T 2vwi_A 20 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQC-HHPNIVSYYTSFVVKDELWLVMKLLSGG 98 (303)
T ss_dssp EEECC---CCCEEEEEC----CEEEEECCC----------------CCCCC-CCTTBCCEEEEEESSSCEEEEEECCTTC
T ss_pred hheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhc-CCCCEeeEEEEEeecCCcEEEehhccCC
Confidence 478999999999999954 68999999986542 2356788899998888 8999999999999999999999999999
Q ss_pred CHHHHhhhcC---CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC-
Q 006886 416 SLFMLLHRNR---SDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP- 491 (627)
Q Consensus 416 ~L~~~l~~~~---~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~- 491 (627)
+|.+++.... ......+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 99 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 175 (303)
T 2vwi_A 99 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGG 175 (303)
T ss_dssp BHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHHHHHCC---
T ss_pred chHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccchheeccCC
Confidence 9999987521 112346899999999999999999999998 999999999999999999999999998765321
Q ss_pred --------CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006886 492 --------TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 492 --------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
....+|+.|+|||++.+ ..++.++||||||+++|||++|+.||....... . ......... ...
T Consensus 176 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~---~~~~~~~~~-~~~- 247 (303)
T 2vwi_A 176 DITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK---V---LMLTLQNDP-PSL- 247 (303)
T ss_dssp ------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG---H---HHHHHTSSC-CCT-
T ss_pred CccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh---H---HHHHhccCC-Ccc-
Confidence 22357889999999865 568999999999999999999999997543211 1 111111110 000
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006886 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~ 602 (627)
................+.+++.+||+.||.+|||+.|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 248 ETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp TC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0000000000111235677888999999999999999987
No 217
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=4.6e-37 Score=311.12 Aligned_cols=244 Identities=20% Similarity=0.319 Sum_probs=177.9
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccccC--HHHHHHHHHH-HHHhccCCCeeeeeeEEeeCCceEEEEecCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAAT--KREFEQQMEV-VGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~e~~~-l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||+++.. +++.||+|++...... ..++..|... +..+ +||||+++++++...+..++||||++
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~iv~~~~~~~~~~~~~lv~e~~~- 89 (290)
T 3fme_A 12 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTV-DCPFTVTFYGALFREGDVWICMELMD- 89 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSSEEEEEECCS-
T ss_pred HHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhC-CCCeEEEEeeeeeccCCEEEEEehhc-
Confidence 478999999999999964 6899999999754322 2333344444 4444 99999999999999999999999997
Q ss_pred CCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006886 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE-GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 415 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
|+|.+++..... ....+++..++.++.|++.||.|||++ + |+||||||+||+++.++.+||+|||+++.....
T Consensus 90 ~~l~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 165 (290)
T 3fme_A 90 TSLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA 165 (290)
T ss_dssp EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC-----------
T ss_pred cchHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCccccccccc
Confidence 588888765321 134699999999999999999999998 8 999999999999999999999999999876443
Q ss_pred -CCCCCCccccCcccc----CCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhh
Q 006886 492 -TTATRTIGYRAPEVT----ETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVEL 566 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~----~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 566 (627)
....+|+.|+|||++ .+..++.++||||||+++|||++|+.||..... ............... ..
T Consensus 166 ~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~-~~---- 235 (290)
T 3fme_A 166 KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT-----PFQQLKQVVEEPSPQ-LP---- 235 (290)
T ss_dssp ----CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC-----HHHHHHHHHHSCCCC-CC----
T ss_pred ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc-----hHHHHHHHhccCCCC-cc----
Confidence 233588999999996 566789999999999999999999999974321 111122222111110 00
Q ss_pred hcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 567 LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 567 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
. .....++.+++.+|++.+|++|||+.|++++
T Consensus 236 --~---~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 236 --A---DKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp --T---TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred --c---ccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 0 1122356778889999999999999999873
No 218
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.1e-36 Score=313.51 Aligned_cols=241 Identities=22% Similarity=0.352 Sum_probs=188.5
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc---------cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEE
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---------ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~---------~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv 408 (627)
.+.||+|+||.||+|..+ +++.||||++.... .....+.+|++++..+ +||||+++++++...+ .++|
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~-~~lv 92 (322)
T 2ycf_A 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFFDAED-YYIV 92 (322)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHC-CCTTBCCEEEEEESSS-EEEE
T ss_pred eeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhC-CCCCCceEeeEEcCCc-eEEE
Confidence 578999999999999975 57899999986432 1223588999999999 9999999999987654 8999
Q ss_pred EecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC---eEEeecccc
Q 006886 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN---GCISDVGLA 485 (627)
Q Consensus 409 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~---~ki~DfG~a 485 (627)
|||+++|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++. +||+|||++
T Consensus 93 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 164 (322)
T 2ycf_A 93 LELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHS 164 (322)
T ss_dssp EECCTTEETHHHHSTT-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred EecCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence 9999999999998753 35899999999999999999999998 999999999999987664 999999999
Q ss_pred cccCCCC---CCCCCccccCcccc---CCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccc
Q 006886 486 HLINFPT---TATRTIGYRAPEVT---ETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTA 559 (627)
Q Consensus 486 ~~~~~~~---~~~~t~~y~aPE~~---~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 559 (627)
+...... ...+|+.|+|||++ ....++.++||||||+++|||++|+.||...... ..+...+. .....
T Consensus 165 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~----~~~~~ 238 (322)
T 2ycf_A 165 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ--VSLKDQIT----SGKYN 238 (322)
T ss_dssp EECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS--SCHHHHHH----HTCCC
T ss_pred eecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH--HHHHHHHH----hCccc
Confidence 8765432 23478999999996 3567899999999999999999999999754322 12222111 11100
Q ss_pred cccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006886 560 EVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 560 ~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~ 602 (627)
..+... ......+.+++.+||..||++||++.|+++
T Consensus 239 --~~~~~~-----~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 239 --FIPEVW-----AEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp --CCHHHH-----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --cCchhh-----hhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 001100 011245678888999999999999999985
No 219
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=4.5e-37 Score=319.79 Aligned_cols=252 Identities=17% Similarity=0.246 Sum_probs=196.2
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEecccccC------------------HHHHHHHHHHHHHhccCCCeeeeeeEEe
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAAT------------------KREFEQQMEVVGTIGKHSNVVPVRAYYY 400 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~------------------~~~~~~e~~~l~~l~~h~niv~l~~~~~ 400 (627)
.+.||+|+||.||+|.. +++.||+|++...... .+.+.+|++++.++ +||||+++++++.
T Consensus 36 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~ 113 (348)
T 2pml_X 36 IRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDI-KNEYCLTCEGIIT 113 (348)
T ss_dssp EEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTC-CCTTBCCCSEEEE
T ss_pred EEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhC-CCCCcceEEEEEe
Confidence 47899999999999999 8999999998654221 17899999999999 8999999999999
Q ss_pred eCCceEEEEecCCCCCHHHH------hhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCeEecC
Q 006886 401 SKDEKLVVYSYMPAGSLFML------LHRNRSDGGTALDWNSRMKIALGTARGIAFIHS-EGGAKFTHGNIKSSNVLLTQ 473 (627)
Q Consensus 401 ~~~~~~lv~e~~~~g~L~~~------l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~Dlk~~NILl~~ 473 (627)
+.+..++||||+++|+|.++ +... ....+++..++.++.|++.||.|||+ .+ |+||||||+||+++.
T Consensus 114 ~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil~~~ 187 (348)
T 2pml_X 114 NYDEVYIIYEYMENDSILKFDEYFFVLDKN---YTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNILMDK 187 (348)
T ss_dssp SSSEEEEEEECCTTCBSSEESSSEESSCSS---SCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEEECT
T ss_pred eCCeEEEEEeccCCCcHHHHHHHhhhhhhc---cccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEEEcC
Confidence 99999999999999999998 4432 13579999999999999999999999 88 999999999999999
Q ss_pred CCCeEEeecccccccCCC--CCCCCCccccCccccCCC-CCCC-cchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHH
Q 006886 474 DLNGCISDVGLAHLINFP--TTATRTIGYRAPEVTETR-KASQ-KSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWV 549 (627)
Q Consensus 474 ~~~~ki~DfG~a~~~~~~--~~~~~t~~y~aPE~~~~~-~~~~-~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~ 549 (627)
++.+||+|||.+...... ....++..|+|||++.+. .++. ++||||||+++|||++|+.||...... ....
T Consensus 188 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~ 262 (348)
T 2pml_X 188 NGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-----VELF 262 (348)
T ss_dssp TSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-----HHHH
T ss_pred CCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-----HHHH
Confidence 999999999999876432 345678999999999877 5666 999999999999999999999754321 1112
Q ss_pred HHHhhhcccccc----cchhhhc---CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 550 RSVVREEWTAEV----FDVELLK---YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 550 ~~~~~~~~~~~~----~d~~l~~---~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
..+......... ....... ..........+.+++.+||+.||.+|||+.|++++
T Consensus 263 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 263 NNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 222111110000 0000000 00001223456788889999999999999999873
No 220
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=2.6e-37 Score=317.49 Aligned_cols=248 Identities=21% Similarity=0.341 Sum_probs=190.0
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCC
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~---~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|..++ .||+|++.... ...+.+.+|++++.++ +||||+++++++...+..++|+||++++
T Consensus 38 ~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~iv~e~~~~~ 114 (319)
T 2y4i_B 38 GELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQT-RHENVVLFMGACMSPPHLAIITSLCKGR 114 (319)
T ss_dssp CCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTC-CCTTBCCCCEEEECSSCEEEECBCCCSE
T ss_pred eeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcC-CCCCEeEEEEEEecCCceEEEeecccCC
Confidence 4789999999999999864 49999986532 2235577889999999 9999999999999999999999999999
Q ss_pred CHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC-----
Q 006886 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF----- 490 (627)
Q Consensus 416 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~----- 490 (627)
+|.+++... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++ ++.+||+|||+++....
T Consensus 115 ~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~ 186 (319)
T 2y4i_B 115 TLYSVVRDA----KIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGR 186 (319)
T ss_dssp EHHHHTTSS----CCCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCCC---------
T ss_pred cHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCccccccccccc
Confidence 999999754 245899999999999999999999998 99999999999998 68999999999876531
Q ss_pred ----CCCCCCCccccCccccCC---------CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcc
Q 006886 491 ----PTTATRTIGYRAPEVTET---------RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEW 557 (627)
Q Consensus 491 ----~~~~~~t~~y~aPE~~~~---------~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 557 (627)
.....+++.|+|||++.+ ..++.++||||||+++|||++|+.||..... .......... .
T Consensus 187 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~-~ 259 (319)
T 2y4i_B 187 REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA------EAIIWQMGTG-M 259 (319)
T ss_dssp -CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCH------HHHHHHHHTT-C
T ss_pred cccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHhccC-C
Confidence 112347889999999864 4578899999999999999999999975321 1111111111 1
Q ss_pred cccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhcccccc
Q 006886 558 TAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELR 613 (627)
Q Consensus 558 ~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~~~ 613 (627)
...... .. ...++.+++.+||..+|++|||+.++++.|+++.....+
T Consensus 260 ~~~~~~------~~---~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~ 306 (319)
T 2y4i_B 260 KPNLSQ------IG---MGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRR 306 (319)
T ss_dssp CCCCCC------SS---CCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC------
T ss_pred CCCCCc------CC---CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 111100 01 112466788899999999999999999999999876543
No 221
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=4e-37 Score=329.63 Aligned_cols=245 Identities=21% Similarity=0.297 Sum_probs=184.2
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCCHH
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 418 (627)
.+.||+|+||+||.+...+|+.||||++... ..+.+.+|++++..+.+||||+++++++.+.+..++||||++ |+|.
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~--~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~ 96 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQ 96 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGG--GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHH--HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHH
Confidence 3679999999998777678999999998653 345678899999887789999999999999999999999995 6999
Q ss_pred HHhhhcCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC-------------CCeEEeecc
Q 006886 419 MLLHRNRSDGG--TALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD-------------LNGCISDVG 483 (627)
Q Consensus 419 ~~l~~~~~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~-------------~~~ki~DfG 483 (627)
+++........ ...++..++.++.|++.||+|||+.+ |+||||||+|||++.+ +.+||+|||
T Consensus 97 ~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG 173 (434)
T 2rio_A 97 DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173 (434)
T ss_dssp HHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCT
T ss_pred HHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCceEEEEcccc
Confidence 99986432111 11234456789999999999999998 9999999999999754 489999999
Q ss_pred cccccCCCC--------CCCCCccccCccccCC-------CCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHH
Q 006886 484 LAHLINFPT--------TATRTIGYRAPEVTET-------RKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPR 547 (627)
Q Consensus 484 ~a~~~~~~~--------~~~~t~~y~aPE~~~~-------~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~ 547 (627)
+++...... ...||+.|+|||++.+ ..++.++|||||||++|||++ |+.||.......
T Consensus 174 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~------ 247 (434)
T 2rio_A 174 LCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE------ 247 (434)
T ss_dssp TCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH------
T ss_pred cceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH------
Confidence 998765421 2358899999999865 678999999999999999999 999996432110
Q ss_pred HHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006886 548 WVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 548 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~ 602 (627)
..+.......... ..........++.+++.+||+.||++|||+.|+++
T Consensus 248 --~~i~~~~~~~~~~-----~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 248 --SNIIRGIFSLDEM-----KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp --HHHHHTCCCCCCC-----TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --HHHhcCCCCcccc-----cccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1111111110000 11112344557788899999999999999999986
No 222
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=6.6e-37 Score=343.28 Aligned_cols=246 Identities=21% Similarity=0.356 Sum_probs=197.1
Q ss_pred hcccCcCCceeEEEEEecC----CcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecC
Q 006886 339 AEVLGKGSYGSTYKAILED----GTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~----~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~ 412 (627)
.+.||+|+||.||+|.+.. +..||||+++.... ..+.+.+|+.++..+ +||||+++++++. ++..++||||+
T Consensus 395 ~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~-~~~~~lv~E~~ 472 (656)
T 2j0j_A 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPHIVKLIGVIT-ENPVWIIMELC 472 (656)
T ss_dssp EEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred eeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEe-cCceEEEEEcC
Confidence 5789999999999999742 45799999865432 346789999999999 9999999999985 45689999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCC
Q 006886 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPT 492 (627)
Q Consensus 413 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~~ 492 (627)
++|+|.+++.... ..+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 473 ~~g~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~ 545 (656)
T 2j0j_A 473 TLGELRSFLQVRK----FSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 545 (656)
T ss_dssp TTCBHHHHHHHTT----TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC--
T ss_pred CCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCCeecCCCc
Confidence 9999999998542 35899999999999999999999998 9999999999999999999999999998765432
Q ss_pred -----CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhh
Q 006886 493 -----TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVEL 566 (627)
Q Consensus 493 -----~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 566 (627)
...+++.|+|||++.+..++.++||||||+++|||++ |..||..... ......+...... .
T Consensus 546 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~------~~~~~~i~~~~~~-~------ 612 (656)
T 2j0j_A 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN------NDVIGRIENGERL-P------ 612 (656)
T ss_dssp --------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHHHHTCCC-C------
T ss_pred ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH------HHHHHHHHcCCCC-C------
Confidence 2235678999999988899999999999999999997 9999975421 1112222111110 0
Q ss_pred hcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccc
Q 006886 567 LKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQP 610 (627)
Q Consensus 567 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~ 610 (627)
........+.+++.+||..||++|||+.|+++.|+++.+.
T Consensus 613 ----~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 613 ----MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----CCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 0011223567788899999999999999999999998654
No 223
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.1e-36 Score=318.31 Aligned_cols=259 Identities=20% Similarity=0.299 Sum_probs=181.8
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCc-------eEEEEe
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDE-------KLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~-------~~lv~e 410 (627)
.+.||+|+||.||+|+.. +++.||||++.........+.++++.+..+ +||||+++++++...+. .++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~~~lv~e 106 (360)
T 3e3p_A 28 ERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVL-HHPNIVQLQSYFYTLGERDRRDIYLNVVME 106 (360)
T ss_dssp C----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHH-CCTTBCCEEEEEEEECSSCTTCEEEEEEEE
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhc-CCCCcccHHHhhhccccccccceeEEEEee
Confidence 467999999999999975 689999999876554455667788888888 99999999999976443 789999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHH--hcCCCCeeecCCCCCCeEecC-CCCeEEeecccccc
Q 006886 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH--SEGGAKFTHGNIKSSNVLLTQ-DLNGCISDVGLAHL 487 (627)
Q Consensus 411 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--~~~~~~ivH~Dlk~~NILl~~-~~~~ki~DfG~a~~ 487 (627)
|+++ +|...+.... .....+++..+..++.|++.||.||| +.+ |+||||||+|||++. ++.+||+|||+++.
T Consensus 107 ~~~~-~l~~~~~~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~ 181 (360)
T 3e3p_A 107 YVPD-TLHRCCRNYY-RRQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADGTLKLCDFGSAKK 181 (360)
T ss_dssp CCSC-BHHHHHHHHH-TTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTTEEEECCCTTCBC
T ss_pred cccc-cHHHHHHHHh-hcccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCCcEEEeeCCCcee
Confidence 9986 5554443211 12346899999999999999999999 877 999999999999997 89999999999987
Q ss_pred cCCC---CCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcc------
Q 006886 488 INFP---TTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEW------ 557 (627)
Q Consensus 488 ~~~~---~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~------ 557 (627)
.... ....+|+.|+|||++.+. .++.++||||||+++|||++|+.||...... .....+.....
T Consensus 182 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~------~~~~~~~~~~~~~~~~~ 255 (360)
T 3e3p_A 182 LSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA------GQLHEIVRVLGCPSREV 255 (360)
T ss_dssp CCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHHHCCCCHHH
T ss_pred cCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH------HHHHHHHHHcCCCCHHH
Confidence 6543 234578999999998654 4899999999999999999999999764321 11111111000
Q ss_pred ----cccccchhhhc----------CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhcc
Q 006886 558 ----TAEVFDVELLK----------YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM--IEQIQQ 609 (627)
Q Consensus 558 ----~~~~~d~~l~~----------~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~--L~~~~~ 609 (627)
.....+..... .........++.+++.+||+.||.+|||+.|++++ +.++..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 323 (360)
T 3e3p_A 256 LRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD 323 (360)
T ss_dssp HHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGC
T ss_pred HHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCC
Confidence 00000000000 00001134567788899999999999999999874 444443
No 224
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=5.3e-37 Score=319.83 Aligned_cols=254 Identities=20% Similarity=0.291 Sum_probs=194.6
Q ss_pred hcccCcCCceeEEEEEec-CC-cEEEEEEecccccCHHHHHHHHHHHHHhccCCC------eeeeeeEEeeCCceEEEEe
Q 006886 339 AEVLGKGSYGSTYKAILE-DG-TTVVVKRLREVAATKREFEQQMEVVGTIGKHSN------VVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~-~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~n------iv~l~~~~~~~~~~~lv~e 410 (627)
.+.||+|+||.||+|... ++ +.||+|+++......+.+.+|++++..+ +|++ ++.+.+++...+..++|||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~~lv~e 102 (355)
T 2eu9_A 24 VGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKI-KEKDKENKFLCVLMSDWFNFHGHMCIAFE 102 (355)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHH-HHHCTTSCSCBCCEEEEEEETTEEEEEEE
T ss_pred EEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHH-hhcCCCCceeEEEeeeeeeeCCeEEEEEe
Confidence 478999999999999965 34 6899999976555567788899999988 5554 8899999999999999999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe-------------------
Q 006886 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLL------------------- 471 (627)
Q Consensus 411 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl------------------- 471 (627)
|+ ++++.+++.... ...+++..++.++.|++.||.|||+.+ |+||||||+|||+
T Consensus 103 ~~-~~~l~~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~ 175 (355)
T 2eu9_A 103 LL-GKNTFEFLKENN---FQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSCEEKS 175 (355)
T ss_dssp CC-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred cc-CCChHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecccccccccccccccccc
Confidence 99 667777776542 246899999999999999999999998 9999999999999
Q ss_pred cCCCCeEEeecccccccCCC-CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHH
Q 006886 472 TQDLNGCISDVGLAHLINFP-TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVR 550 (627)
Q Consensus 472 ~~~~~~ki~DfG~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~ 550 (627)
+.++.+||+|||+++..... ....+|+.|+|||++.+..++.++||||||+++|||++|+.||......+ ....+.
T Consensus 176 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~---~~~~~~ 252 (355)
T 2eu9_A 176 VKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE---HLVMME 252 (355)
T ss_dssp ESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHH
T ss_pred cCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHH
Confidence 67889999999999876443 34568999999999999999999999999999999999999997543211 111111
Q ss_pred HHhhhc--------ccccccch---------------------hhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 006886 551 SVVREE--------WTAEVFDV---------------------ELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVV 601 (627)
Q Consensus 551 ~~~~~~--------~~~~~~d~---------------------~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~ 601 (627)
...... .....+.. ..........+..++.+++.+||+.||++|||+.|++
T Consensus 253 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l 332 (355)
T 2eu9_A 253 KILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEAL 332 (355)
T ss_dssp HHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHT
T ss_pred HHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHh
Confidence 111000 00000000 0000011123345788899999999999999999998
Q ss_pred HH
Q 006886 602 RM 603 (627)
Q Consensus 602 ~~ 603 (627)
++
T Consensus 333 ~h 334 (355)
T 2eu9_A 333 LH 334 (355)
T ss_dssp TS
T ss_pred cC
Confidence 63
No 225
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2e-36 Score=317.71 Aligned_cols=247 Identities=22% Similarity=0.319 Sum_probs=188.1
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccccC---HHHHHHHHHHHHHhccCCCeeeeeeEEeeCCce------EEE
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAAT---KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEK------LVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~------~lv 408 (627)
.+.||+|+||.||+|... +|+.||||++...... .+.+.+|++++..+ +||||+++++++...+.. ++|
T Consensus 47 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~~lv 125 (371)
T 4exu_A 47 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-QHENVIGLLDVFTPASSLRNFYDFYLV 125 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSSTTCCCCEEE
T ss_pred EeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhc-CCCCchhhhhheeccCCcccceeEEEE
Confidence 478999999999999965 6899999999764332 46788999999999 899999999999877654 999
Q ss_pred EecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006886 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 409 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~ 488 (627)
|||+. |+|.+++.. .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 126 ~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 194 (371)
T 4exu_A 126 MPFMQ-TDLQKIMGM-------EFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHA 194 (371)
T ss_dssp EECCC-EEHHHHTTS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTCC---
T ss_pred Ecccc-ccHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCccccc
Confidence 99997 688887742 3899999999999999999999998 999999999999999999999999999876
Q ss_pred CCC-CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcc------ccc
Q 006886 489 NFP-TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEW------TAE 560 (627)
Q Consensus 489 ~~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 560 (627)
... ....+|+.|+|||++.+ ..++.++||||||+++|||++|+.||..... ......+..... ...
T Consensus 195 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~~i~~~~~~~~~~~~~~ 268 (371)
T 4exu_A 195 DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY------LDQLTQILKVTGVPGTEFVQK 268 (371)
T ss_dssp -----CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHHHCCCCHHHHTT
T ss_pred ccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHHHHhCCCcHHHHHH
Confidence 543 34567999999999877 7889999999999999999999999975431 111111111000 000
Q ss_pred ccch-------hhhc--CCCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 561 VFDV-------ELLK--YQDV----EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 561 ~~d~-------~l~~--~~~~----~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
..+. .... .... +.....+.+++.+||+.||++|||+.|++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 269 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp CSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0000 0000 0000 1113467788889999999999999999874
No 226
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=9.6e-37 Score=319.20 Aligned_cols=251 Identities=22% Similarity=0.298 Sum_probs=174.9
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc---CHHHHHHHHHHHHHhccCCCeeeeeeEEeeC------CceEEE
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYYSK------DEKLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~------~~~~lv 408 (627)
.+.||+|+||.||+|... +|+.||||++..... ..+.+.+|++++..+ +||||+++++++... ...++|
T Consensus 34 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~~lv 112 (367)
T 2fst_X 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLV 112 (367)
T ss_dssp EEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSGGGCCCCEEE
T ss_pred eeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEecCCccccCCeEEEE
Confidence 478999999999999954 689999999865432 345788999999999 899999999998754 557899
Q ss_pred EecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006886 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 409 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~ 488 (627)
+||+ +++|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 113 ~e~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 182 (367)
T 2fst_X 113 THLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHT 182 (367)
T ss_dssp EECC-CEECC-----------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC-------
T ss_pred eccc-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence 9999 7899888864 25899999999999999999999998 999999999999999999999999999876
Q ss_pred CCC-CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhc---ccccccc
Q 006886 489 NFP-TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREE---WTAEVFD 563 (627)
Q Consensus 489 ~~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d 563 (627)
... ....+|..|+|||++.+ ..++.++|||||||++|||++|+.||.+....+ ....+....... ....+..
T Consensus 183 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~l~~i~~~~g~p~~~~~~~~~~ 259 (367)
T 2fst_X 183 ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID---QLKLILRLVGTPGAELLKKISS 259 (367)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCSCCHHHHTTCCC
T ss_pred cccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCCHHHHHHhhh
Confidence 543 34568999999999876 678999999999999999999999997643211 111111111000 0000000
Q ss_pred h-------hhhc--CCChH----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 564 V-------ELLK--YQDVE----EEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 564 ~-------~l~~--~~~~~----~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
. .+.. ..... .....+.+++.+||..||++|||+.|++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0 0000 00000 112356788889999999999999999874
No 227
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=6.1e-37 Score=320.93 Aligned_cols=251 Identities=20% Similarity=0.304 Sum_probs=191.0
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCCeeeeeeEEeeC-----CceEEEEe
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSK-----DEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-----~~~~lv~e 410 (627)
.+.||+|+||.||+|... +++.||||++..... ..+.+.+|++++.++ +||||+++++++... ...++|+|
T Consensus 32 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~iv~e 110 (364)
T 3qyz_A 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQD 110 (364)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHC-CCTTBCCCCEEECCSSTTTCCCEEEEEE
T ss_pred EEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhc-CCCCCccceeEEecCCccccceEEEEEc
Confidence 478999999999999965 688899999875332 336788999999999 899999999999765 36799999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC
Q 006886 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF 490 (627)
Q Consensus 411 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~ 490 (627)
|++ |+|.+++... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 111 ~~~-~~L~~~l~~~------~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 180 (364)
T 3qyz_A 111 LME-TDLYKLLKTQ------HLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180 (364)
T ss_dssp CCS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred ccC-cCHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence 997 5999998753 4899999999999999999999998 99999999999999999999999999986642
Q ss_pred C-------CCCCCCccccCccccC-CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccc---c
Q 006886 491 P-------TTATRTIGYRAPEVTE-TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWT---A 559 (627)
Q Consensus 491 ~-------~~~~~t~~y~aPE~~~-~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~ 559 (627)
. ....||+.|+|||++. +..++.++||||||+++|||++|+.||......+ ....+......... .
T Consensus 181 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~ 257 (364)
T 3qyz_A 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD---QLNHILGILGSPSQEDLN 257 (364)
T ss_dssp GGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG---HHHHHHHHHCSCCHHHHH
T ss_pred CCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH---HHHHHHHHhCCCCHHHHH
Confidence 2 2346899999999864 4558999999999999999999999997653222 11111111100000 0
Q ss_pred cccch-------hhhc--CCCh----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 560 EVFDV-------ELLK--YQDV----EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 560 ~~~d~-------~l~~--~~~~----~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
...+. .... .... +....++.+++.+||+.||++|||+.|++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 0000 0000 1112456788889999999999999999874
No 228
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=7.4e-37 Score=316.56 Aligned_cols=245 Identities=21% Similarity=0.293 Sum_probs=167.3
Q ss_pred cccCcCCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEee----CCceEEEEecCCC
Q 006886 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS----KDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lv~e~~~~ 414 (627)
+.||+|+||.||+|..+ +++.||||++... ....+|+..+.+..+||||+++++++.. ....++||||+++
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~g 110 (336)
T 3fhr_A 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEG 110 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTT
T ss_pred eeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCC
Confidence 56999999999999976 6899999998653 2233444444444499999999999876 3457899999999
Q ss_pred CCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC---CCCeEEeecccccccCCC
Q 006886 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ---DLNGCISDVGLAHLINFP 491 (627)
Q Consensus 415 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~---~~~~ki~DfG~a~~~~~~ 491 (627)
|+|.+++.... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++. ++.+||+|||+++.....
T Consensus 111 g~L~~~l~~~~---~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~ 184 (336)
T 3fhr_A 111 GELFSRIQERG---DQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN 184 (336)
T ss_dssp EEHHHHHHTC----CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC---
T ss_pred CCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEeccccceecccc
Confidence 99999998642 246999999999999999999999998 999999999999986 455999999999866433
Q ss_pred --CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006886 492 --TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 492 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
....+|+.|+|||++.+..++.++||||||+++|||++|+.||.......... ......... .........
T Consensus 185 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~~~~~~~~~----~~~~~~~~~ 257 (336)
T 3fhr_A 185 ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP---GMKRRIRLG----QYGFPNPEW 257 (336)
T ss_dssp -------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------------CCCTTTS
T ss_pred ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh---hHHHhhhcc----ccccCchhh
Confidence 34457899999999988889999999999999999999999997543322110 000000000 000000001
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006886 570 QDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMI 604 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L 604 (627)
.....++.+++.+||+.||++|||+.|++++-
T Consensus 258 ---~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 289 (336)
T 3fhr_A 258 ---SEVSEDAKQLIRLLLKTDPTERLTITQFMNHP 289 (336)
T ss_dssp ---TTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred ---ccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 11233566788899999999999999999843
No 229
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=3.7e-36 Score=308.15 Aligned_cols=242 Identities=19% Similarity=0.283 Sum_probs=189.5
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEeccccc---CHHHHHHHHHHHHHhcc-CCCeeeeeeEEeeCCceEEEEecCCC
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAA---TKREFEQQMEVVGTIGK-HSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~~-h~niv~l~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||++...+++.||||++..... ..+.+.+|++++.++.. |+||+++++++...+..++||| +.+
T Consensus 33 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~ 111 (313)
T 3cek_A 33 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 111 (313)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCS
T ss_pred EEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCC
Confidence 478999999999999988899999999865432 34678899999999954 7999999999999999999999 568
Q ss_pred CCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006886 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 415 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
++|.+++... ..+++..++.++.|++.||.|||+.+ |+||||||+||+++ ++.+||+|||+++.....
T Consensus 112 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~~ 182 (313)
T 3cek_A 112 IDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 182 (313)
T ss_dssp EEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCC-------
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEE-CCeEEEeeccccccccCcccc
Confidence 8999999864 35899999999999999999999998 99999999999996 489999999999876432
Q ss_pred ---CCCCCCccccCccccCC-----------CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcc
Q 006886 492 ---TTATRTIGYRAPEVTET-----------RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEW 557 (627)
Q Consensus 492 ---~~~~~t~~y~aPE~~~~-----------~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 557 (627)
....+++.|+|||++.+ ..++.++||||||+++|||++|+.||..... .............
T Consensus 183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~~~~~~~~~~~~ 257 (313)
T 3cek_A 183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLHAIIDPNH 257 (313)
T ss_dssp -------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHHHHHCTTS
T ss_pred ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH-----HHHHHHHHHhccc
Confidence 23357899999999865 4688899999999999999999999974321 1112222221111
Q ss_pred cccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHH
Q 006886 558 TAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMIE 605 (627)
Q Consensus 558 ~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~ 605 (627)
.... .... ...+.+++.+||+.||++||++.|++++-.
T Consensus 258 ~~~~-------~~~~---~~~l~~li~~~l~~dp~~Rps~~ell~h~~ 295 (313)
T 3cek_A 258 EIEF-------PDIP---EKDLQDVLKCCLKRDPKQRISIPELLAHPY 295 (313)
T ss_dssp CCCC-------CCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred ccCC-------cccc---hHHHHHHHHHHccCCcccCcCHHHHhcCcc
Confidence 1000 0111 235667888999999999999999988543
No 230
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=7.7e-37 Score=323.33 Aligned_cols=260 Identities=20% Similarity=0.314 Sum_probs=188.5
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCc------eEEEEecC
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDE------KLVVYSYM 412 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~------~~lv~e~~ 412 (627)
.+.||+|+||.||+|+...+..||+|++..... ...+|+++++.+ +||||+++++++...+. .++||||+
T Consensus 45 ~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~---~~~~E~~il~~l-~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~ 120 (394)
T 4e7w_A 45 CKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR---FKNRELQIMRIV-KHPNVVDLKAFFYSNGDKKDEVFLNLVLEYV 120 (394)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEEECCTT---SCCHHHHHHHTC-CCTTBCCEEEEEEEESSSSSCEEEEEEEECC
T ss_pred eEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc---hHHHHHHHHHhC-CCCCcceEEEEEEecCCCCCceEEEEEeecc
Confidence 478999999999999988777899998864322 224688999999 99999999999975443 78999999
Q ss_pred CCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEec-CCCCeEEeecccccccCC-
Q 006886 413 PAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLT-QDLNGCISDVGLAHLINF- 490 (627)
Q Consensus 413 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~-~~~~~ki~DfG~a~~~~~- 490 (627)
+++.+........ ....+++..+..++.|++.||.|||+.+ |+||||||+|||++ .++.+||+|||+++....
T Consensus 121 ~~~l~~~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~ 195 (394)
T 4e7w_A 121 PETVYRASRHYAK--LKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG 195 (394)
T ss_dssp SEEHHHHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred CccHHHHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCC
Confidence 8754443332221 1246899999999999999999999998 99999999999999 799999999999987643
Q ss_pred --CCCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcc-------ccc
Q 006886 491 --PTTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEW-------TAE 560 (627)
Q Consensus 491 --~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 560 (627)
.....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+....+ .+...+. ...... ...
T Consensus 196 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~--~l~~i~~-~~g~p~~~~~~~~~~~ 272 (394)
T 4e7w_A 196 EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID--QLVEIIK-VLGTPSREQIKTMNPN 272 (394)
T ss_dssp CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHH-HHCCCCHHHHHHHCGG
T ss_pred CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHH-HhCCCCHHHHHhhChh
Confidence 2345678999999998764 58999999999999999999999997643211 1111111 000000 000
Q ss_pred ccchhhh--cCCCh-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--HHhhccc
Q 006886 561 VFDVELL--KYQDV-----EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM--IEQIQQP 610 (627)
Q Consensus 561 ~~d~~l~--~~~~~-----~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~--L~~~~~~ 610 (627)
.....+. ..... .....++.+++.+||..||.+|||+.|++++ ++++...
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~ 331 (394)
T 4e7w_A 273 YMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTG 331 (394)
T ss_dssp GSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTSS
T ss_pred hhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhccc
Confidence 0000000 00000 0122467788889999999999999999874 4444433
No 231
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=6.9e-37 Score=315.34 Aligned_cols=252 Identities=23% Similarity=0.338 Sum_probs=191.6
Q ss_pred hcccCcCCceeEEEEEe--cCCcEEEEEEeccccc---CHHHHHHHHHHHHHhc--cCCCeeeeeeEEe-----eCCceE
Q 006886 339 AEVLGKGSYGSTYKAIL--EDGTTVVVKRLREVAA---TKREFEQQMEVVGTIG--KHSNVVPVRAYYY-----SKDEKL 406 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~--~~~~~vavK~l~~~~~---~~~~~~~e~~~l~~l~--~h~niv~l~~~~~-----~~~~~~ 406 (627)
.+.||+|+||.||+|+. .+++.||+|++..... ....+.+|++++..+. +||||+++++++. .....+
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~ 95 (326)
T 1blx_A 16 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 95 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEE
T ss_pred eeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEE
Confidence 47899999999999997 3678999999865432 2235667887777664 7999999999987 456788
Q ss_pred EEEecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccc
Q 006886 407 VVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH 486 (627)
Q Consensus 407 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~ 486 (627)
+|+||++ |+|.+++.... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 96 lv~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~Dfg~~~ 168 (326)
T 1blx_A 96 LVFEHVD-QDLTTYLDKVP---EPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLAR 168 (326)
T ss_dssp EEEECCS-CBHHHHHHHSC---TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred EEEecCC-CCHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEecCcccc
Confidence 9999997 69999998653 235899999999999999999999998 9999999999999999999999999998
Q ss_pred ccCCC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhh-------hc
Q 006886 487 LINFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVR-------EE 556 (627)
Q Consensus 487 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-------~~ 556 (627)
..... ....+++.|+|||++.+..++.++||||||+++|||++|+.||..... ......+.. ..
T Consensus 169 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~i~~~~~~~~~~~ 242 (326)
T 1blx_A 169 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD------VDQLGKILDVIGLPGEED 242 (326)
T ss_dssp CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHHHCCCCGGG
T ss_pred cccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH------HHHHHHHHHHcCCCCccc
Confidence 76432 334578999999999998999999999999999999999999975432 111111111 00
Q ss_pred ccccccch--hhhc------CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 557 WTAEVFDV--ELLK------YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 557 ~~~~~~d~--~l~~------~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
+......+ .... ..........+.+++.+||..||++|||+.|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 243 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp SCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 10000000 0000 00001122356678889999999999999999863
No 232
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=3.1e-36 Score=304.72 Aligned_cols=241 Identities=21% Similarity=0.324 Sum_probs=194.1
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc---cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA---ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||+|..+ +++.||+|++.... ...+.+.+|++++.++ +||||+++++++...+..++|+||+++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 105 (287)
T 2wei_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHPNIMKLFEILEDSSSFYIVGELYTG 105 (287)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhc-cCCCccEEEEEEeCCCeEEEEEEccCC
Confidence 578999999999999976 68999999986542 3567899999999999 999999999999999999999999999
Q ss_pred CCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC---CCeEEeecccccccCCC
Q 006886 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD---LNGCISDVGLAHLINFP 491 (627)
Q Consensus 415 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~---~~~ki~DfG~a~~~~~~ 491 (627)
++|.+++.... .+++..++.++.|++.||.|||+.+ |+||||||+||+++.+ +.+||+|||++......
T Consensus 106 ~~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~ 177 (287)
T 2wei_A 106 GELFDEIIKRK-----RFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (287)
T ss_dssp CBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCcceeecCC
Confidence 99999987642 5899999999999999999999998 9999999999999764 46999999999876543
Q ss_pred C---CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhc
Q 006886 492 T---TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLK 568 (627)
Q Consensus 492 ~---~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 568 (627)
. ...+++.|+|||++.+ .++.++||||||+++|+|++|+.||..... ......+....... + ...
T Consensus 178 ~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~---~--~~~ 245 (287)
T 2wei_A 178 TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE------YDILKRVETGKYAF---D--LPQ 245 (287)
T ss_dssp SSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCCC---C--SGG
T ss_pred CccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH------HHHHHHHHcCCCCC---C--chh
Confidence 2 2236788999999876 489999999999999999999999975421 11122221111110 0 001
Q ss_pred CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 569 YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 569 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
.... ..++.+++.+|+..+|++|||+.|++++
T Consensus 246 ~~~~---~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 246 WRTI---SDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp GTTS---CHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred hhhc---CHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 1111 2356678889999999999999999983
No 233
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=4.2e-36 Score=305.75 Aligned_cols=241 Identities=22% Similarity=0.378 Sum_probs=185.8
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEee-------------CCc
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS-------------KDE 404 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~-------------~~~ 404 (627)
.+.||+|+||.||+|+.. +++.||||++.......+.+.+|++++..+ +||||+++++++.+ ...
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (303)
T 1zy4_A 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL-NHQYVVRYYAAWLERRNFVKPMTAVKKKST 89 (303)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEECCCCCC------CEEE
T ss_pred hheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHhhcchhhhhcccccCCc
Confidence 478999999999999965 789999999976555567789999999999 89999999998865 345
Q ss_pred eEEEEecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccc
Q 006886 405 KLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGL 484 (627)
Q Consensus 405 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~ 484 (627)
.++||||+++|+|.+++... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~ 162 (303)
T 1zy4_A 90 LFIQMEYCENGTLYDLIHSE----NLNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGL 162 (303)
T ss_dssp EEEEEECCCSCBHHHHHHHS----CGGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred eEEEEecCCCCCHHHhhhcc----ccccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEEEeeCcc
Confidence 78999999999999999854 245788999999999999999999998 99999999999999999999999999
Q ss_pred ccccCCC------------------CCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCH
Q 006886 485 AHLINFP------------------TTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDL 545 (627)
Q Consensus 485 a~~~~~~------------------~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~ 545 (627)
++..... ....+++.|+|||++.+. .++.++||||||+++|||++ ||... ...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~-----~~~ 234 (303)
T 1zy4_A 163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG-----MER 234 (303)
T ss_dssp CSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH-----HHH
T ss_pred hhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc-----hhH
Confidence 9765421 223478899999998764 78999999999999999998 55321 011
Q ss_pred HHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 546 PRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 546 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
........... ..+.+. ........+.+++.+||+.||.+|||+.|++++
T Consensus 235 ~~~~~~~~~~~---~~~~~~-----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 235 VNILKKLRSVS---IEFPPD-----FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHHHHHSTT---CCCCTT-----CCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHhccccc---cccCcc-----ccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 11111111100 000110 111223356678889999999999999999874
No 234
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=3.6e-36 Score=306.96 Aligned_cols=240 Identities=20% Similarity=0.321 Sum_probs=189.3
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc-----cCHHHHHHHHHHHHHhccCCCeeeeeeEEe--eCCceEEEEe
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-----ATKREFEQQMEVVGTIGKHSNVVPVRAYYY--SKDEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~-----~~~~~~~~e~~~l~~l~~h~niv~l~~~~~--~~~~~~lv~e 410 (627)
.+.||+|+||.||++... +++.||+|++.... ...+.+.+|++++..+ +||||+++++++. +....++|||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~lv~e 88 (305)
T 2wtk_C 10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-RHKNVIQLVDVLYNEEKQKMYMVME 88 (305)
T ss_dssp CCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEECC---CEEEEEE
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhc-CCCCeeEEEEEEEcCCCCeEEEEeh
Confidence 478999999999999965 68899999986542 2356789999999999 8999999999984 4557899999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC
Q 006886 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF 490 (627)
Q Consensus 411 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~ 490 (627)
|++++ |.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 89 ~~~~~-l~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~ 161 (305)
T 2wtk_C 89 YCVCG-MQEMLDSVP---EKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHP 161 (305)
T ss_dssp CCSEE-HHHHHHHST---TCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred hccCC-HHHHHHhCc---ccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeeccccccccCc
Confidence 99876 777776543 246899999999999999999999998 99999999999999999999999999987643
Q ss_pred C------CCCCCCccccCccccCCCC--CCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006886 491 P------TTATRTIGYRAPEVTETRK--ASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 491 ~------~~~~~t~~y~aPE~~~~~~--~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
. ....+++.|+|||++.+.. ++.++||||||+++|||++|+.||.... .......+......
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~i~~~~~~---- 231 (305)
T 2wtk_C 162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN------IYKLFENIGKGSYA---- 231 (305)
T ss_dssp TCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHCCCC----
T ss_pred cccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch------HHHHHHHHhcCCCC----
Confidence 2 2345789999999987644 3789999999999999999999997532 22222221111100
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006886 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMI 604 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L 604 (627)
... .....+.+++.+||..||++|||+.|++++-
T Consensus 232 -----~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 265 (305)
T 2wtk_C 232 -----IPG---DCGPPLSDLLKGMLEYEPAKRFSIRQIRQHS 265 (305)
T ss_dssp -----CCS---SSCHHHHHHHHHHTCSSTTTSCCHHHHHHSH
T ss_pred -----CCC---ccCHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence 001 1123566788899999999999999999753
No 235
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=9.6e-37 Score=321.64 Aligned_cols=252 Identities=22% Similarity=0.349 Sum_probs=185.1
Q ss_pred hcccCcCCceeEEEEEe-cCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCC--------------
Q 006886 339 AEVLGKGSYGSTYKAIL-EDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD-------------- 403 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~-------------- 403 (627)
.+.||+|+||.||+|.. .+|+.||||++.... ....+|+++++.+ +||||+++++++....
T Consensus 12 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~ 87 (383)
T 3eb0_A 12 GKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP---RYKNRELDIMKVL-DHVNIIKLVDYFYTTGDEEPKPPQPPDDHN 87 (383)
T ss_dssp EEEEECC-CEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHTTC-CCTTBCCEEEEEEEC---------------
T ss_pred EEEEEeccCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHHc-CCCCccchhheeeecCcccccccccccccc
Confidence 47899999999999996 478999999986542 2234789999999 9999999999985432
Q ss_pred ------------------------ceEEEEecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 006886 404 ------------------------EKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKF 459 (627)
Q Consensus 404 ------------------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~i 459 (627)
..++||||++ |+|.+.+..... ....+++..+..++.|++.||.|||+.+ |
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g---i 162 (383)
T 3eb0_A 88 KLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIR-SGRSIPMNLISIYIYQLFRAVGFIHSLG---I 162 (383)
T ss_dssp ----------------------CCEEEEEECCCS-EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHTTT---E
T ss_pred cccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCc---C
Confidence 3789999998 588877764221 1346899999999999999999999998 9
Q ss_pred eecCCCCCCeEec-CCCCeEEeecccccccCCC---CCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCC
Q 006886 460 THGNIKSSNVLLT-QDLNGCISDVGLAHLINFP---TTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPL 534 (627)
Q Consensus 460 vH~Dlk~~NILl~-~~~~~ki~DfG~a~~~~~~---~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~p~ 534 (627)
+||||||+|||++ .++.+||+|||+++..... ....+|+.|+|||++.+. .++.++||||+||++|||++|+.||
T Consensus 163 ~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf 242 (383)
T 3eb0_A 163 CHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLF 242 (383)
T ss_dssp ECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred ccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCC
Confidence 9999999999998 6889999999999876432 344578899999998764 4899999999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHhhhccccccc--chh-----h--hcCCCh-----HHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 006886 535 QHSGHDDVVDLPRWVRSVVREEWTAEVF--DVE-----L--LKYQDV-----EEEMVQMLQIALSCVAKVPDSRPKMDDV 600 (627)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d~~-----l--~~~~~~-----~~~~~~l~~l~~~Cl~~~p~~RPs~~ev 600 (627)
.+....+ .+...+. .........+. ++. . ...... .....++.+++.+||..+|++|||+.|+
T Consensus 243 ~~~~~~~--~~~~i~~-~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~ 319 (383)
T 3eb0_A 243 SGETSID--QLVRIIQ-IMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEA 319 (383)
T ss_dssp CCSSHHH--HHHHHHH-HHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred CCCChHH--HHHHHHH-HhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHH
Confidence 7643211 1111111 00000000000 000 0 000000 1122356788889999999999999999
Q ss_pred HH
Q 006886 601 VR 602 (627)
Q Consensus 601 ~~ 602 (627)
++
T Consensus 320 l~ 321 (383)
T 3eb0_A 320 MA 321 (383)
T ss_dssp HT
T ss_pred hc
Confidence 86
No 236
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1e-36 Score=324.98 Aligned_cols=253 Identities=23% Similarity=0.314 Sum_probs=185.1
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCC------ceEEEEec
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD------EKLVVYSY 411 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~------~~~lv~e~ 411 (627)
.+.||+|+||.||+|+.. +|+.||||++.... +.+.+|++++..+ +||||+++++++.... ..++||||
T Consensus 59 ~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~E~~il~~l-~hpniv~l~~~~~~~~~~~~~~~~~lv~e~ 134 (420)
T 1j1b_A 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---RFKNRELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDY 134 (420)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHHTC-CCTTBCCEEEEEEEEETTTTEEEEEEEEEC
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEecccc---hhHHHHHHHHHHc-CCCCccceeeEEeccCCCCcceeEEeehhc
Confidence 478999999999999975 58999999986532 2234789999999 9999999999986421 25689999
Q ss_pred CCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCC-CCeEEeecccccccCC
Q 006886 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQD-LNGCISDVGLAHLINF 490 (627)
Q Consensus 412 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~-~~~ki~DfG~a~~~~~ 490 (627)
+++ ++.+.+..... ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.+ +.+||+|||+++....
T Consensus 135 ~~~-~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~ 209 (420)
T 1j1b_A 135 VPE-TVYRVARHYSR-AKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209 (420)
T ss_dssp CCE-EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred ccc-cHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhhhhccc
Confidence 976 66666543211 1346899999999999999999999998 9999999999999965 5689999999987643
Q ss_pred C---CCCCCCccccCccccCCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHh-------hh--cc
Q 006886 491 P---TTATRTIGYRAPEVTETR-KASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVV-------RE--EW 557 (627)
Q Consensus 491 ~---~~~~~t~~y~aPE~~~~~-~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~-------~~--~~ 557 (627)
. ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+.... ..+...+...- .. ..
T Consensus 210 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~--~~l~~i~~~lg~p~~~~~~~~~~~ 287 (420)
T 1j1b_A 210 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV--DQLVEIIKVLGTPTREQIREMNPN 287 (420)
T ss_dssp TCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHCSCCHHHHHHHCSC
T ss_pred CCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCCHHHHHhhChh
Confidence 2 345678999999998764 7899999999999999999999999764311 11111111100 00 00
Q ss_pred cccccchhhhcCCCh-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 558 TAEVFDVELLKYQDV-----EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 558 ~~~~~d~~l~~~~~~-----~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
..+...+.. ..... .....++.+++.+||..||++|||+.|++++
T Consensus 288 ~~~~~~p~~-~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 288 YTEFKFPQI-KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp CCCCCCCCC-CCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhhccCcc-CCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 000000000 00000 1112457788889999999999999999873
No 237
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=3.8e-36 Score=313.43 Aligned_cols=251 Identities=19% Similarity=0.286 Sum_probs=189.2
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCCeeeeeeEEeeC-----CceEEEEe
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSK-----DEKLVVYS 410 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~-----~~~~lv~e 410 (627)
.+.||+|+||.||+|... +|+.||||++..... ....+.+|++++..+ +||||+++++++... ...++|+|
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~lv~e 94 (353)
T 2b9h_A 16 KSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF-KHENIITIFNIQRPDSFENFNEVYIIQE 94 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCSTTCCCEEEEEC
T ss_pred eeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhC-cCCCcCCeeeeecccccCccceEEEEEe
Confidence 478999999999999976 688999999864322 345678999999999 899999999988754 67899999
Q ss_pred cCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCC
Q 006886 411 YMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINF 490 (627)
Q Consensus 411 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~ 490 (627)
|+. |+|.+++... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 95 ~~~-~~L~~~~~~~------~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (353)
T 2b9h_A 95 LMQ-TDLHRVISTQ------MLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164 (353)
T ss_dssp CCS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred ccC-ccHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEeccccccccc
Confidence 997 6999998753 4899999999999999999999998 99999999999999999999999999987642
Q ss_pred C--------------CCCCCCccccCccccC-CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhh
Q 006886 491 P--------------TTATRTIGYRAPEVTE-TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVRE 555 (627)
Q Consensus 491 ~--------------~~~~~t~~y~aPE~~~-~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 555 (627)
. ....||+.|+|||++. +..++.++||||||+++|||++|+.||......+ ....+......
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~ 241 (353)
T 2b9h_A 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH---QLLLIFGIIGT 241 (353)
T ss_dssp ---------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCC
T ss_pred ccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH---HHHHHHHHhCC
Confidence 1 1235788999999875 4778999999999999999999999997643110 00000000000
Q ss_pred cc----cccccch-------hhhcCC--Ch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 556 EW----TAEVFDV-------ELLKYQ--DV----EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 556 ~~----~~~~~d~-------~l~~~~--~~----~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
.. ....... .+.... .. +....++.+++.+||..||++|||+.|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 242 PHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp CCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00 0000000 000000 00 1122456778889999999999999999873
No 238
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=9.2e-37 Score=318.19 Aligned_cols=247 Identities=22% Similarity=0.315 Sum_probs=187.5
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccccC---HHHHHHHHHHHHHhccCCCeeeeeeEEeeCCc------eEEE
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAAT---KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDE------KLVV 408 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~------~~lv 408 (627)
.+.||+|+||.||+|..+ +|+.||||++...... .+.+.+|+.++..+ +||||+++++++..... .++|
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~lv 107 (353)
T 3coi_A 29 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-QHENVIGLLDVFTPASSLRNFYDFYLV 107 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSGGGCCCCEEE
T ss_pred eeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhc-CCCCcccHhheEecccccccceeEEEE
Confidence 478999999999999975 6899999999754332 45688999999999 89999999999987654 4899
Q ss_pred EecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006886 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 409 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~ 488 (627)
|||++ |+|.+++.. .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 108 ~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 176 (353)
T 3coi_A 108 MPFMQ-TDLQKIMGL-------KFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHA 176 (353)
T ss_dssp EECCS-EEGGGTTTS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred ecccc-CCHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeecccccCC
Confidence 99997 588777642 3899999999999999999999998 999999999999999999999999999876
Q ss_pred CCC-CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhc------cccc
Q 006886 489 NFP-TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREE------WTAE 560 (627)
Q Consensus 489 ~~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 560 (627)
... ....+|+.|+|||++.+ ..++.++||||||+++|||++|+.||..... ......+.... ....
T Consensus 177 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~~~~~~i~~~~~~~~~~~~~~ 250 (353)
T 3coi_A 177 DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY------LDQLTQILKVTGVPGTEFVQK 250 (353)
T ss_dssp -------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCH------HHHHHHHHHHHCBCCHHHHTT
T ss_pred CCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHHHhCCCCHHHHHH
Confidence 543 33467899999999876 6789999999999999999999999975431 11111111100 0000
Q ss_pred ccch-------hh-----hc-CCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 561 VFDV-------EL-----LK-YQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 561 ~~d~-------~l-----~~-~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
..+. .+ .. ....+.....+.+++.+|+..||++|||+.|++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 251 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp CSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000 00 00 00011223466778889999999999999999874
No 239
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.4e-36 Score=311.62 Aligned_cols=249 Identities=22% Similarity=0.307 Sum_probs=172.3
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc--CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA--TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAG 415 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g 415 (627)
.+.||+|+||.||+|..+ +++.||||++..... ...++..|+..+.+..+||||+++++++...+..++||||+++
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~- 105 (327)
T 3aln_A 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST- 105 (327)
T ss_dssp -CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-
T ss_pred hheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-
Confidence 478999999999999975 689999999975432 2345566666444444999999999999999999999999975
Q ss_pred CHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC---
Q 006886 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE-GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP--- 491 (627)
Q Consensus 416 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~--- 491 (627)
+|.+++..........+++..+..++.|++.||.|||+. + |+||||||+||+++.++.+||+|||+++.....
T Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 182 (327)
T 3aln_A 106 SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK 182 (327)
T ss_dssp EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC-------
T ss_pred ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceeccccccc
Confidence 888877643222235689999999999999999999998 8 999999999999999999999999999876433
Q ss_pred CCCCCCccccCcccc----CCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhh
Q 006886 492 TTATRTIGYRAPEVT----ETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELL 567 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~----~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 567 (627)
....+|+.|+|||++ .+..++.++||||||+++|||++|+.||........ ........ .. +.+.
T Consensus 183 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-----~~~~~~~~-~~-----~~~~ 251 (327)
T 3aln_A 183 TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD-----QLTQVVKG-DP-----PQLS 251 (327)
T ss_dssp -----------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------CCCCCS-CC-----CCCC
T ss_pred ccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH-----HHHHHhcC-CC-----CCCC
Confidence 223578899999998 456789999999999999999999999975321100 00000000 00 0000
Q ss_pred cCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 568 KYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 568 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
..........+.+++.+||..||++|||+.|++++
T Consensus 252 -~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 252 -NSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp -CCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred -CcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 00001122356778889999999999999999874
No 240
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=9.7e-37 Score=313.52 Aligned_cols=233 Identities=21% Similarity=0.372 Sum_probs=190.2
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc-------CHHHHHHHHHHHHHhc-cCCCeeeeeeEEeeCCceEEEE
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA-------TKREFEQQMEVVGTIG-KHSNVVPVRAYYYSKDEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-------~~~~~~~e~~~l~~l~-~h~niv~l~~~~~~~~~~~lv~ 409 (627)
.+.||+|+||.||+|... +++.||||++..... ..+.+..|++++.++. .|+||+++++++...+..++|+
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~ 127 (320)
T 3a99_A 48 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLIL 127 (320)
T ss_dssp EEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEE
Confidence 478999999999999864 688999999875432 2245778999999995 3799999999999999999999
Q ss_pred ecCCC-CCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEec-CCCCeEEeecccccc
Q 006886 410 SYMPA-GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLT-QDLNGCISDVGLAHL 487 (627)
Q Consensus 410 e~~~~-g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~-~~~~~ki~DfG~a~~ 487 (627)
|++.+ ++|.+++... ..+++..++.++.|++.||.|||+.+ |+||||||+|||++ +++.+||+|||+++.
T Consensus 128 e~~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~ 199 (320)
T 3a99_A 128 ERPEPVQDLFDFITER-----GALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 199 (320)
T ss_dssp ECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EcCCCCccHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEEEeeCccccc
Confidence 99976 8999999864 35899999999999999999999998 99999999999999 789999999999987
Q ss_pred cCCC--CCCCCCccccCccccCCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccch
Q 006886 488 INFP--TTATRTIGYRAPEVTETRKA-SQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDV 564 (627)
Q Consensus 488 ~~~~--~~~~~t~~y~aPE~~~~~~~-~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 564 (627)
.... ....+|+.|+|||++.+..+ +.++||||||+++|||++|+.||.... ....... .+
T Consensus 200 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------------~~~~~~~---~~-- 262 (320)
T 3a99_A 200 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------------EIIRGQV---FF-- 262 (320)
T ss_dssp CCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------HHHHCCC---CC--
T ss_pred cccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------------hhhcccc---cc--
Confidence 6543 23458899999999876665 688999999999999999999996421 0111100 00
Q ss_pred hhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 565 ELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 565 ~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
....+ .++.+++.+||+.||++|||+.|++++
T Consensus 263 ----~~~~~---~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 263 ----RQRVS---SECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp ----SSCCC---HHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ----cccCC---HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01112 346678889999999999999999873
No 241
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=6.1e-36 Score=307.03 Aligned_cols=242 Identities=19% Similarity=0.303 Sum_probs=171.5
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccccC--HHHHHHHH-HHHHHhccCCCeeeeeeEEeeCCceEEEEecCCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAAT--KREFEQQM-EVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPA 414 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~e~-~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~ 414 (627)
.+.||+|+||.||+|..+ +|+.||||++...... ..++..|. .++..+ +||||+++++++...+..++||||+ +
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~-~ 107 (318)
T 2dyl_A 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSH-DCPYIVQCFGTFITNTDVFIAMELM-G 107 (318)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTT-TCTTBCCEEEEEECSSEEEEEECCC-S
T ss_pred cceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhc-CCCceeeEEEEEecCCcEEEEEecc-C
Confidence 478999999999999975 6899999999754322 22333344 445555 9999999999999999999999999 5
Q ss_pred CCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCCeEecCCCCeEEeecccccccCCC--
Q 006886 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE-GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 415 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~-- 491 (627)
+.+..+.... ...+++..+..++.|++.||.|||+. + |+||||||+||+++.++.+||+|||++......
T Consensus 108 ~~~~~l~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (318)
T 2dyl_A 108 TCAEKLKKRM----QGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA 180 (318)
T ss_dssp EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred CcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc
Confidence 5565555432 23589999999999999999999995 7 999999999999999999999999999766432
Q ss_pred -CCCCCCccccCccccC-----CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchh
Q 006886 492 -TTATRTIGYRAPEVTE-----TRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVE 565 (627)
Q Consensus 492 -~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 565 (627)
....+++.|+|||++. ...++.++||||||+++|||++|+.||..... ...............
T Consensus 181 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~~------ 249 (318)
T 2dyl_A 181 KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT-----DFEVLTKVLQEEPPL------ 249 (318)
T ss_dssp ------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHHHHHHSCCCC------
T ss_pred ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc-----cHHHHHHHhccCCCC------
Confidence 2345789999999984 45788999999999999999999999975321 122222222221110
Q ss_pred hhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 566 LLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 566 l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
....... ..++.+++.+||+.||.+||++.|++++
T Consensus 250 ~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 250 LPGHMGF---SGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp CCSSSCC---CHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CCccCCC---CHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0001111 2346678889999999999999999873
No 242
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=5.7e-36 Score=307.34 Aligned_cols=248 Identities=19% Similarity=0.275 Sum_probs=182.5
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCCeeeeeeEEe--------------eC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYY--------------SK 402 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~--------------~~ 402 (627)
.+.||+|+||.||+|... +++.||+|++.... ...+.+.+|++++..+ +||||+++++++. ..
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~~~~~~~ 94 (320)
T 2i6l_A 16 LKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRL-DHDNIVKVFEILGPSGSQLTDDVGSLTEL 94 (320)
T ss_dssp EEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECTTSCBCCC----CCSC
T ss_pred EEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhc-CCCCeeEEEEecccccccccccccccccc
Confidence 478999999999999976 48999999986543 2346788999999999 9999999999874 34
Q ss_pred CceEEEEecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEec-CCCCeEEee
Q 006886 403 DEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLT-QDLNGCISD 481 (627)
Q Consensus 403 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~-~~~~~ki~D 481 (627)
...++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++ +++.+||+|
T Consensus 95 ~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~D 164 (320)
T 2i6l_A 95 NSVYIVQEYME-TDLANVLEQ------GPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGD 164 (320)
T ss_dssp SEEEEEEECCS-EEHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTEEEECC
T ss_pred CceeEEeeccC-CCHHHHhhc------CCccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCeEEEcc
Confidence 57789999997 699999864 25899999999999999999999998 99999999999997 567999999
Q ss_pred cccccccCCC-------CCCCCCccccCccccCC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHh
Q 006886 482 VGLAHLINFP-------TTATRTIGYRAPEVTET-RKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVV 553 (627)
Q Consensus 482 fG~a~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 553 (627)
||+++..... ....++..|+|||++.+ ..++.++||||||+++|||++|+.||..... ......+.
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~~~~~~~~ 238 (320)
T 2i6l_A 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE------LEQMQLIL 238 (320)
T ss_dssp CTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHH
T ss_pred CccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCH------HHHHHHHH
Confidence 9999876432 22335788999998754 6789999999999999999999999975431 11111111
Q ss_pred hhccc-------------ccccchhhhcCC-Ch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 554 REEWT-------------AEVFDVELLKYQ-DV----EEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 554 ~~~~~-------------~~~~d~~l~~~~-~~----~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
..... ............ .. .....++.+++.+||+.||++|||+.|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 239 ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 11000 000000000000 00 0123456788889999999999999999873
No 243
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.3e-36 Score=320.84 Aligned_cols=239 Identities=20% Similarity=0.301 Sum_probs=180.0
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCCHH
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 418 (627)
.+.||+|+||+||.....+++.||||++..... ..+.+|++++..+.+||||+++++++.+....++||||++ |+|.
T Consensus 29 ~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~--~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~ 105 (432)
T 3p23_A 29 KDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF--SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQ 105 (432)
T ss_dssp EEEEEECGGGCEEEEEESSSSEEEEEEECTTTE--EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEHH
T ss_pred CCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH--HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCHH
Confidence 478999999997665566799999999865322 2356789999998789999999999999999999999996 6999
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC-----CCCeEEeecccccccCCC--
Q 006886 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ-----DLNGCISDVGLAHLINFP-- 491 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~-----~~~~ki~DfG~a~~~~~~-- 491 (627)
+++..... ...+..++.++.|++.||.|||+.+ |+||||||+|||++. ...+||+|||+++.....
T Consensus 106 ~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~ 178 (432)
T 3p23_A 106 EYVEQKDF----AHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178 (432)
T ss_dssp HHHHSSSC----CCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred HHHHhcCC----CccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence 99986532 2444456789999999999999998 999999999999953 346789999999876432
Q ss_pred -----CCCCCCccccCccccC---CCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006886 492 -----TTATRTIGYRAPEVTE---TRKASQKSDVYSFGVLLLEMLT-GKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 492 -----~~~~~t~~y~aPE~~~---~~~~~~~~Dv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
....||+.|+|||++. ...++.++|||||||++|||++ |..||...... ...... ........
T Consensus 179 ~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~-------~~~~~~-~~~~~~~~ 250 (432)
T 3p23_A 179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR-------QANILL-GACSLDCL 250 (432)
T ss_dssp -------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH-------HHHHHT-TCCCCTTS
T ss_pred ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH-------HHHHHh-ccCCcccc
Confidence 2345899999999997 4567889999999999999999 99998643211 111111 11111110
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006886 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~ 602 (627)
. ........+.+++.+||+.||++|||+.|+++
T Consensus 251 ~-------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 251 H-------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp C-------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred C-------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 0 11122334667888999999999999999985
No 244
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.2e-36 Score=308.50 Aligned_cols=233 Identities=21% Similarity=0.365 Sum_probs=184.4
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEeccccc-------CHHHHHHHHHHHHHhc---cCCCeeeeeeEEeeCCceEE
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAA-------TKREFEQQMEVVGTIG---KHSNVVPVRAYYYSKDEKLV 407 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-------~~~~~~~e~~~l~~l~---~h~niv~l~~~~~~~~~~~l 407 (627)
.+.||+|+||.||+|+.. +++.||||++..... ....+.+|++++.++. +|+||+++++++...+..++
T Consensus 36 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~ 115 (312)
T 2iwi_A 36 GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFML 115 (312)
T ss_dssp EEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEE
T ss_pred eeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEE
Confidence 478999999999999864 688999999865432 2234567888888885 79999999999999999999
Q ss_pred EEec-CCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEec-CCCCeEEeecccc
Q 006886 408 VYSY-MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLT-QDLNGCISDVGLA 485 (627)
Q Consensus 408 v~e~-~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~-~~~~~ki~DfG~a 485 (627)
|+|| +.+++|.+++... ..+++..++.++.|++.||.|||+.+ |+||||||+||+++ .++.+||+|||++
T Consensus 116 v~e~~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~dfg~~ 187 (312)
T 2iwi_A 116 VLERPLPAQDLFDYITEK-----GPLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSG 187 (312)
T ss_dssp EEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTTEEEECCCSSC
T ss_pred EEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCCeEEEEEcchh
Confidence 9999 7899999999864 25899999999999999999999998 99999999999999 8899999999999
Q ss_pred cccCCC--CCCCCCccccCccccCCCCCC-CcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhccccccc
Q 006886 486 HLINFP--TTATRTIGYRAPEVTETRKAS-QKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVF 562 (627)
Q Consensus 486 ~~~~~~--~~~~~t~~y~aPE~~~~~~~~-~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (627)
+..... ....++..|+|||++.+..+. .++||||||+++|||++|+.||.... ...... . .+
T Consensus 188 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------------~~~~~~-~--~~ 252 (312)
T 2iwi_A 188 ALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------------EILEAE-L--HF 252 (312)
T ss_dssp EECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------HHHHTC-C--CC
T ss_pred hhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------------HHhhhc-c--CC
Confidence 876543 334578999999998766654 58999999999999999999996421 011100 0 00
Q ss_pred chhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 006886 563 DVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVRM 603 (627)
Q Consensus 563 d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~ 603 (627)
... ....+.+++.+||+.+|++|||+.|++++
T Consensus 253 ------~~~---~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 253 ------PAH---VSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp ------CTT---SCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ------ccc---CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011 12356678889999999999999999874
No 245
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=7.4e-35 Score=294.29 Aligned_cols=230 Identities=15% Similarity=0.118 Sum_probs=177.7
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccccC----HHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCC
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVAAT----KREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMP 413 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~----~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~ 413 (627)
.+.||+|+||.||+|+.. +++.||||++...... .+.+.+|++.+..+ +||||+++++++...+..++||||++
T Consensus 36 ~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 114 (286)
T 3uqc_A 36 LIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRI-DKPGVARVLDVVHTRAGGLVVAEWIR 114 (286)
T ss_dssp EEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred EEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcC-CCCCcceeeEEEEECCcEEEEEEecC
Confidence 378999999999999976 4899999999765332 36788999999999 99999999999999999999999999
Q ss_pred CCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCC
Q 006886 414 AGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTT 493 (627)
Q Consensus 414 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~~~ 493 (627)
+++|.+++... ....++.+++.|++.||.|||+++ |+||||||+|||++.++.+||+++|
T Consensus 115 g~~L~~~l~~~-------~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~---------- 174 (286)
T 3uqc_A 115 GGSLQEVADTS-------PSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPA---------- 174 (286)
T ss_dssp EEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCC----------
T ss_pred CCCHHHHHhcC-------CChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEecc----------
Confidence 99999999532 345578899999999999999998 9999999999999999999998543
Q ss_pred CCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChH
Q 006886 494 ATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVE 573 (627)
Q Consensus 494 ~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 573 (627)
|++ .++.++||||||+++|||++|+.||........... ...........+. ......+
T Consensus 175 ------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~ 233 (286)
T 3uqc_A 175 ------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP-------AERDTAGQPIEPA-DIDRDIP 233 (286)
T ss_dssp ------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE-------CCBCTTSCBCCHH-HHCTTSC
T ss_pred ------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH-------HHHHhccCCCChh-hcccCCC
Confidence 443 378999999999999999999999986543321100 0000000000000 0011122
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHhhccccccc
Q 006886 574 EEMVQMLQIALSCVAKVPDSRPKMDDVVRMIEQIQQPELRN 614 (627)
Q Consensus 574 ~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L~~~~~~~~~~ 614 (627)
.++.+++.+||+.||++| |+.|+++.|+++.......
T Consensus 234 ---~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~~~ 270 (286)
T 3uqc_A 234 ---FQISAVAARSVQGDGGIR-SASTLLNLMQQATAVADRT 270 (286)
T ss_dssp ---HHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-----
T ss_pred ---HHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCCcc
Confidence 346678889999999999 9999999999988765543
No 246
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=9.6e-36 Score=328.29 Aligned_cols=267 Identities=21% Similarity=0.299 Sum_probs=200.7
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCCeeeeeeEEee------CCceEEEE
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYS------KDEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~------~~~~~lv~ 409 (627)
.+.||+|+||.||+|... +|+.||||++.... ...+.+.+|++++.++ +||||+++++++.. .+..++||
T Consensus 19 ~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~v~~~~~~~~~~~~~~LVm 97 (676)
T 3qa8_A 19 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL-NHPNVVSAREVPDGLQKLAPNDLPLLAM 97 (676)
T ss_dssp CCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHC-CBTTBCCEEECCTTTCCCCTTSSCCCEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhC-CCCCCCceeeeecccccccCCCeEEEEE
Confidence 478999999999999964 68999999987542 2346788999999999 99999999998765 66779999
Q ss_pred ecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCC---eEEeeccccc
Q 006886 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLN---GCISDVGLAH 486 (627)
Q Consensus 410 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~---~ki~DfG~a~ 486 (627)
||+++|+|.+++..... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++. +||+|||++.
T Consensus 98 Ey~~ggsL~~~L~~~~~--~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~DFG~a~ 172 (676)
T 3qa8_A 98 EYCEGGDLRKYLNQFEN--CCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK 172 (676)
T ss_dssp ECCSSCBHHHHHHSSSC--TTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECSCCCCC
T ss_pred EeCCCCCHHHHHHhccc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEccccccc
Confidence 99999999999986432 235888999999999999999999998 999999999999997765 8999999998
Q ss_pred ccCCC---CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhh---------
Q 006886 487 LINFP---TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVR--------- 554 (627)
Q Consensus 487 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--------- 554 (627)
..... ....+|+.|+|||++.+..++.++||||||+++|||++|+.||..... ...|......
T Consensus 173 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-----~~~~~~~i~~~~~~~~~~~ 247 (676)
T 3qa8_A 173 ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ-----PVQWHGKVREKSNEHIVVY 247 (676)
T ss_dssp BTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH-----HHHSSTTCC------CCSC
T ss_pred ccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc-----hhhhhhhhhcccchhhhhh
Confidence 76543 234678999999999999999999999999999999999999965310 0011000000
Q ss_pred hccccc-ccchhhhcC-CChHHHHHHHHHHHHHcccCCCCCCCCHHH-----HHHHHHhhcccccccCC
Q 006886 555 EEWTAE-VFDVELLKY-QDVEEEMVQMLQIALSCVAKVPDSRPKMDD-----VVRMIEQIQQPELRNRA 616 (627)
Q Consensus 555 ~~~~~~-~~d~~l~~~-~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~e-----v~~~L~~~~~~~~~~~~ 616 (627)
+..... .+....... .........+.+++.+|+..||++|||+.| ..+.++.+....+....
T Consensus 248 ~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~kil~~f 316 (676)
T 3qa8_A 248 DDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLKLLSVM 316 (676)
T ss_dssp CCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCCCEEECC
T ss_pred hhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhccccccc
Confidence 000000 000000000 011224456778888999999999999988 56778887776654433
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2e-35 Score=334.33 Aligned_cols=233 Identities=18% Similarity=0.265 Sum_probs=188.6
Q ss_pred hcccCcCCceeEEEEEec--CCcEEEEEEecccc--cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCc-----eEEEE
Q 006886 339 AEVLGKGSYGSTYKAILE--DGTTVVVKRLREVA--ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDE-----KLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~--~~~~vavK~l~~~~--~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~-----~~lv~ 409 (627)
.+.||+|+||.||++++. +++.||||++.... ...+.+.+|++++..+ +||||+++++++...+. .++||
T Consensus 85 ~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~~~~~~lv~ 163 (681)
T 2pzi_A 85 KGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEV-VHPSIVQIFNFVEHTDRHGDPVGYIVM 163 (681)
T ss_dssp EEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEEECTTSCEEEEEEE
T ss_pred EEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhc-CCCCcCeEeeeEeecCCCCCceeEEEE
Confidence 478999999999999975 58999999986532 2345688999999999 89999999999987665 69999
Q ss_pred ecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006886 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||+++++|.+++.. .+++..++.++.|++.||.|||+++ |+||||||+|||++.+ .+||+|||+++...
T Consensus 164 E~~~g~~L~~~~~~-------~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~a~~~~ 232 (681)
T 2pzi_A 164 EYVGGQSLKRSKGQ-------KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAVSRIN 232 (681)
T ss_dssp ECCCCEECC----C-------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTTCEETT
T ss_pred EeCCCCcHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEecccchhcc
Confidence 99999999887653 4899999999999999999999998 9999999999999986 89999999999887
Q ss_pred CCCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcC
Q 006886 490 FPTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKY 569 (627)
Q Consensus 490 ~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 569 (627)
......||++|+|||++.+. ++.++|||||||++|||++|..||.......... .
T Consensus 233 ~~~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~~------------------------~ 287 (681)
T 2pzi_A 233 SFGYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPE------------------------D 287 (681)
T ss_dssp CCSCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSCCT------------------------T
T ss_pred cCCccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccccc------------------------c
Confidence 76677799999999998764 4899999999999999999998886432111100 0
Q ss_pred CChHHHHHHHHHHHHHcccCCCCCCCC-HHHHHHHHHhhc
Q 006886 570 QDVEEEMVQMLQIALSCVAKVPDSRPK-MDDVVRMIEQIQ 608 (627)
Q Consensus 570 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs-~~ev~~~L~~~~ 608 (627)
.........+.+++.+||+.||++||+ ++++...|..+.
T Consensus 288 ~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 288 DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp CHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred ccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 000112245678889999999999995 666666666653
No 248
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=2.1e-34 Score=293.23 Aligned_cols=227 Identities=17% Similarity=0.281 Sum_probs=175.1
Q ss_pred cccCcCCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEee----CCceEEEEecCCC
Q 006886 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYS----KDEKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~----~~~~~lv~e~~~~ 414 (627)
+.||+|+||.||++... +++.||+|+++. ...+.+|++++.++.+||||+++++++.. ....++||||+++
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~ 99 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 99 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCS
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEecc----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCC
Confidence 67999999999999964 689999999864 34577888888777699999999999887 6678999999999
Q ss_pred CCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecC---CCCeEEeecccccccCCC
Q 006886 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQ---DLNGCISDVGLAHLINFP 491 (627)
Q Consensus 415 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~---~~~~ki~DfG~a~~~~~~ 491 (627)
|+|.+++.... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++. ++.+||+|||++....
T Consensus 100 ~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-- 171 (299)
T 3m2w_A 100 GELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-- 171 (299)
T ss_dssp CBHHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECT--
T ss_pred CcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEeccccccccc--
Confidence 99999998643 246899999999999999999999998 999999999999998 7899999999986543
Q ss_pred CCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCC
Q 006886 492 TTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQD 571 (627)
Q Consensus 492 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 571 (627)
+..++.++||||||+++|||++|+.||.......... ..................
T Consensus 172 ----------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~-- 226 (299)
T 3m2w_A 172 ----------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP-------GMKTRIRMGQYEFPNPEW-- 226 (299)
T ss_dssp ----------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------C-------CSCCSSCTTCCSSCHHHH--
T ss_pred ----------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhH-------HHHHHHhhccccCCchhc--
Confidence 2457889999999999999999999997543221100 000000000000000000
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 006886 572 VEEEMVQMLQIALSCVAKVPDSRPKMDDVVRMI 604 (627)
Q Consensus 572 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~~L 604 (627)
.....++.+++.+||+.||++|||+.|++++-
T Consensus 227 -~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp 258 (299)
T 3m2w_A 227 -SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 258 (299)
T ss_dssp -TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred -ccCCHHHHHHHHHHcccChhhCCCHHHHhcCh
Confidence 11234567788899999999999999999853
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.6e-35 Score=313.43 Aligned_cols=236 Identities=12% Similarity=0.123 Sum_probs=173.4
Q ss_pred hcccCcCCceeEEEEEec-CCcEEEEEEecccc----cCHHHHHHHHHHHHHhccC-CCeeee---------e-------
Q 006886 339 AEVLGKGSYGSTYKAILE-DGTTVVVKRLREVA----ATKREFEQQMEVVGTIGKH-SNVVPV---------R------- 396 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~e~~~l~~l~~h-~niv~l---------~------- 396 (627)
.+.||+|+||.||+|.+. +|+.||||++.... ...+.+.+|+.++..+ .| +|.... .
T Consensus 83 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (413)
T 3dzo_A 83 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLL-RGIKNQKQAKVHLRFIFPFDLVKDPQ 161 (413)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGS-TTCCSHHHHHHHTCBCCCCEEEECCC
T ss_pred ecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhh-ccCCCHHHHHHhcccccchhhcccCC
Confidence 368999999999999954 68999999987332 2346788999888888 44 322111 1
Q ss_pred -----eEEee-----CCceEEEEecCCCCCHHHHhhhcC--CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC
Q 006886 397 -----AYYYS-----KDEKLVVYSYMPAGSLFMLLHRNR--SDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNI 464 (627)
Q Consensus 397 -----~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dl 464 (627)
.++.. ....+++|+++ +|+|.+++.... ......+++..++.++.|++.||.|||+++ |+||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---iiHrDi 237 (413)
T 3dzo_A 162 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYL 237 (413)
T ss_dssp ---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EECSCC
T ss_pred CCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCc
Confidence 11111 12346666665 689999885321 112346889999999999999999999998 999999
Q ss_pred CCCCeEecCCCCeEEeecccccccCCC-CCCCCCccccCcccc----------CCCCCCCcchhHHHHHHHHHHHhCCCC
Q 006886 465 KSSNVLLTQDLNGCISDVGLAHLINFP-TTATRTIGYRAPEVT----------ETRKASQKSDVYSFGVLLLEMLTGKAP 533 (627)
Q Consensus 465 k~~NILl~~~~~~ki~DfG~a~~~~~~-~~~~~t~~y~aPE~~----------~~~~~~~~~Dv~S~Gvvl~el~tg~~p 533 (627)
||+|||++.++.+||+|||+++..... ....| +.|+|||++ .+..++.++|||||||++|||++|+.|
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~P 316 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLP 316 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCC
T ss_pred ccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCC
Confidence 999999999999999999998876543 33456 999999998 566688999999999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 006886 534 LQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCVAKVPDSRPKMDDVVR 602 (627)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev~~ 602 (627)
|......... +..+......+ ..+.+++.+||+.||++||++.|+++
T Consensus 317 f~~~~~~~~~-------------------~~~~~~~~~~~---~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 317 NTDDAALGGS-------------------EWIFRSCKNIP---QPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp CCTTGGGSCS-------------------GGGGSSCCCCC---HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCcchhhhH-------------------HHHHhhcccCC---HHHHHHHHHHccCChhhCcCHHHHHh
Confidence 9754322111 11111111222 35667888999999999999877754
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=2.7e-34 Score=297.35 Aligned_cols=238 Identities=14% Similarity=0.164 Sum_probs=178.9
Q ss_pred HHhcccCcCCceeEEEEEecCCcEEEEEEecccc---------cCHHHHHHHHHHHHHhc--------cCCCeeeeeeEE
Q 006886 337 ASAEVLGKGSYGSTYKAILEDGTTVVVKRLREVA---------ATKREFEQQMEVVGTIG--------KHSNVVPVRAYY 399 (627)
Q Consensus 337 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~---------~~~~~~~~e~~~l~~l~--------~h~niv~l~~~~ 399 (627)
...+.||+|+||+||+|+. +|+.||||++.... ...+.+.+|+++++.+. .||||+++.+.+
T Consensus 23 ~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~ 101 (336)
T 2vuw_A 23 QRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVH 101 (336)
T ss_dssp HTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEE
T ss_pred hheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhccee
Confidence 3468999999999999998 58999999997542 13478999999999885 477777766654
Q ss_pred e-----------------e-------------CCceEEEEecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHH
Q 006886 400 Y-----------------S-------------KDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA 449 (627)
Q Consensus 400 ~-----------------~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~ 449 (627)
. + .+..++||||+++|++.+.+.+ ..+++..+..++.|++.||.
T Consensus 102 ~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 102 CVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHHHHHHHHH
T ss_pred EecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHHHHHHHHH
Confidence 2 2 6789999999999987666643 34899999999999999999
Q ss_pred HHH-hcCCCCeeecCCCCCCeEecCCC--------------------CeEEeecccccccCCCCCCCCCccccCccccCC
Q 006886 450 FIH-SEGGAKFTHGNIKSSNVLLTQDL--------------------NGCISDVGLAHLINFPTTATRTIGYRAPEVTET 508 (627)
Q Consensus 450 ~LH-~~~~~~ivH~Dlk~~NILl~~~~--------------------~~ki~DfG~a~~~~~~~~~~~t~~y~aPE~~~~ 508 (627)
||| +.+ |+||||||+|||++.++ .+||+|||+|+..... ...||+.|+|||++.+
T Consensus 176 ~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-~~~gt~~y~aPE~~~g 251 (336)
T 2vuw_A 176 VAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-IVVFCDVSMDEDLFTG 251 (336)
T ss_dssp HHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-EEECCCCTTCSGGGCC
T ss_pred HHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-cEEEeecccChhhhcC
Confidence 999 888 99999999999999887 8999999999877543 4478999999999987
Q ss_pred CCCCCcchhHHHHHH-HHHHHhCCCCCCCCCCCCCCCHHHHHHHHhhhcccccccchhhhcCCChHHHHHHHHHHHHHcc
Q 006886 509 RKASQKSDVYSFGVL-LLEMLTGKAPLQHSGHDDVVDLPRWVRSVVREEWTAEVFDVELLKYQDVEEEMVQMLQIALSCV 587 (627)
Q Consensus 509 ~~~~~~~Dv~S~Gvv-l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~l~~l~~~Cl 587 (627)
.. +.++||||++++ .+++++|..||.. ..|................ ............++.+++.+||
T Consensus 252 ~~-~~~~Diwsl~~~~~~~~~~g~~p~~~---------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~dli~~~L 320 (336)
T 2vuw_A 252 DG-DYQFDIYRLMKKENNNRWGEYHPYSN---------VLWLHYLTDKMLKQMTFKT-KCNTPAMKQIKRKIQEFHRTML 320 (336)
T ss_dssp CS-SHHHHHHHHHHHHHTTCTTSCCTHHH---------HHHHHHHHHHHHHTCCCSS-CCCSHHHHHHHHHHHHHHHHGG
T ss_pred CC-ccceehhhhhCCCCcccccccCCCcc---------hhhhhHHHHhhhhhhccCc-ccchhhhhhcCHHHHHHHHHHh
Confidence 66 899999998777 7778889988842 1121111110000000000 0001112345567888999999
Q ss_pred cCCCCCCCCHHHHH
Q 006886 588 AKVPDSRPKMDDVV 601 (627)
Q Consensus 588 ~~~p~~RPs~~ev~ 601 (627)
+.| |++|++
T Consensus 321 ~~d-----sa~e~l 329 (336)
T 2vuw_A 321 NFS-----SATDLL 329 (336)
T ss_dssp GSS-----SHHHHH
T ss_pred ccC-----CHHHHH
Confidence 976 999987
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=4.5e-29 Score=274.69 Aligned_cols=181 Identities=15% Similarity=0.069 Sum_probs=127.8
Q ss_pred ccCcCCceeEEEEE-ecCCcEEEEEEecccc-----------cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEE
Q 006886 341 VLGKGSYGSTYKAI-LEDGTTVVVKRLREVA-----------ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVV 408 (627)
Q Consensus 341 ~lg~G~~g~Vy~~~-~~~~~~vavK~l~~~~-----------~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv 408 (627)
..+.|++|.+..++ .--|+.+++|.+.... ...++|.+|++++.++..|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 35666666666554 2247889999986431 12357999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006886 409 YSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 409 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~ 488 (627)
|||++|++|.+++... .+++.. +|+.||+.||+|+|++| ||||||||+|||+++++.+||+|||+|+..
T Consensus 321 MEyv~G~~L~d~i~~~-----~~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~ 389 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAG-----EEIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTT 389 (569)
T ss_dssp EECCCSEEHHHHHHTT-----CCCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred EecCCCCcHHHHHHhC-----CCCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeC
Confidence 9999999999999864 245543 58999999999999999 999999999999999999999999999877
Q ss_pred CCCC----CCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCC
Q 006886 489 NFPT----TATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAP 533 (627)
Q Consensus 489 ~~~~----~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p 533 (627)
.... +..||++|||||++.+ .+..++|+||+|++++++.++..+
T Consensus 390 ~~~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 390 PQDCSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp C---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCCCccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 5432 2347899999999976 567889999999998877655433
No 252
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.93 E-value=1.7e-26 Score=236.10 Aligned_cols=189 Identities=32% Similarity=0.638 Sum_probs=166.7
Q ss_pred cCChhHHHHHHHHHhhCCCC-CCCCCCCCCCCCCC--CcceEeeCCC--CcEEEEEcCCCCccc--ccCccccCCCCccc
Q 006886 25 ADLNSDKQALLDFADAVPHA-RKLNWNAAAPVCSS--WIGVTCNVNR--SRVIGIHLPGIGFTG--PIPANSIGKLDALK 97 (627)
Q Consensus 25 ~~~~~~~~~l~~~~~~~~~~-~~~~W~~~~~~c~~--w~gv~C~~~~--~~v~~l~l~~~~l~~--~~~~~~l~~l~~L~ 97 (627)
.|.+.|..||++||+++..+ ...+|+.+.++| . |.||+|+... ++|+.|+|++|+++| .+|. .|.++++|+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C-~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~-~l~~l~~L~ 79 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCC-NRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPS-SLANLPYLN 79 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTT-TTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCG-GGGGCTTCS
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCC-cCCCcceEeCCCCCCceEEEEECCCCCccCCcccCh-hHhCCCCCC
Confidence 46778999999999999544 345898766666 5 9999998654 799999999999999 8998 899999999
Q ss_pred EEEccC-cccCccCCCCCCCcccccEEeeecccccccCchh-hc-cccccccccccccccCCccccccccccccccccCC
Q 006886 98 ILSLRS-NYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAF-RS-LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNN 174 (627)
Q Consensus 98 ~L~L~~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N 174 (627)
.|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|.. .. .+|++|+|++|.+++.+|..|.++++|++|++++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999995 9999999999999999999999999999888864 33 38999999999999999999999999999999999
Q ss_pred cccccCCCC--CCC-ccceeeccCCCccccCCCCCCCCCCCcccC
Q 006886 175 SISGAIPPL--NLP-RLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 175 ~l~~~~p~~--~~~-~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
++++.+|.. .++ +|+.|++++|++++.+|..+..++ |+.++
T Consensus 160 ~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~ 203 (313)
T 1ogq_A 160 RISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVD 203 (313)
T ss_dssp CCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEE
T ss_pred cccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEE
Confidence 999888864 676 999999999999999999888776 66554
No 253
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=8.4e-26 Score=247.26 Aligned_cols=177 Identities=16% Similarity=0.211 Sum_probs=144.6
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEeccccc---------CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEE
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAA---------TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVY 409 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~---------~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~ 409 (627)
.+.||+|+||.||++... ++.+++|+...... ..+.+.+|++++.++ +||||+++..++...+..++||
T Consensus 341 ~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALV-KDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp -------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHG-GGGTCCCCCEEEEETTTTEEEE
T ss_pred CCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhc-CCCCcCceEEEEEeCCccEEEE
Confidence 468999999999999654 78899998643211 134589999999999 9999997777777888889999
Q ss_pred ecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccC
Q 006886 410 SYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 410 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||+++|+|.+++.. +..++.|++.||.|||+++ |+||||||+|||++. .+||+|||+++...
T Consensus 419 E~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~~ 480 (540)
T 3en9_A 419 SYINGKLAKDVIED-------------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKISN 480 (540)
T ss_dssp ECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred ECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEECC
Confidence 99999999999874 4579999999999999998 999999999999999 99999999999875
Q ss_pred CC-----------CCCCCCccccCccccCC--CCCCCcchhHHHHHHHHHHHhCCCCCC
Q 006886 490 FP-----------TTATRTIGYRAPEVTET--RKASQKSDVYSFGVLLLEMLTGKAPLQ 535 (627)
Q Consensus 490 ~~-----------~~~~~t~~y~aPE~~~~--~~~~~~~Dv~S~Gvvl~el~tg~~p~~ 535 (627)
.. ....||+.|+|||++.. ..|+..+|+|+..+-..+-+.++.+|.
T Consensus 481 ~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 481 LDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred CccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 42 13457899999999976 568888999999999999888877764
No 254
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.90 E-value=4.4e-24 Score=244.85 Aligned_cols=192 Identities=24% Similarity=0.358 Sum_probs=153.0
Q ss_pred cccccCChhHHHHHHHHHhhCCCC-CCCCCCCCCCCCCCCcceEeeCCCCcEEEEEcCCCCcccc---cCc---------
Q 006886 21 PTVVADLNSDKQALLDFADAVPHA-RKLNWNAAAPVCSSWIGVTCNVNRSRVIGIHLPGIGFTGP---IPA--------- 87 (627)
Q Consensus 21 ~~~~~~~~~~~~~l~~~~~~~~~~-~~~~W~~~~~~c~~w~gv~C~~~~~~v~~l~l~~~~l~~~---~~~--------- 87 (627)
+++..+.+.|++||++||+++.++ ...+|+.+++|| .|.||+|+ .++|+.|+|+++++.|. +|+
T Consensus 4 ~~~~~~~~~~~~all~~k~~~~~~~~l~~W~~~~~~C-~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~ 80 (768)
T 3rgz_A 4 ASPSQSLYREIHQLISFKDVLPDKNLLPDWSSNKNPC-TFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLE 80 (768)
T ss_dssp ----CCHHHHHHHHHHHHTTCSCTTSSTTCCTTSCGG-GSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCC
T ss_pred CccccCCHHHHHHHHHHHhhCCCcccccCCCCCCCCc-CCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCccc
Confidence 344455678999999999998543 455898555555 89999998 48999999999999987 543
Q ss_pred -------------cccCCCCcccEEEccCcccCccCCC--CCCCcccccEEeeecccccccCchhh--c-cccccccccc
Q 006886 88 -------------NSIGKLDALKILSLRSNYLNGTLPS--DITSISSLQYVYLQNNYFSGVLPAFR--S-LQLNALDLSF 149 (627)
Q Consensus 88 -------------~~l~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~~~~~--~-~~L~~L~ls~ 149 (627)
..|+++++|+.|+|++|.++|.+|. .|+++++|++|+|++|.+.+..|... . .+|++|+|++
T Consensus 81 ~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~ 160 (768)
T 3rgz_A 81 SLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSA 160 (768)
T ss_dssp EEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCS
T ss_pred ccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCC
Confidence 2688889999999999999988888 89999999999999999988877532 2 3789999999
Q ss_pred cccccCCccc---cccccccccccccCCcccccCCCCCCCccceeeccCCCccccCCCCCCCCCCCcccC
Q 006886 150 NAFTGNIPPG---FQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 150 N~l~~~~p~~---~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
|++++..|.. +.++++|++|++++|++++.+|...+++|++|++++|.+++.+|. ++++++|+.++
T Consensus 161 n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~ 229 (768)
T 3rgz_A 161 NSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLD 229 (768)
T ss_dssp SCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEE
T ss_pred CccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEE
Confidence 9998877776 778888888888888888777766788888888888888877776 77777776653
No 255
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.89 E-value=2.5e-24 Score=246.25 Aligned_cols=185 Identities=26% Similarity=0.435 Sum_probs=159.4
Q ss_pred CChhHHHHHHHHHhhCCCCCCCCCCCCC-----CC-CCCC------------cceEeeCCCCcEEEEEcCCCCcccccCc
Q 006886 26 DLNSDKQALLDFADAVPHARKLNWNAAA-----PV-CSSW------------IGVTCNVNRSRVIGIHLPGIGFTGPIPA 87 (627)
Q Consensus 26 ~~~~~~~~l~~~~~~~~~~~~~~W~~~~-----~~-c~~w------------~gv~C~~~~~~v~~l~l~~~~l~~~~~~ 87 (627)
+...|..||++||+++..+ +|+.++ ++ ||+| .||+|+. .++|+.|+|++|++.|.+|+
T Consensus 266 ~~~~d~~ALl~~k~~l~~~---~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G~ip~ 341 (876)
T 4ecn_A 266 EYIKDYKALKAIWEALDGK---NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKGRVPD 341 (876)
T ss_dssp HHHHHHHHHHHHHHHTTGG---GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEEEECG
T ss_pred cchHHHHHHHHHHHHcCCC---CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCCcCch
Confidence 3457999999999999544 787544 44 2589 9999986 58999999999999999998
Q ss_pred cccCCCCcccEEEc-cCcccCcc---------------------------------------------------------
Q 006886 88 NSIGKLDALKILSL-RSNYLNGT--------------------------------------------------------- 109 (627)
Q Consensus 88 ~~l~~l~~L~~L~L-~~N~l~~~--------------------------------------------------------- 109 (627)
.|++|++|+.|+| ++|.++|.
T Consensus 342 -~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~ 420 (876)
T 4ecn_A 342 -AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKD 420 (876)
T ss_dssp -GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCC
T ss_pred -HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccc
Confidence 8999999999999 77766554
Q ss_pred -------------------CCCCCCCcccccEEeeecccccc------------------cCchhh--c-cccccccccc
Q 006886 110 -------------------LPSDITSISSLQYVYLQNNYFSG------------------VLPAFR--S-LQLNALDLSF 149 (627)
Q Consensus 110 -------------------~p~~~~~l~~L~~L~l~~N~l~~------------------~~~~~~--~-~~L~~L~ls~ 149 (627)
+|..|++|++|++|+|++|+|++ +++.+. . .+|+.|+|++
T Consensus 421 ~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~ 500 (876)
T 4ecn_A 421 SRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYN 500 (876)
T ss_dssp CCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEES
T ss_pred cccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcC
Confidence 88889999999999999999999 444443 4 4899999999
Q ss_pred cccccCCccccccccccccccccCCc-ccc-cCCCC---------CCCccceeeccCCCccccCCC--CCCCCCCCcccC
Q 006886 150 NAFTGNIPPGFQNLTRLHLLNLQNNS-ISG-AIPPL---------NLPRLKILNFSNNNLNGSIPD--SLQTFPNSSFVG 216 (627)
Q Consensus 150 N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~-~~p~~---------~~~~L~~L~l~~N~l~~~~p~--~~~~~~~l~~~~ 216 (627)
|.+.+.+|..|+++++|+.|+|++|+ |+| .+|.. .+++|+.|+|++|.++ .+|. .+.++++|+.++
T Consensus 501 N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~ 579 (876)
T 4ecn_A 501 CPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLD 579 (876)
T ss_dssp CTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEE
T ss_pred CCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEE
Confidence 99999999999999999999999998 998 66642 4569999999999999 8998 899998888764
No 256
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.89 E-value=3.7e-24 Score=240.08 Aligned_cols=184 Identities=27% Similarity=0.454 Sum_probs=159.2
Q ss_pred hhHHHHHHHHHhhCCCCCC----------CCCCCCCCCCCCC---cceEeeCCCCcEEEEEcCCCCcccccCccccCCCC
Q 006886 28 NSDKQALLDFADAVPHARK----------LNWNAAAPVCSSW---IGVTCNVNRSRVIGIHLPGIGFTGPIPANSIGKLD 94 (627)
Q Consensus 28 ~~~~~~l~~~~~~~~~~~~----------~~W~~~~~~c~~w---~gv~C~~~~~~v~~l~l~~~~l~~~~~~~~l~~l~ 94 (627)
..|+.||.+|++++..... .+|+...++| .| .||+|+.. ++|+.|+|+++++.|.+|+ .|++|+
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c-~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~-~l~~L~ 105 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELD-MWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPD-AIGQLT 105 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGG-GTTCCTTEEECTT-CCEEEEECTTSCCEEEECG-GGGGCT
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcc-cccCCCCeEEcCC-CCEEEEEecCcccCCcCCh-HHhcCc
Confidence 4699999999999853321 2698665555 79 99999865 8999999999999999998 899999
Q ss_pred cccEEEccCc----------------------------------------------------------------------
Q 006886 95 ALKILSLRSN---------------------------------------------------------------------- 104 (627)
Q Consensus 95 ~L~~L~L~~N---------------------------------------------------------------------- 104 (627)
+|+.|+|++|
T Consensus 106 ~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~ 185 (636)
T 4eco_A 106 ELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKD 185 (636)
T ss_dssp TCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCT
T ss_pred cceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhh
Confidence 9999999998
Q ss_pred --------ccCccCCCCCCCcccccEEeeecccccc------------------cCchhh--c-cccccccccccccccC
Q 006886 105 --------YLNGTLPSDITSISSLQYVYLQNNYFSG------------------VLPAFR--S-LQLNALDLSFNAFTGN 155 (627)
Q Consensus 105 --------~l~~~~p~~~~~l~~L~~L~l~~N~l~~------------------~~~~~~--~-~~L~~L~ls~N~l~~~ 155 (627)
+|+| +|..|+++++|++|+|++|++++ +++.+. . .+|++|+|++|.+.|.
T Consensus 186 l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~ 264 (636)
T 4eco_A 186 TQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTK 264 (636)
T ss_dssp TTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSS
T ss_pred hhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCcc
Confidence 4455 88899999999999999999999 444555 4 3899999999999999
Q ss_pred CccccccccccccccccCCc-ccc-cCCCC--CC------CccceeeccCCCccccCCC--CCCCCCCCcccC
Q 006886 156 IPPGFQNLTRLHLLNLQNNS-ISG-AIPPL--NL------PRLKILNFSNNNLNGSIPD--SLQTFPNSSFVG 216 (627)
Q Consensus 156 ~p~~~~~l~~L~~L~l~~N~-l~~-~~p~~--~~------~~L~~L~l~~N~l~~~~p~--~~~~~~~l~~~~ 216 (627)
+|..|+++++|++|++++|+ ++| .+|.. .+ ++|+.|++++|+++ .+|. .++++++|+.++
T Consensus 265 ~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~ 336 (636)
T 4eco_A 265 LPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLE 336 (636)
T ss_dssp CCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEE
T ss_pred ChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEe
Confidence 99999999999999999998 998 77753 44 89999999999999 8998 899888888764
No 257
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.85 E-value=6.9e-22 Score=198.30 Aligned_cols=138 Identities=17% Similarity=0.193 Sum_probs=112.5
Q ss_pred cccCcCCceeEEEEEecCCcEEEEEEeccccc-------------------CHHHHHHHHHHHHHhccCCCeeeeeeEEe
Q 006886 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAA-------------------TKREFEQQMEVVGTIGKHSNVVPVRAYYY 400 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~-------------------~~~~~~~e~~~l~~l~~h~niv~l~~~~~ 400 (627)
+.||+|+||.||+|...+|+.||+|.++.... ....+.+|++++.++. | +++.+++.
T Consensus 96 ~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~---~-~~v~~~~~ 171 (282)
T 1zar_A 96 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ---G-LAVPKVYA 171 (282)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT---T-SSSCCEEE
T ss_pred CEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc---C-CCcCeEEe
Confidence 78999999999999997799999999864321 2356889999999994 4 56666554
Q ss_pred eCCceEEEEecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEe
Q 006886 401 SKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCIS 480 (627)
Q Consensus 401 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~ 480 (627)
. +..++||||+++|+|.+ +.. .....++.|++.||.|||+.+ |+||||||+|||++ ++.+||+
T Consensus 172 ~-~~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NILl~-~~~vkl~ 234 (282)
T 1zar_A 172 W-EGNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLVS-EEGIWII 234 (282)
T ss_dssp E-ETTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEE-TTEEEEC
T ss_pred c-cceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEEEE-CCcEEEE
Confidence 3 55689999999999987 421 124469999999999999998 99999999999999 9999999
Q ss_pred ecccccccCCCCCCCCCccccCccccC
Q 006886 481 DVGLAHLINFPTTATRTIGYRAPEVTE 507 (627)
Q Consensus 481 DfG~a~~~~~~~~~~~t~~y~aPE~~~ 507 (627)
|||+++.. ..|+|||++.
T Consensus 235 DFG~a~~~---------~~~~a~e~l~ 252 (282)
T 1zar_A 235 DFPQSVEV---------GEEGWREILE 252 (282)
T ss_dssp CCTTCEET---------TSTTHHHHHH
T ss_pred ECCCCeEC---------CCCCHHHHHH
Confidence 99998754 3468888774
No 258
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.84 E-value=3.9e-22 Score=205.05 Aligned_cols=186 Identities=18% Similarity=0.312 Sum_probs=147.2
Q ss_pred cCChhHHHHHHHHHhhCC---CCCCCCCC---C-CCCCCCCCcceEeeC--------CCCcEEEEEcCCCCcccccCccc
Q 006886 25 ADLNSDKQALLDFADAVP---HARKLNWN---A-AAPVCSSWIGVTCNV--------NRSRVIGIHLPGIGFTGPIPANS 89 (627)
Q Consensus 25 ~~~~~~~~~l~~~~~~~~---~~~~~~W~---~-~~~~c~~w~gv~C~~--------~~~~v~~l~l~~~~l~~~~~~~~ 89 (627)
.++..+..||++||..+. .....+|. . ..++| .|.|+.|.. ...+|+.|+|++|+++ .+|+ .
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~-~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~-~ 99 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIE-TRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPD-Q 99 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSC-CSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCS-C
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhccccccccccc-ccCCcchhhhHHHHhcccccceeEEEccCCCch-hcCh-h
Confidence 456679999999999772 22234684 2 33455 799999952 3478999999999998 8888 6
Q ss_pred cCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhcc-ccccccccccccccCCcccccc------
Q 006886 90 IGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSL-QLNALDLSFNAFTGNIPPGFQN------ 162 (627)
Q Consensus 90 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-~L~~L~ls~N~l~~~~p~~~~~------ 162 (627)
+.++++|+.|+|++|.|+ .+|..|+.+++|++|+|++|+++.+++.+... +|+.|+|++|++.+.+|..+..
T Consensus 100 l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~ 178 (328)
T 4fcg_A 100 AFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLRALPASIASLNRLRELSIRACPELTELPEPLASTDASGE 178 (328)
T ss_dssp GGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCCCCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCC
T ss_pred hhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccccCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhh
Confidence 888999999999999999 89999999999999999999999665555554 7899999998888888877654
Q ss_pred ---ccccccccccCCcccccCCCC--CCCccceeeccCCCccccCCCCCCCCCCCcccC
Q 006886 163 ---LTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 163 ---l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
+++|++|++++|+|+ .+|.. .+++|+.|+|++|+++ .+|..+..+++|+.++
T Consensus 179 ~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~ 235 (328)
T 4fcg_A 179 HQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELD 235 (328)
T ss_dssp EEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEE
T ss_pred hccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEE
Confidence 888888888888888 55543 7788888888888888 4666677777777654
No 259
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.84 E-value=2.1e-21 Score=222.71 Aligned_cols=114 Identities=36% Similarity=0.663 Sum_probs=90.7
Q ss_pred cccccEEeeecccccccCchhhc--cccccccccccccccCCccccccccccccccccCCcccccCCCC--CCCccceee
Q 006886 117 ISSLQYVYLQNNYFSGVLPAFRS--LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILN 192 (627)
Q Consensus 117 l~~L~~L~l~~N~l~~~~~~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~ 192 (627)
+++|++|||++|+++|.+|.... .+|+.|+|++|+|+|.+|..|+++++|+.|||++|+++|.+|.. .+++|++|+
T Consensus 631 l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 710 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID 710 (768)
T ss_dssp SBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEE
T ss_pred cccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEE
Confidence 45666777777777776665333 26888888888888888888888888888888888888888865 788888888
Q ss_pred ccCCCccccCCCC--CCCCCCCcccCCCcCCCCCCCCCCC
Q 006886 193 FSNNNLNGSIPDS--LQTFPNSSFVGNSMLCGLPLTPCST 230 (627)
Q Consensus 193 l~~N~l~~~~p~~--~~~~~~l~~~~n~~~~~~~~~~c~~ 230 (627)
+++|+|+|.+|.. +..++.+.|.||+.+||.|+.+|..
T Consensus 711 ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~~C~~ 750 (768)
T 3rgz_A 711 LSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDP 750 (768)
T ss_dssp CCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSCCCCS
T ss_pred CcCCcccccCCCchhhccCCHHHhcCCchhcCCCCcCCCC
Confidence 8888888888864 6677888899999999999888875
No 260
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.83 E-value=1.8e-20 Score=184.96 Aligned_cols=153 Identities=22% Similarity=0.260 Sum_probs=128.5
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhc--ccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNALD 146 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~--~~L~~L~ 146 (627)
..++.|+|++|++++..+. .|.++++|+.|+|++|.|++..|..|..+++|++|+|++|++++.++..+. .+|+.|+
T Consensus 35 ~~l~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 113 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDA-TFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLY 113 (251)
T ss_dssp TTCCEEECTTSCCCCCCTT-TTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEEccCCCcCccCHh-HhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEE
Confidence 4588899999999865554 799999999999999999988888899999999999999999988876543 3899999
Q ss_pred ccccccccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCCCCCCCCCCCccc---CCCcCC
Q 006886 147 LSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV---GNSMLC 221 (627)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~---~n~~~~ 221 (627)
|++|+|++..+..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|++++..+..+..+++|+.+ +|+..|
T Consensus 114 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 114 LGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred cCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 9999999766667889999999999999999766643 78999999999999997777778877777655 566655
Q ss_pred C
Q 006886 222 G 222 (627)
Q Consensus 222 ~ 222 (627)
.
T Consensus 194 ~ 194 (251)
T 3m19_A 194 S 194 (251)
T ss_dssp T
T ss_pred C
Confidence 4
No 261
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=1.7e-19 Score=175.36 Aligned_cols=151 Identities=23% Similarity=0.225 Sum_probs=102.2
Q ss_pred CCCCCCCCCCCcceEeeCC---------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCccc
Q 006886 49 WNAAAPVCSSWIGVTCNVN---------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISS 119 (627)
Q Consensus 49 W~~~~~~c~~w~gv~C~~~---------~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 119 (627)
|......| +|.+|.|+.. ..+++.|+|++|++++..|. .|.++++|+.|+|++|+|++..+..|..+++
T Consensus 12 ~~~~~~~C-s~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~ 89 (229)
T 3e6j_A 12 ACPSQCSC-SGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPG-VFDSLINLKELYLGSNQLGALPVGVFDSLTQ 89 (229)
T ss_dssp CCCTTCEE-ETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTT-TTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred cCCCCCEE-eCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHH-HhhCccCCcEEECCCCCCCCcChhhcccCCC
Confidence 44455566 7999999752 24567777777777755454 6777777777777777776444455677777
Q ss_pred ccEEeeecccccccCchhhc--cccccccccccccccCCccccccccccccccccCCcccccCCCC--CCCccceeeccC
Q 006886 120 LQYVYLQNNYFSGVLPAFRS--LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSN 195 (627)
Q Consensus 120 L~~L~l~~N~l~~~~~~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~ 195 (627)
|++|+|++|+|+++++..+. .+|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+.. .+++|+.|+|++
T Consensus 90 L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 168 (229)
T 3e6j_A 90 LTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFG 168 (229)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred cCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeC
Confidence 77777777777776665432 36777777777777 56777777777777777777777544432 567777777777
Q ss_pred CCccccC
Q 006886 196 NNLNGSI 202 (627)
Q Consensus 196 N~l~~~~ 202 (627)
|++++..
T Consensus 169 N~~~c~c 175 (229)
T 3e6j_A 169 NPWDCEC 175 (229)
T ss_dssp SCBCTTB
T ss_pred CCccCCc
Confidence 7776543
No 262
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.79 E-value=6.2e-20 Score=187.39 Aligned_cols=143 Identities=22% Similarity=0.368 Sum_probs=95.1
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcc-cccEEeeecccccccCchh-hcccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSIS-SLQYVYLQNNYFSGVLPAF-RSLQLNALD 146 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~~~~-~~~~L~~L~ 146 (627)
.+++.|+|++|.+++.+|. .+..+++|+.|+|++|.+++.+|..+..++ +|++|+|++|++++.+|.. ...+|+.|+
T Consensus 125 ~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~ 203 (313)
T 1ogq_A 125 KTLVTLDFSYNALSGTLPP-SISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVD 203 (313)
T ss_dssp TTCCEEECCSSEEESCCCG-GGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEE
T ss_pred CCCCEEeCCCCccCCcCCh-HHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEE
Confidence 5688888888888888877 788888888888888888888888888887 8888888888888766643 333567777
Q ss_pred ccccccccCCccccccccccccccccCCcccccCCCC-CCCccceeeccCCCccccCCCCCCCCCCC
Q 006886 147 LSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL-NLPRLKILNFSNNNLNGSIPDSLQTFPNS 212 (627)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~L~~L~l~~N~l~~~~p~~~~~~~~l 212 (627)
|++|.+++.+|..|..+++|+.|++++|++++.+|.. .+++|++|++++|++++.+|..+..+++|
T Consensus 204 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 270 (313)
T 1ogq_A 204 LSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFL 270 (313)
T ss_dssp CCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTC
T ss_pred CcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCC
Confidence 7777666666666666655555555555555444432 34444444444444444444444333333
No 263
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=6.9e-19 Score=169.89 Aligned_cols=149 Identities=19% Similarity=0.261 Sum_probs=104.8
Q ss_pred EEEcCCCCcccccCccccCCCCcccEEEccCcccCccCC-CCCCCcccccEEeeecccccccCch-hhc-cccccccccc
Q 006886 73 GIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLP-SDITSISSLQYVYLQNNYFSGVLPA-FRS-LQLNALDLSF 149 (627)
Q Consensus 73 ~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~L~ls~ 149 (627)
.+++++|+++ .+|. .+ .+.++.|+|++|.|++..| ..|..+++|++|+|++|+|+++++. +.. .+|+.|+|++
T Consensus 15 ~l~~s~n~l~-~iP~-~~--~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 15 TVDCSNQKLN-KIPE-HI--PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EEECCSSCCS-SCCS-CC--CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EeEeCCCCcc-cCcc-CC--CCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 5677777776 4665 33 2345778888888876644 3467778888888888888877764 333 3688888888
Q ss_pred cccccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCCCCCCCCCCCccc---CCCcCCCCC
Q 006886 150 NAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV---GNSMLCGLP 224 (627)
Q Consensus 150 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~---~n~~~~~~~ 224 (627)
|+|++..|..|.++++|++|+|++|+|++..|.. .+++|+.|+|++|+|++..|..|..+++|+.+ +|++.|+++
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 8887666667777888888888888887766643 67778888888888877777777776666543 566767655
Q ss_pred C
Q 006886 225 L 225 (627)
Q Consensus 225 ~ 225 (627)
+
T Consensus 171 l 171 (220)
T 2v70_A 171 L 171 (220)
T ss_dssp G
T ss_pred h
Confidence 3
No 264
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.77 E-value=1.5e-18 Score=173.15 Aligned_cols=146 Identities=20% Similarity=0.294 Sum_probs=101.2
Q ss_pred cEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhc--cccccccc
Q 006886 70 RVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNALDL 147 (627)
Q Consensus 70 ~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~--~~L~~L~l 147 (627)
.++.|+|++|++++ +++..|.++++|+.|+|++|.|+...+..|..+++|++|+|++|++++.++..+. .+|+.|+|
T Consensus 38 ~l~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 38 DTKKLDLQSNKLSS-LPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TCSEEECCSSCCSC-CCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCEEECcCCCCCe-eCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 46677777777763 4443677777777777777777754444557777777777777777777665432 36777777
Q ss_pred cccccccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCCCCCCCCCCCcccC
Q 006886 148 SFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
++|.+++..|..|.++++|++|+|++|+|++..+.. .+++|+.|++++|++++..+..|..+++|+.++
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 187 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLK 187 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEE
Confidence 777777666666777777777777777777654432 677777777777777765555676677666654
No 265
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.76 E-value=2e-18 Score=165.14 Aligned_cols=146 Identities=22% Similarity=0.279 Sum_probs=119.7
Q ss_pred CCCcceEeeCC---------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeec
Q 006886 57 SSWIGVTCNVN---------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQN 127 (627)
Q Consensus 57 ~~w~gv~C~~~---------~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 127 (627)
|.|.+|.|... ..+++.|+|++|++++ +++..|..+++|+.|+|++|+|++..+..|..+++|++|+|++
T Consensus 7 C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 7 CSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKS-LPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCC-CCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCc-CChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 47999999752 2468899999999984 5554788999999999999999966666678899999999999
Q ss_pred ccccccCchhh-c-cccccccccccccccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCC
Q 006886 128 NYFSGVLPAFR-S-LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIP 203 (627)
Q Consensus 128 N~l~~~~~~~~-~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p 203 (627)
|++++.++..+ . .+|+.|+|++|+|++..+..|.++++|+.|++++|+|++..+.. .+++|+.|++++|++++..|
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC
Confidence 99998887643 3 38999999999999766667888999999999999999766643 78899999999998875443
No 266
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.76 E-value=4.1e-18 Score=164.47 Aligned_cols=147 Identities=22% Similarity=0.228 Sum_probs=130.4
Q ss_pred CCCcceEeeCC---------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeec
Q 006886 57 SSWIGVTCNVN---------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQN 127 (627)
Q Consensus 57 ~~w~gv~C~~~---------~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 127 (627)
|.|..+.|+.. ...++.|+|++|++++..+...|..+++|+.|+|++|.|++..|..|..+++|++|+|++
T Consensus 11 C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 11 CEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 47999999753 235789999999999776665799999999999999999988888999999999999999
Q ss_pred ccccccCchhhc--cccccccccccccccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCC
Q 006886 128 NYFSGVLPAFRS--LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIP 203 (627)
Q Consensus 128 N~l~~~~~~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p 203 (627)
|+|+++++..+. .+|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|.. .+++|+.|+|++|++++..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 999999987443 48999999999999888999999999999999999999887754 89999999999999986644
No 267
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.76 E-value=1.9e-18 Score=171.09 Aligned_cols=133 Identities=16% Similarity=0.170 Sum_probs=102.3
Q ss_pred hcccCcCCceeEEEEEe-cCCcE--EEEEEecccccC-------------------------HHHHHHHHHHHHHhccCC
Q 006886 339 AEVLGKGSYGSTYKAIL-EDGTT--VVVKRLREVAAT-------------------------KREFEQQMEVVGTIGKHS 390 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~-~~~~~--vavK~l~~~~~~-------------------------~~~~~~e~~~l~~l~~h~ 390 (627)
.+.||+|+||.||+|.. .+|+. ||||+++..... ...+.+|++++.++ .|+
T Consensus 52 ~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~ 130 (258)
T 1zth_A 52 GGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA-KEA 130 (258)
T ss_dssp EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH-HHT
T ss_pred CCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH-HhC
Confidence 36799999999999997 67888 999987543111 13578899999999 676
Q ss_pred Ce--eeeeeEEeeCCceEEEEecCCC-C----CHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCeeec
Q 006886 391 NV--VPVRAYYYSKDEKLVVYSYMPA-G----SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIH-SEGGAKFTHG 462 (627)
Q Consensus 391 ni--v~l~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH-~~~~~~ivH~ 462 (627)
++ ...+.. +..++||||+.+ | +|.++... .++..+..++.|++.||.||| +.+ |+||
T Consensus 131 ~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~~~g---ivHr 195 (258)
T 1zth_A 131 GVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQEAE---LVHA 195 (258)
T ss_dssp TCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHHTSC---EECS
T ss_pred CCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHHHCC---EEeC
Confidence 54 223322 356899999942 4 67665432 223456789999999999999 888 9999
Q ss_pred CCCCCCeEecCCCCeEEeecccccccC
Q 006886 463 NIKSSNVLLTQDLNGCISDVGLAHLIN 489 (627)
Q Consensus 463 Dlk~~NILl~~~~~~ki~DfG~a~~~~ 489 (627)
||||+|||++. .++|+|||+|....
T Consensus 196 Dlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 196 DLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp SCSTTSEEESS--SEEECCCTTCEETT
T ss_pred CCCHHHEEEcC--cEEEEECcccccCC
Confidence 99999999998 99999999997653
No 268
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.76 E-value=1.8e-18 Score=167.02 Aligned_cols=146 Identities=24% Similarity=0.323 Sum_probs=80.3
Q ss_pred EEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhh-c-cccccccccccc
Q 006886 74 IHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFR-S-LQLNALDLSFNA 151 (627)
Q Consensus 74 l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~-~-~~L~~L~ls~N~ 151 (627)
+++++++++ .+|. .+. ++|+.|+|++|.|++..|..|..+++|++|+|++|+|+++.|..+ . .+|+.|+|++|+
T Consensus 16 v~c~~~~l~-~iP~-~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 16 VDCRGKGLT-EIPT-NLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EECTTSCCS-SCCS-SCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEcCCCCcC-cCCC-ccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 444455555 4444 222 456666666666665555556666666666666666666555322 2 256666666666
Q ss_pred cccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCCCCCCCCCCCccc---CCCcCCCC
Q 006886 152 FTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV---GNSMLCGL 223 (627)
Q Consensus 152 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~---~n~~~~~~ 223 (627)
|+...+..|.++++|+.|+|++|+|++..|.. .+++|+.|+|++|+|++..+..|..+++|+.+ +|++.|++
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDC 168 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCC
Confidence 66433334555666666666666666554432 55666666666666665555555555544432 45555544
No 269
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.75 E-value=6e-18 Score=163.26 Aligned_cols=144 Identities=20% Similarity=0.257 Sum_probs=128.0
Q ss_pred CCCcceEeeCC---------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeec
Q 006886 57 SSWIGVTCNVN---------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQN 127 (627)
Q Consensus 57 ~~w~gv~C~~~---------~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 127 (627)
|.|..|.|... ...++.|+|++|++++ +++..|..+++|+.|+|++|.|++..|..|..+++|++|+|++
T Consensus 11 C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~-i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 11 CSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKV-IPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp EETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCE-ECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred ECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCC-cCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 47999999752 2479999999999995 5555899999999999999999988899999999999999999
Q ss_pred ccccccCchhhc--cccccccccccccccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCcccc
Q 006886 128 NYFSGVLPAFRS--LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGS 201 (627)
Q Consensus 128 N~l~~~~~~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~ 201 (627)
|+|+++++..+. .+|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|++...
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 999998887543 48999999999999888899999999999999999999877653 799999999999999753
No 270
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.75 E-value=6.9e-18 Score=168.56 Aligned_cols=153 Identities=22% Similarity=0.278 Sum_probs=133.0
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhc--ccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNALD 146 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~--~~L~~L~ 146 (627)
.+++.|+|++|++++ ++ .+..+++|+.|+|++|.+++..|..|..+++|++|+|++|++++.++..+. .+|+.|+
T Consensus 63 ~~L~~L~l~~n~l~~-~~--~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 63 PNVRYLALGGNKLHD-IS--ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp TTCCEEECTTSCCCC-CG--GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCC-ch--hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 679999999999986 33 699999999999999999987777889999999999999999999887433 4899999
Q ss_pred ccccccccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCCCCCCCCCCCccc---CCCcCC
Q 006886 147 LSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV---GNSMLC 221 (627)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~---~n~~~~ 221 (627)
|++|++++..|..|.++++|+.|++++|++++..+.. .+++|+.|++++|++++..|..+..+++|+.+ +|+..|
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 219 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc
Confidence 9999999777777899999999999999999876653 79999999999999998888778888887765 566666
Q ss_pred CCC
Q 006886 222 GLP 224 (627)
Q Consensus 222 ~~~ 224 (627)
.++
T Consensus 220 ~~~ 222 (272)
T 3rfs_A 220 TCP 222 (272)
T ss_dssp CTT
T ss_pred cCc
Confidence 543
No 271
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.74 E-value=8.9e-18 Score=167.54 Aligned_cols=155 Identities=21% Similarity=0.268 Sum_probs=133.4
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhc--ccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNALD 146 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~--~~L~~L~ 146 (627)
.+++.|+|++|+++ .+|...|.++++|+.|+|++|.+++..+..|..+++|++|+|++|++++.++..+. .+|+.|+
T Consensus 61 ~~L~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 139 (270)
T 2o6q_A 61 TKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLS 139 (270)
T ss_dssp TTCCEEECCSSCCS-CCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccC-eeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEE
Confidence 67999999999998 67766789999999999999999977777889999999999999999999886543 4899999
Q ss_pred ccccccccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCCCCCCCCCCCccc---CCCcCC
Q 006886 147 LSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV---GNSMLC 221 (627)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~---~n~~~~ 221 (627)
|++|.|++..+..|..+++|+.|+|++|++++..+.. .+++|+.|+|++|++++..+..+..+++|+.+ +|++.|
T Consensus 140 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 140 LGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 9999999766667999999999999999999866643 78999999999999997666667777776654 677777
Q ss_pred CCC
Q 006886 222 GLP 224 (627)
Q Consensus 222 ~~~ 224 (627)
++.
T Consensus 220 ~c~ 222 (270)
T 2o6q_A 220 TCN 222 (270)
T ss_dssp SSS
T ss_pred CCc
Confidence 653
No 272
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.73 E-value=1.5e-17 Score=161.46 Aligned_cols=156 Identities=22% Similarity=0.287 Sum_probs=130.9
Q ss_pred CcceEeeCCCCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhh
Q 006886 59 WIGVTCNVNRSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFR 138 (627)
Q Consensus 59 w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~ 138 (627)
|..-.|+. +.++.++++++ .+|. .+ .++|+.|+|++|.|++..|..|..+++|++|+|++|+|+++++..+
T Consensus 14 ~~~~~Cs~-----~~v~c~~~~l~-~ip~-~~--~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~ 84 (229)
T 3e6j_A 14 PSQCSCSG-----TTVDCRSKRHA-SVPA-GI--PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVF 84 (229)
T ss_dssp CTTCEEET-----TEEECTTSCCS-SCCS-CC--CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred CCCCEEeC-----CEeEccCCCcC-ccCC-CC--CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhc
Confidence 55567763 45889999988 7887 33 3899999999999999889999999999999999999998887654
Q ss_pred c--cccccccccccccccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCCCCCCCCCCCcc
Q 006886 139 S--LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSF 214 (627)
Q Consensus 139 ~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~ 214 (627)
. .+|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|.. .+++|+.|+|++|+|++..+..+..+++|+.
T Consensus 85 ~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 163 (229)
T 3e6j_A 85 DSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTH 163 (229)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred ccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCE
Confidence 3 48999999999999776777899999999999999999 45543 8999999999999999776677887777765
Q ss_pred c---CCCcCCCCC
Q 006886 215 V---GNSMLCGLP 224 (627)
Q Consensus 215 ~---~n~~~~~~~ 224 (627)
+ +|++.|.++
T Consensus 164 L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 164 AYLFGNPWDCECR 176 (229)
T ss_dssp EECTTSCBCTTBG
T ss_pred EEeeCCCccCCcc
Confidence 4 677777653
No 273
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.73 E-value=2.6e-18 Score=176.40 Aligned_cols=145 Identities=21% Similarity=0.309 Sum_probs=127.7
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCC---------cccccEEeeecccccccCchhhc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITS---------ISSLQYVYLQNNYFSGVLPAFRS 139 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~---------l~~L~~L~l~~N~l~~~~~~~~~ 139 (627)
.+++.|+|++|.++ .+|. .+.++++|+.|+|++|++.+.+|..+.. +++|++|+|++|+++.++..+..
T Consensus 127 ~~L~~L~Ls~n~l~-~lp~-~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~l~~ 204 (328)
T 4fcg_A 127 AGLETLTLARNPLR-ALPA-SIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPASIAN 204 (328)
T ss_dssp TTCSEEEEESCCCC-CCCG-GGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCCCCGGGGG
T ss_pred CCCCEEECCCCccc-cCcH-HHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcCcchHhhcC
Confidence 57999999999999 8887 7999999999999999998899988765 99999999999999966555554
Q ss_pred c-ccccccccccccccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCCCCCCCCCCCcccC
Q 006886 140 L-QLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 140 ~-~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
. +|+.|+|++|.+++ +|..+.++++|+.|++++|++.+.+|.. .+++|+.|+|++|++.+.+|..+.++++|+.++
T Consensus 205 l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~ 283 (328)
T 4fcg_A 205 LQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLD 283 (328)
T ss_dssp CTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEE
T ss_pred CCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEe
Confidence 4 79999999999995 7778999999999999999999988865 889999999999999999999998888888764
No 274
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.72 E-value=2.3e-18 Score=179.42 Aligned_cols=168 Identities=23% Similarity=0.254 Sum_probs=139.4
Q ss_pred CCCcceEeeCC---------CCcEEEEEcCCCCcccccCccccC-CCCcccEEEccCcccCccCCCCCCCcccccEEeee
Q 006886 57 SSWIGVTCNVN---------RSRVIGIHLPGIGFTGPIPANSIG-KLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQ 126 (627)
Q Consensus 57 ~~w~gv~C~~~---------~~~v~~l~l~~~~l~~~~~~~~l~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 126 (627)
|.|..+.|... ...++.|+|++|++++ ++...+. ++++|+.|+|++|+|++..|..|..+++|++|+|+
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~-l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSR-LRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCE-ECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCc-cChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 36888888652 2458899999999995 4444787 99999999999999998888889999999999999
Q ss_pred cccccccCchhh-c-cccccccccccccccCCccccccccccccccccCCcccccCCC-----CCCCccceeeccCCCcc
Q 006886 127 NNYFSGVLPAFR-S-LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPP-----LNLPRLKILNFSNNNLN 199 (627)
Q Consensus 127 ~N~l~~~~~~~~-~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-----~~~~~L~~L~l~~N~l~ 199 (627)
+|+|+++++..+ . .+|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+. ..+++|+.|+|++|+|+
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 999999988643 3 4899999999999988889999999999999999999975443 25899999999999999
Q ss_pred ccCCCCCCCCC-----CCcccCCCcCCCCCC
Q 006886 200 GSIPDSLQTFP-----NSSFVGNSMLCGLPL 225 (627)
Q Consensus 200 ~~~p~~~~~~~-----~l~~~~n~~~~~~~~ 225 (627)
+..+..+..++ .|...+|++.|+|.+
T Consensus 177 ~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~l 207 (361)
T 2xot_A 177 KLPLTDLQKLPAWVKNGLYLHNNPLECDCKL 207 (361)
T ss_dssp CCCHHHHHHSCHHHHTTEECCSSCEECCHHH
T ss_pred ccCHHHhhhccHhhcceEEecCCCccCCcCc
Confidence 55545566554 356678999998753
No 275
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.71 E-value=2.4e-17 Score=166.15 Aligned_cols=131 Identities=26% Similarity=0.296 Sum_probs=62.2
Q ss_pred CCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhh-c-cccccccccccccccCCcccccccccccc
Q 006886 91 GKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFR-S-LQLNALDLSFNAFTGNIPPGFQNLTRLHL 168 (627)
Q Consensus 91 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~-~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~ 168 (627)
+.+++|+.|+|++|.|+ .+|..+..+++|++|+|++|+|+++++..+ . .+|+.|+|++|+|++..+..|..+++|+.
T Consensus 74 ~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 152 (290)
T 1p9a_G 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEK 152 (290)
T ss_dssp SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCE
Confidence 34444444444444444 444445555555555555555555544322 2 24555555555555433344455555555
Q ss_pred ccccCCcccccCCCC--CCCccceeeccCCCccccCCCCCCCCCCCcc---cCCCcCCCC
Q 006886 169 LNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSF---VGNSMLCGL 223 (627)
Q Consensus 169 L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~---~~n~~~~~~ 223 (627)
|+|++|+|++.++.. .+++|+.|+|++|+|+ .+|..+..+..|.. .+|++.|++
T Consensus 153 L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 153 LSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp EECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred EECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcC
Confidence 555555555333322 3555555555555555 44444444333332 245554443
No 276
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.71 E-value=1.1e-17 Score=168.16 Aligned_cols=147 Identities=20% Similarity=0.175 Sum_probs=108.1
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcc-cCccCCCCCCCcccccEEeeecccccccCchhhc--cccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNY-LNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNAL 145 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~--~~L~~L 145 (627)
.+++.|+|++|.+++..|. .|..+++|+.|+|++|. ++...|..|..+++|++|+|++|++++.++..+. .+|++|
T Consensus 56 ~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 134 (285)
T 1ozn_A 56 RNLTILWLHSNVLARIDAA-AFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYL 134 (285)
T ss_dssp TTCCEEECCSSCCCEECTT-TTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCEEECCCCccceeCHh-hcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEE
Confidence 5678888888888755454 67888888888888886 7655577777888888888888888877665433 368888
Q ss_pred cccccccccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCCCCCCCCCCCcccC
Q 006886 146 DLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 146 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
+|++|++++..+..|..+++|+.|++++|++++..+.. .+++|+.|++++|.+++..|..+..+++|+.++
T Consensus 135 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 207 (285)
T 1ozn_A 135 YLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLY 207 (285)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred ECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEee
Confidence 88888887655556777888888888888887655532 677788888888888777777777777776653
No 277
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.70 E-value=1.8e-17 Score=172.10 Aligned_cols=164 Identities=26% Similarity=0.335 Sum_probs=136.0
Q ss_pred CCCCCCCCCCCcceEeeCC-----------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCc
Q 006886 49 WNAAAPVCSSWIGVTCNVN-----------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSI 117 (627)
Q Consensus 49 W~~~~~~c~~w~gv~C~~~-----------~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l 117 (627)
|......| .|.|+ |+.. ..+++.|+|++|++++ +|...|.++++|+.|+|++|.+++..|..|.++
T Consensus 23 ~~~~~~~C-~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 99 (353)
T 2z80_A 23 SNQASLSC-DRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITY-ISNSDLQRCVNLQALVLTSNGINTIEEDSFSSL 99 (353)
T ss_dssp ----CCEE-CTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred CCccCCCC-CCCeE-eeCCCCCcccccccccccCcEEECCCCcCcc-cCHHHhccCCCCCEEECCCCccCccCHhhcCCC
Confidence 43344445 78887 7642 2479999999999995 555589999999999999999998888899999
Q ss_pred ccccEEeeecccccccCch-hhc-cccccccccccccccCCcc--ccccccccccccccCCc-ccccCCCC--CCCccce
Q 006886 118 SSLQYVYLQNNYFSGVLPA-FRS-LQLNALDLSFNAFTGNIPP--GFQNLTRLHLLNLQNNS-ISGAIPPL--NLPRLKI 190 (627)
Q Consensus 118 ~~L~~L~l~~N~l~~~~~~-~~~-~~L~~L~ls~N~l~~~~p~--~~~~l~~L~~L~l~~N~-l~~~~p~~--~~~~L~~ 190 (627)
++|++|+|++|++++.++. +.. .+|++|+|++|++++ +|. .|.++++|++|++++|+ +++..+.. .+++|+.
T Consensus 100 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~ 178 (353)
T 2z80_A 100 GSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEE 178 (353)
T ss_dssp TTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEE
T ss_pred CCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc-cCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCE
Confidence 9999999999999998886 333 389999999999995 555 79999999999999995 66554543 8999999
Q ss_pred eeccCCCccccCCCCCCCCCCCcccC
Q 006886 191 LNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 191 L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
|++++|.+++..|..+..+++|+.++
T Consensus 179 L~l~~n~l~~~~~~~l~~l~~L~~L~ 204 (353)
T 2z80_A 179 LEIDASDLQSYEPKSLKSIQNVSHLI 204 (353)
T ss_dssp EEEEETTCCEECTTTTTTCSEEEEEE
T ss_pred EECCCCCcCccCHHHHhccccCCeec
Confidence 99999999999999999999888764
No 278
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.69 E-value=2.1e-17 Score=182.19 Aligned_cols=157 Identities=23% Similarity=0.256 Sum_probs=137.3
Q ss_pred CCcceEeeCC-----------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeee
Q 006886 58 SWIGVTCNVN-----------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQ 126 (627)
Q Consensus 58 ~w~gv~C~~~-----------~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 126 (627)
.|.|+ |+.. ..+++.|+|++|++++..|. .|.++++|+.|+|++|++++..|..|..+++|++|+|+
T Consensus 5 ~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls 82 (549)
T 2z81_A 5 DASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHG-DLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLS 82 (549)
T ss_dssp CTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSS-TTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECT
T ss_pred CCCce-EECCCCccccccccCCCCccEEECcCCccCccChh-hhhcCCcccEEECCCCCcCccChhhccccccCCEEECC
Confidence 79998 8742 24799999999999976665 89999999999999999998888999999999999999
Q ss_pred cccccccCch-hhcc-cccccccccccccc-CCccccccccccccccccCCcccccCCC-C--CCCccceeeccCCCccc
Q 006886 127 NNYFSGVLPA-FRSL-QLNALDLSFNAFTG-NIPPGFQNLTRLHLLNLQNNSISGAIPP-L--NLPRLKILNFSNNNLNG 200 (627)
Q Consensus 127 ~N~l~~~~~~-~~~~-~L~~L~ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~--~~~~L~~L~l~~N~l~~ 200 (627)
+|++++.+|. +... +|++|+|++|.+++ .+|..|+++++|++|++++|++.+.+|. . .+++|++|++++|.+++
T Consensus 83 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 162 (549)
T 2z81_A 83 DNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRN 162 (549)
T ss_dssp TSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCE
T ss_pred CCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccc
Confidence 9999999987 4444 89999999999996 3678899999999999999996666653 2 89999999999999999
Q ss_pred cCCCCCCCCCCCcccC
Q 006886 201 SIPDSLQTFPNSSFVG 216 (627)
Q Consensus 201 ~~p~~~~~~~~l~~~~ 216 (627)
.+|..+..+++|+.++
T Consensus 163 ~~~~~l~~l~~L~~L~ 178 (549)
T 2z81_A 163 YQSQSLKSIRDIHHLT 178 (549)
T ss_dssp ECTTTTTTCSEEEEEE
T ss_pred cChhhhhccccCceEe
Confidence 9999998888776653
No 279
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.69 E-value=1.3e-17 Score=169.63 Aligned_cols=159 Identities=25% Similarity=0.326 Sum_probs=123.8
Q ss_pred CCCcceEeeCC---------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCcc--CCCCCCCcccccEEee
Q 006886 57 SSWIGVTCNVN---------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGT--LPSDITSISSLQYVYL 125 (627)
Q Consensus 57 ~~w~gv~C~~~---------~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~l 125 (627)
|.|.+|.|+.. ..+++.|+|++|+++ .+|...|.++++|+.|+|++|.++.. .|..+..+++|++|+|
T Consensus 7 C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 7 CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC
T ss_pred eCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC
Confidence 48999999862 257999999999998 67776789999999999999999832 3566677888888888
Q ss_pred ecccccccCchhhcc-ccccccccccccccCCc-cccccccccccccccCCcccccCCCC--CCCccceeeccCCCccc-
Q 006886 126 QNNYFSGVLPAFRSL-QLNALDLSFNAFTGNIP-PGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNG- 200 (627)
Q Consensus 126 ~~N~l~~~~~~~~~~-~L~~L~ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~- 200 (627)
++|.+.+.++.+... +|+.|+|++|++++..+ ..+.++++|++|++++|++++..+.. .+++|+.|++++|.+++
T Consensus 86 s~n~i~~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 165 (306)
T 2z66_A 86 SFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 165 (306)
T ss_dssp CSCSEEEEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG
T ss_pred CCCccccChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc
Confidence 888888766654443 78888888888885443 46778888888888888887766653 67788888888888876
Q ss_pred cCCCCCCCCCCCcccC
Q 006886 201 SIPDSLQTFPNSSFVG 216 (627)
Q Consensus 201 ~~p~~~~~~~~l~~~~ 216 (627)
.+|..+..+++|+.++
T Consensus 166 ~~~~~~~~l~~L~~L~ 181 (306)
T 2z66_A 166 FLPDIFTELRNLTFLD 181 (306)
T ss_dssp EECSCCTTCTTCCEEE
T ss_pred cchhHHhhCcCCCEEE
Confidence 5677777777777664
No 280
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.69 E-value=1.4e-17 Score=157.04 Aligned_cols=128 Identities=26% Similarity=0.301 Sum_probs=107.5
Q ss_pred EEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCC-CCCCcccccEEeeecccccccCchhh-c-ccccccccc
Q 006886 72 IGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPS-DITSISSLQYVYLQNNYFSGVLPAFR-S-LQLNALDLS 148 (627)
Q Consensus 72 ~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~~~~~~-~-~~L~~L~ls 148 (627)
+.|++++|+++ .+|. .+.. +|+.|+|++|.|++..|. .|..+++|++|+|++|+|+++.|..+ . .+|+.|+|+
T Consensus 11 ~~l~~s~~~l~-~ip~-~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPR-DIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TEEECTTSCCS-SCCS-CCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CEEEcCCCCcC-cCcc-CCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 46788888885 7887 3433 899999999999866654 48899999999999999999977543 3 389999999
Q ss_pred ccccccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCC
Q 006886 149 FNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIP 203 (627)
Q Consensus 149 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p 203 (627)
+|+|++..|..|.++++|++|+|++|+|++.+|.. .+++|++|+|++|++++..+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 99999888888999999999999999999887764 78999999999999987655
No 281
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.69 E-value=8.2e-17 Score=161.85 Aligned_cols=148 Identities=24% Similarity=0.239 Sum_probs=129.3
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeeccc-ccccCchhh-c-ccccc
Q 006886 68 RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNY-FSGVLPAFR-S-LQLNA 144 (627)
Q Consensus 68 ~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~~~~~-~-~~L~~ 144 (627)
...++.|+|++|++++ +++..|.++++|+.|+|++|.+++..|..|..+++|++|+|++|. +....+..+ . .+|++
T Consensus 31 ~~~l~~L~l~~n~i~~-~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~ 109 (285)
T 1ozn_A 31 PAASQRIFLHGNRISH-VPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHT 109 (285)
T ss_dssp CTTCSEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCE
T ss_pred CCCceEEEeeCCcCCc-cCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCE
Confidence 3579999999999995 454489999999999999999998889999999999999999997 888766543 3 38999
Q ss_pred ccccccccccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCCCCCCCCCCCcccC
Q 006886 145 LDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 145 L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
|+|++|.+++..|..|.++++|++|++++|++++..+.. .+++|+.|++++|++++..+..+..+++|+.++
T Consensus 110 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 183 (285)
T 1ozn_A 110 LHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLL 183 (285)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred EECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEE
Confidence 999999999877889999999999999999999766653 799999999999999977777788888888764
No 282
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.68 E-value=1e-16 Score=157.98 Aligned_cols=132 Identities=20% Similarity=0.251 Sum_probs=118.4
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhc--ccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNALD 146 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~--~~L~~L~ 146 (627)
.+++.|+|++|++++..+. .|..+++|+.|+|++|.|++..|..|..+++|++|+|++|+|+++++..+. .+|+.|+
T Consensus 59 ~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 137 (251)
T 3m19_A 59 TKLTWLNLDYNQLQTLSAG-VFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELR 137 (251)
T ss_dssp TTCCEEECTTSCCCCCCTT-TTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccCCEEECCCCcCCccCHh-HhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEE
Confidence 6799999999999975554 899999999999999999977778899999999999999999999887543 4899999
Q ss_pred ccccccccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCcccc
Q 006886 147 LSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGS 201 (627)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~ 201 (627)
|++|+|++..|..|.++++|+.|+|++|+|++.++.. .+++|+.|+|++|++++.
T Consensus 138 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 138 LNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 9999999766668999999999999999999876643 889999999999999865
No 283
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.68 E-value=3.2e-16 Score=149.76 Aligned_cols=155 Identities=23% Similarity=0.305 Sum_probs=127.7
Q ss_pred ceEeeCCCCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhc-
Q 006886 61 GVTCNVNRSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS- 139 (627)
Q Consensus 61 gv~C~~~~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~- 139 (627)
+..|.. +.+++++++++ .+|. .+ .++|+.|+|++|.+++..+..|..+++|++|+|++|+++++++..+.
T Consensus 4 ~C~C~~-----~~v~c~~~~l~-~~p~-~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 74 (208)
T 2o6s_A 4 RCSCSG-----TTVECYSQGRT-SVPT-GI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNK 74 (208)
T ss_dssp TCEEET-----TEEECCSSCCS-SCCS-CC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTT
T ss_pred CCEECC-----CEEEecCCCcc-CCCC-CC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCC
Confidence 456643 46888999988 5665 23 56899999999999977777789999999999999999998886543
Q ss_pred -cccccccccccccccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCCCCCCCCCCCccc-
Q 006886 140 -LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV- 215 (627)
Q Consensus 140 -~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~- 215 (627)
.+|++|+|++|+|++..+..|.++++|++|++++|+|++..+.. .+++|+.|++++|++++..+..+..+++|+.+
T Consensus 75 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 154 (208)
T 2o6s_A 75 LTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIW 154 (208)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred CCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEE
Confidence 48999999999999766667899999999999999999876653 79999999999999997766667877777655
Q ss_pred --CCCcCCCCC
Q 006886 216 --GNSMLCGLP 224 (627)
Q Consensus 216 --~n~~~~~~~ 224 (627)
+|+..|.++
T Consensus 155 l~~N~~~~~~~ 165 (208)
T 2o6s_A 155 LHDNPWDCTCP 165 (208)
T ss_dssp CCSCCBCCCTT
T ss_pred ecCCCeecCCC
Confidence 566666543
No 284
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.68 E-value=1.5e-16 Score=159.22 Aligned_cols=155 Identities=22% Similarity=0.261 Sum_probs=83.9
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCch-hhc-ccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPA-FRS-LQLNALD 146 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~L~ 146 (627)
.+++.|+|++|++++ +++..|.++++|+.|+|++|.+++..|..|.++++|++|+|++|++.+..+. +.. .+|+.|+
T Consensus 52 ~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 130 (276)
T 2z62_A 52 PELQVLDLSRCEIQT-IEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 130 (276)
T ss_dssp TTCSEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred cCCcEEECCCCcCCc-cCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEE
Confidence 345555665555553 2222455555555555555555555455555555555555555555554442 222 2455555
Q ss_pred ccccccccC-CccccccccccccccccCCcccc----------------------------cCCCC-CCCccceeeccCC
Q 006886 147 LSFNAFTGN-IPPGFQNLTRLHLLNLQNNSISG----------------------------AIPPL-NLPRLKILNFSNN 196 (627)
Q Consensus 147 ls~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~----------------------------~~p~~-~~~~L~~L~l~~N 196 (627)
|++|.+++. +|..|.++++|+.|++++|++++ ..+.. ...+|+.|++++|
T Consensus 131 l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n 210 (276)
T 2z62_A 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTN 210 (276)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSS
T ss_pred CcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCC
Confidence 555555532 35555555555555555555544 33322 3346777888888
Q ss_pred CccccCCCCCCCCCCCcc---cCCCcCCCCC
Q 006886 197 NLNGSIPDSLQTFPNSSF---VGNSMLCGLP 224 (627)
Q Consensus 197 ~l~~~~p~~~~~~~~l~~---~~n~~~~~~~ 224 (627)
++++..+..+..+++|+. .+|+..|+++
T Consensus 211 ~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 211 QLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred ceeecCHhHhcccccccEEEccCCcccccCC
Confidence 877555555566666554 3566666553
No 285
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.68 E-value=6.1e-17 Score=164.57 Aligned_cols=145 Identities=19% Similarity=0.255 Sum_probs=93.3
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCC-CCCCCcccccEEeeecccccccCchhhc--cccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLP-SDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNAL 145 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~~~--~~L~~L 145 (627)
.+++.|+|++|+++ .+|. .+..+++|+.|+|++|.+++..+ ..+..+++|++|+|++|.+.+..+..+. .+|+.|
T Consensus 78 ~~L~~L~Ls~n~i~-~l~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 155 (306)
T 2z66_A 78 TSLKYLDLSFNGVI-TMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 155 (306)
T ss_dssp SCCCEEECCSCSEE-EEEE-EEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEE
T ss_pred cccCEEECCCCccc-cChh-hcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEE
Confidence 45777777777776 4555 46677777777777777764433 4566677777777777777666654332 366777
Q ss_pred ccccccccc-CCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCCCCCCCCCCCccc
Q 006886 146 DLSFNAFTG-NIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV 215 (627)
Q Consensus 146 ~ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~ 215 (627)
+|++|.+++ .+|..+..+++|+.|++++|++++..|.. .+++|+.|++++|++++..+..+..+++|+.+
T Consensus 156 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 228 (306)
T 2z66_A 156 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVL 228 (306)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEE
T ss_pred ECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEe
Confidence 777777665 45666666777777777777776655543 56667777777777665555556656665554
No 286
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.68 E-value=3.1e-17 Score=183.83 Aligned_cols=144 Identities=18% Similarity=0.157 Sum_probs=125.4
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhh-c-ccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFR-S-LQLNALD 146 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~-~-~~L~~L~ 146 (627)
..++.|||++|+|+ .+|+..|.++++|+.|||++|+|++..|..|.+|++|++|+|++|+|+++++..+ . .+|++|+
T Consensus 52 ~~~~~LdLs~N~i~-~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~ 130 (635)
T 4g8a_A 52 FSTKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 130 (635)
T ss_dssp TTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEE
T ss_pred cCCCEEEeeCCCCC-CCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEE
Confidence 57999999999999 5666589999999999999999998778889999999999999999999988644 3 3899999
Q ss_pred ccccccccCCccccccccccccccccCCccccc-CCCC--CCCccceeeccCCCccccCCCCCCCCCCCc
Q 006886 147 LSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGA-IPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSS 213 (627)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~ 213 (627)
|++|+|++..+..|+++++|++|++++|++++. +|.. .+++|++|++++|++++..|..+..+.++.
T Consensus 131 Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~ 200 (635)
T 4g8a_A 131 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMP 200 (635)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCT
T ss_pred CCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhh
Confidence 999999976667899999999999999999864 3443 789999999999999988888776655544
No 287
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.67 E-value=1.3e-16 Score=171.35 Aligned_cols=155 Identities=23% Similarity=0.247 Sum_probs=120.1
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCC-------------------------CCCcccccEE
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSD-------------------------ITSISSLQYV 123 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~-------------------------~~~l~~L~~L 123 (627)
.+++.|+|++|+++ .+|+..|..+++|+.|+|++|.|++..+.. |..+++|++|
T Consensus 123 ~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L 201 (452)
T 3zyi_A 123 ASLNTLELFDNWLT-VIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYL 201 (452)
T ss_dssp TTCCEEECCSSCCS-BCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEE
T ss_pred ccCCEEECCCCcCC-ccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEE
Confidence 57888999999888 455547888888888888888887544434 4455566666
Q ss_pred eeecccccccCchhhc-cccccccccccccccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccc
Q 006886 124 YLQNNYFSGVLPAFRS-LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNG 200 (627)
Q Consensus 124 ~l~~N~l~~~~~~~~~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~ 200 (627)
+|++|++++.+ .+.. .+|+.|+|++|.|++..|..|.++++|+.|+|++|++++..+.. .+++|+.|+|++|+|++
T Consensus 202 ~L~~n~l~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 280 (452)
T 3zyi_A 202 NLGMCNIKDMP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSS 280 (452)
T ss_dssp ECTTSCCSSCC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred ECCCCcccccc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCc
Confidence 66666666553 2322 37889999999999888889999999999999999999877754 78999999999999997
Q ss_pred cCCCCCCCCCCCcc---cCCCcCCCCCC
Q 006886 201 SIPDSLQTFPNSSF---VGNSMLCGLPL 225 (627)
Q Consensus 201 ~~p~~~~~~~~l~~---~~n~~~~~~~~ 225 (627)
..+..+..+++|+. .+|++.|+|.+
T Consensus 281 ~~~~~~~~l~~L~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 281 LPHDLFTPLRYLVELHLHHNPWNCDCDI 308 (452)
T ss_dssp CCTTSSTTCTTCCEEECCSSCEECSTTT
T ss_pred cChHHhccccCCCEEEccCCCcCCCCCc
Confidence 77777777776654 47899998765
No 288
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.67 E-value=1.2e-16 Score=171.09 Aligned_cols=156 Identities=24% Similarity=0.269 Sum_probs=114.7
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcc-------------------------cccE
Q 006886 68 RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSIS-------------------------SLQY 122 (627)
Q Consensus 68 ~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~-------------------------~L~~ 122 (627)
-.+++.|+|++|+++ .+|+..|..+++|+.|+|++|.|++..+..|..++ +|++
T Consensus 111 l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~ 189 (440)
T 3zyj_A 111 LANLNTLELFDNRLT-TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRY 189 (440)
T ss_dssp CSSCCEEECCSSCCS-SCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCE
T ss_pred CccCCEEECCCCcCC-eeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCe
Confidence 357888899888888 45555788888888888888888755554454444 4555
Q ss_pred EeeecccccccCchhhc-cccccccccccccccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCcc
Q 006886 123 VYLQNNYFSGVLPAFRS-LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLN 199 (627)
Q Consensus 123 L~l~~N~l~~~~~~~~~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~ 199 (627)
|+|++|+++.++ .+.. .+|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|+|+
T Consensus 190 L~L~~n~l~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 268 (440)
T 3zyj_A 190 LNLAMCNLREIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT 268 (440)
T ss_dssp EECTTSCCSSCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCC
T ss_pred ecCCCCcCcccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCC
Confidence 555555555433 2222 36888888888888777888888888999999999888766654 7889999999999999
Q ss_pred ccCCCCCCCCCCCcc---cCCCcCCCCCC
Q 006886 200 GSIPDSLQTFPNSSF---VGNSMLCGLPL 225 (627)
Q Consensus 200 ~~~p~~~~~~~~l~~---~~n~~~~~~~~ 225 (627)
+..+..+..+++|+. .+|++.|+|.+
T Consensus 269 ~~~~~~~~~l~~L~~L~L~~Np~~CdC~l 297 (440)
T 3zyj_A 269 LLPHDLFTPLHHLERIHLHHNPWNCNCDI 297 (440)
T ss_dssp CCCTTTTSSCTTCCEEECCSSCEECSSTT
T ss_pred ccChhHhccccCCCEEEcCCCCccCCCCc
Confidence 777777777776654 47888898764
No 289
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.67 E-value=1.3e-16 Score=160.66 Aligned_cols=145 Identities=23% Similarity=0.218 Sum_probs=122.0
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhc-cccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALDL 147 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~L~l 147 (627)
..++.|+|++|++++..+. .|.++++|+.|+|++|.|++. |.. ..+++|++|+|++|+++.++..+.. .+|+.|+|
T Consensus 31 ~~l~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~l 107 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLA-TLMPYTRLTQLNLDRAELTKL-QVD-GTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDV 107 (290)
T ss_dssp TTCCEEECTTSCCSEEEGG-GGTTCTTCCEEECTTSCCCEE-ECC-SCCTTCCEEECCSSCCSSCCCCTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCcCCccCHH-HhhcCCCCCEEECCCCccCcc-cCC-CCCCcCCEEECCCCcCCcCchhhccCCCCCEEEC
Confidence 5789999999999865555 899999999999999999954 433 7899999999999999977665544 38999999
Q ss_pred cccccccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCCCCCCCCCCCcccC
Q 006886 148 SFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
++|+|++..|..|.++++|+.|+|++|+|++.++.. .+++|+.|+|++|+|++..+..+..+++|+.++
T Consensus 108 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~ 178 (290)
T 1p9a_G 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLL 178 (290)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEE
T ss_pred CCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEE
Confidence 999999777788999999999999999999766653 789999999999999965556678888887764
No 290
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.67 E-value=2e-16 Score=157.84 Aligned_cols=136 Identities=24% Similarity=0.309 Sum_probs=120.3
Q ss_pred CCCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhc--ccccc
Q 006886 67 NRSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNA 144 (627)
Q Consensus 67 ~~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~--~~L~~ 144 (627)
...+++.|+|++|++++. ++..|.++++|+.|+|++|.+++..|..|..+++|++|+|++|++++.++..+. .+|+.
T Consensus 83 ~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 161 (272)
T 3rfs_A 83 ELTNLTYLILTGNQLQSL-PNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTE 161 (272)
T ss_dssp TCTTCCEEECTTSCCCCC-CTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred CCCCCCEEECCCCccCcc-ChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCE
Confidence 346899999999999954 444799999999999999999987777899999999999999999999886543 48999
Q ss_pred ccccccccccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCC
Q 006886 145 LDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIP 203 (627)
Q Consensus 145 L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p 203 (627)
|+|++|++++..|..|..+++|+.|++++|++++.++.. .+++|+.|++++|++++..|
T Consensus 162 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 162 LDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred EECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 999999999877777899999999999999999877753 89999999999999987654
No 291
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.67 E-value=1.4e-16 Score=150.22 Aligned_cols=154 Identities=20% Similarity=0.236 Sum_probs=119.2
Q ss_pred CCCcceEeeCC---------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeec
Q 006886 57 SSWIGVTCNVN---------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQN 127 (627)
Q Consensus 57 ~~w~gv~C~~~---------~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 127 (627)
|.|..+.|+.. ...++.|+|++|++++..+...|+.+++|+.|+|++|.|++..|..|..+++|++|+|++
T Consensus 8 C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 36888888752 237899999999998655544589999999999999999988899999999999999999
Q ss_pred ccccccCchhh-c-cccccccccccccccCCccccccccccccccccCCcccccCCCCCCC-ccceeeccCCCccccCCC
Q 006886 128 NYFSGVLPAFR-S-LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLP-RLKILNFSNNNLNGSIPD 204 (627)
Q Consensus 128 N~l~~~~~~~~-~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~L~~L~l~~N~l~~~~p~ 204 (627)
|+|++.++..+ . .+|+.|+|++|+|++..|..|..+++|+.|+|++|.+++..+...+. .|+...+..+......|.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~ 167 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPS 167 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSST
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCCh
Confidence 99999988643 3 48999999999999888999999999999999999998765532111 133334445555555565
Q ss_pred CCCCCC
Q 006886 205 SLQTFP 210 (627)
Q Consensus 205 ~~~~~~ 210 (627)
.+....
T Consensus 168 ~l~~~~ 173 (192)
T 1w8a_A 168 KVRDVQ 173 (192)
T ss_dssp TTTTSB
T ss_pred HHcCCC
Confidence 555443
No 292
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.66 E-value=1e-16 Score=185.66 Aligned_cols=85 Identities=27% Similarity=0.333 Sum_probs=57.9
Q ss_pred ccccccccccccccCCccccccccccccccccCCcccccCCCCCCCccceeeccCCCccccCCCCCCCCCCCcccCCCcC
Q 006886 141 QLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVGNSML 220 (627)
Q Consensus 141 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~n~~~ 220 (627)
+|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++..-.++|+.|+|++|+|++.+|..+.++..+.+.+|++.
T Consensus 481 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~ 560 (844)
T 3j0a_A 481 HLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFI 560 (844)
T ss_dssp CEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCC
T ss_pred cccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCChhHhCCcCEEEecCCCcc
Confidence 35555555555555555556666666666666666665444443367777777777777777777777777888899999
Q ss_pred CCCCC
Q 006886 221 CGLPL 225 (627)
Q Consensus 221 ~~~~~ 225 (627)
|+|++
T Consensus 561 C~c~~ 565 (844)
T 3j0a_A 561 CECEL 565 (844)
T ss_dssp CSSSC
T ss_pred ccccc
Confidence 98875
No 293
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.66 E-value=1.1e-16 Score=172.09 Aligned_cols=155 Identities=22% Similarity=0.272 Sum_probs=130.3
Q ss_pred CcEEEEEcCCCCcccccCccccC---------------------------------------CCCcccEEEccCcccCcc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIG---------------------------------------KLDALKILSLRSNYLNGT 109 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~---------------------------------------~l~~L~~L~L~~N~l~~~ 109 (627)
.+++.|+|++|++++.+|. .+. ..++|+.|+|++|.+++.
T Consensus 212 ~~L~~L~Ls~n~l~~~~~~-~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 290 (455)
T 3v47_A 212 TSITTLDLSGNGFKESMAK-RFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFAL 290 (455)
T ss_dssp CEEEEEECTTSCCCHHHHH-HHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEE
T ss_pred ceeeeEecCCCcccccchh-hhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCcccccc
Confidence 5788999999988765543 221 126899999999999999
Q ss_pred CCCCCCCcccccEEeeecccccccCchhh-c-cccccccccccccccCCccccccccccccccccCCcccccCCCC--CC
Q 006886 110 LPSDITSISSLQYVYLQNNYFSGVLPAFR-S-LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NL 185 (627)
Q Consensus 110 ~p~~~~~l~~L~~L~l~~N~l~~~~~~~~-~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~ 185 (627)
.|..|..+++|++|+|++|++++.+|..+ . .+|+.|+|++|++++..|..|.++++|+.|+|++|++++..|.. .+
T Consensus 291 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 370 (455)
T 3v47_A 291 LKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGL 370 (455)
T ss_dssp CTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred chhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhcccc
Confidence 99999999999999999999999988543 3 48999999999999888889999999999999999999887754 89
Q ss_pred CccceeeccCCCccccCCCCCCCCCCCccc---CCCcCCCCC
Q 006886 186 PRLKILNFSNNNLNGSIPDSLQTFPNSSFV---GNSMLCGLP 224 (627)
Q Consensus 186 ~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~---~n~~~~~~~ 224 (627)
++|++|++++|++++..+..+..+++|+.+ +|+..|+++
T Consensus 371 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 371 PNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 999999999999997666677777777654 677777765
No 294
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.66 E-value=1.2e-16 Score=172.99 Aligned_cols=158 Identities=18% Similarity=0.163 Sum_probs=135.6
Q ss_pred CCcceEeeCC---------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecc
Q 006886 58 SWIGVTCNVN---------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNN 128 (627)
Q Consensus 58 ~w~gv~C~~~---------~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 128 (627)
.|..|.|... +..++.|+|++|++++..+. .|.++++|+.|+|++|.+++..|..|.++++|++|+|++|
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQD-EFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTT-TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHh-HccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 4778888742 35789999999999965555 8999999999999999999888999999999999999999
Q ss_pred cccccCchhh-c-cccccccccccccccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCCC
Q 006886 129 YFSGVLPAFR-S-LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPD 204 (627)
Q Consensus 129 ~l~~~~~~~~-~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~ 204 (627)
+++++++..+ . .+|+.|+|++|++++..|..|.++++|+.|++++|++++..+.. .+++|+.|++++|++++..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 9999888643 3 48999999999999888889999999999999999999876653 889999999999999866656
Q ss_pred CCCCCCCCcccC
Q 006886 205 SLQTFPNSSFVG 216 (627)
Q Consensus 205 ~~~~~~~l~~~~ 216 (627)
.+..+++|+.++
T Consensus 171 ~l~~l~~L~~L~ 182 (477)
T 2id5_A 171 ALSHLHGLIVLR 182 (477)
T ss_dssp HHTTCTTCCEEE
T ss_pred HhcccCCCcEEe
Confidence 677777776653
No 295
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.66 E-value=2e-16 Score=169.94 Aligned_cols=157 Identities=19% Similarity=0.183 Sum_probs=112.7
Q ss_pred CCcceEeeCC---------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecc
Q 006886 58 SWIGVTCNVN---------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNN 128 (627)
Q Consensus 58 ~w~gv~C~~~---------~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 128 (627)
.|..|.|... ..+++.|+|++|++++..|. .|.++++|+.|+|++|.|++..|..|.++++|++|+|++|
T Consensus 55 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~-~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 55 QFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQAD-TFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp SSCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTT-TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHH-HcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 3678888752 35799999999999965555 8999999999999999999888899999999999999999
Q ss_pred cccccCchhhc--cccccccccccccccCCccccccccccc-------------------------cccccCCcccccCC
Q 006886 129 YFSGVLPAFRS--LQLNALDLSFNAFTGNIPPGFQNLTRLH-------------------------LLNLQNNSISGAIP 181 (627)
Q Consensus 129 ~l~~~~~~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~-------------------------~L~l~~N~l~~~~p 181 (627)
+|+++++..+. .+|++|+|++|+|++..+..|.++++|+ .|+|++|+|++...
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~ 213 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPN 213 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCCC
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccccc
Confidence 99988886443 3799999999988854444555444444 44444555543211
Q ss_pred CCCCCccceeeccCCCccccCCCCCCCCCCCccc
Q 006886 182 PLNLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV 215 (627)
Q Consensus 182 ~~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~ 215 (627)
...+++|+.|+|++|++++..|..|.++++|+.+
T Consensus 214 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 247 (452)
T 3zyi_A 214 LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKL 247 (452)
T ss_dssp CTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEE
T ss_pred ccccccccEEECcCCcCcccCcccccCccCCCEE
Confidence 1245556666666666665555555555555544
No 296
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.65 E-value=1.6e-16 Score=146.29 Aligned_cols=133 Identities=24% Similarity=0.232 Sum_probs=115.4
Q ss_pred CcEEEEEcCCCCcc-cccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhc--cccccc
Q 006886 69 SRVIGIHLPGIGFT-GPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNAL 145 (627)
Q Consensus 69 ~~v~~l~l~~~~l~-~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~--~~L~~L 145 (627)
.+++.|+|++|+++ +.+|. .+..+++|+.|+|++|.|++. ..|..+++|++|+|++|++++.+|.... .+|+.|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~-~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEG-LTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSS-CCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred ccCCEEECCCCCCChhhHHH-HHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 67999999999998 88887 689999999999999999965 7899999999999999999997776544 489999
Q ss_pred cccccccccCC-ccccccccccccccccCCcccccCC----C-CCCCccceeeccCCCccccCCCC
Q 006886 146 DLSFNAFTGNI-PPGFQNLTRLHLLNLQNNSISGAIP----P-LNLPRLKILNFSNNNLNGSIPDS 205 (627)
Q Consensus 146 ~ls~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p----~-~~~~~L~~L~l~~N~l~~~~p~~ 205 (627)
+|++|.|++.. +..+..+++|+.|++++|++++..+ . ..+++|++|++++|.+. .+|+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~~ 165 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPDS 165 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCSS
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hcccc
Confidence 99999999632 2789999999999999999997665 1 28999999999999997 55543
No 297
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.65 E-value=1.1e-16 Score=168.42 Aligned_cols=165 Identities=15% Similarity=0.143 Sum_probs=125.7
Q ss_pred CCCCCCCCCCCCCcceEeeCC-------------------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccC
Q 006886 47 LNWNAAAPVCSSWIGVTCNVN-------------------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLN 107 (627)
Q Consensus 47 ~~W~~~~~~c~~w~gv~C~~~-------------------~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~ 107 (627)
.+|....+||+.|.+..|... -.+++.|+++++.++ .+|...|..+++|+.|+|++|.++
T Consensus 4 ~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~ 82 (390)
T 3o6n_A 4 KPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIE 82 (390)
T ss_dssp ---CCEECBCC------EEEESCEECSSCCCCEESCSSGGGCCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCC
T ss_pred CCCCCccceehhhhhhccceeeeeeecccccccccccccccCCceEEEecCCchh-hCChhHhcccccCcEEECCCCccc
Confidence 367766667766555555311 146788999999887 678767899999999999999999
Q ss_pred ccCCCCCCCcccccEEeeecccccccCchhh-c-cccccccccccccccCCccccccccccccccccCCcccccCCCC--
Q 006886 108 GTLPSDITSISSLQYVYLQNNYFSGVLPAFR-S-LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL-- 183 (627)
Q Consensus 108 ~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~-~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-- 183 (627)
+..|..|..+++|++|+|++|++++.+|..+ . .+|++|+|++|+++...+..|.++++|++|++++|++++..|..
T Consensus 83 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 162 (390)
T 3o6n_A 83 EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQ 162 (390)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTS
T ss_pred ccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhcc
Confidence 8778899999999999999999999988743 3 37999999999999544445789999999999999999877653
Q ss_pred CCCccceeeccCCCccccCCCCCCCCCCC
Q 006886 184 NLPRLKILNFSNNNLNGSIPDSLQTFPNS 212 (627)
Q Consensus 184 ~~~~L~~L~l~~N~l~~~~p~~~~~~~~l 212 (627)
.+++|+.|++++|++++.....+.++..+
T Consensus 163 ~l~~L~~L~l~~n~l~~~~~~~l~~L~~L 191 (390)
T 3o6n_A 163 ATTSLQNLQLSSNRLTHVDLSLIPSLFHA 191 (390)
T ss_dssp SCTTCCEEECCSSCCSBCCGGGCTTCSEE
T ss_pred CCCCCCEEECCCCcCCcccccccccccee
Confidence 88999999999999986533334333333
No 298
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.65 E-value=1.4e-16 Score=177.19 Aligned_cols=144 Identities=16% Similarity=0.169 Sum_probs=120.7
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhh-c-ccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFR-S-LQLNALD 146 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~-~-~~L~~L~ 146 (627)
.+++.|++++|.+. .+|+..|.++++|+.|+|++|.|++..|..|..+++|++|+|++|.+++.+|..+ . .+|++|+
T Consensus 51 ~~l~~l~l~~~~l~-~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 51 NNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp CCCSEEEESSCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCCCC-CcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 35678889998887 6777678999999999999999998888899999999999999999999988753 3 3899999
Q ss_pred ccccccccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCCCCCCCCCCCc
Q 006886 147 LSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSS 213 (627)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~ 213 (627)
|++|.|++..+..|+++++|++|+|++|+|++.+|.. .+++|+.|++++|.+++..+..+.++..|.
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~ 198 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHAN 198 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEE
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhh
Confidence 9999999655556799999999999999999877753 899999999999999976444444444433
No 299
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.64 E-value=1.7e-16 Score=155.17 Aligned_cols=157 Identities=13% Similarity=0.159 Sum_probs=121.9
Q ss_pred CCCCCcceE--eeC------CCCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcc-cCccCCCCCCCcccccEEee
Q 006886 55 VCSSWIGVT--CNV------NRSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNY-LNGTLPSDITSISSLQYVYL 125 (627)
Q Consensus 55 ~c~~w~gv~--C~~------~~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~l 125 (627)
.|..|.++. |.. -...++.|+|++|++++ +|+..|.++++|+.|+|++|. +++..+..|..+++|++|+|
T Consensus 9 ~C~~~~~~~v~c~~l~~ip~~~~~l~~L~l~~n~l~~-i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l 87 (239)
T 2xwt_C 9 ECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRT-IPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEI 87 (239)
T ss_dssp SEEECSTTEEEECSCSSCCCCCTTCCEEEEESCCCSE-ECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEE
T ss_pred eeCCCCcceeEccCccccCCCCCcccEEEEeCCcceE-ECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEEC
Confidence 343345544 854 23579999999999994 555589999999999999997 88666678999999999999
Q ss_pred ec-ccccccCchhh-c-cccccccccccccccCCccccccccccc---cccccCC-cccccCCCC--CCCccc-eeeccC
Q 006886 126 QN-NYFSGVLPAFR-S-LQLNALDLSFNAFTGNIPPGFQNLTRLH---LLNLQNN-SISGAIPPL--NLPRLK-ILNFSN 195 (627)
Q Consensus 126 ~~-N~l~~~~~~~~-~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~---~L~l~~N-~l~~~~p~~--~~~~L~-~L~l~~ 195 (627)
++ |+++++++..+ . .+|+.|+|++|++++ +|. |..+++|+ .|++++| ++++..+.. .+++|+ .|++++
T Consensus 88 ~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~ 165 (239)
T 2xwt_C 88 RNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYN 165 (239)
T ss_dssp EEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCS
T ss_pred CCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCC
Confidence 98 99998887543 3 389999999999995 776 88888887 9999999 888766543 788899 999999
Q ss_pred CCccccCCCCCCCCCCCccc
Q 006886 196 NNLNGSIPDSLQTFPNSSFV 215 (627)
Q Consensus 196 N~l~~~~p~~~~~~~~l~~~ 215 (627)
|+++ .+|......++|+.+
T Consensus 166 n~l~-~i~~~~~~~~~L~~L 184 (239)
T 2xwt_C 166 NGFT-SVQGYAFNGTKLDAV 184 (239)
T ss_dssp CCCC-EECTTTTTTCEEEEE
T ss_pred CCCc-ccCHhhcCCCCCCEE
Confidence 9998 555543333555544
No 300
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.64 E-value=6.3e-16 Score=159.02 Aligned_cols=144 Identities=19% Similarity=0.257 Sum_probs=118.0
Q ss_pred CCCcceEeeCC---------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeec
Q 006886 57 SSWIGVTCNVN---------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQN 127 (627)
Q Consensus 57 ~~w~gv~C~~~---------~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 127 (627)
|.|..+.|... ..+++.|+|++|++++..|. .|.++++|+.|+|++|.+++..|..|..+++|++|+|++
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKD-DFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTT-TTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHh-HhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 47999999752 24789999999999955444 899999999999999999988899999999999999999
Q ss_pred ccccccCchhhccccccccccccccccCCccccccccccccccccCCcccc--cCCCC--CCCccceeeccCCCccccCC
Q 006886 128 NYFSGVLPAFRSLQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISG--AIPPL--NLPRLKILNFSNNNLNGSIP 203 (627)
Q Consensus 128 N~l~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~--~~~~L~~L~l~~N~l~~~~p 203 (627)
|+++.+++... .+|++|++++|++++..+..|.++++|+.|++++|+++. ..+.. .+ +|+.|++++|.+++ +|
T Consensus 112 n~l~~l~~~~~-~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~ 188 (332)
T 2ft3_A 112 NHLVEIPPNLP-SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IP 188 (332)
T ss_dssp SCCCSCCSSCC-TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CC
T ss_pred CcCCccCcccc-ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cC
Confidence 99997766554 689999999999997666679999999999999999963 33432 33 67777777777764 44
Q ss_pred C
Q 006886 204 D 204 (627)
Q Consensus 204 ~ 204 (627)
.
T Consensus 189 ~ 189 (332)
T 2ft3_A 189 K 189 (332)
T ss_dssp S
T ss_pred c
Confidence 3
No 301
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.64 E-value=1.8e-16 Score=176.82 Aligned_cols=145 Identities=22% Similarity=0.221 Sum_probs=76.4
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCC-CCCCCcccccEEeeecccccccCchhhc--cccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLP-SDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNAL 145 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~~~--~~L~~L 145 (627)
.+++.|+|++|.+++ +|. .+..+++|+.|+|++|.+++..| ..|..+++|++|+|++|++.+.+|..+. .+|+.|
T Consensus 376 ~~L~~L~L~~n~l~~-~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 453 (606)
T 3vq2_A 376 NSLRHLDLSFNGAII-MSA-NFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTL 453 (606)
T ss_dssp SCCCEEECCSCSEEE-ECC-CCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred CcccEeECCCCcccc-chh-hccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEE
Confidence 345666666666553 443 45555555555555555555444 3555555555555555555555443222 245555
Q ss_pred ccccccccc-CCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCCCCCCCCCCCccc
Q 006886 146 DLSFNAFTG-NIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV 215 (627)
Q Consensus 146 ~ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~ 215 (627)
+|++|.+++ .+|..|..+++|+.|++++|++++.+|.. .+++|+.|++++|++++.+|..+..+++|+.+
T Consensus 454 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 526 (606)
T 3vq2_A 454 KMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTL 526 (606)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEE
T ss_pred ECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEE
Confidence 555555554 24445555555555555555555544432 45555555555555555445555555444443
No 302
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.62 E-value=1.2e-16 Score=173.12 Aligned_cols=147 Identities=21% Similarity=0.200 Sum_probs=105.1
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhc---cccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS---LQLNAL 145 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~---~~L~~L 145 (627)
..++.|+|++|.+++..+ ..+++|+.|+|++|.|++..|..|+.+++|++|+|++|.+++.+|..+. .+|+.|
T Consensus 99 ~~L~~L~L~~N~l~~~~~----~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L 174 (487)
T 3oja_A 99 PSIETLHAANNNISRVSC----SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHL 174 (487)
T ss_dssp TTCCEEECCSSCCCCEEE----CCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEE
T ss_pred CCcCEEECcCCcCCCCCc----cccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEE
Confidence 567777777777775433 2457788888888888877777788888888888888888887664332 378888
Q ss_pred cccccccccCCccccccccccccccccCCcccccCCCC-CCCccceeeccCCCccccCCCCCCCCCCCccc---CCCcCC
Q 006886 146 DLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL-NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV---GNSMLC 221 (627)
Q Consensus 146 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~---~n~~~~ 221 (627)
+|++|.|++. |. +..+++|+.|+|++|+|++.+|.. .+++|+.|+|++|.|++ +|..+..+++|..+ +|+..|
T Consensus 175 ~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c 251 (487)
T 3oja_A 175 NLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHC 251 (487)
T ss_dssp ECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCH
T ss_pred ecCCCccccc-cc-cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcC
Confidence 8888888854 33 335778888888888888765554 67788888888888874 66666666665543 566665
Q ss_pred C
Q 006886 222 G 222 (627)
Q Consensus 222 ~ 222 (627)
+
T Consensus 252 ~ 252 (487)
T 3oja_A 252 G 252 (487)
T ss_dssp H
T ss_pred c
Confidence 4
No 303
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.62 E-value=3.2e-16 Score=156.73 Aligned_cols=144 Identities=18% Similarity=0.136 Sum_probs=124.4
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhh-c-ccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFR-S-LQLNALD 146 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~-~-~~L~~L~ 146 (627)
..++.|+|++|++++..+ ..|.++++|+.|+|++|.+++..+..|..+++|++|+|++|++++.++..+ . .+|+.|+
T Consensus 28 ~~l~~L~ls~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGS-YSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (276)
T ss_dssp TTCCEEECTTCCCCEECT-TTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred CCccEEECCCCcccccCH-hHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEE
Confidence 469999999999995544 489999999999999999998778899999999999999999999987643 3 3899999
Q ss_pred ccccccccCCccccccccccccccccCCccccc-CCCC--CCCccceeeccCCCccccCCCCCCCCCCCc
Q 006886 147 LSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGA-IPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSS 213 (627)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~ 213 (627)
+++|.+++..+..+.++++|++|++++|++++. +|.. .+++|+.|++++|++++..+..+..++.+.
T Consensus 107 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 176 (276)
T 2z62_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMP 176 (276)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCT
T ss_pred CCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhcc
Confidence 999999977776899999999999999999873 4543 789999999999999987777776665554
No 304
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.62 E-value=1.4e-16 Score=180.49 Aligned_cols=177 Identities=22% Similarity=0.298 Sum_probs=89.4
Q ss_pred ChhHHHHHHHHHhhCCC---CCCCCCCCCCCCCCCCcceEeeCCCCcEEEEEcCCCCcccc-------------------
Q 006886 27 LNSDKQALLDFADAVPH---ARKLNWNAAAPVCSSWIGVTCNVNRSRVIGIHLPGIGFTGP------------------- 84 (627)
Q Consensus 27 ~~~~~~~l~~~~~~~~~---~~~~~W~~~~~~c~~w~gv~C~~~~~~v~~l~l~~~~l~~~------------------- 84 (627)
...+..+|+++...... .....|.....++.+|.++.++. ++++.|+|.+|++...
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~ 207 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST--PLTPKIELFANGKDEANQALLQHKKLSQYSIDEDD 207 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC--CccceEEeeCCCCCcchhhHhhcCccCcccccCcc
Confidence 34578899999877622 12235654444555799888865 5566666655554321
Q ss_pred -------cCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhcc-ccccccccccccccCC
Q 006886 85 -------IPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSL-QLNALDLSFNAFTGNI 156 (627)
Q Consensus 85 -------~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-~L~~L~ls~N~l~~~~ 156 (627)
+++..+..+++|+.|+|++|.|. .+|..+..+++|++|+|++|+|+.+++.+..+ +|+.|+|++|+|+ .+
T Consensus 208 ~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~-~l 285 (727)
T 4b8c_D 208 DIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLT-SL 285 (727)
T ss_dssp --------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCSCCCGGGGGGTTCCEEECTTSCCS-SC
T ss_pred ccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCcccChhhhCCCCCCEEeCcCCcCC-cc
Confidence 22335666777777777777776 66666667777777777777777444444443 6777777777777 56
Q ss_pred ccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCCCCCCC
Q 006886 157 PPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQT 208 (627)
Q Consensus 157 p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~ 208 (627)
|..|++|++|++|+|++|.|+ .+|.. .+++|+.|+|++|+|++.+|..+..
T Consensus 286 p~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 338 (727)
T 4b8c_D 286 PAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTE 338 (727)
T ss_dssp CSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHH
T ss_pred ChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhh
Confidence 777777777777777777776 34432 6677777777777777666665543
No 305
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.61 E-value=2.1e-16 Score=177.11 Aligned_cols=146 Identities=17% Similarity=0.330 Sum_probs=132.3
Q ss_pred CCcEEEEEcCCCCcccc-----------------cCccccC--CCCcccEEEccCcccCccCCCCCCCcccccEEeeecc
Q 006886 68 RSRVIGIHLPGIGFTGP-----------------IPANSIG--KLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNN 128 (627)
Q Consensus 68 ~~~v~~l~l~~~~l~~~-----------------~~~~~l~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 128 (627)
-.+++.|+|++|.++|. +|. .++ ++++|+.|+|++|.+.|.+|..|+++++|++|+|++|
T Consensus 205 l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~-~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n 283 (636)
T 4eco_A 205 LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTE-DLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACN 283 (636)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTS-CCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTC
T ss_pred ccCCCEEECcCCccccccccccccccccchhcccCch-hhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCC
Confidence 36799999999999996 998 788 9999999999999999999999999999999999999
Q ss_pred c-ccc-cCch-hhc-------cccccccccccccccCCcc--ccccccccccccccCCcccccCCCC-CCCccceeeccC
Q 006886 129 Y-FSG-VLPA-FRS-------LQLNALDLSFNAFTGNIPP--GFQNLTRLHLLNLQNNSISGAIPPL-NLPRLKILNFSN 195 (627)
Q Consensus 129 ~-l~~-~~~~-~~~-------~~L~~L~ls~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~L~~L~l~~ 195 (627)
+ ++| .+|. +.. .+|+.|+|++|+++ .+|. .++++++|+.|++++|+++|.+|.. .+++|+.|++++
T Consensus 284 ~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~~~l~~L~~L~L~~ 362 (636)
T 4eco_A 284 RGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLPAFGSEIKLASLNLAY 362 (636)
T ss_dssp TTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECCCCEEEEEESEEECCS
T ss_pred CCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchhhhCCCCCCCEEECCC
Confidence 8 998 6664 433 58999999999999 8998 9999999999999999999989854 789999999999
Q ss_pred CCccccCCCCCCCCCC-CcccC
Q 006886 196 NNLNGSIPDSLQTFPN-SSFVG 216 (627)
Q Consensus 196 N~l~~~~p~~~~~~~~-l~~~~ 216 (627)
|+++ .+|..+..+++ |+.++
T Consensus 363 N~l~-~lp~~l~~l~~~L~~L~ 383 (636)
T 4eco_A 363 NQIT-EIPANFCGFTEQVENLS 383 (636)
T ss_dssp SEEE-ECCTTSEEECTTCCEEE
T ss_pred Cccc-cccHhhhhhcccCcEEE
Confidence 9999 89988988888 87764
No 306
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.61 E-value=4.1e-16 Score=160.43 Aligned_cols=134 Identities=13% Similarity=0.121 Sum_probs=94.9
Q ss_pred hcccCcCCceeEEEEEecCCcEEEEEEeccccc---------------CHHHH--------HHHHHHHHHhccCCCeeee
Q 006886 339 AEVLGKGSYGSTYKAILEDGTTVVVKRLREVAA---------------TKREF--------EQQMEVVGTIGKHSNVVPV 395 (627)
Q Consensus 339 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~---------------~~~~~--------~~e~~~l~~l~~h~niv~l 395 (627)
.+.||+|+||.||+|...+|+.||||+++.... ..... .+|...+.++ .+.++...
T Consensus 100 ~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL-~~~gv~vp 178 (397)
T 4gyi_A 100 GSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKAL-YEEGFPVP 178 (397)
T ss_dssp EEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHH-HHTTCSCC
T ss_pred cCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH-HhcCCCCC
Confidence 468999999999999998999999998753210 11112 3345555555 33333211
Q ss_pred eeEEeeCCceEEEEecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCC
Q 006886 396 RAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDL 475 (627)
Q Consensus 396 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~ 475 (627)
.-+.. ...++||||++|++|..+... .....++.|++.+|.|||+.| ||||||||.|||+++++
T Consensus 179 ~p~~~--~~~~LVME~i~G~~L~~l~~~-----------~~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 179 EPIAQ--SRHTIVMSLVDALPMRQVSSV-----------PDPASLYADLIALILRLAKHG---LIHGDFNEFNILIREEK 242 (397)
T ss_dssp CEEEE--ETTEEEEECCSCEEGGGCCCC-----------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEEEEE
T ss_pred eeeec--cCceEEEEecCCccHhhhccc-----------HHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeCCC
Confidence 11111 233699999999888654321 123568899999999999998 99999999999999887
Q ss_pred C----------eEEeecccccccC
Q 006886 476 N----------GCISDVGLAHLIN 489 (627)
Q Consensus 476 ~----------~ki~DfG~a~~~~ 489 (627)
. +.|+||+-+....
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEETT
T ss_pred CcccccccccceEEEEeCCcccCC
Confidence 4 7899999876543
No 307
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.61 E-value=8.5e-16 Score=165.14 Aligned_cols=135 Identities=21% Similarity=0.249 Sum_probs=122.8
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhc--ccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNALD 146 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~--~~L~~L~ 146 (627)
..++.|+|++|++++.+|. .++.+++|+.|+|++|.+++..|..|..+++|++|+|++|++++.+|..+. .+|+.|+
T Consensus 275 ~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 353 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKS-VFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLD 353 (455)
T ss_dssp SCCCEEECCSSCCCEECTT-TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEE
T ss_pred cCceEEEecCccccccchh-hcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEE
Confidence 5799999999999987777 899999999999999999998899999999999999999999999886543 4899999
Q ss_pred ccccccccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCCC
Q 006886 147 LSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPD 204 (627)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~ 204 (627)
|++|++++..|..|.++++|++|++++|+|++.++.. .+++|+.|++++|++++..|.
T Consensus 354 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 354 LSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 9999999888999999999999999999999766543 899999999999999988773
No 308
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.61 E-value=1.2e-15 Score=156.64 Aligned_cols=141 Identities=17% Similarity=0.233 Sum_probs=109.8
Q ss_pred CCCcceEeeCC---------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeec
Q 006886 57 SSWIGVTCNVN---------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQN 127 (627)
Q Consensus 57 ~~w~gv~C~~~---------~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 127 (627)
|.|..+.|... ...++.|+|++|++++. ++..|.++++|+.|+|++|.+++..|..|..+++|++|+|++
T Consensus 31 c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 31 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEI-KDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp EETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCB-CTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEe-ChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 47999999742 35789999999999954 444899999999999999999988899999999999999999
Q ss_pred ccccccCchhhccccccccccccccccCCccccccccccccccccCCcccc--cCCCC--CCCccceeeccCCCcc
Q 006886 128 NYFSGVLPAFRSLQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISG--AIPPL--NLPRLKILNFSNNNLN 199 (627)
Q Consensus 128 N~l~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~--~~~~L~~L~l~~N~l~ 199 (627)
|+++.++.... .+|+.|++++|.+++..+..|.++++|+.|++++|+++. ..+.. .+++|+.|++++|.++
T Consensus 110 n~l~~l~~~~~-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 110 NQLKELPEKMP-KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT 184 (330)
T ss_dssp SCCSBCCSSCC-TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC
T ss_pred CcCCccChhhc-ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc
Confidence 99997655443 578888888888886666667777777777777777753 33322 5566666666666665
No 309
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.61 E-value=5e-16 Score=173.34 Aligned_cols=154 Identities=16% Similarity=0.115 Sum_probs=134.2
Q ss_pred CcceEeeCC---------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeeccc
Q 006886 59 WIGVTCNVN---------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNY 129 (627)
Q Consensus 59 w~gv~C~~~---------~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 129 (627)
+..|.|... +..++.|+|++|++++..|. .|+++++|+.|+|++|.+++..|..|.++++|++|+|++|+
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNT-TFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANP 92 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTT-TSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChh-HhccCccceEEECCCCccceeChhhccCccccCeeeCCCCc
Confidence 456777542 35799999999999965555 89999999999999999999899999999999999999999
Q ss_pred ccccCchhh-c-cccccccccccccccCCccccccccccccccccCCccccc-CCCC-CCCccceeeccCCCccccCCCC
Q 006886 130 FSGVLPAFR-S-LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGA-IPPL-NLPRLKILNFSNNNLNGSIPDS 205 (627)
Q Consensus 130 l~~~~~~~~-~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~-~~~~L~~L~l~~N~l~~~~p~~ 205 (627)
+.+..|..+ . .+|++|+|++|++++..|..|.++++|++|++++|++++. +|.. .+++|+.|++++|.+++..|..
T Consensus 93 l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 172 (606)
T 3t6q_A 93 LIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKED 172 (606)
T ss_dssp CSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHH
T ss_pred ccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhh
Confidence 999988544 3 3899999999999976688899999999999999999974 3443 7999999999999999888888
Q ss_pred CCCCCCCc
Q 006886 206 LQTFPNSS 213 (627)
Q Consensus 206 ~~~~~~l~ 213 (627)
+..+++|+
T Consensus 173 ~~~l~~L~ 180 (606)
T 3t6q_A 173 MSSLQQAT 180 (606)
T ss_dssp HHTTTTCC
T ss_pred hhhhcccc
Confidence 88887776
No 310
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.60 E-value=2.2e-15 Score=139.94 Aligned_cols=126 Identities=22% Similarity=0.247 Sum_probs=103.1
Q ss_pred EEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhh-c-cccccccccccc
Q 006886 74 IHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFR-S-LQLNALDLSFNA 151 (627)
Q Consensus 74 l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~-~-~~L~~L~ls~N~ 151 (627)
+++++++++ .+|. . ..++|+.|+|++|++++..+..|..+++|++|+|++|+++++++..+ . .+|+.|+|++|+
T Consensus 12 l~~~~~~l~-~~p~-~--~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 87 (177)
T 2o6r_A 12 IRCNSKGLT-SVPT-G--IPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENK 87 (177)
T ss_dssp EECCSSCCS-SCCT-T--CCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEecCCCCc-cCCC-C--CCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCC
Confidence 333445665 4665 2 24789999999999997767778999999999999999998888643 3 389999999999
Q ss_pred cccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCC
Q 006886 152 FTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIP 203 (627)
Q Consensus 152 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p 203 (627)
|++..+..|..+++|+.|++++|+|++.++.. .+++|+.|++++|++++..|
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 88 LQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 99776677899999999999999999766543 68999999999999987655
No 311
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.60 E-value=1.1e-15 Score=168.84 Aligned_cols=154 Identities=25% Similarity=0.319 Sum_probs=123.6
Q ss_pred CCCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCc--cCCCCCCCcccccEEeeecccccccCc-hhh-c-cc
Q 006886 67 NRSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNG--TLPSDITSISSLQYVYLQNNYFSGVLP-AFR-S-LQ 141 (627)
Q Consensus 67 ~~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~-~-~~ 141 (627)
...+++.|+|++|.+++.+|. .++++++|+.|+|++|++++ .+|..|..+++|++|+|++|++++.+| ..+ . .+
T Consensus 351 ~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 351 SPSSFTFLNFTQNVFTDSVFQ-GCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SCCCCCEEECCSSCCCTTTTT-TCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred CCCCceEEECCCCccccchhh-hhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 346799999999999987877 78999999999999999986 335678899999999999999998444 322 2 47
Q ss_pred cccccccccccccCCccccccccccccccccCCcccccCCC-C-CCCccceeeccCCCccccCCCC-CCCCCCCcc---c
Q 006886 142 LNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPP-L-NLPRLKILNFSNNNLNGSIPDS-LQTFPNSSF---V 215 (627)
Q Consensus 142 L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~-~~~~L~~L~l~~N~l~~~~p~~-~~~~~~l~~---~ 215 (627)
|+.|+|++|++++.+|..+. ++|+.|++++|+|+. +|. . .+++|+.|+|++|+|+ .+|.. +..+++|+. .
T Consensus 430 L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~-ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~ 505 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMS-IPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLH 505 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCC-CCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECC
T ss_pred CCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcc-cChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEec
Confidence 99999999999887776654 689999999999984 554 3 8899999999999999 56665 777776665 4
Q ss_pred CCCcCCCCCC
Q 006886 216 GNSMLCGLPL 225 (627)
Q Consensus 216 ~n~~~~~~~~ 225 (627)
+|++.|++++
T Consensus 506 ~N~~~c~c~~ 515 (562)
T 3a79_B 506 DNPWDCTCPG 515 (562)
T ss_dssp SCCBCCCHHH
T ss_pred CCCcCCCcch
Confidence 6888887653
No 312
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.60 E-value=5.4e-16 Score=139.68 Aligned_cols=124 Identities=23% Similarity=0.259 Sum_probs=103.5
Q ss_pred CcEEEEEcCCCCcc-cccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhc--cccccc
Q 006886 69 SRVIGIHLPGIGFT-GPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNAL 145 (627)
Q Consensus 69 ~~v~~l~l~~~~l~-~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~--~~L~~L 145 (627)
.+++.|++++|+++ +.+|. .+..+++|+.|+|++|.+++. ..+..+++|++|+|++|++++.+|.... .+|+.|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~-~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEG-LTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCS-CCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred ccCeEEEccCCcCChhHHHH-HHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 57889999999998 78887 789999999999999999865 7788999999999999999997666543 479999
Q ss_pred cccccccccC-CccccccccccccccccCCcccccCC---CC--CCCccceeeccC
Q 006886 146 DLSFNAFTGN-IPPGFQNLTRLHLLNLQNNSISGAIP---PL--NLPRLKILNFSN 195 (627)
Q Consensus 146 ~ls~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p---~~--~~~~L~~L~l~~ 195 (627)
++++|.+++. .|..+..+++|+.|++++|++++..+ .. .+++|+.|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999999863 34788899999999999999987655 12 788888888764
No 313
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.60 E-value=2.2e-15 Score=142.00 Aligned_cols=123 Identities=27% Similarity=0.321 Sum_probs=106.0
Q ss_pred EEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhh-c-ccccccccccc
Q 006886 73 GIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFR-S-LQLNALDLSFN 150 (627)
Q Consensus 73 ~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~-~-~~L~~L~ls~N 150 (627)
.+++++++++ .+|. .+ .++|+.|+|++|.|+ .+|..|..+++|++|+|++|+|+++.+..+ . .+|+.|+|++|
T Consensus 14 ~l~~~~~~l~-~ip~-~~--~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPK-GI--PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EEECTTSCCS-SCCS-CC--CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEcCCCCCC-cCCC-CC--CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 5788888888 7887 33 368999999999998 788999999999999999999999988643 3 38999999999
Q ss_pred ccccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccc
Q 006886 151 AFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNG 200 (627)
Q Consensus 151 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~ 200 (627)
+|++..|..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|++..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 999877788999999999999999999766543 78999999999999874
No 314
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.60 E-value=8e-16 Score=156.62 Aligned_cols=143 Identities=17% Similarity=0.176 Sum_probs=98.4
Q ss_pred CcEEEEEcCCCCcccccCc---cccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeeccccccc---Cchh--hc-
Q 006886 69 SRVIGIHLPGIGFTGPIPA---NSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGV---LPAF--RS- 139 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~---~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~---~~~~--~~- 139 (627)
.+++.|+|++|.+++..+. ..+..+++|+.|+|++|.+++..|..|..+++|++|+|++|++.+. ++.. ..
T Consensus 117 ~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l 196 (310)
T 4glp_A 117 LALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKF 196 (310)
T ss_dssp BCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSS
T ss_pred CCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcC
Confidence 5678888888888865541 2445788888888888888877777888888888888888887652 2222 12
Q ss_pred cccccccccccccccCCcc----ccccccccccccccCCcccccCCCC--C---CCccceeeccCCCccccCCCCCCCCC
Q 006886 140 LQLNALDLSFNAFTGNIPP----GFQNLTRLHLLNLQNNSISGAIPPL--N---LPRLKILNFSNNNLNGSIPDSLQTFP 210 (627)
Q Consensus 140 ~~L~~L~ls~N~l~~~~p~----~~~~l~~L~~L~l~~N~l~~~~p~~--~---~~~L~~L~l~~N~l~~~~p~~~~~~~ 210 (627)
.+|++|+|++|+++ .+|. .+.++++|++|+|++|+|++..|.. . +++|+.|+|++|+|+ .+|..+. +
T Consensus 197 ~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~ 272 (310)
T 4glp_A 197 PAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--A 272 (310)
T ss_dssp CCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--S
T ss_pred CCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--C
Confidence 36888888888886 3443 2466778888888888888765532 3 368888888888887 5666553 3
Q ss_pred CCccc
Q 006886 211 NSSFV 215 (627)
Q Consensus 211 ~l~~~ 215 (627)
+|+.+
T Consensus 273 ~L~~L 277 (310)
T 4glp_A 273 KLRVL 277 (310)
T ss_dssp CCSCE
T ss_pred CCCEE
Confidence 44443
No 315
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.60 E-value=4.6e-16 Score=173.62 Aligned_cols=145 Identities=18% Similarity=0.186 Sum_probs=104.0
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCC-CCCcccccEEeeecccccccCchhhc--cccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSD-ITSISSLQYVYLQNNYFSGVLPAFRS--LQLNAL 145 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~~~~~~--~~L~~L 145 (627)
.+++.|+|++|.+.+..|. .|..+++|+.|+|++|.+++..|.. |..+++|++|+|++|.+.+.+|..+. .+|+.|
T Consensus 376 ~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 454 (606)
T 3t6q_A 376 SHLQSLNLSYNEPLSLKTE-AFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHL 454 (606)
T ss_dssp TTCCEEECCSCSCEEECTT-TTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEE
T ss_pred CCCCEEECCCCcCCcCCHH-HhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEE
Confidence 5677888888888765555 6777888888888888877665544 77778888888888887777665332 367777
Q ss_pred cccccccccC---CccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCCCCCCCCCCCccc
Q 006886 146 DLSFNAFTGN---IPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV 215 (627)
Q Consensus 146 ~ls~N~l~~~---~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~ 215 (627)
+|++|.+++. .+..+..+++|+.|++++|++++.+|.. .+++|+.|++++|++++..|..+..++.| .+
T Consensus 455 ~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L 528 (606)
T 3t6q_A 455 NLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YL 528 (606)
T ss_dssp ECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EE
T ss_pred ECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EE
Confidence 7777777752 2345777777777777777777766543 67777777777777777777777777766 44
No 316
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.59 E-value=2.9e-16 Score=160.09 Aligned_cols=107 Identities=20% Similarity=0.232 Sum_probs=46.0
Q ss_pred cEEEEEcCCCCcccccCcccc-CCCCcccEEEccCcccCccCCCCCCCc-----ccccEEeeecccccccCchhh-c-cc
Q 006886 70 RVIGIHLPGIGFTGPIPANSI-GKLDALKILSLRSNYLNGTLPSDITSI-----SSLQYVYLQNNYFSGVLPAFR-S-LQ 141 (627)
Q Consensus 70 ~v~~l~l~~~~l~~~~~~~~l-~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~~~~~-~-~~ 141 (627)
+++.|+|++|++++.+|...+ ..+++|+.|+|++|.+++. |..+..+ ++|++|+|++|++.+.++..+ . .+
T Consensus 96 ~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 174 (312)
T 1wwl_A 96 GLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPA 174 (312)
T ss_dssp CCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSS
T ss_pred CccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCC
Confidence 344444444444444444211 4444444444444444433 4444433 444444444444444443221 1 14
Q ss_pred cccccccccccccC--Ccccc--ccccccccccccCCccc
Q 006886 142 LNALDLSFNAFTGN--IPPGF--QNLTRLHLLNLQNNSIS 177 (627)
Q Consensus 142 L~~L~ls~N~l~~~--~p~~~--~~l~~L~~L~l~~N~l~ 177 (627)
|+.|+|++|++++. +|..+ ..+++|++|++++|+|+
T Consensus 175 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 214 (312)
T 1wwl_A 175 LSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGME 214 (312)
T ss_dssp CCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCC
T ss_pred CCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCc
Confidence 44444444444432 12222 44444444444444444
No 317
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.59 E-value=1.7e-15 Score=150.18 Aligned_cols=138 Identities=17% Similarity=0.274 Sum_probs=117.4
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhcccccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQLNALDLS 148 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~ls 148 (627)
.+++.|++++|+++ .++ .+..+++|+.|+|++|.|++..| +..+++|++|+|++|++++.++... .+|+.|+|+
T Consensus 41 ~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~l~~~~~-~~L~~L~L~ 114 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQ-SLA--GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKNLNGIPS-ACLSRLFLD 114 (263)
T ss_dssp TTCSEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSCCTTCCC-SSCCEEECC
T ss_pred CcCcEEECcCCCcc-cch--HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCCcCcccc-CcccEEEcc
Confidence 57899999999998 566 58999999999999999996544 9999999999999999998765433 789999999
Q ss_pred ccccccCCccccccccccccccccCCcccccCCCCCCCccceeeccCCCccccCCCCCCCCCCCcccC
Q 006886 149 FNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 149 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
+|+|++ +| .+.++++|+.|++++|+|++..+-..+++|+.|++++|++++. ..+..+++|+.++
T Consensus 115 ~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~~~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~ 178 (263)
T 1xeu_A 115 NNELRD-TD-SLIHLKNLEILSIRNNKLKSIVMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWID 178 (263)
T ss_dssp SSCCSB-SG-GGTTCTTCCEEECTTSCCCBCGGGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEE
T ss_pred CCccCC-Ch-hhcCcccccEEECCCCcCCCChHHccCCCCCEEECCCCcCcch--HHhccCCCCCEEe
Confidence 999996 44 5999999999999999999754333899999999999999966 6677777777653
No 318
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.59 E-value=1.5e-15 Score=170.06 Aligned_cols=157 Identities=22% Similarity=0.274 Sum_probs=134.6
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeeccccc-ccCchhh-c-cccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFS-GVLPAFR-S-LQLNAL 145 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-~~~~~~~-~-~~L~~L 145 (627)
..++.+++.+++.....+...+..+++|+.++++.|.+.+..|..+..+++|++|+|++|++. +.+|..+ . .+|+.|
T Consensus 420 ~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L 499 (635)
T 4g8a_A 420 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 499 (635)
T ss_dssp TTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred ccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEE
Confidence 457778888888777777667899999999999999999999999999999999999999854 4555533 3 389999
Q ss_pred cccccccccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCCCCCCCC-CCCcc---cCCCc
Q 006886 146 DLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTF-PNSSF---VGNSM 219 (627)
Q Consensus 146 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~~-~~l~~---~~n~~ 219 (627)
+|++|+|++..|..|.++++|+.|+|++|+|++..|.. .+++|+.|+|++|+|++..|..+..+ ++|+. -+|++
T Consensus 500 ~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~ 579 (635)
T 4g8a_A 500 DLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 579 (635)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCB
T ss_pred ECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCC
Confidence 99999999988999999999999999999999877753 89999999999999999999988776 45554 57999
Q ss_pred CCCCCC
Q 006886 220 LCGLPL 225 (627)
Q Consensus 220 ~~~~~~ 225 (627)
.|+|.+
T Consensus 580 ~C~C~~ 585 (635)
T 4g8a_A 580 ACTCEH 585 (635)
T ss_dssp CCSGGG
T ss_pred cccCCc
Confidence 998764
No 319
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.59 E-value=9.6e-16 Score=177.45 Aligned_cols=149 Identities=22% Similarity=0.225 Sum_probs=123.3
Q ss_pred CCcceEeeCCCCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccC-CCCCCCcccccEEeeecccccccCch
Q 006886 58 SWIGVTCNVNRSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTL-PSDITSISSLQYVYLQNNYFSGVLPA 136 (627)
Q Consensus 58 ~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~~~ 136 (627)
+|..|.+ .+.+++.|+|++|.+++..|. .|.++++|+.|+|++|.+.+.+ |..|.++++|++|+|++|++.+..|.
T Consensus 15 ~L~~vP~--lp~~l~~LdLs~N~i~~i~~~-~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 15 NLTQVPQ--VLNTTERLLLSFNYIRTVTAS-SFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CSSCCCS--SCTTCCEEEEESCCCCEECSS-SCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCC--CCCCcCEEECCCCcCCccChh-HCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 5777777 457899999999999866665 8999999999999999666666 77899999999999999999998775
Q ss_pred hh-cc-ccccccccccccccCCccc--cccccccccccccCCcccccCCC---CCCCccceeeccCCCccccCCCCCCCC
Q 006886 137 FR-SL-QLNALDLSFNAFTGNIPPG--FQNLTRLHLLNLQNNSISGAIPP---LNLPRLKILNFSNNNLNGSIPDSLQTF 209 (627)
Q Consensus 137 ~~-~~-~L~~L~ls~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~~p~---~~~~~L~~L~l~~N~l~~~~p~~~~~~ 209 (627)
.+ .. +|++|+|++|.+++.+|.. |.++++|++|+|++|++++..+. .++++|++|+|++|.+++..|..+..+
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l 171 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHH
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccc
Confidence 43 33 8999999999999866665 88999999999999999886653 278999999999999988887776544
No 320
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.59 E-value=1.6e-15 Score=140.94 Aligned_cols=124 Identities=23% Similarity=0.301 Sum_probs=107.2
Q ss_pred CCCcceEeeCC---------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeec
Q 006886 57 SSWIGVTCNVN---------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQN 127 (627)
Q Consensus 57 ~~w~gv~C~~~---------~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 127 (627)
|+|.++.|... ...++.|+|++|++++ +|+..|..+++|+.|+|++|.|++..+..|..+++|++|+|++
T Consensus 7 C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 7 CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQS-LPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp EETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCC-CCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred eCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccE-eCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 47999999752 2579999999999994 5554789999999999999999977677789999999999999
Q ss_pred ccccccCchhhc--cccccccccccccccCCccccccccccccccccCCcccccCC
Q 006886 128 NYFSGVLPAFRS--LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIP 181 (627)
Q Consensus 128 N~l~~~~~~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 181 (627)
|+|++.++..+. .+|+.|+|++|+|++..+..|..+++|+.|++++|.+++..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 999999886543 489999999999997666667889999999999999997655
No 321
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.59 E-value=3e-15 Score=160.15 Aligned_cols=156 Identities=21% Similarity=0.214 Sum_probs=100.4
Q ss_pred CCcceEeeCC---------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecc
Q 006886 58 SWIGVTCNVN---------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNN 128 (627)
Q Consensus 58 ~w~gv~C~~~---------~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 128 (627)
.|..|.|... ...++.|+|++|++++..+. .|.++++|+.|+|++|.|++..|..|.++++|++|+|++|
T Consensus 44 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~-~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 44 QFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVN-SFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp TSCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTT-TTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHH-HhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 3667888642 24577888888888854444 7888888888888888888766677888888888888888
Q ss_pred cccccCchhh-c-cccccccccccccccCCccccccccccccccc-------------------------cCCcccccCC
Q 006886 129 YFSGVLPAFR-S-LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNL-------------------------QNNSISGAIP 181 (627)
Q Consensus 129 ~l~~~~~~~~-~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l-------------------------~~N~l~~~~p 181 (627)
+|+++++..+ . .+|+.|+|++|.|++..+..|.++++|+.|++ ++|+|+. +|
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~ 201 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP 201 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc
Confidence 8887776433 2 36777777777776544434444444444444 4444442 22
Q ss_pred CC-CCCccceeeccCCCccccCCCCCCCCCCCccc
Q 006886 182 PL-NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV 215 (627)
Q Consensus 182 ~~-~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~ 215 (627)
.. .+++|+.|+|++|++++..|..|..+++|+.+
T Consensus 202 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 236 (440)
T 3zyj_A 202 NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKL 236 (440)
T ss_dssp CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ccCCCcccCEEECCCCccCccChhhhccCccCCEE
Confidence 22 45555566666666655555555555555544
No 322
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.59 E-value=1.2e-15 Score=166.97 Aligned_cols=151 Identities=26% Similarity=0.352 Sum_probs=103.3
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCc--cCCCCCCCcccccEEeeecccccccCc-h-hhc-cccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNG--TLPSDITSISSLQYVYLQNNYFSGVLP-A-FRS-LQLN 143 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~~-~-~~~-~~L~ 143 (627)
..++.|+|++|.+++.+|. .++.+++|+.|+|++|++++ .+|..+..+++|++|+|++|++++.+| . +.. .+|+
T Consensus 324 ~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 324 SPFLHLDFSNNLLTDTVFE-NCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCEEECCSSCCCTTTTT-TCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CcccEEEeECCccChhhhh-hhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 5677777777777776666 67777777777777777775 455667777777777777777777333 2 222 3677
Q ss_pred cccccccccccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCCCC-CCCCCCCccc---CC
Q 006886 144 ALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDS-LQTFPNSSFV---GN 217 (627)
Q Consensus 144 ~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~~-~~~~~~l~~~---~n 217 (627)
.|+|++|++++.+|..+. ++|+.|++++|+|+ .+|.. .+++|+.|++++|+++ .+|.. +..+++|+.+ +|
T Consensus 403 ~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N 478 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTN 478 (520)
T ss_dssp EEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSS
T ss_pred EEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCC
Confidence 777777777766666554 57777788888777 45532 6777888888888887 45554 6666665543 56
Q ss_pred CcCCCCC
Q 006886 218 SMLCGLP 224 (627)
Q Consensus 218 ~~~~~~~ 224 (627)
+..|+++
T Consensus 479 ~~~c~c~ 485 (520)
T 2z7x_B 479 PWDCSCP 485 (520)
T ss_dssp CBCCCHH
T ss_pred CCcccCC
Confidence 6666544
No 323
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.59 E-value=2.4e-15 Score=170.22 Aligned_cols=154 Identities=19% Similarity=0.278 Sum_probs=111.2
Q ss_pred EEEEEcCCCCcc--cccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCch---------hhc
Q 006886 71 VIGIHLPGIGFT--GPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPA---------FRS 139 (627)
Q Consensus 71 v~~l~l~~~~l~--~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~---------~~~ 139 (627)
++.|++++|.+. +.+|. .|.++++|+.|+|++|+|++..|..|..+++|++|+|++|++++..+. +..
T Consensus 456 L~~L~l~~n~l~~~~~~p~-~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~ 534 (680)
T 1ziw_A 456 LQRLMLRRVALKNVDSSPS-PFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKG 534 (680)
T ss_dssp CCEEECTTSCCBCTTCSSC-TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTT
T ss_pred cccchhccccccccccCCc-ccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcC
Confidence 444444444443 34555 677888888888888888876667788888888888888888775321 222
Q ss_pred -cccccccccccccccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCCCCC----CCCCCC
Q 006886 140 -LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSL----QTFPNS 212 (627)
Q Consensus 140 -~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~~~----~~~~~l 212 (627)
.+|+.|+|++|+|+...+..|.++++|+.|+|++|+|++.++.. .+++|+.|++++|++++..|..+ .++..+
T Consensus 535 l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l 614 (680)
T 1ziw_A 535 LSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTEL 614 (680)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEE
T ss_pred CCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEE
Confidence 36888888888888433346888889999999999998655543 77889999999999987666543 455556
Q ss_pred cccCCCcCCCCCC
Q 006886 213 SFVGNSMLCGLPL 225 (627)
Q Consensus 213 ~~~~n~~~~~~~~ 225 (627)
...+|++.|+|+.
T Consensus 615 ~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 615 DMRFNPFDCTCES 627 (680)
T ss_dssp ECTTCCCCBCCCC
T ss_pred EccCCCcccCCcc
Confidence 6668899888764
No 324
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.58 E-value=7.9e-16 Score=156.79 Aligned_cols=142 Identities=20% Similarity=0.198 Sum_probs=110.1
Q ss_pred CcEEEEEcCCCCcccccCccccCCC-----CcccEEEccCcccCccCCCCCCCcccccEEeeecccccccC---chh--h
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKL-----DALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVL---PAF--R 138 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~---~~~--~ 138 (627)
.+++.|+|++|++++. |. .++.+ ++|+.|+|++|+|++..|..|+.+++|++|+|++|++.+.. +.+ .
T Consensus 121 ~~L~~L~Ls~N~l~~~-~~-~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 121 PDLNILNLRNVSWATR-DA-WLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp CCCSEEEEESCBCSSS-SS-HHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCccEEEccCCCCcch-hH-HHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 6789999999999876 65 67766 89999999999999877788999999999999999987752 222 2
Q ss_pred c-ccccccccccccccc--CCc-cccccccccccccccCCcccccCCCC---CCCccceeeccCCCccccCCCCCCCCCC
Q 006886 139 S-LQLNALDLSFNAFTG--NIP-PGFQNLTRLHLLNLQNNSISGAIPPL---NLPRLKILNFSNNNLNGSIPDSLQTFPN 211 (627)
Q Consensus 139 ~-~~L~~L~ls~N~l~~--~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~---~~~~L~~L~l~~N~l~~~~p~~~~~~~~ 211 (627)
. .+|+.|+|++|+|++ .++ ..+.++++|+.|++++|+|++.+|.. .+++|+.|+|++|+|+ .+|..+. ++
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~ 275 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AK 275 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SE
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CC
Confidence 2 378999999999883 122 34457788999999999998866432 5788999999999998 7777665 55
Q ss_pred Cccc
Q 006886 212 SSFV 215 (627)
Q Consensus 212 l~~~ 215 (627)
|+.+
T Consensus 276 L~~L 279 (312)
T 1wwl_A 276 LSVL 279 (312)
T ss_dssp EEEE
T ss_pred ceEE
Confidence 5544
No 325
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.58 E-value=1.1e-15 Score=170.42 Aligned_cols=144 Identities=19% Similarity=0.168 Sum_probs=125.0
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchh-hcc-ccccc
Q 006886 68 RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAF-RSL-QLNAL 145 (627)
Q Consensus 68 ~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~-~L~~L 145 (627)
+.+++.|+|++|++++..+. .|.++++|+.|+|++|.+++..|..|.++++|++|+|++|++++..|.. ... +|++|
T Consensus 31 ~~~l~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 109 (606)
T 3vq2_A 31 PSSTKNIDLSFNPLKILKSY-SFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENL 109 (606)
T ss_dssp CTTCCEEECTTSCCCEECTT-TTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEE
T ss_pred CCCcCEEECCCCCcCEeChh-hccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEE
Confidence 36799999999999965554 8999999999999999999888989999999999999999999997764 333 89999
Q ss_pred cccccccccCCccccccccccccccccCCcccc-cCCCC--CCCccceeeccCCCccccCCCCCCCCCCC
Q 006886 146 DLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISG-AIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNS 212 (627)
Q Consensus 146 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l 212 (627)
+|++|.+++..|..|+++++|++|++++|++++ .+|.. ++++|++|++++|++++..|..++.+.++
T Consensus 110 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 179 (606)
T 3vq2_A 110 VAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLREN 179 (606)
T ss_dssp ECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHC
T ss_pred EccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhcc
Confidence 999999997777889999999999999999986 55654 89999999999999998888877766544
No 326
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.58 E-value=2.3e-15 Score=166.61 Aligned_cols=153 Identities=20% Similarity=0.286 Sum_probs=93.4
Q ss_pred cEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCC-CCCCCcccccEEeeecccccccCchhhc--ccccccc
Q 006886 70 RVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLP-SDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNALD 146 (627)
Q Consensus 70 ~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~~~--~~L~~L~ 146 (627)
+++.|+|++|.+++ +++ .+..+++|+.|+|++|.+++..| ..+..+++|++|+|++|++.+.+|..+. .+|+.|+
T Consensus 374 ~L~~L~l~~n~l~~-~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 451 (570)
T 2z63_A 374 SLKYLDLSFNGVIT-MSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 451 (570)
T ss_dssp CCCEEECCSCSEEE-EEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEE
T ss_pred ccCEEECCCCcccc-ccc-cccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEE
Confidence 45555555555542 333 26666666666666666665544 3566666666677766666666554332 2677777
Q ss_pred ccccccc-cCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCCCCCCCCCCCccc---CCCcC
Q 006886 147 LSFNAFT-GNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV---GNSML 220 (627)
Q Consensus 147 ls~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~---~n~~~ 220 (627)
|++|.++ +.+|..|..+++|+.|++++|++++..|.. .+++|+.|++++|++++..|..+..+++|+.+ +|+..
T Consensus 452 l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 531 (570)
T 2z63_A 452 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWD 531 (570)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCccc
Confidence 7777765 456666777777777777777776655543 56677777777777776666666666555543 45555
Q ss_pred CCCC
Q 006886 221 CGLP 224 (627)
Q Consensus 221 ~~~~ 224 (627)
|.++
T Consensus 532 ~~~~ 535 (570)
T 2z63_A 532 CSCP 535 (570)
T ss_dssp CCTT
T ss_pred CCCc
Confidence 5544
No 327
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.58 E-value=1.5e-15 Score=166.13 Aligned_cols=146 Identities=23% Similarity=0.373 Sum_probs=119.7
Q ss_pred CCCCCCCCCC----CCcce-EeeCCCCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccE
Q 006886 48 NWNAAAPVCS----SWIGV-TCNVNRSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQY 122 (627)
Q Consensus 48 ~W~~~~~~c~----~w~gv-~C~~~~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 122 (627)
+|.....+|. .|.|+ .|.. .+++.|+|++|++++ +|. .+ +++|+.|+|++|+|+ .+| ..+++|++
T Consensus 35 ~W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~-~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~ 104 (571)
T 3cvr_A 35 KWEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPD-NL--PPQITVLEITQNALI-SLP---ELPASLEY 104 (571)
T ss_dssp HHHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCS-CC--CTTCSEEECCSSCCS-CCC---CCCTTCCE
T ss_pred HHhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCH-hH--cCCCCEEECcCCCCc-ccc---cccCCCCE
Confidence 4655555663 49999 7875 579999999999996 887 34 488999999999999 788 45799999
Q ss_pred EeeecccccccCchhhccccccccccccccccCCccccccccccccccccCCcccccCCCCCCCccceeeccCCCccccC
Q 006886 123 VYLQNNYFSGVLPAFRSLQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSI 202 (627)
Q Consensus 123 L~l~~N~l~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~ 202 (627)
|+|++|+|+++++ +. .+|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +
T Consensus 105 L~Ls~N~l~~ip~-l~-~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~-~l~~L~~L~Ls~N~L~~-l 175 (571)
T 3cvr_A 105 LDACDNRLSTLPE-LP-ASLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE-LPTSLEVLSVRNNQLTF-L 175 (571)
T ss_dssp EECCSSCCSCCCC-CC-TTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCSC-C
T ss_pred EEccCCCCCCcch-hh-cCCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC-cCCCcCEEECCCCCCCC-c
Confidence 9999999999655 43 389999999999996 776 68899999999999997 555 78899999999999986 7
Q ss_pred CCCCCCCCCCccc
Q 006886 203 PDSLQTFPNSSFV 215 (627)
Q Consensus 203 p~~~~~~~~l~~~ 215 (627)
|. +. ++|..+
T Consensus 176 p~-l~--~~L~~L 185 (571)
T 3cvr_A 176 PE-LP--ESLEAL 185 (571)
T ss_dssp CC-CC--TTCCEE
T ss_pred ch-hh--CCCCEE
Confidence 77 54 555554
No 328
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.58 E-value=1.6e-15 Score=143.55 Aligned_cols=140 Identities=22% Similarity=0.316 Sum_probs=113.3
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCch-hhc-ccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPA-FRS-LQLNALD 146 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~L~ 146 (627)
.+++.|++++|+++ .+| .+..+++|+.|+|++|.++ .+..+..+++|++|+|++|++++..+. +.. .+|+.|+
T Consensus 44 ~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT--GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HTCCEEEEESSCCS-CCT--TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred CCccEEeccCCCcc-ChH--HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 46889999999998 666 4889999999999999776 334788999999999999999985443 433 3799999
Q ss_pred ccccccccCCccccccccccccccccCCc-ccccCCCC-CCCccceeeccCCCccccCCCCCCCCCCCcccC
Q 006886 147 LSFNAFTGNIPPGFQNLTRLHLLNLQNNS-ISGAIPPL-NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~-~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
|++|++++..|..+..+++|++|++++|+ ++ .+|.. .+++|+.|++++|++++ ++ .+..+++|+.++
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~ 187 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIMPLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLY 187 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCGGGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEE
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccHhhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEE
Confidence 99999998788889999999999999998 55 44544 88999999999999985 44 666777766553
No 329
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.58 E-value=3.3e-15 Score=153.60 Aligned_cols=125 Identities=22% Similarity=0.317 Sum_probs=75.8
Q ss_pred ccCCCCcccEEEccCcccC--ccCCCCCCCcccccEEeeecccccccCchhhccccccccccccccccCCcccccccccc
Q 006886 89 SIGKLDALKILSLRSNYLN--GTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQLNALDLSFNAFTGNIPPGFQNLTRL 166 (627)
Q Consensus 89 ~l~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L 166 (627)
.|.++++|+.|+|++|.++ +..|..+..+ +|++|++++|++++++.... .+|+.|+|++|.+++..|..|.++++|
T Consensus 142 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~~~-~~L~~L~l~~n~i~~~~~~~l~~l~~L 219 (332)
T 2ft3_A 142 VFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLP-ETLNELHLDHNKIQAIELEDLLRYSKL 219 (332)
T ss_dssp GGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSSSC-SSCSCCBCCSSCCCCCCTTSSTTCTTC
T ss_pred HhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCcccc-CCCCEEECCCCcCCccCHHHhcCCCCC
Confidence 3444444444444444443 2334444444 44444444444444332222 367777777777776666677777778
Q ss_pred ccccccCCcccccCCCC--CCCccceeeccCCCccccCCCCCCCCCCCcccC
Q 006886 167 HLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 167 ~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
+.|++++|++++..+.. .+++|+.|++++|+++ .+|..+..+++|+.++
T Consensus 220 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~ 270 (332)
T 2ft3_A 220 YRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVY 270 (332)
T ss_dssp SCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEE
T ss_pred CEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEE
Confidence 88888888777655533 6777888888888877 6777777777776654
No 330
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.58 E-value=2.7e-15 Score=154.06 Aligned_cols=144 Identities=21% Similarity=0.271 Sum_probs=113.8
Q ss_pred cEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCc--cCCCCCCCcccccEEeeecccccccCchhhccccccccc
Q 006886 70 RVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNG--TLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQLNALDL 147 (627)
Q Consensus 70 ~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l 147 (627)
.++.|++++|.+++ +++..|.++++|+.|+|++|.++. ..|..|..+++|++|++++|+++.++.... .+|+.|+|
T Consensus 122 ~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~-~~L~~L~l 199 (330)
T 1xku_A 122 TLQELRVHENEITK-VRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLP-PSLTELHL 199 (330)
T ss_dssp TCCEEECCSSCCCB-BCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCC-TTCSEEEC
T ss_pred cccEEECCCCcccc-cCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCcccc-ccCCEEEC
Confidence 45555555555553 333357788888888888888853 667778888888888888888887655433 67999999
Q ss_pred cccccccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCCCCCCCCCCCcccC
Q 006886 148 SFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
++|++++..|..|.++++|+.|++++|++++..+.. .+++|+.|++++|+++ .+|..+..+++|+.++
T Consensus 200 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~ 269 (330)
T 1xku_A 200 DGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVY 269 (330)
T ss_dssp TTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEE
T ss_pred CCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEE
Confidence 999999877888999999999999999999876643 7889999999999998 8888888888887764
No 331
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.58 E-value=2.2e-15 Score=167.58 Aligned_cols=110 Identities=18% Similarity=0.171 Sum_probs=98.0
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhh-c-ccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFR-S-LQLNALD 146 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~-~-~~L~~L~ 146 (627)
.+++.|+|++|++++..|. .|+.+++|+.|+|++|.|++..|..|+.+++|++|+|++|.|+++++..+ . .+|+.|+
T Consensus 75 ~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTY-AFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 153 (597)
T ss_dssp CCCSEEECTTSCCCEECTT-TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCCCChH-HhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEE
Confidence 4689999999999965555 89999999999999999998888889999999999999999999888753 3 4899999
Q ss_pred ccccccccCCccccccccccccccccCCccccc
Q 006886 147 LSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGA 179 (627)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 179 (627)
|++|.|++..|..|.++++|+.|+|++|+|++.
T Consensus 154 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 186 (597)
T 3oja_B 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 186 (597)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC
T ss_pred eeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc
Confidence 999999988888899999999999999998863
No 332
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.58 E-value=1.1e-15 Score=175.10 Aligned_cols=145 Identities=20% Similarity=0.312 Sum_probs=130.0
Q ss_pred CCcEEEEEcCCCCccc-----------------ccCccccC--CCCcccEEEccCcccCccCCCCCCCcccccEEeeecc
Q 006886 68 RSRVIGIHLPGIGFTG-----------------PIPANSIG--KLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNN 128 (627)
Q Consensus 68 ~~~v~~l~l~~~~l~~-----------------~~~~~~l~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 128 (627)
-.+++.|+|++|+++| .+|. .++ ++++|+.|+|++|.+.+.+|..|+++++|++|+|++|
T Consensus 447 L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~-~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N 525 (876)
T 4ecn_A 447 LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENE-ELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACN 525 (876)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTS-CCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTC
T ss_pred CCCCCEEECcCCcCCCCcccccccccccccccccCCh-hhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCC
Confidence 3679999999999998 4888 677 9999999999999999999999999999999999999
Q ss_pred c-ccc-cCch-hhcc--------ccccccccccccccCCcc--ccccccccccccccCCcccccCCCC-CCCccceeecc
Q 006886 129 Y-FSG-VLPA-FRSL--------QLNALDLSFNAFTGNIPP--GFQNLTRLHLLNLQNNSISGAIPPL-NLPRLKILNFS 194 (627)
Q Consensus 129 ~-l~~-~~~~-~~~~--------~L~~L~ls~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~L~~L~l~ 194 (627)
+ ++| .+|. +... +|+.|+|++|+|+ .+|. .|+++++|+.|+|++|+|+ .+|.. .+++|+.|+|+
T Consensus 526 ~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~~L~~L~Ls 603 (876)
T 4ecn_A 526 RGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNVKLTDLKLD 603 (876)
T ss_dssp TTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCCTTSEESEEECC
T ss_pred CCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhhcCCCcceEEECc
Confidence 8 998 6664 3322 7999999999999 8998 9999999999999999999 67754 89999999999
Q ss_pred CCCccccCCCCCCCCCC-CcccC
Q 006886 195 NNNLNGSIPDSLQTFPN-SSFVG 216 (627)
Q Consensus 195 ~N~l~~~~p~~~~~~~~-l~~~~ 216 (627)
+|+++ .+|..+..+++ |+.++
T Consensus 604 ~N~l~-~lp~~l~~l~~~L~~L~ 625 (876)
T 4ecn_A 604 YNQIE-EIPEDFCAFTDQVEGLG 625 (876)
T ss_dssp SSCCS-CCCTTSCEECTTCCEEE
T ss_pred CCccc-cchHHHhhccccCCEEE
Confidence 99999 89999988888 87764
No 333
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.57 E-value=6.2e-15 Score=138.92 Aligned_cols=126 Identities=23% Similarity=0.366 Sum_probs=107.6
Q ss_pred cEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhcc-ccccccccccccccCCccccccccccccccccCCc
Q 006886 97 KILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSL-QLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNS 175 (627)
Q Consensus 97 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 175 (627)
+.+++++|.|+ .+|..+. ++|++|+|++|+|+.++..+... +|+.|+|++|+|++..|..|.++++|+.|+|++|+
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 57999999998 7887764 79999999999999777555554 89999999999998777889999999999999999
Q ss_pred ccccCCCC--CCCccceeeccCCCccccCCCCCCCCCCCccc---CCCcCCCCCC
Q 006886 176 ISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV---GNSMLCGLPL 225 (627)
Q Consensus 176 l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~---~n~~~~~~~~ 225 (627)
|++..|.. .+++|+.|+|++|+|++..+..|..+++|+.+ +|++.|++.+
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l 144 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNM 144 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGG
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcC
Confidence 99877753 89999999999999996666678777777654 7888887654
No 334
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.57 E-value=1.4e-15 Score=164.73 Aligned_cols=31 Identities=6% Similarity=0.048 Sum_probs=25.8
Q ss_pred CHHHHHHHHHHHHHhccCCCeeeeeeEEeeCC
Q 006886 372 TKREFEQQMEVVGTIGKHSNVVPVRAYYYSKD 403 (627)
Q Consensus 372 ~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~ 403 (627)
..++|..|++.+.++ +|+|+|+++|||....
T Consensus 322 g~~eF~~Eve~L~~i-~HrNLV~L~gyC~s~~ 352 (487)
T 3oja_A 322 GSETERLECERENQA-RQREIDALKEQYRTVI 352 (487)
T ss_dssp ---CHHHHHHHHHHH-HHHHHHHHHHHTCCCC
T ss_pred cHHHHHHHHHHHhcc-cccchhhHHHHhcChH
Confidence 367899999999999 9999999999997654
No 335
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.57 E-value=2.2e-15 Score=147.18 Aligned_cols=146 Identities=16% Similarity=0.197 Sum_probs=123.8
Q ss_pred CCcEEEEEcCCCC-cccccCccccCCCCcccEEEccC-cccCccCCCCCCCcccccEEeeecccccccCchhhcc-ccc-
Q 006886 68 RSRVIGIHLPGIG-FTGPIPANSIGKLDALKILSLRS-NYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSL-QLN- 143 (627)
Q Consensus 68 ~~~v~~l~l~~~~-l~~~~~~~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-~L~- 143 (627)
-.+++.|+|++|+ ++ .+++..|.++++|+.|+|++ |.|++..+..|..+++|++|+|++|+++++++ +... +|+
T Consensus 54 l~~L~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 54 LPNISRIYVSIDVTLQ-QLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKMFPD-LTKVYSTDI 131 (239)
T ss_dssp CTTCCEEEEECCSSCC-EECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCSCCC-CTTCCBCCS
T ss_pred CCCCcEEeCCCCCCcc-eeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCccccc-ccccccccc
Confidence 3679999999998 66 66666899999999999999 99997777889999999999999999999654 4443 676
Q ss_pred --ccccccc-ccccCCccccccccccc-cccccCCcccccCCCC--CCCccceeeccCCC-ccccCCCCCCCC-CCCccc
Q 006886 144 --ALDLSFN-AFTGNIPPGFQNLTRLH-LLNLQNNSISGAIPPL--NLPRLKILNFSNNN-LNGSIPDSLQTF-PNSSFV 215 (627)
Q Consensus 144 --~L~ls~N-~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~-l~~~~p~~~~~~-~~l~~~ 215 (627)
.|++++| .+++..+..|.++++|+ .|++++|+++ .+|.. ..++|+.|++++|+ +++..+..|..+ ++|+.+
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L 210 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLL 210 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEE
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEE
Confidence 9999999 99976666799999999 9999999999 45543 44899999999995 996667788888 888876
Q ss_pred C
Q 006886 216 G 216 (627)
Q Consensus 216 ~ 216 (627)
+
T Consensus 211 ~ 211 (239)
T 2xwt_C 211 D 211 (239)
T ss_dssp E
T ss_pred E
Confidence 5
No 336
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.57 E-value=2.1e-15 Score=163.18 Aligned_cols=148 Identities=20% Similarity=0.185 Sum_probs=130.1
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhc--cccccc
Q 006886 68 RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNAL 145 (627)
Q Consensus 68 ~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~--~~L~~L 145 (627)
-.+++.|+|++|.+++..|. .|.++++|+.|+|++|.|++..+..|.++++|++|+|++|++.+.++..+. .+|+.|
T Consensus 55 l~~L~~L~L~~n~i~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 133 (477)
T 2id5_A 55 FPHLEELELNENIVSAVEPG-AFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSL 133 (477)
T ss_dssp CTTCCEEECTTSCCCEECTT-TTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCccCEeChh-hhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEE
Confidence 36799999999999976666 899999999999999999966666789999999999999999999886443 389999
Q ss_pred cccccccccCCccccccccccccccccCCcccccCCC--CCCCccceeeccCCCccccCCCCCCCCCCCcccC
Q 006886 146 DLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPP--LNLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 146 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~--~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
+|++|.+++..|..|.++++|+.|++++|++++..+. ..+++|+.|++++|.+++..+..+..+++|+.++
T Consensus 134 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~ 206 (477)
T 2id5_A 134 EVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLE 206 (477)
T ss_dssp EECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEE
T ss_pred ECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceee
Confidence 9999999988888999999999999999999975543 2899999999999999988888888888887764
No 337
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.57 E-value=9.9e-16 Score=137.97 Aligned_cols=125 Identities=22% Similarity=0.302 Sum_probs=108.1
Q ss_pred CCCCcccEEEccCcccC-ccCCCCCCCcccccEEeeecccccccCchhhc-cccccccccccccccCCcccccccccccc
Q 006886 91 GKLDALKILSLRSNYLN-GTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALDLSFNAFTGNIPPGFQNLTRLHL 168 (627)
Q Consensus 91 ~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~ 168 (627)
...++|+.|+|++|.++ +.+|..+..+++|++|+|++|.+++. +.+.. .+|+.|+|++|.+++.+|..+..+++|++
T Consensus 14 ~~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 14 RTPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CCGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 34578999999999998 88999999999999999999999998 54444 38999999999999879998989999999
Q ss_pred ccccCCcccccC--CCC-CCCccceeeccCCCccccCC---CCCCCCCCCcccC
Q 006886 169 LNLQNNSISGAI--PPL-NLPRLKILNFSNNNLNGSIP---DSLQTFPNSSFVG 216 (627)
Q Consensus 169 L~l~~N~l~~~~--p~~-~~~~L~~L~l~~N~l~~~~p---~~~~~~~~l~~~~ 216 (627)
|++++|++++.. ... .+++|+.|++++|++++..+ ..+..+++|+.++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~ 146 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLD 146 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEET
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCccccc
Confidence 999999999743 222 89999999999999996655 4688888888775
No 338
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.57 E-value=1.7e-15 Score=171.45 Aligned_cols=137 Identities=22% Similarity=0.252 Sum_probs=113.3
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCch-hhc-ccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPA-FRS-LQLNALD 146 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~L~ 146 (627)
.+++.|+|++|++++ +++..|.++++|+.|+|++|.+++..|..|.++++|++|+|++|+++++++. +.. .+|++|+
T Consensus 25 ~~l~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 25 TNITVLNLTHNQLRR-LPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp TTCSEEECCSSCCCC-CCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCcEEECCCCCCCC-cCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 578999999999885 4444789999999999999999988888888999999999999999988775 444 3799999
Q ss_pred ccccccccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCCCCC
Q 006886 147 LSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSL 206 (627)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~~~ 206 (627)
|++|++++..|..|+++++|++|++++|++++..|.. .+++|++|++++|.+++..+..+
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 165 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEEL 165 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHH
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHh
Confidence 9999998766678889999999999999998876654 78888888888888887666543
No 339
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.56 E-value=2.8e-15 Score=137.89 Aligned_cols=126 Identities=23% Similarity=0.295 Sum_probs=108.6
Q ss_pred CCCCcccEEEccCcccC-ccCCCCCCCcccccEEeeecccccccCchhhc-cccccccccccccccCCcccccccccccc
Q 006886 91 GKLDALKILSLRSNYLN-GTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALDLSFNAFTGNIPPGFQNLTRLHL 168 (627)
Q Consensus 91 ~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~ 168 (627)
...++|+.|+|++|.++ +.+|..+..+++|++|+|++|.+++. +.+.. .+|+.|+|++|++++.+|..+.++++|+.
T Consensus 21 ~~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 21 RTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp SCTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CCcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 34578999999999998 78999999999999999999999988 54444 38999999999999878888888999999
Q ss_pred ccccCCcccccC--CCC-CCCccceeeccCCCccccCC---CCCCCCCCCcccCC
Q 006886 169 LNLQNNSISGAI--PPL-NLPRLKILNFSNNNLNGSIP---DSLQTFPNSSFVGN 217 (627)
Q Consensus 169 L~l~~N~l~~~~--p~~-~~~~L~~L~l~~N~l~~~~p---~~~~~~~~l~~~~n 217 (627)
|++++|+|++.. +.. .+++|+.|++++|++++..+ ..+..+++|+.++-
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l 154 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDG 154 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETT
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecC
Confidence 999999999743 222 89999999999999995544 47888898888764
No 340
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.56 E-value=2.7e-15 Score=165.23 Aligned_cols=149 Identities=18% Similarity=0.242 Sum_probs=99.6
Q ss_pred CcEEEEEcCCCCcccccC-ccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhccccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIP-ANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQLNALDL 147 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~-~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l 147 (627)
.+++.|+|++|++++..+ ...+..+++|+.|+|++|+|+ .+|..+..+++|++|+|++|++++++... ..+|+.|+|
T Consensus 361 ~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l~~~~-~~~L~~L~L 438 (549)
T 2z81_A 361 PSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVVKTCI-PQTLEVLDV 438 (549)
T ss_dssp TTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCCCTTS-CTTCSEEEC
T ss_pred ccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcccccchh-cCCceEEEC
Confidence 345555555555542211 023556666666666666666 56666666666666666666666543322 236777777
Q ss_pred cccccccCCccccccccccccccccCCcccccCCCC-CCCccceeeccCCCccccCCCCCCCCCCCcc---cCCCcCCCC
Q 006886 148 SFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL-NLPRLKILNFSNNNLNGSIPDSLQTFPNSSF---VGNSMLCGL 223 (627)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~---~~n~~~~~~ 223 (627)
++|+|++.+ ..+++|++|+|++|+|+ .+|.. .+++|+.|+|++|++++.+|..+..+++|+. .+|++.|++
T Consensus 439 s~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 513 (549)
T 2z81_A 439 SNNNLDSFS----LFLPRLQELYISRNKLK-TLPDASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 513 (549)
T ss_dssp CSSCCSCCC----CCCTTCCEEECCSSCCS-SCCCGGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCH
T ss_pred CCCChhhhc----ccCChhcEEECCCCccC-cCCCcccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCC
Confidence 777777532 46888999999999998 45544 7889999999999999888877777776664 467777765
Q ss_pred C
Q 006886 224 P 224 (627)
Q Consensus 224 ~ 224 (627)
+
T Consensus 514 ~ 514 (549)
T 2z81_A 514 P 514 (549)
T ss_dssp H
T ss_pred c
Confidence 4
No 341
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.55 E-value=1.6e-14 Score=150.35 Aligned_cols=148 Identities=20% Similarity=0.219 Sum_probs=121.7
Q ss_pred cceEeeCCCCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCC-CcccccEEeeecccccccCch-h
Q 006886 60 IGVTCNVNRSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDIT-SISSLQYVYLQNNYFSGVLPA-F 137 (627)
Q Consensus 60 ~gv~C~~~~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~~~-~ 137 (627)
.+..|.. ..+++++++|+ .+|. .+. +.|+.|+|++|+|++..+..|. .+++|++|+|++|+|+++++. +
T Consensus 14 ~~C~C~~-----~~l~c~~~~l~-~iP~-~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~ 84 (361)
T 2xot_A 14 ANCLCAS-----NILSCSKQQLP-NVPQ-SLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAF 84 (361)
T ss_dssp TTCEEET-----TEEECCSSCCS-SCCS-SCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTT
T ss_pred CCCEECC-----CEEEeCCCCcC-ccCc-cCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhc
Confidence 5677763 36899999998 5787 343 4689999999999987777787 999999999999999999886 4
Q ss_pred hc-cccccccccccccccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCCCCC---CCCCC
Q 006886 138 RS-LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSL---QTFPN 211 (627)
Q Consensus 138 ~~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~~~---~~~~~ 211 (627)
.. .+|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..|.. .+++|+.|+|++|+|++..+..+ ..+++
T Consensus 85 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~ 164 (361)
T 2xot_A 85 VPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPK 164 (361)
T ss_dssp TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTT
T ss_pred cCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCc
Confidence 44 38999999999999777778999999999999999999876654 89999999999999995444444 55777
Q ss_pred CcccC
Q 006886 212 SSFVG 216 (627)
Q Consensus 212 l~~~~ 216 (627)
|+.++
T Consensus 165 L~~L~ 169 (361)
T 2xot_A 165 LMLLD 169 (361)
T ss_dssp CCEEE
T ss_pred CCEEE
Confidence 77664
No 342
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.55 E-value=7.8e-15 Score=154.34 Aligned_cols=109 Identities=18% Similarity=0.175 Sum_probs=80.9
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhh-c-ccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFR-S-LQLNALD 146 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~-~-~~L~~L~ 146 (627)
.+++.|+|++|++++..+ ..|..+++|+.|+|++|.+++..|..|..+++|++|+|++|+++.+++..+ . .+|++|+
T Consensus 69 ~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDT-YAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCSEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccCcEEECCCCcccccCh-hhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEE
Confidence 467778888888774333 367888888888888888877667777788888888888888887666543 2 3688888
Q ss_pred ccccccccCCccccccccccccccccCCcccc
Q 006886 147 LSFNAFTGNIPPGFQNLTRLHLLNLQNNSISG 178 (627)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 178 (627)
|++|.+++..|..|.++++|+.|++++|++++
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 179 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 179 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSB
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCc
Confidence 88888876666677777788888888777764
No 343
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.55 E-value=6.4e-16 Score=157.88 Aligned_cols=147 Identities=21% Similarity=0.221 Sum_probs=107.8
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhc---cccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS---LQLNAL 145 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~---~~L~~L 145 (627)
..++.|++++|++++.. ...+++|+.|+|++|.+++..|..+..+++|++|+|++|++++..+.... .+|+.|
T Consensus 99 ~~L~~L~l~~n~l~~~~----~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L 174 (317)
T 3o53_A 99 PSIETLHAANNNISRVS----CSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHL 174 (317)
T ss_dssp TTCCEEECCSSCCSEEE----ECCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEE
T ss_pred CCcCEEECCCCccCCcC----ccccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEE
Confidence 44556666666666432 23467888999999998877777888888999999999988887665332 478888
Q ss_pred cccccccccCCccccccccccccccccCCcccccCCCC-CCCccceeeccCCCccccCCCCCCCCCCCccc---CCCcCC
Q 006886 146 DLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL-NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV---GNSMLC 221 (627)
Q Consensus 146 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~---~n~~~~ 221 (627)
+|++|.|++ +|. ...+++|+.|++++|+|++.++.. .+++|+.|++++|+++ .+|..+..+++|+.+ +|+..|
T Consensus 175 ~L~~N~l~~-~~~-~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~ 251 (317)
T 3o53_A 175 NLQYNFIYD-VKG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHC 251 (317)
T ss_dssp ECTTSCCCE-EEC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBH
T ss_pred ECCCCcCcc-ccc-ccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccC
Confidence 888888885 343 334788888888888888755544 7788888888888888 567777777776654 455554
Q ss_pred C
Q 006886 222 G 222 (627)
Q Consensus 222 ~ 222 (627)
+
T Consensus 252 ~ 252 (317)
T 3o53_A 252 G 252 (317)
T ss_dssp H
T ss_pred c
Confidence 3
No 344
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.55 E-value=1.1e-14 Score=150.93 Aligned_cols=96 Identities=13% Similarity=0.103 Sum_probs=61.5
Q ss_pred CCCcceEeeCC---------CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCC-CCCCcccccE-Eee
Q 006886 57 SSWIGVTCNVN---------RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPS-DITSISSLQY-VYL 125 (627)
Q Consensus 57 ~~w~gv~C~~~---------~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~-L~l 125 (627)
|+|..|.|+.. +..++.|+|++|+|+ .+|++.|.+|++|+.|+|++|.+.+.+|. .|.++++|++ +++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 47899999752 246899999999998 68877899999999999999998655543 3444544432 333
Q ss_pred ecccccccCchhhc--cccccccccccccc
Q 006886 126 QNNYFSGVLPAFRS--LQLNALDLSFNAFT 153 (627)
Q Consensus 126 ~~N~l~~~~~~~~~--~~L~~L~ls~N~l~ 153 (627)
++|++.+++|..+. .+|+.|++++|+|+
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~ 117 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIK 117 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCS
T ss_pred cCCcccccCchhhhhccccccccccccccc
Confidence 44444444443221 13444444444443
No 345
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.54 E-value=9.7e-15 Score=147.08 Aligned_cols=138 Identities=27% Similarity=0.379 Sum_probs=104.0
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhc-cccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALDL 147 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~L~l 147 (627)
.+++.|+|++|++++ +++ +..+++|+.|+|++|.+++ +| .+..+++|++|+|++|++++. +.+.. .+|+.|+|
T Consensus 68 ~~L~~L~L~~n~l~~-~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~-~~l~~l~~L~~L~l 141 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTD-IKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI-NGLVHLPQLESLYL 141 (291)
T ss_dssp TTCCEEECCSSCCCC-CGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC-GGGGGCTTCCEEEC
T ss_pred CCCCEEEccCCccCC-Ccc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC-hhhcCCCCCCEEEc
Confidence 568888888888875 333 7888888888888888874 34 488888888888888888875 44433 37888888
Q ss_pred cccccccCCccccccccccccccccCCcccccCCCCCCCccceeeccCCCccccCCCCCCCCCCCcccC
Q 006886 148 SFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
++|++++. ..+..+++|+.|++++|++++..+-..+++|+.|++++|.+++ +| .+..+++|..++
T Consensus 142 ~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~ 206 (291)
T 1h6t_A 142 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLE 206 (291)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEE
T ss_pred cCCcCCcc--hhhccCCCCCEEEccCCccccchhhcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEE
Confidence 88888853 5688888888888888888876664478888888888888874 44 366677766653
No 346
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.53 E-value=2.7e-15 Score=152.73 Aligned_cols=146 Identities=18% Similarity=0.120 Sum_probs=117.5
Q ss_pred cEEEEEcCCCCcccccCcccc--CCCCcccEEEccCcccCccCC----CCCCCcccccEEeeecccccccCchhhc--cc
Q 006886 70 RVIGIHLPGIGFTGPIPANSI--GKLDALKILSLRSNYLNGTLP----SDITSISSLQYVYLQNNYFSGVLPAFRS--LQ 141 (627)
Q Consensus 70 ~v~~l~l~~~~l~~~~~~~~l--~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~l~~N~l~~~~~~~~~--~~ 141 (627)
+++.|+|++|++++..|. .+ ..+++|+.|+|++|.+++..| ..+..+++|++|+|++|++.+.++..+. .+
T Consensus 92 ~L~~L~l~~n~l~~~~~~-~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPP-LPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp CCCEEEEESCCCBSCCCC-CSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred ceeEEEeeCCEeccchhh-hhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 489999999999988888 55 899999999999999997665 3456789999999999999998876433 38
Q ss_pred cccccccccccccC--Cc--cccccccccccccccCCcccccCCC-----CCCCccceeeccCCCccccCCCCCCCC---
Q 006886 142 LNALDLSFNAFTGN--IP--PGFQNLTRLHLLNLQNNSISGAIPP-----LNLPRLKILNFSNNNLNGSIPDSLQTF--- 209 (627)
Q Consensus 142 L~~L~ls~N~l~~~--~p--~~~~~l~~L~~L~l~~N~l~~~~p~-----~~~~~L~~L~l~~N~l~~~~p~~~~~~--- 209 (627)
|++|+|++|++.+. ++ ..+..+++|++|+|++|+++...+. ..+++|++|+|++|++++..|..+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 99999999998753 32 2347889999999999999743221 167899999999999998888877766
Q ss_pred CCCcccC
Q 006886 210 PNSSFVG 216 (627)
Q Consensus 210 ~~l~~~~ 216 (627)
++|+.++
T Consensus 251 ~~L~~L~ 257 (310)
T 4glp_A 251 SALNSLN 257 (310)
T ss_dssp TTCCCEE
T ss_pred CcCCEEE
Confidence 4666554
No 347
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.53 E-value=1e-14 Score=137.90 Aligned_cols=127 Identities=19% Similarity=0.302 Sum_probs=107.3
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCch-hhc-ccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPA-FRS-LQLNALD 146 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~L~ 146 (627)
.+++.|++++|.++ .++ .+..+++|+.|+|++|.+++..|..|..+++|++|+|++|++++..+. +.. .+|+.|+
T Consensus 66 ~~L~~L~l~~n~~~--~~~-~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~ 142 (197)
T 4ezg_A 66 HNIKDLTINNIHAT--NYN-PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSID 142 (197)
T ss_dssp TTCSEEEEESCCCS--CCG-GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEE
T ss_pred CCCCEEEccCCCCC--cch-hhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEE
Confidence 57999999999765 333 699999999999999999988899999999999999999999986665 333 3899999
Q ss_pred ccccc-cccCCccccccccccccccccCCcccccCCCCCCCccceeeccCCCccc
Q 006886 147 LSFNA-FTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNG 200 (627)
Q Consensus 147 ls~N~-l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~l~~N~l~~ 200 (627)
|++|. ++ .+| .+..+++|+.|++++|++++..+-..+++|+.|++++|++.+
T Consensus 143 L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 143 LSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCTTGGGCSSCCEEEECBC----
T ss_pred ccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcChHHhccCCCCCEEEeeCcccCC
Confidence 99998 66 576 699999999999999999975433489999999999999864
No 348
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.52 E-value=6.4e-15 Score=162.96 Aligned_cols=144 Identities=18% Similarity=0.136 Sum_probs=121.2
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhh-c-cccccc
Q 006886 68 RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFR-S-LQLNAL 145 (627)
Q Consensus 68 ~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~-~-~~L~~L 145 (627)
+.+++.|+|++|++++..+. .|.++++|+.|+|++|++++..|..|.++++|++|+|++|++++.+|..+ . .+|++|
T Consensus 27 ~~~l~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (570)
T 2z63_A 27 PFSTKNLDLSFNPLRHLGSY-SFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKL 105 (570)
T ss_dssp CSSCCEEECCSCCCCEECTT-TTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEE
T ss_pred cccccEEEccCCccCccChh-HhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccc
Confidence 35789999999999865444 89999999999999999998778889999999999999999999887543 3 389999
Q ss_pred cccccccccCCccccccccccccccccCCcccc-cCCCC--CCCccceeeccCCCccccCCCCCCCCCCC
Q 006886 146 DLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISG-AIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNS 212 (627)
Q Consensus 146 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l 212 (627)
++++|++++..+..|+++++|++|++++|++++ .+|.. ++++|+.|++++|++++..|..++.+++|
T Consensus 106 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 175 (570)
T 2z63_A 106 VAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175 (570)
T ss_dssp ECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTC
T ss_pred cccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhcc
Confidence 999999996555579999999999999999987 35653 78999999999999998777777766665
No 349
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.52 E-value=5e-15 Score=162.03 Aligned_cols=139 Identities=23% Similarity=0.291 Sum_probs=121.5
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhcccccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQLNALDLS 148 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~ls 148 (627)
.+++.|+|++|++++..|. .|.++++|+.|+|++|+|++..|..|.++++|++|+|++|+++++++. ...+|++|+|+
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~-~l~~L~~L~L~ 98 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTS-DILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCH-PTVNLKHLDLS 98 (520)
T ss_dssp TTCSEEECCSSCCCCCCHH-HHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEEECC-CCCCCSEEECC
T ss_pred ccccEEECCCCcccccChh-hccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceeecCcc-ccCCccEEecc
Confidence 6799999999999965544 899999999999999999988899999999999999999999976655 44589999999
Q ss_pred cccccc-CCccccccccccccccccCCcccccCCCCCCCcc--ceeeccCCCc--cccCCCCCCCCC
Q 006886 149 FNAFTG-NIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRL--KILNFSNNNL--NGSIPDSLQTFP 210 (627)
Q Consensus 149 ~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L--~~L~l~~N~l--~~~~p~~~~~~~ 210 (627)
+|.+++ .+|..|+++++|++|++++|+|++. ....+++| +.|++++|.+ ++..|..+..+.
T Consensus 99 ~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~-~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~ 164 (520)
T 2z7x_B 99 FNAFDALPICKEFGNMSQLKFLGLSTTHLEKS-SVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFN 164 (520)
T ss_dssp SSCCSSCCCCGGGGGCTTCCEEEEEESSCCGG-GGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCC
T ss_pred CCccccccchhhhccCCcceEEEecCcccchh-hccccccceeeEEEeecccccccccccccccccc
Confidence 999997 4789999999999999999999862 22367777 9999999999 888888887766
No 350
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.52 E-value=1.6e-14 Score=146.72 Aligned_cols=137 Identities=27% Similarity=0.434 Sum_probs=95.0
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhc-cccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALDL 147 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~L~l 147 (627)
.+++.|+|++|++++ +++ +..+++|+.|+|++|.+++ +| .+..+++|++|+|++|++++..+ +.. .+|+.|+|
T Consensus 63 ~~L~~L~L~~n~i~~-~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l 136 (308)
T 1h6u_A 63 NNLIGLELKDNQITD-LAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITDVTP-LAGLSNLQVLYL 136 (308)
T ss_dssp TTCCEEECCSSCCCC-CGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCCCGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCC-Chh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCCchh-hcCCCCCCEEEC
Confidence 567888888888774 433 7778888888888888774 33 57777888888888888777544 333 36777888
Q ss_pred cccccccCCccccccccccccccccCCcccccCCCCCCCccceeeccCCCccccCCCCCCCCCCCccc
Q 006886 148 SFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV 215 (627)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~ 215 (627)
++|.+++. |. +..+++|+.|++++|++++..+-..+++|+.|++++|++++..+ +..+++|+.+
T Consensus 137 ~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L 200 (308)
T 1h6u_A 137 DLNQITNI-SP-LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP--LASLPNLIEV 200 (308)
T ss_dssp CSSCCCCC-GG-GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEE
T ss_pred CCCccCcC-cc-ccCCCCccEEEccCCcCCCChhhcCCCCCCEEECCCCccCcChh--hcCCCCCCEE
Confidence 88877753 33 77777777777777777765443467777777777777774433 5555665554
No 351
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.52 E-value=1e-16 Score=151.97 Aligned_cols=145 Identities=21% Similarity=0.342 Sum_probs=119.6
Q ss_pred CcEEEEEcCCCCcccccCc-----cccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhc-ccc
Q 006886 69 SRVIGIHLPGIGFTGPIPA-----NSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQL 142 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~-----~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L 142 (627)
..|+.++++.++++|.+|. ..+..+++|+.|+|++|.|++ +| .+..+++|++|+|++|+++.++..+.. .+|
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l~~~~~~~~~L 95 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKIENLDAVADTL 95 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSCSSHHHHHHHC
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcccccchhhcCCcC
Confidence 3455666666666666553 268899999999999999996 77 899999999999999999976654444 489
Q ss_pred ccccccccccccCCccccccccccccccccCCcccccCC--C-CCCCccceeeccCCCccccCCCC----------CCCC
Q 006886 143 NALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIP--P-LNLPRLKILNFSNNNLNGSIPDS----------LQTF 209 (627)
Q Consensus 143 ~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p--~-~~~~~L~~L~l~~N~l~~~~p~~----------~~~~ 209 (627)
+.|+|++|+|++ +| .+..+++|+.|++++|++++..+ . ..+++|++|++++|++++.+|.. +..+
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l 173 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRL 173 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHC
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhC
Confidence 999999999996 66 69999999999999999986433 2 38999999999999999887764 7788
Q ss_pred CCCcccCC
Q 006886 210 PNSSFVGN 217 (627)
Q Consensus 210 ~~l~~~~n 217 (627)
++|+.++.
T Consensus 174 ~~L~~Ld~ 181 (198)
T 1ds9_A 174 PNLKKLDG 181 (198)
T ss_dssp SSCSEECC
T ss_pred CCcEEECC
Confidence 88888864
No 352
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.52 E-value=1.7e-14 Score=145.27 Aligned_cols=137 Identities=23% Similarity=0.377 Sum_probs=117.4
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhc-cccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALDL 147 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~L~l 147 (627)
.+++.|++++|++. .++ .+..+++|+.|+|++|.+++..| +..+++|++|+|++|+++++.. +.. .+|+.|+|
T Consensus 46 ~~L~~L~l~~~~i~-~~~--~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L 119 (291)
T 1h6t_A 46 NSIDQIIANNSDIK-SVQ--GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDLSS-LKDLKKLKSLSL 119 (291)
T ss_dssp HTCCEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCGGG-GTTCTTCCEEEC
T ss_pred CcccEEEccCCCcc-cCh--hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCChh-hccCCCCCEEEC
Confidence 56899999999998 454 48999999999999999996554 9999999999999999998544 444 48999999
Q ss_pred cccccccCCccccccccccccccccCCcccccCCCC-CCCccceeeccCCCccccCCCCCCCCCCCcccC
Q 006886 148 SFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL-NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
++|++++ + +.+..+++|+.|++++|++++. +.. .+++|+.|++++|++++..| +..+++|+.++
T Consensus 120 ~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~ 184 (291)
T 1h6t_A 120 EHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLY 184 (291)
T ss_dssp TTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred CCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh--hcCCCccCEEE
Confidence 9999996 4 4689999999999999999976 433 89999999999999996655 88888887764
No 353
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.52 E-value=7.2e-15 Score=150.01 Aligned_cols=142 Identities=19% Similarity=0.156 Sum_probs=116.3
Q ss_pred eCCCCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhh-c-ccc
Q 006886 65 NVNRSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFR-S-LQL 142 (627)
Q Consensus 65 ~~~~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~-~-~~L 142 (627)
.....+++.|+|++|++++ ++ ..++|+.|+|++|.+++..+.. +++|++|+|++|++++..+..+ . .+|
T Consensus 76 ~~~l~~L~~L~Ls~n~l~~-l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L 146 (317)
T 3o53_A 76 LESLSTLRTLDLNNNYVQE-LL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRV 146 (317)
T ss_dssp ETTCTTCCEEECCSSEEEE-EE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSE
T ss_pred hhhcCCCCEEECcCCcccc-cc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCC
Confidence 3445789999999999983 33 3489999999999999766544 6789999999999999887533 3 489
Q ss_pred ccccccccccccCCccccc-cccccccccccCCcccccCCCCCCCccceeeccCCCccccCCCCCCCCCCCcccC
Q 006886 143 NALDLSFNAFTGNIPPGFQ-NLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 143 ~~L~ls~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
+.|+|++|.+++..|..+. .+++|++|++++|+|++..+...+++|+.|++++|++++ +|..+..+++|+.++
T Consensus 147 ~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~ 220 (317)
T 3o53_A 147 QYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWIS 220 (317)
T ss_dssp EEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEE
T ss_pred CEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccccccccccCCEEECCCCcCCc-chhhhcccCcccEEE
Confidence 9999999999987777764 789999999999999977555589999999999999995 555588888887764
No 354
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.51 E-value=2.2e-14 Score=145.69 Aligned_cols=122 Identities=25% Similarity=0.397 Sum_probs=58.4
Q ss_pred cEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhc-ccccccccc
Q 006886 70 RVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALDLS 148 (627)
Q Consensus 70 ~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~L~ls 148 (627)
+++.|++++|+++ .+| .+..+++|+.|+|++|.+++..+ +..+++|++|+|++|++++.. .+.. .+|+.|+|+
T Consensus 42 ~L~~L~l~~~~i~-~l~--~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~~-~~~~l~~L~~L~l~ 115 (308)
T 1h6u_A 42 GITTLSAFGTGVT-TIE--GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNVS-AIAGLQSIKTLDLT 115 (308)
T ss_dssp TCCEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCCG-GGTTCTTCCEEECT
T ss_pred CcCEEEeeCCCcc-Cch--hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCch-hhcCCCCCCEEECC
Confidence 3455555555554 233 24455555555555555553222 555555555555555555432 2222 245555555
Q ss_pred ccccccCCccccccccccccccccCCcccccCCCCCCCccceeeccCCCcc
Q 006886 149 FNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLN 199 (627)
Q Consensus 149 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~l~~N~l~ 199 (627)
+|++++ +|. +..+++|+.|++++|++++..+-..+++|+.|++++|+++
T Consensus 116 ~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~ 164 (308)
T 1h6u_A 116 STQITD-VTP-LAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVS 164 (308)
T ss_dssp TSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCCCCC-chh-hcCCCCCCEEECCCCccCcCccccCCCCccEEEccCCcCC
Confidence 555553 222 4555555555555555554333224455555555555554
No 355
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.51 E-value=1.6e-14 Score=159.61 Aligned_cols=139 Identities=23% Similarity=0.260 Sum_probs=117.1
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhcccccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQLNALDLS 148 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~ls 148 (627)
.+++.|+|++|++++. ++..|.++++|+.|+|++|.|++..|..|.++++|++|+|++|+|+.+++. ...+|++|+|+
T Consensus 52 ~~L~~L~Ls~N~i~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~-~l~~L~~L~Ls 129 (562)
T 3a79_B 52 PRTKALSLSQNSISEL-RMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNISCC-PMASLRHLDLS 129 (562)
T ss_dssp TTCCEEECCSSCCCCC-CGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCEECSC-CCTTCSEEECC
T ss_pred CCcCEEECCCCCcccc-ChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCccCcc-ccccCCEEECC
Confidence 6799999999999954 444899999999999999999988899999999999999999999976665 34589999999
Q ss_pred cccccc-CCccccccccccccccccCCcccccCCCCCCCcc--ceeeccCCCc--cccCCCCCCCCC
Q 006886 149 FNAFTG-NIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRL--KILNFSNNNL--NGSIPDSLQTFP 210 (627)
Q Consensus 149 ~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L--~~L~l~~N~l--~~~~p~~~~~~~ 210 (627)
+|++++ .+|..|+++++|++|++++|++++. ....+++| +.|++++|.+ ++..|..+..+.
T Consensus 130 ~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~-~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~ 195 (562)
T 3a79_B 130 FNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL-DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPN 195 (562)
T ss_dssp SSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT-TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECC
T ss_pred CCCccccCchHhhcccCcccEEecCCCccccC-chhhhhhceeeEEEeecccccccccCcccccccC
Confidence 999996 3568999999999999999999862 22355555 9999999999 888888777665
No 356
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.50 E-value=2.8e-15 Score=155.58 Aligned_cols=146 Identities=19% Similarity=0.218 Sum_probs=120.8
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCc-h-hhc-ccccc
Q 006886 68 RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLP-A-FRS-LQLNA 144 (627)
Q Consensus 68 ~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~-~~~-~~L~~ 144 (627)
-.+++.|+|++|++++..|. .|.++++|+.|+|++|.|++..+..|..+++|++|+|++|+++++++ . +.. .+|+.
T Consensus 75 l~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~ 153 (353)
T 2z80_A 75 CVNLQALVLTSNGINTIEED-SFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQI 153 (353)
T ss_dssp CTTCCEEECTTSCCCEECTT-TTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCE
T ss_pred CCCCCEEECCCCccCccCHh-hcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcE
Confidence 36799999999999965555 89999999999999999995444458999999999999999998877 3 333 48999
Q ss_pred cccccc-ccccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCCC-CCCCCCCCccc
Q 006886 145 LDLSFN-AFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPD-SLQTFPNSSFV 215 (627)
Q Consensus 145 L~ls~N-~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~-~~~~~~~l~~~ 215 (627)
|++++| .+++..|..|.++++|+.|++++|++++..|.. .+++|++|++++|.++ .+|. .+..+++|+.+
T Consensus 154 L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L 227 (353)
T 2z80_A 154 LRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECL 227 (353)
T ss_dssp EEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEE
T ss_pred EECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEE
Confidence 999999 577666788999999999999999999887764 8999999999999997 4443 33345555554
No 357
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.50 E-value=2.2e-15 Score=170.75 Aligned_cols=140 Identities=24% Similarity=0.298 Sum_probs=118.1
Q ss_pred CCCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhcc-ccccc
Q 006886 67 NRSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSL-QLNAL 145 (627)
Q Consensus 67 ~~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-~L~~L 145 (627)
....++.|+|++|.+. .+|. .+.++++|+.|+|++|.|+ .+|..|++|++|++|+|++|+|+.++..+..+ +|+.|
T Consensus 222 ~l~~L~~L~Ls~n~l~-~l~~-~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L 298 (727)
T 4b8c_D 222 DDQLWHALDLSNLQIF-NISA-NIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYF 298 (727)
T ss_dssp CCCCCCEEECTTSCCS-CCCG-GGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEE
T ss_pred cCCCCcEEECCCCCCC-CCCh-hhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEE
Confidence 3467999999999998 8888 5679999999999999999 89999999999999999999999765566554 89999
Q ss_pred cccccccccCCccccccccccccccccCCcccccCCCC--CC-CccceeeccCCCccccCCCCCCCCC
Q 006886 146 DLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NL-PRLKILNFSNNNLNGSIPDSLQTFP 210 (627)
Q Consensus 146 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~-~~L~~L~l~~N~l~~~~p~~~~~~~ 210 (627)
+|++|.|+ .+|..|++|++|+.|+|++|+|++.+|.. .+ ..+..|+|++|.++|.+|..+..+.
T Consensus 299 ~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~~l~ 365 (727)
T 4b8c_D 299 YFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERRFIE 365 (727)
T ss_dssp ECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-----
T ss_pred ECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccccceeE
Confidence 99999998 78999999999999999999999988754 12 1223578999999999998776553
No 358
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.50 E-value=2e-14 Score=133.36 Aligned_cols=125 Identities=17% Similarity=0.299 Sum_probs=104.3
Q ss_pred CcEEEEEcCCCCcccccCccccCCCC-cccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchh-hc-cccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLD-ALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAF-RS-LQLNAL 145 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~-~~L~~L 145 (627)
..++.|+|++|+++ .+|. +..+. +|+.|+|++|.|++. ..|..+++|++|+|++|+|+++++.. .. .+|+.|
T Consensus 19 ~~L~~L~l~~n~l~-~i~~--~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 19 VRDRELDLRGYKIP-VIEN--LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 93 (176)
T ss_dssp TSCEEEECTTSCCC-SCCC--GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred CCceEEEeeCCCCc-hhHH--hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEE
Confidence 57899999999998 5654 55544 999999999999965 68999999999999999999887765 33 489999
Q ss_pred cccccccccCCcc--ccccccccccccccCCcccccCCC----C-CCCccceeeccCCCcc
Q 006886 146 DLSFNAFTGNIPP--GFQNLTRLHLLNLQNNSISGAIPP----L-NLPRLKILNFSNNNLN 199 (627)
Q Consensus 146 ~ls~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~----~-~~~~L~~L~l~~N~l~ 199 (627)
+|++|+|+ .+|. .+..+++|+.|++++|.++...+. . .+++|+.|++++|.+.
T Consensus 94 ~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 94 ILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp ECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 99999997 5776 788999999999999999854332 2 7899999999999876
No 359
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.50 E-value=3.7e-14 Score=156.75 Aligned_cols=138 Identities=27% Similarity=0.366 Sum_probs=117.9
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhc-cccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALDL 147 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~L~l 147 (627)
.+++.|+|++|++++ +++ +..+++|+.|+|++|.|++ +| .|..+++|++|+|++|+|.++ +.+.. .+|+.|+|
T Consensus 65 ~~L~~L~Ls~N~l~~-~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~L 138 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTD-IKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISDI-NGLVHLPQLESLYL 138 (605)
T ss_dssp TTCCEEECTTSCCCC-CGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCCC-GGGGGCTTCSEEEC
T ss_pred CCCCEEEeeCCCCCC-Chh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCCC-ccccCCCccCEEEC
Confidence 679999999999995 443 8999999999999999985 44 799999999999999999986 44444 48999999
Q ss_pred cccccccCCccccccccccccccccCCcccccCCCCCCCccceeeccCCCccccCCCCCCCCCCCcccC
Q 006886 148 SFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
++|.|++. ..+..+++|+.|+|++|+|++..|...+++|+.|+|++|+|++. | .+..+++|..++
T Consensus 139 s~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~ 203 (605)
T 1m9s_A 139 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLE 203 (605)
T ss_dssp CSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEE
T ss_pred CCCccCCc--hhhcccCCCCEEECcCCcCCCchhhccCCCCCEEECcCCCCCCC-h-HHccCCCCCEEE
Confidence 99999964 67999999999999999999887755899999999999999864 3 577788877654
No 360
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.47 E-value=4.1e-14 Score=155.50 Aligned_cols=117 Identities=26% Similarity=0.284 Sum_probs=69.2
Q ss_pred EEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhcc-ccccccccc
Q 006886 71 VIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSL-QLNALDLSF 149 (627)
Q Consensus 71 v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-~L~~L~ls~ 149 (627)
++.|+|++|+|++ +|. |+.+++|+.|+|++|.|+ .+|..|+.+++|++|+|++|+|++++ .+..+ +|+.|+|++
T Consensus 443 L~~L~Ls~n~l~~-lp~--~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp-~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH--LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENVD-GVANLPRLQELLLCN 517 (567)
T ss_dssp CSEEECTTSCCSS-CCC--GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCG-GGTTCSSCCEEECCS
T ss_pred ceEEEecCCCCCC-CcC--ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCCCc-ccCCCCCCcEEECCC
Confidence 4556666666663 443 666666666666666666 55666666666666666666666633 33332 566666666
Q ss_pred cccccCC-ccccccccccccccccCCcccccCCCC-----CCCccceee
Q 006886 150 NAFTGNI-PPGFQNLTRLHLLNLQNNSISGAIPPL-----NLPRLKILN 192 (627)
Q Consensus 150 N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p~~-----~~~~L~~L~ 192 (627)
|+|++.. |..|+.+++|+.|+|++|+|++.+|.. .+++|+.|+
T Consensus 518 N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~ 566 (567)
T 1dce_A 518 NRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSIL 566 (567)
T ss_dssp SCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEE
T ss_pred CCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccC
Confidence 6666544 666666666666666666666554432 255555554
No 361
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.45 E-value=1.2e-13 Score=148.75 Aligned_cols=138 Identities=27% Similarity=0.373 Sum_probs=92.9
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhcccccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQLNALDLS 148 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~ls 148 (627)
.+++.|+|++|++++ ++ .+..+++|+.|+|++|.+++..| +..+++|++|+|++|++++.++-....+|+.|+|+
T Consensus 221 ~~L~~L~l~~n~l~~-~~--~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~ 295 (466)
T 1o6v_A 221 TNLDELSLNGNQLKD-IG--TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELN 295 (466)
T ss_dssp TTCCEEECCSSCCCC-CG--GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECC
T ss_pred CCCCEEECCCCCccc-ch--hhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCccccccCCCccCeEEcC
Confidence 567788888887774 32 47777777777887777775544 77777777777777777776652222367777777
Q ss_pred ccccccCCccccccccccccccccCCcccccCCCCCCCccceeeccCCCccccCCCCCCCCCCCccc
Q 006886 149 FNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV 215 (627)
Q Consensus 149 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~ 215 (627)
+|++++..| +..+++|+.|++++|++++..|...+++|+.|++++|++++. ..+..+++|+.+
T Consensus 296 ~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 358 (466)
T 1o6v_A 296 ENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV--SSLANLTNINWL 358 (466)
T ss_dssp SSCCSCCGG--GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEE
T ss_pred CCcccCchh--hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccCCc--hhhccCCCCCEE
Confidence 777775333 667777777777777777665544667777777777777653 345566665554
No 362
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.45 E-value=6.4e-14 Score=154.87 Aligned_cols=137 Identities=23% Similarity=0.386 Sum_probs=118.0
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhc-cccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALDL 147 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~L~l 147 (627)
.+++.|+|++|++. .++ .+..|++|+.|+|++|.|++..| +..+++|+.|+|++|+|.+++ .+.. .+|+.|+|
T Consensus 43 ~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-~l~~l~~L~~L~L 116 (605)
T 1m9s_A 43 NSIDQIIANNSDIK-SVQ--GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDLS-SLKDLKKLKSLSL 116 (605)
T ss_dssp TTCCCCBCTTCCCC-CCT--TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCT-TSTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCC-CCh--HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCCh-hhccCCCCCEEEe
Confidence 56889999999998 455 48999999999999999996555 999999999999999999864 4444 48999999
Q ss_pred cccccccCCccccccccccccccccCCcccccCCCC-CCCccceeeccCCCccccCCCCCCCCCCCcccC
Q 006886 148 SFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL-NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
++|.|++ + +.+..|++|+.|+|++|+|++. +.. .+++|+.|+|++|.|++..| +..+++|..++
T Consensus 117 s~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 181 (605)
T 1m9s_A 117 EHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLY 181 (605)
T ss_dssp TTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred cCCCCCC-C-ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEE
Confidence 9999995 4 4599999999999999999976 433 89999999999999997766 88888887764
No 363
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.44 E-value=2.4e-13 Score=125.64 Aligned_cols=104 Identities=24% Similarity=0.297 Sum_probs=82.8
Q ss_pred EEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhh-c-cccccccccc
Q 006886 72 IGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFR-S-LQLNALDLSF 149 (627)
Q Consensus 72 ~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~-~-~~L~~L~ls~ 149 (627)
+.+++++|+++ .+|. .+. ++|+.|+|++|.|++..|..|..+++|++|+|++|+|+++++..+ . .+|+.|+|++
T Consensus 15 ~~l~~~~n~l~-~iP~-~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPA-GIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCCS-SCCS-CCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCCC-ccCC-CcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 57899999996 7887 443 889999999999998888899999999999999999998777643 3 3788888888
Q ss_pred cccccCCccccccccccccccccCCccccc
Q 006886 150 NAFTGNIPPGFQNLTRLHLLNLQNNSISGA 179 (627)
Q Consensus 150 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 179 (627)
|+|++..+..|..+++|+.|+|++|.+...
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 888754444577777777777777777643
No 364
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.44 E-value=1.4e-13 Score=150.65 Aligned_cols=118 Identities=25% Similarity=0.361 Sum_probs=81.1
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhcccccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQLNALDLS 148 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~ls 148 (627)
.+++.|+|++|+|+ .+| ..+++|+.|+|++|.|++ +|. |.. +|++|+|++|+|+++++ ...+|+.|+|+
T Consensus 80 ~~L~~L~Ls~N~l~-~ip----~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~lp~--~l~~L~~L~Ls 148 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP----ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTMLPE--LPALLEYINAD 148 (571)
T ss_dssp TTCSEEECCSSCCS-CCC----CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSCCCC--CCTTCCEEECC
T ss_pred CCCCEEECcCCCCc-ccc----cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCCCCC--cCccccEEeCC
Confidence 45788888888887 566 346777888888888875 666 554 77777777777777544 33467777777
Q ss_pred ccccccCCccccccccccccccccCCcccccCCCCCCCccceeeccCCCccccCCC
Q 006886 149 FNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSIPD 204 (627)
Q Consensus 149 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~ 204 (627)
+|+|++ +|. .+++|+.|+|++|+|++ +|... ++|+.|+|++|+|+ .+|.
T Consensus 149 ~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~l~-~~L~~L~Ls~N~L~-~lp~ 197 (571)
T 3cvr_A 149 NNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPELP-ESLEALDVSTNLLE-SLPA 197 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCCCC-TTCCEEECCSSCCS-SCCC
T ss_pred CCccCc-CCC---cCCCcCEEECCCCCCCC-cchhh-CCCCEEECcCCCCC-chhh
Confidence 777774 555 45677777777777776 44333 66777777777776 5555
No 365
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.44 E-value=1.8e-13 Score=126.01 Aligned_cols=104 Identities=23% Similarity=0.278 Sum_probs=80.3
Q ss_pred EEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhh-c-cccccccccc
Q 006886 72 IGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFR-S-LQLNALDLSF 149 (627)
Q Consensus 72 ~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~-~-~~L~~L~ls~ 149 (627)
+.|++++|+++ .+|. .+ .++|+.|+|++|.|++..|..|..+++|++|+|++|+|+++++..+ . .+|+.|+|++
T Consensus 12 ~~l~~s~n~l~-~ip~-~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPT-GI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TEEECTTSCCS-SCCS-CC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCc-cC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 46888888888 5776 34 3889999999999998888889999999999999999988777543 2 3677777777
Q ss_pred cccccCCccccccccccccccccCCccccc
Q 006886 150 NAFTGNIPPGFQNLTRLHLLNLQNNSISGA 179 (627)
Q Consensus 150 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 179 (627)
|+|++..|..|.++++|+.|+|++|.++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 777755555577777777777777777643
No 366
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.43 E-value=2.2e-13 Score=125.39 Aligned_cols=105 Identities=26% Similarity=0.304 Sum_probs=91.2
Q ss_pred ccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhh-c-cccccccccccccccCCccccccccccccccccC
Q 006886 96 LKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFR-S-LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQN 173 (627)
Q Consensus 96 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~-~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~ 173 (627)
.+.|++++|.|+ .+|..+. ++|++|+|++|+|++++|..+ . .+|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 468999999999 6887774 899999999999999988644 3 3899999999999977677789999999999999
Q ss_pred CcccccCCCC--CCCccceeeccCCCccccCC
Q 006886 174 NSISGAIPPL--NLPRLKILNFSNNNLNGSIP 203 (627)
Q Consensus 174 N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p 203 (627)
|+|++..+.. .+++|+.|+|++|+++...+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9999877653 89999999999999986543
No 367
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.42 E-value=3.3e-14 Score=152.33 Aligned_cols=135 Identities=19% Similarity=0.182 Sum_probs=77.3
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccc-------------cEEeeecccccccCc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSL-------------QYVYLQNNYFSGVLP 135 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L-------------~~L~l~~N~l~~~~~ 135 (627)
.+++.|++++|++ |.+|+ .+++|++|+.|+|++|.++|.+|..++.+++| ++|++++|.+++++.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~-~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPV-EAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPE 88 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCS
T ss_pred ccchhhhcccCch-hhCCh-hHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCC
Confidence 5789999999999 79998 79999999999999999999999999988875 888888888887654
Q ss_pred hhhccccccccccccccccCCccccccccccccccccCCcccccCCCCCCCccceeeccCCCccccCCCCCCCCCCCccc
Q 006886 136 AFRSLQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV 215 (627)
Q Consensus 136 ~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~ 215 (627)
...+|+.|++++|.+++ +|..+ ++|+.|++++|++++ +|.. .++|++|++++|++++ +| .++++++|+.+
T Consensus 89 --~~~~L~~L~l~~n~l~~-lp~~~---~~L~~L~l~~n~l~~-l~~~-~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L 158 (454)
T 1jl5_A 89 --LPPHLESLVASCNSLTE-LPELP---QSLKSLLVDNNNLKA-LSDL-PPLLEYLGVSNNQLEK-LP-ELQNSSFLKII 158 (454)
T ss_dssp --CCTTCSEEECCSSCCSS-CCCCC---TTCCEEECCSSCCSC-CCSC-CTTCCEEECCSSCCSS-CC-CCTTCTTCCEE
T ss_pred --CcCCCCEEEccCCcCCc-ccccc---CCCcEEECCCCccCc-ccCC-CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEE
Confidence 22467777777777775 56432 556666666666664 2211 1466666666666664 55 35555555554
No 368
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.42 E-value=6.6e-14 Score=129.78 Aligned_cols=125 Identities=18% Similarity=0.143 Sum_probs=103.1
Q ss_pred ccCCCCcccEEEccCcccCccCCCCCCCcc-cccEEeeecccccccCchhhc-cccccccccccccccCCcccccccccc
Q 006886 89 SIGKLDALKILSLRSNYLNGTLPSDITSIS-SLQYVYLQNNYFSGVLPAFRS-LQLNALDLSFNAFTGNIPPGFQNLTRL 166 (627)
Q Consensus 89 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~~~~~~-~~L~~L~ls~N~l~~~~p~~~~~l~~L 166 (627)
.+.++++|+.|+|++|.++ .+|. +..+. +|++|+|++|+|+++ +.+.. .+|+.|+|++|+|++..|..|..+++|
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 4778899999999999999 4564 66655 999999999999987 55544 389999999999996544556999999
Q ss_pred ccccccCCcccccCC--CC-CCCccceeeccCCCccccCCCC----CCCCCCCcccCC
Q 006886 167 HLLNLQNNSISGAIP--PL-NLPRLKILNFSNNNLNGSIPDS----LQTFPNSSFVGN 217 (627)
Q Consensus 167 ~~L~l~~N~l~~~~p--~~-~~~~L~~L~l~~N~l~~~~p~~----~~~~~~l~~~~n 217 (627)
++|++++|+|+...+ .. .+++|+.|++++|+++ .+|.. +..+++|++++.
T Consensus 91 ~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~ 147 (176)
T 1a9n_A 91 TELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDF 147 (176)
T ss_dssp CEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETT
T ss_pred CEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCC
Confidence 999999999975333 22 7899999999999998 66764 888888888764
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.42 E-value=2e-13 Score=135.27 Aligned_cols=124 Identities=21% Similarity=0.318 Sum_probs=106.0
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhc-cccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALDL 147 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~L~l 147 (627)
.+++.|+|++|++++ +++ +.++++|+.|+|++|++++ +|. +.. ++|++|+|++|++++.. .+.. .+|+.|+|
T Consensus 63 ~~L~~L~L~~N~i~~-~~~--l~~l~~L~~L~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~~~-~l~~l~~L~~L~L 135 (263)
T 1xeu_A 63 TNLKELHLSHNQISD-LSP--LKDLTKLEELSVNRNRLKN-LNG-IPS-ACLSRLFLDNNELRDTD-SLIHLKNLEILSI 135 (263)
T ss_dssp TTCCEEECCSSCCCC-CGG--GTTCSSCCEEECCSSCCSC-CTT-CCC-SSCCEEECCSSCCSBSG-GGTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCC-Chh--hccCCCCCEEECCCCccCC-cCc-ccc-CcccEEEccCCccCCCh-hhcCcccccEEEC
Confidence 679999999999995 444 9999999999999999995 554 333 99999999999999864 4444 48999999
Q ss_pred cccccccCCccccccccccccccccCCcccccCCCCCCCccceeeccCCCcccc
Q 006886 148 SFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGS 201 (627)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~l~~N~l~~~ 201 (627)
++|+|++ +| .+..+++|+.|++++|+|++...-..+++|+.|++++|++++.
T Consensus 136 s~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 136 RNNKLKS-IV-MLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp TTSCCCB-CG-GGGGCTTCCEEECTTSCCCBCTTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCcCCC-Ch-HHccCCCCCEEECCCCcCcchHHhccCCCCCEEeCCCCcccCC
Confidence 9999996 55 6999999999999999999872233899999999999999855
No 370
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.40 E-value=2.4e-13 Score=140.39 Aligned_cols=139 Identities=23% Similarity=0.353 Sum_probs=101.9
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhc-cccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALDL 147 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~L~l 147 (627)
.+++.|++++|++.+ ++. +..+++|+.|++++|.+++..+ +..+++|++|+|++|++++..+ +.. .+|+.|++
T Consensus 177 ~~L~~L~l~~n~l~~-~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l 250 (347)
T 4fmz_A 177 TDLYSLSLNYNQIED-ISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP-LANLSQLTWLEI 250 (347)
T ss_dssp TTCSEEECTTSCCCC-CGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCcccc-ccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc-hhcCCCCCEEEC
Confidence 578889999888874 433 7778888888888888875444 7778888888888888887766 333 37888888
Q ss_pred cccccccCCccccccccccccccccCCcccccCCCC-CCCccceeeccCCCccccCCCCCCCCCCCcccC
Q 006886 148 SFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL-NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
++|.+++ + +.+..+++|+.|++++|++++. +.. .+++|+.|++++|++++..|..+..+++|+.++
T Consensus 251 ~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 317 (347)
T 4fmz_A 251 GTNQISD-I-NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLF 317 (347)
T ss_dssp CSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEE
T ss_pred CCCccCC-C-hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEE
Confidence 8888874 3 3577778888888888887764 332 677888888888888777777777777766553
No 371
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.40 E-value=5.7e-13 Score=123.12 Aligned_cols=102 Identities=24% Similarity=0.326 Sum_probs=88.5
Q ss_pred cEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhh-c-cccccccccccccccCCccccccccccccccccCC
Q 006886 97 KILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFR-S-LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNN 174 (627)
Q Consensus 97 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~-~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N 174 (627)
+.+++++|.++ .+|..+. ++|++|+|++|+|++++|..+ . .+|+.|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 68999999997 7888775 899999999999999988644 3 38999999999999765566899999999999999
Q ss_pred cccccCCCC--CCCccceeeccCCCcccc
Q 006886 175 SISGAIPPL--NLPRLKILNFSNNNLNGS 201 (627)
Q Consensus 175 ~l~~~~p~~--~~~~L~~L~l~~N~l~~~ 201 (627)
+|++.++.. .+++|+.|+|++|++...
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 999766653 799999999999999843
No 372
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.39 E-value=1.3e-13 Score=152.64 Aligned_cols=145 Identities=21% Similarity=0.293 Sum_probs=90.3
Q ss_pred CCCCCCCCCCCCcceEe------eCCCCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCccccc
Q 006886 48 NWNAAAPVCSSWIGVTC------NVNRSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQ 121 (627)
Q Consensus 48 ~W~~~~~~c~~w~gv~C------~~~~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 121 (627)
+|....++| .|.|..| .+....++.|++++|+++ .+|. .+. ++|+.|+|++|+|+ .+|. .+++|+
T Consensus 14 ~W~~~~~~~-~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~-~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~ 84 (622)
T 3g06_A 14 AWRRAAPAE-ESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPD-CLP--AHITTLVIPDNNLT-SLPA---LPPELR 84 (622)
T ss_dssp HHHHTCCGG-GHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCS-CCC--TTCSEEEECSCCCS-CCCC---CCTTCC
T ss_pred HHHhcCCcc-hhccccccCcccccccCCCCcEEEecCCCcC-ccCh-hhC--CCCcEEEecCCCCC-CCCC---cCCCCC
Confidence 465444444 6865322 112235778888888887 7776 343 67888888888887 5665 467788
Q ss_pred EEeeecccccccCchhhccccccccccccccccCCccccccccccccccccCCcccccCCCCCCCccceeeccCCCcccc
Q 006886 122 YVYLQNNYFSGVLPAFRSLQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGS 201 (627)
Q Consensus 122 ~L~l~~N~l~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~l~~N~l~~~ 201 (627)
+|+|++|+|+++++ ...+|++|+|++|+|++ +|. .+++|+.|++++|+|++ +|. .+++|++|++++|++++
T Consensus 85 ~L~Ls~N~l~~lp~--~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~-~l~~L~~L~Ls~N~l~~- 155 (622)
T 3g06_A 85 TLEVSGNQLTSLPV--LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPV-LPPGLQELSVSDNQLAS- 155 (622)
T ss_dssp EEEECSCCCSCCCC--CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCSC-
T ss_pred EEEcCCCcCCcCCC--CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCC-CCCCCCEEECcCCcCCC-
Confidence 88888888776555 23467777777777774 444 44566667777776664 332 24666666666666663
Q ss_pred CCCCCCCCC
Q 006886 202 IPDSLQTFP 210 (627)
Q Consensus 202 ~p~~~~~~~ 210 (627)
+|..+.++.
T Consensus 156 l~~~~~~L~ 164 (622)
T 3g06_A 156 LPALPSELC 164 (622)
T ss_dssp CCCCCTTCC
T ss_pred cCCccCCCC
Confidence 344333333
No 373
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.39 E-value=4.5e-13 Score=144.33 Aligned_cols=138 Identities=25% Similarity=0.350 Sum_probs=104.8
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhcccccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQLNALDLS 148 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~ls 148 (627)
.+++.|++++|.+++..| ++.+++|+.|+|++|.+++ + +.+..+++|++|+|++|++++..+-....+|+.|+++
T Consensus 199 ~~L~~L~l~~n~l~~~~~---~~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~ 273 (466)
T 1o6v_A 199 TNLESLIATNNQISDITP---LGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 273 (466)
T ss_dssp TTCSEEECCSSCCCCCGG---GGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCSEEECC
T ss_pred CCCCEEEecCCccccccc---ccccCCCCEEECCCCCccc-c-hhhhcCCCCCEEECCCCccccchhhhcCCCCCEEECC
Confidence 578888888888885443 6778888888888888874 3 3577888888888888888887762222478888888
Q ss_pred ccccccCCccccccccccccccccCCcccccCCCCCCCccceeeccCCCccccCCCCCCCCCCCccc
Q 006886 149 FNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV 215 (627)
Q Consensus 149 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~ 215 (627)
+|.+++. |. +..+++|+.|++++|++++..+...+++|+.|++++|++++..| +..+++|+.+
T Consensus 274 ~n~l~~~-~~-~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L 336 (466)
T 1o6v_A 274 ANQISNI-SP-LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRL 336 (466)
T ss_dssp SSCCCCC-GG-GTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEE
T ss_pred CCccCcc-cc-ccCCCccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCCchh--hccCccCCEe
Confidence 8888854 33 78888888888888888876554478888888888888887655 5566666554
No 374
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.39 E-value=3e-13 Score=139.72 Aligned_cols=139 Identities=20% Similarity=0.288 Sum_probs=116.0
Q ss_pred CCcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhc-ccccccc
Q 006886 68 RSRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALD 146 (627)
Q Consensus 68 ~~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~L~ 146 (627)
...++.|++++|++++.. . +..+++|+.|+|++|.+++..+ +..+++|++|+|++|.+++. +.+.. .+|+.|+
T Consensus 198 l~~L~~L~l~~n~l~~~~-~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~ 271 (347)
T 4fmz_A 198 LTSLHYFTAYVNQITDIT-P--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI-NAVKDLTKLKMLN 271 (347)
T ss_dssp CTTCCEEECCSSCCCCCG-G--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-GGGTTCTTCCEEE
T ss_pred CCccceeecccCCCCCCc-h--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC-hhHhcCCCcCEEE
Confidence 367899999999998543 2 8899999999999999995444 89999999999999999986 44433 4899999
Q ss_pred ccccccccCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCCCCCCCCCCCcccC
Q 006886 147 LSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
+++|.+++ + +.+..+++|+.|++++|++++..|.. .+++|+.|++++|++++..| +..+++|+.++
T Consensus 272 l~~n~l~~-~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 339 (347)
T 4fmz_A 272 VGSNQISD-I-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSAD 339 (347)
T ss_dssp CCSSCCCC-C-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEES
T ss_pred ccCCccCC-C-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceee
Confidence 99999996 4 45889999999999999999877653 89999999999999997766 66677776654
No 375
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.38 E-value=6.9e-13 Score=142.22 Aligned_cols=100 Identities=18% Similarity=0.193 Sum_probs=62.3
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhc-cccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALDL 147 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~L~l 147 (627)
..++.|++++|+..+.+ .+..+++|+.|+|++|++++ +| +..+++|++|+|++|++++. + +.. .+|+.|+|
T Consensus 148 ~~L~~L~l~~n~~~~~~---~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~-l~~l~~L~~L~L 219 (457)
T 3bz5_A 148 TQLTELDCHLNKKITKL---DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL-D-LNQNIQLTFLDC 219 (457)
T ss_dssp TTCCEEECTTCSCCCCC---CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC-C-CTTCTTCSEEEC
T ss_pred CcCCEEECCCCCccccc---ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee-c-cccCCCCCEEEC
Confidence 45667777777655555 25666677777777777764 44 66666666666666666665 1 222 35666666
Q ss_pred cccccccCCccccccccccccccccCCccccc
Q 006886 148 SFNAFTGNIPPGFQNLTRLHLLNLQNNSISGA 179 (627)
Q Consensus 148 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 179 (627)
++|+|++ +| +..+++|+.|++++|+|++.
T Consensus 220 s~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~ 248 (457)
T 3bz5_A 220 SSNKLTE-ID--VTPLTQLTYFDCSVNPLTEL 248 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCSEEECCSSCCSCC
T ss_pred cCCcccc-cC--ccccCCCCEEEeeCCcCCCc
Confidence 6666665 44 56666666666666666653
No 376
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.38 E-value=9.9e-13 Score=140.98 Aligned_cols=116 Identities=21% Similarity=0.252 Sum_probs=54.1
Q ss_pred cEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhc-ccccccccc
Q 006886 70 RVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALDLS 148 (627)
Q Consensus 70 ~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~L~ls 148 (627)
+++.|+|++|++++ +| .++.+++|+.|+|++|.|++ +| ++.+++|++|+|++|++++.. +.. .+|++|+|+
T Consensus 43 ~L~~L~Ls~n~l~~-~~--~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~~--~~~l~~L~~L~L~ 114 (457)
T 3bz5_A 43 TLTSLDCHNSSITD-MT--GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNLD--VTPLTKLTYLNCD 114 (457)
T ss_dssp TCCEEECCSSCCCC-CT--TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC--CTTCTTCCEEECC
T ss_pred CCCEEEccCCCccc-Ch--hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCceee--cCCCCcCCEEECC
Confidence 45555555555553 23 24555555555555555553 22 445555555555555555431 222 245555555
Q ss_pred ccccccCCccccccccccccccccCCcccccCCCCCCCccceeeccCCC
Q 006886 149 FNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNN 197 (627)
Q Consensus 149 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~l~~N~ 197 (627)
+|++++ +| ++.+++|++|++++|+|++ ++...+++|++|++++|+
T Consensus 115 ~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~l~~l~~L~~L~l~~n~ 159 (457)
T 3bz5_A 115 TNKLTK-LD--VSQNPLLTYLNCARNTLTE-IDVSHNTQLTELDCHLNK 159 (457)
T ss_dssp SSCCSC-CC--CTTCTTCCEEECTTSCCSC-CCCTTCTTCCEEECTTCS
T ss_pred CCcCCe-ec--CCCCCcCCEEECCCCccce-eccccCCcCCEEECCCCC
Confidence 555553 22 4445555555555555544 222244444444444443
No 377
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.37 E-value=6.3e-13 Score=146.01 Aligned_cols=104 Identities=29% Similarity=0.363 Sum_probs=69.7
Q ss_pred ccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhcc-ccccccccccccccCCccccccccccccccccCC
Q 006886 96 LKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSL-QLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNN 174 (627)
Q Consensus 96 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N 174 (627)
|+.|+|++|.|++ +|. |+.+++|++|+|++|+|+.+++.+..+ +|+.|+|++|+|++ +| .|+++++|+.|+|++|
T Consensus 443 L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N 518 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN 518 (567)
T ss_dssp CSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred ceEEEecCCCCCC-CcC-ccccccCcEeecCcccccccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCC
Confidence 5567777777774 565 777777777777777777554444443 67777777777774 56 6777777777777777
Q ss_pred cccccC-CCC--CCCccceeeccCCCccccCC
Q 006886 175 SISGAI-PPL--NLPRLKILNFSNNNLNGSIP 203 (627)
Q Consensus 175 ~l~~~~-p~~--~~~~L~~L~l~~N~l~~~~p 203 (627)
+|++.+ |.. .+++|+.|+|++|+|++.+|
T Consensus 519 ~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 519 RLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 777654 433 67777777777777775544
No 378
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.35 E-value=2.2e-12 Score=138.23 Aligned_cols=132 Identities=23% Similarity=0.310 Sum_probs=96.3
Q ss_pred cEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhccccccccccc
Q 006886 70 RVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRSLQLNALDLSF 149 (627)
Q Consensus 70 ~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~ls~ 149 (627)
.++.|++++|++++ +|. ..++|+.|+|++|.+++ +| .|+.+++|++|++++|++++++... .+|++|++++
T Consensus 112 ~L~~L~l~~n~l~~-l~~----~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~lp~~~--~~L~~L~L~~ 182 (454)
T 1jl5_A 112 SLKSLLVDNNNLKA-LSD----LPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKKLPDLP--PSLEFIAAGN 182 (454)
T ss_dssp TCCEEECCSSCCSC-CCS----CCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSCCCCCC--TTCCEEECCS
T ss_pred CCcEEECCCCccCc-ccC----CCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcccCCCc--ccccEEECcC
Confidence 45555555555542 222 11578888888888885 77 5888888999999988888754322 3788899999
Q ss_pred cccccCCccccccccccccccccCCcccccCCCCCCCccceeeccCCCccccCCCCCCCCCCCcccC
Q 006886 150 NAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 150 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
|++++ +| .++++++|+.|++++|++++ +|.. .++|+.|++++|.++ .+|+ +..+++|+.++
T Consensus 183 n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~-~~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~ 243 (454)
T 1jl5_A 183 NQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL-PLSLESIVAGNNILE-ELPE-LQNLPFLTTIY 243 (454)
T ss_dssp SCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC-CTTCCEEECCSSCCS-SCCC-CTTCTTCCEEE
T ss_pred CcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC-cCcccEEECcCCcCC-cccc-cCCCCCCCEEE
Confidence 98886 66 58888889999999998886 3332 358888888888888 6774 77777777664
No 379
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.34 E-value=2.8e-14 Score=146.70 Aligned_cols=147 Identities=20% Similarity=0.274 Sum_probs=77.2
Q ss_pred CcEEEEEcCCCCcccc-cCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecc-ccccc-Cch-hhc-cccc
Q 006886 69 SRVIGIHLPGIGFTGP-IPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNN-YFSGV-LPA-FRS-LQLN 143 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~-~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N-~l~~~-~~~-~~~-~~L~ 143 (627)
.+++.|+|++|.+++. ++. .+..+++|+.|+|++|.+++..|..+..+++|++|+|++| .+++. ++. +.. .+|+
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~-~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~ 171 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHG-ILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 171 (336)
T ss_dssp BCCCEEECTTCEECHHHHHH-HHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCEEEccCCCcCHHHHHH-HHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCC
Confidence 3455555555555443 443 4555555555555555555555555555555555555555 44431 222 211 2566
Q ss_pred ccccccc-ccccC-Ccccccccc-ccccccccCC--ccc-ccCCCC--CCCccceeeccCCC-ccccCCCCCCCCCCCcc
Q 006886 144 ALDLSFN-AFTGN-IPPGFQNLT-RLHLLNLQNN--SIS-GAIPPL--NLPRLKILNFSNNN-LNGSIPDSLQTFPNSSF 214 (627)
Q Consensus 144 ~L~ls~N-~l~~~-~p~~~~~l~-~L~~L~l~~N--~l~-~~~p~~--~~~~L~~L~l~~N~-l~~~~p~~~~~~~~l~~ 214 (627)
.|+|++| .+++. ++..+..++ +|++|++++| .++ +.+|.. .+++|+.|++++|. +++..+..+..+++|+.
T Consensus 172 ~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~ 251 (336)
T 2ast_B 172 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQH 251 (336)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCE
T ss_pred EEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCE
Confidence 6666666 55543 455555566 6666666666 333 222222 45666666666666 55555555555555555
Q ss_pred cC
Q 006886 215 VG 216 (627)
Q Consensus 215 ~~ 216 (627)
++
T Consensus 252 L~ 253 (336)
T 2ast_B 252 LS 253 (336)
T ss_dssp EE
T ss_pred ee
Confidence 43
No 380
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.32 E-value=1.4e-12 Score=134.64 Aligned_cols=98 Identities=20% Similarity=0.209 Sum_probs=76.6
Q ss_pred CCC-CcccccCccccCCCCcccEEEccC-cccCccCCCCCCCcccccEEeeecccccccCchhhc-c-cccccccccccc
Q 006886 77 PGI-GFTGPIPANSIGKLDALKILSLRS-NYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-L-QLNALDLSFNAF 152 (627)
Q Consensus 77 ~~~-~l~~~~~~~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~-~L~~L~ls~N~l 152 (627)
+++ +|+ .+|. |..+++|+.|+|++ |.|++..|..|.+|++|++|+|++|+|++++|..+. + +|+.|+|++|+|
T Consensus 16 ~~~n~l~-~ip~--l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 92 (347)
T 2ifg_A 16 TRDGALD-SLHH--LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNAL 92 (347)
T ss_dssp CSSCCCT-TTTT--SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCC
T ss_pred CCCCCCC-ccCC--CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCcc
Confidence 344 676 5776 89999999999996 999987778899999999999999999988875433 3 788888888888
Q ss_pred ccCCccccccccccccccccCCcccc
Q 006886 153 TGNIPPGFQNLTRLHLLNLQNNSISG 178 (627)
Q Consensus 153 ~~~~p~~~~~l~~L~~L~l~~N~l~~ 178 (627)
++..|..|..++ |+.|+|++|+|..
T Consensus 93 ~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 93 ESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred ceeCHHHcccCC-ceEEEeeCCCccC
Confidence 854444555554 8888888887764
No 381
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.29 E-value=1.3e-13 Score=144.80 Aligned_cols=148 Identities=22% Similarity=0.307 Sum_probs=101.0
Q ss_pred CcEEEEEcCCC---CcccccCccc------cCCCCcccEEEccCcccCc----cCCCCCCCcccccEEeeecccccccCc
Q 006886 69 SRVIGIHLPGI---GFTGPIPANS------IGKLDALKILSLRSNYLNG----TLPSDITSISSLQYVYLQNNYFSGVLP 135 (627)
Q Consensus 69 ~~v~~l~l~~~---~l~~~~~~~~------l~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~~~ 135 (627)
.+++.|+|++| ++++.+|... |..+++|+.|+|++|.|++ .+|..+..+++|++|+|++|.++...+
T Consensus 60 ~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~ 139 (386)
T 2ca6_A 60 KDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAG 139 (386)
T ss_dssp TTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHH
T ss_pred CCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHH
Confidence 56778888774 4555555521 3677888888888888876 466677778888888888888765443
Q ss_pred hh-hc--------------cccccccccccccc-cCCc---cccccccccccccccCCccc--c---cCC-CC-CCCccc
Q 006886 136 AF-RS--------------LQLNALDLSFNAFT-GNIP---PGFQNLTRLHLLNLQNNSIS--G---AIP-PL-NLPRLK 189 (627)
Q Consensus 136 ~~-~~--------------~~L~~L~ls~N~l~-~~~p---~~~~~l~~L~~L~l~~N~l~--~---~~p-~~-~~~~L~ 189 (627)
.. .. .+|+.|+|++|+++ +.+| ..+..+++|+.|+|++|+|+ | ..| .. .+++|+
T Consensus 140 ~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~ 219 (386)
T 2ca6_A 140 AKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELK 219 (386)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCC
T ss_pred HHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCcc
Confidence 21 11 36888888888876 3455 35667778888888888877 2 233 22 677888
Q ss_pred eeeccCCCcc----ccCCCCCCCCCCCcccC
Q 006886 190 ILNFSNNNLN----GSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 190 ~L~l~~N~l~----~~~p~~~~~~~~l~~~~ 216 (627)
.|+|++|.++ +.+|..+..+++|+.++
T Consensus 220 ~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~ 250 (386)
T 2ca6_A 220 VLDLQDNTFTHLGSSALAIALKSWPNLRELG 250 (386)
T ss_dssp EEECCSSCCHHHHHHHHHHHGGGCTTCCEEE
T ss_pred EEECcCCCCCcHHHHHHHHHHccCCCcCEEE
Confidence 8888888875 56676677777766654
No 382
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.28 E-value=5.1e-12 Score=139.87 Aligned_cols=134 Identities=25% Similarity=0.310 Sum_probs=71.9
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCC---CCCc--------------ccccEEeeeccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSD---ITSI--------------SSLQYVYLQNNYFS 131 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~---~~~l--------------~~L~~L~l~~N~l~ 131 (627)
..++.|+|++|+++ .+|. . +++|+.|+|++|.|++ +|.. +..| ++|+.|+|++|+|+
T Consensus 121 ~~L~~L~L~~N~l~-~lp~-~---l~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~ 194 (622)
T 3g06_A 121 SGLCKLWIFGNQLT-SLPV-L---PPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLA 194 (622)
T ss_dssp TTCCEEECCSSCCS-CCCC-C---CTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCS
T ss_pred CCcCEEECCCCCCC-cCCC-C---CCCCCEEECcCCcCCC-cCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCC
Confidence 34556666666665 2444 1 3666677777776663 3322 2222 67777777777777
Q ss_pred ccCchhh------------------ccccccccccccccccCCccccccccccccccccCCcccccCCCCCCCccceeec
Q 006886 132 GVLPAFR------------------SLQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGAIPPLNLPRLKILNF 193 (627)
Q Consensus 132 ~~~~~~~------------------~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~l 193 (627)
++++... ..+|+.|+|++|+|++ +| ..+++|+.|+|++|+|++ +|. .+++|+.|+|
T Consensus 195 ~l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~-~~~~L~~L~L 268 (622)
T 3g06_A 195 SLPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM-LPSGLLSLSV 268 (622)
T ss_dssp CCCCCCTTCCEEECCSSCCSSCCCCCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC-CCTTCCEEEC
T ss_pred CCCCccchhhEEECcCCcccccCCCCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc-ccccCcEEeC
Confidence 6543210 0235555555555553 44 233455555555555553 333 4555666666
Q ss_pred cCCCccccCCCCCCCCCCCccc
Q 006886 194 SNNNLNGSIPDSLQTFPNSSFV 215 (627)
Q Consensus 194 ~~N~l~~~~p~~~~~~~~l~~~ 215 (627)
++|+|+ .+|..+.++++|..+
T Consensus 269 s~N~L~-~lp~~l~~l~~L~~L 289 (622)
T 3g06_A 269 YRNQLT-RLPESLIHLSSETTV 289 (622)
T ss_dssp CSSCCC-SCCGGGGGSCTTCEE
T ss_pred CCCCCC-cCCHHHhhccccCEE
Confidence 666665 555555555555544
No 383
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.28 E-value=6.1e-14 Score=132.70 Aligned_cols=124 Identities=21% Similarity=0.280 Sum_probs=106.7
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhc-cccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS-LQLNALDL 147 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~L~l 147 (627)
.+++.|+|++|++++ +| .+.++++|+.|+|++|.|+ .+|..+..+++|++|+|++|++++++ .+.. .+|+.|+|
T Consensus 48 ~~L~~L~ls~n~l~~-l~--~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~l~-~~~~l~~L~~L~l 122 (198)
T 1ds9_A 48 KACKHLALSTNNIEK-IS--SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIASLS-GIEKLVNLRVLYM 122 (198)
T ss_dssp TTCSEEECSEEEESC-CC--CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCCHH-HHHHHHHSSEEEE
T ss_pred CCCCEEECCCCCCcc-cc--ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCcCC-ccccCCCCCEEEC
Confidence 579999999999996 76 6899999999999999999 78888888899999999999999964 4444 48999999
Q ss_pred cccccccCCc-cccccccccccccccCCcccccCCC-----------C-CCCccceeeccCCCcc
Q 006886 148 SFNAFTGNIP-PGFQNLTRLHLLNLQNNSISGAIPP-----------L-NLPRLKILNFSNNNLN 199 (627)
Q Consensus 148 s~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~-----------~-~~~~L~~L~l~~N~l~ 199 (627)
++|+|++..+ ..+..+++|++|++++|.+++.+|. . .+++|+.|| +|.++
T Consensus 123 ~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 123 SNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp SEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 9999995322 4789999999999999999987664 2 688999887 77776
No 384
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.25 E-value=4.1e-13 Score=138.01 Aligned_cols=147 Identities=18% Similarity=0.197 Sum_probs=117.7
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCc-ccCcc-CCCCCCCcccccEEeeecc-ccccc-Cch-hhc-c-c
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSN-YLNGT-LPSDITSISSLQYVYLQNN-YFSGV-LPA-FRS-L-Q 141 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~l~~N-~l~~~-~~~-~~~-~-~ 141 (627)
.+++.|+|++|++++..+. .++.+++|+.|+|++| .+++. +|..+..+++|++|+|++| .+++. ++. +.. . +
T Consensus 118 ~~L~~L~L~~~~l~~~~~~-~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~ 196 (336)
T 2ast_B 118 SKLQNLSLEGLRLSDPIVN-TLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSET 196 (336)
T ss_dssp CCCSEEECTTCBCCHHHHH-HHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTT
T ss_pred CCCCEEeCcCcccCHHHHH-HHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccC
Confidence 6799999999999988877 7999999999999999 78863 6777889999999999999 99864 343 222 4 8
Q ss_pred ccccccccc--ccc-cCCccccccccccccccccCCc-ccccCCCC--CCCccceeeccCCC-ccccCCCCCCCCCCCcc
Q 006886 142 LNALDLSFN--AFT-GNIPPGFQNLTRLHLLNLQNNS-ISGAIPPL--NLPRLKILNFSNNN-LNGSIPDSLQTFPNSSF 214 (627)
Q Consensus 142 L~~L~ls~N--~l~-~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~--~~~~L~~L~l~~N~-l~~~~p~~~~~~~~l~~ 214 (627)
|+.|+|++| .++ +.+|..+.++++|+.|++++|. +++..+.. .+++|+.|++++|. ++......+.++++|+.
T Consensus 197 L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~ 276 (336)
T 2ast_B 197 ITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKT 276 (336)
T ss_dssp CCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCE
T ss_pred CCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCE
Confidence 999999999 555 4678888999999999999999 66544433 78999999999996 32221125677777777
Q ss_pred cC
Q 006886 215 VG 216 (627)
Q Consensus 215 ~~ 216 (627)
++
T Consensus 277 L~ 278 (336)
T 2ast_B 277 LQ 278 (336)
T ss_dssp EE
T ss_pred Ee
Confidence 65
No 385
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.24 E-value=4.9e-13 Score=139.03 Aligned_cols=135 Identities=19% Similarity=0.299 Sum_probs=85.9
Q ss_pred CcEEEEEcCCCCcccccCc---cccCCCC-cccEEEccCcccCccCCCCCCCc-----ccccEEeeecccccccCch---
Q 006886 69 SRVIGIHLPGIGFTGPIPA---NSIGKLD-ALKILSLRSNYLNGTLPSDITSI-----SSLQYVYLQNNYFSGVLPA--- 136 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~---~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~~~--- 136 (627)
..++.|+|++|++++.-+. ..|..++ +|+.|+|++|.|++..+..|..+ ++|++|+|++|++++..+.
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 4477777777777643330 2566677 77777777777776666666654 7777777777777766653
Q ss_pred --hhc--cccccccccccccccCCcccccc-----ccccccccccCCcccccCCC----C--CCC-ccceeeccCCCccc
Q 006886 137 --FRS--LQLNALDLSFNAFTGNIPPGFQN-----LTRLHLLNLQNNSISGAIPP----L--NLP-RLKILNFSNNNLNG 200 (627)
Q Consensus 137 --~~~--~~L~~L~ls~N~l~~~~p~~~~~-----l~~L~~L~l~~N~l~~~~p~----~--~~~-~L~~L~l~~N~l~~ 200 (627)
+.. .+|+.|+|++|.|++..+..+.. .++|++|+|++|+|++.... . .++ +|+.|+|++|++++
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~ 181 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLAS 181 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCch
Confidence 111 36777777777777655544433 24777777777777742221 1 333 77777777777765
Q ss_pred cCC
Q 006886 201 SIP 203 (627)
Q Consensus 201 ~~p 203 (627)
..+
T Consensus 182 ~~~ 184 (362)
T 3goz_A 182 KNC 184 (362)
T ss_dssp SCH
T ss_pred hhH
Confidence 544
No 386
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.22 E-value=1.2e-11 Score=127.72 Aligned_cols=102 Identities=23% Similarity=0.208 Sum_probs=88.4
Q ss_pred EEEccCc-ccCccCCCCCCCcccccEEeeec-ccccccCchhh-cc-ccccccccccccccCCccccccccccccccccC
Q 006886 98 ILSLRSN-YLNGTLPSDITSISSLQYVYLQN-NYFSGVLPAFR-SL-QLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQN 173 (627)
Q Consensus 98 ~L~L~~N-~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~~~~~-~~-~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~ 173 (627)
.+++++| +|+ .+|. |..+++|++|+|++ |+|+++++..+ .+ +|+.|+|++|+|++..|..|.+|++|+.|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4688888 898 6888 99999999999996 99999998644 43 899999999999998888999999999999999
Q ss_pred CcccccCCCC-CCCccceeeccCCCcccc
Q 006886 174 NSISGAIPPL-NLPRLKILNFSNNNLNGS 201 (627)
Q Consensus 174 N~l~~~~p~~-~~~~L~~L~l~~N~l~~~ 201 (627)
|+|++.++.. ....|+.|+|++|+|...
T Consensus 90 N~l~~~~~~~~~~~~L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 90 NALESLSWKTVQGLSLQELVLSGNPLHCS 118 (347)
T ss_dssp SCCSCCCSTTTCSCCCCEEECCSSCCCCC
T ss_pred CccceeCHHHcccCCceEEEeeCCCccCC
Confidence 9999766554 333499999999999853
No 387
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.22 E-value=1.7e-13 Score=143.80 Aligned_cols=147 Identities=20% Similarity=0.316 Sum_probs=98.6
Q ss_pred CcEEEEEcCCCCccc----ccCccccCCCCcccEEEccCcccCccCCCCCC----Cc---------ccccEEeeeccccc
Q 006886 69 SRVIGIHLPGIGFTG----PIPANSIGKLDALKILSLRSNYLNGTLPSDIT----SI---------SSLQYVYLQNNYFS 131 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~----~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~----~l---------~~L~~L~l~~N~l~ 131 (627)
.+++.|+|++|.+++ .+|. .+..+++|+.|+|++|.|++..+..+. .+ ++|++|+|++|+++
T Consensus 94 ~~L~~L~Ls~n~l~~~~~~~l~~-~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~ 172 (386)
T 2ca6_A 94 PKLHTVRLSDNAFGPTAQEPLID-FLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLE 172 (386)
T ss_dssp TTCCEEECCSCCCCTTTHHHHHH-HHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCT
T ss_pred CcccEEECCCCcCCHHHHHHHHH-HHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCC
Confidence 578888888888886 3555 677888888888888888644333333 33 78888888888886
Q ss_pred -ccCch----hhc-cccccccccccccc--c---CCccccccccccccccccCCccc----ccCCCC--CCCccceeecc
Q 006886 132 -GVLPA----FRS-LQLNALDLSFNAFT--G---NIPPGFQNLTRLHLLNLQNNSIS----GAIPPL--NLPRLKILNFS 194 (627)
Q Consensus 132 -~~~~~----~~~-~~L~~L~ls~N~l~--~---~~p~~~~~l~~L~~L~l~~N~l~----~~~p~~--~~~~L~~L~l~ 194 (627)
+..+. +.. .+|+.|+|++|+|+ | .+|..+..+++|+.|+|++|+|+ +.+|.. .+++|+.|+|+
T Consensus 173 ~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~ 252 (386)
T 2ca6_A 173 NGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLN 252 (386)
T ss_dssp GGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECT
T ss_pred cHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECC
Confidence 33442 112 26888888888877 3 34446777888888888888875 344432 67778888888
Q ss_pred CCCcccc----CCCCC--CCCCCCcccC
Q 006886 195 NNNLNGS----IPDSL--QTFPNSSFVG 216 (627)
Q Consensus 195 ~N~l~~~----~p~~~--~~~~~l~~~~ 216 (627)
+|.+++. +|..+ +.+++|..++
T Consensus 253 ~n~i~~~~~~~l~~~l~~~~~~~L~~L~ 280 (386)
T 2ca6_A 253 DCLLSARGAAAVVDAFSKLENIGLQTLR 280 (386)
T ss_dssp TCCCCHHHHHHHHHHHHTCSSCCCCEEE
T ss_pred CCCCchhhHHHHHHHHhhccCCCeEEEE
Confidence 8887754 45544 2255555543
No 388
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.20 E-value=7.3e-11 Score=116.62 Aligned_cols=136 Identities=18% Similarity=0.093 Sum_probs=106.3
Q ss_pred cccCcCCceeEEEEEecCCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCCHH
Q 006886 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 418 (627)
..++.|+.+.||++... ++.+++|+..... .....+.+|++++..+..+..+.++++++...+..++||||++|.+|.
T Consensus 20 ~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 98 (263)
T 3tm0_A 20 KDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCS 98 (263)
T ss_dssp ECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHH
T ss_pred eeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehh
Confidence 45677788899999865 6889999986532 234468899999999966778888999998888899999999999987
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------------
Q 006886 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEG------------------------------------------- 455 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------------- 455 (627)
+.+.. ......++.++++++..||+..
T Consensus 99 ~~~~~----------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (263)
T 3tm0_A 99 EEYED----------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPR 168 (263)
T ss_dssp HHCCT----------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHH
T ss_pred hccCC----------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHH
Confidence 76321 1123467889999999999811
Q ss_pred -------------CCCeeecCCCCCCeEecCCCCeEEeeccccc
Q 006886 456 -------------GAKFTHGNIKSSNVLLTQDLNGCISDVGLAH 486 (627)
Q Consensus 456 -------------~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~ 486 (627)
.+.++|+|+++.||+++++..+.|+||+.+.
T Consensus 169 ~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 169 ELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1348999999999999876666799999764
No 389
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.17 E-value=3.9e-12 Score=132.22 Aligned_cols=128 Identities=17% Similarity=0.129 Sum_probs=106.2
Q ss_pred EEEcCCCCcccccCccccCCCCcccEEEccCcccCccCC----CCCCCcc-cccEEeeecccccccCch-hhc------c
Q 006886 73 GIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLP----SDITSIS-SLQYVYLQNNYFSGVLPA-FRS------L 140 (627)
Q Consensus 73 ~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~l~~N~l~~~~~~-~~~------~ 140 (627)
..+|++|+++|.+|. .+...++|+.|+|++|.|++..+ ..|..++ +|++|+|++|++++..+. +.. .
T Consensus 2 ~~~ls~n~~~~~~~~-~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 80 (362)
T 3goz_A 2 NYKLTLHPGSNPVEE-FTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPA 80 (362)
T ss_dssp EEECCCCTTCCHHHH-HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCT
T ss_pred ccccccccchHHHHH-HHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCC
Confidence 367899999999887 77778889999999999997666 6777888 999999999999998664 332 5
Q ss_pred ccccccccccccccCCccccccc-----cccccccccCCcccccCCCC------C-CCccceeeccCCCcccc
Q 006886 141 QLNALDLSFNAFTGNIPPGFQNL-----TRLHLLNLQNNSISGAIPPL------N-LPRLKILNFSNNNLNGS 201 (627)
Q Consensus 141 ~L~~L~ls~N~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~p~~------~-~~~L~~L~l~~N~l~~~ 201 (627)
+|+.|+|++|.+++..+..+... ++|++|+|++|+|++..+.. . .++|++|+|++|.++..
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~ 153 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIK 153 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGS
T ss_pred CccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHH
Confidence 79999999999998777755554 89999999999998755432 2 36999999999999853
No 390
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.06 E-value=2.5e-10 Score=117.90 Aligned_cols=148 Identities=15% Similarity=0.061 Sum_probs=117.4
Q ss_pred EEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeec-ccccccCchh-hc--ccccccc
Q 006886 71 VIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQN-NYFSGVLPAF-RS--LQLNALD 146 (627)
Q Consensus 71 v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~~~~-~~--~~L~~L~ 146 (627)
...+.+.+|+++ .++++.|..+++|+.|++++|.|++..+..+....++..|++.+ |++..+++.. .. ..++.|+
T Consensus 82 ~~~l~~~~N~l~-~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~ 160 (350)
T 4ay9_X 82 HEIRIEKANNLL-YINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILW 160 (350)
T ss_dssp CEEEEEEETTCC-EECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEE
T ss_pred hhhhcccCCccc-ccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhc
Confidence 345777889998 45555899999999999999999977777778888999999976 6777776643 33 2689999
Q ss_pred ccccccccCCccccccccccccccccC-CcccccCCC-C--CCCccceeeccCCCccccCCCCCCCCCCCcccCCCcCC
Q 006886 147 LSFNAFTGNIPPGFQNLTRLHLLNLQN-NSISGAIPP-L--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVGNSMLC 221 (627)
Q Consensus 147 ls~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~p~-~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~n~~~~ 221 (627)
|++|+|+ .+|......++|+.|++++ |+++ .+|. . .+++|+.|+|++|+|+...+..+.+++.|..+++..+.
T Consensus 161 L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~-~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~~~l~ 237 (350)
T 4ay9_X 161 LNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLK 237 (350)
T ss_dssp CCSSCCC-EECTTSSTTEEEEEEECTTCTTCC-CCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTCTTCC
T ss_pred ccccccc-CCChhhccccchhHHhhccCCccc-CCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccCCCcC
Confidence 9999999 5777666778999999986 5665 5554 2 89999999999999995555678889988888765543
No 391
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.06 E-value=3.4e-12 Score=137.07 Aligned_cols=148 Identities=15% Similarity=0.094 Sum_probs=114.7
Q ss_pred CcEEEEEcCCCCcccc----cCccccCCCCcccEEEccCcccCcc----CCCCCCCcccccEEeeecccccccCchh-hc
Q 006886 69 SRVIGIHLPGIGFTGP----IPANSIGKLDALKILSLRSNYLNGT----LPSDITSISSLQYVYLQNNYFSGVLPAF-RS 139 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~----~~~~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~ 139 (627)
.+++.|+|++|.+++. +.+..+..+++|+.|+|++|.+++. ++..+..+++|++|+|++|.+++..+.. ..
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 6799999999998754 2232445789999999999999864 6777788999999999999997654432 11
Q ss_pred ------cccccccccccccccC----CccccccccccccccccCCcccccCCCC-------CCCccceeeccCCCccc--
Q 006886 140 ------LQLNALDLSFNAFTGN----IPPGFQNLTRLHLLNLQNNSISGAIPPL-------NLPRLKILNFSNNNLNG-- 200 (627)
Q Consensus 140 ------~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p~~-------~~~~L~~L~l~~N~l~~-- 200 (627)
.+|+.|+|++|.+++. +|..+..+++|+.|++++|++++..+.. ..++|+.|++++|.+++
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~ 386 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSS 386 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHH
T ss_pred HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhh
Confidence 3799999999999865 5667788899999999999998643321 26789999999999986
Q ss_pred --cCCCCCCCCCCCcccC
Q 006886 201 --SIPDSLQTFPNSSFVG 216 (627)
Q Consensus 201 --~~p~~~~~~~~l~~~~ 216 (627)
.+|..+..+++|+.++
T Consensus 387 ~~~l~~~l~~~~~L~~L~ 404 (461)
T 1z7x_W 387 CSSLAATLLANHSLRELD 404 (461)
T ss_dssp HHHHHHHHHHCCCCCEEE
T ss_pred HHHHHHHHHhCCCccEEE
Confidence 6777777777776654
No 392
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.06 E-value=2.3e-12 Score=138.47 Aligned_cols=135 Identities=21% Similarity=0.200 Sum_probs=104.1
Q ss_pred CcEEEEEcCCCCcccc----cCccccCCCCcccEEEccCcccCccC-----CCCCCCcccccEEeeeccccccc----Cc
Q 006886 69 SRVIGIHLPGIGFTGP----IPANSIGKLDALKILSLRSNYLNGTL-----PSDITSISSLQYVYLQNNYFSGV----LP 135 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~----~~~~~l~~l~~L~~L~L~~N~l~~~~-----p~~~~~l~~L~~L~l~~N~l~~~----~~ 135 (627)
.+++.|+|++|++++. ++. .+..+++|+.|+|++|.+++.. +..+..+++|++|+|++|+++.. ++
T Consensus 199 ~~L~~L~L~~n~l~~~~~~~l~~-~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~ 277 (461)
T 1z7x_W 199 CQLEALKLESCGVTSDNCRDLCG-IVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLC 277 (461)
T ss_dssp CCCCEEECTTSCCBTTHHHHHHH-HHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHH
T ss_pred CCceEEEccCCCCcHHHHHHHHH-HHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHH
Confidence 4799999999999863 555 6788999999999999987532 22334689999999999999874 23
Q ss_pred -hhhc-cccccccccccccccCCccccccc-----cccccccccCCcccccC----CCC--CCCccceeeccCCCccccC
Q 006886 136 -AFRS-LQLNALDLSFNAFTGNIPPGFQNL-----TRLHLLNLQNNSISGAI----PPL--NLPRLKILNFSNNNLNGSI 202 (627)
Q Consensus 136 -~~~~-~~L~~L~ls~N~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~----p~~--~~~~L~~L~l~~N~l~~~~ 202 (627)
.+.. .+|+.|+|++|.+++..+..+... ++|+.|++++|++++.. +.. .+++|+.|++++|.+++..
T Consensus 278 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~ 357 (461)
T 1z7x_W 278 RVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAG 357 (461)
T ss_dssp HHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHH
T ss_pred HHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcccccc
Confidence 2322 479999999999986555555443 69999999999998652 222 6789999999999998654
Q ss_pred CC
Q 006886 203 PD 204 (627)
Q Consensus 203 p~ 204 (627)
+.
T Consensus 358 ~~ 359 (461)
T 1z7x_W 358 VR 359 (461)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 393
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.05 E-value=3.4e-10 Score=111.45 Aligned_cols=132 Identities=12% Similarity=0.104 Sum_probs=96.8
Q ss_pred ccC-cCCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCC-eeeeeeEEeeCCceEEEEecCCCCCHH
Q 006886 341 VLG-KGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSN-VVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 341 ~lg-~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~n-iv~l~~~~~~~~~~~lv~e~~~~g~L~ 418 (627)
.++ .|..+.||++...+|+.+++|..... ....+..|+++++.+..+.- +.+++++....+..++||||++|.++.
T Consensus 26 ~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~ 103 (264)
T 1nd4_A 26 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL 103 (264)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred ecccCCCCceEEEEecCCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC
Confidence 344 45569999998777888999987543 23457889999999855522 455788877777889999999998874
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------------
Q 006886 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEG------------------------------------------- 455 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------------- 455 (627)
... .+ ...++.++++.+..||+..
T Consensus 104 --~~~--------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (264)
T 1nd4_A 104 --SSH--------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAEL 170 (264)
T ss_dssp --TSC--------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHH
T ss_pred --cCc--------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHH
Confidence 211 11 2256677777788887642
Q ss_pred ------------CCCeeecCCCCCCeEecCCCCeEEeecccccc
Q 006886 456 ------------GAKFTHGNIKSSNVLLTQDLNGCISDVGLAHL 487 (627)
Q Consensus 456 ------------~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~ 487 (627)
...++|+|++|.||++++++.+.|+|||.+..
T Consensus 171 ~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 171 FARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11299999999999998876677999998653
No 394
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.98 E-value=1.8e-09 Score=111.80 Aligned_cols=141 Identities=17% Similarity=0.215 Sum_probs=104.7
Q ss_pred cccCcCCceeEEEEEecCCcEEEEEEec--ccc--cCHHHHHHHHHHHHHhcc-CCCeeeeeeEEeeC---CceEEEEec
Q 006886 340 EVLGKGSYGSTYKAILEDGTTVVVKRLR--EVA--ATKREFEQQMEVVGTIGK-HSNVVPVRAYYYSK---DEKLVVYSY 411 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~l~--~~~--~~~~~~~~e~~~l~~l~~-h~niv~l~~~~~~~---~~~~lv~e~ 411 (627)
+.++.|.++.||+.... +..+++|+.. ... .....+.+|.+++..+.. +..+.+++.++.+. +..++||||
T Consensus 44 ~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 56889999999999876 4678888876 332 234578889999999843 34577888887765 347899999
Q ss_pred CCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 006886 412 MPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEG------------------------------------ 455 (627)
Q Consensus 412 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------ 455 (627)
++|..+.+.. ...++...+..++.++++.|..||+..
T Consensus 123 v~G~~l~~~~-------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 123 VSGRVLWDQS-------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp CCCBCCCCTT-------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred cCCeecCCCc-------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 9987764311 123677888899999999999999831
Q ss_pred -------------------CCCeeecCCCCCCeEecCCCC--eEEeeccccccc
Q 006886 456 -------------------GAKFTHGNIKSSNVLLTQDLN--GCISDVGLAHLI 488 (627)
Q Consensus 456 -------------------~~~ivH~Dlk~~NILl~~~~~--~ki~DfG~a~~~ 488 (627)
.+.++|+|+++.||+++.++. +.|.||+.+...
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 245999999999999998754 589999988653
No 395
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.96 E-value=3.4e-12 Score=125.08 Aligned_cols=162 Identities=18% Similarity=0.138 Sum_probs=112.7
Q ss_pred CCCCCcceEeeCCCCcEEEEEcCC---CCcccccCccccCCCCcccEEEccCcccCccCCC-CCCCcccccE--Eeeecc
Q 006886 55 VCSSWIGVTCNVNRSRVIGIHLPG---IGFTGPIPANSIGKLDALKILSLRSNYLNGTLPS-DITSISSLQY--VYLQNN 128 (627)
Q Consensus 55 ~c~~w~gv~C~~~~~~v~~l~l~~---~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~--L~l~~N 128 (627)
.| +|.|+.|+.+..+|+.+...+ ..+.+.++++.+..++. .|...+|.-++.++- .|...+.|.. ++++.|
T Consensus 77 l~-~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N 153 (267)
T 3rw6_A 77 LK-AVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLN 153 (267)
T ss_dssp HH-HTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTT
T ss_pred HH-hcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCC
Confidence 45 699999987666777666655 45556666545555544 344555555544432 2666667776 788888
Q ss_pred cccccC---chhh--cccccccccccccccc--CCccccccccccccccccCCcccccCCCCCCC--ccceeeccCCCcc
Q 006886 129 YFSGVL---PAFR--SLQLNALDLSFNAFTG--NIPPGFQNLTRLHLLNLQNNSISGAIPPLNLP--RLKILNFSNNNLN 199 (627)
Q Consensus 129 ~l~~~~---~~~~--~~~L~~L~ls~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~--~L~~L~l~~N~l~ 199 (627)
+..... +... ..+|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++.-.-..+. +|++|+|++|+++
T Consensus 154 ~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l~L~~L~L~~Npl~ 233 (267)
T 3rw6_A 154 RRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLC 233 (267)
T ss_dssp SHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTSCCSEEECTTSTTG
T ss_pred HHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccCCcceEEccCCcCc
Confidence 644332 2111 1379999999999997 45677889999999999999999752222333 9999999999999
Q ss_pred ccCCC-------CCCCCCCCcccCCCc
Q 006886 200 GSIPD-------SLQTFPNSSFVGNSM 219 (627)
Q Consensus 200 ~~~p~-------~~~~~~~l~~~~n~~ 219 (627)
+.+|+ .+..+++|..++...
T Consensus 234 ~~~~~~~~y~~~il~~~P~L~~LDg~~ 260 (267)
T 3rw6_A 234 DTFRDQSTYISAIRERFPKLLRLDGHE 260 (267)
T ss_dssp GGCSSHHHHHHHHHHHCTTCCEESSCB
T ss_pred cccCcchhHHHHHHHHCcccCeECCcC
Confidence 88874 367889998887543
No 396
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.90 E-value=9.2e-10 Score=111.24 Aligned_cols=183 Identities=16% Similarity=0.139 Sum_probs=118.7
Q ss_pred cccCcCCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCe--eeeeeEEeeCC---ceEEEEecCCC
Q 006886 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNV--VPVRAYYYSKD---EKLVVYSYMPA 414 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~ni--v~l~~~~~~~~---~~~lv~e~~~~ 414 (627)
+.++.|....||+.. ..+++|+-... .....+.+|.+++..+..+..+ ..++......+ ..++||++++|
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G 100 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKG 100 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCC
Confidence 458889999999853 45888875432 2346788999999888544433 33343332222 24789999999
Q ss_pred CCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 006886 415 GSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEG--------------------------------------- 455 (627)
Q Consensus 415 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~--------------------------------------- 455 (627)
.++...... .++..++..++.++++.+..||+..
T Consensus 101 ~~l~~~~~~-------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 173 (304)
T 3sg8_A 101 VPLTPLLLN-------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV 173 (304)
T ss_dssp EECCHHHHH-------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred eECCccccc-------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence 887653321 2566777788888888888888611
Q ss_pred ----------------CCCeeecCCCCCCeEecC--CCCeEEeecccccccCCCCCCCCCccc---cCccccC------C
Q 006886 456 ----------------GAKFTHGNIKSSNVLLTQ--DLNGCISDVGLAHLINFPTTATRTIGY---RAPEVTE------T 508 (627)
Q Consensus 456 ----------------~~~ivH~Dlk~~NILl~~--~~~~ki~DfG~a~~~~~~~~~~~t~~y---~aPE~~~------~ 508 (627)
.+.++|+|++|.||++++ +..+.|+||+.+..............+ ..|+... +
T Consensus 174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~ 253 (304)
T 3sg8_A 174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYK 253 (304)
T ss_dssp HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHT
T ss_pred HHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcC
Confidence 135899999999999998 456789999988654321100000000 1121110 0
Q ss_pred --------CCCCCcchhHHHHHHHHHHHhCCCCC
Q 006886 509 --------RKASQKSDVYSFGVLLLEMLTGKAPL 534 (627)
Q Consensus 509 --------~~~~~~~Dv~S~Gvvl~el~tg~~p~ 534 (627)
.+.....+.|+++.++|.+.+|..+|
T Consensus 254 ~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 254 HKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 01122368999999999999998765
No 397
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.86 E-value=3.5e-09 Score=108.22 Aligned_cols=144 Identities=18% Similarity=0.150 Sum_probs=94.7
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccc----ccc-----------
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYF----SGV----------- 133 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l----~~~----------- 133 (627)
..++.|+|++ +++ .|+...|.++++|+.|+|++|.++...+..|..+.++.++.++.+.. ..+
T Consensus 101 ~~L~~l~L~~-~i~-~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 101 QTLEKVILSE-KIK-NIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp TTCCC-CBCT-TCC-EECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred CCCcEEECCc-ccc-chhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 5688899988 777 67777899999999999999988766666676666666665544211 000
Q ss_pred -----------Cch----------------------------h--hccccccccccccccccCCcccccccccccccccc
Q 006886 134 -----------LPA----------------------------F--RSLQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQ 172 (627)
Q Consensus 134 -----------~~~----------------------------~--~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~ 172 (627)
++. + ...+|+.|+|++|+++...+..|.+|++|+.|+|.
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~ 258 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLP 258 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECC
Confidence 000 0 01367778888877775444567778888888887
Q ss_pred CCcccccCCCC--CCCccc-eeeccCCCccccCCCCCCCCCCCcccC
Q 006886 173 NNSISGAIPPL--NLPRLK-ILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 173 ~N~l~~~~p~~--~~~~L~-~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
+| ++...+.. ++++|+ .|++.+ .++..-+..|.++++|+.+.
T Consensus 259 ~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~ 303 (329)
T 3sb4_A 259 HN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVL 303 (329)
T ss_dssp TT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEE
T ss_pred cc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEE
Confidence 77 55322222 677777 777777 66644556777777776653
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.86 E-value=8.8e-11 Score=122.06 Aligned_cols=106 Identities=21% Similarity=0.129 Sum_probs=48.0
Q ss_pred CcccEEEccCcccCccCCCCC-CCcccccEEeeecccccccCchhh-------cccccccccccccccc----CCccccc
Q 006886 94 DALKILSLRSNYLNGTLPSDI-TSISSLQYVYLQNNYFSGVLPAFR-------SLQLNALDLSFNAFTG----NIPPGFQ 161 (627)
Q Consensus 94 ~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~~~~~-------~~~L~~L~ls~N~l~~----~~p~~~~ 161 (627)
++|+.|+|++|.|+..-...+ ..+++|++|+|++|+|+....... ..+|+.|+|++|.|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 455555555555543222222 234455555555555543322110 1245555555555542 1223334
Q ss_pred cccccccccccCCcccccC----CC--CCCCccceeeccCCCcc
Q 006886 162 NLTRLHLLNLQNNSISGAI----PP--LNLPRLKILNFSNNNLN 199 (627)
Q Consensus 162 ~l~~L~~L~l~~N~l~~~~----p~--~~~~~L~~L~l~~N~l~ 199 (627)
.+++|++|+|++|+|+..- +. ...++|+.|+|++|.|+
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~ 224 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAG 224 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCC
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCC
Confidence 4555555555555554311 10 12345555555555554
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.79 E-value=3.8e-11 Score=124.79 Aligned_cols=133 Identities=16% Similarity=0.178 Sum_probs=100.4
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCC-----CCcccccEEeeecccccccCch-----hh
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDI-----TSISSLQYVYLQNNYFSGVLPA-----FR 138 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~l~~N~l~~~~~~-----~~ 138 (627)
..++.|+|++|+++..-.......+++|+.|+|++|.|+..-...+ ...++|++|+|++|.|+..... +.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 5899999999999754333234457789999999999975443344 2458899999999999763221 12
Q ss_pred -ccccccccccccccccC----CccccccccccccccccCCcccccCC----CC--CCCccceeeccCCCcccc
Q 006886 139 -SLQLNALDLSFNAFTGN----IPPGFQNLTRLHLLNLQNNSISGAIP----PL--NLPRLKILNFSNNNLNGS 201 (627)
Q Consensus 139 -~~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p----~~--~~~~L~~L~l~~N~l~~~ 201 (627)
..+|++|+|++|.|+.. ++..+...++|+.|+|++|+|+..-. .. ..++|++|+|++|.|+..
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 23799999999999852 35667788899999999999985321 11 568899999999999743
No 400
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.75 E-value=4.8e-09 Score=107.22 Aligned_cols=146 Identities=10% Similarity=0.103 Sum_probs=104.9
Q ss_pred CcEEEEEcCCCCcc----------c---------ccCccccCC--------CCcccEEEccCcccCccCCCCCCCccccc
Q 006886 69 SRVIGIHLPGIGFT----------G---------PIPANSIGK--------LDALKILSLRSNYLNGTLPSDITSISSLQ 121 (627)
Q Consensus 69 ~~v~~l~l~~~~l~----------~---------~~~~~~l~~--------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 121 (627)
.+++.|||++|++. . .||...|.+ +++|+.|+|.+ .++.+-+..|.++++|+
T Consensus 49 ~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~ 127 (329)
T 3sb4_A 49 PSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLK 127 (329)
T ss_dssp TTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCC
T ss_pred ccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccc
Confidence 46777777777766 0 467777888 99999999999 88866677899999999
Q ss_pred EEeeecccccccCchhhcc--cccccccccccc----c----------------------cCCccc--------------
Q 006886 122 YVYLQNNYFSGVLPAFRSL--QLNALDLSFNAF----T----------------------GNIPPG-------------- 159 (627)
Q Consensus 122 ~L~l~~N~l~~~~~~~~~~--~L~~L~ls~N~l----~----------------------~~~p~~-------------- 159 (627)
+|+|++|.+..+.+..+.. ++..+.++.+.. . +.+|..
T Consensus 128 ~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l 207 (329)
T 3sb4_A 128 ICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFL 207 (329)
T ss_dssp EEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEE
T ss_pred eEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccccceE
Confidence 9999999998777754432 344444433211 0 001110
Q ss_pred -------------c-ccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCCCCCCCCCCCc-ccC
Q 006886 160 -------------F-QNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSS-FVG 216 (627)
Q Consensus 160 -------------~-~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~-~~~ 216 (627)
+ ..+++|+.|+|++|+++...+.. ++++|+.|+|.+| ++..-+..|.++++|+ .+.
T Consensus 208 ~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~ 280 (329)
T 3sb4_A 208 TIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLE 280 (329)
T ss_dssp EEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEE
T ss_pred EEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEE
Confidence 0 13789999999999998544433 8999999999998 7755567899999887 554
No 401
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.50 E-value=3.6e-09 Score=117.23 Aligned_cols=35 Identities=11% Similarity=0.112 Sum_probs=17.4
Q ss_pred CCCcccEEEccCcccCccCCCCCCC-cccccEEeee
Q 006886 92 KLDALKILSLRSNYLNGTLPSDITS-ISSLQYVYLQ 126 (627)
Q Consensus 92 ~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~l~ 126 (627)
.+++|+.|+|+.|.+++..+..+.. +++|+.|+|+
T Consensus 376 ~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~ 411 (592)
T 3ogk_B 376 GCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLV 411 (592)
T ss_dssp HCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEE
T ss_pred hCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEe
Confidence 3555555555555555444444433 4555555553
No 402
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.46 E-value=9.7e-09 Score=113.76 Aligned_cols=142 Identities=12% Similarity=0.040 Sum_probs=91.3
Q ss_pred cEEEEEcCCCC-ccc-ccCccccCCCCcccEEEccCcccCcc----CCCCCCCcccccEEeeecccccccCc----hhhc
Q 006886 70 RVIGIHLPGIG-FTG-PIPANSIGKLDALKILSLRSNYLNGT----LPSDITSISSLQYVYLQNNYFSGVLP----AFRS 139 (627)
Q Consensus 70 ~v~~l~l~~~~-l~~-~~~~~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~~----~~~~ 139 (627)
+++.|+|++|. ++. .++. ...++++|+.|+|++|.+++. ++..+..+++|++|+|++|.+++... ....
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~-~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~ 217 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLS-IVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIAR 217 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHH-HHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHH-HHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHh
Confidence 49999999886 221 1222 345789999999999998765 33344578999999999999985433 2222
Q ss_pred --cccccccccccccccCCccccccccccccccccCCccccc---CCC--CCCCccceeeccCCCccccCCCCCCCCCCC
Q 006886 140 --LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSISGA---IPP--LNLPRLKILNFSNNNLNGSIPDSLQTFPNS 212 (627)
Q Consensus 140 --~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~---~p~--~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l 212 (627)
.+|+.|+|++|.+++ +|..+.++++|+.|+++++..... .+. ..+++|+.|+++++.. +.+|..+..+++|
T Consensus 218 ~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L 295 (592)
T 3ogk_B 218 NCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQI 295 (592)
T ss_dssp HCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGC
T ss_pred hCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhcCCC
Confidence 479999999999985 778888889999998875332211 111 1445555555555422 2344444444444
Q ss_pred cc
Q 006886 213 SF 214 (627)
Q Consensus 213 ~~ 214 (627)
+.
T Consensus 296 ~~ 297 (592)
T 3ogk_B 296 RK 297 (592)
T ss_dssp CE
T ss_pred cE
Confidence 33
No 403
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.43 E-value=7.1e-07 Score=90.60 Aligned_cols=133 Identities=14% Similarity=0.155 Sum_probs=95.0
Q ss_pred cccCcCCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHHHhcc--CCC-eeeeeeEEeeCCceEEEEecCCCCC
Q 006886 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGK--HSN-VVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~--h~n-iv~l~~~~~~~~~~~lv~e~~~~g~ 416 (627)
+.++.|....||+. ++.+++|+.... .....+..|.+++..+.. .+. +.+++++ +..++||||++|.+
T Consensus 43 ~~l~~G~~n~vy~v----g~~~vlR~~~~~-~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~~ 113 (320)
T 3r70_A 43 RYLSSGDDSDTFLC----NEQYVVKVPKRD-SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGER 113 (320)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSH-HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCBC
T ss_pred EeCCCCCCceEEEE----CCEEEEEeCCcH-HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCcc
Confidence 56889999999997 567888876432 223568899999998843 122 2333433 56789999999988
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC----------------------------------------
Q 006886 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGG---------------------------------------- 456 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~---------------------------------------- 456 (627)
+...... .++..++..++.++++.+..||+...
T Consensus 114 l~~~~~~-------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (320)
T 3r70_A 114 ITYEQYH-------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEML 186 (320)
T ss_dssp CCHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred ccccccc-------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccch
Confidence 8643221 25566667777777787877775432
Q ss_pred --------------------CCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006886 457 --------------------AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 457 --------------------~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~ 488 (627)
+.++|+|++|.||+++.+..+.|+||+.+...
T Consensus 187 ~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 187 EHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 23599999999999999766799999988654
No 404
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.38 E-value=2e-06 Score=84.83 Aligned_cols=136 Identities=15% Similarity=0.215 Sum_probs=95.9
Q ss_pred ccCcCCce-eEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCCHH
Q 006886 341 VLGKGSYG-STYKAILE-DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSLF 418 (627)
Q Consensus 341 ~lg~G~~g-~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 418 (627)
.+..|..| .||+.... ++..+++|+-... ...++.+|...+..+..+--+.++++++.+.+..++|||+++|.++.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~ 108 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAF 108 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccc
Confidence 34445554 68988754 4667889976432 34568889999998866655777888888888999999999998876
Q ss_pred HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------------
Q 006886 419 MLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEG------------------------------------------- 455 (627)
Q Consensus 419 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------------- 455 (627)
+...... .....++.+++..|.-||+..
T Consensus 109 ~~~~~~~---------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 109 QVLEEYP---------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp HHHHHCG---------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred ccccCCH---------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 6543211 122334555555555555421
Q ss_pred ------------CCCeeecCCCCCCeEecCCCCeEEeecccccc
Q 006886 456 ------------GAKFTHGNIKSSNVLLTQDLNGCISDVGLAHL 487 (627)
Q Consensus 456 ------------~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~ 487 (627)
.+.++|+|+.+.|||+++++.+-|+||+.+..
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12379999999999999877777999998753
No 405
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.37 E-value=1.9e-08 Score=93.48 Aligned_cols=111 Identities=11% Similarity=0.138 Sum_probs=68.5
Q ss_pred ccCCCCcccEEEccCc-ccCcc----CCCCCCCcccccEEeeecccccccCc----h-hhc-cccccccccccccccC--
Q 006886 89 SIGKLDALKILSLRSN-YLNGT----LPSDITSISSLQYVYLQNNYFSGVLP----A-FRS-LQLNALDLSFNAFTGN-- 155 (627)
Q Consensus 89 ~l~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~~----~-~~~-~~L~~L~ls~N~l~~~-- 155 (627)
.+...++|+.|+|++| .|... +...+...++|++|+|++|+|...-- . +.. .+|++|+|++|.|+..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 4566677777777777 66532 22334455677777777777754221 1 111 2577777777777642
Q ss_pred --Cccccccccccccccc--cCCcccccCC----CC--CCCccceeeccCCCcc
Q 006886 156 --IPPGFQNLTRLHLLNL--QNNSISGAIP----PL--NLPRLKILNFSNNNLN 199 (627)
Q Consensus 156 --~p~~~~~l~~L~~L~l--~~N~l~~~~p----~~--~~~~L~~L~l~~N~l~ 199 (627)
+...+...++|++|+| ++|.|...-. .. ..++|++|+|++|.+.
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3445666677888888 7787764211 11 4467888888888774
No 406
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.35 E-value=1.6e-07 Score=91.95 Aligned_cols=101 Identities=22% Similarity=0.226 Sum_probs=61.3
Q ss_pred cCCCCcccE--EEccCcccC---ccCCCCCCCcccccEEeeecccccccC--chhh-c-cccccccccccccccCCcccc
Q 006886 90 IGKLDALKI--LSLRSNYLN---GTLPSDITSISSLQYVYLQNNYFSGVL--PAFR-S-LQLNALDLSFNAFTGNIPPGF 160 (627)
Q Consensus 90 l~~l~~L~~--L~L~~N~l~---~~~p~~~~~l~~L~~L~l~~N~l~~~~--~~~~-~-~~L~~L~ls~N~l~~~~p~~~ 160 (627)
|...+.|.. ++++.|... +.++....++++|++|+|++|+|+++. |... . .+|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 455555555 666666332 222222245677777777777777743 2322 2 3677777777777753 334
Q ss_pred cccc--ccccccccCCcccccCCC---------CCCCccceee
Q 006886 161 QNLT--RLHLLNLQNNSISGAIPP---------LNLPRLKILN 192 (627)
Q Consensus 161 ~~l~--~L~~L~l~~N~l~~~~p~---------~~~~~L~~L~ 192 (627)
..+. +|+.|+|++|.+++.+|. ..+++|+.||
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 4444 788888888888876663 1577777765
No 407
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.34 E-value=2.9e-06 Score=85.49 Aligned_cols=137 Identities=16% Similarity=0.106 Sum_probs=89.4
Q ss_pred cccCcCCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHHHhccCC--CeeeeeeEEe-eCCceEEEEecCCCCC
Q 006886 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHS--NVVPVRAYYY-SKDEKLVVYSYMPAGS 416 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~--niv~l~~~~~-~~~~~~lv~e~~~~g~ 416 (627)
+.++.|....||+. +..+++|+-.. ......+..|.+++..+..|- .+.+++.+.. ..+..++||||++|..
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~-~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~ 99 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS-QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQI 99 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS-HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC-chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeE
Confidence 45778888899987 56688887432 223467889999999995542 2445555553 3455789999999987
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc------------------------------------------
Q 006886 417 LFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSE------------------------------------------ 454 (627)
Q Consensus 417 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~------------------------------------------ 454 (627)
+...... .++...+..++.++++.|..||+.
T Consensus 100 l~~~~~~-------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l 172 (306)
T 3tdw_A 100 LGEDGMA-------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL 172 (306)
T ss_dssp CHHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred Cchhhhh-------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence 7653211 123333344444444444444432
Q ss_pred ---------------CCCCeeecCCCCCCeEecC---CCCe-EEeeccccccc
Q 006886 455 ---------------GGAKFTHGNIKSSNVLLTQ---DLNG-CISDVGLAHLI 488 (627)
Q Consensus 455 ---------------~~~~ivH~Dlk~~NILl~~---~~~~-ki~DfG~a~~~ 488 (627)
..+.++|+|+++.||+++. ++.+ .|+||+.+...
T Consensus 173 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 173 TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 2235799999999999997 4554 79999987543
No 408
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.25 E-value=7.5e-06 Score=81.51 Aligned_cols=141 Identities=19% Similarity=0.255 Sum_probs=90.4
Q ss_pred cccCcCCceeEEEEEecCCcEEEEEEeccc-ccCHHHHHHHHHHHHHhccC--CCeeeeeeEEeeCCceEEEEecCCCCC
Q 006886 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREV-AATKREFEQQMEVVGTIGKH--SNVVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~-~~~~~~~~~e~~~l~~l~~h--~niv~l~~~~~~~~~~~lv~e~~~~g~ 416 (627)
+.|+.|.++.||++...+|+.+++|+.... ......|..|++.+..+..+ ..+.+++++. ..++||||++++.
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~ 96 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCC
Confidence 578999999999999888999999986532 22346789999999999432 2466666653 4689999999986
Q ss_pred HH--------H---HhhhcCCCC----------------CCCCCHHHHHH---H-----------------HHHHHHHHH
Q 006886 417 LF--------M---LLHRNRSDG----------------GTALDWNSRMK---I-----------------ALGTARGIA 449 (627)
Q Consensus 417 L~--------~---~l~~~~~~~----------------~~~l~~~~~~~---i-----------------~~~ia~~l~ 449 (627)
+. . .+|...... .-.-+|..... + ...+-+.+.
T Consensus 97 ~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l~~ 176 (288)
T 3d1u_A 97 PTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKVLD 176 (288)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 42 1 233321110 00124543211 0 111122233
Q ss_pred HHH----hcCCCCeeecCCCCCCeEecCCCCeEEeeccccc
Q 006886 450 FIH----SEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH 486 (627)
Q Consensus 450 ~LH----~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~ 486 (627)
.+. ....+.++|+|+.+.||+++.+ .+.|.|| .+.
T Consensus 177 ~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~ 215 (288)
T 3d1u_A 177 ALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAH 215 (288)
T ss_dssp THHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCE
T ss_pred HHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcC
Confidence 333 1234679999999999999884 5889999 553
No 409
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.20 E-value=6.9e-08 Score=106.88 Aligned_cols=126 Identities=21% Similarity=0.192 Sum_probs=74.0
Q ss_pred CCCCcccEEEccCcccCccCCCCCC-CcccccEEeeecc-ccccc-Cchhh--ccccccccccccccccCCccccc----
Q 006886 91 GKLDALKILSLRSNYLNGTLPSDIT-SISSLQYVYLQNN-YFSGV-LPAFR--SLQLNALDLSFNAFTGNIPPGFQ---- 161 (627)
Q Consensus 91 ~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~l~~N-~l~~~-~~~~~--~~~L~~L~ls~N~l~~~~p~~~~---- 161 (627)
..+++|+.|+|++|.+++..+..+. .+++|++|+|++| .++.. ++.+. ..+|++|+|++|.+++..+..+.
T Consensus 102 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~ 181 (594)
T 2p1m_B 102 SSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPD 181 (594)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCT
T ss_pred HhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhh
Confidence 3567777777777777766555554 5677777777777 44432 22222 13677777777777654443333
Q ss_pred cccccccccccCCc--cccc-CCCC--CCCccceeeccCCCccccCCCCCCCCCCCcccC
Q 006886 162 NLTRLHLLNLQNNS--ISGA-IPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 162 ~l~~L~~L~l~~N~--l~~~-~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
.+++|+.|++++|. ++.. ++.. .+++|+.|++++|...+.+|..+.++++|+.++
T Consensus 182 ~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~ 241 (594)
T 2p1m_B 182 TYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELG 241 (594)
T ss_dssp TCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEE
T ss_pred cCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcc
Confidence 45677777777776 2110 0111 457777777777732223555555555555553
No 410
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.15 E-value=4.8e-08 Score=108.13 Aligned_cols=108 Identities=12% Similarity=0.060 Sum_probs=60.3
Q ss_pred CCCcccEEEccCcccCccCCCCCC-CcccccEEeee--c----ccccccCch------hhc-cccccccccccccccCCc
Q 006886 92 KLDALKILSLRSNYLNGTLPSDIT-SISSLQYVYLQ--N----NYFSGVLPA------FRS-LQLNALDLSFNAFTGNIP 157 (627)
Q Consensus 92 ~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~l~--~----N~l~~~~~~------~~~-~~L~~L~ls~N~l~~~~p 157 (627)
.+++|+.|+++.|.+++..+..+. .+++|+.|+|+ + |.++..+.. +.. .+|+.|+|++ .+++..+
T Consensus 370 ~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~ 448 (594)
T 2p1m_B 370 GCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVF 448 (594)
T ss_dssp HCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHH
T ss_pred hchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHH
Confidence 366777777777777655444443 46677777777 3 455533221 111 2566677655 4554444
Q ss_pred ccccc-ccccccccccCCcccccCCC---CCCCccceeeccCCCccc
Q 006886 158 PGFQN-LTRLHLLNLQNNSISGAIPP---LNLPRLKILNFSNNNLNG 200 (627)
Q Consensus 158 ~~~~~-l~~L~~L~l~~N~l~~~~p~---~~~~~L~~L~l~~N~l~~ 200 (627)
..+.. +++|+.|+|++|.+++.... ..+++|+.|+|++|++++
T Consensus 449 ~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~ 495 (594)
T 2p1m_B 449 EYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGD 495 (594)
T ss_dssp HHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCH
T ss_pred HHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcH
Confidence 44444 56667777776666543221 145666777777776643
No 411
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.14 E-value=4.6e-06 Score=85.86 Aligned_cols=79 Identities=14% Similarity=0.114 Sum_probs=55.0
Q ss_pred ccc-CcCCceeEEEEEec-------CCcEEEEEEecccc---c-CHHHHHHHHHHHHHhccC--CCeeeeeeEEeeC---
Q 006886 340 EVL-GKGSYGSTYKAILE-------DGTTVVVKRLREVA---A-TKREFEQQMEVVGTIGKH--SNVVPVRAYYYSK--- 402 (627)
Q Consensus 340 ~~l-g~G~~g~Vy~~~~~-------~~~~vavK~l~~~~---~-~~~~~~~e~~~l~~l~~h--~niv~l~~~~~~~--- 402 (627)
+.| +.|....+|+.... ++..+++|+-.... . ....+..|.+++..+..+ -.+.+++.++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 457 78888999998764 26678898765432 1 234678888888888655 3456677776554
Q ss_pred CceEEEEecCCCCCHH
Q 006886 403 DEKLVVYSYMPAGSLF 418 (627)
Q Consensus 403 ~~~~lv~e~~~~g~L~ 418 (627)
+..++||||++|..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 3468999999886653
No 412
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.12 E-value=1.2e-05 Score=82.92 Aligned_cols=144 Identities=13% Similarity=0.069 Sum_probs=87.9
Q ss_pred cccCcCCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHHHhccCC-CeeeeeeEEeeC-CceEEEEecCCCCCH
Q 006886 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHS-NVVPVRAYYYSK-DEKLVVYSYMPAGSL 417 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~-niv~l~~~~~~~-~~~~lv~e~~~~g~L 417 (627)
+.++.|....+|+... ++..+++|.-... ..+..|..++..+..+. .+.+++.++... +..++||||++|.++
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~l 121 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSCA----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTL 121 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESCC----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEET
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCch----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCCc
Confidence 5678899999999876 4788999976432 35889999999885432 244566666554 567899999997655
Q ss_pred HH------------------HhhhcCCCC----------C--CCCCHHHHH---------------------HHHHHHHH
Q 006886 418 FM------------------LLHRNRSDG----------G--TALDWNSRM---------------------KIALGTAR 446 (627)
Q Consensus 418 ~~------------------~l~~~~~~~----------~--~~l~~~~~~---------------------~i~~~ia~ 446 (627)
.+ .++...... . ..-+|.... .....+..
T Consensus 122 ~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 201 (362)
T 3ovc_A 122 QDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQALDE 201 (362)
T ss_dssp TTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHHHHH
Confidence 31 112111000 0 001121110 11111222
Q ss_pred HHHHHHhcC-CCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006886 447 GIAFIHSEG-GAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 447 ~l~~LH~~~-~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~ 488 (627)
.+.++.... .+.++|+|+++.||++++++.+.|+||+.+...
T Consensus 202 l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 202 LMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 222332111 145899999999999988777889999988654
No 413
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.11 E-value=5.2e-06 Score=86.81 Aligned_cols=77 Identities=16% Similarity=0.145 Sum_probs=44.0
Q ss_pred cEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhh-cc-ccccccc
Q 006886 70 RVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFR-SL-QLNALDL 147 (627)
Q Consensus 70 ~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~-~~-~L~~L~l 147 (627)
.++.+.|.. ++. .|+...|.++++|+.++|++|+++..-...|. ..+|+.+.|.+| +..+....+ .. +|+.++|
T Consensus 158 ~L~~i~lp~-~l~-~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l 233 (401)
T 4fdw_A 158 TVQEIVFPS-TLE-QLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEI 233 (401)
T ss_dssp CCCEEECCT-TCC-EECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEEC
T ss_pred CceEEEeCC-Ccc-EehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEec
Confidence 466777765 554 55655777777777777777777633333333 466666666633 444433322 22 4555555
Q ss_pred ccc
Q 006886 148 SFN 150 (627)
Q Consensus 148 s~N 150 (627)
..|
T Consensus 234 ~~~ 236 (401)
T 4fdw_A 234 PEN 236 (401)
T ss_dssp CTT
T ss_pred CCC
Confidence 543
No 414
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.11 E-value=2.4e-07 Score=85.96 Aligned_cols=108 Identities=18% Similarity=0.204 Sum_probs=81.6
Q ss_pred CcEEEEEcCCC-Ccccc----cCccccCCCCcccEEEccCcccCcc----CCCCCCCcccccEEeeecccccccCc----
Q 006886 69 SRVIGIHLPGI-GFTGP----IPANSIGKLDALKILSLRSNYLNGT----LPSDITSISSLQYVYLQNNYFSGVLP---- 135 (627)
Q Consensus 69 ~~v~~l~l~~~-~l~~~----~~~~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~~---- 135 (627)
..++.|+|++| ++... +.. .+...++|+.|+|++|.|... +...+...++|++|+|++|.|+..--
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~-~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAE-ALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHH-HHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHH-HHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 67999999999 88642 333 577789999999999999742 23344556889999999999986421
Q ss_pred -hhhc-cccccccc--cccccccC----CccccccccccccccccCCccc
Q 006886 136 -AFRS-LQLNALDL--SFNAFTGN----IPPGFQNLTRLHLLNLQNNSIS 177 (627)
Q Consensus 136 -~~~~-~~L~~L~l--s~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 177 (627)
.+.. .+|++|+| ++|.|+.. +...+...++|++|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 1221 36999999 88999753 3345666689999999999986
No 415
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.07 E-value=8.1e-07 Score=91.42 Aligned_cols=144 Identities=14% Similarity=0.222 Sum_probs=76.1
Q ss_pred CcEEEEEcCCCCcc---------cccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCch-hh
Q 006886 69 SRVIGIHLPGIGFT---------GPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPA-FR 138 (627)
Q Consensus 69 ~~v~~l~l~~~~l~---------~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~ 138 (627)
++++.|.+..+... +.+.. .+..+++|+.|+|++|.-. .+|. + .+++|+.|+|..|.+....-. +.
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~-ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~ 214 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSP-VLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDIL 214 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHH-HHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHH
T ss_pred chhhheeecCcchhhcccccccccCHHH-HHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHH
Confidence 45666766554321 12323 4566777777777776311 2333 3 367777777777666432211 11
Q ss_pred ---ccccccccccc--cccccC-----Ccccc--ccccccccccccCCcccccCCC-----CCCCccceeeccCCCcccc
Q 006886 139 ---SLQLNALDLSF--NAFTGN-----IPPGF--QNLTRLHLLNLQNNSISGAIPP-----LNLPRLKILNFSNNNLNGS 201 (627)
Q Consensus 139 ---~~~L~~L~ls~--N~l~~~-----~p~~~--~~l~~L~~L~l~~N~l~~~~p~-----~~~~~L~~L~l~~N~l~~~ 201 (627)
..+|+.|+|+. |...+. +...+ ..+++|+.|+|++|.+.+..+. ..+++|+.|+|+.|.++..
T Consensus 215 ~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~ 294 (362)
T 2ra8_A 215 GSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDE 294 (362)
T ss_dssp HSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHH
T ss_pred HccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChH
Confidence 13677777653 221111 11112 2356777777777777642211 1467777777777777642
Q ss_pred ----CCCCCCCCCCCcccC
Q 006886 202 ----IPDSLQTFPNSSFVG 216 (627)
Q Consensus 202 ----~p~~~~~~~~l~~~~ 216 (627)
++..+..+++|+.++
T Consensus 295 G~~~L~~~L~~l~~L~~L~ 313 (362)
T 2ra8_A 295 GARLLLDHVDKIKHLKFIN 313 (362)
T ss_dssp HHHHHHTTHHHHTTCSEEE
T ss_pred HHHHHHhhcccCCcceEEE
Confidence 344434455555554
No 416
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.00 E-value=3.8e-05 Score=78.30 Aligned_cols=143 Identities=15% Similarity=0.221 Sum_probs=80.7
Q ss_pred cccCcCCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHHHhcc----CCCeeeee-e--EEeeCCceEEEEecC
Q 006886 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGK----HSNVVPVR-A--YYYSKDEKLVVYSYM 412 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~----h~niv~l~-~--~~~~~~~~~lv~e~~ 412 (627)
+.|+.|..+.||+....+| .+++|+... ...+...|.+++..+.. .|.++... | +....+..++|++|+
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~---~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHR---PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECS---CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCC---CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 4566677889999987654 588998864 23445556666665532 23333211 1 112456678999999
Q ss_pred CCCCHH--------------HHhhhcCCCC----C-----CCCCHHHHH-------------------------------
Q 006886 413 PAGSLF--------------MLLHRNRSDG----G-----TALDWNSRM------------------------------- 438 (627)
Q Consensus 413 ~~g~L~--------------~~l~~~~~~~----~-----~~l~~~~~~------------------------------- 438 (627)
+|..+. ..+|...... . ..-.|....
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 986432 1122211100 0 112343211
Q ss_pred HHHHHHHHHHHHHHh--------c--CCCCeeecCCCCCCeEecCCCCeEEeeccccc
Q 006886 439 KIALGTARGIAFIHS--------E--GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH 486 (627)
Q Consensus 439 ~i~~~ia~~l~~LH~--------~--~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~ 486 (627)
.+...+..++.+|++ . ....++|+|+++.||+++.++.+.|+||+.+.
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 011123345666663 1 23569999999999999888899999999764
No 417
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.96 E-value=1.6e-05 Score=83.02 Aligned_cols=139 Identities=16% Similarity=0.133 Sum_probs=98.8
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCch-hhc-ccccccc
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPA-FRS-LQLNALD 146 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~L~ 146 (627)
..++.+.|+.+ ++ .|+...|.++++|+.++|.+| ++..-...|.+ .+|+.+.| .|.+..+.+. |.. .+|+.++
T Consensus 203 ~~L~~l~lp~~-l~-~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~ 277 (401)
T 4fdw_A 203 AGIEEVLLPVT-LK-EIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVT 277 (401)
T ss_dssp CCCSEEECCTT-CC-EECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEE
T ss_pred cccCEEEeCCc-hh-eehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEE
Confidence 46788888744 55 677778999999999999876 55455566766 78999999 4556666554 333 3799999
Q ss_pred ccccccc-----cCCccccccccccccccccCCcccccCCCC--CCCccceeeccCCCccccCCCCCCCCCCCccc
Q 006886 147 LSFNAFT-----GNIPPGFQNLTRLHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV 215 (627)
Q Consensus 147 ls~N~l~-----~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~ 215 (627)
+.+|.+. ..-+..|.+|++|+.++|.+ .++..-... ++.+|+.|+|.+| ++..-+..|.++ +|+.+
T Consensus 278 l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l 350 (401)
T 4fdw_A 278 TYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEV 350 (401)
T ss_dssp EESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEE
T ss_pred eCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEE
Confidence 9888765 34456788899999999984 465332222 7788999999655 664445667777 66654
No 418
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.89 E-value=8.5e-05 Score=77.55 Aligned_cols=74 Identities=14% Similarity=0.170 Sum_probs=48.7
Q ss_pred cccCcCCceeEEEEEec-CCcEEEEEEecccc--------cCHHHHHHHHHHHHHhccC-CCee-eeeeEEeeCCceEEE
Q 006886 340 EVLGKGSYGSTYKAILE-DGTTVVVKRLREVA--------ATKREFEQQMEVVGTIGKH-SNVV-PVRAYYYSKDEKLVV 408 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~--------~~~~~~~~e~~~l~~l~~h-~niv-~l~~~~~~~~~~~lv 408 (627)
+.+|.|..+.||++... +++.++||...... .....+..|.+++..+..+ +..+ +++.+ +.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 57899999999999754 46889999764321 1234567788888887543 3434 34433 44556899
Q ss_pred EecCCCC
Q 006886 409 YSYMPAG 415 (627)
Q Consensus 409 ~e~~~~g 415 (627)
|||+++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999764
No 419
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.85 E-value=0.0001 Score=73.90 Aligned_cols=140 Identities=16% Similarity=0.166 Sum_probs=91.8
Q ss_pred cccCcCCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHHHhccC--CCeeeeeeEEeeCCceEEEEecCCCCCH
Q 006886 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKH--SNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h--~niv~l~~~~~~~~~~~lv~e~~~~g~L 417 (627)
+.|+.|....+|+... ++..+++|+-... ....+..|.+.+..+..+ ..+.+++.+....+..++||||+++..+
T Consensus 42 ~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~ 118 (312)
T 3jr1_A 42 EKLYSGEMNEIWLIND-EVQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN 118 (312)
T ss_dssp EEECCSSSSEEEEEES-SSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred EEeCCccceeeeEEEE-CCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence 4678899999999886 4678889986542 356788999999888654 5677788888777889999999998754
Q ss_pred H-----------HHhhhcCCCC--C---------------CCCCHHHHH---HHHHH----------------HHHH-HH
Q 006886 418 F-----------MLLHRNRSDG--G---------------TALDWNSRM---KIALG----------------TARG-IA 449 (627)
Q Consensus 418 ~-----------~~l~~~~~~~--~---------------~~l~~~~~~---~i~~~----------------ia~~-l~ 449 (627)
. ..+|...... + -.-+|.... ++..+ +... ..
T Consensus 119 ~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~~ 198 (312)
T 3jr1_A 119 KQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVAD 198 (312)
T ss_dssp CTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 1 1233321100 0 012565332 11111 1111 22
Q ss_pred HHHh-cCCCCeeecCCCCCCeEecCCCCeEEeecc
Q 006886 450 FIHS-EGGAKFTHGNIKSSNVLLTQDLNGCISDVG 483 (627)
Q Consensus 450 ~LH~-~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG 483 (627)
.|.. ...+.++|+|+.+.|++++.++ +.|.||.
T Consensus 199 ~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 199 TLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 3322 2246799999999999999887 8888974
No 420
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.74 E-value=2.2e-06 Score=88.22 Aligned_cols=147 Identities=12% Similarity=0.146 Sum_probs=94.6
Q ss_pred CCcEEEEEcCCCCccc-cc-------CccccCCCCcccEEEccCcccC---------ccCCCCCCCcccccEEeeecccc
Q 006886 68 RSRVIGIHLPGIGFTG-PI-------PANSIGKLDALKILSLRSNYLN---------GTLPSDITSISSLQYVYLQNNYF 130 (627)
Q Consensus 68 ~~~v~~l~l~~~~l~~-~~-------~~~~l~~l~~L~~L~L~~N~l~---------~~~p~~~~~l~~L~~L~l~~N~l 130 (627)
..+|+.|.+...+..| +. .. ++.+|++|+.|.+..+... +.++..+..+++|+.|+|++|.-
T Consensus 106 ~~~v~~L~lg~~~~~~~~~~~~~~~L~~-s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~ 184 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEGEDCSDIADGIVE-NKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNN 184 (362)
T ss_dssp GGGCSEEEECCCCSSSCCSHHHHHHHHT-THHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBT
T ss_pred chhcceEEEcccccCCCcHHHHHHHHHH-hhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCC
Confidence 4578899988777653 21 22 4567889999999776432 12333345679999999999842
Q ss_pred cccCchhhccccccccccccccccCCccccc--cccccccccccC--Cccccc---------CCCCCCCccceeeccCCC
Q 006886 131 SGVLPAFRSLQLNALDLSFNAFTGNIPPGFQ--NLTRLHLLNLQN--NSISGA---------IPPLNLPRLKILNFSNNN 197 (627)
Q Consensus 131 ~~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~--~l~~L~~L~l~~--N~l~~~---------~p~~~~~~L~~L~l~~N~ 197 (627)
... +.+...+|+.|+|..|.++...-..+. .+++|+.|+|+. |...+. +....+++|+.|+|++|.
T Consensus 185 l~l-~~~~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~ 263 (362)
T 2ra8_A 185 LSI-GKKPRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAE 263 (362)
T ss_dssp CBC-CSCBCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCT
T ss_pred cee-ccccCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCC
Confidence 222 333345899999999888754333444 689999999863 332221 111258999999999999
Q ss_pred ccccCCCCC---CCCCCCcccC
Q 006886 198 LNGSIPDSL---QTFPNSSFVG 216 (627)
Q Consensus 198 l~~~~p~~~---~~~~~l~~~~ 216 (627)
++...+..+ ..+++|+.++
T Consensus 264 i~~~~~~~la~a~~~~~L~~Ld 285 (362)
T 2ra8_A 264 EQNVVVEMFLESDILPQLETMD 285 (362)
T ss_dssp THHHHHHHHHHCSSGGGCSEEE
T ss_pred CchHHHHHHHhCccCCCCCEEE
Confidence 875433222 2345555554
No 421
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.62 E-value=0.00046 Score=72.54 Aligned_cols=74 Identities=14% Similarity=0.155 Sum_probs=47.5
Q ss_pred CCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCCCC-----CCccccCccccCCC---CCCCcchhHHHHHHHHHH
Q 006886 456 GAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTAT-----RTIGYRAPEVTETR---KASQKSDVYSFGVLLLEM 527 (627)
Q Consensus 456 ~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~~~~~-----~t~~y~aPE~~~~~---~~~~~~Dv~S~Gvvl~el 527 (627)
.+.++|+|+++.|||++.++ ++|+||+.+.......... -...|.+|+..... ......++......+|+.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 35699999999999999876 9999999887543211000 01246666655321 112235556777788877
Q ss_pred HhC
Q 006886 528 LTG 530 (627)
Q Consensus 528 ~tg 530 (627)
+++
T Consensus 310 y~~ 312 (420)
T 2pyw_A 310 FNK 312 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 422
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.52 E-value=0.00063 Score=67.46 Aligned_cols=73 Identities=21% Similarity=0.287 Sum_probs=52.8
Q ss_pred cccCcCCceeEEEEEecCCcEEEEEEecccc-cCHHHHHHHHHHHHHhccCCC--eeeeeeEEeeCCceEEEEecCCCCC
Q 006886 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVA-ATKREFEQQMEVVGTIGKHSN--VVPVRAYYYSKDEKLVVYSYMPAGS 416 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~-~~~~~~~~e~~~l~~l~~h~n--iv~l~~~~~~~~~~~lv~e~~~~g~ 416 (627)
+.+|.|..+.||+.+..||+.|++|+-.... .....|..|.+.++.+.+... +.+++++ . ..++||||++++.
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~--~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--D--DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--E--TTEEEEECCCCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--c--CceEEEEeecccC
Confidence 5689999999999999999999999865432 234568899999998854322 3334433 2 3468999998764
No 423
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.51 E-value=0.00093 Score=67.48 Aligned_cols=145 Identities=17% Similarity=0.123 Sum_probs=83.7
Q ss_pred ccCcCCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHHHhccCC-CeeeeeeE-----EeeCCceEEEEecCCC
Q 006886 341 VLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHS-NVVPVRAY-----YYSKDEKLVVYSYMPA 414 (627)
Q Consensus 341 ~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~-niv~l~~~-----~~~~~~~~lv~e~~~~ 414 (627)
.++ |....||+....+|+.+++|...........+..|..++..+..+. .+.+++.. ....+..++|++|++|
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G 111 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG 111 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCC
Confidence 455 7778899988777778999998644445677888888888875432 13334332 1224456789999987
Q ss_pred CCHH-----H---------HhhhcCCC----CCCCCCHHHH----HHH---------------HHHHHHHHHHHHhc---
Q 006886 415 GSLF-----M---------LLHRNRSD----GGTALDWNSR----MKI---------------ALGTARGIAFIHSE--- 454 (627)
Q Consensus 415 g~L~-----~---------~l~~~~~~----~~~~l~~~~~----~~i---------------~~~ia~~l~~LH~~--- 454 (627)
..+. . .+|..... .....++... ..+ ...+...+..+.+.
T Consensus 112 ~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 191 (328)
T 1zyl_A 112 RQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWRE 191 (328)
T ss_dssp EECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 5431 0 11211100 0112232211 001 11111223333321
Q ss_pred -CCCCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006886 455 -GGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 455 -~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~ 488 (627)
....++|+|+++.||+++ + .+.|+||+.+...
T Consensus 192 ~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g 224 (328)
T 1zyl_A 192 DFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARNG 224 (328)
T ss_dssp CSCCEECCSSCSGGGEEES-S-SEEECCCTTCCEE
T ss_pred cCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCcC
Confidence 224589999999999999 4 8899999877543
No 424
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.30 E-value=0.0012 Score=68.03 Aligned_cols=144 Identities=11% Similarity=0.118 Sum_probs=83.9
Q ss_pred cccCcCCceeEEEEEec--------CCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEec
Q 006886 340 EVLGKGSYGSTYKAILE--------DGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~--------~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 411 (627)
+.+..|-...+|+.... +++.+++|+..........+.+|.++++.+..+.-..++++++.+ .+|+||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~ 131 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQY 131 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEEC
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEE
Confidence 45666777889998864 247899988643333456677899999888665544566665532 289999
Q ss_pred CCCCCHHH-----------------HhhhcCCCCCCCCC--HHHHHHHHHHHH-------------------HHHHHH--
Q 006886 412 MPAGSLFM-----------------LLHRNRSDGGTALD--WNSRMKIALGTA-------------------RGIAFI-- 451 (627)
Q Consensus 412 ~~~g~L~~-----------------~l~~~~~~~~~~l~--~~~~~~i~~~ia-------------------~~l~~L-- 451 (627)
++|.+|.. -+|......+.... |.+..++..++. ..+.+|
T Consensus 132 i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~ 211 (379)
T 3feg_A 132 IPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRK 211 (379)
T ss_dssp CSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHH
T ss_pred ecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHH
Confidence 98854421 11221111112222 334443433321 123333
Q ss_pred --HhcC-CCCeeecCCCCCCeEecCC----CCeEEeecccccc
Q 006886 452 --HSEG-GAKFTHGNIKSSNVLLTQD----LNGCISDVGLAHL 487 (627)
Q Consensus 452 --H~~~-~~~ivH~Dlk~~NILl~~~----~~~ki~DfG~a~~ 487 (627)
.... ...++|+|+.+.||+++.+ +.+.|+||..+..
T Consensus 212 ~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 212 LLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2222 2358999999999999877 7899999998753
No 425
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.18 E-value=0.0025 Score=64.10 Aligned_cols=145 Identities=10% Similarity=0.072 Sum_probs=80.3
Q ss_pred cccCcCCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCC-eeeeeeE------EeeCCceEEEEecC
Q 006886 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSN-VVPVRAY------YYSKDEKLVVYSYM 412 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~n-iv~l~~~------~~~~~~~~lv~e~~ 412 (627)
+.|+.|....+|+....+| .+++|..... ....++..|.+++..+..+.- +.+++.. ....+..+++++|+
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l 105 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFL 105 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeC
Confidence 4567788889999987655 6788887652 123356677888777754421 2222211 12235568999999
Q ss_pred CCCCHH--------------HHhhhcCCC--CC-----CCCCHHHHHHH------------HHHHHHHHHHHHhc----C
Q 006886 413 PAGSLF--------------MLLHRNRSD--GG-----TALDWNSRMKI------------ALGTARGIAFIHSE----G 455 (627)
Q Consensus 413 ~~g~L~--------------~~l~~~~~~--~~-----~~l~~~~~~~i------------~~~ia~~l~~LH~~----~ 455 (627)
+|..+. ..+|..... .. ....|.....- ...+...+.++++. .
T Consensus 106 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~ 185 (322)
T 2ppq_A 106 EGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDL 185 (322)
T ss_dssp CCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSS
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcccC
Confidence 885431 012221110 00 01124331110 11244556666542 1
Q ss_pred CCCeeecCCCCCCeEecCCCCeEEeeccccc
Q 006886 456 GAKFTHGNIKSSNVLLTQDLNGCISDVGLAH 486 (627)
Q Consensus 456 ~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~ 486 (627)
...++|+|+++.|||++++..+.|+||+.+.
T Consensus 186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 186 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 2358999999999999987666899999764
No 426
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.17 E-value=0.0012 Score=65.95 Aligned_cols=141 Identities=11% Similarity=-0.027 Sum_probs=74.4
Q ss_pred cccCcCCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecC-CCCCHH
Q 006886 340 EVLGKGSYGSTYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYM-PAGSLF 418 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~-~~g~L~ 418 (627)
+.|+.|....+|+. ..+++|+-............|.+++..+..+.-..+++++ ..+..++|+||+ ++-++.
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~l~ 96 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQTMS 96 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEECC
T ss_pred eEcCCcccccccee-----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCccCC
Confidence 56888889999998 4588887754321111235677777777544322344443 344457899999 554332
Q ss_pred H------------------HhhhcCCCCCCCCCHHHH-HHHHH--------------HHHHHH----HHHHh-cCCCCee
Q 006886 419 M------------------LLHRNRSDGGTALDWNSR-MKIAL--------------GTARGI----AFIHS-EGGAKFT 460 (627)
Q Consensus 419 ~------------------~l~~~~~~~~~~l~~~~~-~~i~~--------------~ia~~l----~~LH~-~~~~~iv 460 (627)
. .+|..........+.... ..+.. .+...+ ..+.. ...+.++
T Consensus 97 ~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~ 176 (301)
T 3dxq_A 97 PEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLAAC 176 (301)
T ss_dssp HHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCEEE
T ss_pred HhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCceee
Confidence 1 111111100111111111 11100 011111 11211 1224589
Q ss_pred ecCCCCCCeEecCCCCeEEeeccccccc
Q 006886 461 HGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 461 H~Dlk~~NILl~~~~~~ki~DfG~a~~~ 488 (627)
|+|+.+.||+ ..++.+.|+||..+...
T Consensus 177 HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 177 HCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp CSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred ccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 9999999999 56677899999987643
No 427
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.17 E-value=0.0013 Score=66.59 Aligned_cols=145 Identities=13% Similarity=0.080 Sum_probs=73.5
Q ss_pred cccCcCCcee-EEEEEecCCcEEEEEEecccccCHHHHHHHHHHHHHhccCC-CeeeeeeEEeeCCceEEEEecCCCCCH
Q 006886 340 EVLGKGSYGS-TYKAILEDGTTVVVKRLREVAATKREFEQQMEVVGTIGKHS-NVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 340 ~~lg~G~~g~-Vy~~~~~~~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~-niv~l~~~~~~~~~~~lv~e~~~~g~L 417 (627)
+.|+.|+... +|+....++..+++|...... ..++..|++++..+..+. .+.+++.+... .. +++||++.+..+
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~--~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~-~g-~ll~e~l~~~~l 99 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE--GGDTQPFVDLAQYLRNLDISAPEIYAEEHA-RG-LLLIEDLGDALF 99 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT--TCCSHHHHHHHHHHHHTTCBCCCEEEEETT-TT-EEEECCCCSCBH
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC--CccccHHHHHHHHHHhCCCCCCceeeecCC-CC-EEEEeeCCCcch
Confidence 3455554444 667665446777777643321 133456677777775442 23445555332 23 789999977666
Q ss_pred HHHhhhcC---------------------CCCCCCCCHHHHH--------------------HHHHHHHHHHHHHHh---
Q 006886 418 FMLLHRNR---------------------SDGGTALDWNSRM--------------------KIALGTARGIAFIHS--- 453 (627)
Q Consensus 418 ~~~l~~~~---------------------~~~~~~l~~~~~~--------------------~i~~~ia~~l~~LH~--- 453 (627)
.+++.... ......++..... .....+...+..+.+
T Consensus 100 ~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~ 179 (333)
T 3csv_A 100 TEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQL 179 (333)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 54443210 0000111111000 000111222333311
Q ss_pred cCCCCeeecCCCCCCeEecCC----CCeEEeeccccccc
Q 006886 454 EGGAKFTHGNIKSSNVLLTQD----LNGCISDVGLAHLI 488 (627)
Q Consensus 454 ~~~~~ivH~Dlk~~NILl~~~----~~~ki~DfG~a~~~ 488 (627)
.....++|||+.+.||+++.+ +.+.|+||+.+...
T Consensus 180 ~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 180 EGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred cCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 123469999999999999875 67899999987654
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.05 E-value=0.00022 Score=64.57 Aligned_cols=81 Identities=6% Similarity=0.051 Sum_probs=39.4
Q ss_pred cccEEEccCcccCccCCCCCCCcccccEEeeeccc-ccccC-chhhc-----cccccccccccc-cccCCcccccccccc
Q 006886 95 ALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNY-FSGVL-PAFRS-----LQLNALDLSFNA-FTGNIPPGFQNLTRL 166 (627)
Q Consensus 95 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~-~~~~~-----~~L~~L~ls~N~-l~~~~p~~~~~l~~L 166 (627)
+|+.|||+++.|+..--..+..+++|+.|+|+++. ++..- ..+.. .+|+.|+|+++. +|..-=..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 35555555555543322334556666666666653 33211 11111 146666666653 543211235556666
Q ss_pred ccccccCCc
Q 006886 167 HLLNLQNNS 175 (627)
Q Consensus 167 ~~L~l~~N~ 175 (627)
++|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 777666653
No 429
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.99 E-value=0.0066 Score=63.74 Aligned_cols=72 Identities=8% Similarity=0.113 Sum_probs=49.3
Q ss_pred cccCcCCceeEEEEEecC--------CcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEec
Q 006886 340 EVLGKGSYGSTYKAILED--------GTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 411 (627)
+.|+.|....+|+....+ +..+++|+.... .....+..|..++..+..+.-..++++.+. + .+|+||
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~e~ 153 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLEEY 153 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEECC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEEEE
Confidence 467788889999998753 478999987432 222556678888888865544456666543 2 389999
Q ss_pred CCCCC
Q 006886 412 MPAGS 416 (627)
Q Consensus 412 ~~~g~ 416 (627)
++|-+
T Consensus 154 l~G~~ 158 (429)
T 1nw1_A 154 IPSRP 158 (429)
T ss_dssp CCEEE
T ss_pred eCCcc
Confidence 98633
No 430
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.87 E-value=0.00067 Score=58.42 Aligned_cols=36 Identities=25% Similarity=0.192 Sum_probs=18.0
Q ss_pred ccccccccccccccCCccccccccccccccccCCcc
Q 006886 141 QLNALDLSFNAFTGNIPPGFQNLTRLHLLNLQNNSI 176 (627)
Q Consensus 141 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 176 (627)
+|+.|+|++|+|+...+..|..+++|+.|+|++|.+
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 344455555555533333455555555555555544
No 431
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.84 E-value=0.002 Score=66.24 Aligned_cols=73 Identities=11% Similarity=0.085 Sum_probs=43.5
Q ss_pred cccCcCCceeEEEEEecC---------CcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEe
Q 006886 340 EVLGKGSYGSTYKAILED---------GTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYS 410 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~---------~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e 410 (627)
+.++.|....+|+....+ +..+++|+.........+...|.+++..+..+.-..++++.. . -++|+|
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~e 114 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIEE 114 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEEE
Confidence 457778888999998654 267888876543221112467788888775553334555443 2 368999
Q ss_pred cCCCCC
Q 006886 411 YMPAGS 416 (627)
Q Consensus 411 ~~~~g~ 416 (627)
|++|-.
T Consensus 115 ~i~G~~ 120 (369)
T 3c5i_A 115 WLYGDP 120 (369)
T ss_dssp CCCSEE
T ss_pred EecCCc
Confidence 998743
No 432
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.67 E-value=0.014 Score=61.66 Aligned_cols=74 Identities=7% Similarity=0.069 Sum_probs=46.8
Q ss_pred cccCcCCceeEEEEEecC-CcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEecCCCCCH
Q 006886 340 EVLGKGSYGSTYKAILED-GTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSYMPAGSL 417 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 417 (627)
+.|+.|-...+|+....+ +..+++|+........-+...|..++..+..+.-..++++.+. + .+|+||++|-+|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 567788889999998765 4778888764322211123578888888855443456666652 2 359999987443
No 433
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.63 E-value=0.0071 Score=61.35 Aligned_cols=32 Identities=25% Similarity=0.257 Sum_probs=27.9
Q ss_pred CCeeecCCCCCCeEecCCCCeEEeeccccccc
Q 006886 457 AKFTHGNIKSSNVLLTQDLNGCISDVGLAHLI 488 (627)
Q Consensus 457 ~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~ 488 (627)
..++|+|+.+.||+++.++.+.|+||+.+...
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 45899999999999998888999999876543
No 434
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.61 E-value=0.0056 Score=63.52 Aligned_cols=54 Identities=13% Similarity=0.075 Sum_probs=25.8
Q ss_pred cccccccccccccccCCcccccCCCC---CCCccceeeccCCCccccCCCCCCCCCCCcc
Q 006886 158 PGFQNLTRLHLLNLQNNSISGAIPPL---NLPRLKILNFSNNNLNGSIPDSLQTFPNSSF 214 (627)
Q Consensus 158 ~~~~~l~~L~~L~l~~N~l~~~~p~~---~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~ 214 (627)
..|.++++|+.+.+.++..+ ++.. ++.+|+.+++..| ++..-...|.++..|+.
T Consensus 156 ~aF~~c~~L~~i~l~~~~~~--I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~ 212 (394)
T 4fs7_A 156 EAFATCESLEYVSLPDSMET--LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLEN 212 (394)
T ss_dssp TTTTTCTTCCEEECCTTCCE--ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCB
T ss_pred hhhcccCCCcEEecCCccce--eccccccCCCCceEEEcCCC-ceEeCchhhccccccce
Confidence 34566666666666544322 2221 4556666666554 33222334444444443
No 435
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.59 E-value=0.0032 Score=54.07 Aligned_cols=56 Identities=20% Similarity=0.230 Sum_probs=43.5
Q ss_pred EEEcCCCCcc-cccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeeccccc
Q 006886 73 GIHLPGIGFT-GPIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFS 131 (627)
Q Consensus 73 ~l~l~~~~l~-~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 131 (627)
.++.++++|+ ..+|.+ + -++|+.|+|++|+|+..-+..|..+++|++|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~-l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTA-F--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSC-C--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCC-C--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 6788888887 467752 2 246889999999999655667788999999999988775
No 436
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.55 E-value=0.025 Score=52.47 Aligned_cols=102 Identities=9% Similarity=0.043 Sum_probs=66.5
Q ss_pred CHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeecccccccCCCCCCC
Q 006886 416 SLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAHLINFPTTAT 495 (627)
Q Consensus 416 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~~~~~~~~~~ 495 (627)
+|.+.|... +.++++.+++.++.|.+.+|.-+-.... + ..+=+.|..|++..+|.+...+ +.+. .
T Consensus 34 SL~eIL~~~----~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~--------~ 98 (229)
T 2yle_A 34 SLEEILRLY----NQPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD--------A 98 (229)
T ss_dssp EHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred cHHHHHHHc----CCCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc--------c
Confidence 789999865 4689999999999999998776622110 1 1222346899999999997753 1111 1
Q ss_pred CCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCC
Q 006886 496 RTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAP 533 (627)
Q Consensus 496 ~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p 533 (627)
....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 99 ~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 99 GEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp --------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred cccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 123467888764 3557888999999999998875544
No 437
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.51 E-value=0.00014 Score=67.20 Aligned_cols=86 Identities=14% Similarity=0.067 Sum_probs=43.9
Q ss_pred ccCCCCcccEEEccCc-ccCcc----CCCCCCCcccccEEeeecccccccCch----hh--ccccccccccccccccC--
Q 006886 89 SIGKLDALKILSLRSN-YLNGT----LPSDITSISSLQYVYLQNNYFSGVLPA----FR--SLQLNALDLSFNAFTGN-- 155 (627)
Q Consensus 89 ~l~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~~~----~~--~~~L~~L~ls~N~l~~~-- 155 (627)
.+.+-+.|+.|+|++| .|... +-..+..=+.|+.|+|++|+|...--. .. ...|+.|+|++|.|...
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 3445566777777764 55421 122233445677777777776532111 11 12466777777766531
Q ss_pred --CccccccccccccccccCC
Q 006886 156 --IPPGFQNLTRLHLLNLQNN 174 (627)
Q Consensus 156 --~p~~~~~l~~L~~L~l~~N 174 (627)
+-..+..-+.|+.|+|++|
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHHhhCCceeEEECCCC
Confidence 1123333445666666644
No 438
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.15 E-value=0.00066 Score=62.64 Aligned_cols=109 Identities=8% Similarity=0.131 Sum_probs=72.1
Q ss_pred CCcEEEEEcCCC-Ccccc----cCccccCCCCcccEEEccCcccCccCCCCCC----CcccccEEeeecccccccCch--
Q 006886 68 RSRVIGIHLPGI-GFTGP----IPANSIGKLDALKILSLRSNYLNGTLPSDIT----SISSLQYVYLQNNYFSGVLPA-- 136 (627)
Q Consensus 68 ~~~v~~l~l~~~-~l~~~----~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~----~l~~L~~L~l~~N~l~~~~~~-- 136 (627)
...++.|+|++| ++... +-. .+..=+.|+.|+|++|.|...--..|. .=+.|++|+|++|+|+..--.
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~-aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~al 118 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIE-AACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 118 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHH-HHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHH-HHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHH
Confidence 357899999986 66421 222 567778899999999999754333333 347899999999999854221
Q ss_pred ---hh-cccccccccccccc---cc----CCccccccccccccccccCCccc
Q 006886 137 ---FR-SLQLNALDLSFNAF---TG----NIPPGFQNLTRLHLLNLQNNSIS 177 (627)
Q Consensus 137 ---~~-~~~L~~L~ls~N~l---~~----~~p~~~~~l~~L~~L~l~~N~l~ 177 (627)
+. ...|+.|+|++|.. .. .+-..+..-+.|+.|+++.|.+.
T Consensus 119 a~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 119 LRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 11 13599999987643 31 12234455567777877776653
No 439
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.11 E-value=0.0067 Score=62.95 Aligned_cols=110 Identities=13% Similarity=0.232 Sum_probs=75.1
Q ss_pred cCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhh-c-cccccccccccccccCCcccccc
Q 006886 85 IPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFR-S-LQLNALDLSFNAFTGNIPPGFQN 162 (627)
Q Consensus 85 ~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~-~-~~L~~L~ls~N~l~~~~p~~~~~ 162 (627)
+....|.+.++|+.+.+.++..+ .-...|.++++|+.+.+. +.+..+....+ . .+|+.++|..| ++..-..+|.+
T Consensus 256 i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~ 332 (394)
T 4gt6_A 256 IETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAG 332 (394)
T ss_dssp ECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT
T ss_pred cccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhC
Confidence 34446888888888888766554 555677888888888885 45555554433 3 37888888765 55344557888
Q ss_pred ccccccccccCCcccccCCC---CCCCccceeeccCCCcc
Q 006886 163 LTRLHLLNLQNNSISGAIPP---LNLPRLKILNFSNNNLN 199 (627)
Q Consensus 163 l~~L~~L~l~~N~l~~~~p~---~~~~~L~~L~l~~N~l~ 199 (627)
|++|+.+.|..+ ++ .+.. .++.+|+.+++.+|...
T Consensus 333 C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~~~ 370 (394)
T 4gt6_A 333 CEQLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGSRSQ 370 (394)
T ss_dssp CTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSCHHH
T ss_pred CCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCceee
Confidence 888888888654 44 3433 27888888888887653
No 440
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=95.91 E-value=0.019 Score=59.04 Aligned_cols=125 Identities=11% Similarity=0.100 Sum_probs=83.8
Q ss_pred cccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCchhhc--cccccccccccccccCCccccccccc
Q 006886 88 NSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPAFRS--LQLNALDLSFNAFTGNIPPGFQNLTR 165 (627)
Q Consensus 88 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~ 165 (627)
..+....+|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++.+....+. .+|+.+.+..+ ++..-...|.++++
T Consensus 211 ~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~ 287 (379)
T 4h09_A 211 YGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSN 287 (379)
T ss_dssp TTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTT
T ss_pred cccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccc
Confidence 35677788888888765 44355567788888988888765 5544443222 36788887654 44334457888889
Q ss_pred cccccccCCcccccCCCC--CCCccceeeccCCCccccCCCCCCCCCCCcccC
Q 006886 166 LHLLNLQNNSISGAIPPL--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 166 L~~L~l~~N~l~~~~p~~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
|+.+.+.+|.++..-... ++.+|+.+.|.+| ++..-...|.++.+|+.+.
T Consensus 288 L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ 339 (379)
T 4h09_A 288 LTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTIS 339 (379)
T ss_dssp CCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCC
T ss_pred cccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEE
Confidence 999988888877433332 7788888888655 5533345677777776554
No 441
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=95.82 E-value=0.0024 Score=57.69 Aligned_cols=84 Identities=11% Similarity=-0.015 Sum_probs=59.8
Q ss_pred CcEEEEEcCCCCcccccCccccCCCCcccEEEccCcc-cCccCCCCCCCc----ccccEEeeeccc-ccccC-chhhc-c
Q 006886 69 SRVIGIHLPGIGFTGPIPANSIGKLDALKILSLRSNY-LNGTLPSDITSI----SSLQYVYLQNNY-FSGVL-PAFRS-L 140 (627)
Q Consensus 69 ~~v~~l~l~~~~l~~~~~~~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~l~~N~-l~~~~-~~~~~-~ 140 (627)
-+++.|||+++.++..=-. .+..+++|+.|+|+++. |+..-=..+..+ ++|++|+|+++. ++..- ..+.. .
T Consensus 61 ~~L~~LDLs~~~Itd~GL~-~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~ 139 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFD-HMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFR 139 (176)
T ss_dssp CCEEEEEEESCCCCGGGGG-GGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCT
T ss_pred ceEeEEeCcCCCccHHHHH-HhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCC
Confidence 4799999999998754223 57899999999999984 765332334443 479999999975 66421 12222 4
Q ss_pred ccccccccccc-cc
Q 006886 141 QLNALDLSFNA-FT 153 (627)
Q Consensus 141 ~L~~L~ls~N~-l~ 153 (627)
+|+.|+|+++. ++
T Consensus 140 ~L~~L~L~~c~~It 153 (176)
T 3e4g_A 140 NLKYLFLSDLPGVK 153 (176)
T ss_dssp TCCEEEEESCTTCC
T ss_pred CCCEEECCCCCCCC
Confidence 79999999875 44
No 442
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=95.52 E-value=0.018 Score=59.64 Aligned_cols=116 Identities=12% Similarity=0.130 Sum_probs=69.4
Q ss_pred CcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCc-hhhc-cccccccccccccccCCccccccccccccccc
Q 006886 94 DALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLP-AFRS-LQLNALDLSFNAFTGNIPPGFQNLTRLHLLNL 171 (627)
Q Consensus 94 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 171 (627)
..+..+.+.+ .++..-...|.++.+|+.+.+.++... +.. .+.. ..|+.+.+. +.++..-...|.+|++|+.++|
T Consensus 242 ~~~~~~~ip~-~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~l 318 (394)
T 4gt6_A 242 REDPAFKIPN-GVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDI 318 (394)
T ss_dssp CCCSEEECCT-TEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEEC
T ss_pred cccceEEcCC-cceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEe
Confidence 3444454433 333344556778888888888665433 222 2332 367888875 4455344457888888888888
Q ss_pred cCCcccccCCC-C--CCCccceeeccCCCccccCCCCCCCCCCCccc
Q 006886 172 QNNSISGAIPP-L--NLPRLKILNFSNNNLNGSIPDSLQTFPNSSFV 215 (627)
Q Consensus 172 ~~N~l~~~~p~-~--~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~ 215 (627)
..| ++ .+.. . ++.+|+.+.|..+ ++..-...|.++++|+.+
T Consensus 319 p~~-v~-~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i 362 (394)
T 4gt6_A 319 PEG-IT-QILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNI 362 (394)
T ss_dssp CTT-CC-EECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEE
T ss_pred CCc-cc-EehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEE
Confidence 754 44 2332 2 7788888888654 552333567777777654
No 443
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.42 E-value=0.081 Score=55.09 Aligned_cols=74 Identities=5% Similarity=0.082 Sum_probs=47.2
Q ss_pred cccCcCCceeEEEEEecC--------CcEEEEEEecccccCHHHHHHHHHHHHHhccCCCeeeeeeEEeeCCceEEEEec
Q 006886 340 EVLGKGSYGSTYKAILED--------GTTVVVKRLREVAATKREFEQQMEVVGTIGKHSNVVPVRAYYYSKDEKLVVYSY 411 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~l~~~~~~~~~~~~e~~~l~~l~~h~niv~l~~~~~~~~~~~lv~e~ 411 (627)
+.+..|-...+|+....+ +..+++|+........-+..+|.+++..+..+.-..++++.+ . .++|+||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~ef 151 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIEEF 151 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEEC
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEEE
Confidence 456667778899988753 578899886443222223457888888775554444555433 2 3689999
Q ss_pred CCCCCH
Q 006886 412 MPAGSL 417 (627)
Q Consensus 412 ~~~g~L 417 (627)
++|..|
T Consensus 152 I~G~~l 157 (424)
T 3mes_A 152 IDGEPL 157 (424)
T ss_dssp CCSEEC
T ss_pred eCCccC
Confidence 998653
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.26 E-value=0.18 Score=51.97 Aligned_cols=143 Identities=13% Similarity=0.152 Sum_probs=80.6
Q ss_pred cccCcCCceeEEEEEecC--------CcEEEEEEecccccC------------HH-------HHHHHHHHHHHhccCCCe
Q 006886 340 EVLGKGSYGSTYKAILED--------GTTVVVKRLREVAAT------------KR-------EFEQQMEVVGTIGKHSNV 392 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~l~~~~~~------------~~-------~~~~e~~~l~~l~~h~ni 392 (627)
+.|..|-...+|+....+ +..|.+++.-..... .+ ....|.++++.+..+--.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 445557777889888653 367888775332110 11 122478888888666666
Q ss_pred eeeeeEEeeCCceEEEEecCCCCCHHH-----------------HhhhcCCCCCCCCC--HHHHHHHHHHHH--------
Q 006886 393 VPVRAYYYSKDEKLVVYSYMPAGSLFM-----------------LLHRNRSDGGTALD--WNSRMKIALGTA-------- 445 (627)
Q Consensus 393 v~l~~~~~~~~~~~lv~e~~~~g~L~~-----------------~l~~~~~~~~~~l~--~~~~~~i~~~ia-------- 445 (627)
.++++++.. .+|+||+++-+|.. -+|........... |....++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 677766532 28999998744311 11221111112223 223333332221
Q ss_pred --------------HHH----HHHHhcC-CCCeeecCCCCCCeEecCC------CCeEEeeccccc
Q 006886 446 --------------RGI----AFIHSEG-GAKFTHGNIKSSNVLLTQD------LNGCISDVGLAH 486 (627)
Q Consensus 446 --------------~~l----~~LH~~~-~~~ivH~Dlk~~NILl~~~------~~~ki~DfG~a~ 486 (627)
.-+ .+|...+ ...++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 2333332 2358999999999999887 789999998764
No 445
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=95.11 E-value=0.077 Score=54.38 Aligned_cols=30 Identities=13% Similarity=0.125 Sum_probs=13.2
Q ss_pred CCCccceeeccCCCccccCCCCCCCCCCCc
Q 006886 184 NLPRLKILNFSNNNLNGSIPDSLQTFPNSS 213 (627)
Q Consensus 184 ~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~ 213 (627)
++.+|+.+.+.+|.++..-...|.++.+|+
T Consensus 284 ~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~ 313 (379)
T 4h09_A 284 GCSNLTKVVMDNSAIETLEPRVFMDCVKLS 313 (379)
T ss_dssp TCTTCCEEEECCTTCCEECTTTTTTCTTCC
T ss_pred cccccccccccccccceehhhhhcCCCCCC
Confidence 444455555544444422233444444444
No 446
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=95.02 E-value=0.077 Score=54.80 Aligned_cols=129 Identities=8% Similarity=0.038 Sum_probs=83.8
Q ss_pred ccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecccccccCch-hhc-cccccccccccccccCCccccc
Q 006886 84 PIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNNYFSGVLPA-FRS-LQLNALDLSFNAFTGNIPPGFQ 161 (627)
Q Consensus 84 ~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~L~ls~N~l~~~~p~~~~ 161 (627)
.|....|.++++|+.+.|.++ ++.+-...|.++++|+.++|.+| +..+... +.. .+|+.+.+..+ ++..-...|.
T Consensus 61 sIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~ 137 (394)
T 4fs7_A 61 SIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFK 137 (394)
T ss_dssp EECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTT
T ss_pred EhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeee
Confidence 466668999999999999754 77555678999999999999765 5544443 222 36777777655 3324445677
Q ss_pred cccccccccccCCcccccCCCCCCCccceeeccCCCccccCCCCCCCCCCCcccC
Q 006886 162 NLTRLHLLNLQNNSISGAIPPLNLPRLKILNFSNNNLNGSIPDSLQTFPNSSFVG 216 (627)
Q Consensus 162 ~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~ 216 (627)
++..++.........-+.-.-.++++|+.+.+.++..+ .-...|.++.+|+.+.
T Consensus 138 ~~~~~~~~~~~~~~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~ 191 (394)
T 4fs7_A 138 GCDFKEITIPEGVTVIGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIK 191 (394)
T ss_dssp TCCCSEEECCTTCCEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCC
T ss_pred cccccccccCccccccchhhhcccCCCcEEecCCccce-eccccccCCCCceEEE
Confidence 76555444444433322221227889999999766532 3445677777776654
No 447
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=94.70 E-value=0.021 Score=37.96 Aligned_cols=32 Identities=19% Similarity=0.038 Sum_probs=18.1
Q ss_pred ccceeeeehhhHHHHHHHHHHHHhhhhccccc
Q 006886 258 SGSIIAIAVGGCAVLFLLLALFFLCCLKKLDR 289 (627)
Q Consensus 258 ~~~ii~~~~~~~~~~~~l~~~~~~~~~r~~~~ 289 (627)
...|.+.++++++++++++++++++.+||+++
T Consensus 10 ~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 10 IPSIATGMVGALLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp SSSSTHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred cceEEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence 34456666666666666665555555555443
No 448
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=94.28 E-value=0.022 Score=37.72 Aligned_cols=32 Identities=22% Similarity=0.240 Sum_probs=18.3
Q ss_pred ccceeeeehhhHHHHHHHHHHHHhhhhccccc
Q 006886 258 SGSIIAIAVGGCAVLFLLLALFFLCCLKKLDR 289 (627)
Q Consensus 258 ~~~ii~~~~~~~~~~~~l~~~~~~~~~r~~~~ 289 (627)
...|.+.+++++++++++++.++++.|||+++
T Consensus 9 ~~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 9 TPLIAAGVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred cceEEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 34466666666666666665555555554443
No 449
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=93.15 E-value=0.031 Score=35.98 Aligned_cols=31 Identities=26% Similarity=0.356 Sum_probs=19.5
Q ss_pred ccCccceeeeehhhHHHHHHHHHHHHhhhhc
Q 006886 255 KLNSGSIIAIAVGGCAVLFLLLALFFLCCLK 285 (627)
Q Consensus 255 ~~~~~~ii~~~~~~~~~~~~l~~~~~~~~~r 285 (627)
..+.+.+.+++++.++.+++++++.++++||
T Consensus 7 ~ls~GaIAGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 7 GLTGGEIVAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCceeeeehHHHHHHHHHHHHHHHHeec
Confidence 3445667777777776666666666655544
No 450
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=90.63 E-value=0.83 Score=47.10 Aligned_cols=29 Identities=21% Similarity=0.398 Sum_probs=24.5
Q ss_pred eeecCCCCCCeEe------cCCCCeEEeecccccc
Q 006886 459 FTHGNIKSSNVLL------TQDLNGCISDVGLAHL 487 (627)
Q Consensus 459 ivH~Dlk~~NILl------~~~~~~ki~DfG~a~~ 487 (627)
++|+|+.+.|||+ +++..+.++||-.|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4567799999988753
No 451
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=89.43 E-value=0.14 Score=33.89 Aligned_cols=27 Identities=26% Similarity=0.359 Sum_probs=11.6
Q ss_pred ceeeeehhhHHHHHHHHHHHHhhhhccc
Q 006886 260 SIIAIAVGGCAVLFLLLALFFLCCLKKL 287 (627)
Q Consensus 260 ~ii~~~~~~~~~~~~l~~~~~~~~~r~~ 287 (627)
.++++++| +++++++++.++++.|||+
T Consensus 13 ~Ia~~vVG-vll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 13 SIISAVVG-ILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHH-HHHHHHHHHHHHHHHHHHC
T ss_pred chHHHHHH-HHHHHHHHHHHHhheehhh
Confidence 34555555 3333333333344434433
No 452
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=86.93 E-value=1.4 Score=40.78 Aligned_cols=116 Identities=11% Similarity=0.120 Sum_probs=77.8
Q ss_pred cCCCeeeeeeEEeeCCceEEEEecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCC
Q 006886 388 KHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEGGAKFTHGNIKSS 467 (627)
Q Consensus 388 ~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~ 467 (627)
.||+.+.. ..-.+.+...+.|+.-+.+.=...++ ..+...+++++.+|+....++++ =+|--+.|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik--------~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~ 108 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK--------SFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPD 108 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG--------GSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH--------hcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecc
Confidence 68888866 44455566555555543332222232 36788999999999887755554 468889999
Q ss_pred CeEecCCCCeEEeecccccccCCCCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 006886 468 NVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535 (627)
Q Consensus 468 NILl~~~~~~ki~DfG~a~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~ 535 (627)
||+++.++.+++.-.|+...+ +|. ..++..=.-.+=+++..+++++..|+
T Consensus 109 NL~f~~~~~p~i~~RGik~~l-------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 109 ELFFTRDGLPIAKTRGLQNVV-------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp GEEECTTSCEEESCCEETTTB-------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred eEEEcCCCCEEEEEccCccCC-------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999999877764333 221 11222223357788888999988875
No 453
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=82.57 E-value=3 Score=38.65 Aligned_cols=115 Identities=16% Similarity=0.131 Sum_probs=76.3
Q ss_pred cCCCeeeeeeEEeeCCceEEEEecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHH-HHHhcCCCCeeecCCCC
Q 006886 388 KHSNVVPVRAYYYSKDEKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIA-FIHSEGGAKFTHGNIKS 466 (627)
Q Consensus 388 ~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~-~LH~~~~~~ivH~Dlk~ 466 (627)
.||++ -...-.+++...+.|+.-+++.=...++ ..+...+++++.+++.... ++++ -+|--+.|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~--------~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P 112 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR--------KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCP 112 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH--------TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH--------hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeC
Confidence 68887 3333356667666677654544444443 2678899999988877555 4443 57888999
Q ss_pred CCeEecCCCCeEEeecccccccCCCCCCCCCccccCccccCCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 006886 467 SNVLLTQDLNGCISDVGLAHLINFPTTATRTIGYRAPEVTETRKASQKSDVYSFGVLLLEMLTGKAPLQ 535 (627)
Q Consensus 467 ~NILl~~~~~~ki~DfG~a~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~S~Gvvl~el~tg~~p~~ 535 (627)
+||++|.++.++|.-.|+-.. ++|.-+ ++.-=.-.+=+++..++.++..|+
T Consensus 113 ~NL~f~~~~~p~i~hRGi~~~-------------lpP~e~-----~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGVKES-------------LPPDEW-----DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GGEEECTTCCEEESCCEETTT-------------BSSCSC-----CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred ceEEEeCCCcEEEEEcCCccc-------------CCCCCC-----CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999999988886433 233211 111123356777888888887764
No 454
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=66.59 E-value=0.75 Score=48.41 Aligned_cols=57 Identities=7% Similarity=0.064 Sum_probs=16.3
Q ss_pred cccCcCCceeEEEEEecC-CcEEEE------EEeccccc---CHHHHHHHHHHHHHhccCCCeeeeeeEEe
Q 006886 340 EVLGKGSYGSTYKAILED-GTTVVV------KRLREVAA---TKREFEQQMEVVGTIGKHSNVVPVRAYYY 400 (627)
Q Consensus 340 ~~lg~G~~g~Vy~~~~~~-~~~vav------K~l~~~~~---~~~~~~~e~~~l~~l~~h~niv~l~~~~~ 400 (627)
+.|| ||.||+|.+.. ..+||| |..+.... ....|.+|..++..+ .|||+++.+++..
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~-~H~niv~~h~f~~ 214 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENE-QIPKYEKIHNFKV 214 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC------------------------------------CBCCCEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccc-cccccCCCcceEE
Confidence 4565 99999999864 367888 76654322 234577788888777 8999999887754
No 455
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=56.69 E-value=1.1e+02 Score=32.98 Aligned_cols=47 Identities=21% Similarity=0.121 Sum_probs=33.1
Q ss_pred CHHHHHHHHHHHHH--HHHHHHhcCCCCeeecCCCCCCeEecCCCCeEEeeccccc
Q 006886 433 DWNSRMKIALGTAR--GIAFIHSEGGAKFTHGNIKSSNVLLTQDLNGCISDVGLAH 486 (627)
Q Consensus 433 ~~~~~~~i~~~ia~--~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ki~DfG~a~ 486 (627)
.|..+..++..+|. .+.|+=.- +|=.++|||++.+|++.=+|||..-
T Consensus 453 ~~~a~~nF~~S~A~ySvv~YILGi-------gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 453 SAEVMDTYVKSCAGYCVITYILGV-------GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTC-------CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred cHHHHHHHHHHHHHHhHhheeeec-------cCCCCcceeEcCCCCEeeeehHHhh
Confidence 35555555554432 45666432 5778999999999999999999863
No 456
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=55.47 E-value=11 Score=27.02 Aligned_cols=20 Identities=35% Similarity=0.577 Sum_probs=12.3
Q ss_pred eehhhHHHHHHHHHHHHhhh
Q 006886 264 IAVGGCAVLFLLLALFFLCC 283 (627)
Q Consensus 264 ~~~~~~~~~~~l~~~~~~~~ 283 (627)
+++|+++.+++++.+.++++
T Consensus 12 ivlGg~~~lll~~glcI~cc 31 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIFFS 31 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHh
Confidence 46676666666666555543
No 457
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=53.42 E-value=1.8 Score=27.01 Aligned_cols=7 Identities=71% Similarity=0.947 Sum_probs=2.9
Q ss_pred eeeeehh
Q 006886 261 IIAIAVG 267 (627)
Q Consensus 261 ii~~~~~ 267 (627)
+++.++|
T Consensus 10 IaagVvg 16 (35)
T 1iij_A 10 IIATVVG 16 (35)
T ss_dssp HHHHHHH
T ss_pred eHHHHHH
Confidence 3344444
No 458
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=36.02 E-value=12 Score=23.02 Aligned_cols=25 Identities=20% Similarity=0.412 Sum_probs=13.5
Q ss_pred ccceeeeehhhHHHHHHHHHHHHhh
Q 006886 258 SGSIIAIAVGGCAVLFLLLALFFLC 282 (627)
Q Consensus 258 ~~~ii~~~~~~~~~~~~l~~~~~~~ 282 (627)
.+.+.+++++.+++.+++++.++++
T Consensus 6 ~gaIaGIVvgdi~~t~~i~~~vy~~ 30 (33)
T 2l34_A 6 PGVLAGIVVGDLVLTVLIALAVYFL 30 (33)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEeEeHHHHHHHHHHHHHHhhe
Confidence 3445566666665555555554443
No 459
>2llm_A Amyloid beta A4 protein; alzheimer'S disease, protein fibril; NMR {Homo sapiens} PDB: 2loh_A
Probab=41.21 E-value=8.1 Score=25.09 Aligned_cols=27 Identities=26% Similarity=0.538 Sum_probs=15.6
Q ss_pred CccceeeeehhhHHHHHHHHHHHHhhh
Q 006886 257 NSGSIIAIAVGGCAVLFLLLALFFLCC 283 (627)
Q Consensus 257 ~~~~ii~~~~~~~~~~~~l~~~~~~~~ 283 (627)
+.+++++..++++++..++++.+++.+
T Consensus 15 srga~iGL~v~gVai~~vIVvsl~mlR 41 (43)
T 2llm_A 15 NKGAIIGLMVGGVVIATVIVITLVMLK 41 (43)
Confidence 345667777666666655555544443
No 460
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=33.49 E-value=59 Score=25.59 Aligned_cols=44 Identities=7% Similarity=0.148 Sum_probs=33.5
Q ss_pred ccCccccCCCCcccEEEccCcccCccCCCCCCCcccccEEeeecc
Q 006886 84 PIPANSIGKLDALKILSLRSNYLNGTLPSDITSISSLQYVYLQNN 128 (627)
Q Consensus 84 ~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 128 (627)
.|....|.+.++|+.+.|-.+ ++.+-...|.++.+|+.+.+...
T Consensus 10 ~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 10 GMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp SSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred EecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 455667888999999988876 44355667888999998888664
No 461
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=24.81 E-value=3.6e+02 Score=26.40 Aligned_cols=79 Identities=13% Similarity=0.120 Sum_probs=42.3
Q ss_pred ceEEEEecCCCCCHHHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-CCCeee-cCCCCCCeEecCCCC-eEEe
Q 006886 404 EKLVVYSYMPAGSLFMLLHRNRSDGGTALDWNSRMKIALGTARGIAFIHSEG-GAKFTH-GNIKSSNVLLTQDLN-GCIS 480 (627)
Q Consensus 404 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-~~~ivH-~Dlk~~NILl~~~~~-~ki~ 480 (627)
..+++|+|.+|..|.+.-+... ...+...... ..+-+-+++++.... ..+.+. .--.+.|||++.++. +.++
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~~---~~~f~~~~~k--~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~I 230 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTSA---PEVLTKSTMQ--QLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPI 230 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSSH---HHHSCHHHHH--HHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEEC
T ss_pred cceehhhhcCCCccccchhhhh---hhhcCHHHHH--hhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEE
Confidence 4569999998766543211100 0012222211 112234566666554 223333 235789999987655 7888
Q ss_pred ecccccc
Q 006886 481 DVGLAHL 487 (627)
Q Consensus 481 DfG~a~~ 487 (627)
|-+.+..
T Consensus 231 Dhn~af~ 237 (342)
T 1cja_A 231 DSKIIPL 237 (342)
T ss_dssp SCCCCCC
T ss_pred cCCcccc
Confidence 9888754
No 462
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=23.14 E-value=49 Score=20.19 Aligned_cols=19 Identities=32% Similarity=0.576 Sum_probs=8.6
Q ss_pred hhhHHHHHHHHHHHHhhhh
Q 006886 266 VGGCAVLFLLLALFFLCCL 284 (627)
Q Consensus 266 ~~~~~~~~~l~~~~~~~~~ 284 (627)
+++.++++.++...|+.||
T Consensus 13 i~gl~vif~~lg~tflywr 31 (40)
T 2l9u_A 13 IAGLVVIFMMLGGTFLYWR 31 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCceeEEEc
Confidence 3444444444444444443
No 463
>2lp1_A C99; alzheimer'S D membrane protein, transmembrane Pro; NMR {Homo sapiens}
Probab=26.92 E-value=20 Score=28.83 Aligned_cols=27 Identities=26% Similarity=0.503 Sum_probs=13.7
Q ss_pred cceeeeehhhHHHHHHHHHHHHhhhhc
Q 006886 259 GSIIAIAVGGCAVLFLLLALFFLCCLK 285 (627)
Q Consensus 259 ~~ii~~~~~~~~~~~~l~~~~~~~~~r 285 (627)
+.+++..+++++++.++++.+++.++|
T Consensus 30 ~a~igL~v~~vai~~viVv~l~v~rrr 56 (122)
T 2lp1_A 30 GAIIGLMVGGVVIATVIVITLVMLKKK 56 (122)
Confidence 345666666655555444444443333
No 464
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=21.38 E-value=57 Score=22.48 Aligned_cols=15 Identities=33% Similarity=0.470 Sum_probs=6.1
Q ss_pred ceeeeehhhHHHHHH
Q 006886 260 SIIAIAVGGCAVLFL 274 (627)
Q Consensus 260 ~ii~~~~~~~~~~~~ 274 (627)
.++++++++..++.+
T Consensus 11 iIi~svl~GLLLL~L 25 (54)
T 2l8s_A 11 VILLSAFAGLLLLML 25 (54)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 344444444433333
Done!