BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006887
(627 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 115/262 (43%), Gaps = 20/262 (7%)
Query: 40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK---EDRMRVLLERLN 96
PS +L +G+G FG+V+L +S D + + A+K+L DR+R +ER
Sbjct: 23 PSQFELLKVLGQGSFGKVFLVKK-ISGSDARQLY--AMKVLKKATLKVRDRVRTKMER-- 77
Query: 97 DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAID 155
D+ ++ I L GK+ +I+ F G GD +L K + +V Y +
Sbjct: 78 DILVEVNH-PFIVKLHYAFQTEGKLYLILDFLRG--GDLFTRLSKEVMFTEEDVKFYLAE 134
Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN 215
LA + LHS GI+ +LKP N +L+E L D + GT
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF---CGTVE 191
Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 275
YMAPE RG D W F + EMLTG P G+ E +++ + +P
Sbjct: 192 YMAPEVVNR--RGHTQ-SADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK--LGMP 246
Query: 276 SGLPPAVENVLLGCFEYDLRSR 297
L P +++L F+ + +R
Sbjct: 247 QFLSPEAQSLLRMLFKRNPANR 268
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 115/262 (43%), Gaps = 20/262 (7%)
Query: 40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK---EDRMRVLLERLN 96
PS +L +G+G FG+V+L +S D + + A+K+L DR+R +ER
Sbjct: 24 PSQFELLKVLGQGSFGKVFLVKK-ISGSDARQLY--AMKVLKKATLKVRDRVRTKMER-- 78
Query: 97 DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAID 155
D+ ++ I L GK+ +I+ F G GD +L K + +V Y +
Sbjct: 79 DILVEVNH-PFIVKLHYAFQTEGKLYLILDFLRG--GDLFTRLSKEVMFTEEDVKFYLAE 135
Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN 215
LA + LHS GI+ +LKP N +L+E L D + GT
Sbjct: 136 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF---CGTVE 192
Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 275
YMAPE RG D W F + EMLTG P G+ E +++ + +P
Sbjct: 193 YMAPEVVNR--RGHTQ-SADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK--LGMP 247
Query: 276 SGLPPAVENVLLGCFEYDLRSR 297
L P +++L F+ + +R
Sbjct: 248 QFLSPEAQSLLRMLFKRNPANR 269
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 115/262 (43%), Gaps = 20/262 (7%)
Query: 40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK---EDRMRVLLERLN 96
PS +L +G+G FG+V+L +S D + + A+K+L DR+R +ER
Sbjct: 23 PSQFELLKVLGQGSFGKVFLVKK-ISGSDARQLY--AMKVLKKATLKVRDRVRTKMER-- 77
Query: 97 DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAID 155
D+ ++ I L GK+ +I+ F G GD +L K + +V Y +
Sbjct: 78 DILVEVNH-PFIVKLHYAFQTEGKLYLILDFLRG--GDLFTRLSKEVMFTEEDVKFYLAE 134
Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN 215
LA + LHS GI+ +LKP N +L+E L D + GT
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF---CGTVE 191
Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 275
YMAPE RG D W F + EMLTG P G+ E +++ + +P
Sbjct: 192 YMAPEVVNR--RGHTQ-SADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK--LGMP 246
Query: 276 SGLPPAVENVLLGCFEYDLRSR 297
L P +++L F+ + +R
Sbjct: 247 QFLSPEAQSLLRMLFKRNPANR 268
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 112/273 (41%), Gaps = 31/273 (11%)
Query: 34 TNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPV----KEDRMR 89
+N KPS IG+G FG+V LA H E+ AVK+L K++
Sbjct: 31 SNPHAKPSDFHFLKVIGKGSFGKVLLARH--KAEEV----FYAVKVLQKKAILKKKEEKH 84
Query: 90 VLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNV 149
++ ER ++ LK + L K+ ++ + G G+ L+ + L
Sbjct: 85 IMSER--NVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING--GELFYHLQRERCFLEPR 140
Query: 150 FR-YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLP 208
R YA ++A + LHS I+ +LKP N +L+ VL D +S
Sbjct: 141 ARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTF- 199
Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR 268
GTP Y+APE + P D W + EML G+ P R+ E+YD ++ +
Sbjct: 200 --CGTPEYLAPEVLH---KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK 254
Query: 269 QEIPPIPSGLPPAVEN----VLLGCFEYDLRSR 297
P L P + N +L G + D R
Sbjct: 255 ------PLQLKPNITNSARHLLEGLLQKDRTKR 281
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 110/262 (41%), Gaps = 20/262 (7%)
Query: 40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK---EDRMRVLLERLN 96
PS +L +G+G FG+V+L D H A+K+L DR+R +ER
Sbjct: 27 PSHFELLKVLGQGSFGKVFLVR---KVTRPDSGHLYAMKVLKKATLKVRDRVRTKMER-- 81
Query: 97 DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAID 155
D+ + L GK+ +I+ F G GD +L K + +V Y +
Sbjct: 82 DILADVNH-PFVVKLHYAFQTEGKLYLILDFLRG--GDLFTRLSKEVMFTEEDVKFYLAE 138
Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN 215
LA G+ LHS GI+ +LKP N +L+E L D + GT
Sbjct: 139 LALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSF---CGTVE 195
Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 275
YMAPE R S D W + + EMLTG P G+ E +++ + +P
Sbjct: 196 YMAPEVVN---RQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAK--LGMP 250
Query: 276 SGLPPAVENVLLGCFEYDLRSR 297
L +++L F+ + +R
Sbjct: 251 QFLSTEAQSLLRALFKRNPANR 272
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 128/296 (43%), Gaps = 38/296 (12%)
Query: 33 DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVL 91
+ +AW P +LKL ++G G FGEVW+AT+ +++ +VAVK + P +
Sbjct: 179 EKDAWEIPRESLKLEKKLGAGQFGEVWMATY-------NKHTKVAVKTMKPGSMS-VEAF 230
Query: 92 LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVF 150
L N +K + + L + V I II +F +GS+ D + +G K L +
Sbjct: 231 LAEAN--VMKTLQHDKLVKLHAV-VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI 287
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
++ +A+G+ + + + +L+ N +++ + + D L R
Sbjct: 288 DFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADF--------------GLARV 333
Query: 211 LGTPNYMA------PEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDE 260
+ Y A P +W PE G + ++D W F ++E++T G P G S E
Sbjct: 334 IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE 393
Query: 261 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS 316
+ A+ R +P P P + N+++ C++ RP I V + S
Sbjct: 394 VIRALERGYRMPR-PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATES 448
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 119/282 (42%), Gaps = 17/282 (6%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYH-EVAVKILHPVKEDRMRVLLERLN 96
I+ S + L RIG G FG V+ ++H +VAVKIL V + R
Sbjct: 33 IEASEVMLSTRIGSGSFGTVYKG----------KWHGDVAVKILKVVDPTPEQFQAFRNE 82
Query: 97 DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDL 156
L+ I G + + I+ ++ EGS + ++ K + + A
Sbjct: 83 VAVLRKTRHVNILLFMGY-MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQT 141
Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNY 216
AQG+ LH+K I+ ++K N L+E +GD S + + G+ +
Sbjct: 142 AQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDF-GLATVKSRWSGSQQVEQPTGSVLW 200
Query: 217 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVRRQEIPPIP 275
MAPE + + P SF++D + + + E++TG P + D+I V R P +
Sbjct: 201 MAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLS 260
Query: 276 ---SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSV 314
P A++ ++ C + RPL IL + Q+S+
Sbjct: 261 KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 124/278 (44%), Gaps = 37/278 (13%)
Query: 33 DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVL 91
D +AW P ++KL R+G G FGEVW+ + ST +VAVK L P ++
Sbjct: 4 DKDAWEIPRESIKLVKRLGAGQFGEVWMGYYNNST-------KVAVKTLKPGTMS-VQAF 55
Query: 92 LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVF 150
LE N +K + + L + I II ++ +GS+ D + +GGK+ L +
Sbjct: 56 LEEAN--LMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLI 113
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
++ +A+G+ + K + +L+ N +++E+ + D L R
Sbjct: 114 DFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADF--------------GLARV 159
Query: 211 LGTPNYMA------PEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDE 260
+ Y A P +W PE G + ++D W F + E++T G P GR+ +
Sbjct: 160 IEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNAD 219
Query: 261 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
+ A+ + +P + P + +++ C++ RP
Sbjct: 220 VMTALSQGYRMPRV-ENCPDELYDIMKMCWKEKAEERP 256
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 126/287 (43%), Gaps = 38/287 (13%)
Query: 33 DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVL 91
+ +AW P +LKL ++G G FGEVW+AT+ +++ +VAVK + P +
Sbjct: 6 EKDAWEIPRESLKLEKKLGAGQFGEVWMATY-------NKHTKVAVKTMKPGSMS-VEAF 57
Query: 92 LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVF 150
L N +K + + L + V I II +F +GS+ D + +G K L +
Sbjct: 58 LAEAN--VMKTLQHDKLVKLHAV-VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI 114
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
++ +A+G+ + + + +L+ N +++ + + D L R
Sbjct: 115 DFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADF--------------GLARV 160
Query: 211 LGTPNYMA------PEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDE 260
+ Y A P +W PE G + ++D W F ++E++T G P G S E
Sbjct: 161 IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE 220
Query: 261 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
+ A+ R +P P P + N+++ C++ RP I V
Sbjct: 221 VIRALERGYRMPR-PENCPEELYNIMMRCWKNRPEERPTFEYIQSVL 266
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 125/290 (43%), Gaps = 36/290 (12%)
Query: 33 DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVL 91
+ +AW P +LKL ++G G FGEVW+AT+ +++ +VAVK + P +
Sbjct: 173 EKDAWEIPRESLKLEKKLGAGQFGEVWMATY-------NKHTKVAVKTMKPGSMS-VEAF 224
Query: 92 LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVF 150
L N +K + + L + V I II +F +GS+ D + +G K L +
Sbjct: 225 LAEAN--VMKTLQHDKLVKLHAV-VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI 281
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
++ +A+G+ + + + +L+ N +++ + + D R
Sbjct: 282 DFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA---------------R 326
Query: 211 LGTP---NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVV 266
+G + APE G + ++D W F ++E++T G P G S E+ A+
Sbjct: 327 VGAKFPIKWTAPEAIN---FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE 383
Query: 267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS 316
R +P P P + N+++ C++ RP I V + S
Sbjct: 384 RGYRMPR-PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATES 432
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 125/292 (42%), Gaps = 19/292 (6%)
Query: 19 DDSDHLRTAVATSNDTNAWIKPSA-LKLRHRIGRGPFGEVWLATHYLSTEDCDEYH-EVA 76
+D + ++T + + ++ W P + + RIG G FG V+ ++H +VA
Sbjct: 14 EDRNRMKT-LGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKG----------KWHGDVA 62
Query: 77 VKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRM 136
VK+L+ ++ + L+ I G S ++ I+ ++ EGS
Sbjct: 63 VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHH 121
Query: 137 AQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXX 196
+ K + + A AQG+ LH+K I+ +LK N L+E +GD
Sbjct: 122 LHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATE 181
Query: 197 XXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG- 255
S + G+ +MAPE + + + P SF++D + F + E++TG P
Sbjct: 182 KSRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 240
Query: 256 RSVDEIYDAVVR---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
+ D+I V R ++ + S P A++ ++ C + RPL IL
Sbjct: 241 NNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 292
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 119/280 (42%), Gaps = 18/280 (6%)
Query: 31 SNDTNAWIKPSA-LKLRHRIGRGPFGEVWLATHYLSTEDCDEYH-EVAVKILHPVKEDRM 88
S+ ++ W P + + RIG G FG V+ ++H +VAVK+L+
Sbjct: 2 SDSSDDWEIPDGQITVGQRIGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQ 51
Query: 89 RVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSN 148
++ + L+ I G S ++ I+ ++ EGS + K +
Sbjct: 52 QLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIK 110
Query: 149 VFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLP 208
+ A AQG+ LH+K I+ +LK N L+E +GD S
Sbjct: 111 LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFE 169
Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVR 267
+ G+ +MAPE + + + P SF++D + F + E++TG P + D+I V R
Sbjct: 170 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 229
Query: 268 ---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
++ + S P A++ ++ C + RPL IL
Sbjct: 230 GYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 269
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 125/292 (42%), Gaps = 19/292 (6%)
Query: 19 DDSDHLRTAVATSNDTNAWIKPSA-LKLRHRIGRGPFGEVWLATHYLSTEDCDEYH-EVA 76
+D + ++T + + ++ W P + + RIG G FG V+ ++H +VA
Sbjct: 14 EDRNRMKT-LGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKG----------KWHGDVA 62
Query: 77 VKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRM 136
VK+L+ ++ + L+ I G S ++ I+ ++ EGS
Sbjct: 63 VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHH 121
Query: 137 AQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXX 196
+ K + + A AQG+ LH+K I+ +LK N L+E +GD
Sbjct: 122 LHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATV 181
Query: 197 XXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG- 255
S + G+ +MAPE + + + P SF++D + F + E++TG P
Sbjct: 182 KSRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 240
Query: 256 RSVDEIYDAVVR---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
+ D+I V R ++ + S P A++ ++ C + RPL IL
Sbjct: 241 NNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 292
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 125/292 (42%), Gaps = 19/292 (6%)
Query: 19 DDSDHLRTAVATSNDTNAWIKPSA-LKLRHRIGRGPFGEVWLATHYLSTEDCDEYH-EVA 76
+D + ++T + + ++ W P + + RIG G FG V+ ++H +VA
Sbjct: 13 EDRNRMKT-LGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKG----------KWHGDVA 61
Query: 77 VKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRM 136
VK+L+ ++ + L+ I G S ++ I+ ++ EGS
Sbjct: 62 VKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHH 120
Query: 137 AQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXX 196
+ K + + A AQG+ LH+K I+ +LK N L+E +GD
Sbjct: 121 LHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATV 180
Query: 197 XXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG- 255
S + G+ +MAPE + + + P SF++D + F + E++TG P
Sbjct: 181 KSRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 239
Query: 256 RSVDEIYDAVVR---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
+ D+I V R ++ + S P A++ ++ C + RPL IL
Sbjct: 240 NNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 291
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 119/280 (42%), Gaps = 18/280 (6%)
Query: 31 SNDTNAWIKPSA-LKLRHRIGRGPFGEVWLATHYLSTEDCDEYH-EVAVKILHPVKEDRM 88
S+ ++ W P + + RIG G FG V+ ++H +VAVK+L+
Sbjct: 2 SDSSDDWEIPDGQITVGQRIGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQ 51
Query: 89 RVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSN 148
++ + L+ I G S ++ I+ ++ EGS + K +
Sbjct: 52 QLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIK 110
Query: 149 VFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLP 208
+ A AQG+ LH+K I+ +LK N L+E +GD S
Sbjct: 111 LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFE 169
Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVR 267
+ G+ +MAPE + + + P SF++D + F + E++TG P + D+I V R
Sbjct: 170 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 229
Query: 268 ---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
++ + S P A++ ++ C + RPL IL
Sbjct: 230 GYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 269
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 124/291 (42%), Gaps = 19/291 (6%)
Query: 20 DSDHLRTAVATSNDTNAWIKPSA-LKLRHRIGRGPFGEVWLATHYLSTEDCDEYH-EVAV 77
D + ++T + + ++ W P + + RIG G FG V+ ++H +VAV
Sbjct: 7 DRNRMKT-LGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKG----------KWHGDVAV 55
Query: 78 KILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMA 137
K+L+ ++ + L+ I G S ++ I+ ++ EGS
Sbjct: 56 KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHL 114
Query: 138 QLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXX 197
+ K + + A AQG+ LH+K I+ +LK N L+E +GD
Sbjct: 115 HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEK 174
Query: 198 XXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-R 256
S + G+ +MAPE + + + P SF++D + F + E++TG P
Sbjct: 175 SRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 233
Query: 257 SVDEIYDAVVR---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
+ D+I V R ++ + S P A++ ++ C + RPL IL
Sbjct: 234 NRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 284
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 111/263 (42%), Gaps = 17/263 (6%)
Query: 47 HRIGRGPFGEVWLATHYLSTEDCDEYH-EVAVKILHPVKEDRMRVLLERLNDLFLKCQGV 105
RIG G FG V+ ++H +VAVK+L+ ++ + L+
Sbjct: 14 QRIGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 106 EGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS 165
I G S ++ I+ ++ EGS + K + + A AQG+ LH+
Sbjct: 64 VNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 166 KGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPE 225
K I+ +LK N L+E +GD S + G+ +MAPE + +
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQ 181
Query: 226 VRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVR---RQEIPPIPSGLPPA 281
+ P SF++D + F + E++TG P + D+I V R ++ + S P A
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA 241
Query: 282 VENVLLGCFEYDLRSRPLMTDIL 304
++ ++ C + RPL IL
Sbjct: 242 MKRLMAECLKKKRDERPLFPQIL 264
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 111/263 (42%), Gaps = 17/263 (6%)
Query: 47 HRIGRGPFGEVWLATHYLSTEDCDEYH-EVAVKILHPVKEDRMRVLLERLNDLFLKCQGV 105
RIG G FG V+ ++H +VAVK+L+ ++ + L+
Sbjct: 16 QRIGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 65
Query: 106 EGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS 165
I G S ++ I+ ++ EGS + K + + A AQG+ LH+
Sbjct: 66 VNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 124
Query: 166 KGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPE 225
K I+ +LK N L+E +GD S + G+ +MAPE + +
Sbjct: 125 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQ 183
Query: 226 VRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVR---RQEIPPIPSGLPPA 281
+ P SF++D + F + E++TG P + D+I V R ++ + S P A
Sbjct: 184 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA 243
Query: 282 VENVLLGCFEYDLRSRPLMTDIL 304
++ ++ C + RPL IL
Sbjct: 244 MKRLMAECLKKKRDERPLFPQIL 266
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 111/263 (42%), Gaps = 17/263 (6%)
Query: 47 HRIGRGPFGEVWLATHYLSTEDCDEYH-EVAVKILHPVKEDRMRVLLERLNDLFLKCQGV 105
RIG G FG V+ ++H +VAVK+L+ ++ + L+
Sbjct: 14 QRIGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 106 EGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS 165
I G S ++ I+ ++ EGS + K + + A AQG+ LH+
Sbjct: 64 VNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 166 KGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPE 225
K I+ +LK N L+E +GD S + G+ +MAPE + +
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQ 181
Query: 226 VRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVR---RQEIPPIPSGLPPA 281
+ P SF++D + F + E++TG P + D+I V R ++ + S P A
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA 241
Query: 282 VENVLLGCFEYDLRSRPLMTDIL 304
++ ++ C + RPL IL
Sbjct: 242 MKRLMAECLKKKRDERPLFPQIL 264
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 47/288 (16%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
+K +L +G+G FG+V+LA + + A+K L K+D + L D
Sbjct: 15 LKIEDFELHKMLGKGSFGKVFLAEFKKTNQ------FFAIKAL---KKDVV------LMD 59
Query: 98 LFLKCQGVE----GICWLQGISV-------INGKICIIMKFYEGSVGDRMAQLKG-GKLS 145
++C VE + W + +M++ G GD M ++ K
Sbjct: 60 DDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNG--GDLMYHIQSCHKFD 117
Query: 146 LSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSS 205
LS YA ++ G+ LHSKGI+ +LK N +L++ + D ++
Sbjct: 118 LSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN 177
Query: 206 DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV 265
+ GTP+Y+APE + + D W F + EML G P G+ +E++ ++
Sbjct: 178 EF---CGTPDYIAPEIL---LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 231
Query: 266 VRRQEIPPIPSGLPPAVENVLLGCF----------EYDLRSRPLMTDI 303
R + P P L +++L+ F D+R PL +I
Sbjct: 232 --RMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 277
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 111/263 (42%), Gaps = 17/263 (6%)
Query: 47 HRIGRGPFGEVWLATHYLSTEDCDEYH-EVAVKILHPVKEDRMRVLLERLNDLFLKCQGV 105
RIG G FG V+ ++H +VAVK+L+ ++ + L+
Sbjct: 14 QRIGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 106 EGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS 165
I G S ++ I+ ++ EGS + K + + A AQG+ LH+
Sbjct: 64 VNILLFMGYST-APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 166 KGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPE 225
K I+ +LK N L+E +GD S + G+ +MAPE + +
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQ 181
Query: 226 VRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVR---RQEIPPIPSGLPPA 281
+ P SF++D + F + E++TG P + D+I V R ++ + S P A
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA 241
Query: 282 VENVLLGCFEYDLRSRPLMTDIL 304
++ ++ C + RPL IL
Sbjct: 242 MKRLMAECLKKKRDERPLFPQIL 264
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 122/275 (44%), Gaps = 37/275 (13%)
Query: 36 AWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLER 94
AW P ++KL ++G G FGEVW+ + ST+ VAVK L P ++ LE
Sbjct: 6 AWEIPRESIKLVKKLGAGQFGEVWMGYYNNSTK-------VAVKTLKPGTMS-VQAFLEE 57
Query: 95 LNDLFLKCQGVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYA 153
N +K + + L + I II +F +GS+ D + +GGK+ L + ++
Sbjct: 58 AN--LMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFS 115
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
+A+G+ + K + +L+ N +++E+ + D L R +
Sbjct: 116 AQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADF--------------GLARVIED 161
Query: 214 PNYMA------PEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYD 263
Y A P +W PE G + +++ W F + E++T G P GR+ ++
Sbjct: 162 NEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMS 221
Query: 264 AVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
A+ + +P + P + +++ C++ RP
Sbjct: 222 ALSQGYRMPRM-ENCPDELYDIMKMCWKEKAEERP 255
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 117/282 (41%), Gaps = 18/282 (6%)
Query: 29 ATSNDTNAWIKPSA-LKLRHRIGRGPFGEVWLATHYLSTEDCDEYH-EVAVKILHPVKED 86
+ + ++ W P + + RIG G FG V+ ++H +VAVK+L+
Sbjct: 11 GSRDSSDDWEIPDGQITVGQRIGSGSFGTVYKG----------KWHGDVAVKMLNVTAPT 60
Query: 87 RMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSL 146
++ + L+ I G S ++ I+ ++ EGS K +
Sbjct: 61 PQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHASETKFEM 119
Query: 147 SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSD 206
+ A A+G+ LH+K I+ +LK N L+E + +GD S
Sbjct: 120 KKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG-SHQ 178
Query: 207 LPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAV 265
+ G+ +MAPE + + P SF++D + F + E++TG P + D+I + V
Sbjct: 179 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
Query: 266 VR---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
R ++ + S P ++ ++ C + RP IL
Sbjct: 239 GRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRIL 280
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 102/236 (43%), Gaps = 33/236 (13%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP---VKEDRM-------RVLLERLNDL 98
+G+G FG+V LA E D Y AVK+L +++D + R+L N
Sbjct: 31 LGKGSFGKVMLAR---VKETGDLY---AVKVLKKDVILQDDDVECTMTEKRILSLARNHP 84
Query: 99 FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLA 157
FL + C Q ++ +M+F G GD M + K + + YA ++
Sbjct: 85 FL----TQLFCCFQ----TPDRLFFVMEFVNG--GDLMFHIQKSRRFDEARARFYAAEII 134
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 217
++ LH KGI+ +LK N +L+ L D ++ GTP+Y+
Sbjct: 135 SALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATF---CGTPDYI 191
Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP 273
APE Q + GP D W + EML G P + D++++A++ + + P
Sbjct: 192 APEILQEMLYGP---AVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP 244
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 18/279 (6%)
Query: 32 NDTNAWIKPSA-LKLRHRIGRGPFGEVWLATHYLSTEDCDEYH-EVAVKILHPVKEDRMR 89
+ ++ W P + + RIG G FG V+ ++H +VAVK+L+ +
Sbjct: 2 DSSDDWEIPDGQITVGQRIGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQQ 51
Query: 90 VLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNV 149
+ + L+ I G S ++ I+ ++ EGS K + +
Sbjct: 52 LQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHASETKFEMKKL 110
Query: 150 FRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPR 209
A A+G+ LH+K I+ +LK N L+E + +GD S +
Sbjct: 111 IDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSG-SHQFEQ 169
Query: 210 RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVR- 267
G+ +MAPE + + P SF++D + F + E++TG P + D+I + V R
Sbjct: 170 LSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRG 229
Query: 268 --RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
++ + S P ++ ++ C + RP IL
Sbjct: 230 SLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRIL 268
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 118/288 (40%), Gaps = 47/288 (16%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
+K L +G+G FG+V+LA + + A+K L K+D + L D
Sbjct: 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQ------FFAIKAL---KKDVV------LMD 58
Query: 98 LFLKCQGVE----GICWLQGISV-------INGKICIIMKFYEGSVGDRMAQLKG-GKLS 145
++C VE + W + +M++ G GD M ++ K
Sbjct: 59 DDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNG--GDLMYHIQSCHKFD 116
Query: 146 LSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSS 205
LS YA ++ G+ LHSKGI+ +LK N +L++ + D ++
Sbjct: 117 LSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN 176
Query: 206 DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV 265
GTP+Y+APE + + D W F + EML G P G+ +E++ ++
Sbjct: 177 XF---CGTPDYIAPEIL---LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 230
Query: 266 VRRQEIPPIPSGLPPAVENVLLGCF----------EYDLRSRPLMTDI 303
R + P P L +++L+ F D+R PL +I
Sbjct: 231 --RMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 276
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 109/263 (41%), Gaps = 17/263 (6%)
Query: 47 HRIGRGPFGEVWLATHYLSTEDCDEYH-EVAVKILHPVKEDRMRVLLERLNDLFLKCQGV 105
RIG G FG V+ ++H +VAVK+L+ ++ + L+
Sbjct: 30 QRIGSGSFGTVYKG----------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 79
Query: 106 EGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS 165
I G S ++ I+ ++ EGS K + + A A+G+ LH+
Sbjct: 80 VNILLFMGYSTA-PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 166 KGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPE 225
K I+ +LK N L+E + +GD S + G+ +MAPE + +
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQ 197
Query: 226 VRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVR---RQEIPPIPSGLPPA 281
P SF++D + F + E++TG P + D+I + V R ++ + S P
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKR 257
Query: 282 VENVLLGCFEYDLRSRPLMTDIL 304
++ ++ C + RP IL
Sbjct: 258 MKRLMAECLKKKRDERPSFPRIL 280
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 100/232 (43%), Gaps = 39/232 (16%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG- 107
+G+G FG+V L+ + DE + AVKIL K+D + + D ++C VE
Sbjct: 349 LGKGSFGKVMLS----ERKGTDELY--AVKIL---KKDVV------IQDDDVECTMVEKR 393
Query: 108 ----------ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDL 156
+ L ++ +M++ G GD M ++ G+ + YA ++
Sbjct: 394 VLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNG--GDLMYHIQQVGRFKEPHAVFYAAEI 451
Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNY 216
A G+ L SKGI+ +LK N +L+ + D + GTP+Y
Sbjct: 452 AIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXF---CGTPDY 508
Query: 217 MAPE--QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVV 266
+APE +QP + D W F + EML G P G DE++ +++
Sbjct: 509 IAPEIIAYQPYGKS-----VDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM 555
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 106/257 (41%), Gaps = 39/257 (15%)
Query: 31 SNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRV 90
+N +K + +G+G FG+V L+ + DE + AVKIL K+D +
Sbjct: 10 NNGNRDRMKLTDFNFLMVLGKGSFGKVMLSER----KGTDELY--AVKIL---KKDVV-- 58
Query: 91 LLERLNDLFLKCQGVEG-----------ICWLQGISVINGKICIIMKFYEGSVGDRMAQL 139
+ D ++C VE + L ++ +M++ G GD M +
Sbjct: 59 ----IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNG--GDLMYHI 112
Query: 140 KG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 198
+ G+ + YA ++A G+ L SKGI+ +LK N +L+ + D
Sbjct: 113 QQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172
Query: 199 XXXXXSSDLPRRLGTPNYMAPE--QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR 256
+ GTP+Y+APE +QP + D W F + EML G P G
Sbjct: 173 WDGVTTKXF---CGTPDYIAPEIIAYQPYGKS-----VDWWAFGVLLYEMLAGQAPFEGE 224
Query: 257 SVDEIYDAVVRRQEIPP 273
DE++ +++ P
Sbjct: 225 DEDELFQSIMEHNVAYP 241
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 122/280 (43%), Gaps = 37/280 (13%)
Query: 41 SALKLRHRIGRGPFGEVWLATHYLSTE--------DCDEYHEVAVKILHPVKEDRMRVLL 92
+ L L IG G FG+V+ A ++ E D DE +++ I + +E ++ +L
Sbjct: 7 AELTLEEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDE--DISQTIENVRQEAKLFAML 63
Query: 93 ERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRY 152
+ N I L+G+ + +C++M+F G +R+ L G ++ + +
Sbjct: 64 KHPN-----------IIALRGVCLKEPNLCLVMEFARGGPLNRV--LSGKRIPPDILVNW 110
Query: 153 AIDLAQGILQLHSKGILVL---NLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPR 209
A+ +A+G+ LH + I+ + +LK N ++ + + GD+ + + R
Sbjct: 111 AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQ--KVENGDLSNKILKITDFGLAREWHR 168
Query: 210 RL-----GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDA 264
G +MAPE + + S +D W + + E+LTG P G +
Sbjct: 169 TTKMSAAGAYAWMAPEVIRASM---FSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYG 225
Query: 265 VVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
V + PIPS P ++ C+ D SRP T+IL
Sbjct: 226 VAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNIL 265
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 102/244 (41%), Gaps = 39/244 (15%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
+K + +G+G FG+V LA TE+ A+KIL K+D + + D
Sbjct: 16 VKLTDFNFLMVLGKGSFGKVMLADRK-GTEEL-----YAIKIL---KKDVV------IQD 60
Query: 98 LFLKCQGVEG-----------ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLS 145
++C VE + L ++ +M++ G GD M ++ GK
Sbjct: 61 DDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNG--GDLMYHIQQVGKFK 118
Query: 146 LSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSS 205
YA +++ G+ LH +GI+ +LK N +L+ + D +
Sbjct: 119 EPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTR 178
Query: 206 DLPRRLGTPNYMAPE--QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYD 263
+ GTP+Y+APE +QP + D W + + EML G P G DE++
Sbjct: 179 EF---CGTPDYIAPEIIAYQPYGKS-----VDWWAYGVLLYEMLAGQPPFDGEDEDELFQ 230
Query: 264 AVVR 267
+++
Sbjct: 231 SIME 234
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 189
GS+ DR+ + +G L L + RYA+ +A+G+ L SK + +L N +L D +G
Sbjct: 95 GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 153
Query: 190 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT- 248
D R + APE + S +D+W F ++ EM T
Sbjct: 154 DFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLWEMFTY 210
Query: 249 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
G +P G + +I + + E P P P + NV++ C+ + RP
Sbjct: 211 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 189
GS+ DR+ + +G L L + RYA+ +A+G+ L SK + +L N +L D +G
Sbjct: 99 GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 157
Query: 190 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT- 248
D R + APE + S +D+W F ++ EM T
Sbjct: 158 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLWEMFTY 214
Query: 249 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
G +P G + +I + + E P P P + NV++ C+ + RP
Sbjct: 215 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 264
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 189
GS+ DR+ + +G L L + RYA+ +A+G+ L SK + +L N +L D +G
Sbjct: 105 GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 163
Query: 190 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT- 248
D R + APE + S +D+W F ++ EM T
Sbjct: 164 DFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLWEMFTY 220
Query: 249 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
G +P G + +I + + E P P P + NV++ C+ + RP
Sbjct: 221 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 270
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 189
GS+ DR+ + +G L L + RYA+ +A+G+ L SK + +L N +L D +G
Sbjct: 95 GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 153
Query: 190 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT- 248
D R + APE + S +D+W F ++ EM T
Sbjct: 154 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLWEMFTY 210
Query: 249 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
G +P G + +I + + E P P P + NV++ C+ + RP
Sbjct: 211 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 189
GS+ DR+ + +G L L + RYA+ +A+G+ L SK + +L N +L D +G
Sbjct: 99 GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 157
Query: 190 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT- 248
D R + APE + S +D+W F ++ EM T
Sbjct: 158 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLWEMFTY 214
Query: 249 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
G +P G + +I + + E P P P + NV++ C+ + RP
Sbjct: 215 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 264
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 189
GS+ DR+ + +G L L + RYA+ +A+G+ L SK + +L N +L D +G
Sbjct: 105 GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 163
Query: 190 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT- 248
D R + APE + S +D+W F ++ EM T
Sbjct: 164 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLWEMFTY 220
Query: 249 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
G +P G + +I + + E P P P + NV++ C+ + RP
Sbjct: 221 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 270
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 189
GS+ DR+ + +G L L + RYA+ +A+G+ L SK + +L N +L D +G
Sbjct: 95 GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 153
Query: 190 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT- 248
D R + APE + S +D+W F ++ EM T
Sbjct: 154 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLWEMFTY 210
Query: 249 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
G +P G + +I + + E P P P + NV++ C+ + RP
Sbjct: 211 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 108/285 (37%), Gaps = 24/285 (8%)
Query: 37 WIKPSALKLRHRIGR----GPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKED---RM 88
PS L R+ +G G EV LA D ++ +VAVK+L + D +
Sbjct: 4 MTTPSHLSDRYELGEILGFGGMSEVHLA------RDLRDHRDVAVKVLRADLARDPSFYL 57
Query: 89 RVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSN 148
R E N L + + G + I+ Y V R G ++
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 117
Query: 149 VFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLP 208
D Q + H GI+ ++KP N +++ + + D +
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR 268
+GT Y++PEQ + + + +D + C + E+LTG P G S D + VR
Sbjct: 178 AVIGTAQYLSPEQARGDS---VDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVRE 234
Query: 269 QEIPPIP--SGLPPAVENVLLGCFEYDLRSR-----PLMTDILRV 306
IPP GL ++ V+L + +R + D++RV
Sbjct: 235 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 117/277 (42%), Gaps = 32/277 (11%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYH--EVAVKILHPVKEDRMRVLLERLNDLFL 100
L ++ +IG G FG V A E+H +VAVKIL +++D ER+N+
Sbjct: 39 LNIKEKIGAGSFGTVHRA----------EWHGSDVAVKIL--MEQD---FHAERVNEFLR 83
Query: 101 KCQGVE-----GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR--YA 153
+ ++ I G + I+ ++ R+ G + L R A
Sbjct: 84 EVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMA 143
Query: 154 IDLAQGILQLHSKG--ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
D+A+G+ LH++ I+ NLK N ++++ + D S
Sbjct: 144 YDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSA---A 200
Query: 212 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 271
GTP +MAPE + E P + ++D + F + E+ T QP + ++ AV + +
Sbjct: 201 GTPEWMAPEVLRDE---PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR 257
Query: 272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
IP L P V ++ GC+ + RP I+ + +
Sbjct: 258 LEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLR 294
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 114/274 (41%), Gaps = 22/274 (8%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--PVKEDRMRVLLERLNDLFL 100
++ +IGRG F EV+ A L VA+K + + + + R + DL
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGV------PVALKKVQIFDLMDAKARADCIKEIDLLK 87
Query: 101 KCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGK--LSLSNVFRYAIDLA 157
+ I + + + ++ I+++ + G + + K K + V++Y + L
Sbjct: 88 QLNHPNVIKYYASF-IEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLC 146
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 217
+ +HS+ ++ ++KP N + LGD+ + L +GTP YM
Sbjct: 147 SALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL---VGTPYYM 203
Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV--VRRQEIPPIP 275
+PE+ +F++D W C + EM P G ++ +Y + + + PP+P
Sbjct: 204 SPERIH---ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLCKKIEQCDYPPLP 259
Query: 276 SG-LPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
S + ++ C D RP +T + V K
Sbjct: 260 SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAK 293
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 111/268 (41%), Gaps = 36/268 (13%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
RIG+G FGEV+ D VA+KI+ + + +++ + +C
Sbjct: 26 RIGKGSFGEVYKGI------DNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-PY 78
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG 167
I G + + K+ IIM++ G G + LK G L + + ++ +G+ LHS+
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGG--GSALDLLKPGPLEETYIATILREILKGLDYLHSER 136
Query: 168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR--LGTPNYMAPEQWQPE 225
+ ++K N +L+E GDV + + R +GTP +MAPE +
Sbjct: 137 KIHRDIKAANVLLSEQ-----GDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIK-- 189
Query: 226 VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE-- 283
+ F+ D W + IE+ G P +++ V + IP PP +E
Sbjct: 190 -QSAYDFKADIWSLGITAIELAKGEPPNS-----DLHPMRV----LFLIPKNSPPTLEGQ 239
Query: 284 ------NVLLGCFEYDLRSRPLMTDILR 305
+ C D R RP ++L+
Sbjct: 240 HSKPFKEFVEACLNKDPRFRPTAKELLK 267
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 98/245 (40%), Gaps = 25/245 (10%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-------MRV 90
I+P +L +G+G +G+V+ + +K V+ + R
Sbjct: 14 IRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERN 73
Query: 91 LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNV 149
+LE + F+ V+ I Q GK+ +I+++ G G+ QL + G
Sbjct: 74 ILEEVKHPFI----VDLIYAFQ----TGGKLYLILEYLSG--GELFMQLEREGIFMEDTA 123
Query: 150 FRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPR 209
Y +++ + LH KGI+ +LKP N +LN L D +
Sbjct: 124 CFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTF-- 181
Query: 210 RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR-R 268
GT YMAPE +R + D W + +MLTG P G + + D +++ +
Sbjct: 182 -CGTIEYMAPEIL---MRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK 237
Query: 269 QEIPP 273
+PP
Sbjct: 238 LNLPP 242
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 98/245 (40%), Gaps = 25/245 (10%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR-------MRV 90
I+P +L +G+G +G+V+ + +K V+ + R
Sbjct: 14 IRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERN 73
Query: 91 LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNV 149
+LE + F+ V+ I Q GK+ +I+++ G G+ QL + G
Sbjct: 74 ILEEVKHPFI----VDLIYAFQ----TGGKLYLILEYLSG--GELFMQLEREGIFMEDTA 123
Query: 150 FRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPR 209
Y +++ + LH KGI+ +LKP N +LN L D +
Sbjct: 124 CFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXF-- 181
Query: 210 RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR-R 268
GT YMAPE +R + D W + +MLTG P G + + D +++ +
Sbjct: 182 -CGTIEYMAPEIL---MRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK 237
Query: 269 QEIPP 273
+PP
Sbjct: 238 LNLPP 242
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 19/209 (9%)
Query: 47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP---VKEDRMRVLLERLNDLFLKCQ 103
+++G G FG V+ +T VAVK L + + ++ ++ + KCQ
Sbjct: 37 NKMGEGGFGVVYKGYVNNTT--------VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ 88
Query: 104 GVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGK-LSLSNVFRYAIDLAQGIL 161
E + L G S +C++ + GS+ DR++ L G LS + A A GI
Sbjct: 89 H-ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGIN 147
Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
LH + ++K N +L+EA A + D R +GT YMAPE
Sbjct: 148 FLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM-XSRIVGTTAYMAPEA 206
Query: 222 WQPEVRGPISFETDSWGFACSIIEMLTGV 250
+RG I+ ++D + F ++E++TG+
Sbjct: 207 ----LRGEITPKSDIYSFGVVLLEIITGL 231
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
+IG G G V +AT S + VAVK + K+ R +L + + ++ E
Sbjct: 158 KIGEGSTGIVCIATVRSSGK------LVAVKKMDLRKQQRRELLFNEV--VIMRDYQHEN 209
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG 167
+ + ++ ++ ++M+F EG G + +++ + + + Q + LH++G
Sbjct: 210 VVEMYNSYLVGDELWVVMEFLEG--GALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG 267
Query: 168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQP 224
++ ++K + +L R L D S ++PRR +GTP +MAPE
Sbjct: 268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQV------SKEVPRRKXLVGTPYWMAPELIS- 320
Query: 225 EVRGPISFETDSWGFACSIIEMLTGVQP 252
R P E D W +IEM+ G P
Sbjct: 321 --RLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 127/313 (40%), Gaps = 53/313 (16%)
Query: 26 TAVATSNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHP 82
T S + + W ++ + + ++H++G G +GEV+ + Y T VAVK L
Sbjct: 204 TIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL-- 253
Query: 83 VKEDRMRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDR 135
KED M V + FLK V + L G+ II +F G++ D
Sbjct: 254 -KEDTMEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 306
Query: 136 MAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXX 195
+ + ++S + A ++ + L K + NL N ++ E + D
Sbjct: 307 LRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADF---- 362
Query: 196 XXXXXXXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEM 246
L R + Y A P +W PE S ++D W F + E+
Sbjct: 363 ----------GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 412
Query: 247 LT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
T G+ P G + ++Y+ + + + P G P V ++ C++++ RP +I +
Sbjct: 413 ATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 471
Query: 306 VFKSS-QNSVHSD 317
F++ Q S SD
Sbjct: 472 AFETMFQESSISD 484
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 104/238 (43%), Gaps = 26/238 (10%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRV-LLERLND--LF 99
++ +G G FG V H + + Y+ A+K+L KE +R+ +E ND L
Sbjct: 8 FQILRTLGTGSFGRV----HLIRSRHNGRYY--AMKVLK--KEIVVRLKQVEHTNDERLM 59
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR-YAIDLAQ 158
L I + G +I +IM + EG G+ + L+ + + V + YA ++
Sbjct: 60 LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEG--GELFSLLRKSQRFPNPVAKFYAAEVCL 117
Query: 159 GILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL-GTPNYM 217
+ LHSK I+ +LKP N +L++ + D D+ L GTP+Y+
Sbjct: 118 ALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYV-------PDVTYXLCGTPDYI 170
Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-EIPPI 274
APE + P + D W F I EML G P + + Y+ ++ + PP
Sbjct: 171 APEVVSTK---PYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPF 225
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
+IG G G V +AT S + VAVK + K+ R +L + + ++ E
Sbjct: 38 KIGEGSTGIVCIATVRSSGK------LVAVKKMDLRKQQRRELLFNEV--VIMRDYQHEN 89
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG 167
+ + ++ ++ ++M+F EG G + +++ + + + Q + LH++G
Sbjct: 90 VVEMYNSYLVGDELWVVMEFLEG--GALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG 147
Query: 168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQP 224
++ ++K + +L R L D S ++PRR +GTP +MAPE
Sbjct: 148 VIHRDIKSDSILLTHDGRVKLSDFGFCAQV------SKEVPRRKXLVGTPYWMAPELIS- 200
Query: 225 EVRGPISFETDSWGFACSIIEMLTGVQP 252
R P E D W +IEM+ G P
Sbjct: 201 --RLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 19/209 (9%)
Query: 47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP---VKEDRMRVLLERLNDLFLKCQ 103
+++G G FG V+ +T VAVK L + + ++ ++ + KCQ
Sbjct: 37 NKMGEGGFGVVYKGYVNNTT--------VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ 88
Query: 104 GVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGK-LSLSNVFRYAIDLAQGIL 161
E + L G S +C++ + GS+ DR++ L G LS + A A GI
Sbjct: 89 H-ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGIN 147
Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
LH + ++K N +L+EA A + D R +GT YMAPE
Sbjct: 148 FLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM-XXRIVGTTAYMAPEA 206
Query: 222 WQPEVRGPISFETDSWGFACSIIEMLTGV 250
+RG I+ ++D + F ++E++TG+
Sbjct: 207 ----LRGEITPKSDIYSFGVVLLEIITGL 231
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 114/271 (42%), Gaps = 28/271 (10%)
Query: 35 NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
+ W P +L+L R+G G FGEVW+ T +T +VA+K L P L E
Sbjct: 2 DVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNT-------KVAIKTLKPGTMSPESFLEE 54
Query: 94 RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVFR 151
LK + +Q +V++ + I+ Y +GS+ D + +G L L N+
Sbjct: 55 AQIMKKLKHDKL-----VQLYAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVD 109
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
A +A G+ + + +L+ N ++ + D ++ R
Sbjct: 110 MAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADF-----GLARLIEDNEXTARQ 164
Query: 212 GTP---NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR 267
G + APE + G + ++D W F + E++T G P G + E+ + V R
Sbjct: 165 GAKFPIKWTAPEA---ALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVER 221
Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
+ P P P ++ +++ C++ D RP
Sbjct: 222 GYRM-PCPQDCPISLHELMIHCWKKDPEERP 251
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
+IG G G V +AT S + VAVK + K+ R +L + + ++ E
Sbjct: 31 KIGEGSTGIVCIATVRSSGK------LVAVKKMDLRKQQRRELLFNEV--VIMRDYQHEN 82
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG 167
+ + ++ ++ ++M+F EG G + +++ + + + Q + LH++G
Sbjct: 83 VVEMYNSYLVGDELWVVMEFLEG--GALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG 140
Query: 168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQP 224
++ ++K + +L R L D S ++PRR +GTP +MAPE
Sbjct: 141 VIHRDIKSDSILLTHDGRVKLSDFGFCAQV------SKEVPRRKXLVGTPYWMAPELIS- 193
Query: 225 EVRGPISFETDSWGFACSIIEMLTGVQP 252
R P E D W +IEM+ G P
Sbjct: 194 --RLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
+IG G G V +AT S + VAVK + K+ R +L + + ++ E
Sbjct: 27 KIGEGSTGIVCIATVRSSGK------LVAVKKMDLRKQQRRELLFNEV--VIMRDYQHEN 78
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG 167
+ + ++ ++ ++M+F EG G + +++ + + + Q + LH++G
Sbjct: 79 VVEMYNSYLVGDELWVVMEFLEG--GALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG 136
Query: 168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQP 224
++ ++K + +L R L D S ++PRR +GTP +MAPE
Sbjct: 137 VIHRDIKSDSILLTHDGRVKLSDFGFCAQV------SKEVPRRKXLVGTPYWMAPELIS- 189
Query: 225 EVRGPISFETDSWGFACSIIEMLTGVQP 252
R P E D W +IEM+ G P
Sbjct: 190 --RLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 95/209 (45%), Gaps = 24/209 (11%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
+IG G G V +AT S + VAVK + K+ R +L + + ++ E
Sbjct: 36 KIGEGSTGIVCIATVRSSGK------LVAVKKMDLRKQQRRELLFNEV--VIMRDYQHEN 87
Query: 108 ICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
+ + ++ ++ ++M+F EG ++ D + + + ++ V + + Q + LH++
Sbjct: 88 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAV---CLAVLQALSVLHAQ 144
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQ 223
G++ ++K + +L R L D S ++PRR +GTP +MAPE
Sbjct: 145 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQV------SKEVPRRKXLVGTPYWMAPELIS 198
Query: 224 PEVRGPISFETDSWGFACSIIEMLTGVQP 252
R P E D W +IEM+ G P
Sbjct: 199 ---RLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 19/209 (9%)
Query: 47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP---VKEDRMRVLLERLNDLFLKCQ 103
+++G G FG V+ Y++ VAVK L + + ++ ++ + KCQ
Sbjct: 31 NKMGEGGFGVVYKG--YVNNT------TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ 82
Query: 104 GVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGK-LSLSNVFRYAIDLAQGIL 161
E + L G S +C++ + GS+ DR++ L G LS + A A GI
Sbjct: 83 H-ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGIN 141
Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
LH + ++K N +L+EA A + D R +GT YMAPE
Sbjct: 142 FLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVM-XXRIVGTTAYMAPEA 200
Query: 222 WQPEVRGPISFETDSWGFACSIIEMLTGV 250
+RG I+ ++D + F ++E++TG+
Sbjct: 201 ----LRGEITPKSDIYSFGVVLLEIITGL 225
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
+IG G G V +AT S + VAVK + K+ R +L + + ++ E
Sbjct: 81 KIGEGSTGIVCIATVRSSGK------LVAVKKMDLRKQQRRELLFNEV--VIMRDYQHEN 132
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG 167
+ + ++ ++ ++M+F EG G + +++ + + + Q + LH++G
Sbjct: 133 VVEMYNSYLVGDELWVVMEFLEG--GALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG 190
Query: 168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQP 224
++ ++K + +L R L D S ++PRR +GTP +MAPE
Sbjct: 191 VIHRDIKSDSILLTHDGRVKLSDFGFCAQV------SKEVPRRKXLVGTPYWMAPELIS- 243
Query: 225 EVRGPISFETDSWGFACSIIEMLTGVQP 252
R P E D W +IEM+ G P
Sbjct: 244 --RLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 104/230 (45%), Gaps = 27/230 (11%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
+IG G G V LA S +VAVK++ K+ R +L + + ++
Sbjct: 52 KIGEGSTGIVCLAREKHSG------RQVAVKMMDLRKQQRRELLFNEV--VIMRDYQHFN 103
Query: 108 ICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
+ + ++ ++ ++M+F +G ++ D ++Q++ + ++ V + Q + LH++
Sbjct: 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVL---QALAYLHAQ 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQ 223
G++ ++K + +L R L D S D+P+R +GTP +MAPE
Sbjct: 161 GVIHRDIKSDSILLTLDGRVKLSDFGFCAQI------SKDVPKRKXLVGTPYWMAPEVIS 214
Query: 224 PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP 273
R + E D W +IEM+ G P D A+ R ++ PP
Sbjct: 215 ---RSLYATEVDIWSLGIMVIEMVDGEPPYFS---DSPVQAMKRLRDSPP 258
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 107/285 (37%), Gaps = 24/285 (8%)
Query: 37 WIKPSALKLRHRIGR----GPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKED---RM 88
PS L R+ +G G EV LA D ++ +VAVK+L + D +
Sbjct: 4 MTTPSHLSDRYELGEILGFGGMSEVHLA------RDLRDHRDVAVKVLRADLARDPSFYL 57
Query: 89 RVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSN 148
R E N L + + G + I+ Y V R G ++
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 117
Query: 149 VFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLP 208
D Q + H GI+ ++KP N +++ + + D +
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR 268
+GT Y++PEQ + + + +D + C + E+LTG P G S + VR
Sbjct: 178 AVIGTAQYLSPEQARGDS---VDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 269 QEIPPIP--SGLPPAVENVLLGCFEYDLRSR-----PLMTDILRV 306
IPP GL ++ V+L + +R + D++RV
Sbjct: 235 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 119/277 (42%), Gaps = 32/277 (11%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYH--EVAVKILHPVKEDRMRVLLERLNDLFL 100
L ++ +IG G FG V A E+H +VAVKIL +++D ER+N+
Sbjct: 39 LNIKEKIGAGSFGTVHRA----------EWHGSDVAVKIL--MEQD---FHAERVNEFLR 83
Query: 101 KCQGVE-----GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR--YA 153
+ ++ I G + I+ ++ R+ G + L R A
Sbjct: 84 EVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMA 143
Query: 154 IDLAQGILQLHSKG--ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
D+A+G+ LH++ I+ +LK N ++++ + D S
Sbjct: 144 YDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSK---XAA 200
Query: 212 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 271
GTP +MAPE + E P + ++D + F + E+ T QP + ++ AV + +
Sbjct: 201 GTPEWMAPEVLRDE---PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR 257
Query: 272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
IP L P V ++ GC+ + RP I+ + +
Sbjct: 258 LEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLR 294
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
IG G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 49 IGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G GD + L+ G+ S + YA + LHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPG--GDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 270 RNLLQVDLTKR 280
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
IG G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 49 IGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G GD + L+ G+ S + YA + LHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPG--GDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 270 RNLLQVDLTKR 280
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 122/298 (40%), Gaps = 40/298 (13%)
Query: 26 TAVATSNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHP 82
T S + + W ++ + + ++H++G G +GEV+ + Y T VAVK L
Sbjct: 243 TVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL-- 292
Query: 83 VKEDRMRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDR 135
KED M V + FLK V + L G+ II +F G++ D
Sbjct: 293 -KEDTMEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 345
Query: 136 MAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXX 195
+ + +++ + A ++ + L K + NL N ++ E + D
Sbjct: 346 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSR 405
Query: 196 XXXXXXXXS---SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQ 251
+ + P + P +A ++ S ++D W F + E+ T G+
Sbjct: 406 LMTGDTYTAHAGAKFPIKWTAPESLAYNKF--------SIKSDVWAFGVLLWEIATYGMS 457
Query: 252 PRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
P G + ++Y+ + + + P G P V ++ C++++ RP +I + F++
Sbjct: 458 PYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 514
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
+IG G G V +AT + + +VAVK + K+ R +L + + ++ +
Sbjct: 52 KIGEGSTGIVCIATEKHTGK------QVAVKKMDLRKQQRRELLFNEV--VIMRDYHHDN 103
Query: 108 ICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
+ + ++ ++ ++M+F EG ++ D + + + ++ V + + + + LH++
Sbjct: 104 VVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATV---CLSVLRALSYLHNQ 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQ 223
G++ ++K + +L R L D S ++P+R +GTP +MAPE
Sbjct: 161 GVIHRDIKSDSILLTSDGRIKLSDFGFCAQV------SKEVPKRKXLVGTPYWMAPEVIS 214
Query: 224 PEVRGPISFETDSWGFACSIIEMLTGVQP 252
R P E D W +IEM+ G P
Sbjct: 215 ---RLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 127/313 (40%), Gaps = 53/313 (16%)
Query: 26 TAVATSNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHP 82
T S + + W ++ + + ++H++G G +GEV+ + Y T VAVK L
Sbjct: 201 TVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL-- 250
Query: 83 VKEDRMRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDR 135
KED M V + FLK V + L G+ II +F G++ D
Sbjct: 251 -KEDTMEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 303
Query: 136 MAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXX 195
+ + +++ + A ++ + L K + NL N ++ E + D
Sbjct: 304 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADF---- 359
Query: 196 XXXXXXXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEM 246
L R + Y A P +W PE S ++D W F + E+
Sbjct: 360 ----------GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 409
Query: 247 LT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
T G+ P G + ++Y+ + + + P G P V ++ C++++ RP +I +
Sbjct: 410 ATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 468
Query: 306 VFKSS-QNSVHSD 317
F++ Q S SD
Sbjct: 469 AFETMFQESSISD 481
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 8/153 (5%)
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
Y + G LH ++ +LK N LNE +GD L
Sbjct: 122 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL---C 178
Query: 212 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 271
GTPNY+APE + SFE D W C + +L G P + E Y + + +
Sbjct: 179 GTPNYIAPEVLSKKGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY- 234
Query: 272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
IP + P +++ + D +RP + ++L
Sbjct: 235 -SIPKHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 8/153 (5%)
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
Y + G LH ++ +LK N LNE +GD L
Sbjct: 122 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL---C 178
Query: 212 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 271
GTPNY+APE + SFE D W C + +L G P + E Y + + +
Sbjct: 179 GTPNYIAPEVLSKKGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY- 234
Query: 272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
IP + P +++ + D +RP + ++L
Sbjct: 235 -SIPKHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 8/153 (5%)
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
Y + G LH ++ +LK N LNE +GD L
Sbjct: 126 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL---C 182
Query: 212 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 271
GTPNY+APE + SFE D W C + +L G P + E Y + + +
Sbjct: 183 GTPNYIAPEVLSKKGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY- 238
Query: 272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
IP + P +++ + D +RP + ++L
Sbjct: 239 -SIPKHINPVAASLIQKMLQTDPTARPTINELL 270
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 106/285 (37%), Gaps = 24/285 (8%)
Query: 37 WIKPSALKLRHRIGR----GPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKED---RM 88
PS L R+ +G G EV LA D ++ +VAVK+L + D +
Sbjct: 4 MTTPSHLSDRYELGEILGFGGMSEVHLA------RDLRDHRDVAVKVLRADLARDPSFYL 57
Query: 89 RVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSN 148
R E N L + + G + I+ Y V R G ++
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 117
Query: 149 VFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLP 208
D Q + H GI+ ++KP N +++ + + D
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTA 177
Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR 268
+GT Y++PEQ + + + +D + C + E+LTG P G S + VR
Sbjct: 178 AVIGTAQYLSPEQARGD---SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 269 QEIPPIP--SGLPPAVENVLLGCFEYDLRSR-----PLMTDILRV 306
IPP GL ++ V+L + +R + D++RV
Sbjct: 235 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 129/309 (41%), Gaps = 35/309 (11%)
Query: 5 VAAGQPADFEYEVFDDSDHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYL 64
V+ + D+ E+ D+ D + ++ D I+ ++L IG G FG+V Y+
Sbjct: 359 VSVSETDDYA-EIIDEEDTY--TMPSTRDYE--IQRERIELGRCIGEGQFGDVHQGI-YM 412
Query: 65 STEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN-GKICI 123
S E+ VA+K D +R E+ L + + ++ I VI + I
Sbjct: 413 SPEN--PAMAVAIKTCKNCTSDSVR---EKFLQEALTMRQFDHPHIVKLIGVITENPVWI 467
Query: 124 IMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 183
IM+ Q++ L L+++ YA L+ + L SK + ++ N +++
Sbjct: 468 IMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSAT 527
Query: 184 DRAVLGDVXXXXXXXXXXXXSSD---LPRRLGTPNYMAPEQWQPEVRGPISFE-----TD 235
D LGD + LP + +MAPE I+F +D
Sbjct: 528 DCVKLGDFGLSRYMEDSTYYKASKGKLPIK-----WMAPES--------INFRRFTSASD 574
Query: 236 SWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDL 294
W F + E+L GV+P G +++ + + +P +P PP + +++ C+ YD
Sbjct: 575 VWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDP 633
Query: 295 RSRPLMTDI 303
RP T++
Sbjct: 634 SRRPRFTEL 642
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 41/286 (14%)
Query: 35 NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
+AW P +L+L ++G+G FGEVW+ T +T VA+K L P L E
Sbjct: 178 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGNMSPEAFLQE 230
Query: 94 RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVFR 151
L+ + + +Q +V++ + I+ Y +GS+ D + G L L +
Sbjct: 231 AQVMKKLRHEKL-----VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 285
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
A +A G+ + + +L+ N ++ E + D L R +
Sbjct: 286 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF--------------GLGRLI 331
Query: 212 GTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEI 261
Y A P +W PE + G + ++D W F + E+ T G P G E+
Sbjct: 332 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 391
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
D V R + P P P ++ +++ C+ D RP + L+ F
Sbjct: 392 LDQVERGYRM-PCPPECPESLHDLMCQCWRKDPEERPTF-EYLQAF 435
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 106/285 (37%), Gaps = 24/285 (8%)
Query: 37 WIKPSALKLRHRIGR----GPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKED---RM 88
PS L R+ +G G EV LA D + +VAVK+L + D +
Sbjct: 4 MTTPSHLSDRYELGEILGFGGMSEVHLA------RDLRLHRDVAVKVLRADLARDPSFYL 57
Query: 89 RVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSN 148
R E N L + + G + I+ Y V R G ++
Sbjct: 58 RFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 117
Query: 149 VFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLP 208
D Q + H GI+ ++KP N +++ + + D +
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR 268
+GT Y++PEQ + + + +D + C + E+LTG P G S + VR
Sbjct: 178 AVIGTAQYLSPEQARGD---SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 269 QEIPPIP--SGLPPAVENVLLGCFEYDLRSR-----PLMTDILRV 306
IPP GL ++ V+L + +R + D++RV
Sbjct: 235 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 115/276 (41%), Gaps = 30/276 (10%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
I+ ++L IG G FG+V Y+S E+ VA+K D +R E+
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGI-YMSPEN--PAMAVAIKTCKNCTSDSVR---EKFLQ 60
Query: 98 LFLKCQGVEGICWLQGISVIN-GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDL 156
L + + ++ I VI + IIM+ Q++ L L+++ YA L
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQL 120
Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSD---LPRRLGT 213
+ + L SK + ++ N +++ D LGD + LP +
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK--- 177
Query: 214 PNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR 267
+MAPE I+F +D W F + E+L GV+P G +++ +
Sbjct: 178 --WMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 227
Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
+ +P +P PP + +++ C+ YD RP T++
Sbjct: 228 GERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 109/270 (40%), Gaps = 26/270 (9%)
Query: 35 NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
+AW P +L+L ++G+G FGEVW+ T +T VA+K L P L E
Sbjct: 11 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 63
Query: 94 RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRY 152
+K E + L + V I I+M++ +G + D + G L L +
Sbjct: 64 ---AQVMKKLRHEKLVQLYAV-VSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDM 119
Query: 153 AIDLAQGILQLHSKGILVLNLKPFNFILNE---ADRAVLGDVXXXXXXXXXXXXSSDLPR 209
A +A G+ + + +L+ N ++ E A G + P
Sbjct: 120 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 210 RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR 268
+ + APE + G + ++D W F + E+ T G P G E+ D V R
Sbjct: 180 K-----WTAPEA---ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 231
Query: 269 QEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
+ P P P ++ +++ C+ D RP
Sbjct: 232 YRM-PCPPECPESLHDLMCQCWRKDPEERP 260
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 69/170 (40%), Gaps = 14/170 (8%)
Query: 147 SNVFRYAIDLAQGILQLHSKGILV----LNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 202
S ++A+D+A+G+ LH+ L+ LN + + R + DV
Sbjct: 111 SQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKF--------- 161
Query: 203 XSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIY 262
S P R+ P ++APE Q + D W FA + E++T P S EI
Sbjct: 162 -SFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIG 220
Query: 263 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN 312
V P IP G+ P V ++ C D RP I+ + + Q+
Sbjct: 221 MKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 111/271 (40%), Gaps = 28/271 (10%)
Query: 35 NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
+AW P +L+L ++G+G FGEVW+ T +T VA+K L P L E
Sbjct: 11 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 63
Query: 94 RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVFR 151
L+ + + +Q +V++ + I+ Y +GS+ D + G L L +
Sbjct: 64 AQVMKKLRHEKL-----VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNE---ADRAVLGDVXXXXXXXXXXXXSSDLP 208
A +A G+ + + +L+ N ++ E A G + P
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR 267
+ + APE + G + ++D W F + E+ T G P G E+ D V R
Sbjct: 179 IK-----WTAPEA---ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
+ P P P ++ +++ C+ D RP
Sbjct: 231 GYRM-PCPPECPESLHDLMCQCWRKDPEERP 260
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 111/282 (39%), Gaps = 30/282 (10%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
I PS + + IG G FGEV+ L T + VA+K L ++ RV
Sbjct: 41 IHPSCVTRQKVIGAGEFGEVYKGM--LKTSSGKKEVPVAIKTLKAGYTEKQRVD------ 92
Query: 98 LFLKCQGVEG------ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR 151
FL G+ G I L+G+ + II ++ E D+ + K G+ S+ +
Sbjct: 93 -FLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVG 151
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD-----VXXXXXXXXXXXXSSD 206
+A G+ L + + +L N ++N + D V
Sbjct: 152 MLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGK 211
Query: 207 LPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAV 265
+P R P ++ ++ + +D W F + E++T G +P S E+ A+
Sbjct: 212 IPIRWTAPEAISYRKF--------TSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI 263
Query: 266 VRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
+P P P A+ +++ C++ + RP DI+ +
Sbjct: 264 NDGFRLP-TPMDCPSAIYQLMMQCWQQERARRPKFADIVSIL 304
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 105/269 (39%), Gaps = 24/269 (8%)
Query: 35 NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
+AW P +L+L ++G+G FGEVW+ T +T VA+K L P L E
Sbjct: 11 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 63
Query: 94 RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
+K E + L + +I +GS+ D + G L L + A
Sbjct: 64 ---AQVMKKLRHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMA 120
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNE---ADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
+A G+ + + +L+ N ++ E A G + P +
Sbjct: 121 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 180
Query: 211 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQ 269
+ APE + G + ++D W F + E+ T G P G E+ D V R
Sbjct: 181 -----WTAPEA---ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 232
Query: 270 EIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
+ P P P ++ +++ C+ D RP
Sbjct: 233 RM-PCPPECPESLHDLMCQCWRKDPEERP 260
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 115/276 (41%), Gaps = 30/276 (10%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
I+ ++L IG G FG+V Y+S E+ VA+K D +R E+
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGI-YMSPEN--PAMAVAIKTCKNCTSDSVR---EKFLQ 60
Query: 98 LFLKCQGVEGICWLQGISVIN-GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDL 156
L + + ++ I VI + IIM+ Q++ L L+++ YA L
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 120
Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSD---LPRRLGT 213
+ + L SK + ++ N +++ D LGD + LP +
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK--- 177
Query: 214 PNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR 267
+MAPE I+F +D W F + E+L GV+P G +++ +
Sbjct: 178 --WMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 227
Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
+ +P +P PP + +++ C+ YD RP T++
Sbjct: 228 GERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 117/276 (42%), Gaps = 30/276 (10%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
I+ ++L IG G FG+V Y+S E+ VA+K D +R E+
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGI-YMSPEN--PAMAVAIKTCKNCTSDSVR---EKFLQ 60
Query: 98 LFLKCQGVEGICWLQGISVIN-GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDL 156
L + + ++ I VI + IIM+ Q++ L L+++ YA L
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQL 120
Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSD---LPRRLGT 213
+ + L SK + ++ N +++ D LGD + LP +
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIK--- 177
Query: 214 PNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR 267
+MAPE I+F +D W F + E+L GV+P G +++ +
Sbjct: 178 --WMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 227
Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
+ +P +P PP + +++ C+ YD RP T++
Sbjct: 228 GERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 106/269 (39%), Gaps = 24/269 (8%)
Query: 35 NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
+AW P +L+L ++G+G FGEVW+ T +T VA+K L P L E
Sbjct: 11 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 63
Query: 94 RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
+K E + L + +I +GS+ D + G L L + A
Sbjct: 64 ---AQVMKKLRHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMA 120
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNE---ADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
+A G+ + + +L+ N ++ E A G + P +
Sbjct: 121 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIK 180
Query: 211 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQ 269
+ APE + G + ++D W F + E+ T G P G E+ D V R
Sbjct: 181 -----WTAPEA---ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 232
Query: 270 EIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
+ P P P ++ +++ C+ D RP
Sbjct: 233 RM-PCPPECPESLHDLMCQCWRKDPEERP 260
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 118/286 (41%), Gaps = 41/286 (14%)
Query: 35 NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
+AW P +L+L ++G+G FGEVW+ T +T VA+K L P L E
Sbjct: 260 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 312
Query: 94 RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVFR 151
L+ + + +Q +V++ + I+ Y +GS+ D + G L L +
Sbjct: 313 AQVMKKLRHEKL-----VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 367
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
A +A G+ + + +L+ N ++ E + D L R +
Sbjct: 368 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF--------------GLARLI 413
Query: 212 GTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEI 261
Y A P +W PE + G + ++D W F + E+ T G P G E+
Sbjct: 414 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 473
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
D V R + P P P ++ +++ C+ + RP + L+ F
Sbjct: 474 LDQVERGYRM-PCPPECPESLHDLMCQCWRKEPEERPTF-EYLQAF 517
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 115/286 (40%), Gaps = 51/286 (17%)
Query: 43 LKLRHRIGRGPFGEVWLAT--HYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFL 100
+ ++H++G G +GEV++ Y T VAVK L KED M V + FL
Sbjct: 34 ITMKHKLGGGQYGEVYVGVWKKYSLT--------VAVKTL---KEDTMEV------EEFL 76
Query: 101 KCQGV------EGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYA 153
K V + L G+ + I+ ++ G++ D + + +++ + A
Sbjct: 77 KEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMA 136
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
++ + L K + +L N ++ E + D L R +
Sbjct: 137 TQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADF--------------GLSRLMTG 182
Query: 214 PNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYD 263
Y A P +W PE S ++D W F + E+ T G+ P G + ++YD
Sbjct: 183 DTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYD 242
Query: 264 AVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
+ + + P G PP V ++ C+++ RP + + F++
Sbjct: 243 LLEKGYRMEQ-PEGCPPKVYELMRACWKWSPADRPSFAETHQAFET 287
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 8/147 (5%)
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 217
QG+ LH+ ++ +LK N LN+ +GD DL GTPNY+
Sbjct: 153 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL---CGTPNYI 209
Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
APE + SFE D W C + +L G P + E Y + + + +P
Sbjct: 210 APEVL---CKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY--SVPRH 264
Query: 278 LPPAVENVLLGCFEYDLRSRPLMTDIL 304
+ P ++ D RP + ++L
Sbjct: 265 INPVASALIRRMLHADPTLRPSVAELL 291
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 94/217 (43%), Gaps = 23/217 (10%)
Query: 116 VINGKICIIMKFYEG-SVGDRMAQL------KGGKLSLSNVFRYAIDLAQGILQLHSKGI 168
V+ ++ ++MK G SV D + + K G L S + ++ +G+ LH G
Sbjct: 83 VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ 142
Query: 169 LVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR--LGTPNYMAPEQWQPEV 226
+ ++K N +L E + D + + R+ +GTP +MAPE + +V
Sbjct: 143 IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME-QV 201
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLP------- 279
RG F+ D W F + IE+ TG P ++ + + + P + +G+
Sbjct: 202 RG-YDFKADIWSFGITAIELATGAAPYHKYPPMKVL-MLTLQNDPPSLETGVQDKEMLKK 259
Query: 280 --PAVENVLLGCFEYDLRSRPLMTDILR--VFKSSQN 312
+ ++ C + D RP ++LR F+ ++N
Sbjct: 260 YGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKN 296
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 49 LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N I+++ + D GTP Y+APE +
Sbjct: 161 DLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---I 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 270 RNLLQVDLTKR 280
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 8/147 (5%)
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 217
QG+ LH+ ++ +LK N LN+ +GD DL GTPNY+
Sbjct: 137 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL---CGTPNYI 193
Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
APE + SFE D W C + +L G P + E Y + + + +P
Sbjct: 194 APEVL---CKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY--SVPRH 248
Query: 278 LPPAVENVLLGCFEYDLRSRPLMTDIL 304
+ P ++ D RP + ++L
Sbjct: 249 INPVASALIRRMLHADPTLRPSVAELL 275
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 129/309 (41%), Gaps = 35/309 (11%)
Query: 5 VAAGQPADFEYEVFDDSDHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYL 64
V+ + D+ E+ D+ D + ++ D I+ ++L IG G FG+V Y+
Sbjct: 359 VSVSETDDYA-EIIDEEDTY--TMPSTRDYE--IQRERIELGRCIGEGQFGDVHQGI-YM 412
Query: 65 STEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN-GKICI 123
S E+ VA+K D +R E+ L + + ++ I VI + I
Sbjct: 413 SPEN--PAMAVAIKTCKNCTSDSVR---EKFLQEALTMRQFDHPHIVKLIGVITENPVWI 467
Query: 124 IMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 183
IM+ Q++ L L+++ YA L+ + L SK + ++ N +++
Sbjct: 468 IMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN 527
Query: 184 DRAVLGDVXXXXXXXXXXXXSSD---LPRRLGTPNYMAPEQWQPEVRGPISFE-----TD 235
D LGD + LP + +MAPE I+F +D
Sbjct: 528 DCVKLGDFGLSRYMEDSTYYKASKGKLPIK-----WMAPES--------INFRRFTSASD 574
Query: 236 SWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDL 294
W F + E+L GV+P G +++ + + +P +P PP + +++ C+ YD
Sbjct: 575 VWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDP 633
Query: 295 RSRPLMTDI 303
RP T++
Sbjct: 634 SRRPRFTEL 642
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 127/308 (41%), Gaps = 53/308 (17%)
Query: 31 SNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKEDR 87
S + + W ++ + + ++H++G G +GEV+ + Y T VAVK L KED
Sbjct: 2 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KEDT 50
Query: 88 MRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLK 140
M V + FLK V + L G+ II++F G++ D + +
Sbjct: 51 MEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN 104
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
++S + A ++ + L K + +L N ++ E + D
Sbjct: 105 RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF--------- 155
Query: 201 XXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GV 250
L R + Y A P +W PE S ++D W F + E+ T G+
Sbjct: 156 -----GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 210
Query: 251 QPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSS 310
P G + ++Y+ + + + P G P V ++ C++++ RP +I + F++
Sbjct: 211 SPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
Query: 311 -QNSVHSD 317
Q S SD
Sbjct: 270 FQESSISD 277
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 127/309 (41%), Gaps = 53/309 (17%)
Query: 30 TSNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKED 86
+S + + W ++ + + ++H++G G +GEV+ + Y T VAVK L KED
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KED 54
Query: 87 RMRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQL 139
M V + FLK V + L G+ II +F G++ D + +
Sbjct: 55 TMEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 108
Query: 140 KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXX 199
++S + A ++ + L K + +L N ++ E + D
Sbjct: 109 NRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF-------- 160
Query: 200 XXXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-G 249
L R + Y A P +W PE S ++D W F + E+ T G
Sbjct: 161 ------GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 214
Query: 250 VQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
+ P G + ++Y+ + + + P G P V ++ C++++ RP +I + F++
Sbjct: 215 MSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 273
Query: 310 S-QNSVHSD 317
Q S SD
Sbjct: 274 MFQESSISD 282
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 8/153 (5%)
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
Y + G LH ++ +LK N LNE +GD L
Sbjct: 120 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL---C 176
Query: 212 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 271
GTPNY+APE + SFE D W C + +L G P + E Y + + +
Sbjct: 177 GTPNYIAPEVLSKKGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY- 232
Query: 272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
IP + P +++ + D +RP + ++L
Sbjct: 233 -SIPKHINPVAASLIQKMLQTDPTARPTINELL 264
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 115/276 (41%), Gaps = 30/276 (10%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
I+ ++L IG G FG+V Y+S E+ VA+K D +R E+
Sbjct: 35 IQRERIELGRCIGEGQFGDVHQGI-YMSPEN--PALAVAIKTCKNCTSDSVR---EKFLQ 88
Query: 98 LFLKCQGVEGICWLQGISVIN-GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDL 156
L + + ++ I VI + IIM+ Q++ L L+++ YA L
Sbjct: 89 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 148
Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSD---LPRRLGT 213
+ + L SK + ++ N +++ D LGD + LP +
Sbjct: 149 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK--- 205
Query: 214 PNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR 267
+MAPE I+F +D W F + E+L GV+P G +++ +
Sbjct: 206 --WMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 255
Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
+ +P +P PP + +++ C+ YD RP T++
Sbjct: 256 GERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 290
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 127/308 (41%), Gaps = 53/308 (17%)
Query: 31 SNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKEDR 87
S + + W ++ + + ++H++G G +GEV+ + Y T VAVK L KED
Sbjct: 2 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KEDT 50
Query: 88 MRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLK 140
M V + FLK V + L G+ II++F G++ D + +
Sbjct: 51 MEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN 104
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
++S + A ++ + L K + +L N ++ E + D
Sbjct: 105 RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF--------- 155
Query: 201 XXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GV 250
L R + Y A P +W PE S ++D W F + E+ T G+
Sbjct: 156 -----GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 210
Query: 251 QPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSS 310
P G + ++Y+ + + + P G P V ++ C++++ RP +I + F++
Sbjct: 211 SPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
Query: 311 -QNSVHSD 317
Q S SD
Sbjct: 270 FQESSISD 277
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 114/277 (41%), Gaps = 40/277 (14%)
Query: 35 NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
+AW P +L+L ++G+G FGEVW+ T +T VA+K L P L E
Sbjct: 2 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 54
Query: 94 RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVFR 151
L+ + + +Q +V++ + I+ Y +GS+ D + G L L +
Sbjct: 55 AQVMKKLRHEKL-----VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 109
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
A +A G+ + + +L+ N ++ E + D L R +
Sbjct: 110 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF--------------GLARLI 155
Query: 212 GTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEI 261
Y A P +W PE + G + ++D W F + E+ T G P G E+
Sbjct: 156 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 215
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
D V R + P P P ++ +++ C+ D RP
Sbjct: 216 LDQVERGYRM-PCPPECPESLHDLMCQCWRKDPEERP 251
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 10/144 (6%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC 102
+L +IG G FGE++L T+ + E EVA+K L VK ++L E + ++
Sbjct: 9 FRLGRKIGSGSFGEIYLGTNIQTNE------EVAIK-LENVKTKHPQLLYE--SKIYRIL 59
Query: 103 QGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQ 162
QG GI ++ V ++M S+ D + KLSL V A + +
Sbjct: 60 QGGTGIPNVRWFGVEGDYNVLVMDLLGPSLED-LFNFCSRKLSLKTVLMLADQMINRVEF 118
Query: 163 LHSKGILVLNLKPFNFILNEADRA 186
+HSK L ++KP NF++ RA
Sbjct: 119 VHSKSFLHRDIKPDNFLMGLGRRA 142
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 115/276 (41%), Gaps = 30/276 (10%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
I+ ++L IG G FG+V Y+S E+ VA+K D +R E+
Sbjct: 10 IQRERIELGRCIGEGQFGDVHQGI-YMSPEN--PALAVAIKTCKNCTSDSVR---EKFLQ 63
Query: 98 LFLKCQGVEGICWLQGISVIN-GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDL 156
L + + ++ I VI + IIM+ Q++ L L+++ YA L
Sbjct: 64 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 123
Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSD---LPRRLGT 213
+ + L SK + ++ N +++ D LGD + LP +
Sbjct: 124 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK--- 180
Query: 214 PNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR 267
+MAPE I+F +D W F + E+L GV+P G +++ +
Sbjct: 181 --WMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 230
Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
+ +P +P PP + +++ C+ YD RP T++
Sbjct: 231 GERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 265
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 115/276 (41%), Gaps = 30/276 (10%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
I+ ++L IG G FG+V Y+S E+ VA+K D +R E+
Sbjct: 12 IQRERIELGRCIGEGQFGDVHQGI-YMSPEN--PALAVAIKTCKNCTSDSVR---EKFLQ 65
Query: 98 LFLKCQGVEGICWLQGISVIN-GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDL 156
L + + ++ I VI + IIM+ Q++ L L+++ YA L
Sbjct: 66 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 125
Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSD---LPRRLGT 213
+ + L SK + ++ N +++ D LGD + LP +
Sbjct: 126 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK--- 182
Query: 214 PNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR 267
+MAPE I+F +D W F + E+L GV+P G +++ +
Sbjct: 183 --WMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 232
Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
+ +P +P PP + +++ C+ YD RP T++
Sbjct: 233 GERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 267
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 117/299 (39%), Gaps = 24/299 (8%)
Query: 23 HLRTAVATSNDTNAWIKPSALKLR-HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH 81
H AV N P L + RIG+G FGEV+ D VA+KI+
Sbjct: 4 HSPVAVQVPGMQNNIADPEELFTKLERIGKGSFGEVFKGI------DNRTQQVVAIKIID 57
Query: 82 PVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG 141
+ + +++ + +C + G + K+ IIM++ G G + L+
Sbjct: 58 LEEAEDEIEDIQQEITVLSQCDS-SYVTKYYGSYLKGSKLWIIMEYLGG--GSALDLLRA 114
Query: 142 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 201
G + ++ +G+ LHS+ + ++K N +L+E GDV
Sbjct: 115 GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQ-----GDVKLADFGVAGQ 169
Query: 202 XXSSDLPRR--LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD 259
+ + R +GTP +MAPE Q + + D W + IE+ G P
Sbjct: 170 LTDTQIKRNTFVGTPFWMAPEVIQ---QSAYDSKADIWSLGITAIELAKGEPPNSDMHPM 226
Query: 260 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR---VFKSSQNSVH 315
+ ++ + P + + + + C D RP ++L+ + K+S+ + +
Sbjct: 227 RVL-FLIPKNNPPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNSKKTSY 284
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 8/153 (5%)
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
Y + G LH ++ +LK N LNE +GD L
Sbjct: 144 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL---C 200
Query: 212 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 271
GTPNY+APE + SFE D W C + +L G P + E Y + + +
Sbjct: 201 GTPNYIAPEVLSKKGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY- 256
Query: 272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
IP + P +++ + D +RP + ++L
Sbjct: 257 -SIPKHINPVAASLIQKMLQTDPTARPTINELL 288
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 115/276 (41%), Gaps = 30/276 (10%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
I+ ++L IG G FG+V Y+S E+ VA+K D +R E+
Sbjct: 9 IQRERIELGRCIGEGQFGDVHQGI-YMSPEN--PALAVAIKTCKNCTSDSVR---EKFLQ 62
Query: 98 LFLKCQGVEGICWLQGISVIN-GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDL 156
L + + ++ I VI + IIM+ Q++ L L+++ YA L
Sbjct: 63 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 122
Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSD---LPRRLGT 213
+ + L SK + ++ N +++ D LGD + LP +
Sbjct: 123 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK--- 179
Query: 214 PNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR 267
+MAPE I+F +D W F + E+L GV+P G +++ +
Sbjct: 180 --WMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 229
Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
+ +P +P PP + +++ C+ YD RP T++
Sbjct: 230 GERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 264
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
IG G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 49 IGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 270 RNLLQVDLTKR 280
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 8/153 (5%)
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
Y + G LH ++ +LK N LNE +GD L
Sbjct: 146 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL---C 202
Query: 212 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 271
GTPNY+APE + SFE D W C + +L G P + E Y + + +
Sbjct: 203 GTPNYIAPEVLSKKGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY- 258
Query: 272 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
IP + P +++ + D +RP + ++L
Sbjct: 259 -SIPKHINPVAASLIQKMLQTDPTARPTINELL 290
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 115/276 (41%), Gaps = 30/276 (10%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
I+ ++L IG G FG+V Y+S E+ VA+K D +R E+
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGI-YMSPEN--PALAVAIKTCKNCTSDSVR---EKFLQ 60
Query: 98 LFLKCQGVEGICWLQGISVIN-GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDL 156
L + + ++ I VI + IIM+ Q++ L L+++ YA L
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 120
Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSD---LPRRLGT 213
+ + L SK + ++ N +++ D LGD + LP +
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK--- 177
Query: 214 PNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR 267
+MAPE I+F +D W F + E+L GV+P G +++ +
Sbjct: 178 --WMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 227
Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
+ +P +P PP + +++ C+ YD RP T++
Sbjct: 228 GERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 118/291 (40%), Gaps = 40/291 (13%)
Query: 43 LKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFL 100
+ ++H++G G +GEV+ + Y T VAVK L KED M V + FL
Sbjct: 13 ITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KEDTMEV------EEFL 55
Query: 101 KCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYA 153
K V + L G+ II++F G++ D + + ++S + A
Sbjct: 56 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMA 115
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS---SDLPRR 210
++ + L K + +L N ++ E + D + + P +
Sbjct: 116 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK 175
Query: 211 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQ 269
P +A S ++D W F + E+ T G+ P G ++Y+ + +
Sbjct: 176 WTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDY 227
Query: 270 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSS-QNSVHSDGG 319
+ P G P V ++ C++++ RP +I + F++ Q S SD G
Sbjct: 228 RMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEG 277
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 115/276 (41%), Gaps = 30/276 (10%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
I+ ++L IG G FG+V Y+S E+ VA+K D +R E+
Sbjct: 4 IQRERIELGRCIGEGQFGDVHQGI-YMSPEN--PALAVAIKTCKNCTSDSVR---EKFLQ 57
Query: 98 LFLKCQGVEGICWLQGISVIN-GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDL 156
L + + ++ I VI + IIM+ Q++ L L+++ YA L
Sbjct: 58 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 117
Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSD---LPRRLGT 213
+ + L SK + ++ N +++ D LGD + LP +
Sbjct: 118 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK--- 174
Query: 214 PNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR 267
+MAPE I+F +D W F + E+L GV+P G +++ +
Sbjct: 175 --WMAPES--------INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 224
Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
+ +P +P PP + +++ C+ YD RP T++
Sbjct: 225 GERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 259
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 106/285 (37%), Gaps = 24/285 (8%)
Query: 37 WIKPSALKLRHRIGR----GPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKED---RM 88
PS L R+ +G G EV LA D + +VAVK+L + D +
Sbjct: 21 MTTPSHLSDRYELGEILGFGGMSEVHLA------RDLRLHRDVAVKVLRADLARDPSFYL 74
Query: 89 RVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSN 148
R E N L + + G + I+ Y V R G ++
Sbjct: 75 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 134
Query: 149 VFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLP 208
D Q + H GI+ ++KP N +++ + + D +
Sbjct: 135 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 194
Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR 268
+GT Y++PEQ + + + +D + C + E+LTG P G S + VR
Sbjct: 195 AVIGTAQYLSPEQARGD---SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 251
Query: 269 QEIPPIP--SGLPPAVENVLLGCFEYDLRSR-----PLMTDILRV 306
IPP GL ++ V+L + +R + D++RV
Sbjct: 252 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 296
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 106/285 (37%), Gaps = 24/285 (8%)
Query: 37 WIKPSALKLRHRIGR----GPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKED---RM 88
PS L R+ +G G EV LA D + +VAVK+L + D +
Sbjct: 4 MTTPSHLSDRYELGEILGFGGMSEVHLA------RDLRLHRDVAVKVLRADLARDPSFYL 57
Query: 89 RVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSN 148
R E N L + + G + I+ Y V R G ++
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 117
Query: 149 VFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLP 208
D Q + H GI+ ++KP N +++ + + D +
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR 268
+GT Y++PEQ + + + +D + C + E+LTG P G S + VR
Sbjct: 178 AVIGTAQYLSPEQARGD---SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 269 QEIPPIP--SGLPPAVENVLLGCFEYDLRSR-----PLMTDILRV 306
IPP GL ++ V+L + +R + D++RV
Sbjct: 235 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 118/286 (41%), Gaps = 41/286 (14%)
Query: 35 NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
+AW P +L+L ++G+G FGEVW+ T +T VA+K L P L E
Sbjct: 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 229
Query: 94 RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVFR 151
L+ + + +Q +V++ + I+ Y +GS+ D + G L L +
Sbjct: 230 AQVMKKLRHEKL-----VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 284
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
A +A G+ + + +L+ N ++ E + D L R +
Sbjct: 285 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF--------------GLARLI 330
Query: 212 GTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEI 261
Y A P +W PE + G + ++D W F + E+ T G P G E+
Sbjct: 331 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 390
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
D V R + P P P ++ +++ C+ + RP + L+ F
Sbjct: 391 LDQVERGYRM-PCPPECPESLHDLMCQCWRKEPEERPTF-EYLQAF 434
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 118/286 (41%), Gaps = 41/286 (14%)
Query: 35 NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
+AW P +L+L ++G+G FGEVW+ T +T VA+K L P L E
Sbjct: 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 229
Query: 94 RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVFR 151
L+ + + +Q +V++ + I+ Y +GS+ D + G L L +
Sbjct: 230 AQVMKKLRHEKL-----VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 284
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
A +A G+ + + +L+ N ++ E + D L R +
Sbjct: 285 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF--------------GLARLI 330
Query: 212 GTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEI 261
Y A P +W PE + G + ++D W F + E+ T G P G E+
Sbjct: 331 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 390
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
D V R + P P P ++ +++ C+ + RP + L+ F
Sbjct: 391 LDQVERGYRM-PCPPECPESLHDLMCQCWRKEPEERPTF-EYLQAF 434
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 126/308 (40%), Gaps = 53/308 (17%)
Query: 31 SNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKEDR 87
S + + W ++ + + ++H++G G +GEV+ + Y T VAVK L KED
Sbjct: 2 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KEDT 50
Query: 88 MRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLK 140
M V + FLK V + L G+ II +F G++ D + +
Sbjct: 51 MEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN 104
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
++S + A ++ + L K + +L N ++ E + D
Sbjct: 105 RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF--------- 155
Query: 201 XXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GV 250
L R + Y A P +W PE S ++D W F + E+ T G+
Sbjct: 156 -----GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 210
Query: 251 QPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSS 310
P G + ++Y+ + + + P G P V ++ C++++ RP +I + F++
Sbjct: 211 SPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
Query: 311 -QNSVHSD 317
Q S SD
Sbjct: 270 FQESSISD 277
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 102/251 (40%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 49 LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D + GTP Y+APE +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLA------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 270 RNLLQVDLTKR 280
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 121/292 (41%), Gaps = 32/292 (10%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH-PVKEDRMRVLLERLN 96
IK + L+ +G G FG+V+LA Y + D+ VAVK L P R +R
Sbjct: 12 IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKM-LVAVKALKDPTLAARKD--FQREA 68
Query: 97 DLFLKCQGVEGICWLQGISVINGKICIIM---------KFYEGSVGDRMAQLKG------ 141
+L Q E I G+ + ++ KF D M + G
Sbjct: 69 ELLTNLQH-EHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAK 127
Query: 142 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 201
G+L LS + A +A G++ L S+ + +L N ++ +GD
Sbjct: 128 GELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDF-----GMSRD 182
Query: 202 XXSSDLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCGRS 257
S+D R G + M P +W P + + E+D W F + E+ T G QP S
Sbjct: 183 VYSTDYYRVGG--HTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS 240
Query: 258 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
E+ + + + + + P P V +V+LGC++ + + R + +I ++ +
Sbjct: 241 NTEVIECITQGRVLER-PRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHA 291
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 109/270 (40%), Gaps = 26/270 (9%)
Query: 35 NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
+AW P +L+L ++G+G FGEVW+ T +T VA+K L P L E
Sbjct: 11 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 63
Query: 94 RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRY 152
+K E + L + V I I+ ++ +GS+ D + G L L +
Sbjct: 64 ---AQVMKKIRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 153 AIDLAQGILQLHSKGILVLNLKPFNFILNE---ADRAVLGDVXXXXXXXXXXXXSSDLPR 209
A +A G+ + + +L+ N ++ E A G + P
Sbjct: 120 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 210 RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR 268
+ + APE + G + ++D W F + E+ T G P G E+ D V R
Sbjct: 180 K-----WTAPEA---ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 231
Query: 269 QEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
+ P P P ++ +++ C+ D RP
Sbjct: 232 YRM-PCPPECPESLHDLMCQCWRKDPEERP 260
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 36 LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 89
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 90 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 147
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N +++E + D GTP Y+APE +
Sbjct: 148 DLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 198
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 199 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 256
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 257 RNLLQVDLTKR 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 126/308 (40%), Gaps = 53/308 (17%)
Query: 31 SNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKEDR 87
S + + W ++ + + ++H++G G +GEV+ + Y T VAVK L KED
Sbjct: 2 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KEDT 50
Query: 88 MRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLK 140
M V + FLK V + L G+ II +F G++ D + +
Sbjct: 51 MEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN 104
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
++S + A ++ + L K + +L N ++ E + D
Sbjct: 105 RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF--------- 155
Query: 201 XXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GV 250
L R + Y A P +W PE S ++D W F + E+ T G+
Sbjct: 156 -----GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 210
Query: 251 QPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSS 310
P G + ++Y+ + + + P G P V ++ C++++ RP +I + F++
Sbjct: 211 SPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
Query: 311 -QNSVHSD 317
Q S SD
Sbjct: 270 FQESSISD 277
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 114/290 (39%), Gaps = 22/290 (7%)
Query: 15 YEVFDDSDHLRTAVATSN-DTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYH 73
++ F +SD N + N + + + IGRG FGEV+ D
Sbjct: 161 FQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVY------GCRKADTGK 214
Query: 74 EVAVKILHP----VKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE 129
A+K L +K+ L ER+ + I + K+ I+
Sbjct: 215 MYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 274
Query: 130 GSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 188
G GD L + G S +++ YA ++ G+ +H++ ++ +LKP N +L+E +
Sbjct: 275 G--GDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRI 332
Query: 189 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 248
D+ +S +GT YMAPE Q V S D + C + ++L
Sbjct: 333 SDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQKGVAYDSS--ADWFSLGCMLFKLLR 385
Query: 249 GVQP-RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 297
G P R ++ D+ + +P P + ++L G + D+ R
Sbjct: 386 GHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRR 435
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 114/290 (39%), Gaps = 22/290 (7%)
Query: 15 YEVFDDSDHLRTAVATSN-DTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYH 73
++ F +SD N + N + + + IGRG FGEV+ D
Sbjct: 162 FQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVY------GCRKADTGK 215
Query: 74 EVAVKILHP----VKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE 129
A+K L +K+ L ER+ + I + K+ I+
Sbjct: 216 MYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 275
Query: 130 GSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 188
G GD L + G S +++ YA ++ G+ +H++ ++ +LKP N +L+E +
Sbjct: 276 G--GDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRI 333
Query: 189 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 248
D+ +S +GT YMAPE Q V S D + C + ++L
Sbjct: 334 SDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQKGVAYDSS--ADWFSLGCMLFKLLR 386
Query: 249 GVQP-RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 297
G P R ++ D+ + +P P + ++L G + D+ R
Sbjct: 387 GHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRR 436
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 111/271 (40%), Gaps = 28/271 (10%)
Query: 35 NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
+AW P +L+L ++G+G FGEVW+ T +T VA+K L P L E
Sbjct: 11 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 63
Query: 94 RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVFR 151
L+ + + +Q +V++ + I+ Y +GS+ D + G L L +
Sbjct: 64 AQVMKKLRHEKL-----VQLYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNE---ADRAVLGDVXXXXXXXXXXXXSSDLP 208
A +A G+ + + +L+ N ++ E A G + P
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR 267
+ + APE + G + ++D W F + E+ T G P G E+ D V R
Sbjct: 179 IK-----WTAPEA---ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
+ P P P ++ +++ C+ D RP
Sbjct: 231 GYRM-PCPPECPESLHDLMCQCWRKDPEERP 260
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 21/208 (10%)
Query: 116 VINGKICIIMKFYEG-SVGDRMAQL------KGGKLSLSNVFRYAIDLAQGILQLHSKGI 168
V+ ++ ++MK G SV D + + K G L S + ++ +G+ LH G
Sbjct: 78 VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ 137
Query: 169 LVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR--LGTPNYMAPEQWQPEV 226
+ ++K N +L E + D + + R+ +GTP +MAPE + +V
Sbjct: 138 IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME-QV 196
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLP------- 279
RG F+ D W F + IE+ TG P ++ + + + P + +G+
Sbjct: 197 RG-YDFKADIWSFGITAIELATGAAPYHKYPPMKVL-MLTLQNDPPSLETGVQDKEMLKK 254
Query: 280 --PAVENVLLGCFEYDLRSRPLMTDILR 305
+ ++ C + D RP ++LR
Sbjct: 255 YGKSFRKMISLCLQKDPEKRPTAAELLR 282
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 19/209 (9%)
Query: 47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP---VKEDRMRVLLERLNDLFLKCQ 103
++ G G FG V+ +T VAVK L + + ++ ++ + KCQ
Sbjct: 28 NKXGEGGFGVVYKGYVNNTT--------VAVKKLAAMVDITTEELKQQFDQEIKVXAKCQ 79
Query: 104 GVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGK-LSLSNVFRYAIDLAQGIL 161
E + L G S +C++ + GS+ DR++ L G LS + A A GI
Sbjct: 80 H-ENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGIN 138
Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
LH + ++K N +L+EA A + D R +GT Y APE
Sbjct: 139 FLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVX-XSRIVGTTAYXAPEA 197
Query: 222 WQPEVRGPISFETDSWGFACSIIEMLTGV 250
+RG I+ ++D + F ++E++TG+
Sbjct: 198 ----LRGEITPKSDIYSFGVVLLEIITGL 222
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 70 LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 181
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 182 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLC------GTPEYLAPEII---L 232
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 290
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 291 RNLLQVDLTKR 301
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 114/280 (40%), Gaps = 29/280 (10%)
Query: 35 NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
+AW P +L+L ++G+G FGEVW+ T +T VA+K L P L E
Sbjct: 11 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 63
Query: 94 RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVFR 151
L+ + + +Q +V++ + I+ Y +GS+ D + G L L +
Sbjct: 64 AQVMKKLRHEKL-----VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNE---ADRAVLGDVXXXXXXXXXXXXSSDLP 208
A +A G+ + + +L N ++ E A G + P
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR 267
+ + APE + G + ++D W F + E+ T G P G E+ D V R
Sbjct: 179 IK-----WTAPEA---ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
+ P P P ++ +++ C+ D RP + L+ F
Sbjct: 231 GYRM-PCPPECPESLHDLMCQCWRKDPEERPTF-EYLQAF 268
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 119/287 (41%), Gaps = 33/287 (11%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
I SA++ +G FG+V+ H ++ VA+K L E +R
Sbjct: 6 ISLSAVRFMEELGEDRFGKVY-KGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAM 64
Query: 98 LFLKCQGVEGICWL------QGISVI-----NGKI--CIIMKFYEGSVG----DRMAQLK 140
L + Q +C L Q +S+I +G + ++M+ VG DR +
Sbjct: 65 LRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK-- 122
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
L + +A G+ L S ++ +L N ++ + + D+
Sbjct: 123 -SALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVY-- 179
Query: 201 XXXSSDLPRRLGTPNYMAPEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGR 256
++D + LG N + P +W PE + G S ++D W + + E+ + G+QP CG
Sbjct: 180 ---AADYYKLLG--NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY 234
Query: 257 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
S ++ + ++R +++ P P P V +++ C+ RP DI
Sbjct: 235 SNQDVVE-MIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI 280
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 119/287 (41%), Gaps = 33/287 (11%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
I SA++ +G FG+V+ H ++ VA+K L E +R
Sbjct: 23 ISLSAVRFMEELGEDRFGKVY-KGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAM 81
Query: 98 LFLKCQGVEGICWL------QGISVI-----NGKI--CIIMKFYEGSVG----DRMAQLK 140
L + Q +C L Q +S+I +G + ++M+ VG DR +
Sbjct: 82 LRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK-- 139
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
L + +A G+ L S ++ +L N ++ + + D+
Sbjct: 140 -SALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVY-- 196
Query: 201 XXXSSDLPRRLGTPNYMAPEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGR 256
++D + LG N + P +W PE + G S ++D W + + E+ + G+QP CG
Sbjct: 197 ---AADYYKLLG--NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY 251
Query: 257 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
S ++ + ++R +++ P P P V +++ C+ RP DI
Sbjct: 252 SNQDVVE-MIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI 297
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 126/308 (40%), Gaps = 53/308 (17%)
Query: 31 SNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKEDR 87
S + + W ++ + + ++H++G G +GEV+ + Y T VAVK L KED
Sbjct: 4 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KEDT 52
Query: 88 MRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLK 140
M V + FLK V + L G+ II +F G++ D + +
Sbjct: 53 MEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN 106
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
+++ + A ++ + L K + +L N ++ E + D
Sbjct: 107 RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF--------- 157
Query: 201 XXXSSDLPRRLGTPNYMAPE------QWQ-PE--VRGPISFETDSWGFACSIIEMLT-GV 250
L R + Y AP +W PE S ++D W F + E+ T G+
Sbjct: 158 -----GLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 212
Query: 251 QPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSS 310
P G + ++Y+ + + + P G P V ++ C++++ RP +I + F++
Sbjct: 213 SPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
Query: 311 -QNSVHSD 317
Q S SD
Sbjct: 272 FQESSISD 279
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 110/270 (40%), Gaps = 28/270 (10%)
Query: 36 AWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLER 94
AW P +L+L ++G+G FGEVW+ T +T VA+K L P L E
Sbjct: 1 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQEA 53
Query: 95 LNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVFRY 152
L+ + + +Q +V++ + I+ Y +GS+ D + G L L +
Sbjct: 54 QVMKKLRHEKL-----VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 108
Query: 153 AIDLAQGILQLHSKGILVLNLKPFNFILNE---ADRAVLGDVXXXXXXXXXXXXSSDLPR 209
A +A G+ + + +L+ N ++ E A G + P
Sbjct: 109 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 168
Query: 210 RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR 268
+ + APE + G + ++D W F + E+ T G P G E+ D V R
Sbjct: 169 K-----WTAPEA---ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 220
Query: 269 QEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
+ P P P ++ +++ C+ D RP
Sbjct: 221 YRM-PCPPECPESLHDLMCQCWRKDPEERP 249
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 114/290 (39%), Gaps = 22/290 (7%)
Query: 15 YEVFDDSDHLRTAVATSN-DTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYH 73
++ F +SD N + N + + + IGRG FGEV+ D
Sbjct: 162 FQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVY------GCRKADTGK 215
Query: 74 EVAVKILHP----VKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE 129
A+K L +K+ L ER+ + I + K+ I+
Sbjct: 216 MYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 275
Query: 130 GSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 188
G GD L + G S +++ YA ++ G+ +H++ ++ +LKP N +L+E +
Sbjct: 276 G--GDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRI 333
Query: 189 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 248
D+ +S +GT YMAPE Q V S D + C + ++L
Sbjct: 334 SDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQKGVAYDSS--ADWFSLGCMLFKLLR 386
Query: 249 GVQP-RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 297
G P R ++ D+ + +P P + ++L G + D+ R
Sbjct: 387 GHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRR 436
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 114/290 (39%), Gaps = 22/290 (7%)
Query: 15 YEVFDDSDHLRTAVATSN-DTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYH 73
++ F +SD N + N + + + IGRG FGEV+ D
Sbjct: 162 FQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVY------GCRKADTGK 215
Query: 74 EVAVKILHP----VKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE 129
A+K L +K+ L ER+ + I + K+ I+
Sbjct: 216 MYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 275
Query: 130 GSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 188
G GD L + G S +++ YA ++ G+ +H++ ++ +LKP N +L+E +
Sbjct: 276 G--GDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRI 333
Query: 189 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 248
D+ +S +GT YMAPE Q V S D + C + ++L
Sbjct: 334 SDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQKGVAYDSS--ADWFSLGCMLFKLLR 386
Query: 249 GVQP-RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 297
G P R ++ D+ + +P P + ++L G + D+ R
Sbjct: 387 GHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRR 436
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 118/286 (41%), Gaps = 41/286 (14%)
Query: 35 NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
+AW P +L+L ++G+G FGEVW+ T +T VA+K L P L E
Sbjct: 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 229
Query: 94 RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVFR 151
L+ + + +Q +V++ + I+ Y +GS+ D + G L L +
Sbjct: 230 AQVMKKLRHEKL-----VQLYAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVD 284
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
A +A G+ + + +L+ N ++ E + D L R +
Sbjct: 285 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF--------------GLARLI 330
Query: 212 GTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEI 261
Y A P +W PE + G + ++D W F + E+ T G P G E+
Sbjct: 331 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 390
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
D V R + P P P ++ +++ C+ + RP + L+ F
Sbjct: 391 LDQVERGYRM-PCPPECPESLHDLMCQCWRKEPEERPTF-EYLQAF 434
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 125/302 (41%), Gaps = 41/302 (13%)
Query: 31 SNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKEDR 87
S + + W ++ + + ++H++G G +GEV+ + Y T VAVK L KED
Sbjct: 3 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KEDT 51
Query: 88 MRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLK 140
M V + FLK V + L G+ II++F G++ D + +
Sbjct: 52 MEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN 105
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
+++ + A ++ + L K + +L N ++ E + D
Sbjct: 106 RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 165
Query: 201 XXXS---SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGR 256
+ + P + P +A S ++D W F + E+ T G+ P G
Sbjct: 166 TXTAHAGAKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 217
Query: 257 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSS-QNSVH 315
+ ++Y+ + + + P G P V ++ C++++ RP +I + F++ Q S
Sbjct: 218 DLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 276
Query: 316 SD 317
SD
Sbjct: 277 SD 278
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 126/308 (40%), Gaps = 53/308 (17%)
Query: 31 SNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKEDR 87
S + + W ++ + + ++H++G G +GEV+ + Y T VAVK L KED
Sbjct: 3 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KEDT 51
Query: 88 MRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLK 140
M V + FLK V + L G+ II +F G++ D + +
Sbjct: 52 MEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN 105
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
+++ + A ++ + L K + +L N ++ E + D
Sbjct: 106 RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF--------- 156
Query: 201 XXXSSDLPRRLGTPNYMAPE------QWQ-PE--VRGPISFETDSWGFACSIIEMLT-GV 250
L R + Y AP +W PE S ++D W F + E+ T G+
Sbjct: 157 -----GLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 211
Query: 251 QPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSS 310
P G + ++Y+ + + + P G P V ++ C++++ RP +I + F++
Sbjct: 212 SPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270
Query: 311 -QNSVHSD 317
Q S SD
Sbjct: 271 FQESSISD 278
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 121/294 (41%), Gaps = 40/294 (13%)
Query: 30 TSNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKED 86
+S + + W ++ + + ++H++G G +GEV+ + Y T VAVK L KED
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KED 54
Query: 87 RMRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQL 139
M V + FLK V + L G+ II++F G++ D + +
Sbjct: 55 TMEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLREC 108
Query: 140 KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXX 199
+++ + A ++ + L K + +L N ++ E + D
Sbjct: 109 NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 168
Query: 200 XXXXS---SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCG 255
+ + P + P +A S ++D W F + E+ T G+ P G
Sbjct: 169 DTYTAHAGAKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
Query: 256 RSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
+ ++Y+ + + + P G P V ++ C++++ RP +I + F++
Sbjct: 221 IDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 273
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 114/277 (41%), Gaps = 40/277 (14%)
Query: 35 NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
+AW P +L+L ++G+G FGEVW+ T +T VA+K L P L E
Sbjct: 4 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 56
Query: 94 RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVFR 151
L+ + + +Q +V++ + I+ Y +GS+ D + G L L +
Sbjct: 57 AQVMKKLRHEKL-----VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 111
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
A +A G+ + + +L+ N ++ E + D L R +
Sbjct: 112 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF--------------GLARLI 157
Query: 212 GTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEI 261
Y A P +W PE + G + ++D W F + E+ T G P G E+
Sbjct: 158 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 217
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
D V R + P P P ++ +++ C+ + RP
Sbjct: 218 LDQVERGYRM-PCPPECPESLHDLMCQCWRKEPEERP 253
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 49 LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLX------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 270 RNLLQVDLTKR 280
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 110/264 (41%), Gaps = 21/264 (7%)
Query: 45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL--HPVKEDRMRVLLERLNDLFLKC 102
+R +G G FG+V LATHY + + +VA+K + +K+ M + +ER +LK
Sbjct: 13 IRETLGEGSFGKVKLATHYKTQQ------KVALKFISRQLLKKSDMHMRVER-EISYLKL 65
Query: 103 QGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQ 162
I L + I +++++ G + D + + K +++ R+ + I
Sbjct: 66 LRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKK--RMTEDEGRRFFQQIICAIEY 123
Query: 163 LHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQW 222
H I+ +LKP N +L++ + D + L G+PNY APE
Sbjct: 124 CHRHKIVHRDLKPENLLLDDNLNVKIADF----GLSNIMTDGNFLKTSCGSPNYAAPEVI 179
Query: 223 QPEVR-GPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA 281
++ GP E D W + ML G P + ++ V + +P L P
Sbjct: 180 NGKLYAGP---EVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKV--NSCVYVMPDFLSPG 234
Query: 282 VENVLLGCFEYDLRSRPLMTDILR 305
++++ D R + +I R
Sbjct: 235 AQSLIRRMIVADPMQRITIQEIRR 258
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 127/309 (41%), Gaps = 53/309 (17%)
Query: 30 TSNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKED 86
+S + + W ++ + + ++H++G G +GEV+ + Y T VAVK L KED
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KED 54
Query: 87 RMRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQL 139
M V + FLK V + L G+ II +F G++ D + +
Sbjct: 55 TMEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 108
Query: 140 KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXX 199
+++ + A ++ + L K + +L N ++ E + D
Sbjct: 109 NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF-------- 160
Query: 200 XXXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-G 249
L R + Y A P +W PE S ++D W F + E+ T G
Sbjct: 161 ------GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 214
Query: 250 VQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
+ P G + ++Y+ + + + P G P V ++ C++++ RP +I + F++
Sbjct: 215 MSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 273
Query: 310 S-QNSVHSD 317
Q S SD
Sbjct: 274 MFQESSISD 282
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 116/289 (40%), Gaps = 40/289 (13%)
Query: 43 LKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFL 100
+ ++H++G G FGEV+ + Y T VAVK L KED M V + FL
Sbjct: 13 ITMKHKLGGGQFGEVYEGVWKKYSLT--------VAVKTL---KEDTMEV------EEFL 55
Query: 101 KCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYA 153
K V + L G+ II +F G++ D + + ++S + A
Sbjct: 56 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMA 115
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS---SDLPRR 210
++ + L K + +L N ++ E + D + + P +
Sbjct: 116 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK 175
Query: 211 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQ 269
P +A S ++D W F + E+ T G+ P G ++Y+ + +
Sbjct: 176 WTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDY 227
Query: 270 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSS-QNSVHSD 317
+ P G P V ++ C++++ RP +I + F++ Q S SD
Sbjct: 228 RMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 275
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 112/271 (41%), Gaps = 28/271 (10%)
Query: 35 NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
+AW P +L+L ++G+G FGEVW+ T +T VA+K L P L E
Sbjct: 1 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 53
Query: 94 RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVFR 151
L+ + + +Q +V++ + I+ Y +GS+ D + G L L +
Sbjct: 54 AQVMKKLRHEKL-----VQLYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 108
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNE---ADRAVLGDVXXXXXXXXXXXXSSDLP 208
A +A G+ + + +L+ N ++ E A G + P
Sbjct: 109 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP 168
Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR 267
+ + APE + G + ++D W F + E+ T G P G E+ D V R
Sbjct: 169 IK-----WTAPEA---ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 220
Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
+ P P P ++ +++ C+ + RP
Sbjct: 221 GYRM-PCPPECPESLHDLMCQCWRKEPEERP 250
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 110/271 (40%), Gaps = 28/271 (10%)
Query: 35 NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
+AW P +L+L ++G+G FGEVW+ T +T VA+K L P L E
Sbjct: 11 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 63
Query: 94 RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVFR 151
L+ + + +Q +V++ + I+ Y +G + D + G L L +
Sbjct: 64 AQVMKKLRHEKL-----VQLYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVD 118
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNE---ADRAVLGDVXXXXXXXXXXXXSSDLP 208
A +A G+ + + +L+ N ++ E A G + P
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR 267
+ + APE + G + ++D W F + E+ T G P G E+ D V R
Sbjct: 179 IK-----WTAPEA---ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
+ P P P ++ +++ C+ D RP
Sbjct: 231 GYRM-PCPPECPESLHDLMCQCWRKDPEERP 260
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 49 LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 270 RNLLQVDLTKR 280
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 49 LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 270 RNLLQVDLTKR 280
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 49 LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 270 RNLLQVDLTKR 280
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 49 LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 270 RNLLQVDLTKR 280
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 49 LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 270 RNLLQVDLTKR 280
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 50 LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC------GTPEYLAPEII---L 212
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 270
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 271 RNLLQVDLTKR 281
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 70 LGTGSFGRVMLVKH---KETGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 181
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 182 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 232
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 290
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 291 RNLLQVDLTKR 301
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 50 LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 212
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 270
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 271 RNLLQVDLTKR 281
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 15/176 (8%)
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK- 166
I G +G+I I M+ +G D++ + K G++ + + +I + +G+ L K
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKH 127
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
I+ ++KP N ++N L D +GT +YM+PE+ Q
Sbjct: 128 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEF-----VGTRSYMSPERLQGT- 181
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV 282
S ++D W S++EM G PR ++ E+ D +V E PP LP AV
Sbjct: 182 --HYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIV--NEPPP---KLPSAV 230
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 121/297 (40%), Gaps = 40/297 (13%)
Query: 27 AVATSNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPV 83
A+ S + + W ++ + + ++H++G G +GEV+ + Y T VAVK L
Sbjct: 2 AMDPSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL--- 50
Query: 84 KEDRMRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRM 136
KED M V + FLK V + L G+ II +F G++ D +
Sbjct: 51 KEDTMEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 104
Query: 137 AQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXX 196
+ +++ + A ++ + L K + +L N ++ E + D
Sbjct: 105 RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL 164
Query: 197 XXXXXXXS---SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQP 252
+ + P + P +A S ++D W F + E+ T G+ P
Sbjct: 165 MTGDTYTAHAGAKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSP 216
Query: 253 RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
G + ++Y+ + + + P G P V ++ C++++ RP +I + F++
Sbjct: 217 YPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 272
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 123/302 (40%), Gaps = 41/302 (13%)
Query: 31 SNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKEDR 87
S + + W ++ + + ++H++G G +GEV+ + Y T VAVK L KED
Sbjct: 4 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KEDT 52
Query: 88 MRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLK 140
M V + FLK V + L G+ II +F G++ D + +
Sbjct: 53 MEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN 106
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
+++ + A ++ + L K + +L N ++ E + D
Sbjct: 107 RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 166
Query: 201 XXXS---SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGR 256
+ + P + P +A S ++D W F + E+ T G+ P G
Sbjct: 167 TYTAHAGAKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 218
Query: 257 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSS-QNSVH 315
+ ++Y+ + + + P G P V ++ C++++ RP +I + F++ Q S
Sbjct: 219 DLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 277
Query: 316 SD 317
SD
Sbjct: 278 SD 279
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 35 LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 88
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 89 LVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 146
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 147 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC------GTPEYLAPEII---L 197
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 198 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 255
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 256 RNLLQVDLTKR 266
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 120/294 (40%), Gaps = 40/294 (13%)
Query: 30 TSNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKED 86
+S + + W ++ + + ++H++G G +GEV+ + Y T VAVK L KED
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KED 54
Query: 87 RMRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQL 139
M V + FLK V + L G+ II +F G++ D + +
Sbjct: 55 TMEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 108
Query: 140 KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXX 199
+++ + A ++ + L K + +L N ++ E + D
Sbjct: 109 NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 168
Query: 200 XXXXS---SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCG 255
+ + P + P +A S ++D W F + E+ T G+ P G
Sbjct: 169 DTYTAHAGAKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
Query: 256 RSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
+ ++Y+ + + + P G P V ++ C++++ RP +I + F++
Sbjct: 221 IDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 273
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 50 LGTGSFGRVMLVKH---KETGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 212
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 270
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 271 RNLLQVDLTKR 281
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 42 LGTGSFGRVMLVKH---KETGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 95
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 153
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 154 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 204
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 262
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 263 RNLLQVDLTKR 273
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 114/276 (41%), Gaps = 27/276 (9%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
IK + L+ +G G FG+V+LA Y + D+ VAVK L D R R +
Sbjct: 10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKI-LVAVKTLKDAS-DNARKDFHREAE 67
Query: 98 LFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG------------GKLS 145
L Q E I G+ V + ++ ++ + ++ + G +L+
Sbjct: 68 LLTNLQH-EHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELT 126
Query: 146 LSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSS 205
S + A +A G++ L S+ + +L N ++ E +GD S+
Sbjct: 127 QSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDF-----GMSRDVYST 181
Query: 206 DLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEI 261
D R G + M P +W P + + E+D W + E+ T G QP S +E+
Sbjct: 182 DYYRVGG--HTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV 239
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 297
+ + + + + P P V ++LGC++ + R
Sbjct: 240 IECITQGRVLQR-PRTCPQEVYELMLGCWQREPHMR 274
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 50 LGTGSFGRVMLVKH---KETGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 212
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 270
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 271 RNLLQVDLTKR 281
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 6/120 (5%)
Query: 144 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXX-XXXXXX 202
+S ++V R + +G+ LH I+ L+LKP N +L+ LGD+
Sbjct: 128 VSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSI--YPLGDIKIVDFGMSRKIG 185
Query: 203 XSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIY 262
+ +L +GTP Y+APE + PI+ TD W +LT P G E Y
Sbjct: 186 HACELREIMGTPEYLAPEILNYD---PITTATDMWNIGIIAYMLLTHTSPFVGEDNQETY 242
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 123/304 (40%), Gaps = 41/304 (13%)
Query: 29 ATSNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKE 85
A + + W ++ + + ++H++G G +GEV+ + Y T VAVK L KE
Sbjct: 2 AMDPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KE 50
Query: 86 DRMRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQ 138
D M V + FLK V + L G+ II +F G++ D + +
Sbjct: 51 DTMEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE 104
Query: 139 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 198
+++ + A ++ + L K + +L N ++ E + D
Sbjct: 105 CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 164
Query: 199 XXXXXS---SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRC 254
+ + P + P +A S ++D W F + E+ T G+ P
Sbjct: 165 GDTYTAHAGAKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYP 216
Query: 255 GRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSS-QNS 313
G + ++Y+ + + + P G P V ++ C++++ RP +I + F++ Q S
Sbjct: 217 GIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 275
Query: 314 VHSD 317
SD
Sbjct: 276 SISD 279
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 126/308 (40%), Gaps = 53/308 (17%)
Query: 31 SNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKEDR 87
S + + W ++ + + ++H++G G +GEV+ + Y T VAVK L KED
Sbjct: 15 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KEDT 63
Query: 88 MRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLK 140
M V + FLK V + L G+ II +F G++ D + +
Sbjct: 64 MEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN 117
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
+++ + A ++ + L K + +L N ++ E + D
Sbjct: 118 RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF--------- 168
Query: 201 XXXSSDLPRRLGTPNYMA------PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GV 250
L R + Y A P +W PE S ++D W F + E+ T G+
Sbjct: 169 -----GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 223
Query: 251 QPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSS 310
P G + ++Y+ + + + P G P V ++ C++++ RP +I + F++
Sbjct: 224 SPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 282
Query: 311 -QNSVHSD 317
Q S SD
Sbjct: 283 FQESSISD 290
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 50 LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 212
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 270
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 271 RNLLQVDLTKR 281
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 50 LGTGSFGRVMLVKH---KETGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 212
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 270
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 271 RNLLQVDLTKR 281
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 104/259 (40%), Gaps = 37/259 (14%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 49 LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL--------GTPNYMA 218
++ +LKP N ++++ + D L +R+ GTP Y+A
Sbjct: 161 DLIYRDLKPENLMIDQQGYIKVTDF--------------GLAKRVKGRTWXLCGTPEYLA 206
Query: 219 PEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGL 278
PE + + D W I EM G P +IY+ +V + PS
Sbjct: 207 PEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 279 PPAVENVLLGCFEYDLRSR 297
++++L + DL R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 104/259 (40%), Gaps = 37/259 (14%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 49 LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL--------GTPNYMA 218
++ +LKP N ++++ + D L +R+ GTP Y+A
Sbjct: 161 DLIYRDLKPENLMIDQQGYIQVTDF--------------GLAKRVKGRTWXLCGTPEYLA 206
Query: 219 PEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGL 278
PE + + D W I EM G P +IY+ +V + PS
Sbjct: 207 PEII---LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHF 261
Query: 279 PPAVENVLLGCFEYDLRSR 297
++++L + DL R
Sbjct: 262 SSDLKDLLRNLLQVDLTKR 280
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 121/294 (41%), Gaps = 40/294 (13%)
Query: 30 TSNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKED 86
+S + + W ++ + + ++H++G G +GEV+ + Y T VAVK L KED
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KED 54
Query: 87 RMRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQL 139
M V + FLK V + L G+ II +F G++ D + +
Sbjct: 55 TMEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 108
Query: 140 KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXX 199
+++ + A ++ + L K + +L N ++ E + D
Sbjct: 109 NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 168
Query: 200 XXXXS---SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCG 255
+ + P + P +A S ++D W F + E+ T G+ P G
Sbjct: 169 DTXTAHAGAKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
Query: 256 RSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
+ ++Y+ + + + P G P V ++ C++++ RP +I + F++
Sbjct: 221 IDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 273
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 49 LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 270 RNLLQVDLTKR 280
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 49 LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 270 RNLLQVDLTKR 280
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 49 LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 270 RNLLQVDLTKR 280
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 50 LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 212
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 270
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 271 RNLLQVDLTKR 281
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 50 LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 212
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 270
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 271 RNLLQVDLTKR 281
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 50 LGTGSFGRVMLVKH---KETGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 212
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 270
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 271 RNLLQVDLTKR 281
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 49 LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 161 DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 270 RNLLQVDLTKR 280
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 49 LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 161 DLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 270 RNLLQVDLTKR 280
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 119/293 (40%), Gaps = 40/293 (13%)
Query: 31 SNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKEDR 87
S + + W ++ + + ++H++G G +GEV+ + Y T VAVK L KED
Sbjct: 2 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KEDT 50
Query: 88 MRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLK 140
M V + FLK V + L G+ II +F G++ D + +
Sbjct: 51 MEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN 104
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
+++ + A ++ + L K + +L N ++ E + D
Sbjct: 105 RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164
Query: 201 XXXS---SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGR 256
+ + P + P +A S ++D W F + E+ T G+ P G
Sbjct: 165 TYTAHAGAKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216
Query: 257 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
+ ++Y+ + + + P G P V ++ C++++ RP +I + F++
Sbjct: 217 DLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 268
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 115/280 (41%), Gaps = 29/280 (10%)
Query: 35 NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
+AW P +L+L ++G+G FGEVW+ T +T VA+K L P L E
Sbjct: 8 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 60
Query: 94 RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVFR 151
L+ + + +Q +V++ + I+ Y +GS+ D + G L L +
Sbjct: 61 AQVMKKLRHEKL-----VQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVD 115
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNE---ADRAVLGDVXXXXXXXXXXXXSSDLP 208
+ +A G+ + + +L+ N ++ E A G + P
Sbjct: 116 MSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 175
Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR 267
+ + APE + G + ++D W F + E+ T G P G E+ D V R
Sbjct: 176 IK-----WTAPEA---ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 227
Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
+ P P P ++ +++ C+ + RP + L+ F
Sbjct: 228 GYRM-PCPPECPESLHDLMCQCWRKEPEERPTF-EYLQAF 265
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 8/147 (5%)
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 217
QG+ LH+ ++ +LK N LN+ +GD L GTPNY+
Sbjct: 153 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTL---CGTPNYI 209
Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
APE + SFE D W C + +L G P + E Y + + + +P
Sbjct: 210 APEVL---CKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY--SVPRH 264
Query: 278 LPPAVENVLLGCFEYDLRSRPLMTDIL 304
+ P ++ D RP + ++L
Sbjct: 265 INPVASALIRRMLHADPTLRPSVAELL 291
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 115/289 (39%), Gaps = 40/289 (13%)
Query: 43 LKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFL 100
+ ++H++G G +GEV+ + Y T VAVK L KED M V + FL
Sbjct: 13 ITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KEDTMEV------EEFL 55
Query: 101 KCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYA 153
K V + L G+ II +F G++ D + + ++S + A
Sbjct: 56 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMA 115
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS---SDLPRR 210
++ + L K + +L N ++ E + D + + P +
Sbjct: 116 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIK 175
Query: 211 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQ 269
P +A S ++D W F + E+ T G+ P G ++Y+ + +
Sbjct: 176 WTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDY 227
Query: 270 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSS-QNSVHSD 317
+ P G P V ++ C++++ RP +I + F++ Q S SD
Sbjct: 228 RMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 275
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 119/293 (40%), Gaps = 40/293 (13%)
Query: 31 SNDTNAW-IKPSALKLRHRIGRGPFGEVW--LATHYLSTEDCDEYHEVAVKILHPVKEDR 87
S + + W ++ + + ++H++G G +GEV+ + Y T VAVK L KED
Sbjct: 2 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT--------VAVKTL---KEDT 50
Query: 88 MRVLLERLNDLFLKCQGV------EGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLK 140
M V + FLK V + L G+ II +F G++ D + +
Sbjct: 51 MEV------EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN 104
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
+++ + A ++ + L K + +L N ++ E + D
Sbjct: 105 RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164
Query: 201 XXXS---SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGR 256
+ + P + P +A S ++D W F + E+ T G+ P G
Sbjct: 165 TYTAHAGAKFPIKWTAPESLA--------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216
Query: 257 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
+ ++Y+ + + + P G P V ++ C++++ RP +I + F++
Sbjct: 217 DLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 268
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 64/170 (37%), Gaps = 14/170 (8%)
Query: 147 SNVFRYAIDLAQGILQLHSKGILV----LNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 202
S ++A+D A+G LH+ L+ LN + + R DV
Sbjct: 111 SQAVKFALDXARGXAFLHTLEPLIPRHALNSRSVXIDEDXTARISXADVKF--------- 161
Query: 203 XSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIY 262
S P R P ++APE Q + D W FA + E++T P S EI
Sbjct: 162 -SFQSPGRXYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIG 220
Query: 263 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN 312
V P IP G+ P V + C D RP I+ + + Q+
Sbjct: 221 XKVALEGLRPTIPPGISPHVSKLXKICXNEDPAKRPKFDXIVPILEKXQD 270
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 49 LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ + + YA + LHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 270 RNLLQVDLTKR 280
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 8/147 (5%)
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 217
QG+ LH+ ++ +LK N LN+ +GD L GTPNY+
Sbjct: 153 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXL---CGTPNYI 209
Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
APE + SFE D W C + +L G P + E Y + + + +P
Sbjct: 210 APEVL---CKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY--SVPRH 264
Query: 278 LPPAVENVLLGCFEYDLRSRPLMTDIL 304
+ P ++ D RP + ++L
Sbjct: 265 INPVASALIRRMLHADPTLRPSVAELL 291
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 115/280 (41%), Gaps = 29/280 (10%)
Query: 35 NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
+AW P +L+L ++G+G FGEVW+ T +T VA+K L P L E
Sbjct: 8 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-------RVAIKTLKPGTMSPEAFLQE 60
Query: 94 RLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVFR 151
L+ + + +Q +V++ + I+ Y +GS+ D + G L L +
Sbjct: 61 AQVMKKLRHEKL-----VQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVD 115
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNE---ADRAVLGDVXXXXXXXXXXXXSSDLP 208
+ +A G+ + + +L+ N ++ E A G + P
Sbjct: 116 MSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFP 175
Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR 267
+ + APE + G + ++D W F + E+ T G P G E+ D V R
Sbjct: 176 IK-----WTAPEA---ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 227
Query: 268 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
+ P P P ++ +++ C+ + RP + L+ F
Sbjct: 228 GYRM-PCPPECPESLHDLMCQCWRKEPEERPTF-EYLQAF 265
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 111/268 (41%), Gaps = 19/268 (7%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYL--STEDCDEYHEVAVKILHPVKEDRMRVLLERL 95
I S +K+ IG G FGEV E C VA+K L +R R E L
Sbjct: 13 IDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESC-----VAIKTLKGGYTERQR--REFL 65
Query: 96 NDLFLKCQGVE-GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAI 154
++ + Q I L+G+ + + I+ +F E D +L G+ ++ +
Sbjct: 66 SEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR 125
Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTP 214
+A G+ L + +L N ++N ++ V SSD P +
Sbjct: 126 GIASGMRYLAEMSYVHRDLAARNILVNSN---LVCKVSDFGLSRFLEENSSD-PTETSSL 181
Query: 215 NYMAPEQWQ-PEVRGPISFET--DSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQE 270
P +W PE F + D+W + + E+++ G +P S ++ +A+ +
Sbjct: 182 GGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYR 241
Query: 271 IPPIPSGLPPAVENVLLGCFEYDLRSRP 298
+PP P P ++ ++L C++ D +RP
Sbjct: 242 LPP-PPDCPTSLHQLMLDCWQKDRNARP 268
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 49 LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I +M G P +IY+ +V + PS ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 270 RNLLQVDLTKR 280
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 109/265 (41%), Gaps = 31/265 (11%)
Query: 29 ATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM 88
ATS D I +L IG+G F +V LA H L+ + EVAVKI+ D+
Sbjct: 4 ATSADEQPHI--GNYRLLKTIGKGNFAKVKLARHILTGK------EVAVKII-----DKT 50
Query: 89 RVLLERLNDLF-----LKCQGVEGICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGG 142
++ L LF +K I L + + ++M++ G V D + + G
Sbjct: 51 QLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHG 108
Query: 143 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 202
++ + + H K I+ +LK N +L+ + D
Sbjct: 109 RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF--- 165
Query: 203 XSSDLPRRLGTPNYMAPEQWQ-PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 261
+ L G+P Y APE +Q + GP E D W + +++G P G+++ E+
Sbjct: 166 -GNKLDTFCGSPPYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKEL 221
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVL 286
+ V+R + IP + EN+L
Sbjct: 222 RERVLRGKY--RIPFYMSTDCENLL 244
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 93/232 (40%), Gaps = 21/232 (9%)
Query: 33 DTNAWIKPSAL-KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVL 91
D +A P+ + +L +G G +G+V+ H + + A+K++ V D +
Sbjct: 15 DLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQ------LAAIKVMD-VTGDEEEEI 67
Query: 92 LERLNDLFLKCQGVEGICWLQGISV------INGKICIIMKFY-EGSVGDRMAQLKGGKL 144
+ +N + K I G + ++ ++ ++M+F GSV D + KG L
Sbjct: 68 KQEIN-MLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTL 126
Query: 145 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS 204
+ ++ +G+ LH ++ ++K N +L E L D
Sbjct: 127 KEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRR 186
Query: 205 SDLPRRLGTPNYMAPE--QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRC 254
+ +GTP +MAPE F++D W + IEM G P C
Sbjct: 187 NTF---IGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLC 235
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 109/265 (41%), Gaps = 31/265 (11%)
Query: 29 ATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM 88
ATS D I +L IG+G F +V LA H L+ + EVAVKI+ D+
Sbjct: 4 ATSADEQPHI--GNYRLLKTIGKGNFAKVKLARHILTGK------EVAVKII-----DKT 50
Query: 89 RVLLERLNDLF-----LKCQGVEGICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGG 142
++ L LF +K I L + + ++M++ G V D + + G
Sbjct: 51 QLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHG 108
Query: 143 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 202
++ + + H K I+ +LK N +L+ + D
Sbjct: 109 RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF--- 165
Query: 203 XSSDLPRRLGTPNYMAPEQWQ-PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 261
+ L G+P Y APE +Q + GP E D W + +++G P G+++ E+
Sbjct: 166 -GNKLDTFCGSPPYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKEL 221
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVL 286
+ V+R + IP + EN+L
Sbjct: 222 RERVLRGKY--RIPFYMSTDCENLL 244
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 99/246 (40%), Gaps = 27/246 (10%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP---VKEDRMRVLLERLNDLFLKCQGV 105
IGRG FGEV + +TE A+KIL+ +K E + L V
Sbjct: 98 IGRGAFGEVAVVK-MKNTERI-----YAMKILNKWEMLKRAETACFREERDVL------V 145
Query: 106 EGIC-WLQGISVI---NGKICIIMKFYEGSVGDRMAQLKGGKLSL-SNVFRYAI-DLAQG 159
G C W+ + + ++M +Y G GD + L + L ++ R+ I ++
Sbjct: 146 NGDCQWITALHYAFQDENHLYLVMDYYVG--GDLLTLLSKFEDKLPEDMARFYIGEMVLA 203
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
I +H + ++KP N +L+ L D S + +GTP+Y++P
Sbjct: 204 IDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA--VGTPDYISP 261
Query: 220 EQWQPEVRGPISF--ETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
E Q G + E D W + EML G P S+ E Y ++ +E PS
Sbjct: 262 EILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSH 321
Query: 278 LPPAVE 283
+ E
Sbjct: 322 VTDVSE 327
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 70 LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ + YA + LHS
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 181
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 182 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 232
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 290
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 291 RNLLQVDLTKR 301
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 106/275 (38%), Gaps = 27/275 (9%)
Query: 43 LKLRHRIGRGPFGEVWLA-----THYLSTEDCDEY--HEVAVKILHPVKEDRMRVLLERL 95
L L +IGRG FGEV+ ++ + C E ++ K L +
Sbjct: 116 LVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEAR----------- 164
Query: 96 NDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAID 155
LK I L G+ I I+M+ +G + +G +L + + + D
Sbjct: 165 ---ILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGD 221
Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN 215
A G+ L SK + +L N ++ E + + D +S R++
Sbjct: 222 AAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPV-K 280
Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 274
+ APE G S E+D W F + E + G P S + + V + +P
Sbjct: 281 WTAPEALN---YGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLP-C 336
Query: 275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
P P AV ++ C+ Y+ RP + I + +S
Sbjct: 337 PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQS 371
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 105/275 (38%), Gaps = 27/275 (9%)
Query: 43 LKLRHRIGRGPFGEVWLA-----THYLSTEDCDEY--HEVAVKILHPVKEDRMRVLLERL 95
L L +IGRG FGEV+ ++ + C E ++ K L +
Sbjct: 116 LVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEAR----------- 164
Query: 96 NDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAID 155
LK I L G+ I I+M+ +G + +G +L + + + D
Sbjct: 165 ---ILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGD 221
Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN 215
A G+ L SK + +L N ++ E + + D +S R++
Sbjct: 222 AAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPV-K 280
Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 274
+ APE G S E+D W F + E + G P S + + V + +P
Sbjct: 281 WTAPEALN---YGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLP-C 336
Query: 275 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
P P AV ++ C+ Y+ RP + I + +S
Sbjct: 337 PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQS 371
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 98/246 (39%), Gaps = 27/246 (10%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP---VKEDRMRVLLERLNDLFLKCQGV 105
IGRG FGEV +TE A+KIL+ +K E + L V
Sbjct: 82 IGRGAFGEV-AVVKMKNTERI-----YAMKILNKWEMLKRAETACFREERDVL------V 129
Query: 106 EGIC-WLQGISVI---NGKICIIMKFYEGSVGDRMAQLKGGKLSL-SNVFRYAI-DLAQG 159
G C W+ + + ++M +Y G GD + L + L ++ R+ I ++
Sbjct: 130 NGDCQWITALHYAFQDENHLYLVMDYYVG--GDLLTLLSKFEDKLPEDMARFYIGEMVLA 187
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
I +H + ++KP N +L+ L D S + +GTP+Y++P
Sbjct: 188 IDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA--VGTPDYISP 245
Query: 220 EQWQPEVRGPISF--ETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
E Q G + E D W + EML G P S+ E Y ++ +E PS
Sbjct: 246 EILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSH 305
Query: 278 LPPAVE 283
+ E
Sbjct: 306 VTDVSE 311
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 111/268 (41%), Gaps = 19/268 (7%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYL--STEDCDEYHEVAVKILHPVKEDRMRVLLERL 95
I S +K+ IG G FGEV E C VA+K L +R R E L
Sbjct: 11 IDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESC-----VAIKTLKGGYTERQR--REFL 63
Query: 96 NDLFLKCQGVE-GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAI 154
++ + Q I L+G+ + + I+ +F E D +L G+ ++ +
Sbjct: 64 SEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR 123
Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTP 214
+A G+ L + +L N ++N ++ V SSD P +
Sbjct: 124 GIASGMRYLAEMSYVHRDLAARNILVNSN---LVCKVSDFGLSRFLEENSSD-PTYTSSL 179
Query: 215 NYMAPEQWQ-PEVRGPISFET--DSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQE 270
P +W PE F + D+W + + E+++ G +P S ++ +A+ +
Sbjct: 180 GGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYR 239
Query: 271 IPPIPSGLPPAVENVLLGCFEYDLRSRP 298
+PP P P ++ ++L C++ D +RP
Sbjct: 240 LPP-PPDCPTSLHQLMLDCWQKDRNARP 266
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 49 LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ + YA + LHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 270 RNLLQVDLTKR 280
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 49 LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ + YA + LHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 270 RNLLQVDLTKR 280
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 113/285 (39%), Gaps = 31/285 (10%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLA-THYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLN 96
IK + L+ +G G FG+V+LA H L E + VAVK L E R +R
Sbjct: 9 IKRRDIVLKWELGEGAFGKVFLAECHNLLPE--QDKMLVAVKALKEASES-ARQDFQREA 65
Query: 97 DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG--------------G 142
+L Q + I G+ + ++ ++ +R + G G
Sbjct: 66 ELLTMLQH-QHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG 124
Query: 143 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 202
L L + A +A G++ L + +L N ++ + +GD
Sbjct: 125 PLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDF-----GMSRDI 179
Query: 203 XSSDLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSV 258
S+D R G M P +W P + + E+D W F + E+ T G QP S
Sbjct: 180 YSTDYYRVGG--RTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 237
Query: 259 DEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
E D + + +E+ P PP V ++ GC++ + + R + D+
Sbjct: 238 TEAIDCITQGRELER-PRACPPEVYAIMRGCWQREPQQRHSIKDV 281
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 113/285 (39%), Gaps = 31/285 (10%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLA-THYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLN 96
IK + L+ +G G FG+V+LA H L E + VAVK L E R +R
Sbjct: 38 IKRRDIVLKWELGEGAFGKVFLAECHNLLPE--QDKMLVAVKALKEASES-ARQDFQREA 94
Query: 97 DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG--------------G 142
+L Q + I G+ + ++ ++ +R + G G
Sbjct: 95 ELLTMLQH-QHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG 153
Query: 143 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 202
L L + A +A G++ L + +L N ++ + +GD
Sbjct: 154 PLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDF-----GMSRDI 208
Query: 203 XSSDLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSV 258
S+D R G M P +W P + + E+D W F + E+ T G QP S
Sbjct: 209 YSTDYYRVGG--RTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 266
Query: 259 DEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
E D + + +E+ P PP V ++ GC++ + + R + D+
Sbjct: 267 TEAIDCITQGRELER-PRACPPEVYAIMRGCWQREPQQRHSIKDV 310
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 100/248 (40%), Gaps = 21/248 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 49 LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDL 294
+ DL
Sbjct: 270 RNLLQVDL 277
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + + A+KIL K +++ + LN+ L+
Sbjct: 49 LGTGSFGRVMLVKH---KETGNHF---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 270 RNLLQVDLTKR 280
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + + A+KIL K +++ + LN+ L+
Sbjct: 49 LGTGSFGRVMLVKH---KETGNHF---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 270 RNLLQVDLTKR 280
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 101/251 (40%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + + A+KIL K +++ + LN+ L+
Sbjct: 49 LGTGSFGRVMLVKH---KETGNHF---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 270 RNLLQVDLTKR 280
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 113/285 (39%), Gaps = 31/285 (10%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLA-THYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLN 96
IK + L+ +G G FG+V+LA H L E + VAVK L E R +R
Sbjct: 15 IKRRDIVLKWELGEGAFGKVFLAECHNLLPE--QDKMLVAVKALKEASES-ARQDFQREA 71
Query: 97 DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG--------------G 142
+L Q + I G+ + ++ ++ +R + G G
Sbjct: 72 ELLTMLQH-QHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG 130
Query: 143 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 202
L L + A +A G++ L + +L N ++ + +GD
Sbjct: 131 PLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDF-----GMSRDI 185
Query: 203 XSSDLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSV 258
S+D R G M P +W P + + E+D W F + E+ T G QP S
Sbjct: 186 YSTDYYRVGG--RTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 243
Query: 259 DEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
E D + + +E+ P PP V ++ GC++ + + R + D+
Sbjct: 244 TEAIDCITQGRELER-PRACPPEVYAIMRGCWQREPQQRHSIKDV 287
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 113/267 (42%), Gaps = 26/267 (9%)
Query: 44 KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL--HPVKED--RMRVLLERLNDLF 99
+L IG G F +V LA H L+ E VA+KI+ + + D R++ +E L +L
Sbjct: 13 ELHETIGTGGFAKVKLACHILTGE------MVAIKIMDKNTLGSDLPRIKTEIEALKNL- 65
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDR-MAQLKGGKLSLSNVFRYAIDLA 157
+ IC L + KI +++++ G + D ++Q + + VFR +
Sbjct: 66 ----RHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFR---QIV 118
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 217
+ +HS+G +LKP N + +E + L D L G+ Y
Sbjct: 119 SAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDF--GLCAKPKGNKDYHLQTCCGSLAYA 176
Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
APE Q + + E D W + ++ G P +V +Y ++R + +P
Sbjct: 177 APELIQG--KSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKY--DVPKW 232
Query: 278 LPPAVENVLLGCFEYDLRSRPLMTDIL 304
L P+ +L + D + R M ++L
Sbjct: 233 LSPSSILLLQQMLQVDPKKRISMKNLL 259
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 105/265 (39%), Gaps = 33/265 (12%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK--EDRMRVLLERLNDLFLK---- 101
R+G G +GEV+ S ED Y + + P + +DR R L E + +
Sbjct: 64 RLGHGSYGEVFKVR---SKEDGRLY--AVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPC 118
Query: 102 CQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGIL 161
C +E GI + ++C G + + G L + V+ Y D +
Sbjct: 119 CVRLEQAWEEGGILYLQTELC-------GPSLQQHCEAWGASLPEAQVWGYLRDTLLALA 171
Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
LHS+G++ L++KP N L R LGD + G P YMAPE
Sbjct: 172 HLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEV----QEGDPRYMAPEL 227
Query: 222 WQPEVRGPISFETDSWGFACSIIEMLTGVQ-PRCGRSVDEIYDAVVRRQEIPP-IPSGLP 279
Q G D + +I+E+ ++ P G ++ R+ +PP +GL
Sbjct: 228 LQ----GSYGTAADVFSLGLTILEVACNMELPHGGEGWQQL-----RQGYLPPEFTAGLS 278
Query: 280 PAVENVLLGCFEYDLRSRPLMTDIL 304
+ +VL+ E D + R +L
Sbjct: 279 SELRSVLVMMLEPDPKLRATAEALL 303
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 85/200 (42%), Gaps = 28/200 (14%)
Query: 121 ICIIMKFYEGSVGDRMAQLKGGK----LSLSNVFRYAIDLAQGILQLHS---KGILVLNL 173
+C++M++ EG G L G + + ++ + + +QG+ LHS K ++ +L
Sbjct: 74 VCLVMEYAEG--GSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDL 131
Query: 174 KPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFE 233
KP N +L G V + + G+ +MAPE ++ S +
Sbjct: 132 KPPNLLLVAG-----GTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFE---GSNYSEK 183
Query: 234 TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR------RQEIPPIPSGLPPAVENVLL 287
D + + + E++T +P DEI R PP+ LP +E+++
Sbjct: 184 CDVFSWGIILWEVITRRKP-----FDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMT 238
Query: 288 GCFEYDLRSRPLMTDILRVF 307
C+ D RP M +I+++
Sbjct: 239 RCWSKDPSQRPSMEEIVKIM 258
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 44 LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 97
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ + YA + LHS
Sbjct: 98 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 155
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 156 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 206
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 207 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 264
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 265 RNLLQVDLTKR 275
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 85/200 (42%), Gaps = 28/200 (14%)
Query: 121 ICIIMKFYEGSVGDRMAQLKGGK----LSLSNVFRYAIDLAQGILQLHS---KGILVLNL 173
+C++M++ EG G L G + + ++ + + +QG+ LHS K ++ +L
Sbjct: 75 VCLVMEYAEG--GSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDL 132
Query: 174 KPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFE 233
KP N +L G V + + G+ +MAPE ++ S +
Sbjct: 133 KPPNLLLVAG-----GTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFE---GSNYSEK 184
Query: 234 TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR------RQEIPPIPSGLPPAVENVLL 287
D + + + E++T +P DEI R PP+ LP +E+++
Sbjct: 185 CDVFSWGIILWEVITRRKP-----FDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMT 239
Query: 288 GCFEYDLRSRPLMTDILRVF 307
C+ D RP M +I+++
Sbjct: 240 RCWSKDPSQRPSMEEIVKIM 259
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 115/277 (41%), Gaps = 42/277 (15%)
Query: 42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VLLERLNDLF 99
LKL R+G G FGEVW+ + + + +VAVK L K+ M L N
Sbjct: 10 TLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSL---KQGSMSPDAFLAEAN--L 57
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQ 158
+K + + L + V I II ++ E GS+ D + G KL+++ + A +A+
Sbjct: 58 MKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 116
Query: 159 GILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMA 218
G+ + + + NL+ N ++++ + D L R + Y A
Sbjct: 117 GMAFIEERNYIHRNLRAANILVSDTLSCKIADF--------------GLARLIEDNEYTA 162
Query: 219 ------PEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR 268
P +W PE G + ++D W F + E++T G P G + E+ + R
Sbjct: 163 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 222
Query: 269 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
+ P P + ++ C++ RP D LR
Sbjct: 223 YRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLR 257
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 42 LGTGSFGRVMLVKH---KETGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 95
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ + YA + LHS
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 153
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 154 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 204
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 262
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 263 RNLLQVDLTKR 273
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 49 LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ + YA + LHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 270 RNLLQVDLTKR 280
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 83/205 (40%), Gaps = 13/205 (6%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
IGRG + +V L + + D + + V V +D ++ +F + +
Sbjct: 17 IGRGSYAKVLL----VRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 72
Query: 109 CWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKG 167
L ++ ++++ G GD M + + KL + Y+ +++ + LH +G
Sbjct: 73 VGLHSCFQTESRLFFVIEYVNG--GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 130
Query: 168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVR 227
I+ +LK N +L+ L D +S GTPNY+APE + E
Sbjct: 131 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF---CGTPNYIAPEILRGEDY 187
Query: 228 GPISFETDSWGFACSIIEMLTGVQP 252
G F D W + EM+ G P
Sbjct: 188 G---FSVDWWALGVLMFEMMAGRSP 209
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 50 LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ + YA + LHS
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 161
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 212
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 270
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 271 RNLLQVDLTKR 281
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 109/265 (41%), Gaps = 31/265 (11%)
Query: 29 ATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM 88
ATS D I +L IG+G F +V LA H L+ + EVAV+I+ D+
Sbjct: 4 ATSADEQPHI--GNYRLLKTIGKGNFAKVKLARHILTGK------EVAVRII-----DKT 50
Query: 89 RVLLERLNDLF-----LKCQGVEGICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGG 142
++ L LF +K I L + + ++M++ G V D + + G
Sbjct: 51 QLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHG 108
Query: 143 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 202
++ + + H K I+ +LK N +L+ + D
Sbjct: 109 RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF--- 165
Query: 203 XSSDLPRRLGTPNYMAPEQWQ-PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 261
+ L G+P Y APE +Q + GP E D W + +++G P G+++ E+
Sbjct: 166 -GNKLDEFCGSPPYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKEL 221
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVL 286
+ V+R + IP + EN+L
Sbjct: 222 RERVLRGKY--RIPFYMSTDCENLL 244
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 49 LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ + YA + LHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 270 RNLLQVDLTKR 280
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 108/265 (40%), Gaps = 31/265 (11%)
Query: 29 ATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM 88
ATS D I +L IG+G F +V LA H L+ + EVAVKI+ D+
Sbjct: 4 ATSADEQPHI--GNYRLLKTIGKGNFAKVKLARHILTGK------EVAVKII-----DKT 50
Query: 89 RVLLERLNDLF-----LKCQGVEGICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGG 142
++ L LF +K I L + + ++M++ G V D + + G
Sbjct: 51 QLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHG 108
Query: 143 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 202
++ + + H K I+ +LK N +L+ + D
Sbjct: 109 RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF--- 165
Query: 203 XSSDLPRRLGTPNYMAPEQWQ-PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 261
+ L G P Y APE +Q + GP E D W + +++G P G+++ E+
Sbjct: 166 -GNKLDAFCGAPPYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKEL 221
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVL 286
+ V+R + IP + EN+L
Sbjct: 222 RERVLRGKY--RIPFYMSTDCENLL 244
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 112/288 (38%), Gaps = 23/288 (7%)
Query: 33 DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKEDRMRV 90
D + W P L L +GRG FG+V A + + VAVK+L R
Sbjct: 18 DASKWEFPRDRLNLGKPLGRGAFGQVIEADAF-GIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 91 LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK------- 143
L+ L L + + L + G + +I++F + G+ L+ +
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYK 134
Query: 144 ------LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXX 197
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 135 DLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDI 194
Query: 198 XXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGR 256
RL +MAPE V + ++D W F + E+ + G P G
Sbjct: 195 YKDPDYVRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGV 250
Query: 257 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
+DE + ++ P P + +L C+ + RP ++++
Sbjct: 251 KIDEEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 298
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 83/205 (40%), Gaps = 13/205 (6%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
IGRG + +V L + + D + + V V +D ++ +F + +
Sbjct: 13 IGRGSYAKVLL----VRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 68
Query: 109 CWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKG 167
L ++ ++++ G GD M + + KL + Y+ +++ + LH +G
Sbjct: 69 VGLHSCFQTESRLFFVIEYVNG--GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 126
Query: 168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVR 227
I+ +LK N +L+ L D +S GTPNY+APE + E
Sbjct: 127 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF---CGTPNYIAPEILRGEDY 183
Query: 228 GPISFETDSWGFACSIIEMLTGVQP 252
G F D W + EM+ G P
Sbjct: 184 G---FSVDWWALGVLMFEMMAGRSP 205
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
R+GRG FGEV H + +D + AVK ++R+ + R+ +L + C G+
Sbjct: 65 RVGRGSFGEV----HRM--KDKQTGFQCAVK--------KVRLEVFRVEEL-VACAGLSS 109
Query: 108 --ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLH 164
I L G + I M+ E GS+G + Q+ G L Y +G+ LH
Sbjct: 110 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLH 167
Query: 165 SKGILVLNLKPFNFIL-NEADRAVLGDVXXXXXXXXXXXXSSDLPRRL--GTPNYMAPEQ 221
++ IL ++K N +L ++ RA L D S L GT +MAPE
Sbjct: 168 TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 227
Query: 222 WQPEVRG-PISFETDSWGFACSIIEMLTGVQP 252
V G P + D W C ++ ML G P
Sbjct: 228 ----VMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 49 LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+AP +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAP---AIIL 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 270 RNLLQVDLTKR 280
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 49 LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ + YA + LHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 270 RNLLQVDLTKR 280
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 50 LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ + YA + LHS
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 161
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 212
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 270
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 271 RNLLQVDLTKR 281
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 49 LGTGSFGRVMLVKH---METGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ + YA + LHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP Y+APE +
Sbjct: 161 DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC------GTPEYLAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 270 RNLLQVDLTKR 280
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 83/205 (40%), Gaps = 13/205 (6%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
IGRG + +V L + + D + + V V +D ++ +F + +
Sbjct: 28 IGRGSYAKVLL----VRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 83
Query: 109 CWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKG 167
L ++ ++++ G GD M + + KL + Y+ +++ + LH +G
Sbjct: 84 VGLHSCFQTESRLFFVIEYVNG--GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 141
Query: 168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVR 227
I+ +LK N +L+ L D +S GTPNY+APE + E
Sbjct: 142 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF---CGTPNYIAPEILRGEDY 198
Query: 228 GPISFETDSWGFACSIIEMLTGVQP 252
G F D W + EM+ G P
Sbjct: 199 G---FSVDWWALGVLMFEMMAGRSP 220
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
R+GRG FGEV H + +D + AVK ++R+ + R+ +L + C G+
Sbjct: 81 RVGRGSFGEV----HRM--KDKQTGFQCAVK--------KVRLEVFRVEEL-VACAGLSS 125
Query: 108 --ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLH 164
I L G + I M+ E GS+G + Q+ G L Y +G+ LH
Sbjct: 126 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLH 183
Query: 165 SKGILVLNLKPFNFIL-NEADRAVLGDVXXXXXXXXXXXXSSDLPRRL--GTPNYMAPEQ 221
++ IL ++K N +L ++ RA L D S L GT +MAPE
Sbjct: 184 TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 243
Query: 222 WQPEVRG-PISFETDSWGFACSIIEMLTGVQP 252
V G P + D W C ++ ML G P
Sbjct: 244 ----VMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 83/205 (40%), Gaps = 13/205 (6%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
IGRG + +V L + + D + + V V +D ++ +F + +
Sbjct: 60 IGRGSYAKVLL----VRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 115
Query: 109 CWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKG 167
L ++ ++++ G GD M + + KL + Y+ +++ + LH +G
Sbjct: 116 VGLHSCFQTESRLFFVIEYVNG--GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 173
Query: 168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVR 227
I+ +LK N +L+ L D +S GTPNY+APE + E
Sbjct: 174 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTF---CGTPNYIAPEILRGEDY 230
Query: 228 GPISFETDSWGFACSIIEMLTGVQP 252
G F D W + EM+ G P
Sbjct: 231 G---FSVDWWALGVLMFEMMAGRSP 252
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 79/195 (40%), Gaps = 11/195 (5%)
Query: 127 FYEGSVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 184
F G++ + + +LK G L+ + + + +G+ +H+KG +LKP N +L +
Sbjct: 112 FKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEG 171
Query: 185 RAVLGDVXXXXXXXXXXXXS------SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWG 238
+ VL D+ S D + T +Y APE + + I TD W
Sbjct: 172 QPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWS 231
Query: 239 FACSIIEMLTGVQP--RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 296
C + M+ G P + D + AV + IP P A+ +L D
Sbjct: 232 LGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRH-SSALWQLLNSMMTVDPHQ 290
Query: 297 RPLMTDILRVFKSSQ 311
RP + +L ++ Q
Sbjct: 291 RPHIPLLLSQLEALQ 305
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 115/290 (39%), Gaps = 25/290 (8%)
Query: 33 DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKEDRMRV 90
D + W P LKL +GRG FG+V A + + VAVK+L R
Sbjct: 20 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATXRTVAVKMLKEGATHSEHRA 78
Query: 91 LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK------- 143
L+ L L + + L + G + +I++F + G+ L+ +
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYK 136
Query: 144 --------LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXX 195
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 137 PEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLAR 196
Query: 196 XXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRC 254
RL +MAPE V + ++D W F + E+ + G P
Sbjct: 197 DIXKDPDXVRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYP 252
Query: 255 GRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
G +DE + ++ P P + +L C+ + RP ++++
Sbjct: 253 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 103/265 (38%), Gaps = 27/265 (10%)
Query: 37 WIKPSALKLR----HR--------IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK 84
W KP K++ HR IGRG FGEV + + ++ D+ A+KIL+ +
Sbjct: 58 WAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAV----VKLKNADKV--FAMKILNKWE 111
Query: 85 E-DRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-- 141
R R L + I L + + ++M +Y G GD + L
Sbjct: 112 MLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVG--GDLLTLLSKFE 169
Query: 142 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 201
+L Y ++ I +H + ++KP N +++ L D
Sbjct: 170 DRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 229
Query: 202 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISF--ETDSWGFACSIIEMLTGVQPRCGRSVD 259
S + +GTP+Y++PE Q G + E D W + EML G P S+
Sbjct: 230 TVQSSVA--VGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV 287
Query: 260 EIYDAVVRRQEIPPIPSGLPPAVEN 284
E Y ++ +E P+ + EN
Sbjct: 288 ETYGKIMNHKERFQFPTQVTDVSEN 312
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 109/265 (41%), Gaps = 31/265 (11%)
Query: 29 ATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM 88
ATS D I +L IG+G F +V LA H L+ + EVAV+I+ D+
Sbjct: 4 ATSADEQPHI--GNYRLLKTIGKGNFAKVKLARHILTGK------EVAVRII-----DKT 50
Query: 89 RVLLERLNDLF-----LKCQGVEGICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGG 142
++ L LF +K I L + + ++M++ G V D + + G
Sbjct: 51 QLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHG 108
Query: 143 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 202
++ + + H K I+ +LK N +L+ + D
Sbjct: 109 RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF--- 165
Query: 203 XSSDLPRRLGTPNYMAPEQWQ-PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 261
+ L G+P Y APE +Q + GP E D W + +++G P G+++ E+
Sbjct: 166 -GNKLDTFCGSPPYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKEL 221
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVL 286
+ V+R + IP + EN+L
Sbjct: 222 RERVLRGKY--RIPFYMSTDCENLL 244
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 101/253 (39%), Gaps = 25/253 (9%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
+G G FG V L H E + Y A+KIL K +++ + LN+ + Q
Sbjct: 50 LGTGSFGRVMLVKH---KETGNHY---AMKILDKQKVVKLKQIEHTLNEK--RIQQAVNF 101
Query: 109 CWLQGISVI---NGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLH 164
+L + N + +++++ G G+ + L+ G+ S + YA + LH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 165 SKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQP 224
S ++ +LKP N ++++ + D GTP Y+APE
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC------GTPEYLAPEII-- 211
Query: 225 EVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVEN 284
+ + D W I EM G P +IY+ +V + PS +++
Sbjct: 212 -LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKD 268
Query: 285 VLLGCFEYDLRSR 297
+L + DL R
Sbjct: 269 LLRNLLQVDLTKR 281
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
R+GRG FGEV H + +D + AVK ++R+ + R+ +L + C G+
Sbjct: 79 RLGRGSFGEV----HRM--KDKQTGFQCAVK--------KVRLEVFRVEEL-VACAGLSS 123
Query: 108 --ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLH 164
I L G + I M+ E GS+G + Q+ G L Y +G+ LH
Sbjct: 124 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLH 181
Query: 165 SKGILVLNLKPFNFIL-NEADRAVLGDVXXXXXXXXXXXXSSDLPRRL--GTPNYMAPEQ 221
++ IL ++K N +L ++ RA L D S L GT +MAPE
Sbjct: 182 TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 241
Query: 222 WQPEVRG-PISFETDSWGFACSIIEMLTGVQP 252
V G P + D W C ++ ML G P
Sbjct: 242 ----VMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 118/285 (41%), Gaps = 43/285 (15%)
Query: 35 NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VL 91
+ W P LKL R+G G FGEVW+ + + + +VAVK L K+ M
Sbjct: 16 DEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSL---KQGSMSPDAF 65
Query: 92 LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVF 150
L N +K + + L + V I II ++ E GS+ D + G KL+++ +
Sbjct: 66 LAEAN--LMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL 122
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
A +A+G+ + + + +L+ N ++++ + D L R
Sbjct: 123 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF--------------GLARL 168
Query: 211 LGTPNYMA------PEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDE 260
+ Y A P +W PE G + ++D W F + E++T G P G + E
Sbjct: 169 IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 228
Query: 261 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
+ + R + P P + ++ C++ RP D LR
Sbjct: 229 VIQNLERGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLR 271
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
YA ++ G+ LH + I+ +LKP N +L++ + D+ + R+
Sbjct: 291 YAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDL----GLAVHVPEGQTIKGRV 346
Query: 212 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
GT YMAPE + E +F D W C + EM+ G P
Sbjct: 347 GTVGYMAPEVVKNER---YTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 100/261 (38%), Gaps = 18/261 (6%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
+G+G +G V+ + D +A+K + P ++ R L L + +
Sbjct: 16 LGKGTYGIVY------AGRDLSNQVRIAIKEI-PERDSRYSQPLHEEIALHKHLKHKNIV 68
Query: 109 CWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKL--SLSNVFRYAIDLAQGILQLHSK 166
+L S NG I I M+ G + + K G L + + Y + +G+ LH
Sbjct: 69 QYLGSFSE-NGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN 127
Query: 167 GILVLNLKPFNFILNEADRAV-LGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPE 225
I+ ++K N ++N + + D + GT YMAPE
Sbjct: 128 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF---TGTLQYMAPEIIDKG 184
Query: 226 VRGPISFETDSWGFACSIIEMLTGVQP--RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE 283
RG D W C+IIEM TG P G ++ + + P IP + +
Sbjct: 185 PRG-YGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVH-PEIPESMSAEAK 242
Query: 284 NVLLGCFEYDLRSRPLMTDIL 304
+L CFE D R D+L
Sbjct: 243 AFILKCFEPDPDKRACANDLL 263
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 74/192 (38%), Gaps = 10/192 (5%)
Query: 118 NGKICIIMKFYEGSVGDRMAQLKGGKL--SLSNVFRYAIDLAQGILQLHSKGILVLNLKP 175
NG I I M+ G + + K G L + + Y + +G+ LH I+ ++K
Sbjct: 91 NGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKG 150
Query: 176 FNFILNEADRAV-LGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFET 234
N ++N + + D + GT YMAPE RG
Sbjct: 151 DNVLINTYSGVLKISDFGTSKRLAGINPCTETF---TGTLQYMAPEIIDKGPRG-YGKAA 206
Query: 235 DSWGFACSIIEMLTGVQP--RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 292
D W C+IIEM TG P G ++ + + P IP + + +L CFE
Sbjct: 207 DIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVH-PEIPESMSAEAKAFILKCFEP 265
Query: 293 DLRSRPLMTDIL 304
D R D+L
Sbjct: 266 DPDKRACANDLL 277
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 102/260 (39%), Gaps = 36/260 (13%)
Query: 49 IGRGPFGEV----------WLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL 98
+G+G FG+V + A L E EVA H V E R +L+
Sbjct: 16 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA----HTVTESR---VLQNTRHP 68
Query: 99 FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR-YAIDLA 157
FL L+ + ++C +M++ G G+ L ++ R Y ++
Sbjct: 69 FLTA--------LKYAFQTHDRLCFVMEYANG--GELFFHLSRERVFTEERARFYGAEIV 118
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 217
+ LHS+ ++ ++K N +L++ + D + + GTP Y+
Sbjct: 119 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKTFCGTPEYL 175
Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
APE + G D WG + EM+ G P + + +++ ++ E P
Sbjct: 176 APEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFPRT 230
Query: 278 LPPAVENVLLGCFEYDLRSR 297
L P +++L G + D + R
Sbjct: 231 LSPEAKSLLAGLLKKDPKQR 250
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
YA ++ G+ LH + I+ +LKP N +L++ + D+ + R+
Sbjct: 291 YAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDL----GLAVHVPEGQTIKGRV 346
Query: 212 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
GT YMAPE + E +F D W C + EM+ G P
Sbjct: 347 GTVGYMAPEVVKNER---YTFSPDWWALGCLLYEMIAGQSP 384
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 102/260 (39%), Gaps = 36/260 (13%)
Query: 49 IGRGPFGEV----------WLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL 98
+G+G FG+V + A L E EVA H V E R +L+
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA----HTVTESR---VLQNTRHP 65
Query: 99 FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR-YAIDLA 157
FL L+ + ++C +M++ G G+ L ++ R Y ++
Sbjct: 66 FLTA--------LKYAFQTHDRLCFVMEYANG--GELFFHLSRERVFTEERARFYGAEIV 115
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 217
+ LHS+ ++ ++K N +L++ + D + + GTP Y+
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKTFCGTPEYL 172
Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
APE + G D WG + EM+ G P + + +++ ++ E P
Sbjct: 173 APEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFPRT 227
Query: 278 LPPAVENVLLGCFEYDLRSR 297
L P +++L G + D + R
Sbjct: 228 LSPEAKSLLAGLLKKDPKQR 247
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 118/285 (41%), Gaps = 43/285 (15%)
Query: 35 NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VL 91
+ W P LKL R+G G FGEVW+ + + + +VAVK L K+ M
Sbjct: 11 DEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSL---KQGSMSPDAF 60
Query: 92 LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVF 150
L N +K + + L + V I II ++ E GS+ D + G KL+++ +
Sbjct: 61 LAEAN--LMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL 117
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
A +A+G+ + + + +L+ N ++++ + D L R
Sbjct: 118 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF--------------GLARL 163
Query: 211 LGTPNYMA------PEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDE 260
+ Y A P +W PE G + ++D W F + E++T G P G + E
Sbjct: 164 IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 223
Query: 261 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
+ + R + P P + ++ C++ RP D LR
Sbjct: 224 VIQNLERGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLR 266
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 102/260 (39%), Gaps = 36/260 (13%)
Query: 49 IGRGPFGEV----------WLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL 98
+G+G FG+V + A L E EVA H V E R +L+
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA----HTVTESR---VLQNTRHP 65
Query: 99 FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR-YAIDLA 157
FL L+ + ++C +M++ G G+ L ++ R Y ++
Sbjct: 66 FLTA--------LKYAFQTHDRLCFVMEYANG--GELFFHLSRERVFTEERARFYGAEIV 115
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 217
+ LHS+ ++ ++K N +L++ + D + + GTP Y+
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKTFCGTPEYL 172
Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
APE + G D WG + EM+ G P + + +++ ++ E P
Sbjct: 173 APEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFPRT 227
Query: 278 LPPAVENVLLGCFEYDLRSR 297
L P +++L G + D + R
Sbjct: 228 LSPEAKSLLAGLLKKDPKQR 247
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 102/260 (39%), Gaps = 36/260 (13%)
Query: 49 IGRGPFGEV----------WLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL 98
+G+G FG+V + A L E EVA H V E R +L+
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA----HTVTESR---VLQNTRHP 65
Query: 99 FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR-YAIDLA 157
FL L+ + ++C +M++ G G+ L ++ R Y ++
Sbjct: 66 FLTA--------LKYAFQTHDRLCFVMEYANG--GELFFHLSRERVFTEERARFYGAEIV 115
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 217
+ LHS+ ++ ++K N +L++ + D + + GTP Y+
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKXFCGTPEYL 172
Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
APE + G D WG + EM+ G P + + +++ ++ E P
Sbjct: 173 APEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFPRT 227
Query: 278 LPPAVENVLLGCFEYDLRSR 297
L P +++L G + D + R
Sbjct: 228 LSPEAKSLLAGLLKKDPKQR 247
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 102/260 (39%), Gaps = 36/260 (13%)
Query: 49 IGRGPFGEV----------WLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL 98
+G+G FG+V + A L E EVA H V E R +L+
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA----HTVTESR---VLQNTRHP 65
Query: 99 FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR-YAIDLA 157
FL L+ + ++C +M++ G G+ L ++ R Y ++
Sbjct: 66 FLTA--------LKYAFQTHDRLCFVMEYANG--GELFFHLSRERVFTEERARFYGAEIV 115
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 217
+ LHS+ ++ ++K N +L++ + D + + GTP Y+
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKXFCGTPEYL 172
Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
APE + G D WG + EM+ G P + + +++ ++ E P
Sbjct: 173 APEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFPRT 227
Query: 278 LPPAVENVLLGCFEYDLRSR 297
L P +++L G + D + R
Sbjct: 228 LSPEAKSLLAGLLKKDPKQR 247
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 21/251 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND-LFLKCQGVEG 107
+G G FG V L H E + Y A+KIL K +++ + LN+ L+
Sbjct: 49 LGTGSFGRVMLVKH---KESGNHY---AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
+ L+ N + ++M++ G G+ + L+ G+ S + YA + LHS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N ++++ + D GTP +APE +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC------GTPEALAPEII---L 211
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W I EM G P +IY+ +V + PS ++++L
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDLL 269
Query: 287 LGCFEYDLRSR 297
+ DL R
Sbjct: 270 RNLLQVDLTKR 280
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 86/229 (37%), Gaps = 13/229 (5%)
Query: 39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL 98
K K+ + +G+G F V+ A E EVA+K++ + ++ N++
Sbjct: 9 KIEDFKVGNLLGKGSFAGVYRA------ESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEV 62
Query: 99 FLKCQGVE-GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLA 157
+ CQ I L + + ++++ +R + + S + + +
Sbjct: 63 KIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQII 122
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 217
G+L LHS GIL +L N +L + D L GTPNY+
Sbjct: 123 TGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTL---CGTPNYI 179
Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVV 266
+PE G E+D W C +L G P +V + VV
Sbjct: 180 SPEIATRSAHG---LESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV 225
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 118/285 (41%), Gaps = 43/285 (15%)
Query: 35 NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VL 91
+ W P LKL R+G G FGEVW+ + + + +VAVK L K+ M
Sbjct: 1 DEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSL---KQGSMSPDAF 50
Query: 92 LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVF 150
L N +K + + L + V I II ++ E GS+ D + G KL+++ +
Sbjct: 51 LAEAN--LMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL 107
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
A +A+G+ + + + +L+ N ++++ + D L R
Sbjct: 108 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF--------------GLARL 153
Query: 211 LGTPNYMA------PEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDE 260
+ Y A P +W PE G + ++D W F + E++T G P G + E
Sbjct: 154 IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 213
Query: 261 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
+ + R + P P + ++ C++ RP D LR
Sbjct: 214 VIQNLERGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLR 256
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 118/285 (41%), Gaps = 43/285 (15%)
Query: 35 NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VL 91
+ W P LKL R+G G FGEVW+ + + + +VAVK L K+ M
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSL---KQGSMSPDAF 61
Query: 92 LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVF 150
L N +K + + L + V I II ++ E GS+ D + G KL+++ +
Sbjct: 62 LAEAN--LMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL 118
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
A +A+G+ + + + +L+ N ++++ + D L R
Sbjct: 119 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF--------------GLARL 164
Query: 211 LGTPNYMA------PEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDE 260
+ Y A P +W PE G + ++D W F + E++T G P G + E
Sbjct: 165 IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 224
Query: 261 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
+ + R + P P + ++ C++ RP D LR
Sbjct: 225 VIQNLERGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLR 267
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 118/285 (41%), Gaps = 43/285 (15%)
Query: 35 NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VL 91
+ W P LKL R+G G FGEVW+ + + + +VAVK L K+ M
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSL---KQGSMSPDAF 55
Query: 92 LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVF 150
L N +K + + L + V I II ++ E GS+ D + G KL+++ +
Sbjct: 56 LAEAN--LMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL 112
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
A +A+G+ + + + +L+ N ++++ + D L R
Sbjct: 113 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF--------------GLARL 158
Query: 211 LGTPNYMA------PEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDE 260
+ Y A P +W PE G + ++D W F + E++T G P G + E
Sbjct: 159 IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 218
Query: 261 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
+ + R + P P + ++ C++ RP D LR
Sbjct: 219 VIQNLERGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLR 261
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 102/260 (39%), Gaps = 36/260 (13%)
Query: 49 IGRGPFGEV----------WLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL 98
+G+G FG+V + A L E EVA H V E R +L+
Sbjct: 18 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA----HTVTESR---VLQNTRHP 70
Query: 99 FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR-YAIDLA 157
FL L+ + ++C +M++ G G+ L ++ R Y ++
Sbjct: 71 FLTA--------LKYAFQTHDRLCFVMEYANG--GELFFHLSRERVFTEERARFYGAEIV 120
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 217
+ LHS+ ++ ++K N +L++ + D + + GTP Y+
Sbjct: 121 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKXFCGTPEYL 177
Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
APE + G D WG + EM+ G P + + +++ ++ E P
Sbjct: 178 APEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFPRT 232
Query: 278 LPPAVENVLLGCFEYDLRSR 297
L P +++L G + D + R
Sbjct: 233 LSPEAKSLLAGLLKKDPKQR 252
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 102/258 (39%), Gaps = 20/258 (7%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE-RLNDLFLKCQGVEG 107
+G G FG+V + H L+ H+VAVKIL+ K + V+ + R LK
Sbjct: 24 LGVGTFGKVKVGKHELTG------HKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPH 77
Query: 108 ICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L + I ++M++ G + D + K G+L R + G+ H
Sbjct: 78 IIKLYQVISTPSDIFMVMEYVSGGELFDYIC--KNGRLDEKESRRLFQQILSGVDYCHRH 135
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N +L+ A + D L G+PNY APE +
Sbjct: 136 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF----LRXSCGSPNYAAPEVISGRL 191
Query: 227 R-GPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
GP E D W + +L G P V ++ + I P L P+V ++
Sbjct: 192 YAGP---EVDIWSSGVILYALLCGTLPFDDDHVPTLFKKIC--DGIFYTPQYLNPSVISL 246
Query: 286 LLGCFEYDLRSRPLMTDI 303
L + D R + DI
Sbjct: 247 LKHMLQVDPMKRATIKDI 264
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 108/267 (40%), Gaps = 22/267 (8%)
Query: 45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQG 104
+ ++G G FG+V L +E +++ + +DR +V +E++ +
Sbjct: 26 FKRKLGSGAFGDVHLV---------EERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKS 76
Query: 105 VEGICWLQGISVING--KICIIMKFYEG-SVGDRM--AQLKGGKLSLSNVFRYAIDLAQG 159
++ ++ V + I+M+ EG + +R+ AQ +G LS V +
Sbjct: 77 LDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNA 136
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL-GTPNYMA 218
+ HS+ ++ +LKP N + D + + S + GT YMA
Sbjct: 137 LAYFHSQHVVHKDLKPENILFQ--DTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMA 194
Query: 219 PEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG- 277
PE ++ +V +F+ D W + +LTG P G S++E+ ++ +
Sbjct: 195 PEVFKRDV----TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP 250
Query: 278 LPPAVENVLLGCFEYDLRSRPLMTDIL 304
L P ++L D RP +L
Sbjct: 251 LTPQAVDLLKQMLTKDPERRPSAAQVL 277
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 118/288 (40%), Gaps = 32/288 (11%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR----MRVLLERLNDL 98
LK +G G FG+V L + ++ E +VAVK L P ++ +E L +L
Sbjct: 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGE--QVAVKSLKPESGGNHIADLKKEIEILRNL 80
Query: 99 FLKCQGVEGICWLQGISVINGK--ICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAID 155
+ E I +GI +G I +IM+F GS+ + + + K K++L +YA+
Sbjct: 81 YH-----ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN-KINLKQQLKYAVQ 134
Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN 215
+ +G+ L S+ + +L N ++ + +GD + R
Sbjct: 135 ICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVF 194
Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLT--------------GVQPRCGRSVDEI 261
+ APE ++ +D W F ++ E+LT + P G+
Sbjct: 195 WYAPECL---MQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTR 251
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
++ + P P P V ++ C+E+ +R +++ F++
Sbjct: 252 LVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEA 299
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 102/260 (39%), Gaps = 36/260 (13%)
Query: 49 IGRGPFGEV----------WLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL 98
+G+G FG+V + A L E EVA H V E R +L+
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA----HTVTESR---VLQNTRHP 65
Query: 99 FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR-YAIDLA 157
FL L+ + ++C +M++ G G+ L ++ R Y ++
Sbjct: 66 FLTA--------LKYAFQTHDRLCFVMEYANG--GELFFHLSRERVFTEERARFYGAEIV 115
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 217
+ LHS+ ++ ++K N +L++ + D + + GTP Y+
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKXFCGTPEYL 172
Query: 218 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 277
APE + G D WG + EM+ G P + + +++ ++ E P
Sbjct: 173 APEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFPRT 227
Query: 278 LPPAVENVLLGCFEYDLRSR 297
L P +++L G + D + R
Sbjct: 228 LSPEAKSLLAGLLKKDPKQR 247
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 17/167 (10%)
Query: 118 NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPF 176
+G+I I M+ +G D++ + K G++ + + +I + +G+ L K I+ ++KP
Sbjct: 95 DGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPS 153
Query: 177 NFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDS 236
N ++N L D S +GT +YM+PE+ Q S ++D
Sbjct: 154 NILVNSRGEIKLCDFGVSGQLIDSMANSF-----VGTRSYMSPERLQGT---HYSVQSDI 205
Query: 237 WGFACSIIEMLTGVQP----RCGRSVDEIYDAVVRRQEIPP-IPSGL 278
W S++EM G P ++ E+ D +V E PP +PSG+
Sbjct: 206 WSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIV--NEPPPKLPSGV 250
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 118/288 (40%), Gaps = 32/288 (11%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR----MRVLLERLNDL 98
LK +G G FG+V L + ++ E +VAVK L P ++ +E L +L
Sbjct: 11 LKRIRDLGEGHFGKVELCRYDPEGDNTGE--QVAVKSLKPESGGNHIADLKKEIEILRNL 68
Query: 99 FLKCQGVEGICWLQGISVINGK--ICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAID 155
+ E I +GI +G I +IM+F GS+ + + + K K++L +YA+
Sbjct: 69 YH-----ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN-KINLKQQLKYAVQ 122
Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN 215
+ +G+ L S+ + +L N ++ + +GD + R
Sbjct: 123 ICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVF 182
Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLT--------------GVQPRCGRSVDEI 261
+ APE ++ +D W F ++ E+LT + P G+
Sbjct: 183 WYAPECL---MQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTR 239
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
++ + P P P V ++ C+E+ +R +++ F++
Sbjct: 240 LVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEA 287
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 104/251 (41%), Gaps = 31/251 (12%)
Query: 44 KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLF---- 99
+L IG+G F +V LA H L+ EVA+KI+ D+ ++ L LF
Sbjct: 15 RLLKTIGKGNFAKVKLARHILTG------REVAIKII-----DKTQLNPTSLQKLFREVR 63
Query: 100 -LKCQGVEGICWLQGISVINGKICIIMKFYEG-SVGDRM-AQLKGGKLSLSNVFRYAIDL 156
+K I L + + +IM++ G V D + A + + + FR +
Sbjct: 64 IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSA 123
Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNY 216
Q H K I+ +LK N +L+ + D L G+P Y
Sbjct: 124 VQ---YCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV----GGKLDTFCGSPPY 176
Query: 217 MAPEQWQ-PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 275
APE +Q + GP E D W + +++G P G+++ E+ + V+R + IP
Sbjct: 177 AAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY--RIP 231
Query: 276 SGLPPAVENVL 286
+ EN+L
Sbjct: 232 FYMSTDCENLL 242
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 90/229 (39%), Gaps = 40/229 (17%)
Query: 39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMR 89
+P K +G G F V LA ++ E A+KIL H +KE+ R R
Sbjct: 7 RPEDFKFGKILGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRER 60
Query: 90 VLLERLN-----DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGK 143
++ RL+ L+ Q E + + G+S NG++ ++ K G
Sbjct: 61 DVMSRLDHPFFVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGS 105
Query: 144 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 203
+ Y ++ + LH KGI+ +LKP N +LNE + D
Sbjct: 106 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 165
Query: 204 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
+ +GT Y++PE + S D W C I +++ G+ P
Sbjct: 166 AR-ANXFVGTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 210
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 99/237 (41%), Gaps = 28/237 (11%)
Query: 44 KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLF---- 99
+L+ IG+G F +V LA H L+ EVAVKI+ D+ ++ L LF
Sbjct: 18 RLQKTIGKGNFAKVKLARHVLTG------REVAVKII-----DKTQLNPTSLQKLFREVR 66
Query: 100 -LKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLA 157
+K I L + + ++M++ G V D + + G++ +
Sbjct: 67 IMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHGRMKEKEARAKFRQIV 124
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 217
+ H K I+ +LK N +L+ + D + L G+P Y
Sbjct: 125 SAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADF----GFSNEFTVGNKLDTFCGSPPYA 180
Query: 218 APEQWQ-PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR-RQEIP 272
APE +Q + GP E D W + +++G P G+++ E+ + V+R + IP
Sbjct: 181 APELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 234
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 90/229 (39%), Gaps = 40/229 (17%)
Query: 39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMR 89
+P K +G G F V LA ++ E A+KIL H +KE+ R R
Sbjct: 5 RPEDFKFGKILGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRER 58
Query: 90 VLLERLN-----DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGK 143
++ RL+ L+ Q E + + G+S NG++ ++ K G
Sbjct: 59 DVMSRLDHPFFVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGS 103
Query: 144 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 203
+ Y ++ + LH KGI+ +LKP N +LNE + D
Sbjct: 104 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 163
Query: 204 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
+ +GT Y++PE + S D W C I +++ G+ P
Sbjct: 164 AR-ANXFVGTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 208
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 90/229 (39%), Gaps = 40/229 (17%)
Query: 39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMR 89
+P K +G G F V LA ++ E A+KIL H +KE+ R R
Sbjct: 6 RPEDFKFGKILGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRER 59
Query: 90 VLLERLN-----DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGK 143
++ RL+ L+ Q E + + G+S NG++ ++ K G
Sbjct: 60 DVMSRLDHPFFVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGS 104
Query: 144 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 203
+ Y ++ + LH KGI+ +LKP N +LNE + D
Sbjct: 105 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 164
Query: 204 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
+ +GT Y++PE + S D W C I +++ G+ P
Sbjct: 165 AR-ANXFVGTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 209
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 113/292 (38%), Gaps = 27/292 (9%)
Query: 33 DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKEDRMRV 90
D + W P LKL +GRG FG+V A + + VAVK+L R
Sbjct: 20 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRA 78
Query: 91 LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK------- 143
L+ L L + + L + G + +I++F + G+ L+ +
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYK 136
Query: 144 ----------LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 137 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 196
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQP 252
RL +MAPE V + ++D W F + E+ + G P
Sbjct: 197 ARDIYKDPDYVRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASP 252
Query: 253 RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
G +DE + ++ P P + +L C+ + RP ++++
Sbjct: 253 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 304
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 115/292 (39%), Gaps = 27/292 (9%)
Query: 33 DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKEDRMRV 90
D + W P LKL +GRG FG+V A + + VAVK+L R
Sbjct: 9 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 91 LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK------- 143
L+ L L + + L + G + +I++F + G+ L+ +
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYK 125
Query: 144 ----------LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQP 252
RL +MAPE V + ++D W F + E+ + G P
Sbjct: 186 ARDIXKDPDXVRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASP 241
Query: 253 RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
G +DE + ++ P P + +L C+ + RP ++++
Sbjct: 242 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 293
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 90/229 (39%), Gaps = 40/229 (17%)
Query: 39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMR 89
+P K +G G F V LA ++ E A+KIL H +KE+ R R
Sbjct: 8 RPEDFKFGKILGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRER 61
Query: 90 VLLERLN-----DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGK 143
++ RL+ L+ Q E + + G+S NG++ ++ K G
Sbjct: 62 DVMSRLDHPFFVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGS 106
Query: 144 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 203
+ Y ++ + LH KGI+ +LKP N +LNE + D
Sbjct: 107 FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 166
Query: 204 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
+ +GT Y++PE + S D W C I +++ G+ P
Sbjct: 167 AR-ANXFVGTAQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 211
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 109/275 (39%), Gaps = 23/275 (8%)
Query: 43 LKLRHRIGRGPFGEVWLATHY-LSTEDCDEYHEVAVKILHPVKE-DRMRVLLERLNDLFL 100
L+ +G G FG+V AT + L ED +VAVK+L D L+ L +
Sbjct: 40 LQFGKTLGAGAFGKVVEATAFGLGKEDA--VLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 101 KCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLK-----------GGKLSLSNV 149
Q E I L G G + +I ++ GD + L+ G L L ++
Sbjct: 98 LGQH-ENIVNLLGACTHGGPVLVITEY--CCYGDLLNFLRRKAEADLDKEDGRPLELRDL 154
Query: 150 FRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPR 209
++ +AQG+ L SK + ++ N +L A +GD
Sbjct: 155 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 214
Query: 210 RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR 268
RL +MAPE V + ++D W + + E+ + G+ P G V+ + +V+
Sbjct: 215 RLPV-KWMAPESIFDCV---YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD 270
Query: 269 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
P+ P + +++ C+ + RP I
Sbjct: 271 GYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 305
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 13/175 (7%)
Query: 121 ICIIMKFYEGSVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNF 178
+ ++M++Y G GD + L G ++ Y ++ I +H G + ++KP N
Sbjct: 136 LYLVMEYYVG--GDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNI 193
Query: 179 ILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISF----ET 234
+L+ L D S + +GTP+Y++PE Q GP + E
Sbjct: 194 LLDRCGHIRLADFGSCLKLRADGTVRSLVA--VGTPDYLSPEILQAVGGGPGTGSYGPEC 251
Query: 235 DSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE---IPPIPSGLPPAVENVL 286
D W EM G P S E Y +V +E +P + G+P + +
Sbjct: 252 DWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFI 306
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 112/288 (38%), Gaps = 23/288 (7%)
Query: 33 DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKEDRMRV 90
D + W P L L +GRG FG+V A + + VAVK+L R
Sbjct: 18 DASKWEFPRDRLNLGKPLGRGAFGQVIEADAF-GIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 91 LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK------- 143
L+ L L + + L + G + +I++F + G+ L+ +
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYK 134
Query: 144 ------LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXX 197
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 135 DLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDI 194
Query: 198 XXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGR 256
RL +MAPE V + ++D W F + E+ + G P G
Sbjct: 195 YKDPDYVRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGV 250
Query: 257 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
+DE + ++ P P + +L C+ + RP ++++
Sbjct: 251 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 298
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 112/292 (38%), Gaps = 27/292 (9%)
Query: 33 DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKEDRMRV 90
D + W P LKL +GRG FG+V A + + VAVK+L R
Sbjct: 9 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 91 LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK------- 143
L+ L L + + L + G + +I +F + G+ L+ +
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCK--FGNLSTYLRSKRNEFVPYK 125
Query: 144 ----------LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQP 252
RL +MAPE V + ++D W F + E+ + G P
Sbjct: 186 ARDIYKDPDYVRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASP 241
Query: 253 RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
G +DE + ++ P P + +L C+ + RP ++++
Sbjct: 242 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 293
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 115/292 (39%), Gaps = 27/292 (9%)
Query: 33 DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKEDRMRV 90
D + W P LKL +GRG FG+V A + + VAVK+L R
Sbjct: 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 91 LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK------- 143
L+ L L + + L + G + +I++F + G+ L+ +
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYK 134
Query: 144 ----------LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 194
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQP 252
RL +MAPE V + ++D W F + E+ + G P
Sbjct: 195 ARDIXKDPDXVRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASP 250
Query: 253 RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
G +DE + ++ P P + +L C+ + RP ++++
Sbjct: 251 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 109/275 (39%), Gaps = 23/275 (8%)
Query: 43 LKLRHRIGRGPFGEVWLATHY-LSTEDCDEYHEVAVKILHPVKE-DRMRVLLERLNDLFL 100
L+ +G G FG+V AT + L ED +VAVK+L D L+ L +
Sbjct: 48 LQFGKTLGAGAFGKVVEATAFGLGKEDA--VLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 101 KCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLK-----------GGKLSLSNV 149
Q E I L G G + +I ++ GD + L+ G L L ++
Sbjct: 106 LGQH-ENIVNLLGACTHGGPVLVITEY--CCYGDLLNFLRRKAEADLDKEDGRPLELRDL 162
Query: 150 FRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPR 209
++ +AQG+ L SK + ++ N +L A +GD
Sbjct: 163 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 222
Query: 210 RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR 268
RL +MAPE V + ++D W + + E+ + G+ P G V+ + +V+
Sbjct: 223 RLPV-KWMAPESIFDCV---YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD 278
Query: 269 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
P+ P + +++ C+ + RP I
Sbjct: 279 GYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 313
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 113/292 (38%), Gaps = 27/292 (9%)
Query: 33 DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKEDRMRV 90
D + W P LKL +GRG FG+V A + + VAVK+L R
Sbjct: 55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRA 113
Query: 91 LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK------- 143
L+ L L + + L + G + +I++F + G+ L+ +
Sbjct: 114 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYK 171
Query: 144 ----------LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 172 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 231
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQP 252
RL +MAPE V + ++D W F + E+ + G P
Sbjct: 232 ARDIYKDPDYVRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASP 287
Query: 253 RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
G +DE + ++ P P + +L C+ + RP ++++
Sbjct: 288 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 339
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 23/183 (12%)
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK- 166
I G +G+I I M+ +G D++ + K G++ + + +I + +G+ L K
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
I+ ++KP N ++N L D S +GT +YM+PE+ Q
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF-----VGTRSYMSPERLQ--- 176
Query: 227 RGPISFETDSWGFACSIIEMLTGVQP----------RCGRSVDEIYDAVVRRQEIPP-IP 275
S ++D W S++EM G P R ++ E+ D +V E PP +P
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIV--NEPPPKLP 234
Query: 276 SGL 278
SG+
Sbjct: 235 SGV 237
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 114/292 (39%), Gaps = 27/292 (9%)
Query: 33 DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKEDRMRV 90
D + W P LKL +GRG FG+V A + + VAVK+L R
Sbjct: 9 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 91 LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK------- 143
L+ L L + + L + G + +I +F + G+ L+ +
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCK--FGNLSTYLRSKRNEFVPYK 125
Query: 144 ----------LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQP 252
RL +MAPE V + ++D W F + E+ + G P
Sbjct: 186 ARDIXKDPDXVRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASP 241
Query: 253 RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
G +DE + ++ P P + +L C+ + RP ++++
Sbjct: 242 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 293
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 117/279 (41%), Gaps = 31/279 (11%)
Query: 35 NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VL 91
+ W P LKL R+G G FGEVW+ + + + +VAVK L K+ M
Sbjct: 14 DEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSL---KQGSMSPDAF 63
Query: 92 LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVF 150
L N +K + + L + V I II ++ E GS+ D + G KL+++ +
Sbjct: 64 LAEAN--LMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL 120
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
A +A+G+ + + + +L+ N ++++ + D + + +
Sbjct: 121 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAK- 179
Query: 211 LGTPNYMAPEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVV 266
P +W PE G + ++D W F + E++T G P G + E+ +
Sbjct: 180 -------FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 232
Query: 267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
R + P P + ++ C++ RP D LR
Sbjct: 233 RGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLR 269
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 104/251 (41%), Gaps = 31/251 (12%)
Query: 44 KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLF---- 99
+L IG+G F +V LA H L+ + EVAVKI+ D+ ++ L LF
Sbjct: 10 RLLKTIGKGNFAKVKLARHILTGK------EVAVKII-----DKTQLNSSSLQKLFREVR 58
Query: 100 -LKCQGVEGICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNV-FRYAIDL 156
+K I L + + ++M++ G V D + K + FR +
Sbjct: 59 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSA 118
Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNY 216
Q H K I+ +LK N +L+ + D + L G+P Y
Sbjct: 119 VQ---YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF----GNKLDTFCGSPPY 171
Query: 217 MAPEQWQ-PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 275
APE +Q + GP E D W + +++G P G+++ E+ + V+R + IP
Sbjct: 172 AAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY--RIP 226
Query: 276 SGLPPAVENVL 286
+ EN+L
Sbjct: 227 FYMSTDCENLL 237
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 114/292 (39%), Gaps = 27/292 (9%)
Query: 33 DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKEDRMRV 90
D + W P LKL +GRG FG+V A + + VAVK+L R
Sbjct: 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 91 LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK------- 143
L+ L L + + L + G + +I++F + G+ L+ +
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYK 134
Query: 144 ----------LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 194
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQP 252
RL +MAPE V + ++D W F + E+ + G P
Sbjct: 195 ARDIYKDPDXVRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASP 250
Query: 253 RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
G +DE + ++ P P + +L C+ + RP ++++
Sbjct: 251 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 113/292 (38%), Gaps = 27/292 (9%)
Query: 33 DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKEDRMRV 90
D + W P LKL +GRG FG+V A + + VAVK+L R
Sbjct: 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 91 LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK------- 143
L+ L L + + L + G + +I++F + G+ L+ +
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYK 134
Query: 144 ----------LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 194
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQP 252
RL +MAPE V + ++D W F + E+ + G P
Sbjct: 195 ARDIYKDPDYVRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASP 250
Query: 253 RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
G +DE + ++ P P + +L C+ + RP ++++
Sbjct: 251 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 116/279 (41%), Gaps = 31/279 (11%)
Query: 35 NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VL 91
+ W P LKL R+G G FGEVW+ + + + +VAVK L K+ M
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSL---KQGSMSPDAF 61
Query: 92 LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVF 150
L N +K + + L + V I II ++ E GS+ D + G KL+++ +
Sbjct: 62 LAEAN--LMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL 118
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
A +A+G+ + + + +L+ N ++++ + D ++ R
Sbjct: 119 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF-----GLARLIEDNEXTAR 173
Query: 211 LGTP---NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVV 266
G + APE G + ++D W F + E++T G P G + E+ +
Sbjct: 174 EGAKFPIKWTAPEAIN---YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 230
Query: 267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
R + P P + ++ C++ RP D LR
Sbjct: 231 RGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLR 267
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 112/292 (38%), Gaps = 27/292 (9%)
Query: 33 DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKEDRMRV 90
D + W P LKL +GRG FG+V A + + VAVK+L R
Sbjct: 9 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 91 LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK------- 143
L+ L L + + L + G + +I +F + G+ L+ +
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCK--FGNLSTYLRSKRNEFVPYK 125
Query: 144 ----------LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQP 252
RL +MAPE V + ++D W F + E+ + G P
Sbjct: 186 ARDIYKDPDYVRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASP 241
Query: 253 RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
G +DE + ++ P P + +L C+ + RP ++++
Sbjct: 242 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 293
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 117/279 (41%), Gaps = 31/279 (11%)
Query: 35 NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VL 91
+ W P LKL R+G G FGEVW+ + + + +VAVK L K+ M
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSL---KQGSMSPDAF 55
Query: 92 LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVF 150
L N +K + + L + V I II ++ E GS+ D + G KL+++ +
Sbjct: 56 LAEAN--LMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL 112
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
A +A+G+ + + + +L+ N ++++ + D ++ R
Sbjct: 113 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF-----GLARLIEDNEXTAR 167
Query: 211 LGTPNYMAPEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVV 266
G P +W PE G + ++D W F + E++T G P G + E+ +
Sbjct: 168 EGAK---FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 224
Query: 267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
R + P P + ++ C++ RP D LR
Sbjct: 225 RGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLR 261
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 117/279 (41%), Gaps = 31/279 (11%)
Query: 35 NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VL 91
+ W P LKL R+G G FGEVW+ + + + +VAVK L K+ M
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSL---KQGSMSPDAF 55
Query: 92 LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVF 150
L N +K + + L + V I II ++ E GS+ D + G KL+++ +
Sbjct: 56 LAEAN--LMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL 112
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
A +A+G+ + + + +L+ N ++++ + D ++ R
Sbjct: 113 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF-----GLARLIEDNEXTAR 167
Query: 211 LGTPNYMAPEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVV 266
G P +W PE G + ++D W F + E++T G P G + E+ +
Sbjct: 168 EGAK---FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 224
Query: 267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
R + P P + ++ C++ RP D LR
Sbjct: 225 RGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLR 261
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 117/279 (41%), Gaps = 31/279 (11%)
Query: 35 NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VL 91
+ W P LKL R+G G FGEVW+ + + + +VAVK L K+ M
Sbjct: 8 DEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSL---KQGSMSPDAF 57
Query: 92 LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVF 150
L N +K + + L + V I II ++ E GS+ D + G KL+++ +
Sbjct: 58 LAEAN--LMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL 114
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
A +A+G+ + + + +L+ N ++++ + D ++ R
Sbjct: 115 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF-----GLARLIEDNEXTAR 169
Query: 211 LGTPNYMAPEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVV 266
G P +W PE G + ++D W F + E++T G P G + E+ +
Sbjct: 170 EGAK---FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 226
Query: 267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
R + P P + ++ C++ RP D LR
Sbjct: 227 RGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLR 263
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 117/279 (41%), Gaps = 31/279 (11%)
Query: 35 NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VL 91
+ W P LKL R+G G FGEVW+ + + + +VAVK L K+ M
Sbjct: 7 DEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSL---KQGSMSPDAF 56
Query: 92 LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVF 150
L N +K + + L + V I II ++ E GS+ D + G KL+++ +
Sbjct: 57 LAEAN--LMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL 113
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
A +A+G+ + + + +L+ N ++++ + D ++ R
Sbjct: 114 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF-----GLARLIEDNEXTAR 168
Query: 211 LGTPNYMAPEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVV 266
G P +W PE G + ++D W F + E++T G P G + E+ +
Sbjct: 169 EGAK---FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 225
Query: 267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
R + P P + ++ C++ RP D LR
Sbjct: 226 RGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLR 262
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 103/251 (41%), Gaps = 31/251 (12%)
Query: 44 KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLF---- 99
+L IG+G F +V LA H L+ EVA+KI+ D+ ++ L LF
Sbjct: 18 RLLKTIGKGNFAKVKLARHILTG------REVAIKII-----DKTQLNPTSLQKLFREVR 66
Query: 100 -LKCQGVEGICWLQGISVINGKICIIMKFYEG-SVGDRM-AQLKGGKLSLSNVFRYAIDL 156
+K I L + + +IM++ G V D + A + + + FR +
Sbjct: 67 IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSA 126
Query: 157 AQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNY 216
Q H K I+ +LK N +L+ + D L G P Y
Sbjct: 127 VQ---YCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV----GGKLDAFCGAPPY 179
Query: 217 MAPEQWQ-PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 275
APE +Q + GP E D W + +++G P G+++ E+ + V+R + IP
Sbjct: 180 AAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY--RIP 234
Query: 276 SGLPPAVENVL 286
+ EN+L
Sbjct: 235 FYMSTDCENLL 245
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 103/259 (39%), Gaps = 22/259 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
+G+G FG V+LA S +A+K+L + ++ V + ++ ++
Sbjct: 21 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 108 ICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G ++ +I+++ G V + +L K Y +LA + HSK
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKELQKL--SKFDEQRTATYITELANALSYCHSK 132
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ ++KP N +L A G++ SS GT +Y+ PE +
Sbjct: 133 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM----I 183
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
G + E D W E L G P + E Y + R + P + ++
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 241
Query: 286 LLGCFEYDLRSRPLMTDIL 304
+ +++ RP++ ++L
Sbjct: 242 ISRLLKHNPSQRPMLREVL 260
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 116/279 (41%), Gaps = 31/279 (11%)
Query: 35 NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VL 91
+ W P LKL R+G G FGEVW+ + + + +VAVK L K+ M
Sbjct: 15 DEWEVPRETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSL---KQGSMSPDAF 64
Query: 92 LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVF 150
L N +K + + L + V I II ++ E GS+ D + G KL+++ +
Sbjct: 65 LAEAN--LMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL 121
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
A +A+G+ + + + +L+ N ++++ + D ++ R
Sbjct: 122 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF-----GLARLIEDNEXTAR 176
Query: 211 LGTP---NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVV 266
G + APE G + ++D W F + E++T G P G + E+ +
Sbjct: 177 EGAKFPIKWTAPEAIN---YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 233
Query: 267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
R + P P + ++ C++ RP D LR
Sbjct: 234 RGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLR 270
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 103/259 (39%), Gaps = 22/259 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
+G+G FG V+LA S +A+K+L + ++ V + ++ ++
Sbjct: 21 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 108 ICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G ++ +I+++ G V + +L K Y +LA + HSK
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKELQKL--SKFDEQRTATYITELANALSYCHSK 132
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ ++KP N +L A G++ SS GT +Y+ PE +
Sbjct: 133 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRXXLXGTLDYLPPEM----I 183
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
G + E D W E L G P + E Y + R + P + ++
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 241
Query: 286 LLGCFEYDLRSRPLMTDIL 304
+ +++ RP++ ++L
Sbjct: 242 ISRLLKHNPSQRPMLREVL 260
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/258 (19%), Positives = 104/258 (40%), Gaps = 16/258 (6%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
+IG+G FGEV+ D VA+KI+ + + +++ + +C
Sbjct: 29 KIGKGSFGEVFKGI------DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-PY 81
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG 167
+ G + + K+ IIM++ G G + L+ G L + + ++ +G+ LHS+
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGG--GSALDLLEPGPLDETQIATILREILKGLDYLHSEK 139
Query: 168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVR 227
+ ++K N +L+E L D + +GTP +MAPE + +
Sbjct: 140 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXF---VGTPFWMAPEVIK---Q 193
Query: 228 GPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLL 287
+ D W + IE+ G P ++ ++ + P + ++ +
Sbjct: 194 SAYDSKADIWSLGITAIELARGEPPHSELHPMKVL-FLIPKNNPPTLEGNYSKPLKEFVE 252
Query: 288 GCFEYDLRSRPLMTDILR 305
C + RP ++L+
Sbjct: 253 ACLNKEPSFRPTAKELLK 270
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 22/259 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
+G+G FG V+LA S +A+K+L + ++ V + ++ ++
Sbjct: 16 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G ++ +I+++ G+V + +L K Y +LA + HSK
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 127
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ ++KP N +L A G++ SS GT +Y+ PE +
Sbjct: 128 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTELCGTLDYLPPEM----I 178
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
G + E D W E L G P + E Y + R + P + ++
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 236
Query: 286 LLGCFEYDLRSRPLMTDIL 304
+ +++ RP++ ++L
Sbjct: 237 ISRLLKHNPSQRPMLREVL 255
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/258 (19%), Positives = 104/258 (40%), Gaps = 16/258 (6%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
+IG+G FGEV+ D VA+KI+ + + +++ + +C
Sbjct: 14 KIGKGSFGEVFKGI------DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-PY 66
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG 167
+ G + + K+ IIM++ G G + L+ G L + + ++ +G+ LHS+
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGG--GSALDLLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVR 227
+ ++K N +L+E L D + +GTP +MAPE + +
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF---VGTPFWMAPEVIK---Q 178
Query: 228 GPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLL 287
+ D W + IE+ G P ++ ++ + P + ++ +
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPPHSELHPMKVL-FLIPKNNPPTLEGNYSKPLKEFVE 237
Query: 288 GCFEYDLRSRPLMTDILR 305
C + RP ++L+
Sbjct: 238 ACLNKEPSFRPTAKELLK 255
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 76/201 (37%), Gaps = 19/201 (9%)
Query: 114 ISVINGKICIIMKFYEGSVGDRMAQLKGGK-----LSLSNVFRYAIDLAQGILQLHSKG- 167
I N + I+M++ EG GD + + G L V R L + + H +
Sbjct: 75 IDRTNTTLYIVMEYCEG--GDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 168 ----ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQ 223
+L +LKP N L+ LGD + + +GTP YM+PEQ
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEF---VGTPYYMSPEQMN 189
Query: 224 PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE 283
R + ++D W C + E+ + P S E+ +R + IP +
Sbjct: 190 ---RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL-AGKIREGKFRRIPYRYSDELN 245
Query: 284 NVLLGCFEYDLRSRPLMTDIL 304
++ RP + +IL
Sbjct: 246 EIITRMLNLKDYHRPSVEEIL 266
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/258 (19%), Positives = 104/258 (40%), Gaps = 16/258 (6%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
+IG+G FGEV+ D VA+KI+ + + +++ + +C
Sbjct: 14 KIGKGSFGEVFKGI------DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-PY 66
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG 167
+ G + + K+ IIM++ G G + L+ G L + + ++ +G+ LHS+
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGG--GSALDLLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVR 227
+ ++K N +L+E L D + +GTP +MAPE + +
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXF---VGTPFWMAPEVIK---Q 178
Query: 228 GPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLL 287
+ D W + IE+ G P ++ ++ + P + ++ +
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPPHSELHPMKVL-FLIPKNNPPTLEGNYSKPLKEFVE 237
Query: 288 GCFEYDLRSRPLMTDILR 305
C + RP ++L+
Sbjct: 238 ACLNKEPSFRPTAKELLK 255
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 22/259 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
+G+G FG V+LA S +A+K+L + ++ V + ++ ++
Sbjct: 18 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G ++ +I+++ G+V + +L K Y +LA + HSK
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 129
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ ++KP N +L A G++ SS GT +Y+ PE +
Sbjct: 130 RVIHRDIKPENLLLGSA-----GELKIANFGWSVHAPSSRRTTLCGTLDYLPPEM----I 180
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
G + E D W E L G P + E Y + R + P + ++
Sbjct: 181 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 238
Query: 286 LLGCFEYDLRSRPLMTDIL 304
+ +++ RP++ ++L
Sbjct: 239 ISRLLKHNPSQRPMLREVL 257
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 22/259 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
+G+G FG V+LA S +A+K+L + ++ V + ++ ++
Sbjct: 16 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G ++ +I+++ G+V + +L K Y +LA + HSK
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 127
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ ++KP N +L A G++ SS GT +Y+ PE +
Sbjct: 128 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM----I 178
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
G + E D W E L G P + E Y + R + P + ++
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 236
Query: 286 LLGCFEYDLRSRPLMTDIL 304
+ +++ RP++ ++L
Sbjct: 237 ISRLLKHNPSQRPMLREVL 255
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/258 (19%), Positives = 105/258 (40%), Gaps = 20/258 (7%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
+G+G FG V+LA + + +A+K+L + ++ V + ++ ++
Sbjct: 16 LGKGKFGNVYLA------REKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G + ++ +I+++ G+V + +L K Y +LA + HSK
Sbjct: 70 ILRLYGYFHDSTRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 127
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ ++KP N +L A G++ SS GT +Y+ PE + +
Sbjct: 128 KVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRM 182
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W E L G P + + Y + R + P + +++
Sbjct: 183 HDE---KVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFT--FPDFVTEGARDLI 237
Query: 287 LGCFEYDLRSRPLMTDIL 304
+++ RP++ ++L
Sbjct: 238 SRLLKHNPSQRPMLREVL 255
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 90/229 (39%), Gaps = 24/229 (10%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPV----KEDRMRVLLERLNDLFLKCQG 104
IGRG FGEV L H S + A+K+L + D ER D+
Sbjct: 83 IGRGAFGEVQLVRHKASQK------VYAMKLLSKFEMIKRSDSAFFWEER--DIMAFANS 134
Query: 105 ---VEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGIL 161
V+ C Q + + ++M++ G GD + + + Y ++ +
Sbjct: 135 PWVVQLFCAFQD----DKYLYMVMEYMPG--GDLVNLMSNYDVPEKWAKFYTAEVVLALD 188
Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
+HS G++ ++KP N +L++ L D D +GTP+Y++PE
Sbjct: 189 AIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTA--VGTPDYISPEV 246
Query: 222 WQPE-VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ 269
+ + G E D W + EML G P S+ Y ++ +
Sbjct: 247 LKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHK 295
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 22/259 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
+G+G FG V+LA S +A+K+L + ++ V + ++ ++
Sbjct: 33 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 86
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G ++ +I+++ G+V + +L K Y +LA + HSK
Sbjct: 87 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 144
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ ++KP N +L A G++ SS GT +Y+ PE +
Sbjct: 145 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM----I 195
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
G + E D W E L G P + E Y + R + P + ++
Sbjct: 196 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 253
Query: 286 LLGCFEYDLRSRPLMTDIL 304
+ +++ RP++ ++L
Sbjct: 254 ISRLLKHNPSQRPMLREVL 272
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 22/259 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
+G+G FG V+LA S +A+K+L + ++ V + ++ ++
Sbjct: 21 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G ++ +I+++ G+V + +L K Y +LA + HSK
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 132
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ ++KP N +L A G++ SS GT +Y+ PE +
Sbjct: 133 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM----I 183
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
G + E D W E L G P + E Y + R + P + ++
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 241
Query: 286 LLGCFEYDLRSRPLMTDIL 304
+ +++ RP++ ++L
Sbjct: 242 ISRLLKHNPSQRPMLREVL 260
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 89/223 (39%), Gaps = 41/223 (18%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMRVLLERLN--- 96
+G G F V LA ++ E A+KIL H +KE+ R R ++ RL+
Sbjct: 40 LGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 97 --DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
L+ Q E + + G+S NG++ ++ K G + Y
Sbjct: 94 FVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGSFDETCTRFYT 138
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
++ + LH KGI+ +LKP N +LNE + D + +GT
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGT 197
Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP-RCG 255
Y++PE + S D W C I +++ G+ P R G
Sbjct: 198 AQYVSPELLTEKSAXKSS---DLWALGCIIYQLVAGLPPFRAG 237
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 111/285 (38%), Gaps = 57/285 (20%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMRVLLERLN--- 96
+G G F V LA ++ E A+KIL H +KE+ R R ++ RL+
Sbjct: 43 LGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 97 --DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
L+ Q E + + G+S NG++ ++ K G + Y
Sbjct: 97 FVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGSFDETCTRFYT 141
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
++ + LH KGI+ +LKP N +LNE + D + +GT
Sbjct: 142 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGT 200
Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP 273
Y++PE + S D W C I +++ G+ P + I+ +++ +
Sbjct: 201 AQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY--D 255
Query: 274 IPSGLPPA----VENVL-------LGCFEYD----LRSRPLMTDI 303
P+ P VE +L LGC E + L++ P +
Sbjct: 256 FPAAFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 300
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 103/258 (39%), Gaps = 20/258 (7%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
+G+G FG V+LA S +A+K+L + ++ V + ++ ++
Sbjct: 16 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G ++ +I+++ G+V + +L K Y +LA + HSK
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 127
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ ++KP N +L A G++ SS GT +Y+ PE + +
Sbjct: 128 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRM 182
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W E L G P + E Y + R + P + +++
Sbjct: 183 HDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLI 237
Query: 287 LGCFEYDLRSRPLMTDIL 304
+++ RP++ ++L
Sbjct: 238 SRLLKHNPSQRPMLREVL 255
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 103/258 (39%), Gaps = 20/258 (7%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
+G+G FG V+LA S +A+K+L + ++ V + ++ ++
Sbjct: 20 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G ++ +I+++ G+V + +L K Y +LA + HSK
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 131
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ ++KP N +L A G++ SS GT +Y+ PE + +
Sbjct: 132 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM 186
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W E L G P + E Y + R + P + +++
Sbjct: 187 HDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLI 241
Query: 287 LGCFEYDLRSRPLMTDIL 304
+++ RP++ ++L
Sbjct: 242 SRLLKHNPSQRPMLREVL 259
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 92/233 (39%), Gaps = 38/233 (16%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMRVLLERLN--- 96
+G G F V LA ++ E A+KIL H +KE+ R R ++ RL+
Sbjct: 40 LGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 97 --DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAI 154
L+ Q E + + G+S K ++K+ K G + Y
Sbjct: 94 FVKLYFTFQDDEKLYF--GLSY--AKNGCLLKYIR----------KIGSFDETCTRFYTA 139
Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTP 214
++ + LH KGI+ +LKP N +LNE + D + +GT
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANSFVGTA 198
Query: 215 NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR 267
Y++PE S +D W C I +++ G+ P + I+ +++
Sbjct: 199 QYVSPELL---TEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 248
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 22/259 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
+G+G FG V+LA S +A+K+L + ++ V + ++ ++
Sbjct: 21 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G ++ +I+++ G+V + +L K Y +LA + HSK
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 132
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ ++KP N +L A G++ SS GT +Y+ PE +
Sbjct: 133 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM----I 183
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
G + E D W E L G P + E Y + R + P + ++
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 241
Query: 286 LLGCFEYDLRSRPLMTDIL 304
+ +++ RP++ ++L
Sbjct: 242 ISRLLKHNPSQRPMLREVL 260
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 22/259 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
+G+G FG V+LA S +A+K+L + ++ V + ++ ++
Sbjct: 19 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G ++ +I+++ G+V + +L K Y +LA + HSK
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 130
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ ++KP N +L A G++ SS GT +Y+ PE +
Sbjct: 131 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM----I 181
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
G + E D W E L G P + E Y + R + P + ++
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 239
Query: 286 LLGCFEYDLRSRPLMTDIL 304
+ +++ RP++ ++L
Sbjct: 240 ISRLLKHNPSQRPMLREVL 258
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 22/259 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
+G+G FG V+LA S +A+K+L + ++ V + ++ ++
Sbjct: 42 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G ++ +I+++ G+V + +L K Y +LA + HSK
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 153
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ ++KP N +L A G++ SS GT +Y+ PE +
Sbjct: 154 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM----I 204
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
G + E D W E L G P + E Y + R + P + ++
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 262
Query: 286 LLGCFEYDLRSRPLMTDIL 304
+ +++ RP++ ++L
Sbjct: 263 ISRLLKHNPSQRPMLREVL 281
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 22/259 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
+G+G FG V+LA S +A+K+L + ++ V + ++ ++
Sbjct: 18 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G ++ +I+++ G+V + +L K Y +LA + HSK
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 129
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ ++KP N +L A G++ SS GT +Y+ PE +
Sbjct: 130 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRXXLCGTLDYLPPEM----I 180
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
G + E D W E L G P + E Y + R + P + ++
Sbjct: 181 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 238
Query: 286 LLGCFEYDLRSRPLMTDIL 304
+ +++ RP++ ++L
Sbjct: 239 ISRLLKHNPSQRPMLREVL 257
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 116/297 (39%), Gaps = 48/297 (16%)
Query: 24 LRTAVATSNDTNAWIKPSALKLRHRI-----------GRGPFGEV----------WLATH 62
R+ + N ++ S K +HR+ G+G FG+V + A
Sbjct: 120 FRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMK 179
Query: 63 YLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKIC 122
L E EVA H + E+R +L+ FL L+ + ++C
Sbjct: 180 ILKKEVIVAKDEVA----HTLTENR---VLQNSRHPFLTA--------LKYSFQTHDRLC 224
Query: 123 IIMKFYEGSVGDRMAQLKGGKLSLSNVFR-YAIDLAQGILQLHS-KGILVLNLKPFNFIL 180
+M++ G G+ L ++ + R Y ++ + LHS K ++ +LK N +L
Sbjct: 225 FVMEYANG--GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML 282
Query: 181 NEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFA 240
++ + D + + GTP Y+APE + G D WG
Sbjct: 283 DKDGHIKITDFGLCKEGIKD---GATMKTFCGTPEYLAPEVLEDNDYGRA---VDWWGLG 336
Query: 241 CSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 297
+ EM+ G P + +++++ ++ E P L P +++L G + D + R
Sbjct: 337 VVMYEMMCGRLPFYNQDHEKLFELIL--MEEIRFPRTLGPEAKSLLSGLLKKDPKQR 391
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 95/226 (42%), Gaps = 18/226 (7%)
Query: 27 AVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPV--K 84
A + + N +K L+ +GRG +G V H S + +AVK +
Sbjct: 37 ACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQI------MAVKRIRATVNS 90
Query: 85 EDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL--KGG 142
+++ R+L++ D+ ++ G G + I M+ + S+ Q+ KG
Sbjct: 91 QEQKRLLMDL--DISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQ 148
Query: 143 KLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 201
+ + + A+ + + + LHSK ++ ++KP N ++N + + D
Sbjct: 149 TIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSV 208
Query: 202 XXSSDLPRRLGTPNYMAPEQWQPEVRGP-ISFETDSWGFACSIIEM 246
+ D G YMAPE+ PE+ S ++D W ++IE+
Sbjct: 209 AKTIDA----GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 22/259 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
+G+G FG V+LA S +A+K+L + ++ V + ++ ++
Sbjct: 17 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G ++ +I+++ G+V + +L K Y +LA + HSK
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 128
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ ++KP N +L A G++ SS GT +Y+ PE +
Sbjct: 129 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRDTLCGTLDYLPPEM----I 179
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
G + E D W E L G P + E Y + R + P + ++
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 237
Query: 286 LLGCFEYDLRSRPLMTDIL 304
+ +++ RP++ ++L
Sbjct: 238 ISRLLKHNPSQRPMLREVL 256
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 22/259 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
+G+G FG V+LA S +A+K+L + ++ V + ++ ++
Sbjct: 19 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G ++ +I+++ G+V + +L K Y +LA + HSK
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 130
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ ++KP N +L A G++ SS GT +Y+ PE +
Sbjct: 131 RVIHRDIKPENLLLGSA-----GELKIANFGWSVHAPSSRRTTLCGTLDYLPPEM----I 181
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
G + E D W E L G P + E Y + R + P + ++
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 239
Query: 286 LLGCFEYDLRSRPLMTDIL 304
+ +++ RP++ ++L
Sbjct: 240 ISRLLKHNPSQRPMLREVL 258
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 103/258 (39%), Gaps = 20/258 (7%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
+G+G FG V+LA S +A+K+L + ++ V + ++ ++
Sbjct: 19 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G ++ +I+++ G+V + +L K Y +LA + HSK
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 130
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ ++KP N +L A G++ SS GT +Y+ PE + +
Sbjct: 131 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRM 185
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W E L G P + E Y + R + P + +++
Sbjct: 186 HDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLI 240
Query: 287 LGCFEYDLRSRPLMTDIL 304
+++ RP++ ++L
Sbjct: 241 SRLLKHNPSQRPMLREVL 258
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 75/201 (37%), Gaps = 19/201 (9%)
Query: 114 ISVINGKICIIMKFYEGSVGDRMAQLKGGK-----LSLSNVFRYAIDLAQGILQLHSKG- 167
I N + I+M++ EG GD + + G L V R L + + H +
Sbjct: 75 IDRTNTTLYIVMEYCEG--GDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 168 ----ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQ 223
+L +LKP N L+ LGD + +GTP YM+PEQ
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTF---VGTPYYMSPEQMN 189
Query: 224 PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE 283
R + ++D W C + E+ + P S E+ +R + IP +
Sbjct: 190 ---RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL-AGKIREGKFRRIPYRYSDELN 245
Query: 284 NVLLGCFEYDLRSRPLMTDIL 304
++ RP + +IL
Sbjct: 246 EIITRMLNLKDYHRPSVEEIL 266
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 22/259 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
+G+G FG V+LA S +A+K+L + ++ V + ++ ++
Sbjct: 17 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G ++ +I+++ G+V + +L K Y +LA + HSK
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 128
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ ++KP N +L A G++ SS GT +Y+ PE +
Sbjct: 129 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM----I 179
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
G + E D W E L G P + E Y + R + P + ++
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 237
Query: 286 LLGCFEYDLRSRPLMTDIL 304
+ +++ RP++ ++L
Sbjct: 238 ISRLLKHNPSQRPMLREVL 256
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 22/259 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
+G+G FG V+LA S +A+K+L + ++ V + ++ ++
Sbjct: 16 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G ++ +I+++ G+V + +L K Y +LA + HSK
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 127
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ ++KP N +L A G++ SS GT +Y+ PE +
Sbjct: 128 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM----I 178
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
G + E D W E L G P + E Y + R + P + ++
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 236
Query: 286 LLGCFEYDLRSRPLMTDIL 304
+ +++ RP++ ++L
Sbjct: 237 ISRLLKHNPSQRPMLREVL 255
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 116/297 (39%), Gaps = 48/297 (16%)
Query: 24 LRTAVATSNDTNAWIKPSALKLRHRI-----------GRGPFGEV----------WLATH 62
R+ + N ++ S K +HR+ G+G FG+V + A
Sbjct: 123 FRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMK 182
Query: 63 YLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKIC 122
L E EVA H + E+R +L+ FL L+ + ++C
Sbjct: 183 ILKKEVIVAKDEVA----HTLTENR---VLQNSRHPFLTA--------LKYSFQTHDRLC 227
Query: 123 IIMKFYEGSVGDRMAQLKGGKLSLSNVFR-YAIDLAQGILQLHS-KGILVLNLKPFNFIL 180
+M++ G G+ L ++ + R Y ++ + LHS K ++ +LK N +L
Sbjct: 228 FVMEYANG--GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML 285
Query: 181 NEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFA 240
++ + D + + GTP Y+APE + G D WG
Sbjct: 286 DKDGHIKITDFGLCKEGIKD---GATMKTFCGTPEYLAPEVLEDNDYGRA---VDWWGLG 339
Query: 241 CSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 297
+ EM+ G P + +++++ ++ E P L P +++L G + D + R
Sbjct: 340 VVMYEMMCGRLPFYNQDHEKLFELIL--MEEIRFPRTLGPEAKSLLSGLLKKDPKQR 394
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 103/258 (39%), Gaps = 20/258 (7%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
+G+G FG V+LA S +A+K+L + ++ V + ++ ++
Sbjct: 16 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G ++ +I+++ G+V + +L K Y +LA + HSK
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 127
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ ++KP N +L A G++ SS GT +Y+ PE + +
Sbjct: 128 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRM 182
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W E L G P + E Y + R + P + +++
Sbjct: 183 HDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLI 237
Query: 287 LGCFEYDLRSRPLMTDIL 304
+++ RP++ ++L
Sbjct: 238 SRLLKHNPSQRPMLREVL 255
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 103/258 (39%), Gaps = 20/258 (7%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
+G+G FG V+LA S +A+K+L + ++ V + ++ ++
Sbjct: 16 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G ++ +I+++ G+V + +L K Y +LA + HSK
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 127
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ ++KP N +L A G++ SS GT +Y+ PE + +
Sbjct: 128 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRM 182
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W E L G P + E Y + R + P + +++
Sbjct: 183 HDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLI 237
Query: 287 LGCFEYDLRSRPLMTDIL 304
+++ RP++ ++L
Sbjct: 238 SRLLKHNPSQRPMLREVL 255
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 103/258 (39%), Gaps = 20/258 (7%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
+G+G FG V+LA S +A+K+L + ++ V + ++ ++
Sbjct: 19 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G ++ +I+++ G+V + +L K Y +LA + HSK
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 130
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ ++KP N +L A G++ SS GT +Y+ PE + +
Sbjct: 131 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W E L G P + E Y + R + P + +++
Sbjct: 186 HDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLI 240
Query: 287 LGCFEYDLRSRPLMTDIL 304
+++ RP++ ++L
Sbjct: 241 SRLLKHNPSQRPMLREVL 258
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 101/275 (36%), Gaps = 27/275 (9%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
+PS L +G+G FG+ TH + E + +K L E+ R L+ +
Sbjct: 7 FRPSDLIHGEVLGKGCFGQAIKVTHRETGE------VMVMKELIRFDEETQRTFLKEVK- 59
Query: 98 LFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLA 157
++C + G+ + ++ I ++ +G + + + S +A D+A
Sbjct: 60 -VMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIA 118
Query: 158 QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDL-----PRR-- 210
G+ LHS I+ +L N ++ E V+ D L P R
Sbjct: 119 SGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKK 178
Query: 211 ----LGTPNYMAPEQWQPEVRGPISFETDSWGFA---CSIIEMLTGVQPRCGRSVDEIYD 263
+G P +MAPE + D + F C II + R++D +
Sbjct: 179 RYTVVGNPYWMAPEMINGR---SYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD--FG 233
Query: 264 AVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 298
VR P PP+ + + C + D RP
Sbjct: 234 LNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRP 268
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 114/291 (39%), Gaps = 26/291 (8%)
Query: 33 DTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKEDRMRV 90
D + W P L L +GRG FG+V A + + VAVK+L R
Sbjct: 19 DASKWEFPRDRLNLGKPLGRGAFGQVIEADAF-GIDKTATCRTVAVKMLKEGATHSEHRA 77
Query: 91 LLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK------- 143
L+ L L + + L + G + +I++F + G+ L+ +
Sbjct: 78 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYK 135
Query: 144 ---------LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXX 194
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 136 TPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 195
Query: 195 XXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPR 253
RL +MAPE V + ++D W F + E+ + G P
Sbjct: 196 RDIXKDPDXVRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPY 251
Query: 254 CGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
G +DE + ++ P P + +L C+ + RP ++++
Sbjct: 252 PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 103/258 (39%), Gaps = 20/258 (7%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
+G+G FG V+LA S +A+K+L + ++ V + ++ ++
Sbjct: 15 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 68
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G ++ +I+++ G+V + +L K Y +LA + HSK
Sbjct: 69 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 126
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ ++KP N +L A G++ SS GT +Y+ PE + +
Sbjct: 127 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM 181
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W E L G P + E Y + R + P + +++
Sbjct: 182 HDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLI 236
Query: 287 LGCFEYDLRSRPLMTDIL 304
+++ RP++ ++L
Sbjct: 237 SRLLKHNPSQRPMLREVL 254
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 93/234 (39%), Gaps = 40/234 (17%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMRVLLERLN--- 96
+G G F V LA ++ E A+KIL H +KE+ R R ++ RL+
Sbjct: 41 LGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 97 --DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
L+ Q E + + G+S NG++ ++ K G + Y
Sbjct: 95 FVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGSFDETCTRFYT 139
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
++ + LH KGI+ +LKP N +LNE + D + +GT
Sbjct: 140 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANSFVGT 198
Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR 267
Y++PE + S D W C I +++ G+ P + I+ +++
Sbjct: 199 AQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 249
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 111/284 (39%), Gaps = 55/284 (19%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMRVLLERLN--- 96
+G G F V LA ++ E A+KIL H +KE+ R R ++ RL+
Sbjct: 37 LGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 97 --DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
L+ Q E + + G+S NG++ ++ K G + Y
Sbjct: 91 FVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGSFDETCTRFYT 135
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
++ + LH KGI+ +LKP N +LNE + D + +GT
Sbjct: 136 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA-NSFVGT 194
Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP 273
Y++PE + S D W C I +++ G+ P + I+ +++ + P
Sbjct: 195 AQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 251
Query: 274 IPSGLPPA---VENVL-------LGCFEYD----LRSRPLMTDI 303
P A VE +L LGC E + L++ P +
Sbjct: 252 -EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 294
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 22/259 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
+G+G FG V+LA S +A+K+L + ++ V + ++ ++
Sbjct: 17 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G ++ +I+++ G+V + +L K Y +LA + HSK
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 128
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ ++KP N +L A G++ SS GT +Y+ PE +
Sbjct: 129 RVIHRDIKPENLLLGSA-----GELKIADFGWSCHAPSSRRTTLSGTLDYLPPEM----I 179
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
G + E D W E L G P + E Y + R + P + ++
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 237
Query: 286 LLGCFEYDLRSRPLMTDIL 304
+ +++ RP++ ++L
Sbjct: 238 ISRLLKHNPSQRPMLREVL 256
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 103/258 (39%), Gaps = 20/258 (7%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
+G+G FG V+LA S +A+K+L + ++ V + ++ ++
Sbjct: 19 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G ++ +I+++ G+V + +L K Y +LA + HSK
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 130
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ ++KP N +L A G++ SS GT +Y+ PE + +
Sbjct: 131 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRM 185
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W E L G P + E Y + R + P + +++
Sbjct: 186 HDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLI 240
Query: 287 LGCFEYDLRSRPLMTDIL 304
+++ RP++ ++L
Sbjct: 241 SRLLKHNPSQRPMLREVL 258
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 87/219 (39%), Gaps = 40/219 (18%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMRVLLERLN--- 96
+G G F V LA ++ E A+KIL H +KE+ R R ++ RL+
Sbjct: 40 LGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 97 --DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
L+ Q E + + G+S NG++ ++ K G + Y
Sbjct: 94 FVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGSFDETCTRFYT 138
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
++ + LH KGI+ +LKP N +LNE + D + +GT
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGT 197
Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
Y++PE + S D W C I +++ G+ P
Sbjct: 198 AQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 233
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 22/259 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
+G+G FG V+LA S +A+K+L + ++ V + ++ ++
Sbjct: 42 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G ++ +I+++ G+V + +L K Y +LA + HSK
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 153
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ ++KP N +L A G++ SS GT +Y+ PE +
Sbjct: 154 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRDDLCGTLDYLPPEM----I 204
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
G + E D W E L G P + E Y + R + P + ++
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 262
Query: 286 LLGCFEYDLRSRPLMTDIL 304
+ +++ RP++ ++L
Sbjct: 263 ISRLLKHNPSQRPMLREVL 281
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 93/234 (39%), Gaps = 40/234 (17%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMRVLLERLN--- 96
+G G F V LA ++ E A+KIL H +KE+ R R ++ RL+
Sbjct: 40 LGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 97 --DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
L+ Q E + + G+S NG++ ++ K G + Y
Sbjct: 94 FVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGSFDETCTRFYT 138
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
++ + LH KGI+ +LKP N +LNE + D + +GT
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGT 197
Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR 267
Y++PE + S D W C I +++ G+ P + I+ +++
Sbjct: 198 AQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 248
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 93/234 (39%), Gaps = 40/234 (17%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMRVLLERLN--- 96
+G G F V LA ++ E A+KIL H +KE+ R R ++ RL+
Sbjct: 40 LGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 97 --DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
L+ Q E + + G+S NG++ ++ K G + Y
Sbjct: 94 FVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGSFDETCTRFYT 138
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
++ + LH KGI+ +LKP N +LNE + D + +GT
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGT 197
Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR 267
Y++PE + S D W C I +++ G+ P + I+ +++
Sbjct: 198 AQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 248
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 102/253 (40%), Gaps = 32/253 (12%)
Query: 29 ATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRM 88
ATS D I +L IG+G F +V LA H L+ + EVAVKI+ D+
Sbjct: 4 ATSADEQPHI--GNYRLLKTIGKGNFAKVKLARHILTGK------EVAVKII-----DKT 50
Query: 89 RVLLERLNDLF-----LKCQGVEGICWLQGISVINGKICIIMKFYEG-SVGDRM-AQLKG 141
++ L LF K I L + + ++ ++ G V D + A +
Sbjct: 51 QLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRX 110
Query: 142 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 201
+ FR + Q H K I+ +LK N +L+ + D
Sbjct: 111 KEKEARAKFRQIVSAVQ---YCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTF-- 165
Query: 202 XXSSDLPRRLGTPNYMAPEQWQ-PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE 260
+ L G P Y APE +Q + GP E D W + +++G P G+++ E
Sbjct: 166 --GNKLDAFCGAPPYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDGQNLKE 220
Query: 261 IYDAVVR-RQEIP 272
+ + V+R + IP
Sbjct: 221 LRERVLRGKYRIP 233
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 93/234 (39%), Gaps = 40/234 (17%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMRVLLERLN--- 96
+G G F V LA ++ E A+KIL H +KE+ R R ++ RL+
Sbjct: 38 LGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 97 --DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
L+ Q E + + G+S NG++ ++ K G + Y
Sbjct: 92 FVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGSFDETCTRFYT 136
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
++ + LH KGI+ +LKP N +LNE + D + +GT
Sbjct: 137 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGT 195
Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR 267
Y++PE + S D W C I +++ G+ P + I+ +++
Sbjct: 196 AQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 246
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 22/259 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
+G+G FG V+LA S +A+K+L + ++ V + ++ ++
Sbjct: 16 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G ++ +I+++ G+V + +L K Y +LA + HSK
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 127
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ ++KP N +L A G++ SS GT +Y+ PE +
Sbjct: 128 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM----I 178
Query: 227 RGPISFE-TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
G + E D W E L G P + E Y + R + P + ++
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDL 236
Query: 286 LLGCFEYDLRSRPLMTDIL 304
+ +++ RP++ ++L
Sbjct: 237 ISRLLKHNPSQRPMLREVL 255
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 93/234 (39%), Gaps = 40/234 (17%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMRVLLERLN--- 96
+G G F V LA ++ E A+KIL H +KE+ R R ++ RL+
Sbjct: 41 LGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 97 --DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
L+ Q E + + G+S NG++ ++ K G + Y
Sbjct: 95 FVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGSFDETCTRFYT 139
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
++ + LH KGI+ +LKP N +LNE + D + +GT
Sbjct: 140 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGT 198
Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR 267
Y++PE + S D W C I +++ G+ P + I+ +++
Sbjct: 199 AQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 249
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 116/279 (41%), Gaps = 31/279 (11%)
Query: 35 NAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMR--VL 91
+AW P LKL R+G G GEVW+ + + + +VAVK L K+ M
Sbjct: 6 DAWEVPRETLKLVERLGAGQAGEVWMGYY-------NGHTKVAVKSL---KQGSMSPDAF 55
Query: 92 LERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVF 150
L N +K + + L + V I II ++ E GS+ D + G KL+++ +
Sbjct: 56 LAEAN--LMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL 112
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
A +A+G+ + + + +L+ N ++++ + D ++ R
Sbjct: 113 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF-----GLARLIEDAEXTAR 167
Query: 211 LGTP---NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVV 266
G + APE G + ++D W F + E++T G P G + E+ +
Sbjct: 168 EGAKFPIKWTAPEAIN---YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 224
Query: 267 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
R + P P + ++ C++ RP D LR
Sbjct: 225 RGYRMVR-PDNCPEELYQLMRLCWKERPEDRPTF-DYLR 261
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 104/259 (40%), Gaps = 16/259 (6%)
Query: 47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE 106
+IG+G FGEV+ D VA+KI+ + + +++ + +C
Sbjct: 33 EKIGKGSFGEVFKGI------DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-P 85
Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
+ G + + K+ IIM++ G G + L+ G L + + ++ +G+ LHS+
Sbjct: 86 YVTKYYGSYLKDTKLWIIMEYLGG--GSALDLLEPGPLDETQIATILREILKGLDYLHSE 143
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
+ ++K N +L+E L D + +GTP +MAPE +
Sbjct: 144 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF---VGTPFWMAPEVIK--- 197
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ + D W + IE+ G P ++ ++ + P + ++ +
Sbjct: 198 QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL-FLIPKNNPPTLEGNYSKPLKEFV 256
Query: 287 LGCFEYDLRSRPLMTDILR 305
C + RP ++L+
Sbjct: 257 EACLNKEPSFRPTAKELLK 275
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 93/234 (39%), Gaps = 40/234 (17%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMRVLLERLN--- 96
+G G F V LA ++ E A+KIL H +KE+ R R ++ RL+
Sbjct: 40 LGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 97 --DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
L+ Q E + + G+S NG++ ++ K G + Y
Sbjct: 94 FVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGSFDETCTRFYT 138
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
++ + LH KGI+ +LKP N +LNE + D + +GT
Sbjct: 139 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGT 197
Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR 267
Y++PE + S D W C I +++ G+ P + I+ +++
Sbjct: 198 AQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 248
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 103/258 (39%), Gaps = 20/258 (7%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
+G+G FG V+LA S +A+K+L + ++ V + ++ ++
Sbjct: 19 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G ++ +I+++ G+V + +L K Y +LA + HSK
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 130
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ ++KP N +L A G++ SS GT +Y+ PE + +
Sbjct: 131 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRM 185
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W E L G P + E Y + R + P + +++
Sbjct: 186 HDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLI 240
Query: 287 LGCFEYDLRSRPLMTDIL 304
+++ RP++ ++L
Sbjct: 241 SRLLKHNPSQRPMLREVL 258
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 111/284 (39%), Gaps = 55/284 (19%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMRVLLERLN--- 96
+G G F V LA ++ E A+KIL H +KE+ R R ++ RL+
Sbjct: 37 LGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 97 --DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
L+ Q E + + G+S NG++ ++ K G + Y
Sbjct: 91 FVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGSFDETCTRFYT 135
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
++ + LH KGI+ +LKP N +LNE + D + +GT
Sbjct: 136 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA-NXFVGT 194
Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP 273
Y++PE + S D W C I +++ G+ P + I+ +++ + P
Sbjct: 195 AQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 251
Query: 274 IPSGLPPA---VENVL-------LGCFEYD----LRSRPLMTDI 303
P A VE +L LGC E + L++ P +
Sbjct: 252 -EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 294
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 75/201 (37%), Gaps = 19/201 (9%)
Query: 114 ISVINGKICIIMKFYEGSVGDRMAQLKGGK-----LSLSNVFRYAIDLAQGILQLHSKG- 167
I N + I+M++ EG GD + + G L V R L + + H +
Sbjct: 75 IDRTNTTLYIVMEYCEG--GDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 168 ----ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQ 223
+L +LKP N L+ LGD + +GTP YM+PEQ
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAF---VGTPYYMSPEQMN 189
Query: 224 PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE 283
R + ++D W C + E+ + P S E+ +R + IP +
Sbjct: 190 ---RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL-AGKIREGKFRRIPYRYSDELN 245
Query: 284 NVLLGCFEYDLRSRPLMTDIL 304
++ RP + +IL
Sbjct: 246 EIITRMLNLKDYHRPSVEEIL 266
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 87/219 (39%), Gaps = 40/219 (18%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMRVLLERLN--- 96
+G G F V LA ++ E A+KIL H +KE+ R R ++ RL+
Sbjct: 38 LGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 97 --DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
L+ Q E + + G+S NG++ ++ K G + Y
Sbjct: 92 FVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGSFDETCTRFYT 136
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
++ + LH KGI+ +LKP N +LNE + D + +GT
Sbjct: 137 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGT 195
Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
Y++PE + S D W C I +++ G+ P
Sbjct: 196 AQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 231
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/258 (19%), Positives = 103/258 (39%), Gaps = 20/258 (7%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
+G+G FG V+LA + +A+K+L + ++ V + ++ ++
Sbjct: 13 LGKGKFGNVYLA------REKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 66
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G ++ +I+++ G+V + +L K Y +LA + HSK
Sbjct: 67 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 124
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ ++KP N +L A G++ SS GT +Y+ PE + +
Sbjct: 125 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM 179
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W E L G P + E Y + R + P + +++
Sbjct: 180 HDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLI 234
Query: 287 LGCFEYDLRSRPLMTDIL 304
+++ RP++ ++L
Sbjct: 235 SRLLKHNPSQRPMLREVL 252
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 87/219 (39%), Gaps = 40/219 (18%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMRVLLERLN--- 96
+G G F V LA ++ E A+KIL H +KE+ R R ++ RL+
Sbjct: 38 LGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 97 --DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
L+ Q E + + G+S NG++ ++ K G + Y
Sbjct: 92 FVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGSFDETCTRFYT 136
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
++ + LH KGI+ +LKP N +LNE + D + +GT
Sbjct: 137 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANAFVGT 195
Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
Y++PE + S D W C I +++ G+ P
Sbjct: 196 AQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 231
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 111/284 (39%), Gaps = 55/284 (19%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMRVLLERLN--- 96
+G G F V LA ++ E A+KIL H +KE+ R R ++ RL+
Sbjct: 22 LGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 97 --DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
L+ Q E + + G+S NG++ ++ K G + Y
Sbjct: 76 FVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGSFDETCTRFYT 120
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
++ + LH KGI+ +LKP N +LNE + D + +GT
Sbjct: 121 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGT 179
Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP 273
Y++PE + S D W C I +++ G+ P + I+ +++ + P
Sbjct: 180 AQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 236
Query: 274 IPSGLPPA---VENVL-------LGCFEYD----LRSRPLMTDI 303
P A VE +L LGC E + L++ P +
Sbjct: 237 -EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 279
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 14/191 (7%)
Query: 123 IIMKFYEGSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGI--LQLHSKGILVLNLKPFNF 178
++M+F GD +L K + S R +D+A GI +Q + I+ +L+ N
Sbjct: 98 MVMEFV--PCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNI 155
Query: 179 ILNEADR--AVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDS 236
L D V V S L LG +MAPE E + + D+
Sbjct: 156 FLQSLDENAPVCAKVADFSLSQQSVHSVSGL---LGNFQWMAPETIGAEEES-YTEKADT 211
Query: 237 WGFACSIIEMLTGVQPRCGRSVDEI-YDAVVRRQEI-PPIPSGLPPAVENVLLGCFEYDL 294
+ FA + +LTG P S +I + ++R + + P IP PP + NV+ C+ D
Sbjct: 212 YSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDP 271
Query: 295 RSRPLMTDILR 305
+ RP + I++
Sbjct: 272 KKRPHFSYIVK 282
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 14/191 (7%)
Query: 123 IIMKFYEGSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGI--LQLHSKGILVLNLKPFNF 178
++M+F GD +L K + S R +D+A GI +Q + I+ +L+ N
Sbjct: 98 MVMEFV--PCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNI 155
Query: 179 ILNEADR--AVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDS 236
L D V V S L LG +MAPE E + + D+
Sbjct: 156 FLQSLDENAPVCAKVADFGTSQQSVHSVSGL---LGNFQWMAPETIGAEEES-YTEKADT 211
Query: 237 WGFACSIIEMLTGVQPRCGRSVDEI-YDAVVRRQEI-PPIPSGLPPAVENVLLGCFEYDL 294
+ FA + +LTG P S +I + ++R + + P IP PP + NV+ C+ D
Sbjct: 212 YSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDP 271
Query: 295 RSRPLMTDILR 305
+ RP + I++
Sbjct: 272 KKRPHFSYIVK 282
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 102/258 (39%), Gaps = 20/258 (7%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL-FLKCQGVEG 107
+G G FG+V + H L+ H+VAVKIL+ K + V+ + ++ LK
Sbjct: 19 LGVGTFGKVKIGEHQLTG------HKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L + ++M++ G G+ + K G++ R + + H
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSG--GELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N +L+ A + D L G+PNY APE +
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD----GEFLRTSCGSPNYAAPEVISGRL 186
Query: 227 R-GPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
GP E D W + +L G P V ++ + R + IP L +V +
Sbjct: 187 YAGP---EVDIWSCGVILYALLCGTLPFDDEHVPTLFKKI--RGGVFYIPEYLNRSVATL 241
Query: 286 LLGCFEYDLRSRPLMTDI 303
L+ + D R + DI
Sbjct: 242 LMHMLQVDPLKRATIKDI 259
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 95/249 (38%), Gaps = 24/249 (9%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFL----KCQG 104
IGRG FGEV L H ST A+K+L + +++R + F
Sbjct: 82 IGRGAFGEVQLVRHK-STRKV-----YAMKLLSKFE------MIKRSDSAFFWEERDIMA 129
Query: 105 VEGICWLQGISVI---NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGIL 161
W+ + + + ++M++ G GD + + + Y ++ +
Sbjct: 130 FANSPWVVQLFYAFQDDRYLYMVMEYMPG--GDLVNLMSNYDVPEKWARFYTAEVVLALD 187
Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
+HS G + ++KP N +L+++ L D D +GTP+Y++PE
Sbjct: 188 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA--VGTPDYISPEV 245
Query: 222 WQPE-VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP 280
+ + G E D W + EML G P S+ Y ++ + P
Sbjct: 246 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDI 305
Query: 281 AVENVLLGC 289
+ E L C
Sbjct: 306 SKEAKNLIC 314
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 95/249 (38%), Gaps = 24/249 (9%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFL----KCQG 104
IGRG FGEV L H ST A+K+L + +++R + F
Sbjct: 77 IGRGAFGEVQLVRH-KSTRKV-----YAMKLLSKFE------MIKRSDSAFFWEERDIMA 124
Query: 105 VEGICWLQGISVI---NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGIL 161
W+ + + + ++M++ G GD + + + Y ++ +
Sbjct: 125 FANSPWVVQLFYAFQDDRYLYMVMEYMPG--GDLVNLMSNYDVPEKWARFYTAEVVLALD 182
Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
+HS G + ++KP N +L+++ L D D +GTP+Y++PE
Sbjct: 183 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA--VGTPDYISPEV 240
Query: 222 WQPE-VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP 280
+ + G E D W + EML G P S+ Y ++ + P
Sbjct: 241 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDI 300
Query: 281 AVENVLLGC 289
+ E L C
Sbjct: 301 SKEAKNLIC 309
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 14/191 (7%)
Query: 123 IIMKFYEGSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGI--LQLHSKGILVLNLKPFNF 178
++M+F GD +L K + S R +D+A GI +Q + I+ +L+ N
Sbjct: 98 MVMEFV--PCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNI 155
Query: 179 ILNEADR--AVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDS 236
L D V V S L LG +MAPE E + + D+
Sbjct: 156 FLQSLDENAPVCAKVADFGLSQQSVHSVSGL---LGNFQWMAPETIGAEEES-YTEKADT 211
Query: 237 WGFACSIIEMLTGVQPRCGRSVDEI-YDAVVRRQEI-PPIPSGLPPAVENVLLGCFEYDL 294
+ FA + +LTG P S +I + ++R + + P IP PP + NV+ C+ D
Sbjct: 212 YSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDP 271
Query: 295 RSRPLMTDILR 305
+ RP + I++
Sbjct: 272 KKRPHFSYIVK 282
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 12/182 (6%)
Query: 118 NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR-YAIDLAQGILQLHS-KGILVLNLKP 175
+ ++C +M++ G G+ L ++ + R Y ++ + LHS K ++ +LK
Sbjct: 80 HDRLCFVMEYANG--GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKL 137
Query: 176 FNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETD 235
N +L++ + D + + GTP Y+APE + G D
Sbjct: 138 ENLMLDKDGHIKITDFGLCKEGIKD---GATMKXFCGTPEYLAPEVLEDNDYGRA---VD 191
Query: 236 SWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 295
WG + EM+ G P + +++++ ++ +EI P L P +++L G + D +
Sbjct: 192 WWGLGVVMYEMMCGRLPFYNQDHEKLFELIL-MEEI-RFPRTLGPEAKSLLSGLLKKDPK 249
Query: 296 SR 297
R
Sbjct: 250 QR 251
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 12/182 (6%)
Query: 118 NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR-YAIDLAQGILQLHS-KGILVLNLKP 175
+ ++C +M++ G G+ L ++ + R Y ++ + LHS K ++ +LK
Sbjct: 81 HDRLCFVMEYANG--GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKL 138
Query: 176 FNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETD 235
N +L++ + D + + GTP Y+APE + G D
Sbjct: 139 ENLMLDKDGHIKITDFGLCKEGIKD---GATMKXFCGTPEYLAPEVLEDNDYGRA---VD 192
Query: 236 SWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 295
WG + EM+ G P + +++++ ++ +EI P L P +++L G + D +
Sbjct: 193 WWGLGVVMYEMMCGRLPFYNQDHEKLFELIL-MEEI-RFPRTLGPEAKSLLSGLLKKDPK 250
Query: 296 SR 297
R
Sbjct: 251 QR 252
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 95/249 (38%), Gaps = 24/249 (9%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFL----KCQG 104
IGRG FGEV L H ST A+K+L + +++R + F
Sbjct: 82 IGRGAFGEVQLVRH-KSTRKV-----YAMKLLSKFE------MIKRSDSAFFWEERDIMA 129
Query: 105 VEGICWLQGISVI---NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGIL 161
W+ + + + ++M++ G GD + + + Y ++ +
Sbjct: 130 FANSPWVVQLFYAFQDDRYLYMVMEYMPG--GDLVNLMSNYDVPEKWARFYTAEVVLALD 187
Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
+HS G + ++KP N +L+++ L D D +GTP+Y++PE
Sbjct: 188 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA--VGTPDYISPEV 245
Query: 222 WQPE-VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP 280
+ + G E D W + EML G P S+ Y ++ + P
Sbjct: 246 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDI 305
Query: 281 AVENVLLGC 289
+ E L C
Sbjct: 306 SKEAKNLIC 314
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 110/283 (38%), Gaps = 27/283 (9%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC 102
LK ++G+G FG V + + ++ E VAVK L E+ +R + LK
Sbjct: 13 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFEREIE--ILKS 68
Query: 103 QGVEGICWLQGISVINGK--ICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
+ I +G+ G+ + +IM++ GS+ D + + K ++ + +Y + +G
Sbjct: 69 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKG 127
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
+ L +K + NL N ++ +R +GD + AP
Sbjct: 128 MEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAP 187
Query: 220 EQWQPEVRGPISFETDSWGFACSIIEMLTGVQP---------------RCGRSVDEIYDA 264
E S +D W F + E+ T ++ + G+ +
Sbjct: 188 ESL---TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 244
Query: 265 VVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI-LRV 306
+++ P P G P + ++ C+ ++ RP D+ LRV
Sbjct: 245 LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 287
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 12/182 (6%)
Query: 118 NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR-YAIDLAQGILQLHS-KGILVLNLKP 175
+ ++C +M++ G G+ L ++ + R Y ++ + LHS K ++ +LK
Sbjct: 82 HDRLCFVMEYANG--GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKL 139
Query: 176 FNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETD 235
N +L++ + D + + GTP Y+APE + G D
Sbjct: 140 ENLMLDKDGHIKITDFGLCKEGIKD---GATMKXFCGTPEYLAPEVLEDNDYGRA---VD 193
Query: 236 SWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 295
WG + EM+ G P + +++++ ++ +EI P L P +++L G + D +
Sbjct: 194 WWGLGVVMYEMMCGRLPFYNQDHEKLFELIL-MEEI-RFPRTLGPEAKSLLSGLLKKDPK 251
Query: 296 SR 297
R
Sbjct: 252 QR 253
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 115/296 (38%), Gaps = 33/296 (11%)
Query: 19 DDSDHLRT-AVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDE--YHEV 75
DD + L T AV SND LK IGRG F V+ L TE E + E+
Sbjct: 9 DDIEELETKAVGXSNDGRF------LKFDIEIGRGSFKTVYKG---LDTETTVEVAWCEL 59
Query: 76 AVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQG-ISVINGKICIIMKFYEGSVGD 134
+ L + R + E L L Q + + S + GK CI++ + G
Sbjct: 60 QDRKLTKSERQRFKEEAEXLKGL----QHPNIVRFYDSWESTVKGKKCIVLVTELXTSGT 115
Query: 135 RMAQLKGGKLSLSNVFR-YAIDLAQGILQLHSKG--ILVLNLKPFN-FILNEADRAVLGD 190
LK K+ V R + + +G+ LH++ I+ +LK N FI +GD
Sbjct: 116 LKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGD 175
Query: 191 VXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGV 250
+ + +GTP + APE ++ + + D + F +E T
Sbjct: 176 LGLATLKRASFAKAV-----IGTPEFXAPEXYEEKYDESV----DVYAFGXCXLEXATSE 226
Query: 251 QP--RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
P C ++ +IY V + P V+ ++ GC + R + D+L
Sbjct: 227 YPYSEC-QNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLL 281
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 104/255 (40%), Gaps = 23/255 (9%)
Query: 47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE 106
+IG+G G V+ A D EVA++ ++ ++ + +++ + L ++
Sbjct: 27 EKIGQGASGTVYTAM------DVATGQEVAIRQMNLQQQPKKELIINEI--LVMRENKNP 78
Query: 107 GICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS 165
I ++ ++ ++M++ G S+ D + + + ++ V R + Q + LHS
Sbjct: 79 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHS 135
Query: 166 KGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPE 225
++ N+K N +L L D S + +GTP +MAPE +
Sbjct: 136 NQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM---VGTPYWMAPEVVTRK 192
Query: 226 VRGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAVVRRQEIPPI--PSGLPPAV 282
GP + D W IEM+ G P + + +Y ++ P + P L
Sbjct: 193 AYGP---KVDIWSLGIMAIEMIEGEPPYLNENPLRALY--LIATNGTPELQNPEKLSAIF 247
Query: 283 ENVLLGCFEYDLRSR 297
+ L C E D+ R
Sbjct: 248 RDFLNRCLEMDVEKR 262
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 10/146 (6%)
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK- 166
I G +G+I I M+ +G D++ + K G++ + + +I + +G+ L K
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKH 151
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
I+ ++KP N ++N L D S +GT +YM+PE+ Q
Sbjct: 152 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF-----VGTRSYMSPERLQGT- 205
Query: 227 RGPISFETDSWGFACSIIEMLTGVQP 252
S ++D W S++EM G P
Sbjct: 206 --HYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 102/258 (39%), Gaps = 20/258 (7%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL-FLKCQGVEG 107
+G G FG+V + H L+ H+VAVKIL+ K + V+ + ++ LK
Sbjct: 19 LGVGTFGKVKIGEHQLTG------HKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L + ++M++ G G+ + K G++ R + + H
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSG--GELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ +LKP N +L+ A + D L G+PNY APE +
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD----GEFLRDSCGSPNYAAPEVISGRL 186
Query: 227 R-GPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 285
GP E D W + +L G P V ++ + R + IP L +V +
Sbjct: 187 YAGP---EVDIWSCGVILYALLCGTLPFDDEHVPTLFKKI--RGGVFYIPEYLNRSVATL 241
Query: 286 LLGCFEYDLRSRPLMTDI 303
L+ + D R + DI
Sbjct: 242 LMHMLQVDPLKRATIKDI 259
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 101/258 (39%), Gaps = 20/258 (7%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
+G+G FG V+LA S +A+K+L + ++ V + ++ ++
Sbjct: 21 LGKGKFGNVYLAREKQSK------FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G ++ +I+++ G+V + +L K Y +LA + HSK
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK 132
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ ++KP N +L A G++ SS GT +Y+ PE +
Sbjct: 133 RVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRX 187
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 286
+ D W E L G P + E Y + R + P + +++
Sbjct: 188 HDE---KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGARDLI 242
Query: 287 LGCFEYDLRSRPLMTDIL 304
+++ RP + ++L
Sbjct: 243 SRLLKHNPSQRPXLREVL 260
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 87/219 (39%), Gaps = 40/219 (18%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMRVLLERLN--- 96
+G G F V LA ++ E A+KIL H +KE+ R R ++ RL+
Sbjct: 45 LGEGSFSTVVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 97 --DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
L+ Q E + + G+S NG++ ++ K G + Y
Sbjct: 99 FVKLYFCFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGSFDETCTRFYT 143
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
++ + LH KGI+ +LKP N +LNE + D + +GT
Sbjct: 144 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGT 202
Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
Y++PE + S D W C I +++ G+ P
Sbjct: 203 AQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPP 238
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 106/258 (41%), Gaps = 23/258 (8%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC 102
LKL IG+G FG+V L + ++VAVK +K D + +
Sbjct: 195 LKLLQTIGKGEFGDVMLGDY--------RGNKVAVKC---IKNDATAQAFLAEASVMTQL 243
Query: 103 QGVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGIL 161
+ + L I G + I+ ++ +GS+ D + L + ++++D+ + +
Sbjct: 244 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 303
Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
L + +L N +++E + A + D + LP + P + ++
Sbjct: 304 YLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVKWTAPEALREKK 362
Query: 222 WQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP 280
+ S ++D W F + E+ + G P + ++ V + ++ P G PP
Sbjct: 363 F--------STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDA-PDGCPP 413
Query: 281 AVENVLLGCFEYDLRSRP 298
AV +V+ C+ D +RP
Sbjct: 414 AVYDVMKNCWHLDAATRP 431
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 10/146 (6%)
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK- 166
I G +G+I I M+ +G D++ + K G++ + + +I + +G+ L K
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKH 186
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
I+ ++KP N ++N L D S +GT +YM+PE+ Q
Sbjct: 187 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF-----VGTRSYMSPERLQ--- 238
Query: 227 RGPISFETDSWGFACSIIEMLTGVQP 252
S ++D W S++EM G P
Sbjct: 239 GTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 108/279 (38%), Gaps = 27/279 (9%)
Query: 43 LKLRHRIGRGPFGEVWLATHY-LSTEDCDEYHEVAVKILHPVKE-DRMRVLLERLNDLFL 100
L+ +G G FG+V AT + L ED +VAVK+L D L+ L +
Sbjct: 48 LQFGKTLGAGAFGKVVEATAFGLGKEDA--VLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 101 KCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLK---------------GGKLS 145
Q E I L G G + +I ++ GD + L+ LS
Sbjct: 106 LGQH-ENIVNLLGACTHGGPVLVITEY--CCYGDLLNFLRRKSRVLETDPAFAIANSTLS 162
Query: 146 LSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSS 205
++ ++ +AQG+ L SK + ++ N +L A +GD
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 206 DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDA 264
RL +MAPE V + ++D W + + E+ + G+ P G V+ +
Sbjct: 223 KGNARLPV-KWMAPESIFDCV---YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK 278
Query: 265 VVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
+V+ P+ P + +++ C+ + RP I
Sbjct: 279 LVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 317
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 10/146 (6%)
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK- 166
I G +G+I I M+ +G D++ + K G++ + + +I + +G+ L K
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
I+ ++KP N ++N L D S +GT +YM+PE+ Q
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF-----VGTRSYMSPERLQGT- 178
Query: 227 RGPISFETDSWGFACSIIEMLTGVQP 252
S ++D W S++EM G P
Sbjct: 179 --HYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 10/146 (6%)
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK- 166
I G +G+I I M+ +G D++ + K G++ + + +I + +G+ L K
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
I+ ++KP N ++N L D S +GT +YM+PE+ Q
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF-----VGTRSYMSPERLQGT- 178
Query: 227 RGPISFETDSWGFACSIIEMLTGVQP 252
S ++D W S++EM G P
Sbjct: 179 --HYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 10/136 (7%)
Query: 118 NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPF 176
+G+I I M+ +G D++ + K G++ + + +I + +G+ L K I+ ++KP
Sbjct: 76 DGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPS 134
Query: 177 NFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDS 236
N ++N L D S +GT +YM+PE+ Q S ++D
Sbjct: 135 NILVNSRGEIKLCDFGVSGQLIDSMANSF-----VGTRSYMSPERLQGT---HYSVQSDI 186
Query: 237 WGFACSIIEMLTGVQP 252
W S++EM G P
Sbjct: 187 WSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 10/136 (7%)
Query: 118 NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPF 176
+G+I I M+ +G D++ + K G++ + + +I + +G+ L K I+ ++KP
Sbjct: 76 DGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPS 134
Query: 177 NFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDS 236
N ++N L D S +GT +YM+PE+ Q S ++D
Sbjct: 135 NILVNSRGEIKLCDFGVSGQLIDSMANSF-----VGTRSYMSPERLQGT---HYSVQSDI 186
Query: 237 WGFACSIIEMLTGVQP 252
W S++EM G P
Sbjct: 187 WSMGLSLVEMAVGRYP 202
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 70/166 (42%), Gaps = 30/166 (18%)
Query: 123 IIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE 182
I+M++ G + + KG KL ++ Y +++ + LHS G++ +LKP N +L E
Sbjct: 161 IVMEYVGGQ---SLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTE 217
Query: 183 ADRAV--LGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFA 240
+ LG V + GTP + APE VR + TD +
Sbjct: 218 EQLKLIDLGAVSRI----------NSFGYLYGTPGFQAPEI----VRTGPTVATDIYTVG 263
Query: 241 CSIIEMLTGVQPRCGRSVD---------EIYDAVVR--RQEIPPIP 275
++ + + R GR VD + YD+ R R+ I P P
Sbjct: 264 RTLAALTLDLPTRNGRYVDGLPEDDPVLKTYDSYGRLLRRAIDPDP 309
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/312 (19%), Positives = 122/312 (39%), Gaps = 41/312 (13%)
Query: 27 AVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKED 86
A+A + + LK ++G+G FG V + + ++ E VAVK L E+
Sbjct: 2 AMAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEE 59
Query: 87 RMRVLLERLNDLFLKCQGVEGICWLQGISVINGK--ICIIMKFY-EGSVGDRMAQLKGGK 143
+R + LK + I +G+ G+ + +IM++ GS+ D + + K +
Sbjct: 60 HLRDFEREIE--ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-R 116
Query: 144 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 203
+ + +Y + +G+ L +K + +L N ++ +R +GD
Sbjct: 117 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGL---------- 166
Query: 204 SSDLPRRLGTPNYMAPEQ-----WQPE--VRGPISFETDSWGFACSIIEMLTGVQP---- 252
+ LP+ P + + PE S +D W F + E+ T ++
Sbjct: 167 TKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 226
Query: 253 -----------RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMT 301
+ G+ + +++ P P G P + ++ C+ ++ RP
Sbjct: 227 PAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFR 286
Query: 302 DI-LRVFKSSQN 312
D+ LRV + N
Sbjct: 287 DLALRVDQIRDN 298
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 40/234 (17%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL---HPVKED------RMRVLLERLN--- 96
+G G F LA ++ E A+KIL H +KE+ R R ++ RL+
Sbjct: 38 LGEGSFSTTVLARELATS------REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 97 --DLFLKCQGVEGICWLQGISVI-NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
L+ Q E + + G+S NG++ ++ K G + Y
Sbjct: 92 FVKLYFTFQDDEKLYF--GLSYAKNGELLKYIR-------------KIGSFDETCTRFYT 136
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
++ + LH KGI+ +LKP N +LNE + D + +GT
Sbjct: 137 AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGT 195
Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR 267
Y++PE + S D W C I +++ G+ P + I+ +++
Sbjct: 196 AQYVSPELLTEKSACKSS---DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK 246
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 7/147 (4%)
Query: 121 ICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI 179
I ++M++ +G + DR+ L + + + +GI +H IL L+LKP N +
Sbjct: 161 IVLVMEYVDGGELFDRIIDESYNLTELDTIL-FMKQICEGIRHMHQMYILHLDLKPENIL 219
Query: 180 LNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGF 239
D + + L GTP ++APE + +SF TD W
Sbjct: 220 CVNRDAKQIKIIDFGLARRYKPREK--LKVNFGTPEFLAPEVVNYDF---VSFPTDMWSV 274
Query: 240 ACSIIEMLTGVQPRCGRSVDEIYDAVV 266
+L+G+ P G + E + ++
Sbjct: 275 GVIAYMLLSGLSPFLGDNDAETLNNIL 301
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 110/286 (38%), Gaps = 32/286 (11%)
Query: 43 LKLRHRIGRGPFGEVWLATHY-LSTEDCDEYHEVAVKILHPVKE-DRMRVLLERLNDLFL 100
L+ +G G FG+V AT + L ED +VAVK+L D L+ L +
Sbjct: 33 LQFGKTLGAGAFGKVVEATAFGLGKEDA--VLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 101 KCQGVEGICWLQGISVINGKICIIMKF-------------YEGSVGDRMA---------Q 138
Q E I L G G + +I ++ E +G +A +
Sbjct: 91 LGQH-ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDK 149
Query: 139 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 198
G L L ++ ++ +AQG+ L SK + ++ N +L A +GD
Sbjct: 150 EDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 209
Query: 199 XXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRS 257
RL +MAPE V + ++D W + + E+ + G+ P G
Sbjct: 210 NDSNYIVKGNARLPV-KWMAPESIFDCV---YTVQSDVWSYGILLWEIFSLGLNPYPGIL 265
Query: 258 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
V+ + +V+ P+ P + +++ C+ + RP I
Sbjct: 266 VNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 311
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 109/286 (38%), Gaps = 37/286 (12%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
I S +K+ IG G FGEV + +L E VA+K L ++ R
Sbjct: 30 IDISCVKIEQVIGAGEFGEV--CSGHLKLPGKREIF-VAIKTLKSGYTEKQR-------R 79
Query: 98 LFLKCQGVEG------ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR 151
FL + G + L+G+ + + II +F E D + G+ ++ +
Sbjct: 80 DFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVG 139
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
+A G+ L + +L N ++N + D S L
Sbjct: 140 MLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGL----------SRFLEDDT 189
Query: 212 GTPNYMA------PEQWQ-PEVRGPISFET--DSWGFACSIIEMLT-GVQPRCGRSVDEI 261
P Y + P +W PE F + D W + + E+++ G +P + ++
Sbjct: 190 SDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDV 249
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
+A+ + +PP P P A+ ++L C++ D RP I+
Sbjct: 250 INAIEQDYRLPP-PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL 294
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 82/206 (39%), Gaps = 15/206 (7%)
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG 167
I L+G+ + + I+ ++ E D + + ++ + +A G+ L G
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 168 ILVLNLKPFNFILN-----EADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQW 222
+ +L N ++N + LG V +P R +P +A ++
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 223 QPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA 281
+ +D W + + E+++ G +P S ++ AV +PP P P A
Sbjct: 228 --------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAA 278
Query: 282 VENVLLGCFEYDLRSRPLMTDILRVF 307
+ ++L C++ D +RP I+ +
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 26/209 (12%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL------HPVKEDRMRVLLE-RLNDLFLK 101
IG+G FG+V + D + VA+K++ H + +R+L R D K
Sbjct: 105 IGKGSFGQV------VKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQD---K 155
Query: 102 CQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGIL 161
+ I L+ + N IC+ + ++ + + + K SL V ++A + Q +
Sbjct: 156 DNTMNVIHMLENFTFRN-HICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
LH I+ +LKP N +L + R+ + + + + R Y APE
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF----YRAPEV 270
Query: 222 WQPEVRG-PISFETDSWGFACSIIEMLTG 249
G PI D W C + E+LTG
Sbjct: 271 ILGARYGMPI----DMWSLGCILAELLTG 295
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 116/296 (39%), Gaps = 41/296 (13%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC 102
LK ++G+G FG V + + ++ E VAVK L E+ +R + LK
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFEREIE--ILKS 70
Query: 103 QGVEGICWLQGISVINGK--ICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
+ I +G+ G+ + +IM++ GS+ D + Q ++ + +Y + +G
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QAHAERIDHIKLLQYTSQICKG 129
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
+ L +K + +L N ++ +R +GD + LP+ P
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGL----------TKVLPQDKEXXKVKEP 179
Query: 220 EQ-----WQPE--VRGPISFETDSWGFACSIIEMLTGVQP---------------RCGRS 257
+ + PE S +D W F + E+ T ++ + G+
Sbjct: 180 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQM 239
Query: 258 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI-LRVFKSSQN 312
+ +++ P P G P + ++ C+ ++ RP D+ LRV + N
Sbjct: 240 IVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 295
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 26/209 (12%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL------HPVKEDRMRVLLE-RLNDLFLK 101
IG+G FG+V + D + VA+K++ H + +R+L R D K
Sbjct: 105 IGKGSFGQV------VKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQD---K 155
Query: 102 CQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGIL 161
+ I L+ + N IC+ + ++ + + + K SL V ++A + Q +
Sbjct: 156 DNTMNVIHMLENFTFRN-HICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
LH I+ +LKP N +L + R+ + + + + R Y APE
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF----YRAPEV 270
Query: 222 WQPEVRG-PISFETDSWGFACSIIEMLTG 249
G PI D W C + E+LTG
Sbjct: 271 ILGARYGMPI----DMWSLGCILAELLTG 295
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 115/290 (39%), Gaps = 41/290 (14%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC 102
LK ++G+G FG V + + ++ E VAVK L E+ +R + LK
Sbjct: 19 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFEREIE--ILKS 74
Query: 103 QGVEGICWLQGISVINGK--ICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
+ I +G+ G+ + +IM++ GS+ D + + K ++ + +Y + +G
Sbjct: 75 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKG 133
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
+ L +K + +L N ++ +R +GD + LP+ P
Sbjct: 134 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGL----------TKVLPQDKEXXKVKEP 183
Query: 220 EQ-----WQPE--VRGPISFETDSWGFACSIIEMLTGVQP---------------RCGRS 257
+ + PE S +D W F + E+ T ++ + G+
Sbjct: 184 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQM 243
Query: 258 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI-LRV 306
+ +++ P P G P + ++ C+ ++ RP D+ LRV
Sbjct: 244 IVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 293
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 117/296 (39%), Gaps = 41/296 (13%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC 102
LK ++G+G FG V + + ++ E VAVK L E+ +R + LK
Sbjct: 30 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFEREIE--ILKS 85
Query: 103 QGVEGICWLQGISVINGK--ICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
+ I +G+ G+ + +IM++ GS+ D + + K ++ + +Y + +G
Sbjct: 86 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKG 144
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
+ L +K + +L N ++ +R +GD + LP+ P
Sbjct: 145 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGL----------TKVLPQDKEXXKVKEP 194
Query: 220 EQ-----WQPE--VRGPISFETDSWGFACSIIEMLTGVQP---------------RCGRS 257
+ + PE S +D W F + E+ T ++ + G+
Sbjct: 195 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQM 254
Query: 258 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI-LRVFKSSQN 312
+ +++ P P G P + ++ C+ ++ RP D+ LRV + N
Sbjct: 255 IVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 310
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 117/296 (39%), Gaps = 41/296 (13%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC 102
LK ++G+G FG V + + ++ E VAVK L E+ +R + LK
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFEREIE--ILKS 67
Query: 103 QGVEGICWLQGISVINGK--ICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
+ I +G+ G+ + +IM++ GS+ D + + K ++ + +Y + +G
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKG 126
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
+ L +K + +L N ++ +R +GD + LP+ P
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGL----------TKVLPQDKEXXKVKEP 176
Query: 220 EQ-----WQPE--VRGPISFETDSWGFACSIIEMLTGVQP---------------RCGRS 257
+ + PE S +D W F + E+ T ++ + G+
Sbjct: 177 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQM 236
Query: 258 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI-LRVFKSSQN 312
+ +++ P P G P + ++ C+ ++ RP D+ LRV + N
Sbjct: 237 IVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 108/263 (41%), Gaps = 23/263 (8%)
Query: 47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE 106
+IG+G G V+ A D EVA++ ++ ++ + +++ + L ++
Sbjct: 26 EKIGQGASGTVYTAM------DVATGQEVAIRQMNLQQQPKKELIINEI--LVMRENKNP 77
Query: 107 GICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS 165
I ++ ++ ++M++ G S+ D + + + ++ V R + Q + LHS
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHS 134
Query: 166 KGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPE 225
++ ++K N +L L D S + +GTP +MAPE +
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXM---VGTPYWMAPEVVTRK 191
Query: 226 VRGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAVVRRQEIPPI--PSGLPPAV 282
GP + D W IEM+ G P + + +Y ++ P + P L
Sbjct: 192 AYGP---KVDIWSLGIMAIEMIEGEPPYLNENPLRALY--LIATNGTPELQNPEKLSAIF 246
Query: 283 ENVLLGCFEYDLRSRPLMTDILR 305
+ L C E D+ R ++L+
Sbjct: 247 RDFLNRCLEMDVEKRGSAKELLQ 269
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 96/236 (40%), Gaps = 27/236 (11%)
Query: 47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE 106
++G G +G V+ A H + + VA+K + PV+ D ++ E + +C
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQI------VAIKQV-PVESDLQEIIKEI--SIMQQCDSPH 85
Query: 107 GICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS 165
+ + G N + I+M++ GSV D + +L+ L+ + +G+ LH
Sbjct: 86 VVKYY-GSYFKNTDLWIVMEYCGAGSVSD-IIRLRNKTLTEDEIATILQSTLKGLEYLHF 143
Query: 166 KGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPE 225
+ ++K N +LN A L D + + +GTP +MAPE Q
Sbjct: 144 MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXV---IGTPFWMAPEVIQEI 200
Query: 226 VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA 281
++ D W + IEM G P Y + + I IP+ PP
Sbjct: 201 GYNCVA---DIWSLGITAIEMAEGKPP---------YADIHPMRAIFMIPTNPPPT 244
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 117/296 (39%), Gaps = 41/296 (13%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC 102
LK ++G+G FG V + + ++ E VAVK L E+ +R + LK
Sbjct: 17 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFEREIE--ILKS 72
Query: 103 QGVEGICWLQGISVINGK--ICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
+ I +G+ G+ + +IM++ GS+ D + + K ++ + +Y + +G
Sbjct: 73 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKG 131
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
+ L +K + +L N ++ +R +GD + LP+ P
Sbjct: 132 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGL----------TKVLPQDKEXXKVKEP 181
Query: 220 EQ-----WQPE--VRGPISFETDSWGFACSIIEMLTGVQP---------------RCGRS 257
+ + PE S +D W F + E+ T ++ + G+
Sbjct: 182 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQM 241
Query: 258 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI-LRVFKSSQN 312
+ +++ P P G P + ++ C+ ++ RP D+ LRV + N
Sbjct: 242 IVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 297
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 117/296 (39%), Gaps = 41/296 (13%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC 102
LK ++G+G FG V + + ++ E VAVK L E+ +R + LK
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFEREIE--ILKS 70
Query: 103 QGVEGICWLQGISVINGK--ICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
+ I +G+ G+ + +IM++ GS+ D + + K ++ + +Y + +G
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKG 129
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
+ L +K + +L N ++ +R +GD + LP+ P
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGL----------TKVLPQDKEXXKVKEP 179
Query: 220 EQ-----WQPE--VRGPISFETDSWGFACSIIEMLTGVQP---------------RCGRS 257
+ + PE S +D W F + E+ T ++ + G+
Sbjct: 180 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQM 239
Query: 258 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI-LRVFKSSQN 312
+ +++ P P G P + ++ C+ ++ RP D+ LRV + N
Sbjct: 240 IVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 295
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 109/263 (41%), Gaps = 23/263 (8%)
Query: 47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE 106
+IG+G G V+ A D EVA++ ++ ++ + +++ + L ++
Sbjct: 26 EKIGQGASGTVYTAM------DVATGQEVAIRQMNLQQQPKKELIINEI--LVMRENKNP 77
Query: 107 GICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS 165
I ++ ++ ++M++ G S+ D + + + ++ V R + Q + LHS
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHS 134
Query: 166 KGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPE 225
++ ++K N +L L D S++ +GTP +MAPE +
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEM---VGTPYWMAPEVVTRK 191
Query: 226 VRGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAVVRRQEIPPI--PSGLPPAV 282
GP + D W IEM+ G P + + +Y ++ P + P L
Sbjct: 192 AYGP---KVDIWSLGIMAIEMIEGEPPYLNENPLRALY--LIATNGTPELQNPEKLSAIF 246
Query: 283 ENVLLGCFEYDLRSRPLMTDILR 305
+ L C + D+ R ++L+
Sbjct: 247 RDFLNRCLDMDVEKRGSAKELLQ 269
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 104/288 (36%), Gaps = 55/288 (19%)
Query: 38 IKPSALKLRHRIGRGPFGEV----WLATH----------YLSTEDCDEYHEVAVKILHPV 83
I PS L IG G FG V WL +S ED E EV +K+ HP
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHP- 62
Query: 84 KEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK 143
+L L+ G+C Q IC++ +F E + + G
Sbjct: 63 ----------KLVQLY-------GVCLEQ------APICLVFEFMEHGCLSDYLRTQRGL 99
Query: 144 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 203
+ + +D+ +G+ L ++ +L N ++ E + D
Sbjct: 100 FAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 159
Query: 204 SS---DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 259
SS P + +P + ++ S ++D W F + E+ + G P RS
Sbjct: 160 SSTGTKFPVKWASPEVFSFSRY--------SSKSDVWSFGVLMWEVFSEGKIPYENRSNS 211
Query: 260 EIYDAVVR--RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
E+ + + R P + S V ++ C++ RP + +LR
Sbjct: 212 EVVEDISTGFRLYKPRLAS---THVYQIMNHCWKERPEDRPAFSRLLR 256
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 115/290 (39%), Gaps = 41/290 (14%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC 102
LK ++G+G FG V + + ++ E VAVK L E+ +R + LK
Sbjct: 43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFEREIE--ILKS 98
Query: 103 QGVEGICWLQGISVINGK--ICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
+ I +G+ G+ + +IM++ GS+ D + + K ++ + +Y + +G
Sbjct: 99 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKG 157
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
+ L +K + +L N ++ +R +GD + LP+ P
Sbjct: 158 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGL----------TKVLPQDKEXXKVKEP 207
Query: 220 EQ-----WQPE--VRGPISFETDSWGFACSIIEMLTGVQP---------------RCGRS 257
+ + PE S +D W F + E+ T ++ + G+
Sbjct: 208 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQM 267
Query: 258 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI-LRV 306
+ +++ P P G P + ++ C+ ++ RP D+ LRV
Sbjct: 268 IVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 317
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 102/258 (39%), Gaps = 29/258 (11%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
R+GRG FGEV H + ED + AVK ++R+ + R +L + C G+
Sbjct: 100 RLGRGSFGEV----HRM--EDKQTGFQCAVK--------KVRLEVFRAEEL-MACAGLTS 144
Query: 108 --ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS 165
I L G + I M+ EG ++ + +G L Y +G+ LHS
Sbjct: 145 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGC-LPEDRALYYLGQALEGLEYLHS 203
Query: 166 KGILVLNLKPFNFIL-NEADRAVLGDVXXXXXXXXXXXXSSDLPRRL--GTPNYMAPEQW 222
+ IL ++K N +L ++ A L D S L GT +MAPE
Sbjct: 204 RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEV- 262
Query: 223 QPEVRG-PISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA 281
V G + D W C ++ ML G P + + E PP+ +PP+
Sbjct: 263 ---VLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIA--SEPPPVRE-IPPS 316
Query: 282 VENVLLGCFEYDLRSRPL 299
+ + LR P+
Sbjct: 317 CAPLTAQAIQEGLRKEPI 334
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 117/296 (39%), Gaps = 41/296 (13%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC 102
LK ++G+G FG V + + ++ E VAVK L E+ +R + LK
Sbjct: 30 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFEREIE--ILKS 85
Query: 103 QGVEGICWLQGISVINGK--ICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
+ I +G+ G+ + +IM++ GS+ D + + K ++ + +Y + +G
Sbjct: 86 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKG 144
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
+ L +K + +L N ++ +R +GD + LP+ P
Sbjct: 145 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGL----------TKVLPQDKEXXKVKEP 194
Query: 220 EQ-----WQPE--VRGPISFETDSWGFACSIIEMLTGVQP---------------RCGRS 257
+ + PE S +D W F + E+ T ++ + G+
Sbjct: 195 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQM 254
Query: 258 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI-LRVFKSSQN 312
+ +++ P P G P + ++ C+ ++ RP D+ LRV + N
Sbjct: 255 IVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 310
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 115/290 (39%), Gaps = 41/290 (14%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC 102
LK ++G+G FG V + + ++ E VAVK L E+ +R + LK
Sbjct: 10 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFEREIE--ILKS 65
Query: 103 QGVEGICWLQGISVINGK--ICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
+ I +G+ G+ + +IM++ GS+ D + + K ++ + +Y + +G
Sbjct: 66 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKG 124
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
+ L +K + +L N ++ +R +GD + LP+ P
Sbjct: 125 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGL----------TKVLPQDKEXXKVKEP 174
Query: 220 EQ-----WQPE--VRGPISFETDSWGFACSIIEMLTGVQP---------------RCGRS 257
+ + PE S +D W F + E+ T ++ + G+
Sbjct: 175 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQM 234
Query: 258 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI-LRV 306
+ +++ P P G P + ++ C+ ++ RP D+ LRV
Sbjct: 235 IVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 284
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 117/296 (39%), Gaps = 41/296 (13%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC 102
LK ++G+G FG V + + ++ E VAVK L E+ +R + LK
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFEREIE--ILKS 67
Query: 103 QGVEGICWLQGISVINGK--ICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
+ I +G+ G+ + +IM++ GS+ D + + K ++ + +Y + +G
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKG 126
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
+ L +K + +L N ++ +R +GD + LP+ P
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGL----------TKVLPQDKEXXKVKEP 176
Query: 220 EQ-----WQPE--VRGPISFETDSWGFACSIIEMLTGVQP---------------RCGRS 257
+ + PE S +D W F + E+ T ++ + G+
Sbjct: 177 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQM 236
Query: 258 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI-LRVFKSSQN 312
+ +++ P P G P + ++ C+ ++ RP D+ LRV + N
Sbjct: 237 IVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 90/215 (41%), Gaps = 18/215 (8%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPV--KEDRMRVLLERL 95
+K L+ +GRG +G V H S + +AVK + +++ R+L++
Sbjct: 4 VKADDLEPIMELGRGAYGVVEKMRHVPSGQ------IMAVKRIRATVNSQEQKRLLMDL- 56
Query: 96 NDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL--KGGKLSLSNVFRYA 153
D+ ++ G G + I M+ + S+ Q+ KG + + + A
Sbjct: 57 -DISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIA 115
Query: 154 IDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLG 212
+ + + + LHSK ++ ++KP N ++N + + D D G
Sbjct: 116 VSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA----G 171
Query: 213 TPNYMAPEQWQPEVRGP-ISFETDSWGFACSIIEM 246
YMAPE+ PE+ S ++D W ++IE+
Sbjct: 172 CKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 117/296 (39%), Gaps = 41/296 (13%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC 102
LK ++G+G FG V + + ++ E VAVK L E+ +R + LK
Sbjct: 16 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFEREIE--ILKS 71
Query: 103 QGVEGICWLQGISVINGK--ICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
+ I +G+ G+ + +IM++ GS+ D + + K ++ + +Y + +G
Sbjct: 72 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKG 130
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
+ L +K + +L N ++ +R +GD + LP+ P
Sbjct: 131 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGL----------TKVLPQDKEXXKVKEP 180
Query: 220 EQ-----WQPE--VRGPISFETDSWGFACSIIEMLTGVQP---------------RCGRS 257
+ + PE S +D W F + E+ T ++ + G+
Sbjct: 181 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQM 240
Query: 258 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI-LRVFKSSQN 312
+ +++ P P G P + ++ C+ ++ RP D+ LRV + N
Sbjct: 241 IVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 296
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 117/296 (39%), Gaps = 41/296 (13%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC 102
LK ++G+G FG V + + ++ E VAVK L E+ +R + LK
Sbjct: 11 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFEREIE--ILKS 66
Query: 103 QGVEGICWLQGISVINGK--ICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
+ I +G+ G+ + +IM++ GS+ D + + K ++ + +Y + +G
Sbjct: 67 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKG 125
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
+ L +K + +L N ++ +R +GD + LP+ P
Sbjct: 126 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGL----------TKVLPQDKEXXKVKEP 175
Query: 220 EQ-----WQPE--VRGPISFETDSWGFACSIIEMLTGVQP---------------RCGRS 257
+ + PE S +D W F + E+ T ++ + G+
Sbjct: 176 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQM 235
Query: 258 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI-LRVFKSSQN 312
+ +++ P P G P + ++ C+ ++ RP D+ LRV + N
Sbjct: 236 IVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 291
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 89/230 (38%), Gaps = 18/230 (7%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE-RLNDLFLK--CQGV 105
IG+G FG+V + D E VA+KI+ K + +E RL +L K +
Sbjct: 43 IGKGSFGQV------VKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMK 96
Query: 106 EGICWLQGISVINGKICIIMKFYEGSVGD--RMAQLKGGKLSLSNVFRYAIDLAQGILQL 163
I L+ + +C++ + ++ D R +G L+L+ F + A L
Sbjct: 97 YYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT 156
Query: 164 HSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQ 223
I+ +LKP N +L R+ + V + R Y +PE
Sbjct: 157 PELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRF----YRSPEVL- 211
Query: 224 PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP 273
+ P D W C ++EM TG G + + + +V IPP
Sbjct: 212 --LGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPP 259
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 74/179 (41%), Gaps = 6/179 (3%)
Query: 120 KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI 179
K+ ++M++ + + + + + + Y L G+ LHS+GI+ ++KP N +
Sbjct: 82 KMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLL 141
Query: 180 LNEADRAVLGDVXXXXXXXXXXXXSSDLPR-RLGTPNYMAPEQWQPEVRGPISFETDSWG 238
L L + D R G+P + PE + F+ D W
Sbjct: 142 LTTG--GTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIAN-GLDTFSGFKVDIWS 198
Query: 239 FACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 297
++ + TG+ P G ++ ++++ + + IP P + ++L G EY+ R
Sbjct: 199 AGVTLYNITTGLYPFEGDNIYKLFENIGKGSYA--IPGDCGPPLSDLLKGMLEYEPAKR 255
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 104/288 (36%), Gaps = 55/288 (19%)
Query: 38 IKPSALKLRHRIGRGPFGEV----WLATH----------YLSTEDCDEYHEVAVKILHPV 83
I PS L IG G FG V WL +S ED E EV +K+ HP
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHP- 62
Query: 84 KEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK 143
+L L+ G+C Q IC++ +F E + + G
Sbjct: 63 ----------KLVQLY-------GVCLEQ------APICLVFEFMEHGCLSDYLRTQRGL 99
Query: 144 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 203
+ + +D+ +G+ L ++ +L N ++ E + D
Sbjct: 100 FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 159
Query: 204 SS---DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 259
SS P + +P + ++ S ++D W F + E+ + G P RS
Sbjct: 160 SSTGTKFPVKWASPEVFSFSRY--------SSKSDVWSFGVLMWEVFSEGKIPYENRSNS 211
Query: 260 EIYDAVVR--RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
E+ + + R P + S V ++ C++ RP + +LR
Sbjct: 212 EVVEDISTGFRLYKPRLAS---THVYQIMNHCWKERPEDRPAFSRLLR 256
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 108/286 (37%), Gaps = 37/286 (12%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLND 97
I S +K+ IG G FGEV + +L E VA+K L ++ R
Sbjct: 4 IDISCVKIEQVIGAGEFGEV--CSGHLKLPGKREIF-VAIKTLKSGYTEKQR-------R 53
Query: 98 LFLKCQGVEG------ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFR 151
FL + G + L+G+ + + II +F E D + G+ ++ +
Sbjct: 54 DFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVG 113
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
+A G+ L + L N ++N + D S L
Sbjct: 114 MLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGL----------SRFLEDDT 163
Query: 212 GTPNYMA------PEQWQ-PEVRGPISFET--DSWGFACSIIEMLT-GVQPRCGRSVDEI 261
P Y + P +W PE F + D W + + E+++ G +P + ++
Sbjct: 164 SDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDV 223
Query: 262 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
+A+ + +PP P P A+ ++L C++ D RP I+
Sbjct: 224 INAIEQDYRLPP-PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL 268
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 89/230 (38%), Gaps = 18/230 (7%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE-RLNDLFLK--CQGV 105
IG+G FG+V + D E VA+KI+ K + +E RL +L K +
Sbjct: 62 IGKGSFGQV------VKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMK 115
Query: 106 EGICWLQGISVINGKICIIMKFYEGSVGD--RMAQLKGGKLSLSNVFRYAIDLAQGILQL 163
I L+ + +C++ + ++ D R +G L+L+ F + A L
Sbjct: 116 YYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT 175
Query: 164 HSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQ 223
I+ +LKP N +L R+ + V + R Y +PE
Sbjct: 176 PELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRF----YRSPEVL- 230
Query: 224 PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP 273
+ P D W C ++EM TG G + + + +V IPP
Sbjct: 231 --LGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPP 278
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 116/290 (40%), Gaps = 41/290 (14%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC 102
LK ++G+G FG V + + ++ E VAVK L E+ +R + LK
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFEREIE--ILKS 67
Query: 103 QGVEGICWLQGISVINGK--ICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
+ I +G+ G+ + +IM++ GS+ D + + K ++ + +Y + +G
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKG 126
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPR-----RLGTP 214
+ L +K + +L N ++ +R +GD + LP+ ++ P
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGL----------TKVLPQDKEFFKVKEP 176
Query: 215 NYMAPEQWQPE--VRGPISFETDSWGFACSIIEMLTGVQP---------------RCGRS 257
+ PE S +D W F + E+ T ++ + G+
Sbjct: 177 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQM 236
Query: 258 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI-LRV 306
+ +++ P P G P + ++ C+ ++ RP D+ LRV
Sbjct: 237 IVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 286
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 104/255 (40%), Gaps = 23/255 (9%)
Query: 47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE 106
+IG+G G V+ A D EVA++ ++ ++ + +++ + L ++
Sbjct: 27 EKIGQGASGTVYTAM------DVATGQEVAIRQMNLQQQPKKELIINEI--LVMRENKNP 78
Query: 107 GICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS 165
I ++ ++ ++M++ G S+ D + + + ++ V R + Q + LHS
Sbjct: 79 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHS 135
Query: 166 KGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPE 225
++ ++K N +L L D S + +GTP +MAPE +
Sbjct: 136 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXM---VGTPYWMAPEVVTRK 192
Query: 226 VRGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAVVRRQEIPPI--PSGLPPAV 282
GP + D W IEM+ G P + + +Y ++ P + P L
Sbjct: 193 AYGP---KVDIWSLGIMAIEMIEGEPPYLNENPLRALY--LIATNGTPELQNPEKLSAIF 247
Query: 283 ENVLLGCFEYDLRSR 297
+ L C E D+ R
Sbjct: 248 RDFLNRCLEMDVEKR 262
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 89/229 (38%), Gaps = 20/229 (8%)
Query: 45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQG 104
R +G G F EV LA ED VA+K + + +E + K +
Sbjct: 22 FRDVLGTGAFSEVILA------EDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKH 75
Query: 105 VEGICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQL 163
I L I G + +IM+ G + DR+ + G + + R + + L
Sbjct: 76 -PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVE--KGFYTERDASRLIFQVLDAVKYL 132
Query: 164 HSKGILVLNLKPFNFI---LNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPE 220
H GI+ +LKP N + L+E + ++ D S L GTP Y+APE
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDF----GLSKMEDPGSVLSTACGTPGYVAPE 188
Query: 221 QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ 269
+ P S D W +L G P + ++++ +++ +
Sbjct: 189 VL---AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAE 234
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 109/281 (38%), Gaps = 29/281 (10%)
Query: 43 LKLRHRIGRGPFGEVWLATHY-LSTEDCDEYHEVAVKILHPVKE-DRMRVLLERLNDLFL 100
L+ +G G FG+V AT + L ED +VAVK+L D L+ L +
Sbjct: 48 LQFGKTLGAGAFGKVVEATAFGLGKEDA--VLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 101 KCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK----------------- 143
Q E I L G G + +I ++ GD + L+ +
Sbjct: 106 LGQH-ENIVNLLGACTHGGPVLVITEY--CCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQ 162
Query: 144 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 203
LS ++ ++ +AQG+ L SK + ++ N +L A +GD
Sbjct: 163 LSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 222
Query: 204 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY 262
RL +MAPE V + ++D W + + E+ + G+ P G V+ +
Sbjct: 223 IVKGNARLPV-KWMAPESIFDCV---YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF 278
Query: 263 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
+V+ P+ P + +++ C+ + RP I
Sbjct: 279 YKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 319
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 104/258 (40%), Gaps = 23/258 (8%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC 102
LKL IG+G FG+V L + ++VAVK +K D + +
Sbjct: 14 LKLLQTIGKGEFGDVMLGDY--------RGNKVAVKC---IKNDATAQAFLAEASVMTQL 62
Query: 103 QGVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGIL 161
+ + L I G + I+ ++ +GS+ D + L + ++++D+ + +
Sbjct: 63 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 122
Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
L + +L N +++E + A + D + LP + + APE
Sbjct: 123 YLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVK-----WTAPEA 176
Query: 222 WQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP 280
+ S ++D W F + E+ + G P + ++ V + ++ P G PP
Sbjct: 177 LR---EAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDA-PDGCPP 232
Query: 281 AVENVLLGCFEYDLRSRP 298
AV V+ C+ D RP
Sbjct: 233 AVYEVMKNCWHLDAAMRP 250
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 104/288 (36%), Gaps = 55/288 (19%)
Query: 38 IKPSALKLRHRIGRGPFGEV----WLATH----------YLSTEDCDEYHEVAVKILHPV 83
I PS L IG G FG V WL +S ED E EV +K+ HP
Sbjct: 2 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHP- 60
Query: 84 KEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK 143
+L L+ G+C Q IC++ +F E + + G
Sbjct: 61 ----------KLVQLY-------GVCLEQ------APICLVFEFMEHGCLSDYLRTQRGL 97
Query: 144 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 203
+ + +D+ +G+ L ++ +L N ++ E + D
Sbjct: 98 FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 157
Query: 204 SS---DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 259
SS P + +P + ++ S ++D W F + E+ + G P RS
Sbjct: 158 SSTGTKFPVKWASPEVFSFSRY--------SSKSDVWSFGVLMWEVFSEGKIPYENRSNS 209
Query: 260 EIYDAVVR--RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
E+ + + R P + S V ++ C++ RP + +LR
Sbjct: 210 EVVEDISTGFRLYKPRLAS---THVYQIMNHCWKERPEDRPAFSRLLR 254
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 103/288 (35%), Gaps = 55/288 (19%)
Query: 38 IKPSALKLRHRIGRGPFGEV----WLATH----------YLSTEDCDEYHEVAVKILHPV 83
I PS L IG G FG V WL +S ED E EV +K+ HP
Sbjct: 7 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHP- 65
Query: 84 KEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK 143
+L L+ G+C Q IC++ +F E + + G
Sbjct: 66 ----------KLVQLY-------GVCLEQ------APICLVFEFMEHGCLSDYLRTQRGL 102
Query: 144 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 203
+ + +D+ +G+ L ++ +L N ++ E + D
Sbjct: 103 FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 162
Query: 204 SS---DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 259
SS P + +P + ++ S ++D W F + E+ + G P RS
Sbjct: 163 SSTGTKFPVKWASPEVFSFSRY--------SSKSDVWSFGVLMWEVFSEGKIPYENRSNS 214
Query: 260 EIYDAVVR--RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
E+ + + R P + S V ++ C+ RP + +LR
Sbjct: 215 EVVEDISTGFRLYKPRLAS---THVYQIMNHCWRERPEDRPAFSRLLR 259
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 104/258 (40%), Gaps = 23/258 (8%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC 102
LKL IG+G FG+V L + ++VAVK +K D + +
Sbjct: 23 LKLLQTIGKGEFGDVMLGDY--------RGNKVAVKC---IKNDATAQAFLAEASVMTQL 71
Query: 103 QGVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGIL 161
+ + L I G + I+ ++ +GS+ D + L + ++++D+ + +
Sbjct: 72 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 131
Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
L + +L N +++E + A + D + LP + P + ++
Sbjct: 132 YLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVKWTAPEALREKK 190
Query: 222 WQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP 280
+ S ++D W F + E+ + G P + ++ V + ++ P G PP
Sbjct: 191 F--------STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDA-PDGCPP 241
Query: 281 AVENVLLGCFEYDLRSRP 298
AV V+ C+ D RP
Sbjct: 242 AVYEVMKNCWHLDAAMRP 259
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 85/209 (40%), Gaps = 26/209 (12%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL------HPVKEDRMRVLLE-RLNDLFLK 101
IG+G FG+V + D + VA+K++ H + +R+L R D K
Sbjct: 105 IGKGXFGQV------VKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQD---K 155
Query: 102 CQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGIL 161
+ I L+ + N IC+ + ++ + + + K SL V ++A + Q +
Sbjct: 156 DNTMNVIHMLENFTFRN-HICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
LH I+ +LKP N +L + R+ + + + R Y APE
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRF----YRAPEV 270
Query: 222 WQPEVRG-PISFETDSWGFACSIIEMLTG 249
G PI D W C + E+LTG
Sbjct: 271 ILGARYGMPI----DMWSLGCILAELLTG 295
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/207 (18%), Positives = 81/207 (39%), Gaps = 15/207 (7%)
Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L+G+ + + I+ ++ E D + + ++ + +A G+ L
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 167 GILVLNLKPFNFILNEADRAVLGD-----VXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
G + +L N ++N + D V +P R +P +A +
Sbjct: 167 GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 222 WQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP 280
+ + +D W + + E+++ G +P S ++ AV +PP P P
Sbjct: 227 F--------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPA 277
Query: 281 AVENVLLGCFEYDLRSRPLMTDILRVF 307
A+ ++L C++ D +RP I+ +
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 108/263 (41%), Gaps = 23/263 (8%)
Query: 47 HRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE 106
+IG+G G V+ A D EVA++ ++ ++ + +++ + L ++
Sbjct: 26 EKIGQGASGTVYTAM------DVATGQEVAIRQMNLQQQPKKELIINEI--LVMRENKNP 77
Query: 107 GICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS 165
I ++ ++ ++M++ G S+ D + + + ++ V R + Q + LHS
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHS 134
Query: 166 KGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPE 225
++ ++K N +L L D S + +GTP +MAPE +
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM---VGTPYWMAPEVVTRK 191
Query: 226 VRGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAVVRRQEIPPI--PSGLPPAV 282
GP + D W IEM+ G P + + +Y ++ P + P L
Sbjct: 192 AYGP---KVDIWSLGIMAIEMIEGEPPYLNENPLRALY--LIATNGTPELQNPEKLSAIF 246
Query: 283 ENVLLGCFEYDLRSRPLMTDILR 305
+ L C + D+ R ++L+
Sbjct: 247 RDFLNRCLDMDVEKRGSAKELLQ 269
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 117/296 (39%), Gaps = 41/296 (13%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC 102
LK ++G+G FG V + + ++ E VAVK L E+ +R + LK
Sbjct: 15 LKFLRQLGKGNFGSVEMCRYDPLQDNTGEV--VAVKKLQHSTEEHLRDFEREIE--ILKS 70
Query: 103 QGVEGICWLQGISVINGK--ICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
+ I +G+ G+ + +IM+F GS+ + + + K ++ + +Y + +G
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKE-RIDHIKLLQYTSQICKG 129
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
+ L +K + +L N ++ +R +GD + LP+ P
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGL----------TKVLPQDKEXXKVKEP 179
Query: 220 EQ-----WQPE--VRGPISFETDSWGFACSIIEMLTGVQP---------------RCGRS 257
+ + PE S +D W F + E+ T ++ + G+
Sbjct: 180 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQM 239
Query: 258 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI-LRVFKSSQN 312
+ +++ P P G P + ++ C+ ++ RP D+ LRV + N
Sbjct: 240 IVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 295
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 107/279 (38%), Gaps = 27/279 (9%)
Query: 43 LKLRHRIGRGPFGEVWLATHY-LSTEDCDEYHEVAVKILHPVKE-DRMRVLLERLNDLFL 100
L+ +G G FG+V AT + L ED +VAVK+L D L+ L +
Sbjct: 48 LQFGKTLGAGAFGKVVEATAFGLGKEDA--VLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 101 KCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLK---------------GGKLS 145
Q E I L G G + +I ++ GD + L+ S
Sbjct: 106 LGQH-ENIVNLLGACTHGGPVLVITEY--CCYGDLLNFLRRKSRVLETDPAFAIANSTAS 162
Query: 146 LSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSS 205
++ ++ +AQG+ L SK + ++ N +L A +GD
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 206 DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDA 264
RL +MAPE V + ++D W + + E+ + G+ P G V+ +
Sbjct: 223 KGNARLPV-KWMAPESIFDCV---YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK 278
Query: 265 VVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 303
+V+ P+ P + +++ C+ + RP I
Sbjct: 279 LVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 317
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 5/131 (3%)
Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 189
G + D +AQ + LS + + G+ LH+K I +LKP N +L + + +
Sbjct: 100 GELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPH 157
Query: 190 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ GTP ++APE E P+ E D W +L+G
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 214
Query: 250 VQPRCGRSVDE 260
P G + E
Sbjct: 215 ASPFLGDTKQE 225
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 9/150 (6%)
Query: 120 KICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNF 178
++ +I++F G + DR+A + K+S + V Y +G+ +H I+ L++KP N
Sbjct: 122 EMVLILEFLSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPEN- 179
Query: 179 ILNEADRAVLGDVXXXXXXXXXXXXSSDLPR-RLGTPNYMAPEQWQPEVRGPISFETDSW 237
I+ E +A V ++ + T + APE R P+ F TD W
Sbjct: 180 IMCETKKA--SSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVD---REPVGFYTDMW 234
Query: 238 GFACSIIEMLTGVQPRCGRSVDEIYDAVVR 267
+L+G+ P G E V R
Sbjct: 235 AIGVLGYVLLSGLSPFAGEDDLETLQNVKR 264
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 89/224 (39%), Gaps = 20/224 (8%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP--VKEDRMRVLLERLNDLFLKCQGV 105
++G G +GEV L ++ + E A+KI+ V LLE + LK
Sbjct: 44 KLGSGAYGEVLLCRDKVT------HVERAIKIIRKTSVSTSSNSKLLEEV--AVLKLLDH 95
Query: 106 EGICWLQGISVINGKICIIMKFYEGS--VGDRMAQLKGGKLSLSNVFRYAIDLAQGILQL 163
I L ++M+ Y+G + + ++K ++ + + + + G+ L
Sbjct: 96 PNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVL---SGVTYL 152
Query: 164 HSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQ 223
H I+ +LKP N +L ++ L + + RLGT Y+APE
Sbjct: 153 HKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK-MKERLGTAYYIAPEV-- 209
Query: 224 PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR 267
+R + D W + +L G P G++ EI V +
Sbjct: 210 --LRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEK 251
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 103/288 (35%), Gaps = 55/288 (19%)
Query: 38 IKPSALKLRHRIGRGPFGEV----WLATH----------YLSTEDCDEYHEVAVKILHPV 83
I PS L IG G FG V WL +S ED E EV +K+ HP
Sbjct: 5 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHP- 63
Query: 84 KEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK 143
+L L+ G+C Q IC++ +F E + + G
Sbjct: 64 ----------KLVQLY-------GVCLEQ------APICLVTEFMEHGCLSDYLRTQRGL 100
Query: 144 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 203
+ + +D+ +G+ L ++ +L N ++ E + D
Sbjct: 101 FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 160
Query: 204 SS---DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 259
SS P + +P + ++ S ++D W F + E+ + G P RS
Sbjct: 161 SSTGTKFPVKWASPEVFSFSRY--------SSKSDVWSFGVLMWEVFSEGKIPYENRSNS 212
Query: 260 EIYDAVVR--RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
E+ + + R P + S V ++ C+ RP + +LR
Sbjct: 213 EVVEDISTGFRLYKPRLAS---THVYQIMNHCWRERPEDRPAFSRLLR 257
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 58/157 (36%), Gaps = 27/157 (17%)
Query: 106 EGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK----LSLSNVFRYAIDLAQGIL 161
E I L + K+ ++ +F + + M G L L+ V + L QG+
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122
Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTP-NYMAPE 220
H IL +LKP N ++N+ + LGD L R G P N + E
Sbjct: 123 FCHENKILHRDLKPQNLLINKRGQLKLGDF--------------GLARAFGIPVNTFSSE 168
Query: 221 QWQPEVRGP--------ISFETDSWGFACSIIEMLTG 249
R P S D W C + EM+TG
Sbjct: 169 VVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITG 205
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 60/168 (35%), Gaps = 22/168 (13%)
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
Y + G+ LH + I+ +LKP N +L++ + D+ +
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA--- 350
Query: 212 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR--Q 269
GTP +MAPE E F D + ++ EM+ P R + +R +
Sbjct: 351 GTPGFMAPELLLGE---EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE 407
Query: 270 EIPPIPSGLPPAVENVLLGCFEYD--------------LRSRPLMTDI 303
+ P PA ++ + D LR+ PL DI
Sbjct: 408 QAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 60/168 (35%), Gaps = 22/168 (13%)
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
Y + G+ LH + I+ +LKP N +L++ + D+ +
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA--- 350
Query: 212 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR--Q 269
GTP +MAPE E F D + ++ EM+ P R + +R +
Sbjct: 351 GTPGFMAPELLLGE---EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE 407
Query: 270 EIPPIPSGLPPAVENVLLGCFEYD--------------LRSRPLMTDI 303
+ P PA ++ + D LR+ PL DI
Sbjct: 408 QAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 60/168 (35%), Gaps = 22/168 (13%)
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
Y + G+ LH + I+ +LKP N +L++ + D+ +
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA--- 350
Query: 212 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR--Q 269
GTP +MAPE E F D + ++ EM+ P R + +R +
Sbjct: 351 GTPGFMAPELLLGE---EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE 407
Query: 270 EIPPIPSGLPPAVENVLLGCFEYD--------------LRSRPLMTDI 303
+ P PA ++ + D LR+ PL DI
Sbjct: 408 QAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 5/131 (3%)
Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 189
G + D +AQ + LS + + G+ LH+K I +LKP N +L + + +
Sbjct: 100 GELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPH 157
Query: 190 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ GTP ++APE E P+ E D W +L+G
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 214
Query: 250 VQPRCGRSVDE 260
P G + E
Sbjct: 215 ASPFLGDTKQE 225
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 88/230 (38%), Gaps = 18/230 (7%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE-RLNDLFLK--CQGV 105
IG+G FG+V + D E VA+KI+ K + +E RL +L K +
Sbjct: 62 IGKGSFGQV------VKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMK 115
Query: 106 EGICWLQGISVINGKICIIMKFYEGSVGD--RMAQLKGGKLSLSNVFRYAIDLAQGILQL 163
I L+ + +C++ + ++ D R +G L+L+ F + A L
Sbjct: 116 YYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT 175
Query: 164 HSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQ 223
I+ +LKP N +L R + V + R Y +PE
Sbjct: 176 PELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQSRF----YRSPEVL- 230
Query: 224 PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP 273
+ P D W C ++EM TG G + + + +V IPP
Sbjct: 231 --LGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPP 278
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 60/168 (35%), Gaps = 22/168 (13%)
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
Y + G+ LH + I+ +LKP N +L++ + D+ +
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA--- 350
Query: 212 GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR--Q 269
GTP +MAPE E F D + ++ EM+ P R + +R +
Sbjct: 351 GTPGFMAPELLLGE---EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE 407
Query: 270 EIPPIPSGLPPAVENVLLGCFEYD--------------LRSRPLMTDI 303
+ P PA ++ + D LR+ PL DI
Sbjct: 408 QAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 5/131 (3%)
Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 189
G + D +AQ + LS + + G+ LH+K I +LKP N +L + + +
Sbjct: 100 GELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPH 157
Query: 190 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ GTP ++APE E P+ E D W +L+G
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 214
Query: 250 VQPRCGRSVDE 260
P G + E
Sbjct: 215 ASPFLGDTKQE 225
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 104/258 (40%), Gaps = 23/258 (8%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC 102
LKL IG+G FG+V L + ++VAVK +K D + +
Sbjct: 8 LKLLQTIGKGEFGDVMLGDY--------RGNKVAVKC---IKNDATAQAFLAEASVMTQL 56
Query: 103 QGVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGIL 161
+ + L I G + I+ ++ +GS+ D + L + ++++D+ + +
Sbjct: 57 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 116
Query: 162 QLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
L + +L N +++E + A + D + LP + P + ++
Sbjct: 117 YLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVKWTAPEALREKK 175
Query: 222 WQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP 280
+ S ++D W F + E+ + G P + ++ V + ++ P G PP
Sbjct: 176 F--------STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDA-PDGCPP 226
Query: 281 AVENVLLGCFEYDLRSRP 298
AV V+ C+ D RP
Sbjct: 227 AVYEVMKNCWHLDAAMRP 244
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/207 (18%), Positives = 81/207 (39%), Gaps = 15/207 (7%)
Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L+G+ + + I+ ++ E D + + ++ + +A G+ L
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 167 GILVLNLKPFNFILNEADRAVLGD-----VXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
G + +L N ++N + D V +P R +P +A +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 222 WQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP 280
+ + +D W + + E+++ G +P S ++ AV +PP P P
Sbjct: 227 F--------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPA 277
Query: 281 AVENVLLGCFEYDLRSRPLMTDILRVF 307
A+ ++L C++ D +RP I+ +
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/207 (18%), Positives = 81/207 (39%), Gaps = 15/207 (7%)
Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L+G+ + + I+ ++ E D + + ++ + +A G+ L
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 167 GILVLNLKPFNFILNEADRAVLGD-----VXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
G + +L N ++N + D V +P R +P +A +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 222 WQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP 280
+ + +D W + + E+++ G +P S ++ AV +PP P P
Sbjct: 227 F--------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPA 277
Query: 281 AVENVLLGCFEYDLRSRPLMTDILRVF 307
A+ ++L C++ D +RP I+ +
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 89/229 (38%), Gaps = 20/229 (8%)
Query: 45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQG 104
R +G G F EV LA ED VA+K + + +E + K +
Sbjct: 22 FRDVLGTGAFSEVILA------EDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKH 75
Query: 105 VEGICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQL 163
I L I G + +IM+ G + DR+ + G + + R + + L
Sbjct: 76 -PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVE--KGFYTERDASRLIFQVLDAVKYL 132
Query: 164 HSKGILVLNLKPFNFI---LNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPE 220
H GI+ +LKP N + L+E + ++ D S L GTP Y+APE
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDF----GLSKMEDPGSVLSTACGTPGYVAPE 188
Query: 221 QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ 269
+ P S D W +L G P + ++++ +++ +
Sbjct: 189 VL---AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAE 234
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/207 (18%), Positives = 81/207 (39%), Gaps = 15/207 (7%)
Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L+G+ + + I+ ++ E D + + ++ + +A G+ L
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 167 GILVLNLKPFNFILNEADRAVLGD-----VXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
G + +L N ++N + D V +P R +P +A +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 222 WQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP 280
+ + +D W + + E+++ G +P S ++ AV +PP P P
Sbjct: 227 F--------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPA 277
Query: 281 AVENVLLGCFEYDLRSRPLMTDILRVF 307
A+ ++L C++ D +RP I+ +
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 89/229 (38%), Gaps = 20/229 (8%)
Query: 45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQG 104
R +G G F EV LA ED VA+K + + +E + K +
Sbjct: 22 FRDVLGTGAFSEVILA------EDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKH 75
Query: 105 VEGICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQL 163
I L I G + +IM+ G + DR+ + G + + R + + L
Sbjct: 76 -PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVE--KGFYTERDASRLIFQVLDAVKYL 132
Query: 164 HSKGILVLNLKPFNFI---LNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPE 220
H GI+ +LKP N + L+E + ++ D S L GTP Y+APE
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDF----GLSKMEDPGSVLSTACGTPGYVAPE 188
Query: 221 QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ 269
+ P S D W +L G P + ++++ +++ +
Sbjct: 189 VL---AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAE 234
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 20/146 (13%)
Query: 41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFL 100
+ K+ +IG G F V+LAT L ++A+K L P +R+ E L
Sbjct: 21 NVFKIEDKIGEGTFSSVYLATAQLQV---GPEEKIALKHLIPTSHP-IRIAAE------L 70
Query: 101 KCQGVEG----ICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAID 155
+C V G + ++ N + I M + E S D + LS V Y ++
Sbjct: 71 QCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDIL-----NSLSFQEVREYMLN 125
Query: 156 LAQGILQLHSKGILVLNLKPFNFILN 181
L + + ++H GI+ ++KP NF+ N
Sbjct: 126 LFKALKRIHQFGIVHRDVKPSNFLYN 151
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/207 (18%), Positives = 81/207 (39%), Gaps = 15/207 (7%)
Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L+G+ + + I+ ++ E D + + ++ + +A G+ L
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 167 GILVLNLKPFNFILNEADRAVLGD-----VXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
G + +L N ++N + D V +P R +P +A +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 222 WQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP 280
+ + +D W + + E+++ G +P S ++ AV +PP P P
Sbjct: 227 F--------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPA 277
Query: 281 AVENVLLGCFEYDLRSRPLMTDILRVF 307
A+ ++L C++ D +RP I+ +
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/207 (18%), Positives = 81/207 (39%), Gaps = 15/207 (7%)
Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L+G+ + + I+ ++ E D + + ++ + +A G+ L
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 167 GILVLNLKPFNFILNEADRAVLGD-----VXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
G + +L N ++N + D V +P R +P +A +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 222 WQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP 280
+ + +D W + + E+++ G +P S ++ AV +PP P P
Sbjct: 227 F--------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPA 277
Query: 281 AVENVLLGCFEYDLRSRPLMTDILRVF 307
A+ ++L C++ D +RP I+ +
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 101/258 (39%), Gaps = 29/258 (11%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
R+GRG FGEV H + ED + AVK ++R+ + R +L + C G+
Sbjct: 81 RLGRGSFGEV----HRM--EDKQTGFQCAVK--------KVRLEVFRAEEL-MACAGLTS 125
Query: 108 --ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS 165
I L G + I M+ EG ++ + +G L Y +G+ LHS
Sbjct: 126 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGC-LPEDRALYYLGQALEGLEYLHS 184
Query: 166 KGILVLNLKPFNFIL-NEADRAVLGDVXXXXXXXXXXXXSSDLPRRL--GTPNYMAPEQW 222
+ IL ++K N +L ++ A L D L GT +MAPE
Sbjct: 185 RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEV- 243
Query: 223 QPEVRG-PISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA 281
V G + D W C ++ ML G P + + E PP+ +PP+
Sbjct: 244 ---VLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIA--SEPPPVRE-IPPS 297
Query: 282 VENVLLGCFEYDLRSRPL 299
+ + LR P+
Sbjct: 298 CAPLTAQAIQEGLRKEPI 315
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 5/131 (3%)
Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 189
G + D +AQ + LS + + G+ LH+K I +LKP N +L + + +
Sbjct: 100 GELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPH 157
Query: 190 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ GTP ++APE E P+ E D W +L+G
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 214
Query: 250 VQPRCGRSVDE 260
P G + E
Sbjct: 215 ASPFLGDTKQE 225
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 89/229 (38%), Gaps = 20/229 (8%)
Query: 45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQG 104
R +G G F EV LA ED VA+K + + +E + K +
Sbjct: 22 FRDVLGTGAFSEVILA------EDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKH 75
Query: 105 VEGICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQL 163
I L I G + +IM+ G + DR+ + G + + R + + L
Sbjct: 76 -PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVE--KGFYTERDASRLIFQVLDAVKYL 132
Query: 164 HSKGILVLNLKPFNFI---LNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPE 220
H GI+ +LKP N + L+E + ++ D S L GTP Y+APE
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDF----GLSKMEDPGSVLSTACGTPGYVAPE 188
Query: 221 QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ 269
+ P S D W +L G P + ++++ +++ +
Sbjct: 189 VL---AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAE 234
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/207 (18%), Positives = 81/207 (39%), Gaps = 15/207 (7%)
Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L+G+ + + I+ ++ E D + + ++ + +A G+ L
Sbjct: 105 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 164
Query: 167 GILVLNLKPFNFILNEADRAVLGD-----VXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
G + +L N ++N + D V +P R +P +A +
Sbjct: 165 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 224
Query: 222 WQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP 280
+ + +D W + + E+++ G +P S ++ AV +PP P P
Sbjct: 225 F--------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPA 275
Query: 281 AVENVLLGCFEYDLRSRPLMTDILRVF 307
A+ ++L C++ D +RP I+ +
Sbjct: 276 ALYQLMLDCWQKDRNNRPKFEQIVSIL 302
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 5/131 (3%)
Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 189
G + D +AQ + LS + + G+ LH+K I +LKP N +L + + +
Sbjct: 100 GELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPH 157
Query: 190 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ GTP ++APE E P+ E D W +L+G
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 214
Query: 250 VQPRCGRSVDE 260
P G + E
Sbjct: 215 ASPFLGDTKQE 225
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 63/159 (39%), Gaps = 14/159 (8%)
Query: 107 GICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS 165
I L I + +I++ G + D +A+ + L+ ++ + G+ LHS
Sbjct: 69 NIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDGVHYLHS 126
Query: 166 KGILVLNLKPFNFILNEAD----RAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
K I +LKP N +L + + R L D ++ GTP ++APE
Sbjct: 127 KRIAHFDLKPENIMLLDKNVPNPRIKLIDF----GIAHKIEAGNEFKNIFGTPEFVAPEI 182
Query: 222 WQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE 260
E P+ E D W +L+G P G + E
Sbjct: 183 VNYE---PLGLEADMWSIGVITYILLSGASPFLGETKQE 218
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 63/159 (39%), Gaps = 14/159 (8%)
Query: 107 GICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS 165
I L I + +I++ G + D +A+ + L+ ++ + G+ LHS
Sbjct: 76 NIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDGVHYLHS 133
Query: 166 KGILVLNLKPFNFILNEAD----RAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
K I +LKP N +L + + R L D ++ GTP ++APE
Sbjct: 134 KRIAHFDLKPENIMLLDKNVPNPRIKLIDF----GIAHKIEAGNEFKNIFGTPEFVAPEI 189
Query: 222 WQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE 260
E P+ E D W +L+G P G + E
Sbjct: 190 VNYE---PLGLEADMWSIGVITYILLSGASPFLGETKQE 225
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 94/244 (38%), Gaps = 48/244 (19%)
Query: 33 DTNAWIKPSALKLRHRIGRGPFGEVWL----------ATHYLSTEDCDEYHEVAVKILHP 82
D N + ++ IG+G FG+V + A Y++ + C E +EV +
Sbjct: 7 DENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVR----NV 62
Query: 83 VKEDRMRVLLER--LNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLK 140
KE ++ LE L +L+ Q E + + + ++ G GD L+
Sbjct: 63 FKELQIMQGLEHPFLVNLWYSFQDEEDMFMV--VDLLLG-------------GDLRYHLQ 107
Query: 141 GG-KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXX 199
V + +L + L ++ I+ ++KP N +L+E + D
Sbjct: 108 QNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNI------ 161
Query: 200 XXXXSSDLPRRL------GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPR 253
++ LPR GT YMAPE + SF D W + E+L G +P
Sbjct: 162 ----AAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY 217
Query: 254 CGRS 257
RS
Sbjct: 218 HIRS 221
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 78/187 (41%), Gaps = 15/187 (8%)
Query: 123 IIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN 181
IIM+ Y G +G + + K L + + Y++ + + + L S + ++ N ++
Sbjct: 85 IIMELYPYGELGHYLERNKNS-LKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVA 143
Query: 182 EADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQ-PEVRGPISFET--DSWG 238
+ LGD + + R P +W PE F T D W
Sbjct: 144 SPECVKLGDFGLSRYIEDEDYYKASVTR--------LPIKWMSPESINFRRFTTASDVWM 195
Query: 239 FACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 297
FA + E+L+ G QP ++ V+ + + P P PP + ++ C++YD R
Sbjct: 196 FAVCMWEILSFGKQPFFWLENKDVI-GVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDR 254
Query: 298 PLMTDIL 304
P T+++
Sbjct: 255 PRFTELV 261
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 78/187 (41%), Gaps = 15/187 (8%)
Query: 123 IIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN 181
IIM+ Y G +G + + K L + + Y++ + + + L S + ++ N ++
Sbjct: 89 IIMELYPYGELGHYLERNKNS-LKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVA 147
Query: 182 EADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQW-QPEVRGPISFET--DSWG 238
+ LGD + + R P +W PE F T D W
Sbjct: 148 SPECVKLGDFGLSRYIEDEDYYKASVTR--------LPIKWMSPESINFRRFTTASDVWM 199
Query: 239 FACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 297
FA + E+L+ G QP ++ V+ + + P P PP + ++ C++YD R
Sbjct: 200 FAVCMWEILSFGKQPFFWLENKDVI-GVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDR 258
Query: 298 PLMTDIL 304
P T+++
Sbjct: 259 PRFTELV 265
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 63/159 (39%), Gaps = 14/159 (8%)
Query: 107 GICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS 165
I L I + +I++ G + D +A+ + L+ ++ + G+ LHS
Sbjct: 90 NIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDGVHYLHS 147
Query: 166 KGILVLNLKPFNFILNEAD----RAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
K I +LKP N +L + + R L D ++ GTP ++APE
Sbjct: 148 KRIAHFDLKPENIMLLDKNVPNPRIKLIDF----GIAHKIEAGNEFKNIFGTPEFVAPEI 203
Query: 222 WQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE 260
E P+ E D W +L+G P G + E
Sbjct: 204 VNYE---PLGLEADMWSIGVITYILLSGASPFLGETKQE 239
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 78/187 (41%), Gaps = 15/187 (8%)
Query: 123 IIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN 181
IIM+ Y G +G + + K L + + Y++ + + + L S + ++ N ++
Sbjct: 101 IIMELYPYGELGHYLERNKNS-LKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVA 159
Query: 182 EADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQ-PEVRGPISFET--DSWG 238
+ LGD + + R P +W PE F T D W
Sbjct: 160 SPECVKLGDFGLSRYIEDEDYYKASVTR--------LPIKWMSPESINFRRFTTASDVWM 211
Query: 239 FACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 297
FA + E+L+ G QP ++ V+ + + P P PP + ++ C++YD R
Sbjct: 212 FAVCMWEILSFGKQPFFWLENKDVI-GVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDR 270
Query: 298 PLMTDIL 304
P T+++
Sbjct: 271 PRFTELV 277
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 73/153 (47%), Gaps = 16/153 (10%)
Query: 37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLN 96
W +L ++GRG + EV+ A + + E +V VKIL PVK+++++ ++ L
Sbjct: 33 WGNQDDYQLVRKLGRGKYSEVFEAINITNNE------KVVVKILKPVKKNKIKREIKILE 86
Query: 97 DLFLKCQGVEGICWLQGI--SVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAI 154
+L +G I L I ++ ++ + + ++ Q L+ ++ Y
Sbjct: 87 NL----RGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMY 138
Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAV 187
++ + + HS GI+ ++KP N +++ R +
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL 171
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 82/201 (40%), Gaps = 15/201 (7%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
+G G FG+V+ A ++ + A K++ E+ + + + ++ C I
Sbjct: 27 LGDGAFGKVYKA------KNKETGALAAAKVIETKSEEELEDYIVEI-EILATCDH-PYI 78
Query: 109 CWLQGISVINGKICIIMKFYEGSVGDR-MAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG 167
L G +GK+ I+++F G D M +L G L+ + + + + LHSK
Sbjct: 79 VKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG-LTEPQIQVVCRQMLEALNFLHSKR 137
Query: 168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVR 227
I+ +LK N ++ L D +GTP +MAPE E
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF---IGTPYWMAPEVVMCETM 194
Query: 228 --GPISFETDSWGFACSIIEM 246
P ++ D W ++IEM
Sbjct: 195 KDTPYDYKADIWSLGITLIEM 215
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/295 (18%), Positives = 113/295 (38%), Gaps = 31/295 (10%)
Query: 25 RTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK 84
R + T ++ + + + + +G G FGEV L ++ + VA+K L
Sbjct: 17 RGSTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK---KEISVAIKTLKVGY 73
Query: 85 EDRMRVLLERLNDLFLKCQGVEG------ICWLQGISVINGKICIIMKFYEGSVGDRMAQ 138
++ R FL + G I L+G+ + + I+ ++ E D +
Sbjct: 74 TEKQR-------RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR 126
Query: 139 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD-----VXX 193
+ ++ + +A G+ L G + +L N ++N + D V
Sbjct: 127 KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 186
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQP 252
+P R +P +A ++ + +D W + + E+++ G +P
Sbjct: 187 DDPEAAYTTRGGKIPIRWTSPEAIAYRKF--------TSASDVWSYGIVLWEVMSYGERP 238
Query: 253 RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
S ++ AV +PP P P A+ ++L C++ D +RP I+ +
Sbjct: 239 YWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 292
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 15/202 (7%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
+G G FG+V+ A ++ + A K++ E+ + + + ++ C
Sbjct: 18 ELGDGAFGKVYKA------KNKETGALAAAKVIETKSEEELEDYIVEI-EILATCDH-PY 69
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDR-MAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G +GK+ I+++F G D M +L G L+ + + + + LHSK
Sbjct: 70 IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG-LTEPQIQVVCRQMLEALNFLHSK 128
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
I+ +LK N ++ L D +GTP +MAPE E
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF---IGTPYWMAPEVVMCET 185
Query: 227 R--GPISFETDSWGFACSIIEM 246
P ++ D W ++IEM
Sbjct: 186 MKDTPYDYKADIWSLGITLIEM 207
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 104/288 (36%), Gaps = 55/288 (19%)
Query: 38 IKPSALKLRHRIGRGPFGEV----WLATH----------YLSTEDCDEYHEVAVKILHPV 83
I PS L IG G FG V WL +S +D E EV +K+ HP
Sbjct: 24 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHP- 82
Query: 84 KEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK 143
+L L+ G+C Q IC++ +F E + + G
Sbjct: 83 ----------KLVQLY-------GVCLEQ------APICLVFEFMEHGCLSDYLRTQRGL 119
Query: 144 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 203
+ + +D+ +G+ L ++ +L N ++ E + D
Sbjct: 120 FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 179
Query: 204 SS---DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 259
SS P + +P + ++ S ++D W F + E+ + G P RS
Sbjct: 180 SSTGTKFPVKWASPEVFSFSRY--------SSKSDVWSFGVLMWEVFSEGKIPYENRSNS 231
Query: 260 EIYDAVVR--RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 305
E+ + + R P + S V ++ C++ RP + +LR
Sbjct: 232 EVVEDISTGFRLYKPRLAS---THVYQIMNHCWKERPEDRPAFSRLLR 276
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 5/131 (3%)
Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 189
G + D +AQ + LS + + G+ LH+K I +LKP N +L + + +
Sbjct: 100 GELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPH 157
Query: 190 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ GTP ++APE E P+ E D W +L+G
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 214
Query: 250 VQPRCGRSVDE 260
P G + E
Sbjct: 215 ASPFLGDTKQE 225
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/207 (18%), Positives = 81/207 (39%), Gaps = 15/207 (7%)
Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L+G+ + + I+ ++ E D + + ++ + +A G+ L
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 137
Query: 167 GILVLNLKPFNFILNEADRAVLGD-----VXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
G + +L N ++N + D V +P R +P +A +
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 197
Query: 222 WQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP 280
+ + +D W + + E+++ G +P S ++ AV +PP P P
Sbjct: 198 F--------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPA 248
Query: 281 AVENVLLGCFEYDLRSRPLMTDILRVF 307
A+ ++L C++ D +RP I+ +
Sbjct: 249 ALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 70/162 (43%), Gaps = 5/162 (3%)
Query: 144 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 203
+++ ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 196 ITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDY 255
Query: 204 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY 262
RL +MAPE ++ S ++D W + + E+ + G P G +DE +
Sbjct: 256 VRKGDTRLPL-KWMAPESIFDKI---YSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDF 311
Query: 263 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
+ +R P P + ++L C+ D + RP +++
Sbjct: 312 CSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELV 353
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 111/309 (35%), Gaps = 40/309 (12%)
Query: 33 DTNAWIKPSALKLRHR-------------IGRGPFGEVWLATHYLSTEDCDEYHEVAVKI 79
+ +I P+ L H+ +G G FG+V AT Y + D VAVK+
Sbjct: 2 NNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKS-DAAMTVAVKM 60
Query: 80 LHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL 139
L P R L + I L G I G +I ++ GD + L
Sbjct: 61 LKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEY--CCYGDLLNFL 118
Query: 140 KGGKLSL-------------------SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL 180
+ + S ++ ++ +A+G+ L SK + +L N +L
Sbjct: 119 RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL 178
Query: 181 NEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFA 240
+ D RL +MAPE V +FE+D W +
Sbjct: 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPV-KWMAPESIFNCV---YTFESDVWSYG 234
Query: 241 CSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPL 299
+ E+ + G P G VD + +++ P P + +++ C++ D RP
Sbjct: 235 IFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPT 294
Query: 300 MTDILRVFK 308
I+++ +
Sbjct: 295 FKQIVQLIE 303
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 85/209 (40%), Gaps = 22/209 (10%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVL--LERLNDLFLKCQGV- 105
IG G FG+V+ A H + D Y VK + E ++ L L+ +N + G
Sbjct: 19 IGSGGFGQVFKAKHRI---DGKTYVIKRVKYNNEKAEREVKALAKLDHVN--IVHYNGCW 73
Query: 106 EGICWLQGISVINGK------ICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQ 158
+G + S N + I M+F + G++ + + +G KL + +
Sbjct: 74 DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITK 133
Query: 159 GILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMA 218
G+ +HSK ++ +LKP N L + + +GD R GT YM+
Sbjct: 134 GVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDF----GLVTSLKNDGKRXRSKGTLRYMS 189
Query: 219 PEQWQPEVRGPISFETDSWGFACSIIEML 247
PEQ + G E D + + E+L
Sbjct: 190 PEQISSQDYGK---EVDLYALGLILAELL 215
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 86/199 (43%), Gaps = 21/199 (10%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP--VKEDRMRVLLERLNDLFLKCQGVE 106
+G G FG+V LA H + + +VA+KI++ + + M+ +ER +L+
Sbjct: 22 LGEGSFGKVKLAYHTTTGQ------KVALKIINKKVLAKSDMQGRIER-EISYLRLLRHP 74
Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L + +I +++++ + D + Q K+S R+ + + H
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRH 132
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
I+ +LKP N +L+E + D + L G+PNY APE ++
Sbjct: 133 KIVHRDLKPENLLLDEHLNVKIADF----GLSNIMTDGNFLKTSCGSPNYAAPEVISGKL 188
Query: 227 R-GPISFETDSWGFACSII 244
GP E D W +C +I
Sbjct: 189 YAGP---EVDVW--SCGVI 202
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 111/309 (35%), Gaps = 40/309 (12%)
Query: 33 DTNAWIKPSALKLRHR-------------IGRGPFGEVWLATHYLSTEDCDEYHEVAVKI 79
+ +I P+ L H+ +G G FG+V AT Y + D VAVK+
Sbjct: 25 NNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKS-DAAMTVAVKM 83
Query: 80 LHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL 139
L P R L + I L G I G +I ++ GD + L
Sbjct: 84 LKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEY--CCYGDLLNFL 141
Query: 140 KGGKLSL-------------------SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL 180
+ + S ++ ++ +A+G+ L SK + +L N +L
Sbjct: 142 RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL 201
Query: 181 NEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFA 240
+ D RL +MAPE V +FE+D W +
Sbjct: 202 THGRITKICDFGLARHIKNDSNYVVKGNARLPV-KWMAPESIFNCV---YTFESDVWSYG 257
Query: 241 CSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPL 299
+ E+ + G P G VD + +++ P P + +++ C++ D RP
Sbjct: 258 IFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPT 317
Query: 300 MTDILRVFK 308
I+++ +
Sbjct: 318 FKQIVQLIE 326
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 86/199 (43%), Gaps = 21/199 (10%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP--VKEDRMRVLLERLNDLFLKCQGVE 106
+G G FG+V LA H + + +VA+KI++ + + M+ +ER +L+
Sbjct: 21 LGEGSFGKVKLAYHTTTGQ------KVALKIINKKVLAKSDMQGRIER-EISYLRLLRHP 73
Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L + +I +++++ + D + Q K+S R+ + + H
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRH 131
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
I+ +LKP N +L+E + D + L G+PNY APE ++
Sbjct: 132 KIVHRDLKPENLLLDEHLNVKIADF----GLSNIMTDGNFLKTSCGSPNYAAPEVISGKL 187
Query: 227 R-GPISFETDSWGFACSII 244
GP E D W +C +I
Sbjct: 188 YAGP---EVDVW--SCGVI 201
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 91/220 (41%), Gaps = 19/220 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP--VKEDRMRVLLERLNDLFLKCQGVE 106
+G G FG+V LA H + + +VA+KI++ + + M+ +ER +L+
Sbjct: 16 LGEGSFGKVKLAYHTTTGQ------KVALKIINKKVLAKSDMQGRIER-EISYLRLLRHP 68
Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L + +I +++++ + D + Q K+S R+ + + H
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRH 126
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
I+ +LKP N +L+E + D + L G+PNY APE ++
Sbjct: 127 KIVHRDLKPENLLLDEHLNVKIADF----GLSNIMTDGNFLKTSCGSPNYAAPEVISGKL 182
Query: 227 R-GPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV 265
GP E D W + ML P S+ ++ +
Sbjct: 183 YAGP---EVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI 219
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 91/220 (41%), Gaps = 19/220 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP--VKEDRMRVLLERLNDLFLKCQGVE 106
+G G FG+V LA H + + +VA+KI++ + + M+ +ER +L+
Sbjct: 12 LGEGSFGKVKLAYHTTTGQ------KVALKIINKKVLAKSDMQGRIER-EISYLRLLRHP 64
Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L + +I +++++ + D + Q K+S R+ + + H
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRH 122
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
I+ +LKP N +L+E + D + L G+PNY APE ++
Sbjct: 123 KIVHRDLKPENLLLDEHLNVKIADF----GLSNIMTDGNFLKTSCGSPNYAAPEVISGKL 178
Query: 227 R-GPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV 265
GP E D W + ML P S+ ++ +
Sbjct: 179 YAGP---EVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI 215
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 116/318 (36%), Gaps = 42/318 (13%)
Query: 33 DTNAWIKPSALKLRHR-------------IGRGPFGEVWLATHYLSTEDCDEYHEVAVKI 79
+ +I P+ L H+ +G G FG+V AT Y + D VAVK+
Sbjct: 25 NNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKS-DAAMTVAVKM 83
Query: 80 LHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL 139
L P R L + I L G I G +I ++ GD + L
Sbjct: 84 LKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEY--CCYGDLLNFL 141
Query: 140 KGGKLSL-------------------SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL 180
+ + S ++ ++ +A+G+ L SK + +L N +L
Sbjct: 142 RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL 201
Query: 181 NEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFA 240
+ D RL +MAPE V +FE+D W +
Sbjct: 202 THGRITKICDFGLARDIKNDSNYVVKGNARLPV-KWMAPESIFNCV---YTFESDVWSYG 257
Query: 241 CSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPL 299
+ E+ + G P G VD + +++ P P + +++ C++ D RP
Sbjct: 258 IFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPT 317
Query: 300 MTDILRVFKS--SQNSVH 315
I+++ + S+++ H
Sbjct: 318 FKQIVQLIEKQISESTNH 335
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 55/143 (38%), Gaps = 5/143 (3%)
Query: 118 NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFN 177
+ ++ +I +F G + K+S Y + +G+ +H + L+LKP N
Sbjct: 226 DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPEN 285
Query: 178 FILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSW 237
+ L + S + GT + APE + + P+ + TD W
Sbjct: 286 IMFTTKRSNELKLIDFGLTAHLDPKQSVKV--TTGTAEFAAPEVAEGK---PVGYYTDMW 340
Query: 238 GFACSIIEMLTGVQPRCGRSVDE 260
+L+G+ P G + DE
Sbjct: 341 SVGVLSYILLSGLSPFGGENDDE 363
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 55/143 (38%), Gaps = 5/143 (3%)
Query: 118 NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFN 177
+ ++ +I +F G + K+S Y + +G+ +H + L+LKP N
Sbjct: 120 DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPEN 179
Query: 178 FILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSW 237
+ L + S + GT + APE + + P+ + TD W
Sbjct: 180 IMFTTKRSNELKLIDFGLTAHLDPKQSVKV--TTGTAEFAAPEVAEGK---PVGYYTDMW 234
Query: 238 GFACSIIEMLTGVQPRCGRSVDE 260
+L+G+ P G + DE
Sbjct: 235 SVGVLSYILLSGLSPFGGENDDE 257
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 104/284 (36%), Gaps = 35/284 (12%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYL--STEDCDEYHEVAVKILHPVKEDRMRVLLERL 95
I S +K+ IG G FGEV + E C VA+K L D+ R
Sbjct: 26 IDASCIKIEKVIGVGEFGEVCSGRLKVPGKREIC-----VAIKTLKAGYTDKQR------ 74
Query: 96 NDLFLKCQGVEG------ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNV 149
FL + G I L+G+ + II ++ E D + G+ ++ +
Sbjct: 75 -RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL 133
Query: 150 FRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD-----VXXXXXXXXXXXXS 204
+ G+ L + +L N ++N + D V
Sbjct: 134 VGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG 193
Query: 205 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYD 263
+P R P +A ++ + +D W + + E+++ G +P S ++
Sbjct: 194 GKIPIRWTAPEAIAYRKF--------TSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIK 245
Query: 264 AVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
A+ +PP P P A+ ++L C++ + RP I+ +
Sbjct: 246 AIEEGYRLPP-PMDCPIALHQLMLDCWQKERSDRPKFGQIVNML 288
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 104/284 (36%), Gaps = 35/284 (12%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYL--STEDCDEYHEVAVKILHPVKEDRMRVLLERL 95
I S +K+ IG G FGEV + E C VA+K L D+ R
Sbjct: 5 IDASCIKIEKVIGVGEFGEVCSGRLKVPGKREIC-----VAIKTLKAGYTDKQR------ 53
Query: 96 NDLFLKCQGVEG------ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNV 149
FL + G I L+G+ + II ++ E D + G+ ++ +
Sbjct: 54 -RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL 112
Query: 150 FRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD-----VXXXXXXXXXXXXS 204
+ G+ L + +L N ++N + D V
Sbjct: 113 VGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG 172
Query: 205 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYD 263
+P R P +A ++ + +D W + + E+++ G +P S ++
Sbjct: 173 GKIPIRWTAPEAIAYRKF--------TSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIK 224
Query: 264 AVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
A+ +PP P P A+ ++L C++ + RP I+ +
Sbjct: 225 AIEEGYRLPP-PMDCPIALHQLMLDCWQKERSDRPKFGQIVNML 267
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 54/283 (19%), Positives = 108/283 (38%), Gaps = 33/283 (11%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRV-LLERLN 96
I+ S + + IG G FGEV C ++ K PV ++V E+
Sbjct: 19 IEASCITIERVIGAGEFGEV-----------CSGRLKLPGKRELPVAIKTLKVGYTEKQR 67
Query: 97 DLFLKCQGVEG------ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVF 150
FL + G I L+G+ + + I+ ++ E D + G+ ++ +
Sbjct: 68 RDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLV 127
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD-----VXXXXXXXXXXXXSS 205
++ G+ L G + +L N ++N + D V
Sbjct: 128 GMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 187
Query: 206 DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDA 264
+P R P +A ++ + +D W + + E+++ G +P + ++ A
Sbjct: 188 KIPIRWTAPEAIAFRKF--------TSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKA 239
Query: 265 VVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
V +P P P A+ ++L C++ + SRP +I+ +
Sbjct: 240 VEEGYRLPS-PMDCPAALYQLMLDCWQKERNSRPKFDEIVNML 281
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 104/286 (36%), Gaps = 27/286 (9%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKC 102
L +G G FG+V AT Y + D VAVK+L P R L +
Sbjct: 41 LSFGKTLGAGAFGKVVEATAYGLIKS-DAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 99
Query: 103 QGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSL---------------- 146
I L G I G +I ++ GD + L+ + S
Sbjct: 100 GNHMNIVNLLGACTIGGPTLVITEY--CCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 157
Query: 147 ---SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 203
++ ++ +A+G+ L SK + +L N +L + D
Sbjct: 158 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 217
Query: 204 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY 262
RL +MAPE V +FE+D W + + E+ + G P G VD +
Sbjct: 218 VVKGNARLPV-KWMAPESIFNCV---YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF 273
Query: 263 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
+++ P P + +++ C++ D RP I+++ +
Sbjct: 274 YKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 319
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 100/248 (40%), Gaps = 38/248 (15%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDE---YHEVAVKILHPVKEDRMRVL--- 91
I S K+R ++G G +GEV L C E + E A+K++ + D+ R
Sbjct: 34 IGESYFKVR-KLGSGAYGEVLL---------CKEKNGHSEKAIKVIKKSQFDKGRYSDDN 83
Query: 92 --LERLND------LFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL---- 139
+E+ ++ LK I L + ++ +FYEG G+ Q+
Sbjct: 84 KNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEG--GELFEQIINRH 141
Query: 140 KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXX 199
K + +N+ + + GI LH I+ ++KP N +L E ++L
Sbjct: 142 KFDECDAANIMK---QILSGICYLHKHNIVHRDIKPENILL-ENKNSLLNIKIVDFGLSS 197
Query: 200 XXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD 259
L RLGT Y+APE ++ + + D W + +L G P G++
Sbjct: 198 FFSKDYKLRDRLGTAYYIAPEV----LKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ 253
Query: 260 EIYDAVVR 267
+I V +
Sbjct: 254 DIIKKVEK 261
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 111/309 (35%), Gaps = 40/309 (12%)
Query: 33 DTNAWIKPSALKLRHR-------------IGRGPFGEVWLATHYLSTEDCDEYHEVAVKI 79
+ +I P+ L H+ +G G FG+V AT Y + D VAVK+
Sbjct: 20 NNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKS-DAAMTVAVKM 78
Query: 80 LHPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL 139
L P R L + I L G I G +I ++ GD + L
Sbjct: 79 LKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEY--CCYGDLLNFL 136
Query: 140 KGGKLSL-------------------SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL 180
+ + S ++ ++ +A+G+ L SK + +L N +L
Sbjct: 137 RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL 196
Query: 181 NEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFA 240
+ D RL +MAPE V +FE+D W +
Sbjct: 197 THGRITKICDFGLARDIKNDSNYVVKGNARLPV-KWMAPESIFNCV---YTFESDVWSYG 252
Query: 241 CSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPL 299
+ E+ + G P G VD + +++ P P + +++ C++ D RP
Sbjct: 253 IFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPT 312
Query: 300 MTDILRVFK 308
I+++ +
Sbjct: 313 FKQIVQLIE 321
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 104/284 (36%), Gaps = 35/284 (12%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYL--STEDCDEYHEVAVKILHPVKEDRMRVLLERL 95
I S +K+ IG G FGEV + E C VA+K L D+ R
Sbjct: 11 IDASCIKIEKVIGVGEFGEVCSGRLKVPGKREIC-----VAIKTLKAGYTDKQR------ 59
Query: 96 NDLFLKCQGVEG------ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNV 149
FL + G I L+G+ + II ++ E D + G+ ++ +
Sbjct: 60 -RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL 118
Query: 150 FRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD-----VXXXXXXXXXXXXS 204
+ G+ L + +L N ++N + D V
Sbjct: 119 VGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG 178
Query: 205 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYD 263
+P R P +A ++ + +D W + + E+++ G +P S ++
Sbjct: 179 GKIPIRWTAPEAIAYRKF--------TSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIK 230
Query: 264 AVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
A+ +PP P P A+ ++L C++ + RP I+ +
Sbjct: 231 AIEEGYRLPP-PMDCPIALHQLMLDCWQKERSDRPKFGQIVNML 273
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 99/272 (36%), Gaps = 43/272 (15%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP------------VKEDRMRVLLERLN 96
IG G FG V+ A ++E VA+K + +KE R L N
Sbjct: 23 IGHGSFGAVYFARDVRNSE------VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 97 DL-FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAID 155
+ + C E WL +M++ GS D + ++ L +
Sbjct: 77 TIQYRGCYLREHTAWL------------VMEYCLGSASD-LLEVHKKPLQEVEIAAVTHG 123
Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN 215
QG+ LHS ++ ++K N +L+E LGD +GTP
Sbjct: 124 ALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF-------VGTPY 176
Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVRRQEIPPI 274
+MAPE G + D W + IE+ P ++ +Y + + E P +
Sbjct: 177 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH--IAQNESPAL 234
Query: 275 PSG-LPPAVENVLLGCFEYDLRSRPLMTDILR 305
SG N + C + + RP +L+
Sbjct: 235 QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 266
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 99/272 (36%), Gaps = 43/272 (15%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP------------VKEDRMRVLLERLN 96
IG G FG V+ A ++E VA+K + +KE R L N
Sbjct: 62 IGHGSFGAVYFARDVRNSE------VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 97 DL-FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAID 155
+ + C E WL +M++ GS D + ++ L +
Sbjct: 116 TIQYRGCYLREHTAWL------------VMEYCLGSASD-LLEVHKKPLQEVEIAAVTHG 162
Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN 215
QG+ LHS ++ ++K N +L+E LGD +GTP
Sbjct: 163 ALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF-------VGTPY 215
Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVRRQEIPPI 274
+MAPE G + D W + IE+ P ++ +Y + + E P +
Sbjct: 216 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH--IAQNESPAL 273
Query: 275 PSG-LPPAVENVLLGCFEYDLRSRPLMTDILR 305
SG N + C + + RP +L+
Sbjct: 274 QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 305
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 44 KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE-RLNDLFLKC 102
K+ RIG G FG ++ T+ L+ + +VA+K P + D ++ E R L C
Sbjct: 12 KVGRRIGEGSFGVIFEGTNLLNNQ------QVAIK-FEPRRSDAPQLRDEYRTYKLLAGC 64
Query: 103 QGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQ 162
G+ + + + N + ++ G + + L G K S+ V A + +
Sbjct: 65 TGIPNVYYFGQEGLHNVLVIDLL----GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQS 120
Query: 163 LHSKGILVLNLKPFNFIL 180
+H K ++ ++KP NF++
Sbjct: 121 IHEKSLVYRDIKPDNFLI 138
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 44 KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE-RLNDLFLKC 102
K+ RIG G FG ++ T+ L+ + +VA+K P + D ++ E R L C
Sbjct: 13 KVGRRIGEGSFGVIFEGTNLLNNQ------QVAIK-FEPRRSDAPQLRDEYRTYKLLAGC 65
Query: 103 QGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQ 162
G+ + + + N + ++ G + + L G K S+ V A + +
Sbjct: 66 TGIPNVYYFGQEGLHNVLVIDLL----GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQS 121
Query: 163 LHSKGILVLNLKPFNFIL 180
+H K ++ ++KP NF++
Sbjct: 122 IHEKSLVYRDIKPDNFLI 139
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 98/257 (38%), Gaps = 17/257 (6%)
Query: 22 DHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL- 80
DHL + I K + +G+G FGEV L ++ ++C AVK++
Sbjct: 30 DHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQEC------AVKVIS 83
Query: 81 -HPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQ 138
VK+ + L R L LK I L G ++ + Y G + D +
Sbjct: 84 KRQVKQKTDKESLLREVQL-LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS 142
Query: 139 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 198
K + S + R + GI +H I+ +LKP N +L + +
Sbjct: 143 RK--RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRI-IDFGLS 199
Query: 199 XXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV 258
S + ++GT Y+APE + G + D W + +L+G P G +
Sbjct: 200 THFEASKKMKDKIGTAYYIAPEV----LHGTYDEKCDVWSTGVILYILLSGCPPFNGANE 255
Query: 259 DEIYDAVVRRQEIPPIP 275
+I V + + +P
Sbjct: 256 YDILKKVEKGKYTFELP 272
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 87/221 (39%), Gaps = 18/221 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
+G+G FG V+LA S +A+K+L + ++ V + ++ ++
Sbjct: 20 LGKGKFGNVYLARERQSK------FILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G ++ +I+++ G+V + +L + Y +LA + HSK
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SRFDEQRTATYITELANALSYCHSK 131
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ ++KP N +L G++ SS GT +Y+ PE + +
Sbjct: 132 RVIHRDIKPENLLLGSN-----GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM 186
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR 267
+ D W E L G+ P + E Y + R
Sbjct: 187 HDE---KVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISR 224
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 98/257 (38%), Gaps = 17/257 (6%)
Query: 22 DHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL- 80
DHL + I K + +G+G FGEV L ++ ++C AVK++
Sbjct: 31 DHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQEC------AVKVIS 84
Query: 81 -HPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQ 138
VK+ + L R L LK I L G ++ + Y G + D +
Sbjct: 85 KRQVKQKTDKESLLREVQL-LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS 143
Query: 139 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 198
K + S + R + GI +H I+ +LKP N +L + +
Sbjct: 144 RK--RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRI-IDFGLS 200
Query: 199 XXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV 258
S + ++GT Y+APE + G + D W + +L+G P G +
Sbjct: 201 THFEASKKMKDKIGTAYYIAPEV----LHGTYDEKCDVWSTGVILYILLSGCPPFNGANE 256
Query: 259 DEIYDAVVRRQEIPPIP 275
+I V + + +P
Sbjct: 257 YDILKKVEKGKYTFELP 273
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 87/221 (39%), Gaps = 18/221 (8%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVE-G 107
+G+G FG V+LA S +A+K+L + ++ V + ++ ++
Sbjct: 20 LGKGKFGNVYLARERQSK------FILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 108 ICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L G ++ +I+++ G+V + +L + Y +LA + HSK
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SRFDEQRTATYITELANALSYCHSK 131
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV 226
++ ++KP N +L G++ SS GT +Y+ PE + +
Sbjct: 132 RVIHRDIKPENLLLGSN-----GELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRM 186
Query: 227 RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR 267
+ D W E L G+ P + E Y + R
Sbjct: 187 HDE---KVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISR 224
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 59/157 (37%), Gaps = 20/157 (12%)
Query: 124 IMKFYEGSVGDR-----MAQLKGGKLSLSNVFRY-------AIDLAQ---GILQLHSKGI 168
IMK YE R M +GG+L + R A+ + Q G LH I
Sbjct: 83 IMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNI 142
Query: 169 LVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRG 228
+ +LKP N +L R L + + RLGT Y+APE +R
Sbjct: 143 VHRDLKPENLLLESKSRDALIKI-VDFGLSAHFEVGGKMKERLGTAYYIAPEV----LRK 197
Query: 229 PISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV 265
+ D W + +L G P G++ EI V
Sbjct: 198 KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 234
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 8/128 (6%)
Query: 121 ICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI 179
+ I M+F + G++ + + +G KL + +G+ +HSK ++ +LKP N
Sbjct: 109 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIF 168
Query: 180 LNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGF 239
L + + +GD + R GT YM+PEQ + G E D +
Sbjct: 169 LVDTKQVKIGDFGLVTSLKNDGKRT----RSKGTLRYMSPEQISSQDYGK---EVDLYAL 221
Query: 240 ACSIIEML 247
+ E+L
Sbjct: 222 GLILAELL 229
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 12/147 (8%)
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVF-RYAIDLAQGILQLHSK 166
I G +G+I I M+ +G D++ LK K + + +I + +G+ L K
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQV--LKEAKRIPEEILGKVSIAVLRGLAYLREK 133
Query: 167 -GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPE 225
I+ ++KP N ++N L D S +GT +YMAPE+ Q
Sbjct: 134 HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF-----VGTRSYMAPERLQ-- 186
Query: 226 VRGPISFETDSWGFACSIIEMLTGVQP 252
S ++D W S++E+ G P
Sbjct: 187 -GTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 5/162 (3%)
Query: 144 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 203
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 247
Query: 204 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY 262
RL +MAPE V + ++D W F + E+ + G P G +DE +
Sbjct: 248 VRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 303
Query: 263 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
++ P P + +L C+ + RP ++++
Sbjct: 304 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 345
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/207 (18%), Positives = 80/207 (38%), Gaps = 15/207 (7%)
Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L+G+ + + I+ + E D + + ++ + +A G+ L
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 167 GILVLNLKPFNFILNEADRAVLGD-----VXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
G + +L N ++N + D V +P R +P +A +
Sbjct: 167 GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 222 WQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP 280
+ + +D W + + E+++ G +P S ++ AV +PP P P
Sbjct: 227 F--------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPA 277
Query: 281 AVENVLLGCFEYDLRSRPLMTDILRVF 307
A+ ++L C++ D +RP I+ +
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 91/230 (39%), Gaps = 17/230 (7%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL--HPVKEDRMRVLLERLNDLFLKCQGVE 106
+G+G FGEV L ++ ++C AVK++ VK+ + L R L LK
Sbjct: 40 LGKGSFGEVILCKDKITGQEC------AVKVISKRQVKQKTDKESLLREVQL-LKQLDHP 92
Query: 107 GICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS 165
I L G ++ + Y G + D + K + S + R + GI +H
Sbjct: 93 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHK 150
Query: 166 KGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPE 225
I+ +LKP N +L + + S + ++GT Y+APE
Sbjct: 151 NKIVHRDLKPENLLLESKSKDANIRI-IDFGLSTHFEASKKMKDKIGTAYYIAPEV---- 205
Query: 226 VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 275
+ G + D W + +L+G P G + +I V + + +P
Sbjct: 206 LHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELP 255
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 6/132 (4%)
Query: 123 IIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN 181
I+++ EG + D++ K K + ++ Y + LA + LH GI+ +LKP N +L+
Sbjct: 97 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLS 154
Query: 182 EADRAVLGDVXXXXXXXXXXXXSSDLPRRL-GTPNYMAPEQWQPEVRGPISFETDSWGFA 240
+ L + + L R L GTP Y+APE + D W
Sbjct: 155 SQEEDCL--IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLG 212
Query: 241 CSIIEMLTGVQP 252
+ L+G P
Sbjct: 213 VILFICLSGYPP 224
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 10/137 (7%)
Query: 44 KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
+L +IG G FG+++L T + E EVA+K L VK ++ +E + ++ Q
Sbjct: 10 RLGRKIGSGSFGDIYLGTDIAAGE------EVAIK-LECVKTKHPQLHIE--SKIYKMMQ 60
Query: 104 GVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQL 163
G GI ++ ++M+ S+ D + K SL V A + I +
Sbjct: 61 GGVGIPTIRWCGAEGDYNVMVMELLGPSLED-LFNFCSRKFSLKTVLLLADQMISRIEYI 119
Query: 164 HSKGILVLNLKPFNFIL 180
HSK + ++KP NF++
Sbjct: 120 HSKNFIHRDVKPDNFLM 136
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/207 (18%), Positives = 80/207 (38%), Gaps = 15/207 (7%)
Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L+G+ + + I+ + E D + + ++ + +A G+ L
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 167 GILVLNLKPFNFILNEADRAVLGD-----VXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
G + +L N ++N + D V +P R +P +A +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 222 WQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP 280
+ + +D W + + E+++ G +P S ++ AV +PP P P
Sbjct: 227 F--------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPA 277
Query: 281 AVENVLLGCFEYDLRSRPLMTDILRVF 307
A+ ++L C++ D +RP I+ +
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 5/162 (3%)
Query: 144 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 203
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249
Query: 204 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY 262
RL +MAPE V + ++D W F + E+ + G P G +DE +
Sbjct: 250 VRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 305
Query: 263 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
++ P P + +L C+ + RP ++++
Sbjct: 306 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 347
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 5/162 (3%)
Query: 144 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 203
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 256
Query: 204 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY 262
RL +MAPE V + ++D W F + E+ + G P G +DE +
Sbjct: 257 VRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 312
Query: 263 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
++ P P + +L C+ + RP ++++
Sbjct: 313 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 354
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 10/137 (7%)
Query: 44 KLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQ 103
+L +IG G FG+++L T + E EVA+K L VK ++ +E + ++ Q
Sbjct: 12 RLGRKIGSGSFGDIYLGTDIAAGE------EVAIK-LECVKTKHPQLHIE--SKIYKMMQ 62
Query: 104 GVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQL 163
G GI ++ ++M+ S+ D + K SL V A + I +
Sbjct: 63 GGVGIPTIRWCGAEGDYNVMVMELLGPSLED-LFNFCSRKFSLKTVLLLADQMISRIEYI 121
Query: 164 HSKGILVLNLKPFNFIL 180
HSK + ++KP NF++
Sbjct: 122 HSKNFIHRDVKPDNFLM 138
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 115/283 (40%), Gaps = 31/283 (10%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL-FLK 101
+ + +G+G FG V+ +D E VA+K ++ R R+ E LN+ +K
Sbjct: 21 ITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERI--EFLNEASVMK 77
Query: 102 CQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-----------GKLSLSNVF 150
+ L G+ +IM+ + GD + L+ SLS +
Sbjct: 78 EFNCHHVVRLLGVVSQGQPTLVIMELM--TRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 135
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
+ A ++A G+ L++ + +L N ++ E +GD +D R+
Sbjct: 136 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIX-----ETDXXRK 190
Query: 211 LGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAV 265
G +M+PE + G + +D W F + E+ T QP G S +++ V
Sbjct: 191 GGKGLLPVRWMSPESLKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 247
Query: 266 VRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
+ + P P + ++ C++Y+ + RP +I+ K
Sbjct: 248 MEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 98/257 (38%), Gaps = 17/257 (6%)
Query: 22 DHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL- 80
DHL + I K + +G+G FGEV L ++ ++C AVK++
Sbjct: 7 DHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQEC------AVKVIS 60
Query: 81 -HPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQ 138
VK+ + L R L LK I L G ++ + Y G + D +
Sbjct: 61 KRQVKQKTDKESLLREVQL-LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS 119
Query: 139 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 198
K + S + R + GI +H I+ +LKP N +L + +
Sbjct: 120 RK--RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRI-IDFGLS 176
Query: 199 XXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV 258
S + ++GT Y+APE + G + D W + +L+G P G +
Sbjct: 177 THFEASKKMKDKIGTAYYIAPEV----LHGTYDEKCDVWSTGVILYILLSGCPPFNGANE 232
Query: 259 DEIYDAVVRRQEIPPIP 275
+I V + + +P
Sbjct: 233 YDILKKVEKGKYTFELP 249
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 6/132 (4%)
Query: 123 IIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN 181
I+++ EG + D++ K K + ++ Y + LA + LH GI+ +LKP N +L+
Sbjct: 216 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLS 273
Query: 182 EADRAVLGDVXXXXXXXXXXXXSSDLPRRL-GTPNYMAPEQWQPEVRGPISFETDSWGFA 240
+ L + + L R L GTP Y+APE + D W
Sbjct: 274 SQEEDCL--IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLG 331
Query: 241 CSIIEMLTGVQP 252
+ L+G P
Sbjct: 332 VILFICLSGYPP 343
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 5/162 (3%)
Query: 144 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 203
L+L ++ Y+ +A+G+ L S+ + +L N +L+E + + D
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 254
Query: 204 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY 262
RL +MAPE V + ++D W F + E+ + G P G +DE +
Sbjct: 255 VRKGDARLPL-KWMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 310
Query: 263 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
++ P P + +L C+ + RP ++++
Sbjct: 311 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 352
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 6/132 (4%)
Query: 123 IIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN 181
I+++ EG + D++ K K + ++ Y + LA + LH GI+ +LKP N +L+
Sbjct: 230 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLS 287
Query: 182 EADRAVLGDVXXXXXXXXXXXXSSDLPRRL-GTPNYMAPEQWQPEVRGPISFETDSWGFA 240
+ L + + L R L GTP Y+APE + D W
Sbjct: 288 SQEEDCL--IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLG 345
Query: 241 CSIIEMLTGVQP 252
+ L+G P
Sbjct: 346 VILFICLSGYPP 357
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 6/132 (4%)
Query: 123 IIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN 181
I+++ EG + D++ K K + ++ Y + LA + LH GI+ +LKP N +L+
Sbjct: 90 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLS 147
Query: 182 EADRAVLGDVXXXXXXXXXXXXSSDLPRRL-GTPNYMAPEQWQPEVRGPISFETDSWGFA 240
+ L + + L R L GTP Y+APE + D W
Sbjct: 148 SQEEDCL--IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLG 205
Query: 241 CSIIEMLTGVQP 252
+ L+G P
Sbjct: 206 VILFICLSGYPP 217
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 6/132 (4%)
Query: 123 IIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN 181
I+++ EG + D++ K K + ++ Y + LA + LH GI+ +LKP N +L+
Sbjct: 91 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLS 148
Query: 182 EADRAVLGDVXXXXXXXXXXXXSSDLPRRL-GTPNYMAPEQWQPEVRGPISFETDSWGFA 240
+ L + + L R L GTP Y+APE + D W
Sbjct: 149 SQEEDCL--IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLG 206
Query: 241 CSIIEMLTGVQP 252
+ L+G P
Sbjct: 207 VILFICLSGYPP 218
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 6/132 (4%)
Query: 123 IIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN 181
I+++ EG + D++ K K + ++ Y + LA + LH GI+ +LKP N +L+
Sbjct: 91 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLS 148
Query: 182 EADRAVLGDVXXXXXXXXXXXXSSDLPRRL-GTPNYMAPEQWQPEVRGPISFETDSWGFA 240
+ L + + L R L GTP Y+APE + D W
Sbjct: 149 SQEEDCL--IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLG 206
Query: 241 CSIIEMLTGVQP 252
+ L+G P
Sbjct: 207 VILFICLSGYPP 218
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 6/132 (4%)
Query: 123 IIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN 181
I+++ EG + D++ K K + ++ Y + LA + LH GI+ +LKP N +L+
Sbjct: 91 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLS 148
Query: 182 EADRAVLGDVXXXXXXXXXXXXSSDLPRRL-GTPNYMAPEQWQPEVRGPISFETDSWGFA 240
+ L + + L R L GTP Y+APE + D W
Sbjct: 149 SQEEDCL--IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLG 206
Query: 241 CSIIEMLTGVQP 252
+ L+G P
Sbjct: 207 VILFICLSGYPP 218
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 59/157 (37%), Gaps = 20/157 (12%)
Query: 124 IMKFYEGSVGDR-----MAQLKGGKLSLSNVFRY-------AIDLAQ---GILQLHSKGI 168
IMK YE R M +GG+L + R A+ + Q G LH I
Sbjct: 66 IMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNI 125
Query: 169 LVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRG 228
+ +LKP N +L R L + + RLGT Y+APE +R
Sbjct: 126 VHRDLKPENLLLESKSRDALIKI-VDFGLSAHFEVGGKMKERLGTAYYIAPEV----LRK 180
Query: 229 PISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV 265
+ D W + +L G P G++ EI V
Sbjct: 181 KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 217
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 83/215 (38%), Gaps = 13/215 (6%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
+G G +G V + + D VA+K +D+M + LK E +
Sbjct: 33 VGEGSYGMV------MKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENL 86
Query: 109 CWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGI 168
L + + ++ +F + ++ D + G L V +Y + GI HS I
Sbjct: 87 VNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG-LDYQVVQKYLFQIINGIGFCHSHNI 145
Query: 169 LVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRG 228
+ ++KP N +++++ L D D + T Y APE +V+
Sbjct: 146 IHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDD---EVATRWYRAPELLVGDVKY 202
Query: 229 PISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIY 262
+ D W C + EM G G S +D++Y
Sbjct: 203 GKA--VDVWAIGCLVTEMFMGEPLFPGDSDIDQLY 235
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 52/130 (40%), Gaps = 11/130 (8%)
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
G +++ NV + L +G+ H + +L +LKP N ++NE L D
Sbjct: 94 GNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADF--------G 145
Query: 201 XXXSSDLPRRLGTPNYMAPEQWQPEV-RGPISFET--DSWGFACSIIEMLTGVQPRCGRS 257
+ +P + + P++ G + T D WG C EM TG G +
Sbjct: 146 LARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGST 205
Query: 258 VDEIYDAVVR 267
V+E + R
Sbjct: 206 VEEQLHFIFR 215
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 26/189 (13%)
Query: 45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQG 104
L+ IG+G FGEVW EVAVKI +E E + L+ +
Sbjct: 46 LQESIGKGRFGEVWRGKW--------RGEEVAVKIFSSREERSWFREAEIYQTVMLRHEN 97
Query: 105 VEGICWLQGISVING---KICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGI 160
+ G ++ + NG ++ ++ ++E GS+ D + + +++ + + A+ A G+
Sbjct: 98 ILG--FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGL 152
Query: 161 LQLHSK--------GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLP-RRL 211
LH + I +LK N ++ + + D+ P R+
Sbjct: 153 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 212
Query: 212 GTPNYMAPE 220
GT YMAPE
Sbjct: 213 GTKRYMAPE 221
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 85/216 (39%), Gaps = 16/216 (7%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDR--MRVLLERL 95
+ P +L++ IG G +G V A ++ VA+K + P + R L E
Sbjct: 41 VGPRYTQLQY-IGEGAYGMVSSAYDHVRKT------RVAIKKISPFEHQTYCQRTLREIQ 93
Query: 96 NDLFLKCQGVEGICWLQGISVING--KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYA 153
L + + V GI + S + + I+ E D LK +LS ++ +
Sbjct: 94 ILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMET---DLYKLLKSQQLSNDHICYFL 150
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGT 213
+ +G+ +HS +L +LKP N ++N + D + L + T
Sbjct: 151 YQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVAT 210
Query: 214 PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
Y APE +G + D W C + EML+
Sbjct: 211 RWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 244
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 26/189 (13%)
Query: 45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQG 104
L+ IG+G FGEVW EVAVKI +E E + L+ +
Sbjct: 13 LQESIGKGRFGEVWRGKW--------RGEEVAVKIFSSREERSWFREAEIYQTVMLRHEN 64
Query: 105 VEGICWLQGISVING---KICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGI 160
+ G ++ + NG ++ ++ ++E GS+ D + + +++ + + A+ A G+
Sbjct: 65 ILG--FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGL 119
Query: 161 LQLHSK--------GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLP-RRL 211
LH + I +LK N ++ + + D+ P R+
Sbjct: 120 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 179
Query: 212 GTPNYMAPE 220
GT YMAPE
Sbjct: 180 GTKRYMAPE 188
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 115/283 (40%), Gaps = 31/283 (10%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL-FLK 101
+ + +G+G FG V+ +D E VA+K ++ R R+ E LN+ +K
Sbjct: 12 ITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERI--EFLNEASVMK 68
Query: 102 CQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-----------GKLSLSNVF 150
+ L G+ +IM+ + GD + L+ SLS +
Sbjct: 69 EFNCHHVVRLLGVVSQGQPTLVIMELM--TRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 126
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
+ A ++A G+ L++ + +L N ++ E +GD +D R+
Sbjct: 127 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIX-----ETDXXRK 181
Query: 211 LGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAV 265
G +M+PE + G + +D W F + E+ T QP G S +++ V
Sbjct: 182 GGKGLLPVRWMSPESLKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 238
Query: 266 VRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
+ + P P + ++ C++Y+ + RP +I+ K
Sbjct: 239 MEGGLLDK-PDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIK 280
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 10/148 (6%)
Query: 41 SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFL 100
+ +L +IG G FG+++L + S E EVA+K L VK ++ +E + +
Sbjct: 9 NKYRLGRKIGSGSFGDIYLGANIASGE------EVAIK-LECVKTKHPQLHIE--SKFYK 59
Query: 101 KCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGI 160
QG GI ++ ++M+ S+ D + K SL V A + I
Sbjct: 60 MMQGGVGIPSIKWCGAEGDYNVMVMELLGPSLED-LFNFCSRKFSLKTVLLLADQMISRI 118
Query: 161 LQLHSKGILVLNLKPFNFILNEADRAVL 188
+HSK + ++KP NF++ + L
Sbjct: 119 EYIHSKNFIHRDVKPDNFLMGLGKKGNL 146
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 114/283 (40%), Gaps = 31/283 (10%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL-FLK 101
+ + +G+G FG V+ +D E VA+K ++ R R+ E LN+ +K
Sbjct: 21 ITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERI--EFLNEASVMK 77
Query: 102 CQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-----------GKLSLSNVF 150
+ L G+ +IM+ + GD + L+ SLS +
Sbjct: 78 EFNCHHVVRLLGVVSQGQPTLVIMELM--TRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 135
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
+ A ++A G+ L++ + +L N ++ E +GD +D R+
Sbjct: 136 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY-----ETDYYRK 190
Query: 211 LGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAV 265
G +M+PE + G + +D W F + E+ T QP G S +++ V
Sbjct: 191 GGKGLLPVRWMSPESLKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 247
Query: 266 VRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
+ + P P + ++ C++Y+ + RP +I+ K
Sbjct: 248 MEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 26/189 (13%)
Query: 45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQG 104
L+ IG+G FGEVW EVAVKI +E E + L+ +
Sbjct: 8 LQESIGKGRFGEVWRGKW--------RGEEVAVKIFSSREERSWFREAEIYQTVMLRHEN 59
Query: 105 VEGICWLQGISVING---KICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGI 160
+ G ++ + NG ++ ++ ++E GS+ D + + +++ + + A+ A G+
Sbjct: 60 ILG--FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGL 114
Query: 161 LQLHSK--------GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLP-RRL 211
LH + I +LK N ++ + + D+ P R+
Sbjct: 115 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 174
Query: 212 GTPNYMAPE 220
GT YMAPE
Sbjct: 175 GTKRYMAPE 183
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 26/189 (13%)
Query: 45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQG 104
L+ IG+G FGEVW EVAVKI +E E + L+ +
Sbjct: 10 LQESIGKGRFGEVWRGKW--------RGEEVAVKIFSSREERSWFREAEIYQTVMLRHEN 61
Query: 105 VEGICWLQGISVING---KICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGI 160
+ G ++ + NG ++ ++ ++E GS+ D + + +++ + + A+ A G+
Sbjct: 62 ILG--FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGL 116
Query: 161 LQLHSK--------GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLP-RRL 211
LH + I +LK N ++ + + D+ P R+
Sbjct: 117 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 176
Query: 212 GTPNYMAPE 220
GT YMAPE
Sbjct: 177 GTKRYMAPE 185
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 26/189 (13%)
Query: 45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQG 104
L+ IG+G FGEVW EVAVKI +E E + L+ +
Sbjct: 33 LQESIGKGRFGEVWRGKW--------RGEEVAVKIFSSREERSWFREAEIYQTVMLRHEN 84
Query: 105 VEGICWLQGISVING---KICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGI 160
+ G ++ + NG ++ ++ ++E GS+ D + + +++ + + A+ A G+
Sbjct: 85 ILG--FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGL 139
Query: 161 LQLHSK--------GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLP-RRL 211
LH + I +LK N ++ + + D+ P R+
Sbjct: 140 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 199
Query: 212 GTPNYMAPE 220
GT YMAPE
Sbjct: 200 GTKRYMAPE 208
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 85/218 (38%), Gaps = 21/218 (9%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHP-VKEDRMRVLLERLNDLFLKCQGVEG 107
+G G + +V A +S ++ EY AVKI+ R RV R + +CQG +
Sbjct: 21 LGEGAYAKVQGA---VSLQNGKEY---AVKIIEKQAGHSRSRVF--REVETLYQCQGNKN 72
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGK-LSLSNVFRYAIDLAQGILQLHSK 166
I L+ I + F + G +A ++ K + R D+A + LH+K
Sbjct: 73 I--LELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTK 130
Query: 167 GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSS-------DLPRRLGTPNYMAP 219
GI +LKP N + ++ + +S +L G+ YMAP
Sbjct: 131 GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAP 190
Query: 220 EQWQPEVRGPISFE--TDSWGFACSIIEMLTGVQPRCG 255
E + ++ D W + ML+G P G
Sbjct: 191 EVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVG 228
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 72/169 (42%), Gaps = 14/169 (8%)
Query: 145 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS 204
+L + + A ++A G+ L++K + NL N ++ +GD
Sbjct: 129 TLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIY-----E 183
Query: 205 SDLPRRLGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 259
+D R+ G +MAPE + G + +D W F + E+ + QP G S +
Sbjct: 184 TDYYRKGGKGLLPVRWMAPESLK---DGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 240
Query: 260 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
++ V+ + P P V +++ C++++ RP +I+ + K
Sbjct: 241 QVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 288
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/207 (18%), Positives = 80/207 (38%), Gaps = 15/207 (7%)
Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L+G+ + + I+ + E D + + ++ + +A G+ L
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 137
Query: 167 GILVLNLKPFNFILNEADRAVLGD-----VXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQ 221
G + +L N ++N + D V +P R +P +A +
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 197
Query: 222 WQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP 280
+ + +D W + + E+++ G +P S ++ AV +PP P P
Sbjct: 198 F--------TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPA 248
Query: 281 AVENVLLGCFEYDLRSRPLMTDILRVF 307
A+ ++L C++ D +RP I+ +
Sbjct: 249 ALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 114/283 (40%), Gaps = 31/283 (10%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL-FLK 101
+ + +G+G FG V+ +D E VA+K ++ R R+ E LN+ +K
Sbjct: 14 ITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERI--EFLNEASVMK 70
Query: 102 CQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-----------GKLSLSNVF 150
+ L G+ +IM+ + GD + L+ SLS +
Sbjct: 71 EFNCHHVVRLLGVVSQGQPTLVIMELM--TRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
+ A ++A G+ L++ + +L N ++ E +GD +D R+
Sbjct: 129 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY-----ETDYYRK 183
Query: 211 LGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAV 265
G +M+PE + G + +D W F + E+ T QP G S +++ V
Sbjct: 184 GGKGLLPVRWMSPESLKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 240
Query: 266 VRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
+ + P P + ++ C++Y+ + RP +I+ K
Sbjct: 241 MEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 282
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 72/169 (42%), Gaps = 14/169 (8%)
Query: 145 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS 204
+L + + A ++A G+ L++K + NL N ++ +GD
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIY-----E 182
Query: 205 SDLPRRLGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 259
+D R+ G +MAPE + G + +D W F + E+ + QP G S +
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLK---DGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 260 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
++ V+ + P P V +++ C++++ RP +I+ + K
Sbjct: 240 QVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 114/283 (40%), Gaps = 31/283 (10%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL-FLK 101
+ + +G+G FG V+ +D E VA+K ++ R R+ E LN+ +K
Sbjct: 18 ITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERI--EFLNEASVMK 74
Query: 102 CQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-----------GKLSLSNVF 150
+ L G+ +IM+ + GD + L+ SLS +
Sbjct: 75 EFNCHHVVRLLGVVSQGQPTLVIMELM--TRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 132
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
+ A ++A G+ L++ + +L N ++ E +GD +D R+
Sbjct: 133 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY-----ETDYYRK 187
Query: 211 LGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAV 265
G +M+PE + G + +D W F + E+ T QP G S +++ V
Sbjct: 188 GGKGLLPVRWMSPESLKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 244
Query: 266 VRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
+ + P P + ++ C++Y+ + RP +I+ K
Sbjct: 245 MEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 286
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 26/189 (13%)
Query: 45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQG 104
L+ IG+G FGEVW EVAVKI +E E + L+ +
Sbjct: 7 LQESIGKGRFGEVWRGKW--------RGEEVAVKIFSSREERSWFREAEIYQTVMLRHEN 58
Query: 105 VEGICWLQGISVING---KICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGI 160
+ G ++ + NG ++ ++ ++E GS+ D + + +++ + + A+ A G+
Sbjct: 59 ILG--FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGL 113
Query: 161 LQLHSK--------GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLP-RRL 211
LH + I +LK N ++ + + D+ P R+
Sbjct: 114 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 173
Query: 212 GTPNYMAPE 220
GT YMAPE
Sbjct: 174 GTKRYMAPE 182
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 114/283 (40%), Gaps = 31/283 (10%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL-FLK 101
+ + +G+G FG V+ +D E VA+K ++ R R+ E LN+ +K
Sbjct: 17 ITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERI--EFLNEASVMK 73
Query: 102 CQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-----------GKLSLSNVF 150
+ L G+ +IM+ + GD + L+ SLS +
Sbjct: 74 EFNCHHVVRLLGVVSQGQPTLVIMELM--TRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 131
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
+ A ++A G+ L++ + +L N ++ E +GD +D R+
Sbjct: 132 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY-----ETDYYRK 186
Query: 211 LGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAV 265
G +M+PE + G + +D W F + E+ T QP G S +++ V
Sbjct: 187 GGKGLLPVRWMSPESLKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 243
Query: 266 VRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
+ + P P + ++ C++Y+ + RP +I+ K
Sbjct: 244 MEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 285
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 114/283 (40%), Gaps = 31/283 (10%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL-FLK 101
+ + +G+G FG V+ +D E VA+K ++ R R+ E LN+ +K
Sbjct: 20 ITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERI--EFLNEASVMK 76
Query: 102 CQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-----------GKLSLSNVF 150
+ L G+ +IM+ + GD + L+ SLS +
Sbjct: 77 EFNCHHVVRLLGVVSQGQPTLVIMELM--TRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
+ A ++A G+ L++ + +L N ++ E +GD +D R+
Sbjct: 135 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY-----ETDYYRK 189
Query: 211 LGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAV 265
G +M+PE + G + +D W F + E+ T QP G S +++ V
Sbjct: 190 GGKGLLPVRWMSPESLKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 246
Query: 266 VRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
+ + P P + ++ C++Y+ + RP +I+ K
Sbjct: 247 MEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 288
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 77/187 (41%), Gaps = 26/187 (13%)
Query: 99 FLKCQGVEGICWLQGISVIN-----------------GKICIIMKFYEG-SVGDRMAQLK 140
F+K +G + + + IS++N ++ +I +F G + +R+
Sbjct: 37 FVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERI-NTS 95
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
+L+ + Y + + + LHS I +++P N I+ + R+ +
Sbjct: 96 AFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPEN-IIYQTRRS--STIKIIEFGQAR 152
Query: 201 XXXSSDLPRRLGT-PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD 259
D R L T P Y APE Q +V +S TD W + +L+G+ P +
Sbjct: 153 QLKPGDNFRLLFTAPEYYAPEVHQHDV---VSTATDMWSLGTLVYVLLSGINPFLAETNQ 209
Query: 260 EIYDAVV 266
+I + ++
Sbjct: 210 QIIENIM 216
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 74/169 (43%), Gaps = 14/169 (8%)
Query: 145 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS 204
+L + + A ++A G+ L++K + +L N ++ +GD
Sbjct: 125 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIX-----E 179
Query: 205 SDLPRRLGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 259
+D R+ G +MAPE + G + +D W F + E+ + QP G S +
Sbjct: 180 TDXXRKGGKGLLPVRWMAPESLKD---GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 236
Query: 260 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
++ V+ + P P V +++ C++++ + RP +I+ + K
Sbjct: 237 QVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 284
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 114/283 (40%), Gaps = 31/283 (10%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL-FLK 101
+ + +G+G FG V+ +D E VA+K ++ R R+ E LN+ +K
Sbjct: 20 ITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERI--EFLNEASVMK 76
Query: 102 CQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-----------GKLSLSNVF 150
+ L G+ +IM+ + GD + L+ SLS +
Sbjct: 77 EFNCHHVVRLLGVVSQGQPTLVIMELM--TRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
+ A ++A G+ L++ + +L N ++ E +GD +D R+
Sbjct: 135 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY-----ETDYYRK 189
Query: 211 LGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAV 265
G +M+PE + G + +D W F + E+ T QP G S +++ V
Sbjct: 190 GGKGLLPVRWMSPESLKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 246
Query: 266 VRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
+ + P P + ++ C++Y+ + RP +I+ K
Sbjct: 247 MEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 288
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 57/141 (40%), Gaps = 14/141 (9%)
Query: 114 ISVINGKICI--IMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVL 171
I VI+ + C+ + +F E + + + K G L S + Y L +G+ H IL
Sbjct: 85 IDVIHSERCLTLVFEFMEKDLKKVLDENKTG-LQDSQIKIYLYQLLRGVAHCHQHRILHR 143
Query: 172 NLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV-RGPI 230
+LKP N ++N L D + +P R T + P+V G
Sbjct: 144 DLKPQNLLINSDGALKLADFGLAR--------AFGIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 231 SFET--DSWGFACSIIEMLTG 249
+ T D W C EM+TG
Sbjct: 196 KYSTSVDIWSIGCIFAEMITG 216
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 57/141 (40%), Gaps = 14/141 (9%)
Query: 114 ISVINGKICI--IMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVL 171
I VI+ + C+ + +F E + + + K G L S + Y L +G+ H IL
Sbjct: 85 IDVIHSERCLTLVFEFMEKDLKKVLDENKTG-LQDSQIKIYLYQLLRGVAHCHQHRILHR 143
Query: 172 NLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV-RGPI 230
+LKP N ++N L D + +P R T + P+V G
Sbjct: 144 DLKPQNLLINSDGALKLADFGLAR--------AFGIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 231 SFET--DSWGFACSIIEMLTG 249
+ T D W C EM+TG
Sbjct: 196 KYSTSVDIWSIGCIFAEMITG 216
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 114/283 (40%), Gaps = 31/283 (10%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL-FLK 101
+ + +G+G FG V+ +D E VA+K ++ R R+ E LN+ +K
Sbjct: 27 ITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERI--EFLNEASVMK 83
Query: 102 CQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-----------GKLSLSNVF 150
+ L G+ +IM+ + GD + L+ SLS +
Sbjct: 84 EFNCHHVVRLLGVVSQGQPTLVIMELM--TRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 141
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
+ A ++A G+ L++ + +L N ++ E +GD +D R+
Sbjct: 142 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY-----ETDYYRK 196
Query: 211 LGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAV 265
G +M+PE + G + +D W F + E+ T QP G S +++ V
Sbjct: 197 GGKGLLPVRWMSPESLK---DGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 253
Query: 266 VRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
+ + P P + ++ C++Y+ + RP +I+ K
Sbjct: 254 MEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 295
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 10/119 (8%)
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV---LGDVXXXXXXXXXXXXSSDLP 208
Y + + + H I+ ++KP N +L + + LGD +
Sbjct: 135 YMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGG-- 192
Query: 209 RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR 267
R+GTP++MAPE + R P D WG + +L+G P G + + +++ +++
Sbjct: 193 -RVGTPHFMAPEVVK---REPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIK 246
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 53/134 (39%), Gaps = 10/134 (7%)
Query: 119 GKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNF 178
+ I+ ++ E + + + Q G L + + L +G+ +HS +L +LKP N
Sbjct: 95 NSVYIVQEYMETDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANL 151
Query: 179 ILNEADRAV-LGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFE--TD 235
+N D + +GD L L T Y +P + P ++ D
Sbjct: 152 FINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRL----LLSPNNYTKAID 207
Query: 236 SWGFACSIIEMLTG 249
W C EMLTG
Sbjct: 208 MWAAGCIFAEMLTG 221
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 99/262 (37%), Gaps = 23/262 (8%)
Query: 52 GPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGICWL 111
G FG+V+ A + ++ A K++ E+ + + + D+ C + L
Sbjct: 21 GDFGKVYKAQNKETSV------LAAAKVIDTKSEEELEDYMVEI-DILASCDHPNIVKLL 73
Query: 112 QGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVL 171
N + I+++F G D + L+ S + + LH I+
Sbjct: 74 DAFYYENN-LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHR 132
Query: 172 NLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQPEVRG 228
+LK N + + GD+ + + RR +GTP +MAPE E
Sbjct: 133 DLKAGNILF-----TLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSK 187
Query: 229 --PISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPI---PSGLPPAVE 283
P ++ D W ++IEM P + + + + + PP PS +
Sbjct: 188 DRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE--PPTLAQPSRWSSNFK 245
Query: 284 NVLLGCFEYDLRSRPLMTDILR 305
+ L C E ++ +R + +L+
Sbjct: 246 DFLKKCLEKNVDARWTTSQLLQ 267
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 114/283 (40%), Gaps = 31/283 (10%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL-FLK 101
+ + +G+G FG V+ +D E VA+K ++ R R+ E LN+ +K
Sbjct: 49 ITMSRELGQGSFGMVYEGVAKGVVKDEPE-TRVAIKTVNEAASMRERI--EFLNEASVMK 105
Query: 102 CQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-----------GKLSLSNVF 150
+ L G+ +IM+ + GD + L+ SLS +
Sbjct: 106 EFNCHHVVRLLGVVSQGQPTLVIMELM--TRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 163
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
+ A ++A G+ L++ + +L N ++ E +GD +D R+
Sbjct: 164 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY-----ETDYYRK 218
Query: 211 LGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAV 265
G +M+PE + G + +D W F + E+ T QP G S +++ V
Sbjct: 219 GGKGLLPVRWMSPESLKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 275
Query: 266 VRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
+ + P P + ++ C++Y+ + RP +I+ K
Sbjct: 276 MEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 317
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 114/283 (40%), Gaps = 31/283 (10%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL-FLK 101
+ + +G+G FG V+ +D E VA+K ++ R R+ E LN+ +K
Sbjct: 27 ITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERI--EFLNEASVMK 83
Query: 102 CQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-----------GKLSLSNVF 150
+ L G+ +IM+ + GD + L+ SLS +
Sbjct: 84 EFNCHHVVRLLGVVSQGQPTLVIMELM--TRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 141
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
+ A ++A G+ L++ + +L N ++ E +GD +D R+
Sbjct: 142 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY-----ETDYYRK 196
Query: 211 LGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAV 265
G +M+PE + G + +D W F + E+ T QP G S +++ V
Sbjct: 197 GGKGLLPVRWMSPESLK---DGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 253
Query: 266 VRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
+ + P P + ++ C++Y+ + RP +I+ K
Sbjct: 254 MEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 295
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 74/169 (43%), Gaps = 14/169 (8%)
Query: 145 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS 204
+L + + A ++A G+ L++K + +L N ++ +GD
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIX-----E 182
Query: 205 SDLPRRLGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 259
+D R+ G +MAPE + G + +D W F + E+ + QP G S +
Sbjct: 183 TDXXRKGGKGLLPVRWMAPESLK---DGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 260 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
++ V+ + P P V +++ C++++ + RP +I+ + K
Sbjct: 240 QVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 78/222 (35%), Gaps = 53/222 (23%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 10 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 61
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + D M + L + Y L QG
Sbjct: 62 ------PNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN---- 215
+ HS +L +LKP N ++N L D L R G P
Sbjct: 116 LAFCHSHRVLHRDLKPENLLINTEGAIKLADF--------------GLARAFGVPVRTYX 161
Query: 216 -------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 248
Y APE + G + T D W C EM+T
Sbjct: 162 HEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 73/169 (43%), Gaps = 14/169 (8%)
Query: 145 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS 204
+L + + A ++A G+ L++K + +L N ++ +GD
Sbjct: 127 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY-----E 181
Query: 205 SDLPRRLGTP----NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 259
+D R+ G +MAPE + G + +D W F + E+ + QP G S +
Sbjct: 182 TDYYRKGGKGLLPVRWMAPESLKD---GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 238
Query: 260 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
++ V+ + P P V +++ C++++ + RP +I+ + K
Sbjct: 239 QVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 57/295 (19%), Positives = 117/295 (39%), Gaps = 21/295 (7%)
Query: 25 RTAVATSNDTNAWIKP-SALKLRHRIGRGPFGEVWLATHYLSTEDCDEYH-EVAVKILHP 82
R A TS W P L++ IG+G FG+V+ +H EVA++++
Sbjct: 16 RKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHG----------RWHGEVAIRLIDI 65
Query: 83 VKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGG 142
+++ ++ + + + E + G + + II +G + +
Sbjct: 66 ERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKI 125
Query: 143 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 202
L ++ + A ++ +G+ LH+KGIL +LK N + + + V+ D
Sbjct: 126 VLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKN-VFYDNGKVVITDFGLFSISGVLQA 184
Query: 203 XSSDLPRRL--GTPNYMAPE---QWQP---EVRGPISFETDSWGFACSIIEMLTGVQPRC 254
+ R+ G ++APE Q P E + P S +D + E+ P
Sbjct: 185 GRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFK 244
Query: 255 GRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 309
+ + I + + G+ + ++LL C+ ++ RP T ++ + +
Sbjct: 245 TQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEK 299
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 46/117 (39%), Gaps = 2/117 (1%)
Query: 133 GDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVX 192
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 130 ADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFG 189
Query: 193 XXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ L + T Y APE +G + D W C + EML+
Sbjct: 190 LARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 244
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 134 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 113 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGL 172
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ L + T Y APE +G + D W C + EML+
Sbjct: 173 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 226
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 73/169 (43%), Gaps = 14/169 (8%)
Query: 145 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS 204
+L + + A ++A G+ L++K + +L N ++ +GD
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY-----E 182
Query: 205 SDLPRRLGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 259
+D R+ G +MAPE + G + +D W F + E+ + QP G S +
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLK---DGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 260 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
++ V+ + P P V +++ C++++ + RP +I+ + K
Sbjct: 240 QVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 12/134 (8%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE-RLNDLFLKCQGVE 106
+IG G FGE+ L + + E VA+K L P+K ++ LE R +GV
Sbjct: 11 KIGCGNFGELRLGKNLYTNE------YVAIK-LEPIKSRAPQLHLEYRFYKQLSATEGVP 63
Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
+ + N + ++ G + + L +L V AI L + +H+K
Sbjct: 64 QVYYFGPXGKYNAMVLELL----GPSLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHTK 119
Query: 167 GILVLNLKPFNFIL 180
++ ++KP NF++
Sbjct: 120 SLIYRDVKPENFLV 133
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 74/193 (38%), Gaps = 17/193 (8%)
Query: 118 NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFN 177
NG + ++ ++G + QL G + RY DL L ++ +LV + N
Sbjct: 134 NGSLDTFLRTHDGQF--TIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDS----N 187
Query: 178 FILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSW 237
+ +D L V +P R P +A + S +D W
Sbjct: 188 LVCKVSDFG-LSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTF--------SSASDVW 238
Query: 238 GFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 296
F + E+L G +P + ++ +V +P P G P A+ ++L C+ D
Sbjct: 239 SFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPA-PMGCPHALHQLMLDCWHKDRAQ 297
Query: 297 RPLMTDILRVFKS 309
RP + I+ V +
Sbjct: 298 RPRFSQIVSVLDA 310
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 78/222 (35%), Gaps = 53/222 (23%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 12 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 63
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + D M + L + Y L QG
Sbjct: 64 ------PNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN---- 215
+ HS +L +LKP N ++N L D L R G P
Sbjct: 118 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------------GLARAFGVPVRTYX 163
Query: 216 -------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 248
Y APE + G + T D W C EM+T
Sbjct: 164 HEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 78/222 (35%), Gaps = 53/222 (23%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 13 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 64
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + D M + L + Y L QG
Sbjct: 65 ------PNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN---- 215
+ HS +L +LKP N ++N L D L R G P
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------------GLARAFGVPVRTYX 164
Query: 216 -------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 248
Y APE + G + T D W C EM+T
Sbjct: 165 HEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 75/193 (38%), Gaps = 17/193 (8%)
Query: 118 NGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFN 177
NG + ++ ++G + QL G + RY DL L ++ +LV + N
Sbjct: 134 NGSLDTFLRTHDGQF--TIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDS----N 187
Query: 178 FILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSW 237
+ +D L V +P R P +A + S +D W
Sbjct: 188 LVCKVSDFG-LSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTF--------SSASDVW 238
Query: 238 GFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 296
F + E+L G +P + ++ +V +P P G P A+ ++L C+ D
Sbjct: 239 SFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPA-PMGCPHALHQLMLDCWHKDRAQ 297
Query: 297 RPLMTDILRVFKS 309
RP + I+ V +
Sbjct: 298 RPRFSQIVSVLDA 310
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 113/283 (39%), Gaps = 31/283 (10%)
Query: 43 LKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL-FLK 101
+ + +G+G FG V+ +D E VA+K ++ R R+ E LN+ +K
Sbjct: 14 ITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERI--EFLNEASVMK 70
Query: 102 CQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKG-----------GKLSLSNVF 150
+ L G+ +IM+ + GD + L+ SLS +
Sbjct: 71 EFNCHHVVRLLGVVSQGQPTLVIMELM--TRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
+ A ++A G+ L++ + +L N + E +GD +D R+
Sbjct: 129 QMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIY-----ETDYYRK 183
Query: 211 LGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAV 265
G +M+PE + G + +D W F + E+ T QP G S +++ V
Sbjct: 184 GGKGLLPVRWMSPESLKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 240
Query: 266 VRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
+ + P P + ++ C++Y+ + RP +I+ K
Sbjct: 241 MEGGLLDK-PDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIK 282
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 151 RYAIDLAQGILQLHSK---GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDL 207
R A+ A+G+ LH I+ ++K N +L+E AV+GD
Sbjct: 143 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA 202
Query: 208 PRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
R GT ++APE G S +TD +G+ ++E++TG
Sbjct: 203 VR--GTIGHIAPEYLST---GKSSEKTDVFGYGVMLLELITG 239
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 99/266 (37%), Gaps = 24/266 (9%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
+G G FG+V+ A + ++ A K++ E+ + + + D+ C
Sbjct: 44 ELGDGAFGKVYKAQNKETS------VLAAAKVIDTKSEEELEDYMVEI-DILASCDHPNI 96
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG 167
+ L N + I+++F G D + L+ S + + LH
Sbjct: 97 VKLLDAFYYENN-LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQP 224
I+ +LK N + L D + + RR +GTP +MAPE
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKN------TRTIQRRDSFIGTPYWMAPEVVMC 209
Query: 225 EVRG--PISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPI---PSGLP 279
E P ++ D W ++IEM P + + + + + PP PS
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE--PPTLAQPSRWS 267
Query: 280 PAVENVLLGCFEYDLRSRPLMTDILR 305
++ L C E ++ +R + +L+
Sbjct: 268 SNFKDFLKKCLEKNVDARWTTSQLLQ 293
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 134 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 115 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGL 174
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ L + T Y APE +G + D W C + EML+
Sbjct: 175 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 228
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 99/266 (37%), Gaps = 24/266 (9%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
+G G FG+V+ A + ++ A K++ E+ + + + D+ C
Sbjct: 44 ELGDGAFGKVYKAQNKETS------VLAAAKVIDTKSEEELEDYMVEI-DILASCDHPNI 96
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG 167
+ L N + I+++F G D + L+ S + + LH
Sbjct: 97 VKLLDAFYYENN-LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQP 224
I+ +LK N + L D + + RR +GTP +MAPE
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKN------TRXIQRRDXFIGTPYWMAPEVVMC 209
Query: 225 EVRG--PISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPI---PSGLP 279
E P ++ D W ++IEM P + + + + + PP PS
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE--PPTLAQPSRWS 267
Query: 280 PAVENVLLGCFEYDLRSRPLMTDILR 305
++ L C E ++ +R + +L+
Sbjct: 268 SNFKDFLKKCLEKNVDARWTTSQLLQ 293
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 134 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 111 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGL 170
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ L + T Y APE +G + D W C + EML+
Sbjct: 171 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 224
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 70/170 (41%), Gaps = 17/170 (10%)
Query: 106 EGICWLQGISVINGKICIIMKFYEG-SVGDRMAQLKG--GKLSLSNVFRYAIDLAQGILQ 162
E I L+ I + ++M+ G + DR+ + KG + S + R +D +
Sbjct: 80 ENIVALEDIYESPNHLYLVMQLVSGGELFDRIVE-KGFYTEKDASTLIRQVLD---AVYY 135
Query: 163 LHSKGILVLNLKPFNFIL---NEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
LH GI+ +LKP N + +E + ++ D S+ GTP Y+AP
Sbjct: 136 LHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMST----ACGTPGYVAP 191
Query: 220 EQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ 269
E + P S D W +L G P + ++++ +++ +
Sbjct: 192 EVL---AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAE 238
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 99/266 (37%), Gaps = 24/266 (9%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
+G G FG+V+ A + ++ A K++ E+ + + + D+ C
Sbjct: 44 ELGDGAFGKVYKAQNKETS------VLAAAKVIDTKSEEELEDYMVEI-DILASCDHPNI 96
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG 167
+ L N + I+++F G D + L+ S + + LH
Sbjct: 97 VKLLDAFYYENN-LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQP 224
I+ +LK N + L D + + RR +GTP +MAPE
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKN------TRXIQRRDSFIGTPYWMAPEVVMC 209
Query: 225 EVRG--PISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPI---PSGLP 279
E P ++ D W ++IEM P + + + + + PP PS
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE--PPTLAQPSRWS 267
Query: 280 PAVENVLLGCFEYDLRSRPLMTDILR 305
++ L C E ++ +R + +L+
Sbjct: 268 SNFKDFLKKCLEKNVDARWTTSQLLQ 293
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 134 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 111 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGL 170
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ L + T Y APE +G + D W C + EML+
Sbjct: 171 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 224
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 106/283 (37%), Gaps = 33/283 (11%)
Query: 38 IKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRV-LLERLN 96
+ S +K+ IG G FGEV L + +VAV I ++V E+
Sbjct: 40 LDASCIKIERVIGAGEFGEVCSGRLKLPGK-----RDVAVAI------KTLKVGYTEKQR 88
Query: 97 DLFLKCQGVEG------ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVF 150
FL + G + L+G+ + I+++F E D + G+ ++ +
Sbjct: 89 RDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLV 148
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD-----VXXXXXXXXXXXXSS 205
+A G+ L G + +L N ++N + D V
Sbjct: 149 GMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGG 208
Query: 206 DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDA 264
+P R + APE Q + +D W + + E+++ G +P S ++ A
Sbjct: 209 KIPVR-----WTAPEAIQYR---KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKA 260
Query: 265 VVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 307
+ +P P P + ++L C++ + RP I+ +
Sbjct: 261 IEEGYRLPA-PMDCPAGLHQLMLDCWQKERAERPKFEQIVGIL 302
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 5/131 (3%)
Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 189
G + D +A+ + L+ + + G+ LHS I +LKP N +L + +
Sbjct: 99 GELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR 156
Query: 190 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ GTP ++APE E P+ E D W +L+G
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 213
Query: 250 VQPRCGRSVDE 260
P G + E
Sbjct: 214 ASPFLGDTKQE 224
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 5/131 (3%)
Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 189
G + D +A+ + L+ + + G+ LHS I +LKP N +L + +
Sbjct: 98 GELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR 155
Query: 190 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ GTP ++APE E P+ E D W +L+G
Sbjct: 156 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 212
Query: 250 VQPRCGRSVDE 260
P G + E
Sbjct: 213 ASPFLGDTKQE 223
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 134 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 111 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGL 170
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ L + T Y APE +G + D W C + EML+
Sbjct: 171 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 224
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 5/131 (3%)
Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 189
G + D +A+ + L+ + + G+ LHS I +LKP N +L + +
Sbjct: 99 GELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR 156
Query: 190 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ GTP ++APE E P+ E D W +L+G
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 213
Query: 250 VQPRCGRSVDE 260
P G + E
Sbjct: 214 ASPFLGDTKQE 224
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 134 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 115 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGL 174
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ L + T Y APE +G + D W C + EML+
Sbjct: 175 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 228
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 5/131 (3%)
Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 189
G + D +A+ + L+ + + G+ LHS I +LKP N +L + +
Sbjct: 98 GELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR 155
Query: 190 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ GTP ++APE E P+ E D W +L+G
Sbjct: 156 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 212
Query: 250 VQPRCGRSVDE 260
P G + E
Sbjct: 213 ASPFLGDTKQE 223
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 5/131 (3%)
Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 189
G + D +A+ + L+ + + G+ LHS I +LKP N +L + +
Sbjct: 99 GELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR 156
Query: 190 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ GTP ++APE E P+ E D W +L+G
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 213
Query: 250 VQPRCGRSVDE 260
P G + E
Sbjct: 214 ASPFLGDTKQE 224
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 5/131 (3%)
Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 189
G + D +A+ + L+ + + G+ LHS I +LKP N +L + +
Sbjct: 99 GELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR 156
Query: 190 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ GTP ++APE E P+ E D W +L+G
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 213
Query: 250 VQPRCGRSVDE 260
P G + E
Sbjct: 214 ASPFLGDTKQE 224
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 5/131 (3%)
Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 189
G + D +A+ + L+ + + G+ LHS I +LKP N +L + +
Sbjct: 99 GELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR 156
Query: 190 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ GTP ++APE E P+ E D W +L+G
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 213
Query: 250 VQPRCGRSVDE 260
P G + E
Sbjct: 214 ASPFLGDTKQE 224
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 71/169 (42%), Gaps = 14/169 (8%)
Query: 145 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS 204
+L + + A ++A G+ L++K + +L N ++ +GD
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYR 187
Query: 205 SD----LPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 259
LP R +MAPE + G + +D W F + E+ + QP G S +
Sbjct: 188 KGGKGLLPVR-----WMAPESLK---DGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 260 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
++ V+ + P P V +++ C++++ + RP +I+ + K
Sbjct: 240 QVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 73/169 (43%), Gaps = 14/169 (8%)
Query: 145 SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXS 204
+L + + A ++A G+ L++K + +L N ++ +GD
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIX-----E 182
Query: 205 SDLPRRLGT----PNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 259
+D R+ G +MAPE + G + +D W F + E+ + QP G S +
Sbjct: 183 TDXXRKGGKGLLPVRWMAPESLK---DGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 260 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 308
++ V+ + P P V +++ C++++ RP +I+ + K
Sbjct: 240 QVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 5/131 (3%)
Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 189
G + D +A+ + L+ + + G+ LHS I +LKP N +L + +
Sbjct: 99 GELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR 156
Query: 190 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ GTP ++APE E P+ E D W +L+G
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 213
Query: 250 VQPRCGRSVDE 260
P G + E
Sbjct: 214 ASPFLGDTKQE 224
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 96/257 (37%), Gaps = 17/257 (6%)
Query: 22 DHLRTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL- 80
DHL + I K + +G+G FGEV L ++ ++C AVK++
Sbjct: 7 DHLHATPGXFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQEC------AVKVIS 60
Query: 81 -HPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQ 138
VK+ + L R L LK I L G ++ + Y G + D +
Sbjct: 61 KRQVKQKTDKESLLREVQL-LKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIIS 119
Query: 139 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 198
K + S + R + GI H I+ +LKP N +L + +
Sbjct: 120 RK--RFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRI-IDFGLS 176
Query: 199 XXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV 258
S ++GT Y+APE + G + D W + +L+G P G +
Sbjct: 177 THFEASKKXKDKIGTAYYIAPEV----LHGTYDEKCDVWSTGVILYILLSGCPPFNGANE 232
Query: 259 DEIYDAVVRRQEIPPIP 275
+I V + + +P
Sbjct: 233 YDILKKVEKGKYTFELP 249
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 5/131 (3%)
Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 189
G + D +A+ + L+ + + G+ LHS I +LKP N +L + +
Sbjct: 99 GELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR 156
Query: 190 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ GTP ++APE E P+ E D W +L+G
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 213
Query: 250 VQPRCGRSVDE 260
P G + E
Sbjct: 214 ASPFLGDTKQE 224
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 5/131 (3%)
Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 189
G + D +A+ + L+ + + G+ LHS I +LKP N +L + +
Sbjct: 99 GELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR 156
Query: 190 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ GTP ++APE E P+ E D W +L+G
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 213
Query: 250 VQPRCGRSVDE 260
P G + E
Sbjct: 214 ASPFLGDTKQE 224
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 40/105 (38%), Gaps = 3/105 (2%)
Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN 215
+ G+ LHS I +LKP N +L + + ++ GTP
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE 260
++APE E P+ E D W +L+G P G + E
Sbjct: 183 FVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 134 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 131 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 190
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ L + T Y APE +G + D W C + EML+
Sbjct: 191 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 244
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 5/131 (3%)
Query: 130 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 189
G + D +A+ + L+ + + G+ LHS I +LKP N +L + +
Sbjct: 99 GELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR 156
Query: 190 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ GTP ++APE E P+ E D W +L+G
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSG 213
Query: 250 VQPRCGRSVDE 260
P G + E
Sbjct: 214 ASPFLGDTKQE 224
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 134 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 111 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 170
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ L + T Y APE +G + D W C + EML+
Sbjct: 171 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 224
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 134 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 119 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 178
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ L + T Y APE +G + D W C + EML+
Sbjct: 179 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 232
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 134 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 111 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 170
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ L + T Y APE +G + D W C + EML+
Sbjct: 171 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 224
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 134 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 113 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 172
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ L + T Y APE +G + D W C + EML+
Sbjct: 173 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 226
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 5/102 (4%)
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
Y DL +GI LH + I+ ++KP N ++ E + D + L +
Sbjct: 142 YFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADF---GVSNEFKGSDALLSNTV 198
Query: 212 GTPNYMAPEQWQPEVRGPISFET-DSWGFACSIIEMLTGVQP 252
GTP +MAPE E R S + D W ++ + G P
Sbjct: 199 GTPAFMAPESLS-ETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 82/219 (37%), Gaps = 33/219 (15%)
Query: 45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL----------HPVKEDRMRVLLER 94
L +G G +GEV LA + ++ E VAVKI+ + KE + +L
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENIKKEIXINKMLNH 63
Query: 95 LNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAI 154
N + EG + +G G + DR+ G + + R+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSG----------GELFDRIEPDIG--MPEPDAQRFFH 111
Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTP 214
L G++ LH GI ++KP N +L+E D + D L + GT
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTL 170
Query: 215 NYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 252
Y+APE + R E D W + ML G P
Sbjct: 171 PYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 134 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 109 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 168
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ L + T Y APE +G + D W C + EML+
Sbjct: 169 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 222
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 134 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 115 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 174
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ L + T Y APE +G + D W C + EML+
Sbjct: 175 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 228
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 134 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 113 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 172
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ L + T Y APE +G + D W C + EML+
Sbjct: 173 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 226
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 134 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 109 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 168
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ L + T Y APE +G + D W C + EML+
Sbjct: 169 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 222
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 134 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 116 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 175
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ L + T Y APE +G + D W C + EML+
Sbjct: 176 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 229
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 43/163 (26%)
Query: 40 PSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLF 99
P ++H IGRG +G V+LA D + VA+K ++ + ED
Sbjct: 25 PDNYIIKHLIGRGSYGYVYLAY------DKNTEKNVAIKKVNRMFED------------L 66
Query: 100 LKCQGVEGICWLQGISVING-KICIIMKFYEGSVGDRMAQ-------LKGGKLSLSNVFR 151
+ C+ + L+ I+++N K I++ Y+ + D + + L+ L +F+
Sbjct: 67 IDCKRI-----LREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFK 121
Query: 152 YAIDLAQGILQ------------LHSKGILVLNLKPFNFILNE 182
I L + ++ +H GI+ +LKP N +LN+
Sbjct: 122 TPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQ 164
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 134 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 117 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 176
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ L + T Y APE +G + D W C + EML+
Sbjct: 177 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 230
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 134 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 108 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 167
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ L + T Y APE +G + D W C + EML+
Sbjct: 168 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 221
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 134 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 115 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 174
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ L + T Y APE +G + D W C + EML+
Sbjct: 175 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 228
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 82/219 (37%), Gaps = 33/219 (15%)
Query: 45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL----------HPVKEDRMRVLLER 94
L +G G +GEV LA + ++ E VAVKI+ + KE + +L
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENIKKEIXINKMLNH 63
Query: 95 LNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAI 154
N + EG + +G G + DR+ G + + R+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSG----------GELFDRIEPDIG--MPEPDAQRFFH 111
Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTP 214
L G++ LH GI ++KP N +L+E D + D L + GT
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMXGTL 170
Query: 215 NYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 252
Y+APE + R E D W + ML G P
Sbjct: 171 PYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 77/199 (38%), Gaps = 42/199 (21%)
Query: 43 LKLRHRIGRGPFGEVWLATH---------YLSTEDCDEYHEVAVKILHPVKEDRMRVLLE 93
+++ +IG+G +GEVW+ + +TE+ + E + VL+
Sbjct: 39 IQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEI---------YQTVLMR 89
Query: 94 RLNDLFLKCQGVEGI-CWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFR 151
N L ++G W Q + +I ++E GS+ D LK L ++ +
Sbjct: 90 HENILGFIAADIKGTGSWTQ--------LYLITDYHENGSLYD---YLKSTTLDAKSMLK 138
Query: 152 YAIDLAQGILQLHSK--------GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 203
A G+ LH++ I +LK N ++ + + D+
Sbjct: 139 LAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADL-GLAVKFISDTN 197
Query: 204 SSDLP--RRLGTPNYMAPE 220
D+P R+GT YM PE
Sbjct: 198 EVDIPPNTRVGTKRYMPPE 216
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 82/219 (37%), Gaps = 33/219 (15%)
Query: 45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL----------HPVKEDRMRVLLER 94
L +G G +GEV LA + ++ E VAVKI+ + KE + +L
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENIKKEIXINKMLNH 64
Query: 95 LNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAI 154
N + EG + +G G + DR+ G + + R+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSG----------GELFDRIEPDIG--MPEPDAQRFFH 112
Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTP 214
L G++ LH GI ++KP N +L+E D + D L + GT
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMXGTL 171
Query: 215 NYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 252
Y+APE + R E D W + ML G P
Sbjct: 172 PYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 65/161 (40%), Gaps = 17/161 (10%)
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD---VXXXXXXXXXXXXSSDLPR- 209
I +A+ + LHSKG++ +LKP N D +GD V + +P
Sbjct: 171 IQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 230
Query: 210 -----RLGTPNYMAPEQWQPEVRG-PISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYD 263
++GT YM+PEQ + G S + D + + E+L + R V I D
Sbjct: 231 ATHXGQVGTKLYMSPEQ----IHGNNYSHKVDIFSLGLILFELLYSFSTQMER-VRIITD 285
Query: 264 AVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
VR + P + + P ++ RP TDI+
Sbjct: 286 --VRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDII 324
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 134 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 115 DLYKLLKCQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 174
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ L + T Y APE +G + D W C + EML+
Sbjct: 175 ARVADPDHDHTGFLTEYVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 228
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 134 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 115 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 174
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ L + T Y APE +G + D W C + EML+
Sbjct: 175 ARVADPDHDHTGFLXEXVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 228
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 134 DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXX 193
D LK LS ++ + + +G+ +HS +L +LKP N +LN + D
Sbjct: 116 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGL 175
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ L + T Y APE +G + D W C + EML+
Sbjct: 176 ARVADPDHDHTGFLXEXVATRWYRAPE-IMLNSKG-YTKSIDIWSVGCILAEMLSN 229
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 82/219 (37%), Gaps = 33/219 (15%)
Query: 45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL----------HPVKEDRMRVLLER 94
L +G G +GEV LA + ++ E VAVKI+ + KE + +L
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENIKKEICINAMLNH 64
Query: 95 LNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAI 154
N + EG + +G G + DR+ G + + R+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSG----------GELFDRIEPDIG--MPEPDAQRFFH 112
Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTP 214
L G++ LH GI ++KP N +L+E D + D L + GT
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTL 171
Query: 215 NYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 252
Y+APE + R E D W + ML G P
Sbjct: 172 PYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 77/212 (36%), Gaps = 33/212 (15%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 10 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 61
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + M + L + Y L QG
Sbjct: 62 ------PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
+ HS +L +LKP N ++N L D + +P R T +
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------GLARAFGVPVRTYTHEVVTL 167
Query: 220 EQWQPEV-RGPISFET--DSWGFACSIIEMLT 248
PE+ G + T D W C EM+T
Sbjct: 168 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 40/105 (38%), Gaps = 3/105 (2%)
Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN 215
+ G+ LHS I +LKP N +L + + ++ GTP
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE 260
++APE E P+ E D W +L+G P G + E
Sbjct: 183 FVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 77/212 (36%), Gaps = 33/212 (15%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 17 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 68
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + M + L + Y L QG
Sbjct: 69 ------PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 122
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
+ HS +L +LKP N ++N L D + +P R T +
Sbjct: 123 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------GLARAFGVPVRTYTHEVVTL 174
Query: 220 EQWQPEV-RGPISFET--DSWGFACSIIEMLT 248
PE+ G + T D W C EM+T
Sbjct: 175 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 206
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 82/236 (34%), Gaps = 49/236 (20%)
Query: 33 DTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVK--------ILHPVK 84
+ W P L+ +G G +G V S D +VAVK ++H +
Sbjct: 20 NKTVWEVPQRLQGLRPVGSGAYGSV------CSAYDARLRQKVAVKKLSRPFQSLIHARR 73
Query: 85 EDRMRVLLERLN--------DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRM 136
R LL+ L D+F +E + ++ + G D
Sbjct: 74 TYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMG-------------ADLN 120
Query: 137 AQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXX 196
+K LS +V L +G+ +HS GI+ +LKP N +NE + D
Sbjct: 121 NIVKSQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDF----- 175
Query: 197 XXXXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ + T Y APE W + D W C + E+L G
Sbjct: 176 -GLARQADEEMTGYVATRWYRAPEIMLNWM-----HYNQTVDIWSVGCIMAELLQG 225
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 12/134 (8%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE-RLNDLFLKCQGVE 106
+IG G FGE+ L + + E VA+K L P+K ++ LE R G+
Sbjct: 16 KIGCGNFGELRLGKNLYTNE------YVAIK-LEPMKSRAPQLHLEYRFYKQLGSGDGIP 68
Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
+ + N + ++ G + + L SL V AI L + +HSK
Sbjct: 69 QVYYFGPCGKYNAMVLELL----GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK 124
Query: 167 GILVLNLKPFNFIL 180
++ ++KP NF++
Sbjct: 125 NLIYRDVKPENFLI 138
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 82/219 (37%), Gaps = 33/219 (15%)
Query: 45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL----------HPVKEDRMRVLLER 94
L +G G +GEV LA + ++ E VAVKI+ + KE + +L
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 95 LNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAI 154
N + EG + +G G + DR+ G + + R+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSG----------GELFDRIEPDIG--MPEPDAQRFFH 112
Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTP 214
L G++ LH GI ++KP N +L+E D + D L + GT
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTL 171
Query: 215 NYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 252
Y+APE + R E D W + ML G P
Sbjct: 172 PYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 82/219 (37%), Gaps = 33/219 (15%)
Query: 45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL----------HPVKEDRMRVLLER 94
L +G G +GEV LA + ++ E VAVKI+ + KE + +L
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 95 LNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAI 154
N + EG + +G G + DR+ G + + R+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSG----------GELFDRIEPDIG--MPEPDAQRFFH 112
Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTP 214
L G++ LH GI ++KP N +L+E D + D L + GT
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTL 171
Query: 215 NYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 252
Y+APE + R E D W + ML G P
Sbjct: 172 PYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 82/219 (37%), Gaps = 33/219 (15%)
Query: 45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL----------HPVKEDRMRVLLER 94
L +G G +GEV LA + ++ E VAVKI+ + KE + +L
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 95 LNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAI 154
N + EG + +G G + DR+ G + + R+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSG----------GELFDRIEPDIG--MPEPDAQRFFH 112
Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTP 214
L G++ LH GI ++KP N +L+E D + D L + GT
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTL 171
Query: 215 NYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 252
Y+APE + R E D W + ML G P
Sbjct: 172 PYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 12/134 (8%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE-RLNDLFLKCQGVE 106
+IG G FGE+ L + + E VA+K L P+K ++ LE R G+
Sbjct: 16 KIGCGNFGELRLGKNLYTNE------YVAIK-LEPMKSRAPQLHLEYRFYKQLGSGDGIP 68
Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
+ + N + ++ G + + L SL V AI L + +HSK
Sbjct: 69 QVYYFGPCGKYNAMVLELL----GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK 124
Query: 167 GILVLNLKPFNFIL 180
++ ++KP NF++
Sbjct: 125 NLIYRDVKPENFLI 138
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 75/212 (35%), Gaps = 33/212 (15%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 14 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 65
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + M + L + Y L QG
Sbjct: 66 ------PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 119
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
+ HS +L +LKP N ++N L D + +P R T +
Sbjct: 120 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------GLARAFGVPVRTYTHEVVTL 171
Query: 220 EQWQPEVR---GPISFETDSWGFACSIIEMLT 248
PE+ S D W C EM+T
Sbjct: 172 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 75/212 (35%), Gaps = 33/212 (15%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 10 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 61
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + M + L + Y L QG
Sbjct: 62 ------PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
+ HS +L +LKP N ++N L D + +P R T +
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------GLARAFGVPVRTYTHEVVTL 167
Query: 220 EQWQPEVR---GPISFETDSWGFACSIIEMLT 248
PE+ S D W C EM+T
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 12/134 (8%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLE-RLNDLFLKCQGVE 106
+IG G FGE+ L + + E VA+K L P+K ++ LE R G+
Sbjct: 37 KIGCGNFGELRLGKNLYTNE------YVAIK-LEPMKSRAPQLHLEYRFYKQLGSGDGIP 89
Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
+ + N + ++ G + + L SL V AI L + +HSK
Sbjct: 90 QVYYFGPCGKYNAMVLELL----GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK 145
Query: 167 GILVLNLKPFNFIL 180
++ ++KP NF++
Sbjct: 146 NLIYRDVKPENFLI 159
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 75/212 (35%), Gaps = 33/212 (15%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 9 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 60
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + M + L + Y L QG
Sbjct: 61 ------PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
+ HS +L +LKP N ++N L D + +P R T +
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------GLARAFGVPVRTYTHEVVTL 166
Query: 220 EQWQPEVR---GPISFETDSWGFACSIIEMLT 248
PE+ S D W C EM+T
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 82/219 (37%), Gaps = 33/219 (15%)
Query: 45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL----------HPVKEDRMRVLLER 94
L +G G +GEV LA + ++ E VAVKI+ + KE + +L
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 95 LNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAI 154
N + EG + +G G + DR+ G + + R+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSG----------GELFDRIEPDIG--MPEPDAQRFFH 111
Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTP 214
L G++ LH GI ++KP N +L+E D + D L + GT
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTL 170
Query: 215 NYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 252
Y+APE + R E D W + ML G P
Sbjct: 171 PYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 82/219 (37%), Gaps = 33/219 (15%)
Query: 45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL----------HPVKEDRMRVLLER 94
L +G G +GEV LA + ++ E VAVKI+ + KE + +L
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 95 LNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAI 154
N + EG + +G G + DR+ G + + R+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSG----------GELFDRIEPDIG--MPEPDAQRFFH 112
Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTP 214
L G++ LH GI ++KP N +L+E D + D L + GT
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTL 171
Query: 215 NYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 252
Y+APE + R E D W + ML G P
Sbjct: 172 PYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 219 PEQWQ-PEVRGPISF--ETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 274
P +W PE F ++D W F + E + G +P G E+ A++ + E
Sbjct: 171 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGC 229
Query: 275 PSGLPPAVENVLLGCFEYDLRSRP 298
P+G P + +++ C+ YD+ +RP
Sbjct: 230 PAGCPREMYDLMNLCWTYDVENRP 253
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 75/212 (35%), Gaps = 33/212 (15%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 11 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 62
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + M + L + Y L QG
Sbjct: 63 ------PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
+ HS +L +LKP N ++N L D + +P R T +
Sbjct: 117 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------GLARAFGVPVRTYTHEVVTL 168
Query: 220 EQWQPEVR---GPISFETDSWGFACSIIEMLT 248
PE+ S D W C EM+T
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 70/178 (39%), Gaps = 21/178 (11%)
Query: 154 IDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD---VXXXXXXXXXXXXSSDLPR- 209
+ +A+ + LHSKG++ +LKP N D +GD V + +P
Sbjct: 125 LQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 184
Query: 210 -----RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDA 264
++GT YM+PEQ S + D + + E+L + R V + D
Sbjct: 185 ARHTGQVGTKLYMSPEQIHG---NSYSHKVDIFSLGLILFELLYPFSTQMER-VRTLTD- 239
Query: 265 VVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTG 322
VR + PP+ + P ++ RP +I+ +N+V D + G
Sbjct: 240 -VRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINII------ENAVFEDLDFPG 290
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 18/159 (11%)
Query: 123 IIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE 182
++M F +G M K KL + + +G+ +H+ GI+ +LKP N +NE
Sbjct: 107 LVMPFMGTDLGKLM---KHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNE 163
Query: 183 ADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACS 242
+ D S++ + T Y APE +R + D W C
Sbjct: 164 DCELKILDF------GLARQADSEMXGXVVTRWYRAPEVILNWMR--YTQTVDIWSVGCI 215
Query: 243 IIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA 281
+ EM+T G+++ + D + + +EI + +G PPA
Sbjct: 216 MAEMIT------GKTLFKGSDHLDQLKEIMKV-TGTPPA 247
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 219 PEQWQ-PEVRGPISF--ETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 274
P +W PE F ++D W F + E + G +P G E+ A++ + E
Sbjct: 173 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGC 231
Query: 275 PSGLPPAVENVLLGCFEYDLRSRP 298
P+G P + +++ C+ YD+ +RP
Sbjct: 232 PAGCPREMYDLMNLCWTYDVENRP 255
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 75/212 (35%), Gaps = 33/212 (15%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 17 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 68
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + M + L + Y L QG
Sbjct: 69 ------PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 122
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
+ HS +L +LKP N ++N L D + +P R T +
Sbjct: 123 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------GLARAFGVPVRTYTHEVVTL 174
Query: 220 EQWQPEVR---GPISFETDSWGFACSIIEMLT 248
PE+ S D W C EM+T
Sbjct: 175 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 206
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 82/219 (37%), Gaps = 33/219 (15%)
Query: 45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL----------HPVKEDRMRVLLER 94
L +G G +GEV LA + ++ E VAVKI+ + KE + +L
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 95 LNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAI 154
N + EG + +G G + DR+ G + + R+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSG----------GELFDRIEPDIG--MPEPDAQRFFH 112
Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTP 214
L G++ LH GI ++KP N +L+E D + D L + GT
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTL 171
Query: 215 NYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 252
Y+APE + R E D W + ML G P
Sbjct: 172 PYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 82/219 (37%), Gaps = 33/219 (15%)
Query: 45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL----------HPVKEDRMRVLLER 94
L +G G +GEV LA + ++ E VAVKI+ + KE + +L
Sbjct: 9 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENIKKEICINKMLNH 62
Query: 95 LNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAI 154
N + EG + +G G + DR+ G + + R+
Sbjct: 63 ENVVKFYGHRREGNIQYLFLEYCSG----------GELFDRIEPDIG--MPEPDAQRFFH 110
Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTP 214
L G++ LH GI ++KP N +L+E D + D L + GT
Sbjct: 111 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTL 169
Query: 215 NYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 252
Y+APE + R E D W + ML G P
Sbjct: 170 PYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 82/219 (37%), Gaps = 33/219 (15%)
Query: 45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL----------HPVKEDRMRVLLER 94
L +G G +GEV LA + ++ E VAVKI+ + KE + +L
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 95 LNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAI 154
N + EG + +G G + DR+ G + + R+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSG----------GELFDRIEPDIG--MPEPDAQRFFH 111
Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTP 214
L G++ LH GI ++KP N +L+E D + D L + GT
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTL 170
Query: 215 NYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 252
Y+APE + R E D W + ML G P
Sbjct: 171 PYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 72/183 (39%), Gaps = 22/183 (12%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
+G+G +GEVW + + VAVKI E E N + L+ + + G
Sbjct: 45 VGKGRYGEVWRGSW--------QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGF 96
Query: 109 CWLQGISVING-KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK- 166
S + ++ +I ++E +G L+ L + R + +A G+ LH +
Sbjct: 97 IASDMTSRHSSTQLWLITHYHE--MGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEI 154
Query: 167 -------GILVLNLKPFNFILNEADRAVLGD--VXXXXXXXXXXXXSSDLPRRLGTPNYM 217
I +LK N ++ + + + D + + P R+GT YM
Sbjct: 155 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNP-RVGTKRYM 213
Query: 218 APE 220
APE
Sbjct: 214 APE 216
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 75/212 (35%), Gaps = 33/212 (15%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 10 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 61
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + M + L + Y L QG
Sbjct: 62 ------PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
+ HS +L +LKP N ++N L D + +P R T +
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------GLARAFGVPVRTYTHEVVTL 167
Query: 220 EQWQPEVR---GPISFETDSWGFACSIIEMLT 248
PE+ S D W C EM+T
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 75/212 (35%), Gaps = 33/212 (15%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 9 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 60
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + M + L + Y L QG
Sbjct: 61 ------PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
+ HS +L +LKP N ++N L D + +P R T +
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------GLARAFGVPVRTYTHEVVTL 166
Query: 220 EQWQPEVR---GPISFETDSWGFACSIIEMLT 248
PE+ S D W C EM+T
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 82/219 (37%), Gaps = 33/219 (15%)
Query: 45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL----------HPVKEDRMRVLLER 94
L +G G +GEV LA + ++ E VAVKI+ + KE + +L
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 95 LNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAI 154
N + EG + +G G + DR+ G + + R+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSG----------GELFDRIEPDIG--MPEPDAQRFFH 111
Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTP 214
L G++ LH GI ++KP N +L+E D + D L + GT
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTL 170
Query: 215 NYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 252
Y+APE + R E D W + ML G P
Sbjct: 171 PYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 82/219 (37%), Gaps = 33/219 (15%)
Query: 45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL----------HPVKEDRMRVLLER 94
L +G G +GEV LA + ++ E VAVKI+ + KE + +L
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 95 LNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAI 154
N + EG + +G G + DR+ G + + R+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSG----------GELFDRIEPDIG--MPEPDAQRFFH 111
Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTP 214
L G++ LH GI ++KP N +L+E D + D L + GT
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTL 170
Query: 215 NYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 252
Y+APE + R E D W + ML G P
Sbjct: 171 PYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 82/219 (37%), Gaps = 33/219 (15%)
Query: 45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL----------HPVKEDRMRVLLER 94
L +G G +GEV LA + ++ E VAVKI+ + KE + +L
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 95 LNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAI 154
N + EG + +G G + DR+ G + + R+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSG----------GELFDRIEPDIG--MPEPDAQRFFH 111
Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTP 214
L G++ LH GI ++KP N +L+E D + D L + GT
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMXGTL 170
Query: 215 NYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 252
Y+APE + R E D W + ML G P
Sbjct: 171 PYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 40/105 (38%), Gaps = 3/105 (2%)
Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN 215
+ G+ LHS I +LKP N +L + + ++ GTP
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPA 182
Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE 260
++APE E P+ E D W +L+G P G + E
Sbjct: 183 FVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 219 PEQWQ-PEVRGPISF--ETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 274
P +W PE F ++D W F + E + G +P G E+ A++ + E
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGC 235
Query: 275 PSGLPPAVENVLLGCFEYDLRSRP 298
P+G P + +++ C+ YD+ +RP
Sbjct: 236 PAGCPREMYDLMNLCWTYDVENRP 259
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 77/222 (34%), Gaps = 53/222 (23%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 13 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 64
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + M + L + Y L QG
Sbjct: 65 ------PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN---- 215
+ HS +L +LKP N ++N L D L R G P
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------------GLARAFGVPVRTYX 164
Query: 216 -------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 248
Y APE + G + T D W C EM+T
Sbjct: 165 HEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 219 PEQW-QPEVRGPISF--ETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 274
P +W PE F ++D W F + E + G +P G E+ A++ + E
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGC 235
Query: 275 PSGLPPAVENVLLGCFEYDLRSRP 298
P+G P + +++ C+ YD+ +RP
Sbjct: 236 PAGCPREMYDLMNLCWTYDVENRP 259
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL-GTP 214
+ + I HS GI+ NLKP N +L A +A V S+ GTP
Sbjct: 113 ILESIAYCHSNGIVHRNLKPENLLL--ASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP 170
Query: 215 NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
Y++PE + + P S D W + +L G P
Sbjct: 171 GYLSPEVLK---KDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 72/183 (39%), Gaps = 22/183 (12%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
+G+G +GEVW + + VAVKI E E N + L+ + + G
Sbjct: 16 VGKGRYGEVWRGSW--------QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGF 67
Query: 109 CWLQGISVING-KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK- 166
S + ++ +I ++E +G L+ L + R + +A G+ LH +
Sbjct: 68 IASDMTSRHSSTQLWLITHYHE--MGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 167 -------GILVLNLKPFNFILNEADRAVLGD--VXXXXXXXXXXXXSSDLPRRLGTPNYM 217
I +LK N ++ + + + D + + P R+GT YM
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNP-RVGTKRYM 184
Query: 218 APE 220
APE
Sbjct: 185 APE 187
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 82/219 (37%), Gaps = 33/219 (15%)
Query: 45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL----------HPVKEDRMRVLLER 94
L +G G +GEV LA + ++ E VAVKI+ + KE + +L
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 95 LNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAI 154
N + EG + +G G + DR+ G + + R+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSG----------GELFDRIEPDIG--MPEPDAQRFFH 111
Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTP 214
L G++ LH GI ++KP N +L+E D + D L + GT
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMXGTL 170
Query: 215 NYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 252
Y+APE + R E D W + ML G P
Sbjct: 171 PYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 72/183 (39%), Gaps = 22/183 (12%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
+G+G +GEVW + + VAVKI E E N + L+ + + G
Sbjct: 16 VGKGRYGEVWRGSW--------QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGF 67
Query: 109 CWLQGISVING-KICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK- 166
S + ++ +I ++E +G L+ L + R + +A G+ LH +
Sbjct: 68 IASDMTSRHSSTQLWLITHYHE--MGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 167 -------GILVLNLKPFNFILNEADRAVLGD--VXXXXXXXXXXXXSSDLPRRLGTPNYM 217
I +LK N ++ + + + D + + P R+GT YM
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNP-RVGTKRYM 184
Query: 218 APE 220
APE
Sbjct: 185 APE 187
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 77/222 (34%), Gaps = 53/222 (23%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 12 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 63
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + M + L + Y L QG
Sbjct: 64 ------PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN---- 215
+ HS +L +LKP N ++N L D L R G P
Sbjct: 118 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------------GLARAFGVPVRTYX 163
Query: 216 -------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 248
Y APE + G + T D W C EM+T
Sbjct: 164 HEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 210 RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR 267
R+GTP++MAPE + R P D WG + +L+G P G + + +++ +++
Sbjct: 195 RVGTPHFMAPEVVK---REPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIK 248
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 210 RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR 267
R+GTP++MAPE + R P D WG + +L+G P G + + +++ +++
Sbjct: 193 RVGTPHFMAPEVVK---REPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIK 246
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 77/222 (34%), Gaps = 53/222 (23%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 13 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 64
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + M + L + Y L QG
Sbjct: 65 ------PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN---- 215
+ HS +L +LKP N ++N L D L R G P
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------------GLARAFGVPVRTYX 164
Query: 216 -------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 248
Y APE + G + T D W C EM+T
Sbjct: 165 HEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 77/222 (34%), Gaps = 53/222 (23%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 12 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 63
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + M + L + Y L QG
Sbjct: 64 ------PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN---- 215
+ HS +L +LKP N ++N L D L R G P
Sbjct: 118 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------------GLARAFGVPVRTYX 163
Query: 216 -------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 248
Y APE + G + T D W C EM+T
Sbjct: 164 HEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 82/219 (37%), Gaps = 33/219 (15%)
Query: 45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL----------HPVKEDRMRVLLER 94
L +G G +GEV LA + ++ E VAVKI+ + KE + +L
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 95 LNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAI 154
N + EG + +G G + DR+ G + + R+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSG----------GELFDRIEPDIG--MPEPDAQRFFH 111
Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTP 214
L G++ LH GI ++KP N +L+E D + D L + GT
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTL 170
Query: 215 NYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 252
Y+APE + R E D W + ML G P
Sbjct: 171 PYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 82/219 (37%), Gaps = 33/219 (15%)
Query: 45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL----------HPVKEDRMRVLLER 94
L +G G +GEV LA + ++ E VAVKI+ + KE + +L
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 95 LNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAI 154
N + EG + +G G + DR+ G + + R+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSG----------GELFDRIEPDIG--MPEPDAQRFFH 111
Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTP 214
L G++ LH GI ++KP N +L+E D + D L + GT
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTL 170
Query: 215 NYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 252
Y+APE + R E D W + ML G P
Sbjct: 171 PYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL-GTP 214
+ + I HS GI+ NLKP N +L A +A V S+ GTP
Sbjct: 114 ILESIAYCHSNGIVHRNLKPENLLL--ASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP 171
Query: 215 NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
Y++PE + + P S D W + +L G P
Sbjct: 172 GYLSPEVLK---KDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 77/222 (34%), Gaps = 53/222 (23%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 12 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 63
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + M + L + Y L QG
Sbjct: 64 ------PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN---- 215
+ HS +L +LKP N ++N L D L R G P
Sbjct: 118 LAFCHSHRVLHRDLKPENLLINTEGAIKLADF--------------GLARAFGVPVRTYX 163
Query: 216 -------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 248
Y APE + G + T D W C EM+T
Sbjct: 164 HEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 77/222 (34%), Gaps = 53/222 (23%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 11 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 62
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + M + L + Y L QG
Sbjct: 63 ------PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN---- 215
+ HS +L +LKP N ++N L D L R G P
Sbjct: 117 LAFCHSHRVLHRDLKPENLLINTEGAIKLADF--------------GLARAFGVPVRTYX 162
Query: 216 -------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 248
Y APE + G + T D W C EM+T
Sbjct: 163 HEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 77/222 (34%), Gaps = 53/222 (23%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 9 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 60
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + M + L + Y L QG
Sbjct: 61 ------PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN---- 215
+ HS +L +LKP N ++N L D L R G P
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------------GLARAFGVPVRTYX 160
Query: 216 -------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 248
Y APE + G + T D W C EM+T
Sbjct: 161 HEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 219 PEQWQ-PEVRGPISF--ETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 274
P +W PE F ++D W F + E + G +P G E+ A++ + E
Sbjct: 183 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGC 241
Query: 275 PSGLPPAVENVLLGCFEYDLRSRP 298
P+G P + +++ C+ YD+ +RP
Sbjct: 242 PAGCPREMYDLMNLCWTYDVENRP 265
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 77/222 (34%), Gaps = 53/222 (23%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 11 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 62
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + M + L + Y L QG
Sbjct: 63 ------PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN---- 215
+ HS +L +LKP N ++N L D L R G P
Sbjct: 117 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------------GLARAFGVPVRTYX 162
Query: 216 -------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 248
Y APE + G + T D W C EM+T
Sbjct: 163 HEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 77/222 (34%), Gaps = 53/222 (23%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 11 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 62
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + M + L + Y L QG
Sbjct: 63 ------PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN---- 215
+ HS +L +LKP N ++N L D L R G P
Sbjct: 117 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------------GLARAFGVPVRTYX 162
Query: 216 -------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 248
Y APE + G + T D W C EM+T
Sbjct: 163 HEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 77/222 (34%), Gaps = 53/222 (23%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 10 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 61
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + M + L + Y L QG
Sbjct: 62 ------PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN---- 215
+ HS +L +LKP N ++N L D L R G P
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------------GLARAFGVPVRTYX 161
Query: 216 -------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 248
Y APE + G + T D W C EM+T
Sbjct: 162 HEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL-GTP 214
+ + I HS GI+ NLKP N +L A +A V S+ GTP
Sbjct: 114 ILESIAYCHSNGIVHRNLKPENLLL--ASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP 171
Query: 215 NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
Y++PE + + P S D W + +L G P
Sbjct: 172 GYLSPEVLK---KDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 82/219 (37%), Gaps = 33/219 (15%)
Query: 45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL----------HPVKEDRMRVLLER 94
L +G G +GEV LA + ++ E VAVKI+ + KE + +L
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 95 LNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAI 154
N + EG + +G G + DR+ G + + R+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSG----------GELFDRIEPDIG--MPEPDAQRFFH 111
Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTP 214
L G++ LH GI ++KP N +L+E D + D L + GT
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMXGTL 170
Query: 215 NYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 252
Y+APE + R E D W + ML G P
Sbjct: 171 PYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 77/222 (34%), Gaps = 53/222 (23%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 13 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 64
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + M + L + Y L QG
Sbjct: 65 ------PNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN---- 215
+ HS +L +LKP N ++N L D L R G P
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------------GLARAFGVPVRTYX 164
Query: 216 -------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 248
Y APE + G + T D W C EM+T
Sbjct: 165 HEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 77/222 (34%), Gaps = 53/222 (23%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 10 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 61
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + M + L + Y L QG
Sbjct: 62 ------PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN---- 215
+ HS +L +LKP N ++N L D L R G P
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------------GLARAFGVPVRTYX 161
Query: 216 -------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 248
Y APE + G + T D W C EM+T
Sbjct: 162 HEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 77/222 (34%), Gaps = 53/222 (23%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 14 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 65
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + M + L + Y L QG
Sbjct: 66 ------PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 119
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN---- 215
+ HS +L +LKP N ++N L D L R G P
Sbjct: 120 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------------GLARAFGVPVRTYX 165
Query: 216 -------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 248
Y APE + G + T D W C EM+T
Sbjct: 166 HEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 82/236 (34%), Gaps = 49/236 (20%)
Query: 33 DTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVK--------ILHPVK 84
+ W P L+ +G G +G V S D +VAVK ++H +
Sbjct: 20 NKTVWEVPQRLQGLRPVGSGAYGSV------CSAYDARLRQKVAVKKLSRPFQSLIHARR 73
Query: 85 EDRMRVLLERLN--------DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRM 136
R LL+ L D+F +E + ++ + G D
Sbjct: 74 TYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMG-------------ADLN 120
Query: 137 AQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXX 196
+K LS +V L +G+ +HS GI+ +LKP N +NE + D
Sbjct: 121 NIVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDF----- 175
Query: 197 XXXXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ + T Y APE W + D W C + E+L G
Sbjct: 176 -GLARQADEEMTGYVATRWYRAPEIMLNWM-----HYNQTVDIWSVGCIMAELLQG 225
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 82/219 (37%), Gaps = 33/219 (15%)
Query: 45 LRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL----------HPVKEDRMRVLLER 94
L +G G +GEV LA + ++ E VAVKI+ + KE + +L
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEE------AVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 95 LNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAI 154
N + EG + +G G + DR+ G + + R+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSG----------GELFDRIEPDIG--MPEPDAQRFFH 112
Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTP 214
L G++ LH GI ++KP N +L+E D + D L + GT
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKMCGTL 171
Query: 215 NYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 252
Y+APE + R E D W + ML G P
Sbjct: 172 PYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 77/222 (34%), Gaps = 53/222 (23%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 10 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 61
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + M + L + Y L QG
Sbjct: 62 ------PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN---- 215
+ HS +L +LKP N ++N L D L R G P
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------------GLARAFGVPVRTYX 161
Query: 216 -------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 248
Y APE + G + T D W C EM+T
Sbjct: 162 HEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 75/212 (35%), Gaps = 33/212 (15%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 10 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 61
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + M + L + Y L QG
Sbjct: 62 ------PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
+ HS +L +LKP N ++N L D + +P R T +
Sbjct: 116 LSFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------GLARAFGVPVRTYTHEVVTL 167
Query: 220 EQWQPEVR---GPISFETDSWGFACSIIEMLT 248
PE+ S D W C EM+T
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 151 RYAIDLAQGILQLHSK---GILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDL 207
R A+ A+G+ LH I+ ++K N +L+E AV+GD
Sbjct: 135 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA 194
Query: 208 PRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 249
R G ++APE G S +TD +G+ ++E++TG
Sbjct: 195 VR--GXIGHIAPEYLST---GKSSEKTDVFGYGVMLLELITG 231
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 93/221 (42%), Gaps = 40/221 (18%)
Query: 35 NAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK-------EDR 87
N + + L+L RG FG VW A + +EY VAVKI P++ E
Sbjct: 18 NLYFQSMPLQLLEVKARGRFGCVWKA------QLLNEY--VAVKIF-PIQDKQSWQNEYE 68
Query: 88 MRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSL 146
+ L ++ L+ G E +G SV + + +I F+E GS+ D LK +S
Sbjct: 69 VYSLPGMKHENILQFIGAEK----RGTSV-DVDLWLITAFHEKGSLSDF---LKANVVSW 120
Query: 147 SNVFRYAIDLAQGILQLHSK----------GILVLNLKPFNFILNEADRAVLGDVXXXXX 196
+ + A +A+G+ LH I ++K N +L A + D
Sbjct: 121 NELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK 180
Query: 197 XXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSW 237
+ D ++GT YMAPE + G I+F+ D++
Sbjct: 181 FEAGKS-AGDTHGQVGTRRYMAPEV----LEGAINFQRDAF 216
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 77/222 (34%), Gaps = 53/222 (23%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 10 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 61
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + M + L + Y L QG
Sbjct: 62 ------PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN---- 215
+ HS +L +LKP N ++N L D L R G P
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------------GLARAFGVPVRTYX 161
Query: 216 -------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 248
Y APE + G + T D W C EM+T
Sbjct: 162 HEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
R+ L G++ LH GI ++KP N +L+E D + D L +
Sbjct: 108 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL-LNKM 166
Query: 211 LGTPNYMAPEQWQPEVRGPISFE-TDSWGFACSIIEMLTGVQP 252
GT Y+APE + R E D W + ML G P
Sbjct: 167 CGTLPYVAPELLK---RREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 77/222 (34%), Gaps = 53/222 (23%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 9 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 60
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + M + L + Y L QG
Sbjct: 61 ------PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN---- 215
+ HS +L +LKP N ++N L D L R G P
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------------GLARAFGVPVRTYX 160
Query: 216 -------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 248
Y APE + G + T D W C EM+T
Sbjct: 161 HEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 219 PEQW-QPEVRGPISF--ETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 274
P +W PE F ++D W F + E + G +P G E+ A++ + E
Sbjct: 191 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGC 249
Query: 275 PSGLPPAVENVLLGCFEYDLRSRP 298
P+G P + +++ C+ YD+ +RP
Sbjct: 250 PAGCPREMYDLMNLCWTYDVENRP 273
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 13/141 (9%)
Query: 42 ALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLER--LNDLF 99
++++ +IG G FGE+ L + + E VA+K L P+K ++ LE L
Sbjct: 1 SMRVGKKIGCGNFGELRLGKNLYTNE------YVAIK-LEPIKSRAPQLHLEYRFYKQLG 53
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
+G+ + + N + ++ G + + L +L V AI L
Sbjct: 54 SAGEGLPQVYYFGPXGKYNAMVLELL----GPSLEDLFDLCDRTFTLKTVLMIAIQLLSR 109
Query: 160 ILQLHSKGILVLNLKPFNFIL 180
+ +HSK ++ ++KP NF++
Sbjct: 110 MEYVHSKNLIYRDVKPENFLI 130
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL-GTP 214
+ + I HS GI+ NLKP N +L A +A V S+ GTP
Sbjct: 137 ILESIAYCHSNGIVHRNLKPENLLL--ASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP 194
Query: 215 NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
Y++PE + + P S D W + +L G P
Sbjct: 195 GYLSPEVLK---KDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 77/222 (34%), Gaps = 53/222 (23%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 13 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 64
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + M + L + Y L QG
Sbjct: 65 ------PNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN---- 215
+ HS +L +LKP N ++N L D L R G P
Sbjct: 119 LAFCHSHRVLHRDLKPENLLINTEGAIKLADF--------------GLARAFGVPVRTYX 164
Query: 216 -------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 248
Y APE + G + T D W C EM+T
Sbjct: 165 HEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 77/222 (34%), Gaps = 53/222 (23%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 11 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 62
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + M + L + Y L QG
Sbjct: 63 ------PNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN---- 215
+ HS +L +LKP N ++N L D L R G P
Sbjct: 117 LAFCHSHRVLHRDLKPENLLINTEGAIKLADF--------------GLARAFGVPVRTYX 162
Query: 216 -------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 248
Y APE + G + T D W C EM+T
Sbjct: 163 HEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 219 PEQWQ-PEVRGPISF--ETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 274
P +W PE F ++D W F + E + G +P G E+ A++ + E
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGC 251
Query: 275 PSGLPPAVENVLLGCFEYDLRSRP 298
P+G P + +++ C+ YD+ +RP
Sbjct: 252 PAGCPREMYDLMNLCWTYDVENRP 275
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 219 PEQWQ-PEVRGPISF--ETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 274
P +W PE F ++D W F + E + G +P G E+ A++ + E
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGC 251
Query: 275 PSGLPPAVENVLLGCFEYDLRSRP 298
P+G P + +++ C+ YD+ +RP
Sbjct: 252 PAGCPREMYDLMNLCWTYDVENRP 275
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 230 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 288
S ++D W F + E + G +P G E+ A++ + E P+G P + +++
Sbjct: 549 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGCPAGCPREMYDLMNL 607
Query: 289 CFEYDLRSRP 298
C+ YD+ +RP
Sbjct: 608 CWTYDVENRP 617
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 230 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 288
S ++D W F + E + G +P G E+ A++ + E P+G P + +++
Sbjct: 550 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGCPAGCPREMYDLMNL 608
Query: 289 CFEYDLRSRP 298
C+ YD+ +RP
Sbjct: 609 CWTYDVENRP 618
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 60/157 (38%), Gaps = 23/157 (14%)
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
Y ++ + LH GI+ ++K N +L+ VL D +D R
Sbjct: 164 YVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV------ADETERA 217
Query: 212 ----GTPNYMAPEQWQPEVRGPISFE---TDSWGFACSIIEMLTGVQPRC----GRSVDE 260
GT YMAP+ VRG S D W + E+LTG P S E
Sbjct: 218 YDFCGTIEYMAPDI----VRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAE 273
Query: 261 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 297
I +++ + PP P + ++++ D + R
Sbjct: 274 ISRRILKSE--PPYPQEMSALAKDLIQRLLMKDPKKR 308
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 79/222 (35%), Gaps = 22/222 (9%)
Query: 33 DTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLL 92
+ AW P +G G +G V A S E +VA+K L + +
Sbjct: 16 NKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGE------KVAIKKLSRPFQSEIFAKR 69
Query: 93 ERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVF 150
L LK E + L + + FY + + ++ G K S +
Sbjct: 70 AYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQ 129
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
+ +G+ +HS G++ +LKP N +NE + D +++
Sbjct: 130 YLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDF------GLARHADAEMTGY 183
Query: 211 LGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ T Y APE W + D W C + EMLTG
Sbjct: 184 VVTRWYRAPEVILSWMHYNQT-----VDIWSVGCIMAEMLTG 220
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 70/165 (42%), Gaps = 17/165 (10%)
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
Y ++ + + +H GI+ +LKP NF++ + ++ D ++
Sbjct: 113 YWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKD--SQV 170
Query: 212 GTPNYMAPEQWQP--------EVRGPISFETDSWGFACSIIEMLTGVQP--RCGRSVDEI 261
GT NYM PE + + + IS ++D W C + M G P + + ++
Sbjct: 171 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 230
Query: 262 YDAVVRRQEI--PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
+ + EI P IP +++VL C + D + R + ++L
Sbjct: 231 HAIIDPNHEIEFPDIPE---KDLQDVLKCCLKRDPKQRISIPELL 272
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 87/219 (39%), Gaps = 15/219 (6%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEG 107
++G G +GEV+ A ++ E VA+K + E+ LK
Sbjct: 41 KLGEGTYGEVYKAIDTVTNE------TVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRN 94
Query: 108 ICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG 167
I L+ + N ++ +I ++ E + M K +S+ + + L G+ HS+
Sbjct: 95 IIELKSVIHHNHRLHLIFEYAENDLKKYMD--KNPDVSMRVIKSFLYQLINGVNFCHSRR 152
Query: 168 ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEV- 226
L +LKP N +L+ +D + + + +P R T + PE+
Sbjct: 153 CLHRDLKPQNLLLSVSDAS---ETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEIL 209
Query: 227 RGPISFET--DSWGFACSIIEMLTGVQPRCGRS-VDEIY 262
G + T D W AC EML G S +D+++
Sbjct: 210 LGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLF 248
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 70/165 (42%), Gaps = 17/165 (10%)
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
Y ++ + + +H GI+ +LKP NF++ + ++ D ++
Sbjct: 160 YWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKD--SQV 217
Query: 212 GTPNYMAPEQWQP--------EVRGPISFETDSWGFACSIIEMLTGVQP--RCGRSVDEI 261
GT NYM PE + + + IS ++D W C + M G P + + ++
Sbjct: 218 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 277
Query: 262 YDAVVRRQEI--PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
+ + EI P IP +++VL C + D + R + ++L
Sbjct: 278 HAIIDPNHEIEFPDIPE---KDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 70/165 (42%), Gaps = 17/165 (10%)
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
Y ++ + + +H GI+ +LKP NF++ + ++ D ++
Sbjct: 112 YWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKD--SQV 169
Query: 212 GTPNYMAPEQWQP--------EVRGPISFETDSWGFACSIIEMLTGVQP--RCGRSVDEI 261
GT NYM PE + + + IS ++D W C + M G P + + ++
Sbjct: 170 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 229
Query: 262 YDAVVRRQEI--PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
+ + EI P IP +++VL C + D + R + ++L
Sbjct: 230 HAIIDPNHEIEFPDIPEK---DLQDVLKCCLKRDPKQRISIPELL 271
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 70/165 (42%), Gaps = 17/165 (10%)
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
Y ++ + + +H GI+ +LKP NF++ + ++ D ++
Sbjct: 160 YWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKD--SQV 217
Query: 212 GTPNYMAPEQWQP--------EVRGPISFETDSWGFACSIIEMLTGVQP--RCGRSVDEI 261
GT NYM PE + + + IS ++D W C + M G P + + ++
Sbjct: 218 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 277
Query: 262 YDAVVRRQEI--PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
+ + EI P IP +++VL C + D + R + ++L
Sbjct: 278 HAIIDPNHEIEFPDIPEK---DLQDVLKCCLKRDPKQRISIPELL 319
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 82/236 (34%), Gaps = 49/236 (20%)
Query: 33 DTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVK--------ILHPVK 84
+ W P L+ +G G +G V S D +VAVK ++H +
Sbjct: 12 NKTVWEVPQRLQGLRPVGSGAYGSV------CSAYDARLRQKVAVKKLSRPFQSLIHARR 65
Query: 85 EDRMRVLLERLN--------DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRM 136
R LL+ L D+F +E + ++ + G D
Sbjct: 66 TYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMG-------------ADLN 112
Query: 137 AQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXX 196
+K LS +V L +G+ +HS GI+ +LKP N +NE + D
Sbjct: 113 NIVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDF----- 167
Query: 197 XXXXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ + T Y APE W + D W C + E+L G
Sbjct: 168 -GLARQADEEMTGYVATRWYRAPEIMLNWM-----HYNQTVDIWSVGCIMAELLQG 217
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 70/165 (42%), Gaps = 17/165 (10%)
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
Y ++ + + +H GI+ +LKP NF++ + ++ D ++
Sbjct: 132 YWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKD--SQV 189
Query: 212 GTPNYMAPEQWQP--------EVRGPISFETDSWGFACSIIEMLTGVQP--RCGRSVDEI 261
GT NYM PE + + + IS ++D W C + M G P + + ++
Sbjct: 190 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 249
Query: 262 YDAVVRRQEI--PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
+ + EI P IP +++VL C + D + R + ++L
Sbjct: 250 HAIIDPNHEIEFPDIPEK---DLQDVLKCCLKRDPKQRISIPELL 291
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 70/165 (42%), Gaps = 17/165 (10%)
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
Y ++ + + +H GI+ +LKP NF++ + ++ D ++
Sbjct: 116 YWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKD--SQV 173
Query: 212 GTPNYMAPEQWQP--------EVRGPISFETDSWGFACSIIEMLTGVQP--RCGRSVDEI 261
GT NYM PE + + + IS ++D W C + M G P + + ++
Sbjct: 174 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 233
Query: 262 YDAVVRRQEI--PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
+ + EI P IP +++VL C + D + R + ++L
Sbjct: 234 HAIIDPNHEIEFPDIPEK---DLQDVLKCCLKRDPKQRISIPELL 275
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 144 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD 190
L+L +V + L +G+ +HS ++ +LKP N ++NE +GD
Sbjct: 156 LTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGD 202
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 83/211 (39%), Gaps = 20/211 (9%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVK--ILHPVKEDRMRVLLERLNDL-FLKCQG 104
+IG+G FGEV+ A H + + +VA+K ++ KE L + L LK +
Sbjct: 25 KIGQGTFGEVFKARHRKTGQ------KVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 105 VEG---ICWLQG--ISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
V IC + + G I ++ F E + ++ + K +LS + R L G
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-VKFTLSEIKRVMQMLLNG 137
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSD-LPRRLGTPNYMA 218
+ +H IL ++K N ++ L D + R+ T Y
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 219 PEQWQPEV-RGPISFETDSWGFACSIIEMLT 248
PE E GP D WG C + EM T
Sbjct: 198 PELLLGERDYGP---PIDLWGAGCIMAEMWT 225
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 81/217 (37%), Gaps = 27/217 (12%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKI-------LHPVKEDRMRVLLERLNDLFLK 101
IGRG V H + HE AVKI L P + + +R R + +
Sbjct: 102 IGRGVSSVVRRCVHRATG------HEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 102 CQGVEGICWLQGISVINGKICIIMKFY-EGSVGDRMAQLKGGKLSLSNVFRYAI--DLAQ 158
G I L + + ++ +G + D + + K++LS +I L +
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE----KVALSEKETRSIMRSLLE 211
Query: 159 GILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMA 218
+ LH+ I+ +LKP N +L++ + L D L GTP Y+A
Sbjct: 212 AVSFLHANNIVHRDLKPENILLDDNMQIRLSDF----GFSCHLEPGEKLRELCGTPGYLA 267
Query: 219 PEQWQ---PEVRGPISFETDSWGFACSIIEMLTGVQP 252
PE + E E D W + +L G P
Sbjct: 268 PEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 79/222 (35%), Gaps = 22/222 (9%)
Query: 33 DTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLL 92
+ AW P +G G +G V A S E +VA+K L + +
Sbjct: 34 NKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGE------KVAIKKLSRPFQSEIFAKR 87
Query: 93 ERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFY--EGSVGDRMAQLKGGKLSLSNVF 150
L LK E + L + + FY + + ++ G + S +
Sbjct: 88 AYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQ 147
Query: 151 RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 210
+ +G+ +HS G++ +LKP N +NE + D +++
Sbjct: 148 YLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDF------GLARHADAEMTGY 201
Query: 211 LGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ T Y APE W + D W C + EMLTG
Sbjct: 202 VVTRWYRAPEVILSWMHYNQT-----VDIWSVGCIMAEMLTG 238
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 74/212 (34%), Gaps = 33/212 (15%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+ + P R LL+ LN
Sbjct: 10 KIGEGTYGVVYKARNKLTGE------VVALXKIRLDTETEGVPSTAIREISLLKELNH-- 61
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + M + L + Y L QG
Sbjct: 62 ------PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
+ HS +L +LKP N ++N L D + +P R T +
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------GLARAFGVPVRTYTHEVVTL 167
Query: 220 EQWQPEVR---GPISFETDSWGFACSIIEMLT 248
PE+ S D W C EM+T
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 74/212 (34%), Gaps = 33/212 (15%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+ + P R LL+ LN
Sbjct: 9 KIGEGTYGVVYKARNKLTGE------VVALXKIRLDTETEGVPSTAIREISLLKELNH-- 60
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ +F + M + L + Y L QG
Sbjct: 61 ------PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
+ HS +L +LKP N ++N L D + +P R T +
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------GLARAFGVPVRTYTHEVVTL 166
Query: 220 EQWQPEVR---GPISFETDSWGFACSIIEMLT 248
PE+ S D W C EM+T
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 144 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD 190
L+L +V + L +G+ +HS ++ +LKP N ++NE +GD
Sbjct: 155 LTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGD 201
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 83/211 (39%), Gaps = 20/211 (9%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVK--ILHPVKEDRMRVLLERLNDL-FLKCQG 104
+IG+G FGEV+ A H + + +VA+K ++ KE L + L LK +
Sbjct: 25 KIGQGTFGEVFKARHRKTGQ------KVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 105 VEG---ICWLQG--ISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
V IC + + G I ++ F E + ++ + K +LS + R L G
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-VKFTLSEIKRVMQMLLNG 137
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSD-LPRRLGTPNYMA 218
+ +H IL ++K N ++ L D + R+ T Y
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 219 PEQWQPEV-RGPISFETDSWGFACSIIEMLT 248
PE E GP D WG C + EM T
Sbjct: 198 PELLLGERDYGP---PIDLWGAGCIMAEMWT 225
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 83/211 (39%), Gaps = 20/211 (9%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVK--ILHPVKEDRMRVLLERLNDL-FLKCQG 104
+IG+G FGEV+ A H + + +VA+K ++ KE L + L LK +
Sbjct: 24 KIGQGTFGEVFKARHRKTGQ------KVALKKVLMENEKEGFPITALREIKILQLLKHEN 77
Query: 105 VEG---ICWLQG--ISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
V IC + + G I ++ F E + ++ + K +LS + R L G
Sbjct: 78 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-VKFTLSEIKRVMQMLLNG 136
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSD-LPRRLGTPNYMA 218
+ +H IL ++K N ++ L D + R+ T Y
Sbjct: 137 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 196
Query: 219 PEQWQPEV-RGPISFETDSWGFACSIIEMLT 248
PE E GP D WG C + EM T
Sbjct: 197 PELLLGERDYGP---PIDLWGAGCIMAEMWT 224
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
Y ++ + + +H GI+ +LKP NF++ + ++ D ++
Sbjct: 132 YWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDXXXVVKD--SQV 189
Query: 212 GTPNYMAPEQWQP--------EVRGPISFETDSWGFACSIIEMLTGVQP--RCGRSVDEI 261
GT NYM PE + + + IS ++D W C + M G P + + ++
Sbjct: 190 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 249
Query: 262 YDAVVRRQEI--PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
+ + EI P IP +++VL C + D + R + ++L
Sbjct: 250 HAIIDPNHEIEFPDIPEK---DLQDVLKCCLKRDPKQRISIPELL 291
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 21/146 (14%)
Query: 139 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 198
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 146 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 199
Query: 199 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG 255
++ + T Y APE W + D W C + E+LT G
Sbjct: 200 LARHTDDEMTGYVATRWYRAPEIMLNWM-----HYNMTVDIWSVGCIMAELLT------G 248
Query: 256 RSVDEIYDAVVRRQEIPPIPSGLPPA 281
R++ D + + Q+I + +G PPA
Sbjct: 249 RTLFPGTDHINQLQQIMRL-TGTPPA 273
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 9/144 (6%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL-FLKCQGVE 106
+IG G +G V+ A + E HE+ + +D V L ++ LK +
Sbjct: 9 KIGEGTYGTVFKAKNR-------ETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L + + K+ ++ +F + + G L V + L +G+ HS+
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSR 120
Query: 167 GILVLNLKPFNFILNEADRAVLGD 190
+L +LKP N ++N L D
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLAD 144
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 82/221 (37%), Gaps = 22/221 (9%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
+G G F EV+L L+ + A+K + R L + LK E I
Sbjct: 17 LGSGAFSEVFLVKQRLTGK------LFALKCIKKSPAFRDSSLENEIA--VLKKIKHENI 68
Query: 109 CWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG 167
L+ I ++M+ G + DR+ L+ G + + + + LH G
Sbjct: 69 VTLEDIYESTTHYYLVMQLVSGGELFDRI--LERGVYTEKDASLVIQQVLSAVKYLHENG 126
Query: 168 ILVLNLKPFNFIL---NEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQP 224
I+ +LKP N + E + ++ D ++ GTP Y+APE
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTA-----CGTPGYVAPEVL-- 179
Query: 225 EVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV 265
+ P S D W +L G P + ++++ +
Sbjct: 180 -AQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKI 219
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 79/208 (37%), Gaps = 22/208 (10%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
IG G FG L L+ E VAVK + V E +N L+ I
Sbjct: 28 IGSGNFGVARLMRDKLTKE------LVAVKYIERGAAIDENVQREIINHRSLRHPN---I 78
Query: 109 CWLQGISVINGKICIIMKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG 167
+ + + + IIM++ G + +R+ G+ S + L G+ HS
Sbjct: 79 VRFKEVILTPTHLAIIMEYASGGELYERICN--AGRFSEDEARFFFQQLLSGVSYCHSMQ 136
Query: 168 ILVLNLKPFNFILN--EADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPE-QWQP 224
I +LK N +L+ A R + D S +GTP Y+APE +
Sbjct: 137 ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS----TVGTPAYIAPEVLLRQ 192
Query: 225 EVRGPISFETDSWGFACSIIEMLTGVQP 252
E G I+ D W ++ ML G P
Sbjct: 193 EYDGKIA---DVWSCGVTLYVMLVGAYP 217
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 77/222 (34%), Gaps = 53/222 (23%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 13 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 64
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ + + + M + L + Y L QG
Sbjct: 65 ------PNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN---- 215
+ HS +L +LKP N ++N L D L R G P
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------------GLARAFGVPVRTYX 164
Query: 216 -------YMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 248
Y APE + G + T D W C EM+T
Sbjct: 165 HEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 4/98 (4%)
Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTP 214
D++ + LH I+ +LKP N +L + ++ + +GT
Sbjct: 130 DISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL-CTEFVGTL 188
Query: 215 NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
Y+APE + + + D W F E +TG +P
Sbjct: 189 QYLAPELLE---QKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 4/98 (4%)
Query: 155 DLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTP 214
D++ + LH I+ +LKP N +L + ++ + +GT
Sbjct: 129 DISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL-CTEFVGTL 187
Query: 215 NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
Y+APE + + + D W F E +TG +P
Sbjct: 188 QYLAPELLE---QKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 74/212 (34%), Gaps = 33/212 (15%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILH--------PVKEDRMRVLLERLNDLF 99
+IG G +G V+ A + L+ E VA+K + P R LL+ LN
Sbjct: 9 KIGEGTYGVVYKARNKLTGE------VVALKKIRLDTETEGVPSTAIREISLLKELNH-- 60
Query: 100 LKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
I L + K+ ++ + + M + L + Y L QG
Sbjct: 61 ------PNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAP 219
+ HS +L +LKP N ++N L D + +P R T +
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADF--------GLARAFGVPVRTYTHEVVTL 166
Query: 220 EQWQPEVR---GPISFETDSWGFACSIIEMLT 248
PE+ S D W C EM+T
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 85/219 (38%), Gaps = 21/219 (9%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
+G G V + ++++ E AVKI+ + +R + R ++ +CQG +
Sbjct: 21 LGEGAHARVQTCINLITSQ------EYAVKIIEK-QPGHIRSRVFREVEMLYQCQGHRNV 73
Query: 109 CWLQGISVINGKICIIM-KFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
L + ++ K GS+ + + + +L S V + D+A + LH+K
Sbjct: 74 LELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ---DVASALDFLHNK 130
Query: 167 GILVLNLKPFNFIL---NEADRAVLGDVXXXXXXXXXXXXS----SDLPRRLGTPNYMAP 219
GI +LKP N + N+ + D S +L G+ YMAP
Sbjct: 131 GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAP 190
Query: 220 EQWQP--EVRGPISFETDSWGFACSIIEMLTGVQPRCGR 256
E + E D W + +L+G P GR
Sbjct: 191 EVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR 229
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 95/261 (36%), Gaps = 49/261 (18%)
Query: 39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK------EDRMRVLL 92
K + L ++G G F VWLA ++ VA+KI+ K ED ++ LL
Sbjct: 17 KDARYILVRKLGWGHFSTVWLAKDMVNNT------HVAMKIVRGDKVYTEAAEDEIK-LL 69
Query: 93 ERLNDL------------------FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGD 134
+R+ND +G G+ + V+ + ++K YE
Sbjct: 70 QRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHR--- 126
Query: 135 RMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVXX 193
+ L V + + L G+ +H + GI+ ++KP N ++ D
Sbjct: 127 --------GIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIK 178
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG---V 250
+ T Y +PE + P D W AC I E++TG
Sbjct: 179 IADLGNACWYDEHYTNSIQTREYRSPEVL---LGAPWGCGADIWSTACLIFELITGDFLF 235
Query: 251 QPRCGRSVDEIYDAVVRRQEI 271
+P G S + D + + E+
Sbjct: 236 EPDEGHSYTKDDDHIAQIIEL 256
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 95/261 (36%), Gaps = 49/261 (18%)
Query: 39 KPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK------EDRMRVLL 92
K + L ++G G F VWLA ++ VA+KI+ K ED ++ LL
Sbjct: 17 KDARYILVRKLGWGHFSTVWLAKDMVNNT------HVAMKIVRGDKVYTEAAEDEIK-LL 69
Query: 93 ERLNDL------------------FLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGD 134
+R+ND +G G+ + V+ + ++K YE
Sbjct: 70 QRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHR--- 126
Query: 135 RMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVXX 193
+ L V + + L G+ +H + GI+ ++KP N ++ D
Sbjct: 127 --------GIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIK 178
Query: 194 XXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG---V 250
+ T Y +PE + P D W AC I E++TG
Sbjct: 179 IADLGNACWYDEHYTNSIQTREYRSPEVL---LGAPWGCGADIWSTACLIFELITGDFLF 235
Query: 251 QPRCGRSVDEIYDAVVRRQEI 271
+P G S + D + + E+
Sbjct: 236 EPDEGHSYTKDDDHIAQIIEL 256
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 17/165 (10%)
Query: 152 YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 211
Y ++ + + +H GI+ +LKP NF++ + ++ D ++
Sbjct: 160 YWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKD--SQV 217
Query: 212 GTPNYMAPEQWQP--------EVRGPISFETDSWGFACSIIEMLTGVQP--RCGRSVDEI 261
G NYM PE + + + IS ++D W C + M G P + + ++
Sbjct: 218 GAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 277
Query: 262 YDAVVRRQEI--PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 304
+ + EI P IP +++VL C + D + R + ++L
Sbjct: 278 HAIIDPNHEIEFPDIPE---KDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 85/219 (38%), Gaps = 21/219 (9%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFLKCQGVEGI 108
+G G V + ++++ E AVKI+ + +R + R ++ +CQG +
Sbjct: 21 LGEGAHARVQTCINLITSQ------EYAVKIIEK-QPGHIRSRVFREVEMLYQCQGHRNV 73
Query: 109 CWLQGISVINGKICIIM-KFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSK 166
L + ++ K GS+ + + + +L S V + D+A + LH+K
Sbjct: 74 LELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ---DVASALDFLHNK 130
Query: 167 GILVLNLKPFNFIL---NEADRAVLGDVXXXXXXXXXXXXS----SDLPRRLGTPNYMAP 219
GI +LKP N + N+ + D S +L G+ YMAP
Sbjct: 131 GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAP 190
Query: 220 EQWQP--EVRGPISFETDSWGFACSIIEMLTGVQPRCGR 256
E + E D W + +L+G P GR
Sbjct: 191 EVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR 229
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 28/149 (18%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEY----HEVAVKILHPV----KEDRMRV-LLERLN--- 96
+G G FG+V +C ++ VAVKI+ V + R + +LE LN
Sbjct: 22 LGEGAFGKVV---------ECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTD 72
Query: 97 -DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAID 155
+ +C V+ + W + +G ICI+ + S D + + L ++ + A
Sbjct: 73 PNSTFRC--VQMLEWFEH----HGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQ 126
Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEAD 184
+ + + LHS + +LKP N + ++D
Sbjct: 127 ICKSVNFLHSNKLTHTDLKPENILFVQSD 155
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 28/149 (18%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEY----HEVAVKILHPV----KEDRMRV-LLERLN--- 96
+G G FG+V +C ++ VAVKI+ V + R + +LE LN
Sbjct: 22 LGEGAFGKVV---------ECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTD 72
Query: 97 -DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAID 155
+ +C V+ + W + +G ICI+ + S D + + L ++ + A
Sbjct: 73 PNSTFRC--VQMLEWFEH----HGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQ 126
Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEAD 184
+ + + LHS + +LKP N + ++D
Sbjct: 127 ICKSVNFLHSNKLTHTDLKPENILFVQSD 155
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 34/98 (34%), Gaps = 21/98 (21%)
Query: 159 GILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMA 218
GI LHS GI+ +LKP N ++ + D L R GT M
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF--------------GLARTAGTSFMMT 183
Query: 219 PEQWQPEVRGP-------ISFETDSWGFACSIIEMLTG 249
PE R P D W C + EM+ G
Sbjct: 184 PEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 39/110 (35%), Gaps = 3/110 (2%)
Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN 215
+ + +L H G++ +LKP N +L + + GTP
Sbjct: 112 ILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPG 171
Query: 216 YMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV 265
Y++PE + E G D W + +L G P ++Y +
Sbjct: 172 YLSPEVLRKEAYGK---PVDIWACGVILYILLVGYPPFWDEDQHKLYQQI 218
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD 190
+ + + +HS+GI+ NLKP N ++E+ +GD
Sbjct: 125 ILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGD 159
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 46/119 (38%), Gaps = 29/119 (24%)
Query: 144 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXX 203
L+ S++ Y + QG+ LH IL +LKP N +L+E L D
Sbjct: 109 LTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADF------------ 156
Query: 204 SSDLPRRLGTPN-----------YMAPE-QWQPEVRGPISFETDSWGFACSIIEMLTGV 250
L + G+PN Y APE + + G D W C + E+L V
Sbjct: 157 --GLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYG---VGVDMWAVGCILAELLLRV 210
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 82/232 (35%), Gaps = 49/232 (21%)
Query: 37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVK--------ILHPVKEDRM 88
W P + +G G +G V A D H VAVK I+H + R
Sbjct: 14 WEVPERYQNLSPVGSGAYGSVCAAF------DTKTGHRVAVKKLSRPFQSIIHAKRTYRE 67
Query: 89 RVLLERLN--------DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLK 140
LL+ + D+F + +E + ++ + G D +K
Sbjct: 68 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-------------ADLNNIVK 114
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 115 CAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------GLA 168
Query: 201 XXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ + T Y APE W + D W C + E+LTG
Sbjct: 169 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 215
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 87/232 (37%), Gaps = 22/232 (9%)
Query: 25 RTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK 84
R AV+ D +L IG G FG L S E VAVK + +
Sbjct: 3 RPAVSGPMDLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNE------LVAVKYIERGE 56
Query: 85 EDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGK 143
+ V E +N L+ I + + + + I+M++ G G+ ++ G+
Sbjct: 57 KIAANVKREIINHRSLRHPN---IVRFKEVILTPTHLAIVMEYASG--GELFERICNAGR 111
Query: 144 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN--EADRAVLGDVXXXXXXXXXX 201
S + L G+ H+ + +LK N +L+ A R + D
Sbjct: 112 FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 171
Query: 202 XXSSDLPRRLGTPNYMAPE-QWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
S +GTP Y+APE + E G ++ D W ++ ML G P
Sbjct: 172 QPKS----TVGTPAYIAPEVLLKKEYDGKVA---DVWSCGVTLYVMLVGAYP 216
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 87/232 (37%), Gaps = 22/232 (9%)
Query: 25 RTAVATSNDTNAWIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVK 84
R AVA D +L IG G FG L + E VAVK + +
Sbjct: 3 RPAVAGPMDLPIMHDSDRYELVKDIGAGNFGVARLMRDKQANE------LVAVKYIERGE 56
Query: 85 EDRMRVLLERLNDLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQL-KGGK 143
+ V E +N L+ I + + + + I+M++ G G+ ++ G+
Sbjct: 57 KIDENVKREIINHRSLRHPN---IVRFKEVILTPTHLAIVMEYASG--GELFERICNAGR 111
Query: 144 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN--EADRAVLGDVXXXXXXXXXX 201
S + L G+ H+ + +LK N +L+ A R + D
Sbjct: 112 FSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHS 171
Query: 202 XXSSDLPRRLGTPNYMAPE-QWQPEVRGPISFETDSWGFACSIIEMLTGVQP 252
S +GTP Y+APE + E G ++ D W ++ ML G P
Sbjct: 172 QPKS----AVGTPAYIAPEVLLKKEYDGKVA---DVWSCGVTLYVMLVGAYP 216
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 46/135 (34%), Gaps = 23/135 (17%)
Query: 159 GILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMA 218
GI LHS GI+ +LKP N ++ + D L R GT M
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG--------------LARTAGTSFMME 183
Query: 219 PEQWQPEVRGP-------ISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR--Q 269
PE R P D W C + EM+ GR + ++ V+ +
Sbjct: 184 PEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGT 243
Query: 270 EIPPIPSGLPPAVEN 284
P L P V N
Sbjct: 244 PCPAFMKKLQPTVRN 258
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 139 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 198
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 117 VKSQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDF------G 170
Query: 199 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ + T Y APE W + D W C + E+LTG
Sbjct: 171 LCRHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 219
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 74/200 (37%), Gaps = 29/200 (14%)
Query: 69 CDEYHEVAVKIL----------HPVKEDRMRVLLERLNDLFLKCQGVEGICWLQGISVIN 118
C EY AVKI+ V+E R L E D+ K G I L+ N
Sbjct: 42 CKEY---AVKIIDVTGGGSFSAEEVQELREATLKEV--DILRKVSGHPNIIQLKDTYETN 96
Query: 119 GKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAI--DLAQGILQLHSKGILVLNLKP 175
++ + G + D + + K++LS I L + I LH I+ +LKP
Sbjct: 97 TFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKP 152
Query: 176 FNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGP---ISF 232
N +L++ L D L GTP+Y+APE + +
Sbjct: 153 ENILLDDDMNIKLTDFGFSCQLDP----GEKLREVCGTPSYLAPEIIECSMNDNHPGYGK 208
Query: 233 ETDSWGFACSIIEMLTGVQP 252
E D W + +L G P
Sbjct: 209 EVDMWSTGVIMYTLLAGSPP 228
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 57/135 (42%), Gaps = 9/135 (6%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDL-FLKCQGVE 106
+IG G +G V+ A + E HE+ + +D V L ++ LK +
Sbjct: 9 KIGEGTYGTVFKAKNR-------ETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 107 GICWLQGISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK 166
I L + + K+ ++ +F + + G L V + L +G+ HS+
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSR 120
Query: 167 GILVLNLKPFNFILN 181
+L +LKP N ++N
Sbjct: 121 NVLHRDLKPQNLLIN 135
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 82/232 (35%), Gaps = 49/232 (21%)
Query: 37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVK--------ILHPVKEDRM 88
W P + +G G +G V A D H VAVK I+H + R
Sbjct: 24 WEVPERYQNLSPVGSGAYGSVCAAF------DTKTGHRVAVKKLSRPFQSIIHAKRTYRE 77
Query: 89 RVLLERLN--------DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLK 140
LL+ + D+F + +E + ++ + G D +K
Sbjct: 78 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-------------ADLNNIVK 124
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 125 CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------GLA 178
Query: 201 XXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ + T Y APE W + D W C + E+LTG
Sbjct: 179 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 225
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 82/232 (35%), Gaps = 49/232 (21%)
Query: 37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVK--------ILHPVKEDRM 88
W P + +G G +G V A D H VAVK I+H + R
Sbjct: 18 WEVPERYQNLSPVGSGAYGSVCAAF------DTKTGHRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 89 RVLLERLN--------DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLK 140
LL+ + D+F + +E + ++ + G D +K
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-------------ADLNNIVK 118
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------YLA 172
Query: 201 XXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ + T Y APE W + D W C + E+LTG
Sbjct: 173 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 219
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 82/211 (38%), Gaps = 20/211 (9%)
Query: 48 RIGRGPFGEVWLATHYLSTEDCDEYHEVAVK--ILHPVKEDRMRVLLERLNDL-FLKCQG 104
+IG+G FGEV+ A H + + +VA+K ++ KE L + L LK +
Sbjct: 25 KIGQGTFGEVFKARHRKTGQ------KVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 105 VEG---ICWLQG--ISVINGKICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQG 159
V IC + + I ++ F E + ++ + K +LS + R L G
Sbjct: 79 VVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVL-VKFTLSEIKRVMQMLLNG 137
Query: 160 ILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSD-LPRRLGTPNYMA 218
+ +H IL ++K N ++ L D + R+ T Y
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 219 PEQWQPEV-RGPISFETDSWGFACSIIEMLT 248
PE E GP D WG C + EM T
Sbjct: 198 PELLLGERDYGP---PIDLWGAGCIMAEMWT 225
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 139 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 198
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 119 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDF------G 172
Query: 199 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ + T Y APE W + D W C + E+LTG
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 221
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 139 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 198
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 123 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDF------G 176
Query: 199 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ + T Y APE W + D W C + E+LTG
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 225
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 82/232 (35%), Gaps = 49/232 (21%)
Query: 37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVK--------ILHPVKEDRM 88
W P + +G G +G V A D H VAVK I+H + R
Sbjct: 38 WEVPERYQNLSPVGSGAYGSVCAAF------DTKTGHRVAVKKLSRPFQSIIHAKRTYRE 91
Query: 89 RVLLERLN--------DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLK 140
LL+ + D+F + +E + ++ + G D +K
Sbjct: 92 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-------------ADLNNIVK 138
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 139 CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------GLA 192
Query: 201 XXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ + T Y APE W + D W C + E+LTG
Sbjct: 193 RHTDDEMTGYVATRWYRAPEIMLNWM-----HYNQTVDIWSVGCIMAELLTG 239
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 139 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 198
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 117 VKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDF------G 170
Query: 199 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ + T Y APE W + D W C + E+LTG
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 219
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 65/152 (42%), Gaps = 16/152 (10%)
Query: 49 IGRGPFGEV-----WLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFL--- 100
+G+G FG+V L + Y + + E IL V +LL LN ++
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEV------MLLASLNHQYVVRY 67
Query: 101 KCQGVEGICWLQGISVINGK--ICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQ 158
+E +++ ++ + K + I M++ E + + +R + +
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILE 127
Query: 159 GILQLHSKGILVLNLKPFNFILNEADRAVLGD 190
+ +HS+GI+ +LKP N ++E+ +GD
Sbjct: 128 ALSYIHSQGIIHRDLKPMNIFIDESRNVKIGD 159
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 80/220 (36%), Gaps = 32/220 (14%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL----------HPVKEDRMRVLLERLNDL 98
+GRG V H C EY AVKI+ V+E R L E D+
Sbjct: 25 LGRGVSSVVRRCIH---KPTCKEY---AVKIIDVTGGGSFSAEEVQELREATLKEV--DI 76
Query: 99 FLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAI--D 155
K G I L+ N ++ + G + D + + K++LS I
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRA 132
Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN 215
L + I LH I+ +LKP N +L++ L D L GTP+
Sbjct: 133 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP----GEKLRSVCGTPS 188
Query: 216 YMAPEQWQPEVRGP---ISFETDSWGFACSIIEMLTGVQP 252
Y+APE + + E D W + +L G P
Sbjct: 189 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 82/232 (35%), Gaps = 49/232 (21%)
Query: 37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVK--------ILHPVKEDRM 88
W P + +G G +G V A D H VAVK I+H + R
Sbjct: 37 WEVPERYQNLSPVGSGAYGSVCAAF------DTKTGHRVAVKKLSRPFQSIIHAKRTYRE 90
Query: 89 RVLLERLN--------DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLK 140
LL+ + D+F + +E + ++ + G D +K
Sbjct: 91 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-------------ADLNNIVK 137
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 138 CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------GLA 191
Query: 201 XXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ + T Y APE W + D W C + E+LTG
Sbjct: 192 RHTDDEMTGYVATRWYRAPEIMLNWM-----HYNQTVDIWSVGCIMAELLTG 238
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 65/152 (42%), Gaps = 16/152 (10%)
Query: 49 IGRGPFGEV-----WLATHYLSTEDCDEYHEVAVKILHPVKEDRMRVLLERLNDLFL--- 100
+G+G FG+V L + Y + + E IL V +LL LN ++
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEV------MLLASLNHQYVVRY 67
Query: 101 KCQGVEGICWLQGISVINGK--ICIIMKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQ 158
+E +++ ++ + K + I M++ E + + +R + +
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILE 127
Query: 159 GILQLHSKGILVLNLKPFNFILNEADRAVLGD 190
+ +HS+GI+ +LKP N ++E+ +GD
Sbjct: 128 ALSYIHSQGIIHRDLKPMNIFIDESRNVKIGD 159
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 82/232 (35%), Gaps = 49/232 (21%)
Query: 37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVK--------ILHPVKEDRM 88
W P + +G G +G V A D H VAVK I+H + R
Sbjct: 38 WEVPERYQNLSPVGSGAYGSVCAAF------DTKTGHRVAVKKLSRPFQSIIHAKRTYRE 91
Query: 89 RVLLERLN--------DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLK 140
LL+ + D+F + +E + ++ + G D +K
Sbjct: 92 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-------------ADLNNIVK 138
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 139 CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------GLA 192
Query: 201 XXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ + T Y APE W + D W C + E+LTG
Sbjct: 193 RHTDDEMXGXVATRWYRAPEIMLNWM-----HYNQTVDIWSVGCIMAELLTG 239
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 139 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 198
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 128 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDF------G 181
Query: 199 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ + T Y APE W + D W C + E+LTG
Sbjct: 182 LARHTDDEMTGYVATRWYRAPEIMLNWM-----HYNQTVDIWSVGCIMAELLTG 230
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 82/232 (35%), Gaps = 49/232 (21%)
Query: 37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVK--------ILHPVKEDRM 88
W P + +G G +G V A D H VAVK I+H + R
Sbjct: 14 WEVPERYQNLSPVGSGAYGSVCAAF------DTKTGHRVAVKKLSRPFQSIIHAKRTYRE 67
Query: 89 RVLLERLN--------DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLK 140
LL+ + D+F + +E + ++ + G D +K
Sbjct: 68 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-------------ADLNNIVK 114
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 115 CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------GLA 168
Query: 201 XXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ + T Y APE W + D W C + E+LTG
Sbjct: 169 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 215
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 139 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 198
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 122 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDF------G 175
Query: 199 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ + T Y APE W + D W C + E+LTG
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 224
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 29.3 bits (64), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 80/220 (36%), Gaps = 32/220 (14%)
Query: 49 IGRGPFGEVWLATHYLSTEDCDEYHEVAVKIL----------HPVKEDRMRVLLERLNDL 98
+GRG V H C EY AVKI+ V+E R L E D+
Sbjct: 12 LGRGVSSVVRRCIH---KPTCKEY---AVKIIDVTGGGSFSAEEVQELREATLKEV--DI 63
Query: 99 FLKCQGVEGICWLQGISVINGKICIIMKFYE-GSVGDRMAQLKGGKLSLSNVFRYAI--D 155
K G I L+ N ++ + G + D + + K++LS I
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRA 119
Query: 156 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN 215
L + I LH I+ +LKP N +L++ L D L GTP+
Sbjct: 120 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP----GEKLREVCGTPS 175
Query: 216 YMAPEQWQPEVRGP---ISFETDSWGFACSIIEMLTGVQP 252
Y+APE + + E D W + +L G P
Sbjct: 176 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 139 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 198
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 122 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDF------G 175
Query: 199 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ + T Y APE W + D W C + E+LTG
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 224
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 82/232 (35%), Gaps = 49/232 (21%)
Query: 37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVK--------ILHPVKEDRM 88
W P + +G G +G V A D H VAVK I+H + R
Sbjct: 18 WEVPERYQNLSPVGSGAYGSVCAAF------DTKTGHRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 89 RVLLERLN--------DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLK 140
LL+ + D+F + +E + ++ + G D +K
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-------------ADLNNIVK 118
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------GLA 172
Query: 201 XXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ + T Y APE W + D W C + E+LTG
Sbjct: 173 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 219
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 47/115 (40%), Gaps = 16/115 (13%)
Query: 139 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE-ADRAVLGDVXXXXXX 197
+K KL+ +V + +G+ +HS I+ +LKP N +NE + +LG
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILG-------F 169
Query: 198 XXXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ + T Y APE W + D W C + E+LTG
Sbjct: 170 GLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 219
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 82/232 (35%), Gaps = 49/232 (21%)
Query: 37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVK--------ILHPVKEDRM 88
W P + +G G +G V A D H VAVK I+H + R
Sbjct: 28 WEVPERYQNLAPVGSGAYGSVCAAF------DTKTGHRVAVKKLSRPFQSIIHAKRTYRE 81
Query: 89 RVLLERLN--------DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLK 140
LL+ + D+F + +E + ++ + G D +K
Sbjct: 82 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-------------ADLNNIVK 128
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 129 CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------GLA 182
Query: 201 XXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ + T Y APE W + D W C + E+LTG
Sbjct: 183 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 229
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 14/114 (12%)
Query: 139 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 198
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 124 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 177
Query: 199 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ ++ + T Y APE W + D W C + E+LTG
Sbjct: 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 226
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 28.9 bits (63), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 14/114 (12%)
Query: 139 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 198
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 124 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 177
Query: 199 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ ++ + T Y APE W + D W C + E+LTG
Sbjct: 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 226
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 28.9 bits (63), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 14/114 (12%)
Query: 139 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 198
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 124 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 177
Query: 199 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 249
+ ++ + T Y APE W + D W C + E+LTG
Sbjct: 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 226
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 28.9 bits (63), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 139 LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 198
+K KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 123 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------G 176
Query: 199 XXXXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ + T Y APE W + D W C + E+LTG
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 225
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 28.9 bits (63), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 82/232 (35%), Gaps = 49/232 (21%)
Query: 37 WIKPSALKLRHRIGRGPFGEVWLATHYLSTEDCDEYHEVAVK--------ILHPVKEDRM 88
W P + +G G +G V A D H VAVK I+H + R
Sbjct: 14 WEVPERYQNLSPVGSGAYGSVCAAF------DTKTGHRVAVKKLSRPFQSIIHAKRTYRE 67
Query: 89 RVLLERLN--------DLFLKCQGVEGICWLQGISVINGKICIIMKFYEGSVGDRMAQLK 140
LL+ + D+F + +E + ++ + G D +K
Sbjct: 68 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-------------ADLNNIVK 114
Query: 141 GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 200
KL+ +V + +G+ +HS I+ +LKP N +NE + D
Sbjct: 115 CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------GLA 168
Query: 201 XXXSSDLPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIEMLTG 249
++ + T Y APE W + D W C + E+LTG
Sbjct: 169 RHTDDEMAGFVATRWYRAPEIMLNWMHYNQT-----VDIWSVGCIMAELLTG 215
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,258,849
Number of Sequences: 62578
Number of extensions: 816052
Number of successful extensions: 2930
Number of sequences better than 100.0: 804
Number of HSP's better than 100.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 652
Number of HSP's that attempted gapping in prelim test: 2132
Number of HSP's gapped (non-prelim): 902
length of query: 627
length of database: 14,973,337
effective HSP length: 105
effective length of query: 522
effective length of database: 8,402,647
effective search space: 4386181734
effective search space used: 4386181734
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)