Query 006889
Match_columns 627
No_of_seqs 306 out of 1844
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 11:38:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006889.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006889hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zyz_A Beta-D-glucoside glucoh 100.0 7E-133 2E-137 1143.1 45.9 559 8-623 105-711 (713)
2 3abz_A Beta-glucosidase I; gly 100.0 1E-132 4E-137 1156.5 47.5 545 8-622 94-834 (845)
3 2x41_A Beta-glucosidase; hydro 100.0 3E-131 9E-136 1136.2 42.8 538 8-621 111-710 (721)
4 3rrx_A EXO-1,3/1,4-beta-glucan 100.0 3E-100 1E-104 873.6 33.6 430 8-487 154-619 (822)
5 1x38_A Beta-D-glucan exohydrol 100.0 7.9E-99 3E-103 850.7 34.9 430 8-482 139-601 (602)
6 3bmx_A Uncharacterized lipopro 100.0 3E-89 1E-93 777.0 32.6 413 8-484 168-640 (642)
7 3sql_A Glycosyl hydrolase fami 100.0 9.3E-64 3.2E-68 549.1 24.3 363 8-425 142-522 (535)
8 3tev_A Glycosyl hyrolase, fami 100.0 1E-51 3.5E-56 434.5 15.6 204 8-227 125-341 (351)
9 2oxn_A Beta-hexosaminidase; TI 100.0 5.1E-45 1.7E-49 382.1 5.7 193 8-217 109-309 (340)
10 4gvf_A Beta-hexosaminidase; TI 100.0 1.7E-44 5.9E-49 378.5 8.6 196 8-217 112-315 (349)
11 4g6c_A Beta-hexosaminidase 1; 100.0 1.1E-43 3.8E-48 372.7 9.3 192 8-216 124-322 (348)
12 3idu_A Uncharacterized protein 96.8 0.0034 1.2E-07 55.9 7.9 50 527-585 34-84 (127)
13 2l0d_A Cell surface protein; s 96.3 0.012 4.2E-07 51.2 8.4 61 527-609 20-82 (114)
14 2kut_A Uncharacterized protein 96.1 0.0037 1.3E-07 55.1 4.0 55 527-585 17-73 (122)
15 3isy_A Bsupi, intracellular pr 93.2 0.37 1.3E-05 42.1 8.7 67 527-609 19-99 (120)
16 4ep8_B Urease subunit beta; al 91.0 0.25 8.7E-06 41.1 4.6 51 528-582 20-82 (101)
17 2x3c_A Toxic extracellular end 88.8 0.89 3E-05 47.2 7.9 62 527-590 37-116 (343)
18 4ac7_B Urease subunit beta; hy 88.4 0.54 1.8E-05 40.8 4.9 52 528-583 26-89 (126)
19 4ubp_B Protein (urease (chain 88.4 0.54 1.8E-05 40.8 4.9 52 528-583 26-89 (126)
20 1yew_A Particulate methane mon 87.3 1.3 4.5E-05 45.4 7.8 55 527-585 265-336 (382)
21 2iaa_C Azurin; quinoprotein, t 86.9 0.92 3.1E-05 40.1 5.8 54 529-584 27-99 (128)
22 1w8o_A Bacterial sialidase; 3D 86.8 1.1 3.6E-05 50.0 7.7 102 470-611 337-440 (601)
23 1nwp_A Azurin; electron transp 86.2 0.92 3.2E-05 40.1 5.4 24 570-593 86-112 (128)
24 2e6j_A Hydin protein; PAPD, st 86.2 2.1 7.1E-05 36.2 7.6 61 527-593 27-87 (112)
25 1cuo_A Protein (azurin ISO-2); 83.4 1.7 5.8E-05 38.4 5.8 15 570-584 86-100 (129)
26 2ccw_A Azurin II, AZN-2; elect 82.5 1.7 6E-05 38.3 5.5 15 570-584 86-100 (129)
27 3qbt_B Inositol polyphosphate 81.3 2.7 9.4E-05 37.6 6.4 55 527-585 44-100 (140)
28 3ay2_A Lipid modified azurin p 81.1 1.2 4.2E-05 41.2 4.1 15 570-584 125-139 (167)
29 2ys4_A Hydrocephalus-inducing 79.2 2.8 9.6E-05 36.3 5.6 59 527-596 42-100 (122)
30 3rfr_A PMOB; membrane, oxidore 78.1 4 0.00014 42.4 7.0 54 527-585 299-368 (419)
31 3qga_A UREA2, fusion of urease 76.7 2.2 7.5E-05 40.6 4.3 51 529-583 126-188 (225)
32 3fsa_A Azurin; copper, cupredo 75.7 4.6 0.00016 35.4 5.9 55 529-584 28-100 (125)
33 1e9y_A Urease subunit alpha; h 75.0 2.1 7.2E-05 41.1 3.7 51 529-583 126-188 (238)
34 2aan_A Auracyanin A; cupredoxi 66.5 13 0.00043 32.7 6.8 18 568-585 98-115 (139)
35 3kmh_A D-lyxose isomerase; cup 65.8 4.8 0.00016 39.1 4.0 57 533-595 130-196 (246)
36 2qsv_A Uncharacterized protein 65.2 9.1 0.00031 36.7 6.1 51 527-585 135-185 (220)
37 1xf1_A C5A peptidase, SCP; hyd 62.5 6.1 0.00021 46.5 5.0 58 527-585 500-564 (926)
38 4dzg_A PLIG; lysozyme inhibito 59.5 11 0.00038 32.3 4.9 44 569-612 34-95 (114)
39 3qis_A Inositol polyphosphate 46.7 45 0.0015 34.5 8.0 57 527-588 47-105 (366)
40 2cal_A Rusticyanin; iron respi 46.3 40 0.0014 30.3 6.6 54 529-583 70-128 (154)
41 4ay0_A Chaperone protein CAF1M 45.1 50 0.0017 31.6 7.5 53 529-585 29-84 (218)
42 1qhq_A Protein (auracyanin); e 42.1 73 0.0025 27.6 7.7 17 569-585 98-114 (140)
43 3q48_A Chaperone CUPB2; IG fol 41.1 69 0.0024 31.4 8.0 54 529-584 45-102 (257)
44 3hrz_B Cobra venom factor; ser 40.9 65 0.0022 31.4 7.7 56 527-585 97-154 (252)
45 4gy7_A Urease; JACK bean, hydr 39.7 23 0.00077 41.2 4.7 51 528-582 151-213 (840)
46 1iby_A Nitrosocyanin; RED copp 39.1 32 0.0011 28.7 4.6 41 529-585 47-87 (112)
47 4hci_A Cupredoxin 1; structura 39.1 55 0.0019 26.6 5.9 17 569-585 61-77 (100)
48 2qsv_A Uncharacterized protein 37.9 1.5E+02 0.005 28.0 9.6 52 527-589 20-72 (220)
49 4djm_A DRAB; chaperone, PILI; 37.8 67 0.0023 31.2 7.1 52 529-584 39-91 (239)
50 2lv4_A Putative outer membrane 35.8 1E+02 0.0035 26.7 6.9 65 559-624 48-134 (146)
51 4g9s_B Inhibitor of G-type lys 35.3 72 0.0025 26.8 6.2 12 599-610 78-90 (111)
52 2co7_B SAFB chaperone, putativ 35.2 70 0.0024 30.6 6.8 53 529-585 29-82 (221)
53 2xwx_A GBPA, glcnac-binding pr 34.8 68 0.0023 33.6 7.0 61 527-611 312-372 (391)
54 4hs4_A Chromate reductase; tri 33.5 67 0.0023 30.0 6.2 54 325-389 62-120 (199)
55 4h7p_A Malate dehydrogenase; s 30.7 18 0.00062 37.3 1.8 56 332-393 96-155 (345)
56 1g43_A Scaffolding protein; be 30.0 19 0.00067 32.7 1.7 34 564-598 97-132 (160)
57 3lcm_A SMU.1420, putative oxid 29.1 84 0.0029 29.0 6.1 55 325-390 62-131 (196)
58 4b9f_A Cellulosomal-scaffoldin 28.4 29 0.00099 31.3 2.5 35 564-599 94-128 (152)
59 2hr0_B Complement C3 alpha' ch 28.3 1.2E+02 0.0041 35.3 8.5 57 527-585 96-154 (915)
60 1klf_A FIMC chaperone, chapero 27.8 1.2E+02 0.0042 28.5 7.0 52 529-583 17-69 (205)
61 5mdh_A Malate dehydrogenase; o 27.5 40 0.0014 34.4 3.7 56 332-393 75-134 (333)
62 2x0j_A Malate dehydrogenase; o 27.4 15 0.00053 36.9 0.6 54 333-393 66-123 (294)
63 3zqx_A Cellulose 1,4-beta-cell 26.2 16 0.00055 32.8 0.4 35 564-599 81-116 (146)
64 3p0r_A Azoreductase; structura 26.0 79 0.0027 29.6 5.3 54 327-391 83-151 (211)
65 1g0d_A Protein-glutamine gamma 25.8 75 0.0026 35.7 5.7 57 527-585 487-546 (695)
66 1l4i_A SFAE protein; periplasm 25.8 90 0.0031 29.4 5.6 51 529-582 17-68 (206)
67 3vta_A Cucumisin; subtilisin-l 25.2 2.6E+02 0.0089 30.9 10.2 78 527-623 538-618 (621)
68 3vku_A L-LDH, L-lactate dehydr 24.8 33 0.0011 34.9 2.5 56 333-393 73-130 (326)
69 2q3z_A Transglutaminase 2; tra 24.5 72 0.0025 35.9 5.3 57 527-585 488-548 (687)
70 3lab_A Putative KDPG (2-keto-3 24.5 96 0.0033 29.6 5.5 57 99-179 78-136 (217)
71 4fxk_B Complement C4-A alpha c 24.4 64 0.0022 36.8 5.1 55 527-585 169-224 (767)
72 3ldh_A Lactate dehydrogenase; 24.4 42 0.0015 34.3 3.2 53 334-393 87-143 (330)
73 1rli_A Trp repressor binding p 24.1 1.3E+02 0.0043 26.9 6.3 53 326-389 61-126 (184)
74 2pn5_A TEP1R, thioester-contai 23.3 1.5E+02 0.0052 36.0 8.5 62 527-589 681-744 (1325)
75 1oju_A MDH, malate dehydrogena 23.3 21 0.00072 35.9 0.6 57 332-393 65-123 (294)
76 1t5b_A Acyl carrier protein ph 23.2 1.2E+02 0.0039 27.6 5.9 53 328-391 78-145 (201)
77 2hpv_A FMN-dependent NADH-azor 23.2 95 0.0032 28.6 5.3 37 327-374 85-121 (208)
78 3szu_A ISPH, 4-hydroxy-3-methy 23.0 86 0.0029 31.9 5.1 78 327-424 216-295 (328)
79 3zuc_A Cellulosomal scaffoldin 23.0 29 0.00099 31.4 1.4 35 564-599 89-125 (153)
80 3u7i_A FMN-dependent NADH-azor 22.2 1.1E+02 0.0037 29.1 5.5 38 327-375 85-122 (223)
81 3ha2_A NADPH-quinone reductase 22.2 1.4E+02 0.0049 27.2 6.2 57 324-391 39-105 (177)
82 3fvw_A Putative NAD(P)H-depend 22.1 1.4E+02 0.0047 27.4 6.1 40 325-375 56-95 (192)
83 2xg5_A PAPD, chaperone protein 22.0 1.6E+02 0.0055 27.9 6.7 53 529-584 17-72 (218)
84 3svl_A Protein YIEF; E. coli C 21.6 1.7E+02 0.0059 26.9 6.7 40 325-375 61-100 (193)
85 7mdh_A Protein (malate dehydro 21.3 34 0.0012 35.6 1.8 57 331-393 103-163 (375)
86 3tl2_A Malate dehydrogenase; c 21.1 27 0.00092 35.4 0.9 56 333-393 75-132 (315)
87 2l8a_A Endoglucanase; carbohyd 20.9 26 0.00089 31.5 0.7 36 564-600 86-122 (149)
88 3gfu_C Chaperone protein FAEE; 20.7 2.1E+02 0.0073 27.3 7.2 53 529-584 17-71 (224)
89 1vjj_A Protein-glutamine gluta 20.7 1E+02 0.0036 34.6 5.6 57 527-585 497-556 (692)
90 1eiw_A Hypothetical protein MT 20.5 66 0.0023 27.3 3.1 77 332-429 34-110 (111)
91 1rtt_A Conserved hypothetical 20.4 97 0.0033 28.2 4.7 53 326-389 62-119 (193)
No 1
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=100.00 E-value=7e-133 Score=1143.08 Aligned_cols=559 Identities=25% Similarity=0.380 Sum_probs=465.1
Q ss_pred ccee-eCcccc-ccCCCCCCcccccCCCCHHHHHHHHHHHHHHHhcCCCCCCceEEeecccccccCCCCCCCCccccccc
Q 006889 8 GLTY-WSPNVN-IFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNAR 85 (627)
Q Consensus 8 G~~~-~aP~~d-i~r~p~~gr~~e~fgeDP~l~~~~a~a~v~GlQ~~~~~~~gv~a~~KHF~g~g~~~~~~~~r~~~~~~ 85 (627)
|+|+ |+|++| |.|||+|||++|+|||||+|+++|+.|+|+|||+. ||+||+|||||||++. .|...+++
T Consensus 105 Gi~~~laP~vd~v~r~P~~gR~~e~fgeDP~l~~~~a~a~v~Glq~~-----gV~a~~KHF~g~g~e~----~r~~~~~~ 175 (713)
T 3zyz_A 105 GIHVILGPVAGPLGKTPQGGRNWEGFGVDPYLTGIAMGQTINGIQSV-----GVQATAKHYILNEQEL----NRETISSN 175 (713)
T ss_dssp TCSEECCCBCSSCCCSTTCTTGGGTTCSCHHHHHHHHHHHHHHHHHT-----TCEEEEEEETTCCCST----TTTTCEEC
T ss_pred CCCEEECCeecccCCCCCCCcccccccCCHHHHHHHHHHHHHHHhhC-----CeEEEEecCccCCccc----cCccccCc
Confidence 9999 999999 88999999999999999999999999999999998 8999999999999764 46667789
Q ss_pred CCHHHHHHhccHHHHHHHHcCCCceEEeccccCCCcccccCHHHHHHHHhhhcCCCeEEEcChhhhhhhhccccccCChH
Q 006889 86 VSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPE 165 (627)
Q Consensus 86 ~~~~~l~e~~l~pF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~~LR~e~gf~G~v~SD~~~~~~~~~~~~~~~~~~ 165 (627)
+++++|+|+||+||+++|++| +.+||||||++||+|+|.|+++|+++||+||||+|+|||||+++.
T Consensus 176 v~~~~l~e~~l~pF~~ai~ag-~~~VM~syn~vng~pa~~s~~ll~~iLR~e~GF~G~VvSD~~a~~------------- 241 (713)
T 3zyz_A 176 PDDRTLHELYTWPFADAVQAN-VASVMCSYNKVNTTWACEDQYTLQTVLKDQLGFPGYVMTDWNAQH------------- 241 (713)
T ss_dssp CCHHHHHHTTTHHHHHHHHTT-CSEEEECSSEETTEEGGGCHHHHCCCCCCCSCCCSEEEESTTCCC-------------
T ss_pred CCHHHHHHhhhHHHHHHHHcC-CCeEEeeccccCCccCcCCHHHHHHHHHHHcCCCEEEEecCccHH-------------
Confidence 999999999999999999976 899999999999999999999999999999999999999998642
Q ss_pred HHHHHHHHcCCCcCChh--------hHHHHHHHHHhCCCCCHHHHHHHhhhhHHHHHHhCCCCCCCCCCCCCCCCCCCCC
Q 006889 166 EAAADAIKAGLDLDCGP--------FLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLGPRDVC 237 (627)
Q Consensus 166 ~a~~~al~AG~D~~~~~--------~~~~~l~~av~~G~~~~~~id~av~Ril~~k~~lGlf~~~p~~~~~~~~~~~~v~ 237 (627)
++++|++||+||+|+. ++.+.|.+||++|+|+++|||+||+|||++|+++|+|+ +++.. ... ....
T Consensus 242 -~~~~ai~AG~D~~m~~~~~~~~~~~~~~~l~~av~~G~i~~~~id~av~RIL~~k~~lg~~~-~~~~~--~~~--~~~~ 315 (713)
T 3zyz_A 242 -TTVQSANSGLDMSMPGTDFNGNNRLWGPALTNAVNSNQVPTSRVDDMVTRILAAWYLTGQDQ-AGYPS--FNI--SRNV 315 (713)
T ss_dssp -CSHHHHHHTCCBBSSSSCTTSCCCCSTHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTS-TTCCC--CCT--TSCC
T ss_pred -HHHHHHHcCCCEeCCCCcccchhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCcc-cCCCC--ccc--cccc
Confidence 3478999999999963 24478999999999999999999999999999999997 44321 111 1223
Q ss_pred CHHHHHHHHHHHhccceeeccCCcCCCccCCCCcEEEEEccCCcccc-----------------ccccccc--cCCCCcC
Q 006889 238 TPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTV-----------------TMIGNYA--GVACGYT 298 (627)
Q Consensus 238 ~~~~~~la~e~A~eSiVLLKN~~~~LPL~~~~~~~vaviG~~a~~~~-----------------~~~G~~~--g~~~~~~ 298 (627)
+++|+++|+++|+||||||||++++|||++. +||+||||+|.... ...|+++ ..+.+.+
T Consensus 316 ~~~h~~la~~~a~~sivLLKN~~~~LPL~~~--~~IaViG~~A~~~~~G~~~~~~~~~~~~~~~~~~g~gs~~~~~~~~~ 393 (713)
T 3zyz_A 316 QGNHKTNVRAIARDGIVLLKNDANILPLKKP--ASIAVVGSAAIIGNHARNSPSCNDKGCDDGALGMGWGSGAVNYPYFV 393 (713)
T ss_dssp CTTTHHHHHHHHHHTCEEEEEGGGCCSCCCC--SEEEEESGGGSCCTTTTTCTTSGGGCCCCSSCCCCBSTTCCCCSCCC
T ss_pred CHHHHHHHHHhhhcceEEEccCCCccccCCC--CEEEEECCCccccccccccccccccccccCceecccCCCCcCcCCCC
Confidence 6799999999999999999999999999864 79999999987421 0112222 3456788
Q ss_pred CHHHHHHHhhceeeeccCCccccCCccchHHHHHHhhcCCEEEEEecCCcccccccC--------CCCCCCCChhHHHHH
Q 006889 299 TPLQGISRYAKTIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFI--------DRAGLLLPGRQQELV 370 (627)
Q Consensus 299 t~~~~l~~~~~~~y~~g~~~~~~~~~~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~--------Dr~~l~L~~~q~~Li 370 (627)
+++++|+++... .|+. +.......+++|+++|+++|++|||+|.. ++||. ||.+|.||+.|.+||
T Consensus 394 t~~~~i~~~~~~---~g~~-v~~~~~~~~~~a~~~A~~aDv~Iv~vg~~---~gEg~~~~~g~~gDR~~l~Lp~~Q~~Li 466 (713)
T 3zyz_A 394 APYDAINTRASS---QGTQ-VTLSNTDNTSSGASAARGKDVAIVFITAD---SGEGYITVEGNAGDRNNLDPWHNGNALV 466 (713)
T ss_dssp CHHHHHHHHHHT---TTCE-EEEECSCCHHHHHHHHTTCSEEEEEEEEC---CBCTTCCBTTBCSSCSCSSCSTTHHHHH
T ss_pred CHHHHHHHHhcc---CCeE-EEEeCCccHHHHHHHhhcCCEEEEEeccc---CCCCccccccCCCCcccccCChhHHHHH
Confidence 999999987421 1111 00111235788999999999999999854 46666 999999999999999
Q ss_pred HHHHHhcCCCEEEEEecCcceec-ccccCCCCccEEEEccCCcchhHHHHHHHHhCCCCC-CCCccccCcccccCCCCCc
Q 006889 371 SRVAKASRGPVVLVLMCGGPVDV-SFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRANP-GKLPMTWYPQDYVSRLPMT 448 (627)
Q Consensus 371 ~~v~~~~~kpvVVVl~~g~P~~l-~~~~~~~~v~Ail~a~~~G~e~g~AlAdVL~G~~nP-GkLPvT~~p~~~~~~~p~~ 448 (627)
++|++. ++|+|||+++|+|++| +|+ +.++++|||++|||||++|+||||||||++|| ||||+|| |++. +|+|..
T Consensus 467 ~~v~~~-~~~~VVVl~sG~p~~~~~w~-~~~~v~Ail~aw~pGqegG~AiAdvL~G~~nPSGkLP~T~-p~~~-~d~p~~ 542 (713)
T 3zyz_A 467 QAVAGA-NSNVIVVVHSVGAIILEQIL-ALPQVKAVVWAGLPSQESGNALVDVLWGDVSPSGKLVYTI-AKSP-NDYNTR 542 (713)
T ss_dssp HHHHHH-CSCEEEEEEESSCCCCHHHH-TCTTEEEEEECCCCGGGHHHHHHHHHTTSSCCCCCCSSCB-CSCG-GGSSCC
T ss_pred HHHHHh-CCCeEEEEecCCcccchhhh-hccccCEEEEcCCCCchhhheehhhhcCCcCCCccCccee-cCCh-hhCCCc
Confidence 999975 5799999999999999 776 45789999999999999999999999999999 9999997 8876 778843
Q ss_pred cccccccCCCCC---CccccCCC---CcccccCcCCCCCCceeCCCccCCCccccccccccccccccccccccccc-ccC
Q 006889 449 DMRMRAARGYPG---RTYRFYKG---PVVFPFGHGMSYTTFAHTLSKAPNQFSVPIATSLYAFKNTTISSNAIRVA-HTN 521 (627)
Q Consensus 449 ~~~~~~~~~~~~---~~Yr~~~~---~~~ypFG~GLSYTtF~ys~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 521 (627)
. +..+...|.+ ++||||+. +|+||||||||||||+|++++++..... . +....+..+ ...
T Consensus 543 ~-~~~~~~~y~eg~~vgYRy~d~~~~~plypFG~GLSYTtF~ys~l~~~~~~~~---~---------~~~~~~~~gg~~~ 609 (713)
T 3zyz_A 543 I-VSGGSDSFSEGLFIDYKHFDDANITPRYEFGYGLSYTKFNYSRLSVLSTAKS---G---------PATGAVVPGGPSD 609 (713)
T ss_dssp C-CCSSEECCTTTTCCHHHHHHHTTCCCSBCTTCCBCSSCEEEEEEEEEECCCC---E---------ECCSCEETTEETT
T ss_pred c-ccCCccccCCCCccCceeccCCCCceeecCCCCCCcccEEEeeeEecccccc---C---------ccccccccccccc
Confidence 1 1111223433 58999985 7999999999999999999986421000 0 000000000 000
Q ss_pred CCCCceEEEEEEEEeCCCCCcceEEEEEEeCCCCC-CCcchhhccccccccCCCCeEEEEEEecCCCCceEEeCC-CCEE
Q 006889 522 CNDAMSLGLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDKF-GIRR 599 (627)
Q Consensus 522 ~~~~~~~~v~v~VtNtG~~~G~evvQlY~~~p~~~-~~P~k~L~gF~kv~l~pGes~~V~~~l~~~~~ls~~d~~-~~~~ 599 (627)
+.+. .++|+|+|||||+++|+||||||+++|.++ .+|.||||||+||+|+||||++|+|+|++ ++|++||.. ++|+
T Consensus 610 ~~~~-~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~-~~ls~~d~~~~~w~ 687 (713)
T 3zyz_A 610 LFQN-VATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRGFAKLNLTPGQSGTATFNIRR-RDLSYWDTASQKWV 687 (713)
T ss_dssp TTSE-EEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEEEEEEEECTTCEEEEEEEEEG-GGGCEEETTTTEEE
T ss_pred ccCC-eEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhhcccceeCCCCeEEEEEEEcH-HHeeeeecCCCeEE
Confidence 1122 699999999999999999999999999887 89999999999999999999999999998 999999986 7899
Q ss_pred ecCeEEEEEEeCCCceEEEEEEEc
Q 006889 600 IPMGEHSLHIGDLKHSISLQANLE 623 (627)
Q Consensus 600 ~~~G~y~i~vG~ss~~~~~~~~~~ 623 (627)
+|+|+|+|+||.||++++++..++
T Consensus 688 ve~G~y~v~vG~sS~d~~l~~~~~ 711 (713)
T 3zyz_A 688 VPSGSFGISVGASSRDIRLTSTLS 711 (713)
T ss_dssp ECCEEEEEEEESSSSCEEEEEEEE
T ss_pred EcCceEEEEEECCCCCcceeEEEE
Confidence 999999999999999999887653
No 2
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=100.00 E-value=1.2e-132 Score=1156.49 Aligned_cols=545 Identities=30% Similarity=0.472 Sum_probs=474.0
Q ss_pred ccee-eCccccccCCCCCCcccccCCCCHHHHHHHHHHHHHHHhcCCCCCCceEEeecccccccCCCCCCCCcccccccC
Q 006889 8 GLTY-WSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNARV 86 (627)
Q Consensus 8 G~~~-~aP~~di~r~p~~gr~~e~fgeDP~l~~~~a~a~v~GlQ~~~~~~~gv~a~~KHF~g~g~~~~~~~~r~~~~~~~ 86 (627)
|+|+ |||++||.|||+|||++|||||||+|+++|+.|+|+|||++ ||+||+||||||+++. +|...++++
T Consensus 94 Gi~~~laP~vdi~r~P~~gR~~EsfgeDP~lv~~~a~a~v~GlQ~~-----gV~a~~KHFpg~g~e~----~r~~~~~~v 164 (845)
T 3abz_A 94 NAAVILGPTTNMQRGPLGGRGFESFSEDPYLAGMATSSVVKGMQGE-----GIAATVKHFVCNDLED----QRFSSNSIV 164 (845)
T ss_dssp TCSEEECCBCCCCSSTTCTTGGGSCCSSHHHHHHHHHHHHHHHHHT-----TCBCEEEEETTCCCCT----TTTTCEEEC
T ss_pred CCCEEecceECCCcCCCCCcccccCCCCHHHHHHHHHHHHHHHhhC-----CeeEEeeccccCCccc----CCccccCCC
Confidence 8999 99999999999999999999999999999999999999998 8999999999998653 577778899
Q ss_pred CHHHHHHhccHHHHHHHHcCCCceEEeccccCCCcccccCHHHHHHHHhhhcCCCeEEEcChhhhhhhhccccccCChHH
Q 006889 87 SKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEE 166 (627)
Q Consensus 87 ~~~~l~e~~l~pF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~~LR~e~gf~G~v~SD~~~~~~~~~~~~~~~~~~~ 166 (627)
++++|+|+||+||+++|+++++.+||||||++||+|||+|+++|++|||+||||+|+|||||++|.
T Consensus 165 ~~~~L~e~~L~PF~~ai~~ag~~~VM~syn~ing~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~-------------- 230 (845)
T 3abz_A 165 SERALREIYLEPFRLAVKHANPVCIMTAYNKVNGEHCSQSKKLLIDILRDEWKWDGMLMSDWFGTY-------------- 230 (845)
T ss_dssp CHHHHHHTTSHHHHHHHHHHCCSEEEECSSEETTEEGGGCHHHHTCCCCCCTCCCSEEECCTTCCC--------------
T ss_pred CHHHHHHhhHHHHHHHHHhcCCCEEEecCCCcCCEeccCCHHHHHHHHhhccCCCeEEEcccccHH--------------
Confidence 999999999999999997555999999999999999999999999999999999999999998763
Q ss_pred HHHHHHHcCCCcCChh---hH-HHHHHHHHhCCC-CCHHHHHHHhhhhHHHHHHhC----CCCCCCCCCCCCCCCCCCCC
Q 006889 167 AAADAIKAGLDLDCGP---FL-AIHTEGAVRGGL-LREEDVNLALAYTITVQMRLG----MFDGEPSAQPFGNLGPRDVC 237 (627)
Q Consensus 167 a~~~al~AG~D~~~~~---~~-~~~l~~av~~G~-~~~~~id~av~Ril~~k~~lG----lf~~~p~~~~~~~~~~~~v~ 237 (627)
++++|++||+||+|+. ++ .+.|.+||++|+ +++++||+||+|||++|+++| +|+ +|+..+ ....++
T Consensus 231 ~~~~Al~AG~D~~m~~~~~~~~~~~l~~av~~G~~i~~~~id~av~RIL~~k~~~g~l~~~~~-~p~~~~----~~~~~~ 305 (845)
T 3abz_A 231 TTAAAIKNGLDIEFPGPTRWRTRALVSHSLNSREQITTEDVDDRVRQVLKMIKFVVDNLEKTG-IVENGP----ESTSNN 305 (845)
T ss_dssp CSHHHHHHTCCBBCSSSCSSCCHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHHTHHHHC-CCTTCC----CCCTTC
T ss_pred HHHHHHHcCCCcccCCchhhhHHHHHHHHHHcCccchHHHHHHHHHHHHHHHHHhCCcccccc-CCccCc----cccccC
Confidence 2478999999999962 22 348999999999 999999999999999999999 898 554221 122478
Q ss_pred CHHHHHHHHHHHhccceeeccCCcCCCccCCCCcEEEEEccCCcccccccccccc-CCCCcCCHHHHHHHhh--ceeeec
Q 006889 238 TPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYAG-VACGYTTPLQGISRYA--KTIHQA 314 (627)
Q Consensus 238 ~~~~~~la~e~A~eSiVLLKN~~~~LPL~~~~~~~vaviG~~a~~~~~~~G~~~g-~~~~~~t~~~~l~~~~--~~~y~~ 314 (627)
+++|+++|+++|++|||||||++++|||++ .+||+||||+|+....++|++.. .+.+.+++++||+++. .+.|..
T Consensus 306 ~~~~~~la~~~a~~sivLLKN~~~~LPL~~--~~~iaviGp~A~~~~~~Gggs~~~~~~~~vtpl~gi~~~~~~~v~y~~ 383 (845)
T 3abz_A 306 TKETSDLLRKIAADSIVLLKNKNNILPLKK--EDNIIVIGPNAKAKTSSGGGSASMNSYYVVSPYEGIVNKLGKEVDYTV 383 (845)
T ss_dssp SHHHHHHHHHHHHHHCEEEEECTTCCSCCT--TSCEEEESTTTSCCCCSCBSTTCCCBSCCCCHHHHHHHHHTSCCEEEC
T ss_pred CHHHHHHHHHHHHhCcEEeccCCcccCCCC--CCEEEEEcCCcchhhccCCCccCcccCCcCCHHHHHHHhhcCceeecc
Confidence 999999999999999999999999999975 37999999999998766665544 5778899999999874 244554
Q ss_pred cCCcc------------------------------------c--------------------------------------
Q 006889 315 GCFGV------------------------------------A-------------------------------------- 320 (627)
Q Consensus 315 g~~~~------------------------------------~-------------------------------------- 320 (627)
||... .
T Consensus 384 G~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (845)
T 3abz_A 384 GAYSHKSIGGLAESSLIDAAKPADAENSGLIAKFYSNPVEERSDDEEPFHVTKVNRSNVHLFDFKHEKVDPKNPYFFVTL 463 (845)
T ss_dssp CCCCCSSCCBSGGGEESSTTSCSCTTTBSEEEEEESSCTTTSCTTCCCSEEEEECSSEEECTTCCCTTSBTTBCCCEEEE
T ss_pred ccccccccccccccccccccccccCCCCceEEEEeccCcccCcccccceeeeeccccceeecccccccccccccceeEEE
Confidence 44200 0
Q ss_pred ---------------------------------------------------------------------c----------
Q 006889 321 ---------------------------------------------------------------------C---------- 321 (627)
Q Consensus 321 ---------------------------------------------------------------------~---------- 321 (627)
+
T Consensus 464 ~~~~~~~~~g~~~~~~~~~g~~~l~idg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~y~~~v~~~~~~~~~~~~ 543 (845)
T 3abz_A 464 TGQYVPQEDGDYIFSLQVYGSGLFYLNDELIIDQKHNQERGSFCFGAGTKERTKKLTLKKGQVYNVRVEYGSGPTSGLVG 543 (845)
T ss_dssp EEEECCSSSEEEEEEEEEESEEEEEETTEEEEEESSSCCBCSTTTTTSBCCEEEEEEECTTCCEEEEEEEECTTTSCCSS
T ss_pred EEEEecCCCccEEEEEeecCceEEEECCEEEeeccccccccccccccCcccceeEEEecCCceeeEEEEeccCCcccccc
Confidence 0
Q ss_pred --------------CC-ccchHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhHHHHHHHHHHhcCCCEEEEEe
Q 006889 322 --------------NG-NQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLM 386 (627)
Q Consensus 322 --------------~~-~~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q~~Li~~v~~~~~kpvVVVl~ 386 (627)
.+ ...+++|+++|++||++|||+|.++..++||.||.+|.||+.|.+||++|+++ ++|||||++
T Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~~Av~~A~~ADvvVv~vG~~~~~e~Eg~DR~~l~LP~~Q~~LI~aV~a~-~~~tVVVl~ 622 (845)
T 3abz_A 544 EFGAGGFQAGVIKAIDDDEEIRNAAELAAKHDKAVLIIGLNGEWETEGYDRENMDLPKRTNELVRAVLKA-NPNTVIVNQ 622 (845)
T ss_dssp CCCCCEEEEEEEECCCHHHHHHHHHHHHHTSSEEEEEEECCTTTSBTTBCCSSSCCCTTHHHHHHHHHHH-CSCEEEEEE
T ss_pred cccccceeecccccccchhhHHHHHHHHhcCCEEEEEEecCCccccccCCcccccCCHHHHHHHHHHHHh-CCCEEEEEe
Confidence 00 12366788999999999999999999999999999999999999999999975 579999999
Q ss_pred cCcceecccccCCCCccEEEEccCCcchhHHHHHHHHhCCCCC-CCCccccCcccccCCCCCcc-ccccc-cCCCCC---
Q 006889 387 CGGPVDVSFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRANP-GKLPMTWYPQDYVSRLPMTD-MRMRA-ARGYPG--- 460 (627)
Q Consensus 387 ~g~P~~l~~~~~~~~v~Ail~a~~~G~e~g~AlAdVL~G~~nP-GkLPvT~~p~~~~~~~p~~~-~~~~~-~~~~~~--- 460 (627)
+|+|++|+|+. +++|||++||||||+|+||||||||++|| ||||+|| |++. +|+|.++ +.... ...|.+
T Consensus 623 sG~pv~m~w~~---~v~AIL~aw~pGqegG~AiAdVLfG~vNPSGkLP~T~-p~~~-~d~P~~~~~~~~~g~~~y~eg~~ 697 (845)
T 3abz_A 623 SGTPVEFPWLE---DANALVQAWYGGNELGNAIADVLYGDVVPNGKLSLSW-PFKL-QDNPAFLNFKTEFGRVIYGEDIF 697 (845)
T ss_dssp CSSCCCCTTGG---GCSEEEECCCCCTTHHHHHHHHHTTSSCCCCCCSSCB-CSSG-GGSTTTTSCSCBTTEEECTTTTC
T ss_pred CCCcccCcchh---ccCeEEEcCCCcHHHHHHHHHHhcCCcCCCCCCceee-eCch-hhCCccccCCCCCCceeccCCcc
Confidence 99999999983 79999999999999999999999999999 9999997 8887 7888642 21100 111221
Q ss_pred CccccCC---CCcccccCcCCCCCCceeC--CCccCCCcccccccccccccccccccccccccccCCCCCceEEEEEEEE
Q 006889 461 RTYRFYK---GPVVFPFGHGMSYTTFAHT--LSKAPNQFSVPIATSLYAFKNTTISSNAIRVAHTNCNDAMSLGLHVDIK 535 (627)
Q Consensus 461 ~~Yr~~~---~~~~ypFG~GLSYTtF~ys--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Vt 535 (627)
.+||||+ .+|+||||||||||||+|+ +++++ +. .++|+|+||
T Consensus 698 vgYR~y~~~~~~plfPFG~GLSYTtF~ys~~~l~v~--------------------------------~~-~~~v~v~V~ 744 (845)
T 3abz_A 698 VGYRYYEKLQRKVAFPFGYGLSYTTFELDISDFKVT--------------------------------DD-KIAISVDVK 744 (845)
T ss_dssp CTHHHHHHHTCCCSBCTTCCBCSSCEEEEEEEEEEC--------------------------------SS-EEEEEEEEE
T ss_pred CCCcchhcCCCceeecccCCCcceeEEEeccccccc--------------------------------CC-eEEEEEEEE
Confidence 3699997 5899999999999999999 88731 11 689999999
Q ss_pred eCC-CCCcceEEEEEEeCCCCC-CCcchhhccccccccCCCCeEEEEEEec-CCCCceEEeCC-CCEEecCeEEEEEEeC
Q 006889 536 NTG-DMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIH-VCKHLSVVDKF-GIRRIPMGEHSLHIGD 611 (627)
Q Consensus 536 NtG-~~~G~evvQlY~~~p~~~-~~P~k~L~gF~kv~l~pGes~~V~~~l~-~~~~ls~~d~~-~~~~~~~G~y~i~vG~ 611 (627)
||| +++|+||||||+++|.++ .+|.||||||+||+|+||||++|+|+|+ . ++|++||.+ ++|++|+|+|+|+||.
T Consensus 745 NtG~~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~~-~~l~~~d~~~~~~~~e~G~y~v~vG~ 823 (845)
T 3abz_A 745 NTGDKFAGSEVVQVYFSALNSKVSRPVKELKGFEKVHLEPGEKKTVNIDLELK-DAISYFNEELGKWHVEAGEYLVSVGT 823 (845)
T ss_dssp ECCSSCCEEEEEEEEEEESSCSSCCCSCEEEEEEEEEECTTCEEEEEEEEEHH-HHHCEEETTTTEEEECSEEEEEEEES
T ss_pred ECCcCCCcceeeeeeEeCCCCCcchhhheeccceeEEECCCCEEEEEEEeCCh-HHeeEEecCCCeEEEcCCEEEEEEEC
Confidence 999 999999999999999876 8999999999999999999999999999 8 899999996 7899999999999999
Q ss_pred CCceEEEEEEE
Q 006889 612 LKHSISLQANL 622 (627)
Q Consensus 612 ss~~~~~~~~~ 622 (627)
||++++++..+
T Consensus 824 ss~di~l~~~~ 834 (845)
T 3abz_A 824 SSDDILSVKEF 834 (845)
T ss_dssp STTCEEEEEEE
T ss_pred CCCCceeEEEE
Confidence 99998876544
No 3
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=100.00 E-value=2.6e-131 Score=1136.24 Aligned_cols=538 Identities=29% Similarity=0.441 Sum_probs=466.5
Q ss_pred ccee-eCccccccCCCCCCcccccCCCCHHHHHHHHHHHHHHHhcCCCCCCceEEeecccccccCCCCCCCCcccccccC
Q 006889 8 GLTY-WSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNARV 86 (627)
Q Consensus 8 G~~~-~aP~~di~r~p~~gr~~e~fgeDP~l~~~~a~a~v~GlQ~~~~~~~gv~a~~KHF~g~g~~~~~~~~r~~~~~~~ 86 (627)
|+|+ |||++||.|||+|||++|||||||+|+++|+.|+|+|||+. ||+||+|||||||++ ..|...++++
T Consensus 111 Gi~~~~aP~vdi~r~p~~gR~~e~fgeDP~l~~~~a~a~v~G~q~~-----gV~a~~KHF~g~g~e----~~r~~~ds~~ 181 (721)
T 2x41_A 111 GVDVLLAPAMNIHRNPLCGRNFEYYSEDPVLSGEMASSFVKGVQSQ-----GVGACIKHFVANNQE----TNRMVVDTIV 181 (721)
T ss_dssp TCSEECCCBCCCCCSTTCTTGGGSCCSSHHHHHHHHHHHHHHHHTT-----TCBCEEEEETTCCCC----TTTTTCEEEC
T ss_pred CCCEEeeceECCCCCCCCCcccccCCCCHHHHHHHHHHHHHHhhhC-----CeEEEecccccCCCC----CCCCcccCCC
Confidence 9999 99999999999999999999999999999999999999998 899999999999965 3577788899
Q ss_pred CHHHHHHhccHHHHHHHHcCCCceEEeccccCCCcccccCHHHHHHHHhhhcCCCeEEEcChhhhhhhhccccccCChHH
Q 006889 87 SKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEE 166 (627)
Q Consensus 87 ~~~~l~e~~l~pF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~~LR~e~gf~G~v~SD~~~~~~~~~~~~~~~~~~~ 166 (627)
++++|+|+||+||+++|+++++.+||||||.+||+|||+|+++|++|||+||||+|+|||||+++.
T Consensus 182 ~~~~l~e~~l~pF~~ai~~a~~~~vM~sy~~i~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~-------------- 247 (721)
T 2x41_A 182 SERALREIYLRGFEIAVKKSKPWSVMSAYNKLNGKYCSQNEWLLKKVLREEWGFEGFVMSDWYAGD-------------- 247 (721)
T ss_dssp CHHHHHHTHHHHHHHHHHHHCCSEEEECSSEETTEEGGGCHHHHTCCCCCCTCCCSEEEECTTCSS--------------
T ss_pred CHHHHHhhhHHHHHHHHHhcCCCEEEecCCCCCCccccCCHHHHHHHHHHhcCCCEEEEccCchHH--------------
Confidence 999999999999999999555999999999999999999999999999999999999999998762
Q ss_pred HHHHHHHcCCCcCChh--hH--------HHHHHHHHhCCCCCHHHHHHHhhhhHHHHHHhCCCCCCCCCCCCCCCCCCCC
Q 006889 167 AAADAIKAGLDLDCGP--FL--------AIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLGPRDV 236 (627)
Q Consensus 167 a~~~al~AG~D~~~~~--~~--------~~~l~~av~~G~~~~~~id~av~Ril~~k~~lGlf~~~p~~~~~~~~~~~~v 236 (627)
++++|++||+||+|+. .+ .+.|.+||++|+|++++||+||+|||++|+++|+|+ +|.. ...+
T Consensus 248 ~~~~al~AG~D~~m~~~~~~~~~~~~~~~~~l~~av~~G~i~~~~id~av~Ril~~k~~~gl~~-~~~~-------~~~~ 319 (721)
T 2x41_A 248 NPVEQLKAGNDLIMPGKAYQVNTERRDEIEEIMEALKEGKLSEEVLDECVRNILKVLVNAPSFK-NYRY-------SNKP 319 (721)
T ss_dssp CHHHHHHHTCCBBCSCCGGGTCTTCCCHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHTTSGGGG-TCCC-------CSCC
T ss_pred HHHHHHHcCCCcccCCCcccccchhHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHhCCCC-CCCc-------cccc
Confidence 3688999999999853 22 278999999999999999999999999999999998 4421 2346
Q ss_pred CCHHHHHHHHHHHhccceeeccCCcCCCccCCCCcEEEEEccCCcccccccc-ccccCCCCcCCHHHHHHHh-hc-----
Q 006889 237 CTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIG-NYAGVACGYTTPLQGISRY-AK----- 309 (627)
Q Consensus 237 ~~~~~~~la~e~A~eSiVLLKN~~~~LPL~~~~~~~vaviG~~a~~~~~~~G-~~~g~~~~~~t~~~~l~~~-~~----- 309 (627)
++++|+++|+++|+||||||||++ +|||++. +||+||||++......++ ++...+.+.++++++|+++ ..
T Consensus 320 ~~~~h~~la~~~A~esiVLLKN~~-~LPL~~~--~kIaviG~~A~~~~~~g~gs~~~~~~~~vt~~~gl~~~G~~~~~~~ 396 (721)
T 2x41_A 320 DLEKHAKVAYEAGAEGVVLLRNEE-ALPLSEN--SKIALFGTGQIETIKGGTGSGDTHPRYAISILEGIKERGLNFDEEL 396 (721)
T ss_dssp CHHHHHHHHHHHHHHHCEEEEESS-CCSCCTT--CCEEEESGGGTSCCCSCBSTTCCCCSCCCCHHHHHHHTTCCBCHHH
T ss_pred CCHHHHHHHHHHHHhchhhhcCCC-cCCCCCC--CEEEEEecCCcCccccCCCCCCcCcCCCCCHHHHHHHhccCCCCce
Confidence 789999999999999999999998 9999864 799999999988765432 2334567789999999987 32
Q ss_pred -eeee-------------cc---CCcc--ccCCccch--HHHHHHhhcCCEEEEEecCCcccccccCCCC----CCCCCh
Q 006889 310 -TIHQ-------------AG---CFGV--ACNGNQLI--GAAEVAARQADATVLVMGLDQSIEAEFIDRA----GLLLPG 364 (627)
Q Consensus 310 -~~y~-------------~g---~~~~--~~~~~~~~--~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~----~l~L~~ 364 (627)
+.|. .| +... ...+...+ ++++++|+++|++||++|.+ ++||.||. +|.||+
T Consensus 397 ~v~y~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~a~~~a~~aDvvIv~vg~~---~gEg~Dr~~~~~~l~Lp~ 473 (721)
T 2x41_A 397 AKTYEDYIKKMRETEEYKPRRDSWGTIIKPKLPENFLSEKEIHKLAKKNDVAVIVISRI---SGEGYDRKPVKGDFYLSD 473 (721)
T ss_dssp HHHHHHHHHHHHHSTTTSCBC-----CBCCCCCSCCSCHHHHHHHHHHCSEEEEEEECC---CBTTCCCCSSBTTTBCCH
T ss_pred EEEEeecccccccccccCCCccceeccccCCCchhhhcHHHHHHHHhcCCEEEEEEecc---ccccccccCCCCCccCCH
Confidence 3455 44 3110 11223455 78899999999999999976 78999999 999999
Q ss_pred hHHHHHHHHH----HhcCCCEEEEEecCcceec-ccccCCCCccEEEEccCCcchhHHHHHHHHhCCCCC-CCCccccCc
Q 006889 365 RQQELVSRVA----KASRGPVVLVLMCGGPVDV-SFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRANP-GKLPMTWYP 438 (627)
Q Consensus 365 ~q~~Li~~v~----~~~~kpvVVVl~~g~P~~l-~~~~~~~~v~Ail~a~~~G~e~g~AlAdVL~G~~nP-GkLPvT~~p 438 (627)
.|.+||++|+ + .++|+|||+++|+|++| +|. ++++|||++|+||+++|+|+||||||++|| ||||+|| |
T Consensus 474 ~q~~LI~~v~~~~~~-~~~~vVVVl~~g~P~~l~~~~---~~v~AiL~a~~pG~egg~AlAdVL~G~vnPSGkLPvT~-p 548 (721)
T 2x41_A 474 DETDLIKTVSREFHE-QGKKVIVLLNIGSPVEVVSWR---DLVDGILLVWQAGQETGRIVADVLTGRINPSGKLPTTF-P 548 (721)
T ss_dssp HHHHHHHHHHHHHHH-TTCCEEEEEECSSCCCCTTTG---GGCSEEEECCCCGGGHHHHHHHHHHTSSCCCCCCSSCE-E
T ss_pred HHHHHHHHHHHHHHH-hCCCEEEEEecCCceEccchh---hcCCEEEEcCCCchhHHHHHHHHHcCCCCCCCCCceee-c
Confidence 9999999998 6 46799999999999999 765 479999999999999999999999999999 9999997 9
Q ss_pred ccccCCCCCcccccccc-----CCCCC---CccccCC---CCcccccCcCCCCCCceeCCCccCCCcccccccccccccc
Q 006889 439 QDYVSRLPMTDMRMRAA-----RGYPG---RTYRFYK---GPVVFPFGHGMSYTTFAHTLSKAPNQFSVPIATSLYAFKN 507 (627)
Q Consensus 439 ~~~~~~~p~~~~~~~~~-----~~~~~---~~Yr~~~---~~~~ypFG~GLSYTtF~ys~~~~~~~~~~~~~~~~~~~~~ 507 (627)
+++ +++|..++...+. ..|.+ .+||||| .+|+||||||||||||+|++++++.
T Consensus 549 ~~~-~~~p~~~~~~~~~~~~~~~~y~eg~~vgYry~d~~~~~plypFG~GLSYTtF~ys~~~~~~--------------- 612 (721)
T 2x41_A 549 RDY-SDVPSWTFPGEPKDNPQKVVYEEDIYVGYRYYDTFGVEPAYEFGYGLSYTTFEYSDLNVSF--------------- 612 (721)
T ss_dssp SSG-GGCSCTTTTCBSTTSCSEEECTTTTCCTHHHHHHHTCCEEECTTCCBCSSCEEEEEEEEEE---------------
T ss_pred Ccc-ccCccccCCCCCccccccccccCCcccccceeecCCCceeeccCCCCCcceeEeeceEeec---------------
Confidence 887 7888722221111 12332 3799997 4799999999999999999987521
Q ss_pred cccccccccccccCCCCCceEEEEEEEEeCCCCCcceEEEEEEeCCCCC-CCcchhhcccccc-ccCCCCeEEEEEEecC
Q 006889 508 TTISSNAIRVAHTNCNDAMSLGLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKV-HVTAGALQSVRLDIHV 585 (627)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~v~v~VtNtG~~~G~evvQlY~~~p~~~-~~P~k~L~gF~kv-~l~pGes~~V~~~l~~ 585 (627)
. +. .++|+|+|||||+++|+||||||+++|.++ .+|.||||||+|| +|+||||++|+|+|++
T Consensus 613 ----------~-----~~-~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~~L~pGes~~V~~~l~~ 676 (721)
T 2x41_A 613 ----------D-----GE-TLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKAFHKTRLLNPGESEEVVLEIPV 676 (721)
T ss_dssp ----------C-----SS-EEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEEEEEEECCCBCTTCEEEEEEEEEG
T ss_pred ----------C-----CC-eEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHhhcccccccCCCCCeEEEEEEECH
Confidence 1 12 699999999999999999999999999876 8999999999999 9999999999999999
Q ss_pred CCCceEEeCCCCEEecCeEEEEEEeCCCceEEEEEE
Q 006889 586 CKHLSVVDKFGIRRIPMGEHSLHIGDLKHSISLQAN 621 (627)
Q Consensus 586 ~~~ls~~d~~~~~~~~~G~y~i~vG~ss~~~~~~~~ 621 (627)
++|++|| .++|++|+|+|+|+||+||++++++..
T Consensus 677 -~~l~~~d-~~~~~~e~G~y~v~vG~ss~d~~~~~~ 710 (721)
T 2x41_A 677 -RDLASFN-GEEWVVEAGEYEVRVGASSRNIKLKGT 710 (721)
T ss_dssp -GGGCEEC-SSCEEECCEEEEEEEEEETTEEEEEEE
T ss_pred -HHhcEEc-CCeEEEeCceEEEEEECCCCCcceEEE
Confidence 9999999 999999999999999999999876543
No 4
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A
Probab=100.00 E-value=3.4e-100 Score=873.63 Aligned_cols=430 Identities=26% Similarity=0.411 Sum_probs=363.9
Q ss_pred ccee-eCccccccCCCCCCcccccCCCCHHHHHHHHHHHHHHHhcCC----CCCCceEEeecccccccCCCCCCCCcccc
Q 006889 8 GLTY-WSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNT----GSRLKVAACCKHYTAYDLDNWNGVDRYHF 82 (627)
Q Consensus 8 G~~~-~aP~~di~r~p~~gr~~e~fgeDP~l~~~~a~a~v~GlQ~~~----~~~~gv~a~~KHF~g~g~~~~~~~~r~~~ 82 (627)
|+|+ |+|++||.|||+|||++|+|||||+|+++|+.|||+|||+.. .+..||+||+|||||||... .+|...
T Consensus 154 Gin~~~aPvvDv~rdPr~GR~~EsfGEDP~lv~~~a~A~V~GlQ~~~~~~~~~~~gV~a~~KHFpG~G~~~---~~r~~~ 230 (822)
T 3rrx_A 154 GIEWSFAPTVAVVRDDRWGRTYESYSEDPDLVKRYAGEMVTGIQGDVGADFLKGSNRIATAKHFVGDGGTE---RGVDRG 230 (822)
T ss_dssp TCCEEEEEECCCCSCTTSTTGGGSSCSCHHHHHHHHHHHHHHHHCCSSTTTTCTTCCEEEEEEESCGGGBG---GGCTTC
T ss_pred CCcEeeccccccccCCCcCccccCCCCCHHHHHHHHHHHHHHHhcccccccccCCCeEEEeeeccCCCccc---cCccCc
Confidence 9999 999999999999999999999999999999999999999851 12348999999999998532 245556
Q ss_pred cccCCHHHHHHhccHHHHHHHHcCCCceEEeccccCCCcccccCHHHHHHHHhhhcCCCeEEEcChhhhhhhhccccccC
Q 006889 83 NARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTR 162 (627)
Q Consensus 83 ~~~~~~~~l~e~~l~pF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~~LR~e~gf~G~v~SD~~~~~~~~~~~~~~~ 162 (627)
++.+++++|+|+||+||+++|++| +.+||||||.+||+|+|.|+++|++|||+||||+|+|||||++|+.+..
T Consensus 231 ~~~vs~~~L~e~~L~PF~~aI~ag-~~sVM~syn~vng~pa~~s~~lLtdlLR~e~GF~G~VvSD~~~~~~i~~------ 303 (822)
T 3rrx_A 231 NTLIDEKGLRDIHSAGYFSAINQG-VQSVMASFNSWNGKRVHGDKHLLTDVLKNQLGFDGFVVSDWNAHKFVEG------ 303 (822)
T ss_dssp EECCCHHHHHHTTSHHHHHHHHTT-CSEEEECSSEETTEEGGGCHHHHTCCCCCCSCCCSEEECCTTGGGGSTT------
T ss_pred cCcCCHHHHHHHhhHHHHHHHHcC-CCEEEeccccCCCccccCCHHHHHHHHHHhcCCCeEEecccchhhhhcC------
Confidence 778999999999999999999877 8999999999999999999999999999999999999999999987643
Q ss_pred ChHHHHHHHHHcCCCcCChh----hHHHHHHHHHhCCCCCHHHHHHHhhhhHHHHHHhCCCCCCCCCC--CCCCCCCCCC
Q 006889 163 TPEEAAADAIKAGLDLDCGP----FLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQ--PFGNLGPRDV 236 (627)
Q Consensus 163 ~~~~a~~~al~AG~D~~~~~----~~~~~l~~av~~G~~~~~~id~av~Ril~~k~~lGlf~~~p~~~--~~~~~~~~~v 236 (627)
+..+++++|++||+||+|.+ .+.+.|.+||++|+|+++|||+||+|||++|+++|||+ +|+.. ++.. ....+
T Consensus 304 ~~~ea~~~Al~AG~Dm~m~~~~~~~~~~~l~~aV~~G~i~e~rID~av~RIL~~K~~lGLfd-~p~~~~~~~~~-~~~~v 381 (822)
T 3rrx_A 304 CDLEQCAQAINAGVDVIMVPEHFEAFYHNTVKQVKAGVIAESRINDAVRRFLRAKIRWGVFT-KSKPSARPESQ-HPQWL 381 (822)
T ss_dssp CBTTBCHHHHHHTCCBEECTTTHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHTTTT-SCCGGGSGGGS-CGGGT
T ss_pred ChHHHHHHHHHcCCCEECCCccHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCCCC-CCCcccccccc-ccccc
Confidence 23456789999999999964 24578999999999999999999999999999999999 55421 1111 12357
Q ss_pred CCHHHHHHHHHHHhccceeeccCCcCCCccCCCCcEEEEEccCCccccccccccc----c------CCCCcCCHHHHHHH
Q 006889 237 CTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYA----G------VACGYTTPLQGISR 306 (627)
Q Consensus 237 ~~~~~~~la~e~A~eSiVLLKN~~~~LPL~~~~~~~vaviG~~a~~~~~~~G~~~----g------~~~~~~t~~~~l~~ 306 (627)
++++|+++|+++|+||||||||++++|||++. +||+||||+|++...+.|+|+ | ...+.++++++|++
T Consensus 382 ~~~eh~~lAre~A~eSiVLLKN~~~~LPL~~~--~~IaViGp~A~~~~~~~Ggws~~~~G~gs~~~~~~~~~t~l~gi~~ 459 (822)
T 3rrx_A 382 GAAEHRTLAREAVRKSLVLLKNNESILPIKAS--SRILVAGKGANAINMQAGGWSVSWQGTDNTNSDFPNATSIFSGLQS 459 (822)
T ss_dssp TCHHHHHHHHHHHHHHCEEEEEGGGCCSBCTT--SEEEEESTTTTCHHHHHCSSSSSSSCTTCCGGGSTTCBCHHHHHHH
T ss_pred CCHHHHHHHHHHHHhceEEEecCCCccCCCCC--CeEEEEcCCccchhhccCCcceeccccCCCcCCCCCCCCHHHHHHH
Confidence 89999999999999999999999999999864 799999999998766666653 1 13467899999998
Q ss_pred hhc-----eeeeccCCccccCCccchHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCC---hhHHHHHHHHHHhcC
Q 006889 307 YAK-----TIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLP---GRQQELVSRVAKASR 378 (627)
Q Consensus 307 ~~~-----~~y~~g~~~~~~~~~~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~---~~q~~Li~~v~~~~~ 378 (627)
+.. +.|... .+.++++|++|||+|++...|++| ||.+|.|| +.|.+||++|++ .+
T Consensus 460 ~~~~~~~~v~~~~~---------------~~~a~~aDv~Iv~~Ge~~~~e~~g-Dr~~L~lp~g~~~q~~Li~av~a-~g 522 (822)
T 3rrx_A 460 QVTKAGGKITLSES---------------GEYTSKPDVAIVVIGEEPYAEWFG-DIELLEFQHETKHALALLKQLKA-DN 522 (822)
T ss_dssp HHHHTTCEEEECTT---------------CCCSSCCSEEEEEEECCCCCGGGG-CCSCCBTTTTTCHHHHHHHHHHH-TT
T ss_pred HHHhcCCeEEEccc---------------ccccccCCeEEEEecCCcccccCC-CcccccCCCCChHHHHHHHHHHH-hC
Confidence 752 222210 023679999999999887667666 99999999 689999999986 57
Q ss_pred CCEEEEEecCcceecccccCCCCccEEEEccCCcchhHHHHHHHHhCCC------CC-CCCccccCcccccCCCCCcccc
Q 006889 379 GPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRA------NP-GKLPMTWYPQDYVSRLPMTDMR 451 (627)
Q Consensus 379 kpvVVVl~~g~P~~l~~~~~~~~v~Ail~a~~~G~e~g~AlAdVL~G~~------nP-GkLPvT~~p~~~~~~~p~~~~~ 451 (627)
||||||+++|+|+.|.|+. ++++|||++||||++++ ||||||||++ || ||||+|| |++. +|+|...
T Consensus 523 ~pvVvVl~sGrP~~l~~~~--~~~~Ail~aw~pG~eGg-AiAdVLfG~v~g~~~~nPSGkLP~T~-P~~~-~q~P~~~-- 595 (822)
T 3rrx_A 523 IPVVTVFLSGRPLWVNKEL--NASDAFVAAWLPGSEGE-GVADVLLTNKQGKTQFDFTGKLSFSW-PKYD-DQFTLNL-- 595 (822)
T ss_dssp CCEEEEEECSSCCBCHHHH--HTCSEEEEEECCCSBTH-HHHHHHBBCTTSCBSCCCCCCCSSCB-CSST-TCTTCCT--
T ss_pred CCEEEEEeCCcceeccchh--hhCCeEEEcCCCCchhH-HHHHHHhcccccccccCCCCCCceec-cCCc-ccCCccc--
Confidence 8999999999999996553 47999999999999987 9999999997 99 9999997 9987 8899521
Q ss_pred ccccCCCCCCccccCCCCcccccCcCCCCCCceeCC
Q 006889 452 MRAARGYPGRTYRFYKGPVVFPFGHGMSYTTFAHTL 487 (627)
Q Consensus 452 ~~~~~~~~~~~Yr~~~~~~~ypFG~GLSYTtF~ys~ 487 (627)
++.+| +|+||||||||||||+|..
T Consensus 596 ----------~~~~~--~PlypFG~GLSYt~f~~~~ 619 (822)
T 3rrx_A 596 ----------NDADY--DPLFAYGYGLTYQDNINVP 619 (822)
T ss_dssp ----------TCSSC--CCSBCTTCCBCTTCCCCCC
T ss_pred ----------CCCCC--ccccCCCCCcCCCCCcccc
Confidence 11222 7999999999999999864
No 5
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A*
Probab=100.00 E-value=7.9e-99 Score=850.67 Aligned_cols=430 Identities=26% Similarity=0.417 Sum_probs=368.4
Q ss_pred ccee-eCccccccCCCCCCcccccCCCCHHHHHHHHHHHHHHHhcCCCC-----------CCceEEeecccccccCCCCC
Q 006889 8 GLTY-WSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGS-----------RLKVAACCKHYTAYDLDNWN 75 (627)
Q Consensus 8 G~~~-~aP~~di~r~p~~gr~~e~fgeDP~l~~~~a~a~v~GlQ~~~~~-----------~~gv~a~~KHF~g~g~~~~~ 75 (627)
|+|+ |+|++||.|||+|||++|||||||+|+++|+. +|+|||+.+.. ..||+||+|||||||.++ .
T Consensus 139 Gi~~~~aP~vdv~r~p~~GR~~esfgeDP~lv~~~a~-~v~GlQ~~~~~~~~~~~~~~~~~~gV~a~~KHFpg~g~~~-~ 216 (602)
T 1x38_A 139 GIQYAFAPCIAVCRDPRWGRCYESYSEDRRIVQSMTE-LIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTV-D 216 (602)
T ss_dssp TCCEECCCBCCCCSCTTSTTGGGSSCSSHHHHHHGGG-HHHHHHCCCCTTCCTTCCCCCSTTSCBCEEEEETTGGGCG-G
T ss_pred CCCEEeeceeccccCCCcCccccCcCCCHHHHHHHHH-HHHHhcCCCccccccccccccccCCeEEEeccccCCCccc-c
Confidence 9999 99999999999999999999999999999999 99999983210 138999999999999753 2
Q ss_pred CCCcccccccCCHHHHHHhccHHHHHHHHcCCCceEEeccccCCCcccccCHHHHHHHHhhhcCCCeEEEcChhhhhhhh
Q 006889 76 GVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLY 155 (627)
Q Consensus 76 ~~~r~~~~~~~~~~~l~e~~l~pF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~~LR~e~gf~G~v~SD~~~~~~~~ 155 (627)
++...++.+++++|+|+||+||+++|++| +.+||||||.+||+|+|+|+++|+++||+||||+|+|||||++|.++.
T Consensus 217 --~~~~~~~~~~~~~l~e~~l~pF~~ai~ag-~~~vM~sy~~v~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~~~~ 293 (602)
T 1x38_A 217 --GINENNTIINREGLMNIHMPAYKNAMDKG-VSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRIT 293 (602)
T ss_dssp --GCTTCEECCCHHHHHHHTSHHHHHHHHTT-CCEEEECSSEETTEEGGGCHHHHCCCCCTTSCCCSEEECCTTTTGGGS
T ss_pred --CcccccCcCCHHHHHHHHHHHHHHHHHcC-CCEEEecccccCCccccCCHHHHHHHhhcccCCCeEEEccchHHHHHH
Confidence 24445678999999999999999999986 899999999999999999999999999999999999999999999887
Q ss_pred ccccccCChHHHHHHHHHcCCCcCChh----hHHHHHHHHHhCCCCCHHHHHHHhhhhHHHHHHhCCCCCCCCCCCCCCC
Q 006889 156 NTQHYTRTPEEAAADAIKAGLDLDCGP----FLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNL 231 (627)
Q Consensus 156 ~~~~~~~~~~~a~~~al~AG~D~~~~~----~~~~~l~~av~~G~~~~~~id~av~Ril~~k~~lGlf~~~p~~~~~~~~ 231 (627)
..|+ .+..+++++|++||+||+|.+ .+.+.|.+||++|+|+++|||+||+|||++|+++|+|+ +|+... .
T Consensus 294 ~~~~--~~~~~a~~~al~AG~D~~m~~~~~~~~~~~l~~av~~G~i~~~~id~av~RiL~~k~~~glf~-~p~~~~--~- 367 (602)
T 1x38_A 294 TPAG--SDYSYSVKASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFE-NPYADP--A- 367 (602)
T ss_dssp SSTT--TTHHHHHHHHHHHTCCBEECCSCHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTT-CCSCCG--G-
T ss_pred hhcC--CCHHHHHHHHHHcCCCcccCCcchhhHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhCCCC-CCCCCc--c-
Confidence 5444 467899999999999999853 34678999999999999999999999999999999999 665321 1
Q ss_pred CCCCCCCHHHHHHHHHHHhccceeeccCC--c---CCCccCCCCcEEEEEccCCccccccccccc-------cCCCCcCC
Q 006889 232 GPRDVCTPAHQQLALQAAHQGIVLLKNSA--R---TLPLSTLRHHTVAVIGPNSDVTVTMIGNYA-------GVACGYTT 299 (627)
Q Consensus 232 ~~~~v~~~~~~~la~e~A~eSiVLLKN~~--~---~LPL~~~~~~~vaviG~~a~~~~~~~G~~~-------g~~~~~~t 299 (627)
....+++++|+++++++|+||||||||++ + +|||+++ .+||+|+||+++....++|+|+ +.+....+
T Consensus 368 ~~~~~~~~~~~~la~~~a~~sivLLKN~~~~~~~~~LPL~~~-~~~iaviG~~A~~~~~~~gg~~~~~~g~~~~~~~~~t 446 (602)
T 1x38_A 368 MAEQLGKQEHRDLAREAARKSLVLLKNGKTSTDAPLLPLPKK-APKILVAGSHADNLGYQCGGWTIEWQGDTGRTTVGTT 446 (602)
T ss_dssp GGGGTTCHHHHHHHHHHHHHHCEEEEECSSTTSCCCCSCCSC-CSEEEEESTTTTCHHHHHCSSSSSTTCCSSCCSSCBC
T ss_pred hhhccCCHHHHHHHHHHHHhceEEeccCCCCCcccccccCCC-CCEEEEEcCCCccccccCCcceeeccCCCCCCCCccc
Confidence 11357899999999999999999999997 5 9999864 4799999999987655555543 22455689
Q ss_pred HHHHHHHhh----ceeeeccCCccccCCccchHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhHHHHHHHHHH
Q 006889 300 PLQGISRYA----KTIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK 375 (627)
Q Consensus 300 ~~~~l~~~~----~~~y~~g~~~~~~~~~~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q~~Li~~v~~ 375 (627)
++++|+++. .+.|..++. .++. .|+++|++||++|.++..++|| ||.+|.||+.|.+||++|++
T Consensus 447 ~~~~l~~~~~~~~~v~~~~~~~----------~~~~-~a~~aD~viv~~g~~~~~e~~g-dr~~l~lp~~q~~li~~v~~ 514 (602)
T 1x38_A 447 ILEAVKAAVDPSTVVVFAENPD----------AEFV-KSGGFSYAIVAVGEHPYTETKG-DNLNLTIPEPGLSTVQAVCG 514 (602)
T ss_dssp HHHHHHHHSCTTCEEEEESSCC----------HHHH-HHTTCSCEEEEEECCCCCGGGG-CCSSCCCCSSSHHHHHHHHT
T ss_pred HHHHHHHHhCCCeEEEEcCCCC----------HHHH-HHhhCCEEEEEeccCcccccCC-CcCCcCCChhHHHHHHHHHh
Confidence 999999863 245555431 1223 3889999999999887788888 99999999999999999986
Q ss_pred hcCCCEEEEEecCcceecccccCCCCccEEEEccCCcchhHHHHHHHHhCCCCC-CCCccccCcccccCCCCCccccccc
Q 006889 376 ASRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRANP-GKLPMTWYPQDYVSRLPMTDMRMRA 454 (627)
Q Consensus 376 ~~~kpvVVVl~~g~P~~l~~~~~~~~v~Ail~a~~~G~e~g~AlAdVL~G~~nP-GkLPvT~~p~~~~~~~p~~~~~~~~ 454 (627)
++|+|||+++|+|++|.++. ++++|||++|+||+++ +|+||||||++|| ||||+|| |++. +++|.+
T Consensus 515 --~~~~VvVl~~g~P~~l~~~~--~~~~Ail~a~~pG~~g-~AiadvL~G~~nPsGkLP~t~-p~~~-~~~p~~------ 581 (602)
T 1x38_A 515 --GVRCATVLISGRPVVVQPLL--AASDALVAAWLPGSEG-QGVTDALFGDFGFTGRLPRTW-FKSV-DQLPMN------ 581 (602)
T ss_dssp --TSCEEEEEECSSCCCCHHHH--HHCSEEEEEECCCSBT-HHHHHHHTTSSCCCCCCSSCB-CSCG-GGCSCC------
T ss_pred --CCCEEEEEeCCCceeccchh--hccCeEEeccCCchHH-HHHHHHHcCCCCCCccCcccc-cCcc-ccCCcc------
Confidence 57999999999999996442 5899999999999997 9999999999999 9999997 8876 778842
Q ss_pred cCCCCCCccccCCCCcccccCcCCCCCC
Q 006889 455 ARGYPGRTYRFYKGPVVFPFGHGMSYTT 482 (627)
Q Consensus 455 ~~~~~~~~Yr~~~~~~~ypFG~GLSYTt 482 (627)
.+||||+ |+||||||||||+
T Consensus 582 ------~g~~~~~--plypFG~GLSYt~ 601 (602)
T 1x38_A 582 ------VGDAHYD--PLFRLGYGLTTNA 601 (602)
T ss_dssp ------TTCSSCC--CSBCTTCCBCCCC
T ss_pred ------CCCCCCC--ccCcCCCCcCCCC
Confidence 2488886 9999999999996
No 6
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A*
Probab=100.00 E-value=3e-89 Score=777.04 Aligned_cols=413 Identities=20% Similarity=0.277 Sum_probs=337.0
Q ss_pred ccee-eCccccccCCCCCCc-ccccCCCCHHHHHHHHHHHHHHHhcCCCCCCceEEeecccccccCC---CCCCCCcccc
Q 006889 8 GLTY-WSPNVNIFRDPRWGR-GQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLD---NWNGVDRYHF 82 (627)
Q Consensus 8 G~~~-~aP~~di~r~p~~gr-~~e~fgeDP~l~~~~a~a~v~GlQ~~~~~~~gv~a~~KHF~g~g~~---~~~~~~r~~~ 82 (627)
|+|+ |+|++||.|||+||| ++|||||||+|+++|+.|||+|||+. ||++|+|||||||.. +|.+.+
T Consensus 168 Gi~~~~aPvvDv~r~p~~grig~rsfgeDP~lv~~~a~a~v~Glq~~-----gV~a~~KHFpg~g~~~~dsh~~~~---- 238 (642)
T 3bmx_A 168 GINTDFSPVVDINNNPDNPVIGVRSFSSNRELTSRLGLYTMKGLQRQ-----DIASALKHFPGHGDTDVDSHYGLP---- 238 (642)
T ss_dssp TCCEECCCBCCCCCCTTCSSSGGGSSCSSHHHHHHHHHHHHHHHHHT-----TCEEEEEEETCCTTCSSCTTTSCC----
T ss_pred CCCEEECCccccCCCCCCCcccccccCCCHHHHHHHHHHHHHHHHhC-----CceEEeccccCCCCccCCCCCCCc----
Confidence 9999 999999999999997 79999999999999999999999998 899999999999853 333222
Q ss_pred cccCCHHHHHHhccHHHHHHHHcCCCceEEec---cccCC-------------CcccccCHHHHHHHHhhhcCCCeEEEc
Q 006889 83 NARVSKQDLEDTYNVPFKACVVEGKVASVMCS---YNQVN-------------GKPTCADPDILKNTIHGQWRLDGYIVS 146 (627)
Q Consensus 83 ~~~~~~~~l~e~~l~pF~~ai~~g~~~~vM~s---y~~vn-------------g~pa~~s~~ll~~~LR~e~gf~G~v~S 146 (627)
.+.+++++|+|+||+||+++|++| +.+|||| ||.+| |+|||+|+++|+++||+||||+|+|||
T Consensus 239 ~~~~~~~~l~e~~l~PF~~ai~ag-~~~VM~ah~~y~~id~~~~~~~~~g~~~g~pa~~s~~ll~~lLR~e~GF~G~VvS 317 (642)
T 3bmx_A 239 LVSHGQERLREVELYPFQKAIDAG-ADMVMTAHVQFPAFDDTTYKSKLDGSDILVPATLSKKVMTGLLRQEMGFNGVIVT 317 (642)
T ss_dssp BCCCCHHHHHHTTHHHHHHHHHTT-CCEEEECCCBCTTTCCCEEECTTTSCEEECBGGGCHHHHCCCCCCCSCCCSEEEC
T ss_pred eeccCHHHHhhhhHHHHHHHHHcC-CCEEEEccccccccCccccccccccccCcccccCCHHHHHHHhhCcCCCCEEEEe
Confidence 346699999999999999999977 8999999 66777 789999999999999999999999999
Q ss_pred ChhhhhhhhccccccCChHHHHHHHHHcCCCcCChh-------------hHHHHHHHHHhCCCCCHHHHHHHhhhhHHHH
Q 006889 147 DCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGP-------------FLAIHTEGAVRGGLLREEDVNLALAYTITVQ 213 (627)
Q Consensus 147 D~~~~~~~~~~~~~~~~~~~a~~~al~AG~D~~~~~-------------~~~~~l~~av~~G~~~~~~id~av~Ril~~k 213 (627)
||++|+++... .+..+++++|++||+||+|.+ .+.+.|.+||++|+|+++|||+||+|||++|
T Consensus 318 D~~~m~ai~~~----~~~~~a~~~Al~AG~D~~l~~~~~~~~~~~~~~~~~~~~l~~av~~G~i~~~~id~av~RiL~~k 393 (642)
T 3bmx_A 318 DALNMKAIADH----FGQEEAVVMAVKAGVDIALMPASVTSLKEEQKFARVIQALKEAVKNGDIPEQQINNSVERIISLK 393 (642)
T ss_dssp SCTTSHHHHTT----SCHHHHHHHHHHHTCSBEESCSCCCSGGGTHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred CchhhHHHHhc----CCHHHHHHHHHHcCCCEecccccccccccchhHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHH
Confidence 99999998752 267899999999999998432 3457899999999999999999999999999
Q ss_pred HHhCCCCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHhccceeeccCCcCCCccCCCCcEEEEEccCCccccccccccc
Q 006889 214 MRLGMFDGEPSAQPFG--NLGPRDVCTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYA 291 (627)
Q Consensus 214 ~~lGlf~~~p~~~~~~--~~~~~~v~~~~~~~la~e~A~eSiVLLKN~~~~LPL~~~~~~~vaviG~~a~~~~~~~G~~~ 291 (627)
+++|+|+..|+..... ......+++++|+++++++|+||||||||++++|||++++.+||+|+||++..
T Consensus 394 ~~~gl~~~~p~~~~~~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~LPL~~~~~~~iaviG~~~~~--------- 464 (642)
T 3bmx_A 394 IKRGMYPARNSDSTKEKIAKAKKIVGSKQHLKAEKKLAEKAVTVLKNEQHTLPFKPKKGSRILIVAPYEEQ--------- 464 (642)
T ss_dssp HHTTCSSCCCCCCHHHHHHHHHHHTTCHHHHHHHHHHHHHHCEEEEEGGGCCSCCCCTTCEEEEEESSHHH---------
T ss_pred HHcCCCcCCCCcccccchhhhhhhcCCHHHHHHHHHHHHhCEEEEccCCCcCCCCCCCCCEEEEEeCCccc---------
Confidence 9999999325421000 00012467899999999999999999999999999986456799999987432
Q ss_pred cCCCCcCCHHHHHHHhh---ceeeeccCCccccCCccchHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhH--
Q 006889 292 GVACGYTTPLQGISRYA---KTIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQ-- 366 (627)
Q Consensus 292 g~~~~~~t~~~~l~~~~---~~~y~~g~~~~~~~~~~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q-- 366 (627)
..+++++|+++. ...+..++.. .......+++++++++.+|++||+++.......| .+.+|+.|
T Consensus 465 -----~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~a~~aDvvIv~~~~~~~~~~e-----~~~l~~~q~~ 533 (642)
T 3bmx_A 465 -----TASIEQTIHDLIKRKKIKPVSLSKM-NFASQVFKTEHEKQVKEADYIITGSYVVKNDPVV-----NDGVIDDTIS 533 (642)
T ss_dssp -----HHHHHHHHHHHHHTTSSCCCEEEEE-ECTTCCCCHHHHHHHHHCSEEEEEECCSSCCCCE-----ETTEECCCCC
T ss_pred -----hhhHHHHHHHhhCCCCeeEEeccCC-CCcchhhHHHHHHHHhhCCEEEEEecCCCCCchh-----ccCCcccccc
Confidence 346789998875 3333333211 1111245778899999999999965532111122 33456666
Q ss_pred ----------HHHHHHHHHhcCCCEEEEEecCcceecccccCCCCccEEEEccCC--------cchhHHHHHHHHhCCCC
Q 006889 367 ----------QELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYP--------GQAGGAAIADVLFGRAN 428 (627)
Q Consensus 367 ----------~~Li~~v~~~~~kpvVVVl~~g~P~~l~~~~~~~~v~Ail~a~~~--------G~e~g~AlAdVL~G~~n 428 (627)
.+||+++++ .+||+|||. .|+|++|+|+. +++|||++|++ |+++|+|+||||||++|
T Consensus 534 ~~~~~~~~~~~~li~~~~~-~~~pvVvv~-~g~P~~l~~~~---~~~Ail~a~~~~G~~~g~~g~~~g~AiadvLfG~~n 608 (642)
T 3bmx_A 534 DSSKWATVFPRAVMKAALQ-HNKPFVLMS-LRNPYDAANFE---EAKALIAVYGFKGYANGRYLQPNIPAGVMAIFGQAK 608 (642)
T ss_dssp SSTTHHHHHHHHHHHHHHH-TTCCEEEEE-CSCGGGGGGCT---TCSEEEECSCCCCEETTEESCSHHHHHHHHHTTSSC
T ss_pred ccccccchhHHHHHHHHHH-cCCCEEEEe-cCChhcccccc---ccCeEEEEccCcccccccccchHHHHHHHHHcCCCC
Confidence 899999976 578988775 59999999973 69999999999 79999999999999999
Q ss_pred C-CCCccccCcccccCCCCCccccccccCCCCCCccccCCCCcccccCcCCCCCCce
Q 006889 429 P-GKLPMTWYPQDYVSRLPMTDMRMRAARGYPGRTYRFYKGPVVFPFGHGMSYTTFA 484 (627)
Q Consensus 429 P-GkLPvT~~p~~~~~~~p~~~~~~~~~~~~~~~~Yr~~~~~~~ypFG~GLSYTtF~ 484 (627)
| ||||+|| |++. .| .+|+||||||||||+|.
T Consensus 609 PsGkLPvt~-p~~~---~~---------------------~~plfpfG~GLsYt~~~ 640 (642)
T 3bmx_A 609 PKGTLPVDI-PSVT---KP---------------------GNTLYPLGYGLNIKTGR 640 (642)
T ss_dssp CCCCCSSCE-ECSS---ST---------------------TSEEECTTCCBCTTTCS
T ss_pred CCccCceee-eccC---CC---------------------CCcccCCCCCccCCCCC
Confidence 9 9999997 6542 11 25999999999999984
No 7
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A*
Probab=100.00 E-value=9.3e-64 Score=549.12 Aligned_cols=363 Identities=17% Similarity=0.173 Sum_probs=271.3
Q ss_pred ccee-eCccccccCCCCCC-cccccCCCCHHHHHHHHHHHHHHHhcCCCCCCceEEeecccccccCCCCCCCCccccccc
Q 006889 8 GLTY-WSPNVNIFRDPRWG-RGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNAR 85 (627)
Q Consensus 8 G~~~-~aP~~di~r~p~~g-r~~e~fgeDP~l~~~~a~a~v~GlQ~~~~~~~gv~a~~KHF~g~g~~~~~~~~r~~~~~~ 85 (627)
|+|+ |+|++||.|||+|| |++|||||||+++++|+.|||+|+|+. ||+||+|||||||.+..+ .+.....++
T Consensus 142 Gin~~fAPvvDv~r~P~~g~ig~rsfGEDP~lv~~~a~A~v~GlQ~~-----gV~a~~KHFpG~G~~~~D-sh~~~~~v~ 215 (535)
T 3sql_A 142 GINWVLAPVLDVNNNPHNPVINIRAFGETPDQVSALGTAFIRGAQQY-----AVLTTAKHFPGHGDTATD-SHLALPTIS 215 (535)
T ss_dssp TCCEECCCBCCCCCCTTCSSSGGGSSCSSHHHHHHHHHHHHHHHTTS-----SCBCEEEEETCCCSCSCC-TTTSCCBCC
T ss_pred CCCEEecCeeccCCCCCCCCccccCCCCCHHHHHHHHHHHHHHHhhc-----ccceeeeeecccCCcccC-CccCCCcCC
Confidence 9999 99999999999999 789999999999999999999999998 899999999999864311 111112345
Q ss_pred CCHHHHHHhccHHHHHHHHcCCCceEEeccccCC----CcccccCHHHHHHHHhhhcCCCeEEEcChhhhhhhhcccccc
Q 006889 86 VSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVN----GKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYT 161 (627)
Q Consensus 86 ~~~~~l~e~~l~pF~~ai~~g~~~~vM~sy~~vn----g~pa~~s~~ll~~~LR~e~gf~G~v~SD~~~~~~~~~~~~~~ 161 (627)
.++++|+|+||+||+++|++| +.+||||||.+| +.|||.|+++|+++||+||||+|+|||||++|+++...
T Consensus 216 ~s~~~L~e~~L~PF~~aI~ag-~~sVM~ah~~v~~lD~~~PAs~S~~lLtdlLR~e~GF~G~VvSD~l~m~ai~~~---- 290 (535)
T 3sql_A 216 HDDTRLNTVELPPFKAAIQGG-VDAVMNAHLMIPAWDQQYPATLSPAILTGQLRHKLGFKGLIVTDALVMGGITQF---- 290 (535)
T ss_dssp CCHHHHHHTTSHHHHHHHHTT-CSEEEECCCBBTTTBSSSCGGGCHHHHCCCCCCCSCCCSEEECSCTTSHHHHTT----
T ss_pred CCHHHHHHHHHHHHHHHHHcC-CCEEEecCccCCCcCCCcCcccCHHHHHHHHHHhcCCCceEEcChhHHHHHHhc----
Confidence 699999999999999999976 899999999887 48999999999999999999999999999999998652
Q ss_pred CChHHHHHHHHHcCCCcCChh----hHHHHHHHHHhCCCCCHHHHHHHhhhhHHHHHHhCCCCCCCCCCCCCCCCCCCCC
Q 006889 162 RTPEEAAADAIKAGLDLDCGP----FLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLGPRDVC 237 (627)
Q Consensus 162 ~~~~~a~~~al~AG~D~~~~~----~~~~~l~~av~~G~~~~~~id~av~Ril~~k~~lGlf~~~p~~~~~~~~~~~~v~ 237 (627)
.+..+++++|++||+||+|.+ ...+.|.+||++|+++++|||+||+|||++|+++|+|+ ++... . ...++
T Consensus 291 ~~~~eaa~~Al~AG~Dm~l~~~~~~~~~~~l~~AV~~G~i~e~rId~av~RIL~~K~~lGl~~-~~~~~----~-~~~~~ 364 (535)
T 3sql_A 291 AAPDTVVVQAIAAGADILLMPPDVDGAIIAIETAIKTGQLSESRIYESVERIWQAKQKILTAT-PSTFP----Q-GISGD 364 (535)
T ss_dssp SCHHHHHHHHHHHTCSBEESCSCHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTSC-CCCTT----T-TCCTT
T ss_pred CCHHHHHHHHHHCCCCeecCCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcCCC-CCccc----h-hhccC
Confidence 267899999999999997632 45678999999999999999999999999999999998 33321 1 23678
Q ss_pred CHHHHHHHHHHHhccceeeccCCcCCCcc----CCCCcEEEEEccCCccccccccccccCCCCcCCHHHHHHHh-hceee
Q 006889 238 TPAHQQLALQAAHQGIVLLKNSARTLPLS----TLRHHTVAVIGPNSDVTVTMIGNYAGVACGYTTPLQGISRY-AKTIH 312 (627)
Q Consensus 238 ~~~~~~la~e~A~eSiVLLKN~~~~LPL~----~~~~~~vaviG~~a~~~~~~~G~~~g~~~~~~t~~~~l~~~-~~~~y 312 (627)
+++|+++|+|+|+||||| +++|||+ +++.++|+|||++++.+. +.|.++..++| ++. ..+.+
T Consensus 365 ~~eh~~lA~e~A~eSiVL----~~~LPL~~~~~~~~~~~laVIG~~a~~~~-----~~g~~~~~~~P----~~~G~~~~~ 431 (535)
T 3sql_A 365 RPETRKTVAMVLERATKH----QKSLVKISSFPDNFARNLIVVDSVLKSPF-----LRPNCPAIAIP----QRHGYAAEI 431 (535)
T ss_dssp CHHHHHHHHHHHHHHCEE----CSSCCCCCCCSTTSEEEEEEESCGGGCTT-----CCTTCHHHHHH----HTTTEEEEE
T ss_pred CHHHHHHHHHHHHhCeEE----CCcCCCCcccccCCCCEEEEECCCCCCcc-----cCCCCCcccCH----HHcCceEEE
Confidence 999999999999999999 3599998 345689999999998764 33333333334 222 22333
Q ss_pred eccCCccccCCccchHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhHHHHHHHHHHhcCCCEEEEEecCccee
Q 006889 313 QAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMCGGPVD 392 (627)
Q Consensus 313 ~~g~~~~~~~~~~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q~~Li~~v~~~~~kpvVVVl~~g~P~~ 392 (627)
...+. +..... ....-.+=+|+-.++-..+. . +. .+.++++.+.. .-.-+|+. |+||.
T Consensus 432 ~~~~~---------~~~~~~-~~~~~~~q~f~r~~~f~~~~-------~-~~--~~~~~~l~~~~-~~~~~~~y-g~py~ 489 (535)
T 3sql_A 432 VELKT---------LPRLQL-EAIPTLIQCFLRGNPFTEKL-------A-DP--IDVLQKIAAQI-PLQGVIFY-GSPYF 489 (535)
T ss_dssp EETTT---------GGGBCC-CSSCEEEEEEECCCSSCSSC-------C-CC--HHHHHHHHHHS-CEEEEEEE-ECCTT
T ss_pred EcCcc---------cccccc-CCCCeEEEEeecCCCCCCCc-------c-hH--HHHHHHHHhcC-ceeEEEEe-CChhH
Confidence 22221 110000 11122333566433322211 1 22 56777877643 22344444 79999
Q ss_pred ccccc-CCCCccEEEEccCCcc--hhHHHHHHHHhC
Q 006889 393 VSFAK-NDPRIGAILWVGYPGQ--AGGAAIADVLFG 425 (627)
Q Consensus 393 l~~~~-~~~~v~Ail~a~~~G~--e~g~AlAdVL~G 425 (627)
+.|+. .++ .|-++|.+|| +++.-+-..|++
T Consensus 490 ~~~~~~~~~---~~p~~~~~gq~~~~q~~~~~~~~~ 522 (535)
T 3sql_A 490 LEALQTTLP---EIPWWFSYGQMAIAQAEICTSLWE 522 (535)
T ss_dssp HHHHHHHCT---TSCEEEESCCSHHHHHHHHHHTCS
T ss_pred HHHHHHHhh---cCCcccCCccCHHHHHHHHHHHhc
Confidence 98874 333 4456778888 455555566666
No 8
>3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans}
Probab=100.00 E-value=1e-51 Score=434.54 Aligned_cols=204 Identities=20% Similarity=0.299 Sum_probs=175.1
Q ss_pred ccee-eCccccccCCCCCCccc-ccCCCCHHHHHHHHHHHHHHHhcCCCCCCceEEeecccccccCCCCCCCCccccccc
Q 006889 8 GLTY-WSPNVNIFRDPRWGRGQ-ETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNAR 85 (627)
Q Consensus 8 G~~~-~aP~~di~r~p~~gr~~-e~fgeDP~l~~~~a~a~v~GlQ~~~~~~~gv~a~~KHF~g~g~~~~~~~~r~~~~~~ 85 (627)
|+|+ |+|++||.|||+|||++ |||||||+++++|+.|+|+|+|+. ||++|+|||||||.+.. +..+....++
T Consensus 125 Gi~~~~aPv~Dv~r~p~~~rig~RsfgeDP~lv~~~a~a~v~Glq~~-----gV~a~~KHFpG~g~~~~-dsh~~~~~~~ 198 (351)
T 3tev_A 125 GINWNFTPVLDINVNPANPVIGDRAYGSDAARVTRHGRAALAGHTRE-----GVAPCAKHFPGHGDTHQ-DSHLALPRVS 198 (351)
T ss_dssp TCCEECCCBCCCCCCTTCCSSGGGSSCSSHHHHHHHHHHHHHHHHTT-----TCEECEEEETCCTTCBC-SSTTSCCEEC
T ss_pred CCCEeccceeEeccCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHc-----CCeEEeeeccCCCCCcC-CCCcCCCcCC
Confidence 9999 99999999999999875 699999999999999999999998 89999999999986431 1112222457
Q ss_pred CCHHHHHHhccHHHHHHHHcCCCceEEec---cccCCC-cccccCHHHHHHHHhhhcCCCeEEEcChhhhhhhhcccccc
Q 006889 86 VSKQDLEDTYNVPFKACVVEGKVASVMCS---YNQVNG-KPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYT 161 (627)
Q Consensus 86 ~~~~~l~e~~l~pF~~ai~~g~~~~vM~s---y~~vng-~pa~~s~~ll~~~LR~e~gf~G~v~SD~~~~~~~~~~~~~~ 161 (627)
+++++|+|+||+||+++ ++| +.+|||| ||.+|| .|||+|+++|+++||+||||+|+|||||++|+++...+
T Consensus 199 ~s~~~L~e~~l~PF~~a-~ag-~~~VM~aHi~y~~id~~~Pa~~s~~ll~~lLR~elGF~G~VvSD~~~m~~i~~~~--- 273 (351)
T 3tev_A 199 KSRAELDAGELAPFRAL-LPE-TPAIMTAHIVYDALDAEHPATLSPRILTGLLREEWGYDGVIVTDSMGMQAIDANY--- 273 (351)
T ss_dssp CCHHHHHHTTTHHHHHH-GGG-CSEEEECSCEETTTBSSSCGGGCHHHHCCCCCCCSCCCSEEEECCTTSHHHHHHS---
T ss_pred CCHHHHHHhhhHHHHHH-hcC-CCEEEecceEecCCCCCcCccCCHHHHHHHHHhhcCCCeEEEeccchHHHHHhcC---
Confidence 79999999999999999 655 8999999 888998 69999999999999999999999999999999987532
Q ss_pred CChHHHHHHHHHcCCCcCChh-------hHHHHHHHHHhCCCCCHHHHHHHhhhhHHHHHHhCCCCCCCCCCC
Q 006889 162 RTPEEAAADAIKAGLDLDCGP-------FLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQP 227 (627)
Q Consensus 162 ~~~~~a~~~al~AG~D~~~~~-------~~~~~l~~av~~G~~~~~~id~av~Ril~~k~~lGlf~~~p~~~~ 227 (627)
+..+++++|++||+||+|.+ ...+.|.++|++ ++++||+||+|||++|+++|+|+ +|+.++
T Consensus 274 -~~~~~~~~Al~AG~D~~l~~~~~~~~~~~~~~l~~av~~---~~~~id~av~RIL~~k~~~g~f~-~Py~~~ 341 (351)
T 3tev_A 274 -GRGEAAVRALRAGADLVMALGRREVQQATLAAVAEYVPE---NQAAVATKRERLRALARRFPAQA-DETLDP 341 (351)
T ss_dssp -CHHHHHHHHHHHTCSBEECCSSHHHHHHHHHHHHHHGGG---CHHHHHHHHHHHHHHHHHSCCCC-------
T ss_pred -CHHHHHHHHHHcCCCEECCCCChhHHHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHhCCCC-CCCCCh
Confidence 46789999999999999842 135678899998 99999999999999999999999 777543
No 9
>2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A
Probab=100.00 E-value=5.1e-45 Score=382.09 Aligned_cols=193 Identities=17% Similarity=0.184 Sum_probs=165.8
Q ss_pred ccee-eCccccccCCCCCCcccccCCCCHHHHHHHHHHHHHHHhcCCCCCCceEEeecccccccCCCCCCCCcccccccC
Q 006889 8 GLTY-WSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNARV 86 (627)
Q Consensus 8 G~~~-~aP~~di~r~p~~gr~~e~fgeDP~l~~~~a~a~v~GlQ~~~~~~~gv~a~~KHF~g~g~~~~~~~~r~~~~~~~ 86 (627)
|+|+ |+|++||.|+ +|.|+.|+|||||+++++|+.|+|+|||+. ||++|+|||||||.++.+ .+.+..+
T Consensus 109 Gi~~~~aPv~Dv~~~-~~~ig~rsfgeDP~lv~~~a~a~v~Glq~~-----gV~a~~KHFpG~G~~~~d----sh~~~~v 178 (340)
T 2oxn_A 109 DVDLSFAPVLDMGFA-CKAIGNRAFGEDVQTVLKHSSAFLRGMKAV-----GMATTGKHFPGHGAVIAD----SHLETPY 178 (340)
T ss_dssp TCCEECCCBCCCCSC-STTTGGGSSCSSHHHHHHHHHHHHHHHHHT-----TCCCEEEEETCCTTCCSC----CSSSSCB
T ss_pred CCCEEecCccCCCCC-CCcCcCCCCCCCHHHHHHHHHHHHHHHHHC-----CceeeeccCcCCCCccCC----CCCCCcc
Confidence 9999 9999999999 888999999999999999999999999998 899999999999976421 1222223
Q ss_pred CH-HHHHHhccHHHHHHHHcCCCceEEec---cccCCCcccccCHHHHHHHHhhhcCCCeEEEcChhhhhhhhccccccC
Q 006889 87 SK-QDLEDTYNVPFKACVVEGKVASVMCS---YNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTR 162 (627)
Q Consensus 87 ~~-~~l~e~~l~pF~~ai~~g~~~~vM~s---y~~vng~pa~~s~~ll~~~LR~e~gf~G~v~SD~~~~~~~~~~~~~~~ 162 (627)
++ ++| |+||+||+++|++|++.+|||| ||.+|++|+|+|+++|+++||+||||+|+|||||++|.++.. ..
T Consensus 179 ~~~~~l-~~~l~PF~~ai~~g~~~~VM~aHv~y~~id~~Pa~~s~~ll~~lLR~elGF~G~VvSD~l~m~~~~~----~~ 253 (340)
T 2oxn_A 179 DERETI-AQDMAIFRAQIEAGVLDAMMPAHVVYPHYDAQPASGSSYWLKQVLREELGFKGIVFSDDLSMEGAAV----MG 253 (340)
T ss_dssp CCCSCC-HHHHHHHHHHHHHTCCSEEEECSCBBTTTBSSCGGGCHHHHTCCCCCCTCCCSEEEEEEGGGSCHHH----HC
T ss_pred CCHHHH-HHHHHHHHHHHHcCCCCeeeeccccccccCCcCcccCHHHHHHHhhcccCCCeEEEcccchhhhhhc----cC
Confidence 33 889 9999999999999888999999 999999999999999999999999999999999999987642 35
Q ss_pred ChHHHHHHHHHcCCCcCChh---hHHHHHHHHHhCCCCCHHHHHHHhhhhHHHHHHhC
Q 006889 163 TPEEAAADAIKAGLDLDCGP---FLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLG 217 (627)
Q Consensus 163 ~~~~a~~~al~AG~D~~~~~---~~~~~l~~av~~G~~~~~~id~av~Ril~~k~~lG 217 (627)
+..+++++|++|||||+|.+ .....+.++|++ ++++|+++++.|+....++++
T Consensus 254 ~~~ea~~~Al~AG~Dm~l~~~~~~~~~~~~~av~~--~~~~Rl~~~~~~~~~~~~~l~ 309 (340)
T 2oxn_A 254 GPVERSHQALVAGCDMILICNKREAAVEVLDNLPI--MEVPQAEALLKKQQFSYSELK 309 (340)
T ss_dssp SHHHHHHHHHHHTCSEEECCSCHHHHHHHHHHSCC--CCCGGGGGGSCSCCCCHHHHH
T ss_pred CHHHHHHHHHHcCCCEEcCCCCHHHHHHHHHHHHH--hhHHHHHHHhhcccccHHHHh
Confidence 77899999999999999853 345677888843 899999999998865444443
No 10
>4gvf_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: NDG NAG MES; 1.35A {Salmonella enterica subsp} PDB: 4gvg_A* 4gvh_A* 4gvi_A*
Probab=100.00 E-value=1.7e-44 Score=378.51 Aligned_cols=196 Identities=17% Similarity=0.214 Sum_probs=165.0
Q ss_pred ccee-eCccccccC-CCCCCcccccCCCCHHHHHHHHHHHHHHHhcCCCCCCceEEeecccccccCCCCCCCCccccccc
Q 006889 8 GLTY-WSPNVNIFR-DPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNAR 85 (627)
Q Consensus 8 G~~~-~aP~~di~r-~p~~gr~~e~fgeDP~l~~~~a~a~v~GlQ~~~~~~~gv~a~~KHF~g~g~~~~~~~~r~~~~~~ 85 (627)
|+|+ |+|++||.| +|.| ++|||||||+++++|+.|+|+|||+. ||++|+|||||||.++.+. .......+
T Consensus 112 Gin~~faPv~Dv~r~~~~i--g~rsfgeDP~lv~~~a~a~v~Glq~~-----GV~a~~KHFpG~G~~~~ds-h~~~~v~~ 183 (349)
T 4gvf_A 112 DIDISFAPVLDVGHISAAI--GERSYHADPAKALAMATRFIDGMHDA-----GMKTTGKHFPGHGAVTADS-HKETPCDP 183 (349)
T ss_dssp TCCEECCCBCCCCSCCTTT--GGGSSCSSHHHHHHHHHHHHHHHHHH-----TCCCEEEEETCCTTCCCCS-SSSCCBCC
T ss_pred CCCEEecCcccCCCCCCCC--cCcCCCCCHHHHHHHHHHHHHHHHHc-----CceeeecccccCCCcccCC-CCCCCCCC
Confidence 9999 999999998 4655 48999999999999999999999998 8999999999999764221 11111124
Q ss_pred CCHHHHHHhccHHHHHHHHcCCCceEEec---cccCCCcccccCHHHHHHHHhhhcCCCeEEEcChhhhhhhhccccccC
Q 006889 86 VSKQDLEDTYNVPFKACVVEGKVASVMCS---YNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTR 162 (627)
Q Consensus 86 ~~~~~l~e~~l~pF~~ai~~g~~~~vM~s---y~~vng~pa~~s~~ll~~~LR~e~gf~G~v~SD~~~~~~~~~~~~~~~ 162 (627)
.+.++|+|.||+||+++|++|.+.+|||| ||++|+.|+|+|+++|+++||+||||+|+|||||++|.++. ...
T Consensus 184 ~s~~el~~~~l~PF~~aI~~g~~~~VM~aHv~y~~id~~Pa~~S~~ll~~lLR~elGF~G~VvSD~l~m~~~~----~~~ 259 (349)
T 4gvf_A 184 RPETDIRGKDMSVFRTLISENKLDAIMPAHVIYRAIDPRPASGSPYWLKTVLRQELGFDGVIFSDDLSMEGAA----IMG 259 (349)
T ss_dssp CCHHHHHHTHHHHHHHHHHTTCCSEEEECSCBCTTTCSSCGGGCHHHHCCCCCCCTCCCSEEEEEEGGGCCCG----GGC
T ss_pred cCHHHHHHHHhHHHHHHHHcCCCCeEeecccccCCCCCCCCcCCHHHHHHHHHHhcCCCEEEEecCCcccccc----ccC
Confidence 57789999999999999999888999999 99999999999999999999999999999999999998653 345
Q ss_pred ChHHHHHHHHHcCCCcCChh---hHHHHHHHHHhCCCCCHHHHHHHhhhhHHHHHHhC
Q 006889 163 TPEEAAADAIKAGLDLDCGP---FLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLG 217 (627)
Q Consensus 163 ~~~~a~~~al~AG~D~~~~~---~~~~~l~~av~~G~~~~~~id~av~Ril~~k~~lG 217 (627)
+..+++++|++|||||+|.+ .....+++++++ ++++|+++++.|++.-.+.++
T Consensus 260 ~~~eaa~~Al~AG~Dm~l~~~~~~~~~~~l~al~~--~~~~r~~~~~~r~~~~~~~l~ 315 (349)
T 4gvf_A 260 SYAERAQASLDAGCDMILVCNNRKGAVSVLDNLSP--IKAERVTRLYHKGSFSRRELM 315 (349)
T ss_dssp CHHHHHHHHHHHTCSEEEECSCHHHHHHHHHHSCC--CCCGGGGGGCCCCCCCHHHHH
T ss_pred CHHHHHHHHHHcCCCEEcCCCCHHHHHHHHHHhhh--ccHHHHHHHhhcCCCCHHHHh
Confidence 78899999999999999854 344567778875 788899999988765555544
No 11
>4g6c_A Beta-hexosaminidase 1; ssgcid, niaid, structural genomics, Na institute of allergy and infectious diseases; 1.38A {Burkholderia cenocepacia} PDB: 4gnv_A*
Probab=100.00 E-value=1.1e-43 Score=372.67 Aligned_cols=192 Identities=19% Similarity=0.173 Sum_probs=157.5
Q ss_pred ccee-eCccccccCCCCCCcccccCCCCHHHHHHHHHHHHHHHhcCCCCCCceEEeecccccccCCCCCCCCcccccccC
Q 006889 8 GLTY-WSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNARV 86 (627)
Q Consensus 8 G~~~-~aP~~di~r~p~~gr~~e~fgeDP~l~~~~a~a~v~GlQ~~~~~~~gv~a~~KHF~g~g~~~~~~~~r~~~~~~~ 86 (627)
|+|+ |+|++||..++.+-++.|+|||||+++++|+.|+|+|||+. ||++|+|||||||.++.+.+ ......+.
T Consensus 124 Gi~~~~aPv~Dv~~gr~~~iG~rsfgeDP~lv~~~a~A~v~Glq~~-----GV~a~~KHFpG~G~~~~dsh-~~~~v~~~ 197 (348)
T 4g6c_A 124 GIDMSFTPVLDLDYGHSKVIGDRAFHRDPRVVTLLAKSLNHGLSLA-----GMANCGKHFPGHGFAEADSH-VALPTDDR 197 (348)
T ss_dssp TCCEECCCBCCCCCSCCTTTGGGSCCSSHHHHHHHHHHHHHHHHHT-----TCCCCEEEETCSSSCCC-----CCCEECC
T ss_pred CCCEeecCccCCCCCCCCCccCcCCCCCHHHHHHHHHHHHHHHHhc-----CCceeeCCCCCCCCccCCCC-CCCCcCCC
Confidence 9999 99999998444444567999999999999999999999998 89999999999997542111 10011133
Q ss_pred CHHHHHHhccHHHHHHHHcCCCceEEec---cccCCCcccccCHHHHHHHHhhhcCCCeEEEcChhhhhhhhccccccCC
Q 006889 87 SKQDLEDTYNVPFKACVVEGKVASVMCS---YNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRT 163 (627)
Q Consensus 87 ~~~~l~e~~l~pF~~ai~~g~~~~vM~s---y~~vng~pa~~s~~ll~~~LR~e~gf~G~v~SD~~~~~~~~~~~~~~~~ 163 (627)
+.++|++.||+||+++ ++| +.+|||| ||.+|++|+|+|+++|+++||+||||+|+|||||++|.++. ...+
T Consensus 198 ~~~el~~~~l~PF~~a-~ag-~~~VM~aHv~y~~id~~Pa~~S~~ll~~lLR~elGF~G~VvSD~l~m~~~~----~~~~ 271 (348)
T 4g6c_A 198 TLDAILEQDVAPYDWL-GLS-LAAVIPAHVIYTQVDKRPAGFSRVWLQDILRGKLGFTGAIFSDDLSMEAAR----EGGT 271 (348)
T ss_dssp CHHHHHHTTSHHHHHH-GGG-CCEEEECSCEETTTCSSCGGGCHHHHCCCCCCCSCCCSEEEEEETTCGGGG----TTCC
T ss_pred CHHHHHHHHHHHHHHH-hcC-CCeEEecceeecCCCCccccCCHHHHHHHHhhccCCCeEEEccCCchhhhh----hcCC
Confidence 6677888899999999 766 8999999 99999999999999999999999999999999999998764 2467
Q ss_pred hHHHHHHHHHcCCCcCChh---hHHHHHHHHHhCCCCCHHHHHHHhhhhHHHHHHh
Q 006889 164 PEEAAADAIKAGLDLDCGP---FLAIHTEGAVRGGLLREEDVNLALAYTITVQMRL 216 (627)
Q Consensus 164 ~~~a~~~al~AG~D~~~~~---~~~~~l~~av~~G~~~~~~id~av~Ril~~k~~l 216 (627)
..+++++|++|||||+|.+ .....++++|+. +.++++++||++++.|.
T Consensus 272 ~~e~a~~Al~AG~Dm~l~~~~~~~~~~~~~al~~-----~~~~~~~~Ri~~l~~r~ 322 (348)
T 4g6c_A 272 LTQAADAALAAGCDMVLVCNQPDAAEVVLNGLKA-----RASAESVRRIKRMRARG 322 (348)
T ss_dssp HHHHHHHHHHHTCSEEECCSCHHHHHHHHHHCCC-------CHHHHHHHHTTSCCS
T ss_pred HHHHHHHHHHcCCCEECCCCChHHHHHHHHHhhc-----ccchHHHHHHHHHHhcc
Confidence 8899999999999999853 345667777764 45788999999997653
No 12
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=96.78 E-value=0.0034 Score=55.94 Aligned_cols=50 Identities=14% Similarity=0.157 Sum_probs=40.6
Q ss_pred eEEEEEEEEeCCCCC-cceEEEEEEeCCCCCCCcchhhccccccccCCCCeEEEEEEecC
Q 006889 527 SLGLHVDIKNTGDMA-GTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHV 585 (627)
Q Consensus 527 ~~~v~v~VtNtG~~~-G~evvQlY~~~p~~~~~P~k~L~gF~kv~l~pGes~~V~~~l~~ 585 (627)
.++++|+|+|.|..+ +.--|.||+.. ++.+=+-+.|+||++++|+|.+.+
T Consensus 34 ~~ti~vtV~N~G~~~a~~~~V~lyvng---------~~v~t~~v~La~G~s~tv~f~~~~ 84 (127)
T 3idu_A 34 LAEYEVHVKNLGGIGVPSTKVRVYING---------TLYKNWTVSLGPKEEKVLTFNWTP 84 (127)
T ss_dssp CEEEEEEEEECSSSCEEEEEEEEEETT---------EEEEEEEEEECTTCEEEEEEEECC
T ss_pred EEEEEEEEEECCCCccCCcEEEEEECC---------EEEeeEEeccCCCCeEEEEEEEEc
Confidence 689999999999975 77789999943 233334557999999999999987
No 13
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=96.35 E-value=0.012 Score=51.24 Aligned_cols=61 Identities=10% Similarity=0.176 Sum_probs=48.6
Q ss_pred eEEEEEEEEeCCCC-CcceEEEEEEeCCCCCCCcchhhcccccc-ccCCCCeEEEEEEecCCCCceEEeCCCCEEecCeE
Q 006889 527 SLGLHVDIKNTGDM-AGTHTLLVFAKPPAGNWSPNKQLIGFKKV-HVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGE 604 (627)
Q Consensus 527 ~~~v~v~VtNtG~~-~G~evvQlY~~~p~~~~~P~k~L~gF~kv-~l~pGes~~V~~~l~~~~~ls~~d~~~~~~~~~G~ 604 (627)
.++++++|+|.|.. ++.-.|-||+.. .+.+.+.| .|++|+|++|+|++.+ . -++|.
T Consensus 20 ~~ti~atVkN~G~~~a~~~~V~ly~~g---------~~v~t~~v~~LaaG~s~tv~~~w~~-~------------~~~G~ 77 (114)
T 2l0d_A 20 VNTMTATIENQGNKDSTSFNVSLLVDG---------IVVDTQTVTSLESENSTNVDFHWTL-D------------GTANS 77 (114)
T ss_dssp EEEEEEEEEECSSSCBCCEEEEEEETT---------EEEEEEEESCBCBTCEEEEEEEEEC-C------------CSCSE
T ss_pred eEEEEEEEEECCCCCCCCEEEEEEECC---------EEEcceecccccCCCEEEEEEEEee-c------------CcCce
Confidence 68999999999986 677889999853 45666677 5999999999998876 2 03688
Q ss_pred EEEEE
Q 006889 605 HSLHI 609 (627)
Q Consensus 605 y~i~v 609 (627)
|+|.+
T Consensus 78 ytl~a 82 (114)
T 2l0d_A 78 YTLTV 82 (114)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88766
No 14
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=96.13 E-value=0.0037 Score=55.10 Aligned_cols=55 Identities=16% Similarity=0.259 Sum_probs=41.1
Q ss_pred eEEEEEEEEeCCCC-CcceEEEEEEeCCCCCCCcchhhcccccc-ccCCCCeEEEEEEecC
Q 006889 527 SLGLHVDIKNTGDM-AGTHTLLVFAKPPAGNWSPNKQLIGFKKV-HVTAGALQSVRLDIHV 585 (627)
Q Consensus 527 ~~~v~v~VtNtG~~-~G~evvQlY~~~p~~~~~P~k~L~gF~kv-~l~pGes~~V~~~l~~ 585 (627)
.++++++|+|.|.. ++.--|.+|+..|.....++ |-..| .|+||+|.+++|++..
T Consensus 17 ~vTvsatVkN~Gt~~s~a~~V~~yl~~p~~gg~~v----gt~tv~~LaaG~s~t~~v~~~~ 73 (122)
T 2kut_A 17 EITVSARVTNRGAAEAHNVPVAVYLGNPAQGGVEI----GRDTISRIPVGGTGLARVQWKA 73 (122)
T ss_dssp EEEEEEEEECCSSSCBCCCCEEECSSCTTTCCCCC----BCCCCSCBCTTCEEECCEEEEC
T ss_pred eEEEEEEEEeCCCcccCcEEEEEEeCCCccCCeEE----eeEEccccCCCCeEEEEEEEec
Confidence 79999999999987 66778999999976443333 33335 5999999995555443
No 15
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=93.18 E-value=0.37 Score=42.13 Aligned_cols=67 Identities=12% Similarity=0.148 Sum_probs=47.2
Q ss_pred eEEEEEEEEeCCCCC-------cceEEEEEEeCCCCC-------CCcchhhccccccccCCCCeEEEEEEecCCCCceEE
Q 006889 527 SLGLHVDIKNTGDMA-------GTHTLLVFAKPPAGN-------WSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVV 592 (627)
Q Consensus 527 ~~~v~v~VtNtG~~~-------G~evvQlY~~~p~~~-------~~P~k~L~gF~kv~l~pGes~~V~~~l~~~~~ls~~ 592 (627)
.+.+.++|+|.|+.+ |. -..+.|.+..+. ++---| .+..+.|+|||+.+.+++++.
T Consensus 19 ~v~~~ltv~N~s~~~v~l~f~Sgq-~~Df~v~d~~G~~VwrwS~~~~FtQ--a~~~~tl~pGE~~~f~~~w~~------- 88 (120)
T 3isy_A 19 QIKFNMSLKNQSERAIEFQFSTGQ-KFELVVYDSEHKERYRYSKEKMFTQ--AFQNLTLESGETYDFSDVWKE------- 88 (120)
T ss_dssp CEEEEEEEEECSSSCEEEEESSSC-CEEEEEECTTCCEEEETTTTCCCCC--CCEEEEECTTCEEEEEEEESS-------
T ss_pred eEEEEEEEEcCCCCcEEEEeCCCC-EEEEEEECCCCCEEEEccccchhhh--hhceEEECCCCEEEEEEEeCC-------
Confidence 699999999999953 22 124455554331 333333 566778999999999999983
Q ss_pred eCCCCEEecCeEEEEEE
Q 006889 593 DKFGIRRIPMGEHSLHI 609 (627)
Q Consensus 593 d~~~~~~~~~G~y~i~v 609 (627)
.++||.|++.+
T Consensus 89 ------~~~pG~Ytl~a 99 (120)
T 3isy_A 89 ------VPEPGTYEVKV 99 (120)
T ss_dssp ------CCCSEEEEEEE
T ss_pred ------CCCCccEEEEE
Confidence 37899999864
No 16
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=90.96 E-value=0.25 Score=41.12 Aligned_cols=51 Identities=22% Similarity=0.186 Sum_probs=30.4
Q ss_pred EEEEEEEEeCCCCCcceEEEEEEeCCC--C--C-CCcchhhccc-------cccccCCCCeEEEEEE
Q 006889 528 LGLHVDIKNTGDMAGTHTLLVFAKPPA--G--N-WSPNKQLIGF-------KKVHVTAGALQSVRLD 582 (627)
Q Consensus 528 ~~v~v~VtNtG~~~G~evvQlY~~~p~--~--~-~~P~k~L~gF-------~kv~l~pGes~~V~~~ 582 (627)
-+++++|+|||+|+ +|+=-...- . . .--...=.|| +-|..+|||+++|++.
T Consensus 20 ~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~r~V~LV 82 (101)
T 4ep8_B 20 ATCRVVVENHGDRP----IQVGSHYHFAEVNPALKFDRQQAAGYRLNIPAGTAVRFEPGQKREVELV 82 (101)
T ss_dssp CEEEEEEEECSSSC----EEEETTSCGGGSCTTEESCTTTTTTEEECSSTTCEEEECTTCEEEEEEE
T ss_pred CEEEEEEEeCCCcc----eEEccccChhHcCcceeecHhhccCceecccCCCeEeeCCCCeEEEEEE
Confidence 47889999999999 888222110 0 0 0001111122 3456799999999874
No 17
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=88.82 E-value=0.89 Score=47.20 Aligned_cols=62 Identities=18% Similarity=0.165 Sum_probs=37.1
Q ss_pred eEEEEEEEEeCCCCCc------------ceEEEEEEeC---CCCC---CCcchhhccccccccCCCCeEEEEEEecCCCC
Q 006889 527 SLGLHVDIKNTGDMAG------------THTLLVFAKP---PAGN---WSPNKQLIGFKKVHVTAGALQSVRLDIHVCKH 588 (627)
Q Consensus 527 ~~~v~v~VtNtG~~~G------------~evvQlY~~~---p~~~---~~P~k~L~gF~kv~l~pGes~~V~~~l~~~~~ 588 (627)
.+.|.++|||+|+.+= .+.++++-.. |... .+..-.+..| +.|+||||.+++|.|....+
T Consensus 37 ~~~vk~tvtN~g~~~~~lLk~~~lD~~~~~~~~V~~~G~~v~f~Gi~~~~~~~~~d~f--~~L~pG~Sve~~~dla~~yd 114 (343)
T 2x3c_A 37 DVRVNLTLTNTGDKPIRLLKWQLPGSDDAPLFLVERDGQPVSYEGALIKRAAPTDKDF--QLLKAGQSLTVQAEVSGLYD 114 (343)
T ss_dssp CCEEEEEEEECSSSCEEEEGGGSCSSSCCCCEEEEETTEECCBCSCCCCCCCCCGGGE--EEECTTCEEEEEEECTTTBT
T ss_pred CeEEEEEEEeCCCCceEeeccCCCCcCccceEEEEeCCcccceeeEEEeccCCChhhc--EEeCCCCeEEEEEehhhccc
Confidence 4789999999998541 1234444211 1111 1111123455 56999999999999976445
Q ss_pred ce
Q 006889 589 LS 590 (627)
Q Consensus 589 ls 590 (627)
|+
T Consensus 115 Ls 116 (343)
T 2x3c_A 115 MS 116 (343)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 18
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=88.45 E-value=0.54 Score=40.80 Aligned_cols=52 Identities=19% Similarity=0.134 Sum_probs=31.1
Q ss_pred EEEEEEEEeCCCCCcceEEEEEEeCCCCCCCc-----chhhccc-------cccccCCCCeEEEEEEe
Q 006889 528 LGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSP-----NKQLIGF-------KKVHVTAGALQSVRLDI 583 (627)
Q Consensus 528 ~~v~v~VtNtG~~~G~evvQlY~~~p~~~~~P-----~k~L~gF-------~kv~l~pGes~~V~~~l 583 (627)
-+++++|+|||+|+ ||+=-...--...| ...=.|| +-|..+|||+++|++.=
T Consensus 26 ~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV~ 89 (126)
T 4ac7_B 26 EKTTIRVSNTGDRP----IQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELTE 89 (126)
T ss_dssp CEEEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEEE
T ss_pred cEEEEEEEeCCCCC----EEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEEE
Confidence 46899999999999 88822221100111 1111222 34567999999998753
No 19
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=88.45 E-value=0.54 Score=40.80 Aligned_cols=52 Identities=19% Similarity=0.134 Sum_probs=31.1
Q ss_pred EEEEEEEEeCCCCCcceEEEEEEeCCCCCCCc-----chhhccc-------cccccCCCCeEEEEEEe
Q 006889 528 LGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSP-----NKQLIGF-------KKVHVTAGALQSVRLDI 583 (627)
Q Consensus 528 ~~v~v~VtNtG~~~G~evvQlY~~~p~~~~~P-----~k~L~gF-------~kv~l~pGes~~V~~~l 583 (627)
-+++++|+|||+|+ ||+=-...--...| ...=.|| +-|..+|||+++|++.=
T Consensus 26 ~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV~ 89 (126)
T 4ubp_B 26 EKTTIRVSNTGDRP----IQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELTE 89 (126)
T ss_dssp CEEEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEEE
T ss_pred cEEEEEEEeCCCCC----EEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEEE
Confidence 46899999999999 88822221100111 1111222 34567999999998753
No 20
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=87.27 E-value=1.3 Score=45.45 Aligned_cols=55 Identities=13% Similarity=0.243 Sum_probs=37.0
Q ss_pred eEEEEEEEEeCCCCCcceEEEE---------EEeCCCC--CCCcchhhccccccc------cCCCCeEEEEEEecC
Q 006889 527 SLGLHVDIKNTGDMAGTHTLLV---------FAKPPAG--NWSPNKQLIGFKKVH------VTAGALQSVRLDIHV 585 (627)
Q Consensus 527 ~~~v~v~VtNtG~~~G~evvQl---------Y~~~p~~--~~~P~k~L~gF~kv~------l~pGes~~V~~~l~~ 585 (627)
+++++++|||+|+.+ |+| |+.+... ...-..+|.+.+... |+||||++|+++...
T Consensus 265 ~l~~~~~VtN~g~~p----vrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL~vsd~~pI~PGETr~~~v~a~d 336 (382)
T 1yew_A 265 AMRMKLTITNHGNSP----IRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGLSVSDNSPLAPGETRTVDVTASD 336 (382)
T ss_dssp EEEEEEEEEECSSSC----EEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCEEESCCSCBCTTCEEEEEEEEEC
T ss_pred EEEEEEEEEcCCCCc----eEeeeEEeccEEEeCCcccccCCCChHHhhccCCceeCCCCCcCCCceeEEEEEeeh
Confidence 699999999998866 666 3332111 122244666544332 899999999998864
No 21
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=86.94 E-value=0.92 Score=40.11 Aligned_cols=54 Identities=15% Similarity=0.382 Sum_probs=30.9
Q ss_pred EEEEEEEeCCCCC----cceEEEEEEeCCC------------CCCCc---chhhccccccccCCCCeEEEEEEec
Q 006889 529 GLHVDIKNTGDMA----GTHTLLVFAKPPA------------GNWSP---NKQLIGFKKVHVTAGALQSVRLDIH 584 (627)
Q Consensus 529 ~v~v~VtNtG~~~----G~evvQlY~~~p~------------~~~~P---~k~L~gF~kv~l~pGes~~V~~~l~ 584 (627)
+|+|+++|+|..+ +-++|-.=-.... ..--| .+.| +.-..|.||||.+|+|+++
T Consensus 27 ~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~--~~t~~l~pGes~~vtf~~~ 99 (128)
T 2iaa_C 27 EFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVI--AHTSVIGGGETDSVTFDVS 99 (128)
T ss_dssp EEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEE--EECCCBCTTCEEEEEEESS
T ss_pred EEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhh--ccceeeCCCCEEEEEEecc
Confidence 6789999999987 7776533100000 00000 0111 1112479999999999986
No 22
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=86.84 E-value=1.1 Score=50.00 Aligned_cols=102 Identities=14% Similarity=0.139 Sum_probs=63.1
Q ss_pred cccccCcCCCCCCceeCCCccCCCcccccccccccccccccccccccccccCCCCCceEEEEEEEEeCCC--CCcceEEE
Q 006889 470 VVFPFGHGMSYTTFAHTLSKAPNQFSVPIATSLYAFKNTTISSNAIRVAHTNCNDAMSLGLHVDIKNTGD--MAGTHTLL 547 (627)
Q Consensus 470 ~~ypFG~GLSYTtF~ys~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~VtNtG~--~~G~evvQ 547 (627)
.+|..|.|+.|..|..+.+..... .. +.+ ...+. .+. +.+|+++|+|.+. ++|.+++
T Consensus 337 ~~ye~~~~i~~~~~~~~~l~~~~~-~~-----------~~~---~~~~~----~g~-~~~~~~~vtn~~~~~~~~~~~~- 395 (601)
T 1w8o_A 337 LLYEPGTGIRYANFNLAWLGGICA-PF-----------TIP---DVALE----PGQ-QVTVPVAVTNQSGIAVPKPSLQ- 395 (601)
T ss_dssp EEECCSSEEEEEEECHHHHTBCSC-CE-----------ECC---CEEEC----TTC-EEEEEEEEECCSSSCBSSCEEE-
T ss_pred EEEecCCcceEEEecHHHhccccC-CC-----------cCc---cceec----CCc-eeEEEEEEECCCceeccCceEE-
Confidence 467777788888888776552110 00 000 01111 122 6899999999977 7898887
Q ss_pred EEEeCCCCCCCcchhhccccccccCCCCeEEEEEEecCCCCceEEeCCCCEEecCeEEEEEEeC
Q 006889 548 VFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHSLHIGD 611 (627)
Q Consensus 548 lY~~~p~~~~~P~k~L~gF~kv~l~pGes~~V~~~l~~~~~ls~~d~~~~~~~~~G~y~i~vG~ 611 (627)
||+..-... .+ .-..++||++.+|.|+|.. .+- +++|.|.+-+.-
T Consensus 396 ~~~~~~~~~-------~~-~~~~~~~g~~~t~~~~vt~-~~~----------~~~g~y~l~~~~ 440 (601)
T 1w8o_A 396 LDASPDWQV-------QG-SVEPLMPGRQAKGQVTITV-PAG----------TTPGRYRVGATL 440 (601)
T ss_dssp EECCTTSEE-------EE-EECCBCTTCEEEEEEEEEC-CTT----------CCCEEEEEEEEE
T ss_pred EecCCCcEE-------ec-cccccCCCCceEEEEEEec-CCC----------CCCCcEEeeEEE
Confidence 887433321 11 2267899999999888877 431 457777776553
No 23
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=86.20 E-value=0.92 Score=40.09 Aligned_cols=24 Identities=21% Similarity=0.281 Sum_probs=17.3
Q ss_pred ccCCCCeEEEEEEec---CCCCceEEe
Q 006889 570 HVTAGALQSVRLDIH---VCKHLSVVD 593 (627)
Q Consensus 570 ~l~pGes~~V~~~l~---~~~~ls~~d 593 (627)
.|.||||.+|+|+.+ +..+..||-
T Consensus 86 ~l~pGet~svtf~~~~l~~G~~Y~f~C 112 (128)
T 1nwp_A 86 VIGAGEKDSVTFDVSKLAAGEKYGFFC 112 (128)
T ss_dssp CBCTTCEEEEEEEGGGSCTTSCEEEEC
T ss_pred eeCCCCEEEEEEeccccCCCceEEEEE
Confidence 389999999999986 212355554
No 24
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.20 E-value=2.1 Score=36.24 Aligned_cols=61 Identities=10% Similarity=0.082 Sum_probs=37.1
Q ss_pred eEEEEEEEEeCCCCCcceEEEEEEeCCCCCCCcchhhccccccccCCCCeEEEEEEecCCCCceEEe
Q 006889 527 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVD 593 (627)
Q Consensus 527 ~~~v~v~VtNtG~~~G~evvQlY~~~p~~~~~P~k~L~gF~kv~l~pGes~~V~~~l~~~~~ls~~d 593 (627)
..+.+++++|+|+.+.. .-+. +........--....+-.|+||++.+|++++.+ +....++
T Consensus 27 ~~~~~~~l~N~g~~p~~----~~~~-~~~~~~~~~f~v~p~~g~i~pg~~~~i~V~f~~-~~~g~f~ 87 (112)
T 2e6j_A 27 AHCYEAILYNKGSIDAL----FNMT-PPTSALGACFVFSPKEGIIEPSGVQAIQISFSS-IILGNFE 87 (112)
T ss_dssp CEEEEEEEEECCSSCEE----EEEC-CCSSHHHHHCEEESSEEEECTTBCCEEEEEECC-CCCEEEE
T ss_pred EEEEEEEEEECCcceEE----EEEe-cCCccccCcEEEECCcCEECCCCEEEEEEEEEC-CCcceEE
Confidence 46789999999998622 2111 111000000011233456999999999999999 6666654
No 25
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=83.43 E-value=1.7 Score=38.39 Aligned_cols=15 Identities=20% Similarity=0.412 Sum_probs=13.6
Q ss_pred ccCCCCeEEEEEEec
Q 006889 570 HVTAGALQSVRLDIH 584 (627)
Q Consensus 570 ~l~pGes~~V~~~l~ 584 (627)
.|.||||.+|+|+++
T Consensus 86 ~l~pGet~svtf~~~ 100 (129)
T 1cuo_A 86 IIGGGEKTSVKFKVS 100 (129)
T ss_dssp CBCTTCEEEEEEEGG
T ss_pred EECCCCEEEEEEecc
Confidence 479999999999986
No 26
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=82.50 E-value=1.7 Score=38.33 Aligned_cols=15 Identities=27% Similarity=0.465 Sum_probs=13.6
Q ss_pred ccCCCCeEEEEEEec
Q 006889 570 HVTAGALQSVRLDIH 584 (627)
Q Consensus 570 ~l~pGes~~V~~~l~ 584 (627)
.|.||||.+|+|+.+
T Consensus 86 ~l~pGet~svtf~~~ 100 (129)
T 2ccw_A 86 VIGGGESDSVTFDVS 100 (129)
T ss_dssp CBCTTCEEEEEEEGG
T ss_pred EECCCCEEEEEEecc
Confidence 479999999999986
No 27
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=81.31 E-value=2.7 Score=37.56 Aligned_cols=55 Identities=15% Similarity=0.027 Sum_probs=33.4
Q ss_pred eEEEEEEEEeCCCCCcceEEEEEEeCCC-CCCCcchhhccc-cccccCCCCeEEEEEEecC
Q 006889 527 SLGLHVDIKNTGDMAGTHTLLVFAKPPA-GNWSPNKQLIGF-KKVHVTAGALQSVRLDIHV 585 (627)
Q Consensus 527 ~~~v~v~VtNtG~~~G~evvQlY~~~p~-~~~~P~k~L~gF-~kv~l~pGes~~V~~~l~~ 585 (627)
..+-+++|+|||.++- +.-...+. ........|.=. .+-.|.|||+.+|++++..
T Consensus 44 ~~~~~l~I~Ntg~vpa----~F~f~~~~~~~~~~~~wl~v~P~~G~L~Pge~~~I~v~~~v 100 (140)
T 3qbt_B 44 LQKEKFQISNNGQVPC----HFSFIPKLNDSQYCKPWLRAEPFEGYLEPNETVDISLDVYV 100 (140)
T ss_dssp CEEEEEEEEECSSSCE----EEEEECCTTCSSSSCTTEEEESCEEEECTTCEEEEEEEECB
T ss_pred eeeeEEEEEcCCccce----EEEEecCCCchhhhhHhhhcCCcccccCCCCeeEEEEEEEE
Confidence 3577999999999984 44333322 111000011100 2336999999999999986
No 28
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=81.14 E-value=1.2 Score=41.19 Aligned_cols=15 Identities=27% Similarity=0.306 Sum_probs=13.4
Q ss_pred ccCCCCeEEEEEEec
Q 006889 570 HVTAGALQSVRLDIH 584 (627)
Q Consensus 570 ~l~pGes~~V~~~l~ 584 (627)
.|.|||+.+|+|+++
T Consensus 125 ~l~pGet~svtf~~~ 139 (167)
T 3ay2_A 125 LIGGGEESSLTLDPA 139 (167)
T ss_dssp CBCTTCEEEEEECGG
T ss_pred eeCCCCEEEEEEecC
Confidence 479999999999976
No 29
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.19 E-value=2.8 Score=36.30 Aligned_cols=59 Identities=10% Similarity=0.090 Sum_probs=39.2
Q ss_pred eEEEEEEEEeCCCCCcceEEEEEEeCCCCCCCcchhhccccccccCCCCeEEEEEEecCCCCceEEeCCC
Q 006889 527 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDKFG 596 (627)
Q Consensus 527 ~~~v~v~VtNtG~~~G~evvQlY~~~p~~~~~P~k~L~gF~kv~l~pGes~~V~~~l~~~~~ls~~d~~~ 596 (627)
+-+.++.|+|+|..+++--.+. ..|- .-.|. +-.|+|||+.+|++++.+ .....|+..-
T Consensus 42 ~~~~~~~l~N~g~~~~~f~~~~--~~~F-~i~P~-------~g~L~pg~~~~i~V~F~P-~~~g~~~~~l 100 (122)
T 2ys4_A 42 STQKILLVRNIGNKNAVFHIKT--CRPF-SIEPA-------IGTLNVGESMQLEVEFEP-QSVGDHSGRL 100 (122)
T ss_dssp CEEEEEEEECCSSSCEEEEEEC--CTTE-EEESS-------EEEECTTCEEEEEEEECC-SSSBCCCCBC
T ss_pred eEEEEEEEEECCCCCEEEEEec--CCCe-EEECC-------cCEECCCCEEEEEEEEEc-CCCccEEEEE
Confidence 4678999999999886533221 1110 12343 245899999999999999 6666654433
No 30
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=78.09 E-value=4 Score=42.39 Aligned_cols=54 Identities=17% Similarity=0.265 Sum_probs=34.0
Q ss_pred eEEEEEEEEeCCCCCcceEEEE--E-------EeCCCCC--CCcchhhc---c--ccccccCCCCeEEEEEEecC
Q 006889 527 SLGLHVDIKNTGDMAGTHTLLV--F-------AKPPAGN--WSPNKQLI---G--FKKVHVTAGALQSVRLDIHV 585 (627)
Q Consensus 527 ~~~v~v~VtNtG~~~G~evvQl--Y-------~~~p~~~--~~P~k~L~---g--F~kv~l~pGes~~V~~~l~~ 585 (627)
+++++++|||+|+.+ ||| | +.+.... ....++|. | =.. -|+||||++|+++...
T Consensus 299 ~l~~~~~VtN~g~~p----vrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~s~~-pI~PGETrt~~V~a~d 368 (419)
T 3rfr_A 299 ELTINVKVKNGTSQP----VRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLSNDD-VIAPGESKEIVVKIQD 368 (419)
T ss_dssp EEEEEEEEECCSSSC----BEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCCCCC-CBCTTCEEEEEEEEEC
T ss_pred EEEEEEEEecCCCCc----eEEeeEEEccEEEeCcccccCCCCCchhhhhccCCCCCC-CcCCCcceEEEEEeeh
Confidence 699999999998865 565 2 2211101 11123332 2 233 5999999999999875
No 31
>3qga_A UREA2, fusion of urease beta and gamma subunits; iron metalloenzyme, alpha-beta barrel, hydrolase; HET: FME KCX; 3.00A {Helicobacter mustelae} PDB: 3qgk_A*
Probab=76.71 E-value=2.2 Score=40.62 Aligned_cols=51 Identities=18% Similarity=0.123 Sum_probs=30.2
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCCCCc-----chhhccc-------cccccCCCCeEEEEEEe
Q 006889 529 GLHVDIKNTGDMAGTHTLLVFAKPPAGNWSP-----NKQLIGF-------KKVHVTAGALQSVRLDI 583 (627)
Q Consensus 529 ~v~v~VtNtG~~~G~evvQlY~~~p~~~~~P-----~k~L~gF-------~kv~l~pGes~~V~~~l 583 (627)
+++++|+|||+|+ ||+=-...--...| ...=.|| +-|..+||++++|++.=
T Consensus 126 ~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV~ 188 (225)
T 3qga_A 126 ITELKVTNKGPKS----LHVGSHFHFFEANRALEFDREKAYGKRLDIPSGNTLRIGAGETKTVHLIP 188 (225)
T ss_dssp CEEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEEE
T ss_pred eEEEEEEECCCCc----eeeccccchhhcCchhhccHHHhCCcccccCCCCeEeeCCCCeeEEEEEE
Confidence 5789999999999 88822221100111 1111122 34567999999998753
No 32
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=75.73 E-value=4.6 Score=35.38 Aligned_cols=55 Identities=22% Similarity=0.398 Sum_probs=34.4
Q ss_pred EEEEEEEeCCCCC----cceEEEEEEeCCCCC------CCcc--------hhhccccccccCCCCeEEEEEEec
Q 006889 529 GLHVDIKNTGDMA----GTHTLLVFAKPPAGN------WSPN--------KQLIGFKKVHVTAGALQSVRLDIH 584 (627)
Q Consensus 529 ~v~v~VtNtG~~~----G~evvQlY~~~p~~~------~~P~--------k~L~gF~kv~l~pGes~~V~~~l~ 584 (627)
+|+++++|+|+.+ |-++|-.=-..+... .-|. .....-.++ |.|||+.+|+|+.+
T Consensus 28 ~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~-l~pGes~~vtf~~~ 100 (125)
T 3fsa_A 28 QFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKL-IGSGEKDSVTFDVS 100 (125)
T ss_dssp EEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCC-BCTTCEEEEEEEGG
T ss_pred EEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccce-eCCCcEEEEEEeCc
Confidence 6889999999998 888887621111100 0111 111122222 89999999999987
No 33
>1e9y_A Urease subunit alpha; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.85.3.1 d.8.1.1 PDB: 1e9z_A*
Probab=75.04 E-value=2.1 Score=41.08 Aligned_cols=51 Identities=22% Similarity=0.194 Sum_probs=30.6
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCCCCc-----chhhccc-------cccccCCCCeEEEEEEe
Q 006889 529 GLHVDIKNTGDMAGTHTLLVFAKPPAGNWSP-----NKQLIGF-------KKVHVTAGALQSVRLDI 583 (627)
Q Consensus 529 ~v~v~VtNtG~~~G~evvQlY~~~p~~~~~P-----~k~L~gF-------~kv~l~pGes~~V~~~l 583 (627)
+++++|+|||+|+ ||+=-...--...| ...=.|| .-|..+||++++|++.=
T Consensus 126 ~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTAVRFEPG~~r~V~LV~ 188 (238)
T 1e9y_A 126 AVSVKVKNVGDRP----VQIGSHFHFFEVNRCLDFDREKTFGKRLDIAAGTAVRFEPGEEKSVELID 188 (238)
T ss_dssp CCEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSSTTCEEEECTTCEEEEEEEE
T ss_pred eEEEEEEeCCCCc----eEeccccchHhcCccccccHHHhCCcccCcCCCCeEeeCCCCeeEEEEEE
Confidence 5789999999999 88822221110111 1111222 34567999999998754
No 34
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=66.49 E-value=13 Score=32.75 Aligned_cols=18 Identities=6% Similarity=-0.021 Sum_probs=14.5
Q ss_pred ccccCCCCeEEEEEEecC
Q 006889 568 KVHVTAGALQSVRLDIHV 585 (627)
Q Consensus 568 kv~l~pGes~~V~~~l~~ 585 (627)
...|.|||+.+|+|+.+.
T Consensus 98 t~~l~pGet~~v~f~~~~ 115 (139)
T 2aan_A 98 SPLANGNETVEVTFTAPA 115 (139)
T ss_dssp CCCBCTTCEEEEEEECCS
T ss_pred ccccCCCCEEEEEEECCC
Confidence 345899999999998754
No 35
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=65.81 E-value=4.8 Score=39.07 Aligned_cols=57 Identities=14% Similarity=0.084 Sum_probs=36.8
Q ss_pred EEEeCCCCCcceEEEEEEeCCCCC--CCc--------chhhccccccccCCCCeEEEEEEecCCCCceEEeCC
Q 006889 533 DIKNTGDMAGTHTLLVFAKPPAGN--WSP--------NKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDKF 595 (627)
Q Consensus 533 ~VtNtG~~~G~evvQlY~~~p~~~--~~P--------~k~L~gF~kv~l~pGes~~V~~~l~~~~~ls~~d~~ 595 (627)
++.|-|. |.=+|+||.+.+... ..| .+.+..+.++.|.||||- +|.+.-.-++|-+.
T Consensus 130 diinRgG--G~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESi----Tl~Pg~~H~F~ae~ 196 (246)
T 3kmh_A 130 DIINRGG--GNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESI----CLPPGLYHSFWAEA 196 (246)
T ss_dssp EEEEEEE--SCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEE----EECTTEEEEEEECT
T ss_pred cEEecCC--CeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeE----ecCCCCEEEEEecC
Confidence 3455554 577788888877642 222 467888899999999985 66662222455443
No 36
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=65.23 E-value=9.1 Score=36.68 Aligned_cols=51 Identities=14% Similarity=0.219 Sum_probs=34.3
Q ss_pred eEEEEEEEEeCCCCCcceEEEEEEeCCCCCCCcchhhccccccccCCCCeEEEEEEecC
Q 006889 527 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHV 585 (627)
Q Consensus 527 ~~~v~v~VtNtG~~~G~evvQlY~~~p~~~~~P~k~L~gF~kv~l~pGes~~V~~~l~~ 585 (627)
..+.+++++|+|+..-. +..+-.+.. -..|. +.|-.|+|||+.+|++++..
T Consensus 135 ~~~~~f~i~N~G~~pL~-I~~v~~scg--ct~~~-----~~~~~i~PGe~~~i~v~~~~ 185 (220)
T 2qsv_A 135 TTKAAIEIRNVGAGPLR-LHSVTTRNP--ALTAV-----PDRTEIKPGGSTLLRIAVDP 185 (220)
T ss_dssp CEEEEEEEEECSSSCEE-EEEEEECST--TEEEE-----ESCSEECTTCEEEEEEEECH
T ss_pred eEEEEEEEEECCCCCEE-EEEEEeCCC--CEeee-----cCCccCCCCCEEEEEEEEec
Confidence 57889999999998622 112211111 12222 56777999999999999988
No 37
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=62.52 E-value=6.1 Score=46.51 Aligned_cols=58 Identities=17% Similarity=0.283 Sum_probs=38.1
Q ss_pred eEEEEEEEEeCCCCCcceEEEEEEeC--CCCC---CCcchhhccc--cccccCCCCeEEEEEEecC
Q 006889 527 SLGLHVDIKNTGDMAGTHTLLVFAKP--PAGN---WSPNKQLIGF--KKVHVTAGALQSVRLDIHV 585 (627)
Q Consensus 527 ~~~v~v~VtNtG~~~G~evvQlY~~~--p~~~---~~P~k~L~gF--~kv~l~pGes~~V~~~l~~ 585 (627)
+++++++|||+|+.+...+.++-+.. |... ..|. .|.-+ +++.|+|||+++++++++.
T Consensus 500 ~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~-~l~~~~~~~vtv~ag~~~~~~vt~~~ 564 (926)
T 1xf1_A 500 KFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPK-VLYETSWQKITIPANSSKQVTVPIDA 564 (926)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEE-EEEECCCEEEEECTTEEEEEEEEEEC
T ss_pred cEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccc-eeEeccCCeEEECCCCEEEEEEEEEc
Confidence 58899999999987654444433322 2221 2343 34322 4567999999999999986
No 38
>4dzg_A PLIG; lysozyme inhibitor, G-type lysozyme binding, hydrolase inhib; HET: MLY; 2.02A {Aeromonas hydrophila subsp}
Probab=59.52 E-value=11 Score=32.29 Aligned_cols=44 Identities=16% Similarity=0.191 Sum_probs=24.3
Q ss_pred cccCCCCeEEEEEEecCCCCceEEeCC---------------CCE--Eec-CeEEEEEEeCC
Q 006889 569 VHVTAGALQSVRLDIHVCKHLSVVDKF---------------GIR--RIP-MGEHSLHIGDL 612 (627)
Q Consensus 569 v~l~pGes~~V~~~l~~~~~ls~~d~~---------------~~~--~~~-~G~y~i~vG~s 612 (627)
+..++||+-+|+++-...-.|++++.+ +.| .|+ .|+|+|.|...
T Consensus 34 ~~a~aGQ~l~V~ls~~~~~~f~I~~P~~~~~~~l~~g~~~~~~~~~g~LP~sG~Y~i~V~~~ 95 (114)
T 4dzg_A 34 LVAXAGQTMTVXIGGSSNANFNVFAPGAQPGQAEAIGRNDGDGQWQGALPASGXYLIQVYQM 95 (114)
T ss_dssp CCC-CCCEEEC-CEESTTCEEEEECTTCCTTTSCCSEECCTTSCCEEECSSCC-CEEEEECC
T ss_pred EEecCCCEEEEEeCCCCcEEEEEECCCCCcccceeccccCCcceEEEEecCCCcEEEEEEec
Confidence 346777777777743321134444432 268 554 79999999964
No 39
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=46.69 E-value=45 Score=34.54 Aligned_cols=57 Identities=14% Similarity=0.028 Sum_probs=35.4
Q ss_pred eEEEEEEEEeCCCCCcceEEEEEEeC-CCCCCCcchhhccc-cccccCCCCeEEEEEEecCCCC
Q 006889 527 SLGLHVDIKNTGDMAGTHTLLVFAKP-PAGNWSPNKQLIGF-KKVHVTAGALQSVRLDIHVCKH 588 (627)
Q Consensus 527 ~~~v~v~VtNtG~~~G~evvQlY~~~-p~~~~~P~k~L~gF-~kv~l~pGes~~V~~~l~~~~~ 588 (627)
..+-+++|+|||.+. ++.-+.. +.....+...|.=. .+-.|.|||+.+|++++.. ++
T Consensus 47 ~~~~~l~i~N~g~~p----a~f~f~~~~~~~~~~~~wl~v~p~~g~l~Pge~~~i~l~~~v-~~ 105 (366)
T 3qis_A 47 LQKEKFQISNNGQVP----CHFSFIPKLNDSQYCKPWLRAEPFEGYLEPNETVDISLDVYV-SK 105 (366)
T ss_dssp CEEEEEEEEECSSSC----EEEEEECCTTCSSSSCTTEEEESCEEEECTTCEEEEEEEECB-CT
T ss_pred eEEEEEEEEecCCce----EEEEEEeCCCCCCCCCCcEEEeCCccEECCCCEEEEEEEEEE-CH
Confidence 467899999999998 4443333 22222211112111 1336999999999999987 44
No 40
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=46.30 E-value=40 Score=30.28 Aligned_cols=54 Identities=15% Similarity=0.085 Sum_probs=26.6
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCCCCcch-hhccccc--cccCCCC--eEEEEEEe
Q 006889 529 GLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNK-QLIGFKK--VHVTAGA--LQSVRLDI 583 (627)
Q Consensus 529 ~v~v~VtNtG~~~G~evvQlY~~~p~~~~~P~k-~L~gF~k--v~l~pGe--s~~V~~~l 583 (627)
+|+++++|.|+...-.++..=...+.. .-|.. .+..... ..|.||| +.+++|++
T Consensus 70 ~V~~~~tN~~~~~~H~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~ 128 (154)
T 2cal_A 70 TVDVTFINTNKGFGHSFDITKKGPPYA-VMPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP 128 (154)
T ss_dssp EEEEEEEECCTTCCCCCEEESCCSCCC-SSCCCCSEEEEBCCCCCCBTTBEEEEEEEECC
T ss_pred EEEEEEEcCCCCeeeEEEEeecCcchh-ccccccccccccccccccCCCCceEEEEEEEE
Confidence 688999998643334443331111111 11110 0111111 1579999 77777777
No 41
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=45.09 E-value=50 Score=31.56 Aligned_cols=53 Identities=19% Similarity=0.118 Sum_probs=35.2
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCC---CCcchhhccccccccCCCCeEEEEEEecC
Q 006889 529 GLHVDIKNTGDMAGTHTLLVFAKPPAGN---WSPNKQLIGFKKVHVTAGALQSVRLDIHV 585 (627)
Q Consensus 529 ~v~v~VtNtG~~~G~evvQlY~~~p~~~---~~P~k~L~gF~kv~l~pGes~~V~~~l~~ 585 (627)
.++++|+|+|+.+ -.||..+.+-... ..|..-.=-. ..|+||+.++|+|....
T Consensus 29 ~~sl~l~N~~~~p--~LvQswv~~~~~~~~~~~pFivtPPl--~Rl~p~~~q~lRI~~~~ 84 (218)
T 4ay0_A 29 GVMVSVKNTQDYP--VLIQSRIYDENKEKESEDPFVVTPPL--FRLDAKQQNSLRIAQAG 84 (218)
T ss_dssp CEEEEEECCSSSC--EEEEEEEECTTSCCCSSCSEEEESSE--EEECTTCEEEEEEEECS
T ss_pred EEEEEEEcCCCCC--EEEEEEEecCCCCccccCCEEECCCe--EEeCCCCceEEEEEecC
Confidence 5789999999864 7999999764432 2221111001 24899999999997654
No 42
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=42.15 E-value=73 Score=27.60 Aligned_cols=17 Identities=24% Similarity=0.247 Sum_probs=14.4
Q ss_pred cccCCCCeEEEEEEecC
Q 006889 569 VHVTAGALQSVRLDIHV 585 (627)
Q Consensus 569 v~l~pGes~~V~~~l~~ 585 (627)
+.|.||++.+++|+++.
T Consensus 98 ~~l~pG~~~~~~~~~~~ 114 (140)
T 1qhq_A 98 AMLNAGESGSVTFRTPA 114 (140)
T ss_dssp CCBCTTEEEEEEEECCS
T ss_pred eeeCCCceeEEEEEeCC
Confidence 45899999999999864
No 43
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=41.11 E-value=69 Score=31.40 Aligned_cols=54 Identities=11% Similarity=0.102 Sum_probs=35.5
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCCCCcchh---hcccccc-ccCCCCeEEEEEEec
Q 006889 529 GLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQ---LIGFKKV-HVTAGALQSVRLDIH 584 (627)
Q Consensus 529 ~v~v~VtNtG~~~G~evvQlY~~~p~~~~~P~k~---L~gF~kv-~l~pGes~~V~~~l~ 584 (627)
.++++|+|+|+. --.||..+.+-.....|.+. +.--=-+ .|+||++++|+|...
T Consensus 45 ~~sl~l~N~~~~--P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl~pg~~q~lRI~~~ 102 (257)
T 3q48_A 45 EVTLRVSNTSGT--PVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRVEPNGGAVLRIAYL 102 (257)
T ss_dssp EEEEEEEECSSS--CEEEEEEEESSCCSSCGGGGCCSEEEESSEEEECTTEEEEEEEEEC
T ss_pred EEEEEEEeCCCC--eEEEEEEEEcCCCccCcccccCCEEEcCCEEEECCCCceEEEEEEC
Confidence 588999999986 58999999864432122111 1111112 489999999999654
No 44
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=40.86 E-value=65 Score=31.37 Aligned_cols=56 Identities=9% Similarity=0.043 Sum_probs=36.9
Q ss_pred eEEEEEEEEeCCCCCcceEEEEEEeCCCCC-CCcchhhccc-cccccCCCCeEEEEEEecC
Q 006889 527 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGF-KKVHVTAGALQSVRLDIHV 585 (627)
Q Consensus 527 ~~~v~v~VtNtG~~~G~evvQlY~~~p~~~-~~P~k~L~gF-~kv~l~pGes~~V~~~l~~ 585 (627)
.+.+.++|-|..+..=+--|+|..++.... ..+. ..+ +++.|.||++++|.|.+.+
T Consensus 97 ~~~l~~~V~Ny~~~~~~v~V~l~~~~~~~~~~~~~---~~~~~~v~v~a~~~~~v~f~i~p 154 (252)
T 3hrz_B 97 QVEIRAILHNYVNEDIYVRVELLYNPAFCSASTKG---QRYRQQFPIKALSSRAVPFVIVP 154 (252)
T ss_dssp CEEEEEEEEECSSSCEEEEEEECCCTTEEESCCSS---CCEEEEEEECTTEEEEEEEEEEE
T ss_pred EEEEEEEEEcccCceEEEEEEEEcCCceEeecCCC---CceEEEEEECCCCeEEEEEEEEe
Confidence 689999999998876555555554332211 1111 112 3467999999999999987
No 45
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=39.70 E-value=23 Score=41.15 Aligned_cols=51 Identities=18% Similarity=0.198 Sum_probs=30.6
Q ss_pred EEEEEEEEeCCCCCcceEEEEEEeCCCCCCCcc---hhhccc---------cccccCCCCeEEEEEE
Q 006889 528 LGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPN---KQLIGF---------KKVHVTAGALQSVRLD 582 (627)
Q Consensus 528 ~~v~v~VtNtG~~~G~evvQlY~~~p~~~~~P~---k~L~gF---------~kv~l~pGes~~V~~~ 582 (627)
-.++++|+|||+|+ +|+=-...--...|. -+.++| .-|..+|||+|+|++.
T Consensus 151 ~~~~~~v~~~~~r~----~~v~sh~hf~e~n~~l~fdr~~~~g~rl~~~~g~~~rf~pg~~~~v~l~ 213 (840)
T 4gy7_A 151 KAVILKVTSKGDRP----IQVGSHYHFIEVNPYLTFDRRKAYGMRLNIAAGTAVRFEPGDCKSVTLV 213 (840)
T ss_dssp EEEEEEEEECCSSC----EEEETTSCGGGSCTTEEBCHHHHTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred ceEEEEEEeCCCCc----eEeccccchhhcCcccccchhhhccccccccCCCceeeCCCCeeEEEEE
Confidence 47899999999999 887222211101110 011111 2356799999999984
No 46
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=39.14 E-value=32 Score=28.67 Aligned_cols=41 Identities=12% Similarity=0.293 Sum_probs=26.1
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCCCCcchhhccccccccCCCCeEEEEEEecC
Q 006889 529 GLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHV 585 (627)
Q Consensus 529 ~v~v~VtNtG~~~G~evvQlY~~~p~~~~~P~k~L~gF~kv~l~pGes~~V~~~l~~ 585 (627)
+|++.++|.+.. -.-+. + | .+ |+ +..+.|||+.+++|+.+.
T Consensus 47 ~V~~~~~n~d~~--~H~~~--i--~--------~~-~~-~~~i~pG~~~~~~f~~~~ 87 (112)
T 1iby_A 47 AVKVVVENKSPI--SEGFS--I--D--------AF-GV-QEVIKAGETKTISFTADK 87 (112)
T ss_dssp EEEEEEEECSSS--CEEEE--E--G--------GG-TE-EEEECTTCEEEEEEECCS
T ss_pred EEEEEEEECCCC--eEEEE--E--c--------CC-Cc-eeEeCCCCEEEEEEECCC
Confidence 678888999864 11111 1 1 11 22 567999999999998654
No 47
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=39.10 E-value=55 Score=26.60 Aligned_cols=17 Identities=18% Similarity=0.272 Sum_probs=13.5
Q ss_pred cccCCCCeEEEEEEecC
Q 006889 569 VHVTAGALQSVRLDIHV 585 (627)
Q Consensus 569 v~l~pGes~~V~~~l~~ 585 (627)
..|.||++.+++|+.+.
T Consensus 61 ~~~~pg~~~~~~~t~~~ 77 (100)
T 4hci_A 61 VVVESGKEKNITVKPKS 77 (100)
T ss_dssp EEECTTCEEEEEECCCS
T ss_pred eeecCCcceeEEEeccc
Confidence 45899999988887654
No 48
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=37.92 E-value=1.5e+02 Score=27.99 Aligned_cols=52 Identities=13% Similarity=0.067 Sum_probs=31.9
Q ss_pred eEEEEEEEEeCCCCCcceEEEEEEeCCCCCCCcchhhcccc-ccccCCCCeEEEEEEecCCCCc
Q 006889 527 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFK-KVHVTAGALQSVRLDIHVCKHL 589 (627)
Q Consensus 527 ~~~v~v~VtNtG~~~G~evvQlY~~~p~~~~~P~k~L~gF~-kv~l~pGes~~V~~~l~~~~~l 589 (627)
..+.+++++|+|+.+=.= .++ +.|. -++.-. -..|+|||+.+++|+++. +.+
T Consensus 20 ~~~~~~~i~N~g~~pl~i-~~~--~~p~-------~~~~~~~~~~I~PG~~g~I~vt~~~-~~~ 72 (220)
T 2qsv_A 20 EGVVRLVVNNTDESDLQV-AVV--SLPS-------FVSLDDRAFRLQAREPRELNLSLAV-PRN 72 (220)
T ss_dssp CCEEEEEEEECSSSCEEE-EEE--ECCT-------TEECSCCEEEECSSSCEEEEEEECC-CTT
T ss_pred cceEEEEEEeCCCCceEE-Eec--cCCC-------ceEeeeCcceeCCCCceEEEEEEcc-hhc
Confidence 356799999999977221 111 1121 011101 145899999999999997 544
No 49
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=37.80 E-value=67 Score=31.16 Aligned_cols=52 Identities=10% Similarity=0.010 Sum_probs=33.9
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCC-CCcchhhccccccccCCCCeEEEEEEec
Q 006889 529 GLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIH 584 (627)
Q Consensus 529 ~v~v~VtNtG~~~G~evvQlY~~~p~~~-~~P~k~L~gF~kv~l~pGes~~V~~~l~ 584 (627)
.++++|+|+|+. --.||..+.+.... ..|..-.==. ..|+||+.++|+|...
T Consensus 39 ~~sl~l~N~~~~--P~LvQsWv~~~~~~~~~pfivtPPl--fRlep~~~q~lRIi~~ 91 (239)
T 4djm_A 39 GETLTVINDQDY--PMLVQSEVLSEDQKSPAPFVVTPPL--FRLDGQQSSRLRIVRT 91 (239)
T ss_dssp CEEEEEEECSSS--CEEEEEEEECTTSSSBCSEEEESSE--EEECTTEEEEEEEEEC
T ss_pred EEEEEEEeCCCC--cEEEEEEEEcCCCCccCCEEEcCCe--EEECCCCceEEEEEEC
Confidence 478899999976 47999999864332 1121000001 2489999999999654
No 50
>2lv4_A Putative outer membrane or exported protein; antivirulence, adhesion, protein binding; NMR {Salmonella enterica subsp}
Probab=35.78 E-value=1e+02 Score=26.66 Aligned_cols=65 Identities=11% Similarity=0.109 Sum_probs=41.7
Q ss_pred cchhhccccccccCCCCeEEEEEEecCCCC------------c------eEEeCCC-CEEecCeEEEE---EEeCCCceE
Q 006889 559 PNKQLIGFKKVHVTAGALQSVRLDIHVCKH------------L------SVVDKFG-IRRIPMGEHSL---HIGDLKHSI 616 (627)
Q Consensus 559 P~k~L~gF~kv~l~pGes~~V~~~l~~~~~------------l------s~~d~~~-~~~~~~G~y~i---~vG~ss~~~ 616 (627)
|--.+..-.|.-|.||||.+|++-+.- -+ . ..||... +-..-||+|+= +-|.|+..+
T Consensus 48 pDLtvisiDk~vL~PGESA~it~IvKD-id~nPIn~v~i~~~~~~~~~~g~Wd~g~~Kkg~~PGeY~q~iTY~G~s~~~i 126 (146)
T 2lv4_A 48 PDLTVMSIDKSVLSPGESATITTIVKD-IDGNPVNEVHINKTVARENLKGLWDYGPLKKENVPGKYTQVITYRGHSNERI 126 (146)
T ss_dssp GGGCEEECCCCCBCTTCEEEEEEECBB-TTSCBCCCCCCBCCEECSCSSSEEEECCCEECSSSSEEEEEEEEETTCCCEE
T ss_pred CCcEEEecCccccCCCcceEEEEEEEe-CCCCcccceeeeeeeeccccccceeecceecCCCCcceEEEEEEcCCCCceE
Confidence 334455667888999999999987643 11 1 2343221 12345899975 457888888
Q ss_pred EEEEEEcc
Q 006889 617 SLQANLEG 624 (627)
Q Consensus 617 ~~~~~~~~ 624 (627)
.++.+--|
T Consensus 127 ~l~yky~g 134 (146)
T 2lv4_A 127 DISFKYAM 134 (146)
T ss_dssp EEEEECST
T ss_pred EEEeeeee
Confidence 88776544
No 51
>4g9s_B Inhibitor of G-type lysozyme, goose-type lysozyme; hydrolase inhibitor, hydrolase-hydrolase inhibitor; HET: FLC; 0.95A {Escherichia coli} PDB: 4dy3_A* 4dxz_A* 4dy5_A
Probab=35.31 E-value=72 Score=26.77 Aligned_cols=12 Identities=25% Similarity=0.498 Sum_probs=9.9
Q ss_pred Eec-CeEEEEEEe
Q 006889 599 RIP-MGEHSLHIG 610 (627)
Q Consensus 599 ~~~-~G~y~i~vG 610 (627)
+|+ .|+|+|.|.
T Consensus 78 ~LP~sG~Y~I~V~ 90 (111)
T 4g9s_B 78 SLPASGKYELRVL 90 (111)
T ss_dssp ECSSSEEEEEEEE
T ss_pred EecCCccEEEEEE
Confidence 554 899999995
No 52
>2co7_B SAFB chaperone, putative fimbriae assembly chaperone; pilus subunit, adhesion, strand complementation, pathogenesis, fibril protein; 1.8A {Salmonella typhimurium} SCOP: b.1.11.1 b.7.2.1 PDB: 2co6_B
Probab=35.24 E-value=70 Score=30.55 Aligned_cols=53 Identities=11% Similarity=0.088 Sum_probs=34.6
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCC-CCcchhhccccccccCCCCeEEEEEEecC
Q 006889 529 GLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIHV 585 (627)
Q Consensus 529 ~v~v~VtNtG~~~G~evvQlY~~~p~~~-~~P~k~L~gF~kv~l~pGes~~V~~~l~~ 585 (627)
.++++|+|+|+. .-.||..+.+.... ..|.--+=-. ..|+||++++|+|....
T Consensus 29 ~~sl~l~N~~~~--p~LvQsWv~~~~~~~~~pfivtPPl--~rl~p~~~q~lRI~~~~ 82 (221)
T 2co7_B 29 GATLSVSNPQNY--PILVQSSVKAADKSSPAPFLVMPPL--FRLEANQQSQLRIVRTG 82 (221)
T ss_dssp CEEEEEECCSSS--CEEEEEEEEETTSSSBCSEEEESSE--EEECTTCEEEEEEEECC
T ss_pred EEEEEEEcCCCC--cEEEEEEEecCCCCccCCEEEeCCE--EEECCCCceEEEEEECC
Confidence 478899999976 67999999864332 1111000001 24899999999996543
No 53
>2xwx_A GBPA, glcnac-binding protein A; chitin-binding protein; 1.80A {Vibrio cholerae}
Probab=34.76 E-value=68 Score=33.55 Aligned_cols=61 Identities=18% Similarity=0.257 Sum_probs=47.8
Q ss_pred eEEEEEEEEeCCCCCcceEEEEEEeCCCCCCCcchhhccccccccCCCCeEEEEEEecCCCCceEEeCCCCEEecCeEEE
Q 006889 527 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHS 606 (627)
Q Consensus 527 ~~~v~v~VtNtG~~~G~evvQlY~~~p~~~~~P~k~L~gF~kv~l~pGes~~V~~~l~~~~~ls~~d~~~~~~~~~G~y~ 606 (627)
.+++.++|+=+|++ -|.++|-+.. ++.+++.+..|.-+..+.++++|.. +++|.|.
T Consensus 312 ~~~l~f~~~~~~~~----~v~~~v~d~~------~~~~~~~~~~v~~~~~~~~tl~ls~--------------~~aGhh~ 367 (391)
T 2xwx_A 312 PIQLDLTLEAQGEM----SAELTVYNHH------QKPLASWSQAMTDGELKSITLELSE--------------AKAGHHM 367 (391)
T ss_dssp CCEEEEEEEEESSE----EEEEEEECTT------SCEEEEEEEEECTTCEEEEEEECSC--------------CCSEEEE
T ss_pred cEEEEEEEEecCce----EEEEEEEcCC------CCccceeeEEEcCCCcceEEEEccC--------------CCCccEE
Confidence 46777777766664 4778887754 6888999999999999999999986 6789998
Q ss_pred EEEeC
Q 006889 607 LHIGD 611 (627)
Q Consensus 607 i~vG~ 611 (627)
+.|-.
T Consensus 368 lvv~~ 372 (391)
T 2xwx_A 368 LVSRI 372 (391)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87654
No 54
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=33.49 E-value=67 Score=29.96 Aligned_cols=54 Identities=22% Similarity=0.268 Sum_probs=35.5
Q ss_pred cchHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhHHHHHHHHHH-----hcCCCEEEEEecCc
Q 006889 325 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK-----ASRGPVVLVLMCGG 389 (627)
Q Consensus 325 ~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q~~Li~~v~~-----~~~kpvVVVl~~g~ 389 (627)
+...+..+....||.+|++.=.. +...|+.-+.+|+.+.. -.+||+.++..+|+
T Consensus 62 ~~~~~~~~~i~~AD~iVi~tP~Y-----------~~s~p~~LK~~iD~~~~~~~~~l~gK~v~~v~tsgg 120 (199)
T 4hs4_A 62 APVLTMAQQIATADAVVIVTPEY-----------NYSVPGVLKNAIDWLSRVSPQPLAGKPVALVTASPG 120 (199)
T ss_dssp HHHHHHHHHHHHSSEEEEEECCB-----------TTBCCHHHHHHHHHHTTSSSCTTTTCEEEEEEECSS
T ss_pred HHHHHHHHHHHhCCEEEEEcCcc-----------CCCcCHHHHHHHHHhcccCCcccCCCEEEEEEeCCC
Confidence 34566778889999999876321 45678888888888764 12455555544433
No 55
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=30.72 E-value=18 Score=37.31 Aligned_cols=56 Identities=16% Similarity=0.221 Sum_probs=31.9
Q ss_pred HHhhcCCEEEEEecCCcccccccCCCCCCCCChhHH----HHHHHHHHhcCCCEEEEEecCcceec
Q 006889 332 VAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQ----ELVSRVAKASRGPVVLVLMCGGPVDV 393 (627)
Q Consensus 332 ~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q~----~Li~~v~~~~~kpvVVVl~~g~P~~l 393 (627)
++.+.||+||++.|..+ .+|.+|.+| -.... ++.+++.+.+.+.++|++ .+||++.
T Consensus 96 ~a~~~advVvi~aG~pr---kpGmtR~DL--l~~Na~I~~~~~~~i~~~a~~~~~vlv-vsNPvd~ 155 (345)
T 4h7p_A 96 VAFDGVAIAIMCGAFPR---KAGMERKDL--LEMNARIFKEQGEAIAAVAASDCRVVV-VGNPANT 155 (345)
T ss_dssp HHTTTCSEEEECCCCCC---CTTCCHHHH--HHHHHHHHHHHHHHHHHHSCTTCEEEE-CSSSHHH
T ss_pred HHhCCCCEEEECCCCCC---CCCCCHHHH--HHHhHHHHHHHHHHHHhhccCceEEEE-eCCCcch
Confidence 45689999999887653 455556543 12222 344455543333444443 4699875
No 56
>1g43_A Scaffolding protein; beta-sandwich, structural protein; 2.20A {Clostridium cellulolyticum} SCOP: b.2.2.2
Probab=30.04 E-value=19 Score=32.75 Aligned_cols=34 Identities=12% Similarity=0.108 Sum_probs=28.2
Q ss_pred ccccc--cccCCCCeEEEEEEecCCCCceEEeCCCCE
Q 006889 564 IGFKK--VHVTAGALQSVRLDIHVCKHLSVVDKFGIR 598 (627)
Q Consensus 564 ~gF~k--v~l~pGes~~V~~~l~~~~~ls~~d~~~~~ 598 (627)
.+|.. ..|+||++.+|.|.|.. .+.+-||....|
T Consensus 97 I~F~~~ag~l~pg~s~eiq~ri~~-~dws~~dqsNDy 132 (160)
T 1g43_A 97 VALNSDAGSLPAGGSIEIQTRFAR-NDWSNFDQSNDW 132 (160)
T ss_dssp EEECTTSCEECTTCEEEEEEEEEE-TTCCCEEGGGCT
T ss_pred EEecCCcceECCCCcEEEEEEEec-CCCCcccccCCc
Confidence 46765 67999999999999998 899999976554
No 57
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=29.06 E-value=84 Score=29.02 Aligned_cols=55 Identities=11% Similarity=0.073 Sum_probs=38.9
Q ss_pred cchHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhHHHHHHHHHH---------------hcCCCEEEEEecCc
Q 006889 325 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK---------------ASRGPVVLVLMCGG 389 (627)
Q Consensus 325 ~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q~~Li~~v~~---------------~~~kpvVVVl~~g~ 389 (627)
..+.+..+....||.+|++.=.. ...+|+.-+.+|+.+.. -.+|+++++..+|+
T Consensus 62 ~~~~~~~~~l~~AD~iV~~~P~y-----------~~~~pa~LK~~iD~v~~~g~~~~~~~~~~~~~l~gK~~~~i~t~g~ 130 (196)
T 3lcm_A 62 AEMEKYRDLVTWADHLIFIFPIW-----------WSGMPAILKGFIDRVFVADFAYSYKKVGLEGHLQGKSAWIITTHNT 130 (196)
T ss_dssp GGGHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHHHHSCBTTTEEECSSSEEESCTTCEEEEEEECSS
T ss_pred HHHHHHHHHHHhCCEEEEECchh-----------hccccHHHHHHHHHHccCCcceecCCCCcccCCCCCEEEEEEcCCC
Confidence 34567778889999999875211 45678888888888742 13577777777777
Q ss_pred c
Q 006889 390 P 390 (627)
Q Consensus 390 P 390 (627)
|
T Consensus 131 ~ 131 (196)
T 3lcm_A 131 P 131 (196)
T ss_dssp C
T ss_pred c
Confidence 7
No 58
>4b9f_A Cellulosomal-scaffolding protein A; sugar binding protein, cellulosome; 1.19A {Clostridium thermocellum atcc 27405} PDB: 1nbc_A
Probab=28.37 E-value=29 Score=31.30 Aligned_cols=35 Identities=14% Similarity=0.057 Sum_probs=29.3
Q ss_pred ccccccccCCCCeEEEEEEecCCCCceEEeCCCCEE
Q 006889 564 IGFKKVHVTAGALQSVRLDIHVCKHLSVVDKFGIRR 599 (627)
Q Consensus 564 ~gF~kv~l~pGes~~V~~~l~~~~~ls~~d~~~~~~ 599 (627)
.+|.-..|.||++.+|.|.|.. .+.+.||....|-
T Consensus 94 I~Ft~g~l~pg~~~eiQ~ri~~-~~~s~~d~snDyS 128 (152)
T 4b9f_A 94 ISFTGGTLEPGAHVQIQGRFAK-NDWSNYTQSNDYS 128 (152)
T ss_dssp EEESSCEECTTCEEEEEEEEEE-TTCCCEESTTCTT
T ss_pred EEccCceEcCCCcEEEEEEEEC-CCCcceeEcCCcC
Confidence 4677677999999999999998 8999999876653
No 59
>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...
Probab=28.29 E-value=1.2e+02 Score=35.32 Aligned_cols=57 Identities=11% Similarity=0.007 Sum_probs=39.7
Q ss_pred eEEEEEEEEeCCC-CCcceEEEEEEeCCCCC-CCcchhhccccccccCCCCeEEEEEEecC
Q 006889 527 SLGLHVDIKNTGD-MAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIHV 585 (627)
Q Consensus 527 ~~~v~v~VtNtG~-~~G~evvQlY~~~p~~~-~~P~k~L~gF~kv~l~pGes~~V~~~l~~ 585 (627)
.+.+.++|.|..+ .+++--|+|....+... ..+. ...=+++.|+||++++|.|.|.+
T Consensus 96 ~~~i~~~v~N~~~~~~~~v~v~l~~~~~~~~~~~~~--~~~~~~v~l~~~~~~~v~f~i~~ 154 (915)
T 2hr0_B 96 QVEIRAVLYNYRQNQELKVRVELLHNPAFCSLATTK--RRHQQTVTIPPKSSLSVPYVIVP 154 (915)
T ss_dssp CEEEEEEEEECCSSCCEEEEEEECCCTTEECSCCSS--SCEEEEEEECTTEEEEEEEEEEE
T ss_pred EEEEEEEEEcCCCCeeEEEEEEEecCCceEeecCCC--CcceeEEEECCCCeEEEEEEEEE
Confidence 6899999999998 88877777755433211 1110 01114567999999999999987
No 60
>1klf_A FIMC chaperone, chaperone protein FIMC; adhesin-chaperone complex, mannose-bound, chaperone/adhesin complex complex; HET: MAN; 2.79A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1 PDB: 1kiu_A* 3rfz_C 1qun_A 1bf8_A 1ze3_C 3bwu_C 3jwn_C
Probab=27.82 E-value=1.2e+02 Score=28.46 Aligned_cols=52 Identities=8% Similarity=0.032 Sum_probs=33.6
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCC-CCcchhhccccccccCCCCeEEEEEEe
Q 006889 529 GLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDI 583 (627)
Q Consensus 529 ~v~v~VtNtG~~~G~evvQlY~~~p~~~-~~P~k~L~gF~kv~l~pGes~~V~~~l 583 (627)
.++++|+|+|+. ---.||..+.+.... ..|.--+=-. ..|+||++++|+|..
T Consensus 17 ~~sl~l~N~~~~-~p~LvQsWi~~~~~~~~~pfivtPPl--~rl~p~~~q~lRI~~ 69 (205)
T 1klf_A 17 QVQLAVTNNDEN-STYLIQSWVENADGVKDGRFIVTPPL--FAMKGKKENTLRILD 69 (205)
T ss_dssp EEEEEEEECCSS-CCEEEEEEEEETTSCCCSSEEEESSE--EEECSSEEEEEEEEE
T ss_pred EEEEEEEcCCCC-CcEEEEEEEecCCCCccCCEEEcCCe--EEECCCCceEEEEEe
Confidence 578999999954 146899999864332 1221000001 248999999999977
No 61
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=27.53 E-value=40 Score=34.45 Aligned_cols=56 Identities=18% Similarity=0.314 Sum_probs=32.8
Q ss_pred HHhhcCCEEEEEecCCcccccccCCCCCCCCChh----HHHHHHHHHHhcCCCEEEEEecCcceec
Q 006889 332 VAARQADATVLVMGLDQSIEAEFIDRAGLLLPGR----QQELVSRVAKASRGPVVLVLMCGGPVDV 393 (627)
Q Consensus 332 ~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~----q~~Li~~v~~~~~kpvVVVl~~g~P~~l 393 (627)
+..+.+|+||++.|..+ .+|.+|.++ -.. -.++++++.+.+.+-+++++. +||+++
T Consensus 75 ~~~~daDvVvitAg~pr---kpG~tR~dl--l~~N~~i~~~i~~~i~~~~~~~~~vivv-sNPvd~ 134 (333)
T 5mdh_A 75 IAFKDLDVAILVGSMPR---RDGMERKDL--LKANVKIFKCQGAALDKYAKKSVKVIVV-GNPANT 134 (333)
T ss_dssp HHTTTCSEEEECCSCCC---CTTCCTTTT--HHHHHHHHHHHHHHHHHHSCTTCEEEEC-SSSHHH
T ss_pred HHhCCCCEEEEeCCCCC---CCCCCHHHH--HHHHHHHHHHHHHHHHHhCCCCeEEEEc-CCchHH
Confidence 45679999999877543 345566543 222 234566666654433333333 599887
No 62
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=27.42 E-value=15 Score=36.92 Aligned_cols=54 Identities=15% Similarity=0.369 Sum_probs=32.8
Q ss_pred HhhcCCEEEEEecCCcccccccCCCCCCCCChhH----HHHHHHHHHhcCCCEEEEEecCcceec
Q 006889 333 AARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQ----QELVSRVAKASRGPVVLVLMCGGPVDV 393 (627)
Q Consensus 333 ~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q----~~Li~~v~~~~~kpvVVVl~~g~P~~l 393 (627)
..+.||++|+..|..+ ..|.+|.+| -... .++++++++.+++ .++++. .||++.
T Consensus 66 ~~~~aDvVvitAG~pr---kpGmtR~dL--l~~Na~I~~~i~~~i~~~~p~-aivlvv-sNPvd~ 123 (294)
T 2x0j_A 66 LLKGSEIIVVTAGLAR---KPGMTRLDL--AHKNAGIIKDIAKKIVENAPE-SKILVV-TNPMDV 123 (294)
T ss_dssp GGTTCSEEEECCCCCC---CSSSCHHHH--HHHHHHHHHHHHHHHHTTSTT-CEEEEC-SSSHHH
T ss_pred HhCCCCEEEEecCCCC---CCCCchHHH--HHHHHHHHHHHHHHHHhcCCc-eEEEEe-cCcchh
Confidence 4679999999988654 445566543 1112 3455666665544 444444 599986
No 63
>3zqx_A Cellulose 1,4-beta-cellobiosidase; hydrolase, cellulose binding protein; 1.04A {Clostridium thermocellum} PDB: 2ylk_A
Probab=26.16 E-value=16 Score=32.83 Aligned_cols=35 Identities=23% Similarity=0.288 Sum_probs=28.3
Q ss_pred ccccccccCCC-CeEEEEEEecCCCCceEEeCCCCEE
Q 006889 564 IGFKKVHVTAG-ALQSVRLDIHVCKHLSVVDKFGIRR 599 (627)
Q Consensus 564 ~gF~kv~l~pG-es~~V~~~l~~~~~ls~~d~~~~~~ 599 (627)
.+|....|.|| ++.+|.|.|.. .+.+-||....|-
T Consensus 81 I~f~~g~l~pg~~s~eiQ~Ri~~-~dws~~dqsnDyS 116 (146)
T 3zqx_A 81 LEFKDVKLPAGGQTGEIQFVIRY-ADWSFHDQSNDYS 116 (146)
T ss_dssp EEECSCEECTTCBCCCEEEEEEE-TTCCCEEGGGCTT
T ss_pred EEeCCcEEcCCCceEEEEEEEEc-CCCccccccCCcc
Confidence 46777789998 47899999998 7899999876553
No 64
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=26.01 E-value=79 Score=29.63 Aligned_cols=54 Identities=19% Similarity=0.175 Sum_probs=36.6
Q ss_pred hHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhHHHHHHHHHHh---------------cCCCEEEEEecCcce
Q 006889 327 IGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKA---------------SRGPVVLVLMCGGPV 391 (627)
Q Consensus 327 ~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q~~Li~~v~~~---------------~~kpvVVVl~~g~P~ 391 (627)
..+..+....||.+|++.=.. ...+|..-+.+|+.+... .+|+++++..+|+|+
T Consensus 83 ~~~~~~~~~~aD~iv~~~P~y-----------~~~~p~~lK~~iD~~~~~~~~~~~~~~g~~g~l~gK~~~~i~t~g~~~ 151 (211)
T 3p0r_A 83 ADKYLNQFLEADKVVFGFPLW-----------NLTIPAVLHTYIDYLNRAGKTFKYTPEGPVGLIGDKKIALLNARGGVY 151 (211)
T ss_dssp HHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHHHHCCBTTTEECCTTCCEESCTTCEEEEEEEESSCC
T ss_pred HHHHHHHHHhCCEEEEEcChh-----------cccCCHHHHHHHHHHhccCceeccCCCCCccCCCCCEEEEEEeCCCCC
Confidence 455667788999999875221 356788778888887421 246677776667775
No 65
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=25.84 E-value=75 Score=35.67 Aligned_cols=57 Identities=18% Similarity=0.091 Sum_probs=39.5
Q ss_pred eEEEEEEEEeCCCCCcceEEEEEEeCCCC--CCCcchhhccc-cccccCCCCeEEEEEEecC
Q 006889 527 SLGLHVDIKNTGDMAGTHTLLVFAKPPAG--NWSPNKQLIGF-KKVHVTAGALQSVRLDIHV 585 (627)
Q Consensus 527 ~~~v~v~VtNtG~~~G~evvQlY~~~p~~--~~~P~k~L~gF-~kv~l~pGes~~V~~~l~~ 585 (627)
.+.|+++|+|..+.. ..|+++++.-.- ...+..+++-= ..+.|+|+|+++|.++|..
T Consensus 487 df~v~v~~~N~s~~~--~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~L~p~~~~~v~~~i~y 546 (695)
T 1g0d_A 487 DFDVIVEVKNEGGRD--AHAQLTMLAMAVTYNSLRRGECQRKTISVTVPAHKAHKEVMRLHY 546 (695)
T ss_dssp CEEEEEEEEECSSSC--EEEEEEEEEEEECTTCBCCCCCCEEEEEEEECTTEEEEEEEEECH
T ss_pred CEEEEEEEEECCCCC--EEEEEEEEEEEEeeCCcccCceeEeeEEEEECCCceEEEEEEECH
Confidence 589999999998876 567777765322 13343333210 1456899999999999986
No 66
>1l4i_A SFAE protein; periplasmic chaperone, immunoglobulin fold; 2.20A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1
Probab=25.76 E-value=90 Score=29.40 Aligned_cols=51 Identities=8% Similarity=0.094 Sum_probs=32.6
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCC-CCcchhhccccccccCCCCeEEEEEE
Q 006889 529 GLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLD 582 (627)
Q Consensus 529 ~v~v~VtNtG~~~G~evvQlY~~~p~~~-~~P~k~L~gF~kv~l~pGes~~V~~~ 582 (627)
.++++|+|+|+- ---.||..+.+.... ..|.--+=-. ..|+||++++|+|.
T Consensus 17 ~~sl~l~N~~~~-~p~LvQsWv~~~~~~~~~pfivtPPl--~rl~p~~~q~lRI~ 68 (206)
T 1l4i_A 17 QVQLAVTNNDDK-SSYLIQSWIENAEGKKDARFVITPPL--FSMQGKKENTLRII 68 (206)
T ss_dssp EEEEEEEECCTT-CEEEEEEEEEETTSCBCSSEEEESSE--EEEESSEEEEEEEE
T ss_pred EEEEEEEeCCCC-ccEEEEEEEecCCCCccCCEEEcCCe--EEECCCCceEEEEE
Confidence 578999999862 257899999763221 1111000001 24899999999997
No 67
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=25.24 E-value=2.6e+02 Score=30.87 Aligned_cols=78 Identities=18% Similarity=0.183 Sum_probs=47.2
Q ss_pred eEEEEEEEEeCCCCCcceEEEEEEeCCCCC---CCcchhhccccccccCCCCeEEEEEEecCCCCceEEeCCCCEEecCe
Q 006889 527 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGN---WSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMG 603 (627)
Q Consensus 527 ~~~v~v~VtNtG~~~G~evvQlY~~~p~~~---~~P~k~L~gF~kv~l~pGes~~V~~~l~~~~~ls~~d~~~~~~~~~G 603 (627)
+.+++-+|||.|..++.-.+. +..|.+. ..|. .|. |. +.||++++++++.. . ..+.|. .|
T Consensus 538 ~~t~~rtvtnvg~~~~ty~~~--v~~p~gv~v~V~P~-~l~-f~----~~~~~~~~~vt~~~-~------~~~~~~--~g 600 (621)
T 3vta_A 538 NQYFNRTLTSVAPQASTYRAM--ISAPQGLTISVNPN-VLS-FN----GLGDRKSFTLTVRG-S------IKGFVV--SA 600 (621)
T ss_dssp EEEEEEEEEECSSSCEEEEEE--EECCSSEEEEEESS-EEE-EC----STTCEEEEEEEEEE-C------CCSSEE--EE
T ss_pred EEEEEEEEEccCCCCeEEEEE--EECCCCcEEEEecC-EEE-Ec----CCCcEEEEEEEEEe-c------CCCceE--EE
Confidence 578888999999876554443 4566552 3444 232 22 67999888888764 2 234443 24
Q ss_pred EEEEEEeCCCceEEEEEEEc
Q 006889 604 EHSLHIGDLKHSISLQANLE 623 (627)
Q Consensus 604 ~y~i~vG~ss~~~~~~~~~~ 623 (627)
..+. .+..|.++.-+.|+
T Consensus 601 ~l~w--~d~~h~Vr~Pi~v~ 618 (621)
T 3vta_A 601 SLVW--SDGVHYVRSPITIT 618 (621)
T ss_dssp EEEE--ECSSCCCEEEEEEE
T ss_pred EEEE--EcCCEEEEeCEEEE
Confidence 4432 35567777766665
No 68
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=24.76 E-value=33 Score=34.94 Aligned_cols=56 Identities=21% Similarity=0.294 Sum_probs=27.8
Q ss_pred HhhcCCEEEEEecCCcccccccCCCCCCCC-C-hhHHHHHHHHHHhcCCCEEEEEecCcceec
Q 006889 333 AARQADATVLVMGLDQSIEAEFIDRAGLLL-P-GRQQELVSRVAKASRGPVVLVLMCGGPVDV 393 (627)
Q Consensus 333 ~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L-~-~~q~~Li~~v~~~~~kpvVVVl~~g~P~~l 393 (627)
..+.||++|++.|... .+|.+|.+|-- . +--.++++++.+.++ ..++++. +||+++
T Consensus 73 a~~~aDiVvi~ag~~~---kpG~tR~dL~~~N~~I~~~i~~~i~~~~p-~a~ilvv-tNPvdi 130 (326)
T 3vku_A 73 DAKDADLVVITAGAPQ---KPGETRLDLVNKNLKILKSIVDPIVDSGF-NGIFLVA-ANPVDI 130 (326)
T ss_dssp GGTTCSEEEECCCCC-------------------CHHHHHHHHHTTTC-CSEEEEC-SSSHHH
T ss_pred HhcCCCEEEECCCCCC---CCCchHHHHHHHHHHHHHHHHHHHHhcCC-ceEEEEc-cCchHH
Confidence 4679999999988543 34556655411 1 112456666666544 3444434 599987
No 69
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=24.54 E-value=72 Score=35.87 Aligned_cols=57 Identities=12% Similarity=-0.053 Sum_probs=42.2
Q ss_pred eEEEEEEEEeCCCCCcceEEEEEEeCCCC--CCCcchhhcccc--ccccCCCCeEEEEEEecC
Q 006889 527 SLGLHVDIKNTGDMAGTHTLLVFAKPPAG--NWSPNKQLIGFK--KVHVTAGALQSVRLDIHV 585 (627)
Q Consensus 527 ~~~v~v~VtNtG~~~G~evvQlY~~~p~~--~~~P~k~L~gF~--kv~l~pGes~~V~~~l~~ 585 (627)
.+.|+++++|..+.. ..|+++++.-.- ...+..++..-. .+.|+|+|+++|.++|..
T Consensus 488 df~v~v~~~N~s~~~--~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~~l~p~~~~~v~~~i~y 548 (687)
T 2q3z_A 488 DFDVFAHITNNTAEE--YVCRLLLCARTVSYNGILGPECGTKYLLNLTLEPFSEKSVPLCILY 548 (687)
T ss_dssp CEEEEEEEEECSSSC--EEEEEEEEEEEECTTCCEEEEEEEEEEEEEEECTTEEEEEEEEECH
T ss_pred CEEEEEEEEECCCCC--EEEEEEEEEEEEeeCCcccceEeeeeeeEEEECCCceEEEEEEECH
Confidence 589999999998876 568888765322 256666662223 356899999999999986
No 70
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=24.53 E-value=96 Score=29.60 Aligned_cols=57 Identities=18% Similarity=0.344 Sum_probs=42.1
Q ss_pred HHHHHHcCCCceEEeccccCCCcccccCHHHHHHHHhhhc--CCCeEEEcChhhhhhhhccccccCChHHHHHHHHHcCC
Q 006889 99 FKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQW--RLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGL 176 (627)
Q Consensus 99 F~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~~LR~e~--gf~G~v~SD~~~~~~~~~~~~~~~~~~~a~~~al~AG~ 176 (627)
+++++++| +.-|++ | +.++.++.-..+... .++|.++.++. ++.| +.+|+++|.
T Consensus 78 a~~ai~AG-A~fivs--------P-~~~~evi~~~~~~~v~~~~~~~~~PG~~-------------TptE-~~~A~~~Ga 133 (217)
T 3lab_A 78 FQKAIDAG-AQFIVS--------P-GLTPELIEKAKQVKLDGQWQGVFLPGVA-------------TASE-VMIAAQAGI 133 (217)
T ss_dssp HHHHHHHT-CSEEEE--------S-SCCHHHHHHHHHHHHHCSCCCEEEEEEC-------------SHHH-HHHHHHTTC
T ss_pred HHHHHHcC-CCEEEe--------C-CCcHHHHHHHHHcCCCccCCCeEeCCCC-------------CHHH-HHHHHHcCC
Confidence 56788888 776665 3 368888877766655 67899999874 3344 577899999
Q ss_pred CcC
Q 006889 177 DLD 179 (627)
Q Consensus 177 D~~ 179 (627)
|++
T Consensus 134 d~v 136 (217)
T 3lab_A 134 TQL 136 (217)
T ss_dssp CEE
T ss_pred CEE
Confidence 986
No 71
>4fxk_B Complement C4-A alpha chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_B*
Probab=24.42 E-value=64 Score=36.77 Aligned_cols=55 Identities=20% Similarity=0.045 Sum_probs=40.5
Q ss_pred eEEEEEEEEeCCCCCcceEEEEEEeCCCCC-CCcchhhccccccccCCCCeEEEEEEecC
Q 006889 527 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIHV 585 (627)
Q Consensus 527 ~~~v~v~VtNtG~~~G~evvQlY~~~p~~~-~~P~k~L~gF~kv~l~pGes~~V~~~l~~ 585 (627)
.+.+.++|.|..+...+-.|+|-..++... ..+.+ -+++.|+||++++|.|.|.+
T Consensus 169 ~~~i~~~V~N~~~~~~~v~v~l~~~~~~~~~~~~~~----~~~~~v~a~~~~~v~f~i~~ 224 (767)
T 4fxk_B 169 QLELRPVLYNYLDKNLTVSVHVSPVEGLCLAGGGGL----AQQVLVPAGSARPVAFSVVP 224 (767)
T ss_dssp EEEECCEEEECSSSCEEEEEEECCCTTEECSSSSCC----CEEEEECSSCEEECCEEEEE
T ss_pred EEEEEEEEEECCCCCEEEEEEEEecCCeEEecCCce----eEEEEEcCCCeEEEEEEEEE
Confidence 799999999999988888888865544321 11111 13567999999999999977
No 72
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=24.37 E-value=42 Score=34.26 Aligned_cols=53 Identities=19% Similarity=0.126 Sum_probs=32.8
Q ss_pred hhcCCEEEEEecCCcccccccCCCCCCCCChhH----HHHHHHHHHhcCCCEEEEEecCcceec
Q 006889 334 ARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQ----QELVSRVAKASRGPVVLVLMCGGPVDV 393 (627)
Q Consensus 334 a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q----~~Li~~v~~~~~kpvVVVl~~g~P~~l 393 (627)
.+.||++|++.|..+ .+|.+|.++ -... .++++++.+.++ ..++++. +||+++
T Consensus 87 ~~daDiVIitaG~p~---kpG~tR~dl--l~~N~~I~k~i~~~I~k~~P-~a~ilvv-tNPvdi 143 (330)
T 3ldh_A 87 SAGSKLVVITAGARQ---QEGESRLNL--VQRNVNIFKFIIPNIVKHSP-DCLKELH-PELGTD 143 (330)
T ss_dssp CSSCSEEEECCSCCC---CSSCCTTGG--GHHHHHHHHHHHHHHHHHCT-TCEEEEC-SSSHHH
T ss_pred hCCCCEEEEeCCCCC---CCCCCHHHH--HHhhHHHHHHHHHHHHhhCC-CceEEeC-CCccHH
Confidence 579999999988653 456666543 2222 345566665543 4554444 599887
No 73
>1rli_A Trp repressor binding protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bacillus subtilis} SCOP: c.23.5.6
Probab=24.15 E-value=1.3e+02 Score=26.86 Aligned_cols=53 Identities=9% Similarity=0.064 Sum_probs=33.1
Q ss_pred chHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhHHHHHHHHHH-------------hcCCCEEEEEecCc
Q 006889 326 LIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK-------------ASRGPVVLVLMCGG 389 (627)
Q Consensus 326 ~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q~~Li~~v~~-------------~~~kpvVVVl~~g~ 389 (627)
.+++..+....||.+|++.-.. ...+|+.-+.+|+.+.. -.+|+++++...|+
T Consensus 61 ~~~~~~~~l~~aD~ii~~~P~y-----------~~~~p~~lK~~iD~~~~~~~~~~~~~~~~~l~~K~~~~i~t~g~ 126 (184)
T 1rli_A 61 DYDSIIERILQCHILIFATPIY-----------WFGMSGTLKLFIDRWSQTLRDPRFPDFKQQMSVKQAYVIAVGGD 126 (184)
T ss_dssp CHHHHHHHHHTCSEEEEEEECB-----------TTBCCHHHHHHHHTHHHHTTCTTSTTHHHHHHTSEEEEEEEESS
T ss_pred CHHHHHHHHHhCCEEEEEeCcc-----------ccCCcHHHHHHHHHhHHhccCccccccccccCCCeEEEEEeCCC
Confidence 3555667788999999875321 23567766777776642 13566666655554
No 74
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=23.33 E-value=1.5e+02 Score=35.96 Aligned_cols=62 Identities=16% Similarity=0.129 Sum_probs=42.2
Q ss_pred eEEEEEEEEeCCCCCcceEEEEEEeCCCCC--CCcchhhccccccccCCCCeEEEEEEecCCCCc
Q 006889 527 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGN--WSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHL 589 (627)
Q Consensus 527 ~~~v~v~VtNtG~~~G~evvQlY~~~p~~~--~~P~k~L~gF~kv~l~pGes~~V~~~l~~~~~l 589 (627)
.+.+.++|.|..+.+++--|+|....+.-. ..+.+....=+++.|++|++++|.|.|.+ ..+
T Consensus 681 ~~~l~~~v~N~~~~~~~v~v~l~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~v~f~i~~-~~~ 744 (1325)
T 2pn5_A 681 AVVLQFTLFNNLGAEYIADVTLYNVANQTEFVGRPNTDLSYTKSVSVPPKVGVPISFLIKA-RKL 744 (1325)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEECGGGCEEETTSCTTCCEEEEEEEECTTCCEEEEEEEEE-CSS
T ss_pred EEEEEEEEEeCCCCcEEEEEEEeecCCceEEeccCCCCCcceEEEEECCCCeEEEEEEEEE-ccc
Confidence 789999999999999888888865432110 11111111113478999999999999987 544
No 75
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=23.26 E-value=21 Score=35.88 Aligned_cols=57 Identities=16% Similarity=0.324 Sum_probs=32.0
Q ss_pred HHhhcCCEEEEEecCCcccccccCCCCCCCCC--hhHHHHHHHHHHhcCCCEEEEEecCcceec
Q 006889 332 VAARQADATVLVMGLDQSIEAEFIDRAGLLLP--GRQQELVSRVAKASRGPVVLVLMCGGPVDV 393 (627)
Q Consensus 332 ~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~--~~q~~Li~~v~~~~~kpvVVVl~~g~P~~l 393 (627)
++.+.||++|++.|... .+|.+|.++-.- +--.++++++.+.++ ..++++. +||+++
T Consensus 65 ~a~~~aDiVViaag~~~---kpG~~R~dl~~~N~~i~~~i~~~i~~~~p-~a~iivv-sNPvd~ 123 (294)
T 1oju_A 65 SLLKGSEIIVVTAGLAR---KPGMTRLDLAHKNAGIIKDIAKKIVENAP-ESKILVV-TNPMDV 123 (294)
T ss_dssp GGGTTCSEEEECCCCCC---CSSCCHHHHHHHHHHHHHHHHHHHHTTST-TCEEEEC-SSSHHH
T ss_pred HHhCCCCEEEECCCCCC---CCCCcHHHHHHHHHHHHHHHHHHHHhhCC-CeEEEEe-CCcchH
Confidence 35679999999988643 344455433100 011344455555443 4555544 599987
No 76
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=23.21 E-value=1.2e+02 Score=27.57 Aligned_cols=53 Identities=13% Similarity=0.198 Sum_probs=34.2
Q ss_pred HHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhHHHHHHHHHH---------------hcCCCEEEEEecCcce
Q 006889 328 GAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK---------------ASRGPVVLVLMCGGPV 391 (627)
Q Consensus 328 ~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q~~Li~~v~~---------------~~~kpvVVVl~~g~P~ 391 (627)
.+..+....||.+|++.=.. ...+|+.-+.+|+.+.. -.+|+++++..+|+++
T Consensus 78 ~~~~~~l~~aD~iv~~~P~y-----------~~~~p~~lK~~iD~~~~~~~~~~~~~~~~~~~l~~K~~~~i~t~g~~~ 145 (201)
T 1t5b_A 78 DELIAELKAHDVIVIAAPMY-----------NFNIPTQLKNYFDLIARAGITFRYTEKGPEGLVTGKRAVVLSSRGGIH 145 (201)
T ss_dssp HHHHHHHHHCSEEEEECCCB-----------TTBCCHHHHHHHHHHCCBTTTEEEETTEEEESSCSCEEEEEEECSSCC
T ss_pred HHHHHHHHhCCEEEEEeCcc-----------cCcCCHHHHHHHHHheeCCCceecCCCCCccCCCCCeEEEEEecCCCC
Confidence 44556778999999865211 34578777888888752 1356666666666553
No 77
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=23.19 E-value=95 Score=28.59 Aligned_cols=37 Identities=19% Similarity=0.179 Sum_probs=26.4
Q ss_pred hHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhHHHHHHHHH
Q 006889 327 IGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVA 374 (627)
Q Consensus 327 ~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q~~Li~~v~ 374 (627)
+.+..+....||.+|++.=.. ...+|+.-+.+|+.+.
T Consensus 85 ~~~~~~~l~~aD~iv~~~P~y-----------~~~~pa~lK~~iD~~~ 121 (208)
T 2hpv_A 85 FNELTDQFLSADKVVIANPMW-----------NLNVPTRLKAWVDTIN 121 (208)
T ss_dssp HHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCEEEEEeccc-----------cCCCCHHHHHHHHHHh
Confidence 455667788999999865211 3467888888888875
No 78
>3szu_A ISPH, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; 3Fe-4S iron-sulfur cluster, conserved cysteine, IPP and DMAP production final STEP; HET: H6P; 1.40A {Escherichia coli} PDB: 3szl_A* 3f7t_A* 3szo_A* 3t0f_A* 3t0g_A* 3urk_A* 3utc_A* 3utd_A* 3uv3_A* 3uv6_A* 3uv7_A* 3uwm_A* 3ke8_A* 3ke9_A* 3kef_A* 3kel_A 3kem_A*
Probab=23.02 E-value=86 Score=31.90 Aligned_cols=78 Identities=14% Similarity=0.145 Sum_probs=42.4
Q ss_pred hHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhHHHHHHHHHHhcCCCEEEEEecCcceecccccCCCCccEE-
Q 006889 327 IGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAI- 405 (627)
Q Consensus 327 ~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q~~Li~~v~~~~~kpvVVVl~~g~P~~l~~~~~~~~v~Ai- 405 (627)
.+++.++|+.+|++||+-|.++ .+-.+|. ++|+..++|+..| -+..=++..|+. .+..|
T Consensus 216 Q~av~~lA~~vD~miVVGg~nS---------------SNT~rL~-eia~~~g~~ty~I-e~~~el~~~wl~---g~~~VG 275 (328)
T 3szu_A 216 QEAVRALAEQAEVVLVVGSKNS---------------SNSNRLA-ELAQRMGKRAFLI-DDAKDIQEEWVK---EVKCVG 275 (328)
T ss_dssp HHHHHHHHHHCSEEEEECCTTC---------------HHHHHHH-HHHHHTTCEEEEE-SSGGGCCHHHHT---TCSEEE
T ss_pred HHHHHHHHHhCCEEEEeCCCCC---------------chHHHHH-HHHHHhCCCEEEe-CChHHCCHHHhC---CCCEEE
Confidence 3556778899999998654332 2334454 5565566676554 333445556764 45555
Q ss_pred EEccCCcch-hHHHHHHHHh
Q 006889 406 LWVGYPGQA-GGAAIADVLF 424 (627)
Q Consensus 406 l~a~~~G~e-~g~AlAdVL~ 424 (627)
|.++-..++ --+.+.+.|.
T Consensus 276 ITAGASTP~~lieeVi~~l~ 295 (328)
T 3szu_A 276 VTAGASAPDILVQNVVARLQ 295 (328)
T ss_dssp EEECTTCCHHHHHHHHHHHH
T ss_pred EeecCCCCHHHHHHHHHHHH
Confidence 444433332 2344444443
No 79
>3zuc_A Cellulosomal scaffoldin; crystalline cellulose-binding protein, sugar binding protein cellulosome; HET: EDO 1PE; 1.00A {Acetivibrio cellulolyticus} SCOP: b.2.2.0 PDB: 3zu8_A* 3zqw_A*
Probab=22.98 E-value=29 Score=31.39 Aligned_cols=35 Identities=11% Similarity=0.026 Sum_probs=28.1
Q ss_pred ccccc--cccCCCCeEEEEEEecCCCCceEEeCCCCEE
Q 006889 564 IGFKK--VHVTAGALQSVRLDIHVCKHLSVVDKFGIRR 599 (627)
Q Consensus 564 ~gF~k--v~l~pGes~~V~~~l~~~~~ls~~d~~~~~~ 599 (627)
.+|.- -.|.||++.+|.|.|.. .+.+-||....|-
T Consensus 89 I~F~~~ag~l~pg~~~eiq~Ri~~-~dws~~dqsnDyS 125 (153)
T 3zuc_A 89 IAFSSAAGTLAANTSIEVQGRFAK-SDWTNYNQADDYS 125 (153)
T ss_dssp EEECGGGCEECTTEEEEEEEEEEE-TTCCCEEGGGCTT
T ss_pred EEeCCCCceECCCCceEEEEEEEc-CCCcccccccCcc
Confidence 35765 46999999999999998 7999999866553
No 80
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=22.23 E-value=1.1e+02 Score=29.09 Aligned_cols=38 Identities=13% Similarity=0.308 Sum_probs=27.0
Q ss_pred hHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhHHHHHHHHHH
Q 006889 327 IGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK 375 (627)
Q Consensus 327 ~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q~~Li~~v~~ 375 (627)
..+..+....||.+|+..=.. ...+|..-+.+|+.+..
T Consensus 85 ~~~l~~~~~~aD~iv~~~P~y-----------~~~~p~~lK~~iD~~~~ 122 (223)
T 3u7i_A 85 MSEILQQFKSANTYVIVLPLH-----------NFNIPSKLKDYMDNIMI 122 (223)
T ss_dssp HHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHHHHCC
T ss_pred HHHHHHHHHhCCEEEEEcChh-----------hccCCHHHHHHHHHHhh
Confidence 345667788999999875321 45678878888888753
No 81
>3ha2_A NADPH-quinone reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics, consortium, NESG; HET: MSE; 1.80A {Pediococcus pentosaceus atcc 25745}
Probab=22.18 E-value=1.4e+02 Score=27.15 Aligned_cols=57 Identities=14% Similarity=0.089 Sum_probs=39.4
Q ss_pred ccchHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhHHHHHHHHHH----------hcCCCEEEEEecCcce
Q 006889 324 NQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK----------ASRGPVVLVLMCGGPV 391 (627)
Q Consensus 324 ~~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q~~Li~~v~~----------~~~kpvVVVl~~g~P~ 391 (627)
..++++..+....||.+|+..=.. .+..|+.-+.+++.+.. -.+|++++++.+|+|-
T Consensus 39 ~~D~~~~~~~l~~aD~iV~~~P~y-----------~~~~pa~lK~~iDrv~~~g~~~~~~~~l~gK~~~~~~t~g~~~ 105 (177)
T 3ha2_A 39 DFNVEQEQSLLLQNDRIILEFPLY-----------WYSAPALLKQWMDTVMTTKFATGHQYALEGKELGIVVSTGDNG 105 (177)
T ss_dssp TCCHHHHHHHHHTCSEEEEEEECB-----------TTBCCHHHHHHHHHHSCHHHHSTTTCTTTTCEEEEEEEESSCG
T ss_pred cccHHHHHHHHHhCCEEEEECChh-----------hccCCHHHHHHHHHHhhcccccCCCcCCCCCEEEEEEeCCCCh
Confidence 345677788899999999865211 34677777778887632 1357787777777775
No 82
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=22.13 E-value=1.4e+02 Score=27.41 Aligned_cols=40 Identities=18% Similarity=0.299 Sum_probs=28.7
Q ss_pred cchHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhHHHHHHHHHH
Q 006889 325 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK 375 (627)
Q Consensus 325 ~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q~~Li~~v~~ 375 (627)
..+.+..+....||.+|++.=.. +...|+.-+.+|+.+..
T Consensus 56 ~~~~~~~~~i~~AD~iV~~sP~y-----------~~~~p~~lK~~iD~~~~ 95 (192)
T 3fvw_A 56 PEVAHAREEVQEADAIWIFSPVY-----------NYAIPGPVKNLLDWLSR 95 (192)
T ss_dssp HHHHHHHHHHHHCSEEEEECCCB-----------TTBCCHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhCCEEEEECccc-----------ccCCCHHHHHHHHHhhc
Confidence 34566778889999999865211 35678888888888763
No 83
>2xg5_A PAPD, chaperone protein PAPD; chaperone, chaperone-surface active protein complex; HET: EC2 EC5; 2.00A {Escherichia coli} PDB: 1pdk_A 2uy6_A 2uy7_A 2j2z_A 2xg4_A* 2w07_A* 3me0_A* 1n0l_A 2wmp_A 3dpa_A 2j7l_A 1qpp_A 1qpx_A
Probab=22.01 E-value=1.6e+02 Score=27.88 Aligned_cols=53 Identities=17% Similarity=0.140 Sum_probs=33.2
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCC---CCcchhhccccccccCCCCeEEEEEEec
Q 006889 529 GLHVDIKNTGDMAGTHTLLVFAKPPAGN---WSPNKQLIGFKKVHVTAGALQSVRLDIH 584 (627)
Q Consensus 529 ~v~v~VtNtG~~~G~evvQlY~~~p~~~---~~P~k~L~gF~kv~l~pGes~~V~~~l~ 584 (627)
.++++|+|+|+. ---.||..+.+.... ..|.--+=-. ..|+||++++|+|...
T Consensus 17 ~~sl~l~N~~~~-~p~LvQsWi~~~~~~~~~~~pfivtPPl--~rl~p~~~q~lRI~~~ 72 (218)
T 2xg5_A 17 SMTLDISNDNKQ-LPYLAQAWIENENQEKIITGPVIATPPV--QRLEPGAKSMVRLSTT 72 (218)
T ss_dssp EEEEEEEECCSS-SCEEEEEEEECTTSCEECSSSEEEECSE--EEECTTCEEEEEEEEC
T ss_pred EEEEEEEcCCCC-CcEEEEEEEecCCCCccccCCEEEcCCe--EEECCCCceEEEEEec
Confidence 578999999954 146899999864321 1111000000 2489999999999654
No 84
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli}
Probab=21.57 E-value=1.7e+02 Score=26.86 Aligned_cols=40 Identities=23% Similarity=0.305 Sum_probs=28.8
Q ss_pred cchHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhHHHHHHHHHH
Q 006889 325 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK 375 (627)
Q Consensus 325 ~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q~~Li~~v~~ 375 (627)
+.+.+..+....||.+|++.=+. +..+|+.-+.+|+.+..
T Consensus 61 ~~~~~l~~~i~~AD~iv~~sP~y-----------~~~~~~~lK~~iD~~~~ 100 (193)
T 3svl_A 61 ATVEALAEQIRQADGVVIVTPEY-----------NYSVPGGLKNAIDWLSR 100 (193)
T ss_dssp HHHHHHHHHHHHSSEEEEEECCB-----------TTBCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCEEEEEeccc-----------CCCCCHHHHHHHHHHhh
Confidence 44566778889999999875221 34678888888888763
No 85
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=21.27 E-value=34 Score=35.63 Aligned_cols=57 Identities=14% Similarity=0.180 Sum_probs=31.3
Q ss_pred HHHhhcCCEEEEEecCCcccccccCCCCCCCCChhHH----HHHHHHHHhcCCCEEEEEecCcceec
Q 006889 331 EVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQ----ELVSRVAKASRGPVVLVLMCGGPVDV 393 (627)
Q Consensus 331 ~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q~----~Li~~v~~~~~kpvVVVl~~g~P~~l 393 (627)
.+..+.||+||++.|..+ .+|.+|.+| -.... ++++++.+......++++. +||+++
T Consensus 103 y~~~~daDvVVitag~pr---kpG~tR~DL--l~~N~~I~k~i~~~i~~~a~p~~ivlVv-sNPvD~ 163 (375)
T 7mdh_A 103 YEVFEDVDWALLIGAKPR---GPGMERAAL--LDINGQIFADQGKALNAVASKNVKVLVV-GNPCNT 163 (375)
T ss_dssp HHHTTTCSEEEECCCCCC---CTTCCHHHH--HHHHHHHHHHHHHHHHHHSCTTCEEEEC-SSSHHH
T ss_pred HHHhCCCCEEEEcCCCCC---CCCCCHHHH--HHHHHHHHHHHHHHHHHhcCCCeEEEEe-cCchhH
Confidence 456789999999877532 345555432 12222 2334454432234554444 699887
No 86
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=21.14 E-value=27 Score=35.43 Aligned_cols=56 Identities=21% Similarity=0.392 Sum_probs=32.3
Q ss_pred HhhcCCEEEEEecCCcccccccCCCCCCCCC--hhHHHHHHHHHHhcCCCEEEEEecCcceec
Q 006889 333 AARQADATVLVMGLDQSIEAEFIDRAGLLLP--GRQQELVSRVAKASRGPVVLVLMCGGPVDV 393 (627)
Q Consensus 333 ~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~--~~q~~Li~~v~~~~~kpvVVVl~~g~P~~l 393 (627)
..+.||++|++.|..+ .+|.+|.++-.- .--.++++++.+.++ ..++++. +||+++
T Consensus 75 a~~~aDvVIiaag~p~---kpg~~R~dl~~~N~~i~~~i~~~i~~~~p-~a~vlvv-sNPvd~ 132 (315)
T 3tl2_A 75 DTADSDVVVITAGIAR---KPGMSRDDLVATNSKIMKSITRDIAKHSP-NAIIVVL-TNPVDA 132 (315)
T ss_dssp GGTTCSEEEECCSCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEEC-CSSHHH
T ss_pred HhCCCCEEEEeCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEC-CChHHH
Confidence 5679999999988653 345555433100 012345566665543 4444434 599887
No 87
>2l8a_A Endoglucanase; carbohydrate-binding module, family 3, hydrolase; NMR {Bacillus subtilis}
Probab=20.89 E-value=26 Score=31.48 Aligned_cols=36 Identities=22% Similarity=0.372 Sum_probs=29.0
Q ss_pred ccccccccCCC-CeEEEEEEecCCCCceEEeCCCCEEe
Q 006889 564 IGFKKVHVTAG-ALQSVRLDIHVCKHLSVVDKFGIRRI 600 (627)
Q Consensus 564 ~gF~kv~l~pG-es~~V~~~l~~~~~ls~~d~~~~~~~ 600 (627)
.+|....|.|| ++.+|.|.|.. .+.+-||....|-.
T Consensus 86 I~f~~g~l~pg~~s~eiq~ri~~-~dws~~dqsNDyS~ 122 (149)
T 2l8a_A 86 LGFKNGTLAPGASTGNIQLRLHN-DDWSNYAQSGDYSF 122 (149)
T ss_dssp EEECCSCSSTTSSSSCEEEEEEC-CTTSCCCTTTTTTT
T ss_pred EEeCCCeECCCCCceEEEEEEEc-CCCCccccCCCccc
Confidence 56877889998 56899999998 78998998766543
No 88
>3gfu_C Chaperone protein FAEE; immunoglobulin like fold, chaperone, fimbrium, immunoglobulin domain, periplasm, plasmid, cell adhesion; 1.99A {Escherichia coli} PDB: 3gew_B 3f65_A 3f6i_A 3f6l_A
Probab=20.70 E-value=2.1e+02 Score=27.28 Aligned_cols=53 Identities=13% Similarity=0.130 Sum_probs=32.6
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCC--CCcchhhccccccccCCCCeEEEEEEec
Q 006889 529 GLHVDIKNTGDMAGTHTLLVFAKPPAGN--WSPNKQLIGFKKVHVTAGALQSVRLDIH 584 (627)
Q Consensus 529 ~v~v~VtNtG~~~G~evvQlY~~~p~~~--~~P~k~L~gF~kv~l~pGes~~V~~~l~ 584 (627)
.++++|+|+|+.. --.||..+.+-... ..|.--.==. ..|+||+.++|+|...
T Consensus 17 ~~sl~l~N~~~~~-p~LvQsWid~~~~~~~~~pfivtPPl--fRlep~~~q~lRIi~~ 71 (224)
T 3gfu_C 17 ALTITVTNNDKER-TFGGQAWVDNIVEKDTRPTFVVTPSF--FKVKPNGQQTLRIIMA 71 (224)
T ss_dssp CEEEEEEECCSSC-CEEEEEEEEESSCCSCSCSEEEESSE--EEECTTCEEEEEEEEC
T ss_pred eEEEEEEeCCCCc-cEEEEEEEecCCCCcccCCEEEcCCe--EEECCCCceEEEEEEC
Confidence 4789999999753 35799999863221 1110000000 2489999999999654
No 89
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=20.67 E-value=1e+02 Score=34.57 Aligned_cols=57 Identities=12% Similarity=-0.002 Sum_probs=40.4
Q ss_pred eEEEEEEEEeCCCCCcceEEEEEEeCCCC--CCCcchhhccc-cccccCCCCeEEEEEEecC
Q 006889 527 SLGLHVDIKNTGDMAGTHTLLVFAKPPAG--NWSPNKQLIGF-KKVHVTAGALQSVRLDIHV 585 (627)
Q Consensus 527 ~~~v~v~VtNtG~~~G~evvQlY~~~p~~--~~~P~k~L~gF-~kv~l~pGes~~V~~~l~~ 585 (627)
.+.++++++|..+.. ..|+++++.-.- ...+..+++-= ..+.|+|+|+++|.++|..
T Consensus 497 df~v~l~~~N~s~~~--~~v~~~l~a~~v~YtG~~~~~~~~~~~~v~L~p~~~~~i~~~i~y 556 (692)
T 1vjj_A 497 EVNLVLLLKNLSRDT--KTVTVNMTAWTIIYNGTLVHEVWKDSATMSLDPEEEAEHPIKISY 556 (692)
T ss_dssp CEEEEEEEEECSSSC--EEEEEEEEEEEECTTCCEEEEEEEEEEEEEECTTCEEEEEEEECH
T ss_pred CEEEEEEEEECCCCC--EEEEEEEEEEEEeeCCccccceEEeeEEEEECCCceEEEEEEECH
Confidence 589999999998865 567887765322 24554444221 2356899999999999986
No 90
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=20.47 E-value=66 Score=27.28 Aligned_cols=77 Identities=18% Similarity=0.115 Sum_probs=40.6
Q ss_pred HHhhcCCEEEEEecCCcccccccCCCCCCCCChhHHHHHHHHHHhcCCCEEEEEecCcceecccccCCCCccEEEEccCC
Q 006889 332 VAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYP 411 (627)
Q Consensus 332 ~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q~~Li~~v~~~~~kpvVVVl~~g~P~~l~~~~~~~~v~Ail~a~~~ 411 (627)
...+.+|++||.+|..... -+..+.++ +. |+..+||+|.|---| .-++|.. ..+...-+..|.
T Consensus 34 ~~I~~~~~vIvL~G~~t~~-----------s~wv~~EI-~~-A~~~gkpIigV~~~g-~~~~P~~--l~~~a~~iV~Wn- 96 (111)
T 1eiw_A 34 ATPEDADAVIVLAGLWGTR-----------RDEILGAV-DL-ARKSSKPIITVRPYG-LENVPPE--LEAVSSEVVGWN- 96 (111)
T ss_dssp CCSSSCSEEEEEGGGTTTS-----------HHHHHHHH-HH-HTTTTCCEEEECCSS-SSCCCTT--HHHHCSEEECSC-
T ss_pred CccccCCEEEEEeCCCcCC-----------ChHHHHHH-HH-HHHcCCCEEEEEcCC-CCcCCHH--HHhhCceeccCC-
Confidence 4467899999999865311 11233343 33 345689988773322 2233321 112222344664
Q ss_pred cchhHHHHHHHHhCCCCC
Q 006889 412 GQAGGAAIADVLFGRANP 429 (627)
Q Consensus 412 G~e~g~AlAdVL~G~~nP 429 (627)
.+.|.|.+-|.++|
T Consensus 97 ----~~~I~~aI~~~~~~ 110 (111)
T 1eiw_A 97 ----PHCIRDALEDALDV 110 (111)
T ss_dssp ----HHHHHHHHHHHHCC
T ss_pred ----HHHHHHHHHhccCC
Confidence 36677777665554
No 91
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=20.45 E-value=97 Score=28.18 Aligned_cols=53 Identities=15% Similarity=0.193 Sum_probs=32.5
Q ss_pred chHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhHHHHHHHHHH-----hcCCCEEEEEecCc
Q 006889 326 LIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK-----ASRGPVVLVLMCGG 389 (627)
Q Consensus 326 ~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L~~~q~~Li~~v~~-----~~~kpvVVVl~~g~ 389 (627)
.+.+..+....||.+|++.-. . ...+|+.-+.+|+.+.. -.+||++++..+|+
T Consensus 62 ~~~~~~~~l~~aD~ii~~sP~---y--------~~~~p~~lK~~iD~~~~~~~~~l~gK~~~~~~t~gg 119 (193)
T 1rtt_A 62 AVERFREQIRAADALLFATPE---Y--------NYSMAGVLKNAIDWASRPPEQPFSGKPAAILGASAG 119 (193)
T ss_dssp HHHHHHHHHHHCSEEEEECCE---E--------TTEECHHHHHHHHHHTCSSSCTTTTCEEEEEEECSS
T ss_pred HHHHHHHHHHhCCEEEEEccc---c--------ccCcCHHHHHHHHHhccccCcccCCCeEEEEEeCCC
Confidence 455666778899999986421 1 23467777788888752 13455555544433
Done!