Query 006890
Match_columns 627
No_of_seqs 407 out of 2916
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 11:39:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006890.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006890hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ctz_A XAA-Pro aminopeptidase 100.0 4E-124 1E-128 1056.9 54.9 593 2-626 7-620 (623)
2 3q6d_A Proline dipeptidase; st 100.0 4E-66 1.4E-70 549.7 28.9 347 166-579 1-353 (356)
3 4ege_A Dipeptidase PEPE; struc 100.0 1.1E-65 3.7E-70 548.9 27.0 369 155-583 2-377 (378)
4 2zsg_A Aminopeptidase P, putat 100.0 2.5E-63 8.5E-68 529.1 30.5 342 170-579 2-356 (359)
5 4fkc_A XAA-Pro aminopeptidase; 100.0 9.7E-64 3.3E-68 535.4 27.2 361 160-579 7-374 (377)
6 1wn1_A Dipeptidase; prolidase, 100.0 3.4E-63 1.2E-67 526.3 25.1 344 171-580 2-354 (356)
7 1wy2_A XAA-Pro dipeptidase; st 100.0 2E-62 7E-67 519.4 27.2 337 169-578 5-349 (351)
8 3biq_A FACT complex subunit SP 100.0 1.3E-60 4.4E-65 525.2 29.1 373 161-591 6-454 (467)
9 1kp0_A Creatine amidinohydrola 100.0 7.2E-60 2.5E-64 509.9 27.5 360 162-581 18-397 (402)
10 1chm_A Creatine amidinohydrola 100.0 1.7E-58 5.8E-63 498.4 29.5 362 159-581 14-397 (401)
11 3cb6_A FACT complex subunit SP 100.0 1.6E-58 5.5E-63 505.6 28.0 368 161-586 6-441 (444)
12 4b28_A Metallopeptidase, famil 100.0 7E-59 2.4E-63 506.7 19.4 369 164-584 75-469 (470)
13 2v3z_A XAA-Pro aminopeptidase; 100.0 6.7E-58 2.3E-62 498.5 26.9 354 164-584 4-432 (440)
14 3ig4_A XAA-Pro aminopeptidase; 100.0 5.7E-56 2E-60 478.6 27.0 363 166-596 4-421 (427)
15 2iw2_A XAA-Pro dipeptidase; me 100.0 1.3E-52 4.5E-57 462.4 23.8 360 162-586 18-480 (494)
16 3rva_A Organophosphorus acid a 100.0 9.5E-52 3.3E-56 448.3 25.0 351 169-577 13-441 (451)
17 3l24_A XAA-Pro dipeptidase; PI 100.0 4.8E-50 1.6E-54 438.4 25.5 351 169-578 13-440 (517)
18 3tav_A Methionine aminopeptida 100.0 1.6E-48 5.3E-53 401.1 22.5 234 298-576 20-286 (286)
19 3tb5_A Methionine aminopeptida 100.0 1.8E-48 6.3E-53 396.6 22.4 231 307-583 1-256 (264)
20 3mx6_A Methionine aminopeptida 100.0 2.5E-48 8.7E-53 394.9 21.9 228 306-580 4-258 (262)
21 3pka_A Methionine aminopeptida 100.0 8.4E-48 2.9E-52 395.2 23.0 219 306-557 37-279 (285)
22 3s6b_A Methionine aminopeptida 100.0 3.3E-47 1.1E-51 398.8 21.4 232 306-582 99-358 (368)
23 2gg2_A Methionine aminopeptida 100.0 4E-47 1.4E-51 386.5 21.4 228 307-579 1-254 (263)
24 1o0x_A Methionine aminopeptida 100.0 4.7E-47 1.6E-51 385.5 20.9 220 305-557 11-255 (262)
25 2b3h_A Methionine aminopeptida 100.0 2.7E-46 9.2E-51 389.6 22.5 229 306-579 71-325 (329)
26 1qxy_A Methionyl aminopeptidas 100.0 7.9E-46 2.7E-50 374.7 21.1 222 310-578 3-251 (252)
27 4fuk_A Methionine aminopeptida 100.0 9.7E-46 3.3E-50 388.4 21.7 235 298-577 51-309 (337)
28 2q8k_A Proliferation-associate 100.0 1.2E-39 4.2E-44 348.2 22.7 249 303-596 12-366 (401)
29 1xgs_A Methionine aminopeptida 100.0 6.7E-37 2.3E-41 314.9 18.9 200 314-550 1-203 (295)
30 1b6a_A Methionine aminopeptida 100.0 7.6E-36 2.6E-40 321.6 18.3 207 306-549 154-378 (478)
31 2nw5_A Methionine aminopeptida 100.0 1E-35 3.5E-40 312.3 15.1 200 310-545 41-256 (360)
32 3fm3_A Methionine aminopeptida 100.0 3.4E-30 1.2E-34 271.5 17.6 201 303-537 32-247 (358)
33 3qoc_A Putative metallopeptida 99.9 3.9E-24 1.3E-28 194.5 9.3 124 2-145 11-135 (135)
34 3il0_A Aminopeptidase P; XAA-P 99.9 2.8E-23 9.4E-28 187.8 9.9 126 1-148 4-131 (131)
35 3ovk_A Aminopeptidase P, XAA-P 99.9 2.1E-22 7.1E-27 182.4 9.2 122 2-145 9-132 (132)
36 3q6d_A Proline dipeptidase; st 99.9 4.2E-22 1.4E-26 211.0 11.4 321 1-445 3-339 (356)
37 3pn9_A Proline dipeptidase; st 99.8 6.3E-21 2.2E-25 173.9 10.1 128 2-148 4-138 (138)
38 3i7m_A XAA-Pro dipeptidase; st 99.8 4.6E-21 1.6E-25 175.4 7.6 127 2-146 3-139 (140)
39 3ooo_A Proline dipeptidase; st 99.8 2.5E-20 8.7E-25 168.6 10.8 124 2-145 2-132 (132)
40 3o5v_A X-Pro dipeptidase; crea 99.8 3.2E-20 1.1E-24 168.0 9.5 124 2-145 2-132 (132)
41 2zsg_A Aminopeptidase P, putat 99.8 1.5E-19 5.1E-24 191.6 10.1 318 3-444 2-341 (359)
42 3biq_A FACT complex subunit SP 99.8 4E-19 1.4E-23 194.9 10.3 343 2-445 14-425 (467)
43 4ege_A Dipeptidase PEPE; struc 99.7 4.6E-18 1.6E-22 181.0 10.0 322 2-445 16-359 (378)
44 1kp0_A Creatine amidinohydrola 99.7 3.2E-18 1.1E-22 184.1 6.6 133 2-152 25-162 (402)
45 4fkc_A XAA-Pro aminopeptidase; 99.7 1.6E-16 5.4E-21 169.4 12.6 324 1-444 15-359 (377)
46 1wy2_A XAA-Pro dipeptidase; st 99.7 7.2E-17 2.5E-21 170.2 8.5 316 1-444 4-335 (351)
47 1wn1_A Dipeptidase; prolidase, 99.6 2E-15 7E-20 159.4 8.0 315 3-445 1-339 (356)
48 3cb6_A FACT complex subunit SP 99.5 4.4E-14 1.5E-18 153.8 12.5 147 2-152 14-182 (444)
49 4b28_A Metallopeptidase, famil 99.5 1.5E-14 5.1E-19 157.4 5.0 130 2-152 80-234 (470)
50 4b6a_t Probable metalloproteas 99.5 7.1E-13 2.4E-17 143.8 15.9 184 302-506 32-272 (614)
51 3il0_A Aminopeptidase P; XAA-P 99.4 1.1E-13 3.8E-18 124.5 8.0 124 168-311 4-131 (131)
52 3pn9_A Proline dipeptidase; st 99.4 3.7E-14 1.3E-18 128.8 4.6 130 169-311 4-138 (138)
53 1chm_A Creatine amidinohydrola 99.4 3.4E-14 1.2E-18 152.6 2.9 133 2-152 24-162 (401)
54 3qoc_A Putative metallopeptida 99.2 7.2E-12 2.4E-16 113.3 6.9 125 163-308 5-135 (135)
55 3ovk_A Aminopeptidase P, XAA-P 99.2 2.6E-11 9E-16 109.1 9.4 121 168-308 8-132 (132)
56 2v3z_A XAA-Pro aminopeptidase; 99.2 2.5E-11 8.4E-16 131.7 8.1 336 2-445 9-412 (440)
57 3ig4_A XAA-Pro aminopeptidase; 99.2 4.1E-11 1.4E-15 128.9 8.6 333 2-445 7-390 (427)
58 3o5v_A X-Pro dipeptidase; crea 99.1 3.5E-11 1.2E-15 108.3 6.0 126 170-308 3-132 (132)
59 3ooo_A Proline dipeptidase; st 99.1 4.9E-11 1.7E-15 107.3 6.1 126 170-308 3-132 (132)
60 3ctz_A XAA-Pro aminopeptidase 99.1 2.6E-11 9E-16 136.7 3.6 127 2-152 179-326 (623)
61 3i7m_A XAA-Pro dipeptidase; st 99.0 2.4E-10 8.2E-15 103.8 5.3 130 170-309 4-139 (140)
62 2iw2_A XAA-Pro dipeptidase; me 98.0 1.3E-06 4.3E-11 95.9 0.8 69 2-70 25-102 (494)
63 3rva_A Organophosphorus acid a 97.5 1.1E-05 3.8E-10 87.1 -0.4 137 3-152 14-164 (451)
64 3l24_A XAA-Pro dipeptidase; PI 97.3 2.7E-05 9.3E-10 85.1 -1.1 137 3-152 14-164 (517)
65 3fm3_A Methionine aminopeptida 94.5 0.081 2.8E-06 55.0 8.4 89 450-543 47-140 (358)
66 4fuk_A Methionine aminopeptida 92.4 0.36 1.2E-05 49.7 8.9 93 450-552 71-171 (337)
67 3tb5_A Methionine aminopeptida 91.2 0.87 3E-05 44.9 10.0 95 451-552 13-112 (264)
68 2b3h_A Methionine aminopeptida 88.6 2.3 7.8E-05 43.4 10.8 95 451-552 84-183 (329)
69 1xgs_A Methionine aminopeptida 88.2 1.2 4.1E-05 44.8 8.3 95 450-553 5-101 (295)
70 3s6b_A Methionine aminopeptida 87.8 2.5 8.6E-05 43.8 10.5 96 451-553 112-212 (368)
71 3mx6_A Methionine aminopeptida 87.2 3.4 0.00012 40.5 10.8 96 451-552 17-116 (262)
72 3pka_A Methionine aminopeptida 86.8 3.6 0.00012 40.9 10.8 96 451-552 50-149 (285)
73 1qxy_A Methionyl aminopeptidas 84.7 4.5 0.00015 39.3 10.2 92 451-552 12-111 (252)
74 2nw5_A Methionine aminopeptida 84.4 3.6 0.00012 42.5 9.6 94 451-552 50-150 (360)
75 2gg2_A Methionine aminopeptida 84.0 5.1 0.00017 39.2 10.3 95 451-552 13-114 (263)
76 1o0x_A Methionine aminopeptida 82.6 6.9 0.00024 38.2 10.6 95 451-552 25-125 (262)
77 3tav_A Methionine aminopeptida 82.5 7.5 0.00026 38.6 11.0 95 451-552 43-143 (286)
78 2q8k_A Proliferation-associate 82.4 1.5 5.2E-05 46.1 5.9 99 451-553 28-135 (401)
79 1b6a_A Methionine aminopeptida 74.3 4.1 0.00014 43.7 6.3 92 452-552 170-269 (478)
80 4b6a_t Probable metalloproteas 59.0 21 0.00073 39.0 8.0 101 451-555 49-184 (614)
81 4ard_A Capsid protein P27; vir 34.2 9.1 0.00031 32.4 0.2 37 567-605 30-67 (116)
82 2ki0_A DS119; beta-alpha-beta, 20.4 49 0.0017 20.6 1.6 24 438-461 4-27 (36)
No 1
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens}
Probab=100.00 E-value=3.8e-124 Score=1056.95 Aligned_cols=593 Identities=44% Similarity=0.818 Sum_probs=544.6
Q ss_pred HHHHHHHHHHHhcCCCC-----ceEEEEcCCCCcCccCcCccccccccccccccCceEEEEeCCceEEEEcchhHHHHhc
Q 006890 2 AEILAALRSLMSSHDPP-----LHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMNEALLWTDGRYFLQATQ 76 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~-----~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs~g~~vvt~~~a~l~tD~RY~~qA~~ 76 (627)
.+||++||++|+++ + +||||||+.|+|||||||++++|++||||||||+|++|||.++++|||||||++||++
T Consensus 7 ~~Rl~~LR~~m~~~--~~~~~~lda~lv~~~D~h~sey~~~~~~~~~ylsGFtGSaG~~vVt~~~a~l~tDgRY~~QA~~ 84 (623)
T 3ctz_A 7 SELLRQLRQAMRNS--EYVTEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSAGTAIITEEHAAMWTDGRYFLQAAK 84 (623)
T ss_dssp HHHHHHHHHHTTCT--TTCSSCCSEEEECSCCTTCCSSCCGGGCHHHHHHSCCSSCCEEEEESSCEEEEECGGGHHHHHH
T ss_pred HHHHHHHHHHHHhc--CCCCCceeEEEECCCCccccccccchhccceeccCcCCCceEEEEecCeeEEEECcHHHHHHHH
Confidence 57999999999986 5 9999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcEEEEEcCC--CCCHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhhcCCCCCCC
Q 006890 77 ELTGEWKLMRMLE--DPAVDVWMANNLPNDAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNRPPVETY 154 (627)
Q Consensus 77 ~~~~~~~~~~~~~--~~~~~~~l~~~l~~~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~~k~~~e~~ 154 (627)
|++.+|++++.+. .+.+.+||.+++..+++||||++++|++.+++|++.++..+++++++..|+||.+|.+||..+.+
T Consensus 85 ql~~~~~l~~~~~~~~~~~~~~l~~~l~~~~~vG~d~~~~s~~~~~~l~~~l~~~~~~lv~~~~~lvd~iw~~Rp~k~~~ 164 (623)
T 3ctz_A 85 QMDSNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVDPLIIPTDYWKKMAKVLRSAGHHLIPVKENLVDKIWTDRPERPCK 164 (623)
T ss_dssp HBCTTEEEEETTSTTCCCHHHHHHHHCCTTCEEEECGGGSBHHHHHHHHHHHHHTTCEEEECSSCHHHHHCTTCCCCCCC
T ss_pred hcCCceEEEEecCCCCccHHHHHHHhCcCCCEEEECcccccHHHHHHHHHHHHhcCCEEEecCCCcHHHHhhcCCCCCch
Confidence 9976799998774 47788999999998999999999999999999999998777899998569999999999999999
Q ss_pred ccccccccccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECCceEEEEeCCCCCH
Q 006890 155 PVTVQQIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSS 234 (627)
Q Consensus 155 ~i~~~~~~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~v~~~~~~~ 234 (627)
+++.++.+|+|+++.+|++++|+.|+++++|++++++++|++||+|++|+|++|+|+|++|++|+.++++||++..++..
T Consensus 165 e~~~~~~~~ag~~~~~rl~~lr~~m~e~~~dallit~~~~i~yl~~~~G~dv~~~pi~~~~llv~~~~~~l~v~~~~~~~ 244 (623)
T 3ctz_A 165 PLLTLGLDYTGISWKDKVADLRLKMAERNVMWFVVTALDEIAWLFNLRGSDVEHNPVFFSYAIIGLETIMLFIDGDRIDA 244 (623)
T ss_dssp CCEECCHHHHSSCHHHHHHHHHHHHHTTTEEEEEECCHHHHHHHHTEECCSSSSSCCCSCEEEEESSCEEEECCSGGGGS
T ss_pred hhhhcchhhcChhHHHHHHHHHHHHHHcCCCEEEECCHHHHHHHhCCCCccCCCCcceeEEEEEecCCcEEEEechhcCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999889999999877654
Q ss_pred -HHHHhhh-------hCCeEEeeCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcCCC-eEEecCCccc
Q 006890 235 -EVISFLK-------ESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNSD-KVLLQQSPLA 305 (627)
Q Consensus 235 -~~~~~l~-------~~~v~v~~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~~~-~~~~~~~~i~ 305 (627)
.+++++. ..++++.+|.++.+.+..+... . ...++|++|.. .++.+++.|+.. ++++..+++.
T Consensus 245 ~~~~~~l~~~~~~p~~~~v~v~~y~~~~~~l~~l~~~-~------~~~~~i~id~~-~~~~l~~~l~~~~~~v~~~~~i~ 316 (623)
T 3ctz_A 245 PSVKEHLLLDLGLEAEYRIQVHPYKSILSELKALCAD-L------SPREKVWVSDK-ASYAVSETIPKDHRCCMPYTPIC 316 (623)
T ss_dssp HHHHHHTTTTSCCCGGGCEEEECGGGHHHHHHHHHHT-C------CTTCEEEEETT-SBHHHHHHSCGGGEEEESSCHHH
T ss_pred HHHHHHHhhccccccCCceEEEEhHHHHHHHHHHHhc-c------cCCeEEEECch-hhHHHHHhccccceEEecccHHH
Confidence 5666663 3568999999988877766421 0 02468999987 568999999765 6889999999
Q ss_pred hhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhc
Q 006890 306 LAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKE 385 (627)
Q Consensus 306 ~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~ 385 (627)
.+|+|||+.||++||+|+++++.|+.++++|+++.+ . ++|+||.++++.++.++....
T Consensus 317 ~~R~iK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i-~---------------------~~g~tE~el~~~l~~~~~~~~ 374 (623)
T 3ctz_A 317 IAKAVKNSAESEGMRRAHIKDAVALCELFNWLEKEV-P---------------------KGGVTEISAADKAEEFRRQQA 374 (623)
T ss_dssp HHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHG-G---------------------GTCCBHHHHHHHHHHHHHTST
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-C---------------------CCCCcHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999987654 1 579999999999998876556
Q ss_pred CCCCCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHH
Q 006890 386 HFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIAL 465 (627)
Q Consensus 386 g~~~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~ 465 (627)
|+.+.+|+||+++|+|++++||.|+.+++++|++||+|++|+|++|.||++|+||||++|+||++|+++|+.|+++++++
T Consensus 375 g~~~~sf~~iv~~G~n~a~~H~~~~~~~~~~l~~gd~vliD~G~~y~gy~sDiTRT~~vG~~s~~~~~~y~~vl~a~~~~ 454 (623)
T 3ctz_A 375 DFVDLSFPTISSTGPTGAIIHYAPVPETNRTLSLDEVYLIDSGAQYKDGTTDVTRTMHFETPTAYEKECFTYVLKGHIAV 454 (623)
T ss_dssp TEEEESSCCEEEEGGGGGCTTCCCCGGGCCBCCTTSCEEEEECEEETTEECCEEEEECSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCcCCCCCceeeecCccccccCCCCCCCCcccCCCCEEEEEEeEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 77789999999999999999999986667999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCcccchHHHHHHHHHHHcCCCCcccccccccccCccccCCCcCCCC-CCCCcccCCcEEeeCceeeecCccEE
Q 006890 466 GNAVFPNGTCGHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISFK-PRNVPIHASMTATDEPGYYEDGNFGI 544 (627)
Q Consensus 466 ~~~~~p~G~~~~~l~~~a~~~l~~~G~~~~h~~GHgvG~~l~vhE~P~~~~~~-~~~~~l~~Gmv~siEPg~y~~~~~Gv 544 (627)
++++||.|+++.+||.++|+++|+.|++|.|++|||||+||++||+|..++.. .++.+|+||||||+|||+|.+|.+||
T Consensus 455 ~~~~~p~G~~~~~id~~ar~~l~~~G~~~~h~~GHgvG~~l~vHE~P~~i~~~~~~~~~L~~GMv~tiEPGiy~~g~~Gi 534 (623)
T 3ctz_A 455 SAAVFPTGTKGHLLDSFARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGI 534 (623)
T ss_dssp HTCCEETTCBGGGGGGGGTHHHHHTTCCCSSCSEEBCCSSSCSSCCSCEECTTCSCSCBCCTTCEEEECCEEEETTTEEE
T ss_pred HHHhCcCCCcHHHHHHHHHHHHHHhCCCCCCCccccCCCCCCCCCCCccCCCCCCCCCccCCCeEEEEeCcEEECCceEE
Confidence 99999779999999999999999999999999999999999999999855542 15678999999999999999999999
Q ss_pred EEeEeeEEecCCcccccCCcceeeeecccccccccccccccCCCHHHHHHHHHHHHHHHHHHCCCCcH----HHHHHHHH
Q 006890 545 RLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMINLKSLTPEEIDWLNAYHSKCRDILAPYLDE----AELAWLKK 620 (627)
Q Consensus 545 riEd~v~V~~~g~~~~~~~~~~~~fe~lT~~p~~~~~i~~~~l~~~e~~~ln~y~~~~~~~~~~~l~~----~~~~wl~~ 620 (627)
||||+|+||+++...+|++++||+||+||.+|+++++|+.+|||++|++|||+||++|+++|+|+|++ ++++||++
T Consensus 535 RiEd~vlVt~~~~~~~~~~~~~lg~e~LT~~P~~~~~i~~~ll~~~e~~wln~yh~~v~~~~~p~l~~~~~~~~~~wl~~ 614 (623)
T 3ctz_A 535 RIENVVLVVPVKTKYNFNNRGSLTLEPLTLVPIQTKMIDVDSLTDKECDWLNNYHLTCRDVIGKELQKQGRQEALEWLIR 614 (623)
T ss_dssp ECBEEEEEEEECCSSCCSSSCEEEEEECCCCCCCGGGSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred EEeeEEEEecCCcccccccccccCCceeeeCCccHHHHHHHhCCHHHHHHHHHHHHHHHHHHhHhhCCCCcHHHHHHHHH
Confidence 99999999998766788889999999999999999999999999999999999999999999999985 67999999
Q ss_pred ccccCC
Q 006890 621 ATEPAS 626 (627)
Q Consensus 621 ~~~~~~ 626 (627)
+|+||+
T Consensus 615 ~t~~~~ 620 (623)
T 3ctz_A 615 ETQPIS 620 (623)
T ss_dssp TTCCC-
T ss_pred HhHhhc
Confidence 999985
No 2
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}
Probab=100.00 E-value=4e-66 Score=549.71 Aligned_cols=347 Identities=27% Similarity=0.398 Sum_probs=305.6
Q ss_pred CcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECCceEEEEeCCCCCHHHHHhhhhCCe
Q 006890 166 SSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFLKESGV 245 (627)
Q Consensus 166 ~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~v~~~~~~~~~~~~l~~~~v 245 (627)
+++.+|++++|+.|+++++|++++++++|++||||++|++ ++++|+.+++.|+++.+...+. +..+ .++
T Consensus 1 ~~~~~Rl~~lr~~m~~~giDa~lI~~~~ni~YLtGf~g~~--------~~llvt~~~~~l~~d~r~~~~a-~~~~--~~~ 69 (356)
T 3q6d_A 1 SNAMEKIERLRSAFDEAGIDGILLTNEHSRRYMANFTGTA--------GVVLISKKRAQFITDFRYVEQA-SKQA--VGY 69 (356)
T ss_dssp -CHHHHHHHHHTTHHHHTCSEEEECCHHHHHHHHCCCSSS--------CEEEEESSCEEEEECGGGHHHH-HHHS--TTS
T ss_pred CcHHHHHHHHHHHHHHcCCCEEEECChhhceEccCCCCCC--------eEEEEECCCeEEEEChhhHHHH-HhhC--CCC
Confidence 3688999999999999999999999999999999999876 7899999999999988765443 3322 357
Q ss_pred EEeeC-CchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcCCC---eEEecCCccchhhhcCCHHHHHHHHH
Q 006890 246 EVRDY-DAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNSD---KVLLQQSPLALAKAIKNPVELDGLKK 321 (627)
Q Consensus 246 ~v~~y-~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~~~---~~~~~~~~i~~~r~iK~~~Ei~~~r~ 321 (627)
++..| .+..+.+..+... .+.++|++|...+++..++.|.+. ++++.++++..+|++||++||+.||+
T Consensus 70 ~v~~~~~~~~~~l~~~l~~--------~~~~~igve~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~iK~~~Ei~~~r~ 141 (356)
T 3q6d_A 70 EIVQHAGLIIDEVAKQVKE--------LGIQKLGFEQDTLTYSSYSAHKEAIDAEFIPTSGLVEKLRLIKTDSEIKILKE 141 (356)
T ss_dssp EEEECSSCHHHHHHHHHHH--------HTCSEEEEETTTSBHHHHHHHHHHCCSEEEEECSHHHHHHTSCCHHHHHHHHH
T ss_pred EEEEeCCCHHHHHHHHHHh--------cCCceEEEcCccCCHHHHHHHhhhcccceecchhhhhhhccCCCHHHHHHHHH
Confidence 77776 3344444444321 135789999988999888876542 78999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCCCcCCcccccCCC
Q 006890 322 AHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPN 401 (627)
Q Consensus 322 A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~f~~i~~~G~n 401 (627)
|+++++.++..+++++ ++|+||.|+++.++.++. ..|+.+.+|++|+++|+|
T Consensus 142 A~~i~~~~~~~~~~~i---------------------------~~G~te~e~~~~~~~~~~-~~g~~~~~f~~iv~~g~n 193 (356)
T 3q6d_A 142 AAQIADAAFEHILSFI---------------------------RPGVSEIEVSNELEFFMR-KQGATSSSFDIIVASGLR 193 (356)
T ss_dssp HHHHHHHHHHHHTTTC---------------------------CTTCBHHHHHHHHHHHHH-HTTCSEESSCCEEEEGGG
T ss_pred HHHHHHHHHHHHHHHc---------------------------cCCCCHHHHHHHHHHHHH-HCCCCcCCCCCEEEEcCc
Confidence 9999999988776653 799999999999998774 567788899999999999
Q ss_pred cccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhccCCCCcccchHHH
Q 006890 402 AAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDI 481 (627)
Q Consensus 402 ~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~ 481 (627)
++++||.|++ ++|++||+|++|+|++|+||++|+||||++|+|+++|+++|+.+++++.+++++++| |+++++|+.
T Consensus 194 ~~~~H~~~~~---~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~p-G~~~~~i~~ 269 (356)
T 3q6d_A 194 SALPHGVASE---KVIETGDFVTLDFGAYYKGYCSDITRTIAVGEPSDKLKEIYNIVLEAQLRGVNGIKA-GLTGREADA 269 (356)
T ss_dssp GGCTTCBCCS---CBCCTTCEEEEEECEEETTEECCEEEEEESSCCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHH
T ss_pred cccCCCCCCC---cccCCCCEEEEEEeEEECCEEeeeEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHH
Confidence 9999999975 899999999999999999999999999999999999999999999999999999997 999999999
Q ss_pred HHHHHHHHcCC--CCcccccccccccCccccCCCcCCCCCCCCcccCCcEEeeCceeeecCccEEEEeEeeEEecCCccc
Q 006890 482 LARLPLWKYGL--DYRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYYEDGNFGIRLENVLVVTDANTKF 559 (627)
Q Consensus 482 ~a~~~l~~~G~--~~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~Gmv~siEPg~y~~~~~GvriEd~v~V~~~g~~~ 559 (627)
++++++++.|+ +|.|++||||| |++||+|.+ +.+ ++.+|+||||||+|||+|.+|.+||||||+|+||++|+
T Consensus 270 ~~~~~~~~~g~~~~~~h~~GHgiG--l~~he~p~i-~~~-~~~~l~~Gmv~tiEPgiy~~g~~gvriEd~v~vt~~G~-- 343 (356)
T 3q6d_A 270 LTRDYITEKGYGEYFGHSTGHGIG--LEIHEAPGL-AFR-SDTVLEPGMAVTVEPGIYIPGIGGVRIEDDIIVTSEGN-- 343 (356)
T ss_dssp HHHHHHHHTTCGGGCCSCSEEECS--SSSSEEEEE-STT-CCCBCCTTCEEEECCEEEETTTEEEECBEEEEECSSSE--
T ss_pred HHHHHHHHcCCcccCCCCCcccCC--CCcCcCCCC-CCC-CCCCcCCCCEEEECCEEEECCCCeEEEccEEEEeCCcc--
Confidence 99999999999 68999999999 999999975 333 67899999999999999999999999999999999997
Q ss_pred ccCCcceeeeeccccccccc
Q 006890 560 NFGDKGYLSFEHITWAPYQI 579 (627)
Q Consensus 560 ~~~~~~~~~fe~lT~~p~~~ 579 (627)
|.||..|.++
T Consensus 344 ----------e~Lt~~p~~l 353 (356)
T 3q6d_A 344 ----------EVITKSPKEL 353 (356)
T ss_dssp ----------EECCCSCCSC
T ss_pred ----------eeCCCCCcce
Confidence 9999988764
No 3
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans}
Probab=100.00 E-value=1.1e-65 Score=548.94 Aligned_cols=369 Identities=24% Similarity=0.320 Sum_probs=312.4
Q ss_pred ccccccccccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECC-ceEEEEeCCCCC
Q 006890 155 PVTVQQIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTN-AAFLYVDKRKVS 233 (627)
Q Consensus 155 ~i~~~~~~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~-~~~L~v~~~~~~ 233 (627)
|++.++..|++.++.+|++++|+.|+++++|++++++++|++||||+++.+.. . .++++|+.+ +++|+++..+..
T Consensus 2 ~~~~~~~~~~~~e~~~R~~~l~~~m~~~g~da~li~~~~ni~YltG~~~~~~~-r---~~~l~v~~~g~~~l~~~~~~~~ 77 (378)
T 4ege_A 2 PGSMDSGRFDTAVYARRLAAAAAATEQAGLAGLVITPGYDLRYLIGSRADTFE-R---LTALVLPASGVPTIVLPRLELA 77 (378)
T ss_dssp ------CCCCHHHHHHHHHHHHHHHHHTTCSEEEECSSHHHHHHHCCCCCCSS-S---CCEEEEESSSCCEEEEEGGGGG
T ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHHcCCCEEEECCcchhHHhhCCCCCCCc-c---eEEEEEEeCCcEEEEEChhhHH
Confidence 78899999999999999999999999999999999999999999999986521 1 267888754 789999876654
Q ss_pred HHHHHhhhhCCeEEeeCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcC---CCeEEecCCccchhhhc
Q 006890 234 SEVISFLKESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLN---SDKVLLQQSPLALAKAI 310 (627)
Q Consensus 234 ~~~~~~l~~~~v~v~~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~---~~~~~~~~~~i~~~r~i 310 (627)
...++.+...++++.+|.+..+++..++. .+. ...++|++| ..+++..+..|. ..++++.++++..+|++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~l~-----~~~~~igve-~~~~~~~~~~l~~~~~~~~~~~~~~i~~~R~i 150 (378)
T 4ege_A 78 SLKESAASDLGVCVRDWVDGDDPYQLVAV-ALG-----GAPAATAVT-DSMPALHLLPLADALGVLPVLATDVLRQLRMV 150 (378)
T ss_dssp GGGTSSTTTTTCEEEEECTTSCHHHHHHH-HTT-----SSSCCEEEC-TTCCHHHHHHHHHHHTSCCEESHHHHHHHHTB
T ss_pred HHHhcccCCCCeEEEEecCCCCHHHHHHH-HHh-----cCCCEEEEc-CCCcHHHHHHHHHHcCCeEEEcHHHHHHHHHc
Confidence 33222222346788888664444433332 221 123589999 568887766654 45889999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCCC
Q 006890 311 KNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGL 390 (627)
Q Consensus 311 K~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~ 390 (627)
||++||+.||+|+++++.++..+++++ ++|+||.|+++.++.++. ..|..+.
T Consensus 151 Ks~~Ei~~~r~A~~i~~~a~~~~~~~i---------------------------~~G~tE~el~~~~~~~~~-~~G~~~~ 202 (378)
T 4ege_A 151 KEAAEVDALAKAGAAIDRVHARVPAFL---------------------------VPGRTEAQVAADIAEAIV-AEGHSAV 202 (378)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------CTTCBHHHHHHHHHHHHH-HTTCSEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhc---------------------------cCCCCHHHHHHHHHHHHH-HcCCCCC
Confidence 999999999999999999999888775 789999999999999874 4566777
Q ss_pred cCCcccccCCCcccccccCCCCccCCCCCCCeEEEeeccee-cCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhcc
Q 006890 391 SFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQY-QDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAV 469 (627)
Q Consensus 391 ~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y-~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~ 469 (627)
+| +|+++|+|++.+||.|++ ++|++||+|++|+|++| +||++|+||||++|+|+++++++|+.+++++.++++++
T Consensus 203 ~f-~iv~sG~n~~~~H~~~~~---~~l~~Gd~v~iD~G~~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~ 278 (378)
T 4ege_A 203 AF-VIVGSGPHGADPHHGYSD---RKLQVGDIVVVDIGGTYEPGYYSDSTRTYSIGDPSPDVAQQYSALQRAQRAAVDAV 278 (378)
T ss_dssp EE-EEEEEGGGGGCTTCCCCS---CBCCTTCEEEEEEEEEETTTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred Ce-eEEEeeCCCCccCCCCCC---CCcCCCCEEEEEEEEEECCeEEEccEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 89 999999999999999975 89999999999999999 99999999999999999999999999999999999999
Q ss_pred CCCCcccchHHHHHHHHHHHcCC--CCcccccccccccCccccCCCcCCCCCCCCcccCCcEEeeCceeeecCccEEEEe
Q 006890 470 FPNGTCGHTLDILARLPLWKYGL--DYRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYYEDGNFGIRLE 547 (627)
Q Consensus 470 ~p~G~~~~~l~~~a~~~l~~~G~--~~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~Gmv~siEPg~y~~~~~GvriE 547 (627)
+| |+++++|+.++++++++.|+ +|.|++||||| |++||.|.+... ++.+|+||||||+|||+|.+|.+|||||
T Consensus 279 ~p-G~~~~~v~~~~~~~~~~~G~~~~~~h~~GHgiG--l~~hE~P~i~~~--~~~~L~~Gmv~tiEPgiy~~g~~gvriE 353 (378)
T 4ege_A 279 RP-GVTAAQVDAAARDVLADAGLAEYFVHRTGHGIG--LCVHEEPYIVAG--NELPLVAGMAFSIEPGIYFPGRWGARIE 353 (378)
T ss_dssp CT-TCBHHHHHHHHHHHHHHTTCGGGCCSCSEEECS--SSSSEEEEECTT--CCCBCCTTBEEEECCEEEETTTEEEECB
T ss_pred CC-CCcHHHHHHHHHHHHHHcCCCCcCCCCCcccCC--CCcCCCCccCCC--CCCccCCCCEEEECCEEEeCCccEEEEe
Confidence 97 99999999999999999999 68999999999 999999987543 6789999999999999999999999999
Q ss_pred EeeEEecCCcccccCCcceeeeeccccccccccccc
Q 006890 548 NVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMIN 583 (627)
Q Consensus 548 d~v~V~~~g~~~~~~~~~~~~fe~lT~~p~~~~~i~ 583 (627)
|+|+||++|+ |.||..|.++-.|+
T Consensus 354 d~v~Vt~~G~------------e~Lt~~p~~l~~~~ 377 (378)
T 4ege_A 354 DIVVVTENGA------------LSVNNRPHELMVVP 377 (378)
T ss_dssp EEEEEETTEE------------EESCCSCCSCEEEC
T ss_pred eEEEEeCCcC------------eECCCCCCccEEcc
Confidence 9999999997 99999998765543
No 4
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=100.00 E-value=2.5e-63 Score=529.05 Aligned_cols=342 Identities=25% Similarity=0.393 Sum_probs=301.3
Q ss_pred HHHHHHHHHhhccCCcEEEEecCCcc-----ceEEccccCCCCCCcceeEEEEEECCceEEEEeCCCCCHHHHHhhhhCC
Q 006890 170 EKLKELREKLTNEKARGIIITTLDEV-----AWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFLKESG 244 (627)
Q Consensus 170 ~ri~~lr~~m~~~~~d~lll~~~dni-----~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~v~~~~~~~~~~~~l~~~~ 244 (627)
+|+++||+.|++.++|++++++++|+ +||||+++++ ++++|+.++++||++.++..+..++ .+
T Consensus 2 ~Rl~~Lr~~m~~~~lDa~li~~~~ni~~~~~~YLtGf~~~~--------~~llI~~~~~~L~~d~r~~~~a~~~----~~ 69 (359)
T 2zsg_A 2 DRSERLIQLISEEGIDAFLIMNIENSARASSVYFSGFTGSF--------SIILISENTRLLITDSRYTVQAKQE----TD 69 (359)
T ss_dssp CCHHHHHHHHHTTTCCEEEEEESTTTTHHHHHHHHCCCSSC--------EEEEEETTEEEEEECTTTHHHHHHH----CC
T ss_pred hHHHHHHHHHHHCCCcEEEEEChhHcccccCeeEeccCCCC--------EEEEEECCCCEEEECcccHHHHHhC----CC
Confidence 37999999999999999999999999 9999999865 7999999999999998876554333 36
Q ss_pred eEEeeC-Cc-hhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcCC----CeEEecCCccchhhhcCCHHHHHH
Q 006890 245 VEVRDY-DA-VSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNS----DKVLLQQSPLALAKAIKNPVELDG 318 (627)
Q Consensus 245 v~v~~y-~~-~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~~----~~~~~~~~~i~~~r~iK~~~Ei~~ 318 (627)
+++..| .+ ..+.+..+... .+.++|++|...+++..++.+.+ .++++.++++..+|++||++||+.
T Consensus 70 ~~v~~~~~~~~~~~l~~~L~~--------~~~~~vgvd~~~~~~~~~~~l~~~l~~~~~v~~~~~i~~lr~iK~~~Ei~~ 141 (359)
T 2zsg_A 70 FEVREVKGGDFIDVLKKTVND--------LKIKTIALEEERVSLSLFRRISSAFGDRKFIGIDDEVKQMRMVKDEGEIEK 141 (359)
T ss_dssp SEEEEC---CCHHHHHHHHHH--------TTCCEEEECGGGSBHHHHHHHHHHTTTCEEEECHHHHHHHHHBCCHHHHHH
T ss_pred CEEEEecCcchHHHHHHHHHh--------cCCCEEEEeCCcCCHHHHHHHHhhCCCcEEEEChhhhhhhhcCCCHHHHHH
Confidence 788887 33 33444444321 12468999988888887776643 478899899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCCCcCCccccc
Q 006890 319 LKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSV 398 (627)
Q Consensus 319 ~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~f~~i~~~ 398 (627)
||+|+++++.++..+++++ ++|+||.|+++.++..+ ...|..+.+|++|+++
T Consensus 142 ~r~a~~~~~~~~~~~~~~~---------------------------~~G~te~e~~~~~~~~~-~~~g~~~~~f~~iv~~ 193 (359)
T 2zsg_A 142 IKQAIEISERAFLETVQQI---------------------------RAGMTEKEIAALLEYTM-RKEGAEGVAFDTIVAS 193 (359)
T ss_dssp HHHHHHHHHHHHHHHHTTC---------------------------CTTCBHHHHHHHHHHHH-HHTTCSEESSCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHhc---------------------------cCCCCHHHHHHHHHHHH-HHcCCCCCCCCCEEEE
Confidence 9999999999999887764 78999999999999877 4567777899999999
Q ss_pred CCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhccCCCCcccch
Q 006890 399 GPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHT 478 (627)
Q Consensus 399 G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~~p~G~~~~~ 478 (627)
|+|++++||.|++ ++|++||+|++|+|++|+||++|+||||++|+|+++|+++|+.+++++.+++++++| |+++++
T Consensus 194 g~~~~~~h~~~~~---~~l~~gd~v~iD~g~~~~gy~~D~tRt~~~G~~~~~~~~~~~~v~~~~~~~~~~~~p-G~~~~~ 269 (359)
T 2zsg_A 194 GCRSALPHGKASD---KVVERGDVIVIDFGATYENYCADITRVVSIGEPSDEVKEVHSIVLEAQERALKIAKA-GVTGKL 269 (359)
T ss_dssp GGGGGSTTCCCCS---CBCCTTCEEEEEECEEETTEECCEEEEEESSSCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHH
T ss_pred ccccccccCCCCC---cccCCCCEEEEEEeEEECCEEEeeeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHccC-CCCHHH
Confidence 9999999999975 899999999999999999999999999999999999999999999999999999997 999999
Q ss_pred HHHHHHHHHHHcCC--CCcccccccccccCccccCCCcCCCCCCCCcccCCcEEeeCceeeecCccEEEEeEeeEEecCC
Q 006890 479 LDILARLPLWKYGL--DYRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYYEDGNFGIRLENVLVVTDAN 556 (627)
Q Consensus 479 l~~~a~~~l~~~G~--~~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~Gmv~siEPg~y~~~~~GvriEd~v~V~~~g 556 (627)
|+.++++++++.|+ +|.|++||||| +++||.|.+ +.+ ++.+|+||||||+|||+|.+|.+||||||+|+||++|
T Consensus 270 v~~~~~~~~~~~g~~~~~~h~~GHgiG--l~~he~p~i-~~~-~~~~l~~gmv~tiEPgiy~~~~~gvriEd~v~vt~~g 345 (359)
T 2zsg_A 270 LDSVAREFIREKGYGEFFGHSLGHGIG--LEVHEGPAI-SFR-NDSPLPENVVFTVEPGIYLEGKFGIRIEEDVVLKEQG 345 (359)
T ss_dssp HHHHHHHHHHHTTCGGGBCSCSEEECS--SSSSEEEEE-STT-CCCBCCTTBEEEECCEEEETTTEEEECBEEEEEETTE
T ss_pred HHHHHHHHHHHcCCcccCCCCCccccC--cccCCCCCc-CCC-CCCCcCCCCEEEECCEEEECCCcEEEEeeEEEEcCCc
Confidence 99999999999999 68999999999 999999965 333 6789999999999999999999999999999999999
Q ss_pred cccccCCcceeeeeccccccccc
Q 006890 557 TKFNFGDKGYLSFEHITWAPYQI 579 (627)
Q Consensus 557 ~~~~~~~~~~~~fe~lT~~p~~~ 579 (627)
+ |+||..|.+.
T Consensus 346 ~------------e~Lt~~~~~l 356 (359)
T 2zsg_A 346 C------------EILTTLPRSI 356 (359)
T ss_dssp E------------EECCCSCCSC
T ss_pred c------------eECCCCCccc
Confidence 6 9999888765
No 5
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}
Probab=100.00 E-value=9.7e-64 Score=535.45 Aligned_cols=361 Identities=20% Similarity=0.283 Sum_probs=303.1
Q ss_pred cccccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECC-ceEEEEeCCCCCHHHHH
Q 006890 160 QIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTN-AAFLYVDKRKVSSEVIS 238 (627)
Q Consensus 160 ~~~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~-~~~L~v~~~~~~~~~~~ 238 (627)
+..|.-.++++|++++|+.|+++|+|++++++++|++||||+++.+....| .+++++.+ .++++.+... ...
T Consensus 7 ~~~~~~~Ey~~Rl~rlr~~m~~~glDalli~~~~ni~YLTG~~~~~~~~~~---~~lvv~~~g~~~~~~~~~~-~~~--- 79 (377)
T 4fkc_A 7 HHHHGSMDYKRRIHKFQAHFGKKGFEGALVAPGSNFYYLTGFNPLGTLERL---FVLILPSEGLLTAIAPRLY-EKE--- 79 (377)
T ss_dssp -CCSSSSCHHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHSCCCCCCSSSC---CEEEEESSSCCEEEEEGGG-HHH---
T ss_pred CCCcchHHHHHHHHHHHHHHHHCCCCEEEECCChhheeecCCCCCCCCcce---EEEEEcCCCcEEEEeccch-HHH---
Confidence 455777899999999999999999999999999999999999987654444 34566655 4555554332 222
Q ss_pred hhhhCCeEEeeCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhc----CCCeEEecCCccchhhhcCCHH
Q 006890 239 FLKESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKL----NSDKVLLQQSPLALAKAIKNPV 314 (627)
Q Consensus 239 ~l~~~~v~v~~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l----~~~~~~~~~~~i~~~r~iK~~~ 314 (627)
++....++..|.+..++...++. .+... ...+.++++|. .+++..+..+ +..++++.++++..+|+|||++
T Consensus 80 -~~~~~~~~~~~~~~~~~~~~~~~-~l~~~--~~~~~~i~~d~-~~~~~~~~~l~~~~~~~~~~d~~~~i~~lR~iKs~~ 154 (377)
T 4fkc_A 80 -LEEFNGEVVLWSDSENPYKIFAT-KIKET--FKEGEKLLIDD-TMPVGVFLKAKDIFDKYSLHPISPVISELREIKDKD 154 (377)
T ss_dssp -HTTCSSEEEEECTTSCHHHHHHH-HHHHH--SCSSCEEEECT-TSCHHHHHHTHHHHTTSEEEESHHHHHHHHTSCCHH
T ss_pred -HHhcCCCEEEeccccCHHHHHHH-HHHHh--hhccceeeeec-cccHHHHHHHHhhCCCCeEEEhHHHHHHHHhcCCHH
Confidence 23445666766654433332221 11000 02467899985 4787776655 4568999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCCCcCCc
Q 006890 315 ELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPT 394 (627)
Q Consensus 315 Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~f~~ 394 (627)
||+.||+|+++++.++.++++++ ++|+||.|+++.++..+.++.|+.+.+|++
T Consensus 155 EI~~~r~A~~i~~~a~~~~~~~~---------------------------~~G~tE~el~~~~~~~~~~~~g~~~~~f~~ 207 (377)
T 4fkc_A 155 EIKAHKKAAEIVDKVFYRFIEGK---------------------------LEGKSERELANRIEYMIKNEFGADDVSFEP 207 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSC---------------------------CTTCBHHHHHHHHHHHHHTSTTCCEESSCC
T ss_pred HHHHHHHHHHHHHHHHHhhhhcc---------------------------CCCccHHHHHHHHhhhhhhccCCCCcccCc
Confidence 99999999999999998877653 799999999999998776666788899999
Q ss_pred ccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhccCCCCc
Q 006890 395 ISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGT 474 (627)
Q Consensus 395 i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~~p~G~ 474 (627)
|+++|+|++++||.|++ ++|++||+|++|+|++|+||++|+||||++|+|+++|+++|+.|++++.+++++++| |+
T Consensus 208 iv~~G~n~~~~H~~~~~---~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~p-G~ 283 (377)
T 4fkc_A 208 IVASGPNGANPHHRPSH---RKIRKGDVVIFDYGAKYLGYCSDVTRTVVVGPPSEEVKKVYEIVKEAQETAVQKVAE-GI 283 (377)
T ss_dssp EEEEGGGGGCTTCCCCS---CBCCTTCEEEEEECEEETTEECCEEEEEESSSCCTHHHHHHHHHHHHHHHHHHHCBT-TC
T ss_pred ccccccccccccccccc---ccccccccccccccccccCcccccceeEEEecCCHHHHHhhhhhHHHHHHHHHhhcC-Cc
Confidence 99999999999999986 899999999999999999999999999999999999999999999999999999997 99
Q ss_pred ccchHHHHHHHHHHHcCC--CCcccccccccccCccccCCCcCCCCCCCCcccCCcEEeeCceeeecCccEEEEeEeeEE
Q 006890 475 CGHTLDILARLPLWKYGL--DYRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 475 ~~~~l~~~a~~~l~~~G~--~~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~Gmv~siEPg~y~~~~~GvriEd~v~V 552 (627)
++++++.++++++++.|+ +|.|++||||| |++||.|.+.. + ++.+|+||||||+|||+|.+|.+||||||+|+|
T Consensus 284 ~~~~i~~~~~~~~~~~g~~~~~~h~~GHgiG--l~~hE~P~i~~-~-~~~~L~~Gmv~tiEPgiy~~g~~GvriEd~v~V 359 (377)
T 4fkc_A 284 PAEVVDATARGIISKYGYGEYFIHRTGHGLG--IDVHEEPYISP-G-NKKILKDGMVFTIEPGIYLQGKFGVRIEDDVAL 359 (377)
T ss_dssp BHHHHHHHHHHHHHHTTCTTTCCSCSEEECS--SSSSEEEEECS-S-CCCBCCTTCEEEECCEEEETTTEEEECBEEEEE
T ss_pred chhhhHHHHHHHHHHhcccccCCCCCeEeCC--CccccCCcccC-C-CCCEeCCCCEEEECCeeEECCccEEEEccEEEE
Confidence 999999999999999998 58999999999 99999998643 3 778999999999999999999999999999999
Q ss_pred ecCCcccccCCcceeeeeccccccccc
Q 006890 553 TDANTKFNFGDKGYLSFEHITWAPYQI 579 (627)
Q Consensus 553 ~~~g~~~~~~~~~~~~fe~lT~~p~~~ 579 (627)
|++|+ |+||..|.++
T Consensus 360 t~~g~------------e~Lt~~p~el 374 (377)
T 4fkc_A 360 VDKKG------------IRLTNADREL 374 (377)
T ss_dssp ETTEE------------EESCCSCCSC
T ss_pred ECCCc------------EECCCCCCCe
Confidence 99997 8999888643
No 6
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A
Probab=100.00 E-value=3.4e-63 Score=526.34 Aligned_cols=344 Identities=22% Similarity=0.245 Sum_probs=297.6
Q ss_pred HHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECCc-eEEEEeCCCCCHHHHHhhhhCCeEEee
Q 006890 171 KLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNA-AFLYVDKRKVSSEVISFLKESGVEVRD 249 (627)
Q Consensus 171 ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~~-~~L~v~~~~~~~~~~~~l~~~~v~v~~ 249 (627)
|++++|+.|+++++|++++++++|++||||+++. +++.+ .++++|+.++ ++||++..+... ... +++.+
T Consensus 2 R~~~l~~~m~~~~~d~~li~~~~n~~yltG~~~~-~~~~~--~~~l~i~~~~~~~l~~~~~~~~~-----~~~--~~v~~ 71 (356)
T 1wn1_A 2 RLEKFIHLLGERGFDGALISPGTNLYYLTGLRLH-EVGER--LAILAVSAEGDYRFLAPSLYENV-----VNN--FPATF 71 (356)
T ss_dssp HHHHHHHHHHHTTCSEEEECSSHHHHHHHCCCCS-CCTTS--CCEEEEETTSCEEEEEEGGGTTT-----TTT--SCEEE
T ss_pred HHHHHHHHHHHCCCcEEEECCCccceeecCCcCC-CCCCc--eEEEEEeCCCcEEEEECcccHHH-----hhC--CeEEE
Confidence 8999999999999999999999999999999873 44444 3788888665 999999877542 111 45666
Q ss_pred CCch---hHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcCC---CeEEecCCccchhhhcCCHHHHHHHHHHH
Q 006890 250 YDAV---SSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNS---DKVLLQQSPLALAKAIKNPVELDGLKKAH 323 (627)
Q Consensus 250 y~~~---~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~~---~~~~~~~~~i~~~r~iK~~~Ei~~~r~A~ 323 (627)
|.+. .+.+..+.... + ...++|++| ..+++..+..|.+ .++++.++++..+|++||++||+.||+|+
T Consensus 72 ~~~~~~~~~~l~~~l~~~----~--~~~~~i~~~-~~~~~~~~~~l~~~~~~~~~~~~~~i~~~R~iK~~~Ei~~~r~A~ 144 (356)
T 1wn1_A 72 WHDGENPYAKLREILEEL----G--ISKGRILIE-DTMRADWLIGIMKLGKFTFQPLSSLIKELRMIKDKEEVKMMEHAS 144 (356)
T ss_dssp ECTTSCHHHHHHHHHHHT----T--CSSEEEEEC-TTSBHHHHHHHGGGSCEEEEETHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred EcCCCCHHHHHHHHHHHh----c--CCCCEEEEe-CCcCHHHHHHHHcCCCCeEEEcHHHHHHHHhCCCHHHHHHHHHHH
Confidence 6432 23333332211 0 135689999 6788888888754 37889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCCCcCCcccccCCCcc
Q 006890 324 IRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAA 403 (627)
Q Consensus 324 ~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~f~~i~~~G~n~a 403 (627)
++++.++.++++++ ++|+||.|+++.++.++.+. +.+.+|++|+++|+|++
T Consensus 145 ~i~~~a~~~~~~~i---------------------------~~G~te~el~~~~~~~~~~~--~~~~~f~~iv~~g~n~~ 195 (356)
T 1wn1_A 145 RIADKVFEEILTWD---------------------------LIGMKERELALKIELLIREL--SDGIAFEPIVASGENAA 195 (356)
T ss_dssp HHHHHHHHHHTTSC---------------------------CTTCBHHHHHHHHHHHHHHH--SSEESSCCEEEEGGGGG
T ss_pred HHHHHHHHHHHHHc---------------------------cCCCcHHHHHHHHHHHHHHh--CcCCCCCcEEEEecccc
Confidence 99999999887764 78999999999999987554 56789999999999999
Q ss_pred cccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhccCCCCcccchHHHHH
Q 006890 404 IMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILA 483 (627)
Q Consensus 404 ~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a 483 (627)
++||.|++ ++|++||+|++|+|++|+||++|+||||++|+|+++|+++|+.+++++.+++++++| |+++++|+.++
T Consensus 196 ~~H~~~~~---~~l~~gd~v~iD~g~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~~p-G~~~~~i~~~~ 271 (356)
T 1wn1_A 196 NPHHEPGE---RKIRKGDIIILDYGARWKGYCSDITRTIGLGELDERLVKIYEVVKDAQESAFKAVRE-GIKAKDVDSRA 271 (356)
T ss_dssp CTTCCCCS---CBCCTTCEEEEEECEEETTEECCEEEEEESSSCCHHHHHHHHHHHHHHHHHHHHCBT-TSBHHHHHHHH
T ss_pred cccCCCCC---CeecCCCEEEEEEEEEECCEEeccEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHH
Confidence 99999975 899999999999999999999999999999999999999999999999999999997 99999999999
Q ss_pred HHHHHHcCC--CCcccccccccccCccccCCCcCCCCCCCCcccCCcEEeeCceeeecCccEEEEeEeeEEecCCccccc
Q 006890 484 RLPLWKYGL--DYRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYYEDGNFGIRLENVLVVTDANTKFNF 561 (627)
Q Consensus 484 ~~~l~~~G~--~~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~Gmv~siEPg~y~~~~~GvriEd~v~V~~~g~~~~~ 561 (627)
++++++.|+ +|.|++||||| +++||.|.+. .+ ++.+|+||||||+|||+|.+|.+||||||+|+||++|+
T Consensus 272 ~~~~~~~g~~~~~~h~~GHgiG--l~~he~p~i~-~~-~~~~l~~Gmv~tiEPgiy~~g~~gvriEd~v~Vt~~g~---- 343 (356)
T 1wn1_A 272 REVISKAGYGEYFIHRTGHGLG--LDVHEEPYIG-PD-GEVILKNGMTFTIEPGIYVPGLGGVRIEDDIVVDEGKG---- 343 (356)
T ss_dssp HHHHHTTTCGGGCCSCSEEECS--SSSSEEEEES-TT-CCCBCCTTCEEEECCEEEETTTEEEECBEEEEEETTEE----
T ss_pred HHHHHHcCCcccCCCCCcccCC--CccCCCcccC-CC-CCCCcCCCCEEEECCeeEeCCCcEEEEeeEEEEeCCcc----
Confidence 999999999 68999999999 9999999864 33 67899999999999999999999999999999999986
Q ss_pred CCcceeeeecccccccccc
Q 006890 562 GDKGYLSFEHITWAPYQIK 580 (627)
Q Consensus 562 ~~~~~~~fe~lT~~p~~~~ 580 (627)
|+||.+|.+..
T Consensus 344 --------e~Lt~~p~~l~ 354 (356)
T 1wn1_A 344 --------RRLTKAERELI 354 (356)
T ss_dssp --------EESCCCCCSCC
T ss_pred --------EECCCCCCcce
Confidence 99999988654
No 7
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A
Probab=100.00 E-value=2e-62 Score=519.37 Aligned_cols=337 Identities=24% Similarity=0.327 Sum_probs=294.9
Q ss_pred HHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEE-EEEECCceEEEEeCCCCCHHHHHhhhhCCeEE
Q 006890 169 VEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAF-AIVTTNAAFLYVDKRKVSSEVISFLKESGVEV 247 (627)
Q Consensus 169 ~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~-~lv~~~~~~L~v~~~~~~~~~~~~l~~~~v~v 247 (627)
.+|++++|+.|+++++|++++++++|++||||+++.+ .+| ++++.++..++++.+. ..+ ++ ..++++
T Consensus 5 ~~R~~~l~~~m~~~~~da~li~~~~n~~yltg~~~~~-------~~~~llv~~~~~~l~~~~~~-~~~-~~---~~~~~v 72 (351)
T 1wy2_A 5 NEKVKKIIEFMDKNSIDAVLIAKNPNVYYISGASPLA-------GGYILITGESATLYVPELEY-EMA-KE---ESNIPV 72 (351)
T ss_dssp CHHHHHHHHHHHHTTCSEEEECSHHHHHHHHSCCCSS-------CCEEEEETTEEEEEEEHHHH-HHH-HH---HCSSCE
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCceEecCCCCCC-------CcEEEEEECCCcEEEECchH-HHH-hh---cCCCeE
Confidence 4799999999999999999999999999999998765 246 7788888888888765 322 22 235677
Q ss_pred eeCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcCC----CeEEecCCccchhhhcCCHHHHHHHHHHH
Q 006890 248 RDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNS----DKVLLQQSPLALAKAIKNPVELDGLKKAH 323 (627)
Q Consensus 248 ~~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~~----~~~~~~~~~i~~~r~iK~~~Ei~~~r~A~ 323 (627)
..|+.+ +.+..+.. +.++|++| ..+++..++.|.+ .++++.++++..+|++||++||+.||+|+
T Consensus 73 ~~~~~~-~~l~~~l~----------~~~~ig~e-~~~~~~~~~~l~~~~~~~~~~~~~~~i~~~r~iK~~~Ei~~~r~A~ 140 (351)
T 1wy2_A 73 EKFKKM-DEFYKALE----------GIKSLGIE-SSLPYGFIEELKKKANIKEFKKVDDVIRDMRIIKSEKEIKIIEKAC 140 (351)
T ss_dssp EEESSH-HHHHHHHT----------TCSEEEEC-TTCBHHHHHHHHHHSCCCEEEECHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred EEeCcH-HHHHHHHc----------cCCEEEEc-CcCCHHHHHHHHhhCCCCeEEEcHHHHHHHHhCCCHHHHHHHHHHH
Confidence 777653 33333332 23589999 7789888777643 27899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCCCcCCcccccCCCcc
Q 006890 324 IRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAA 403 (627)
Q Consensus 324 ~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~f~~i~~~G~n~a 403 (627)
++++.++..+++++ ++|+||.|+++.++..+ ...|..+.+|++|+++|+|++
T Consensus 141 ~i~~~a~~~~~~~i---------------------------~~G~te~el~~~~~~~~-~~~g~~~~~f~~iv~~g~n~~ 192 (351)
T 1wy2_A 141 EIADKAVMAAIEEI---------------------------TEGKKEREVAAKVEYLM-KMNGAEKPAFDTIIASGYRSA 192 (351)
T ss_dssp HHHHHHHHHHHHHC---------------------------CTTCBHHHHHHHHHHHH-HHTTCSEESSCCEEEEGGGGG
T ss_pred HHHHHHHHHHHHhc---------------------------cCCCcHHHHHHHHHHHH-HHcCCCCCCCCCEEEEccccc
Confidence 99999999887764 78999999999999877 456777889999999999999
Q ss_pred cccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhccCCCCcccchHHHHH
Q 006890 404 IMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILA 483 (627)
Q Consensus 404 ~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a 483 (627)
++||.|++ ++|++||+|++|+|++|+||++|+||||++|+|+++|+++|+.+++++.+++++++| |+++++|+.++
T Consensus 193 ~~H~~~~~---~~l~~gd~v~iD~G~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~~p-G~~~~~v~~~~ 268 (351)
T 1wy2_A 193 LPHGVASD---KRIERGDLVVIDLGALYQHYNSDITRTIVVGSPNEKQKEIYEIVLEAQKKAVESAKP-GITAKELDSIA 268 (351)
T ss_dssp STTCBCCS---CBCCTTCEEEEEECEEETTEECCEEEEEESSCCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHH
T ss_pred cccCCCCC---cccCCCCEEEEEEEEEECCEEecceEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHH
Confidence 99999985 899999999999999999999999999999999999999999999999999999997 99999999999
Q ss_pred HHHHHHcCC--CCcccccccccccCccccCCCcCCCCCCCCcccCCcEEeeCceeeecCccEEEEeEeeEEecCCccccc
Q 006890 484 RLPLWKYGL--DYRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYYEDGNFGIRLENVLVVTDANTKFNF 561 (627)
Q Consensus 484 ~~~l~~~G~--~~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~Gmv~siEPg~y~~~~~GvriEd~v~V~~~g~~~~~ 561 (627)
++++++.|+ +|.|++||||| +++||+|.+ +.+ ++.+|+||||||+|||+|.+|.+||||||+|+|| +|+
T Consensus 269 ~~~~~~~g~~~~~~h~~GHgiG--l~~hE~p~i-~~~-~~~~l~~Gmv~tiEPgiy~~g~~gvriEd~v~Vt-~G~---- 339 (351)
T 1wy2_A 269 RNIIAEYGYGEYFNHSLGHGVG--LEVHEWPRV-SQY-DETVLREGMVITIEPGIYIPKIGGVRIEDTILIT-KNG---- 339 (351)
T ss_dssp HHHHHHTTCGGGCCSCSEEECS--SSSSEEEEE-STT-CCCBCCTTCEEEECCEEEETTTEEEECBEEEEEE-TTE----
T ss_pred HHHHHHcCCcccCCCCcccccC--CCcCCCCcc-CCC-CCCCcCCCCEEEECCEEEeCCCCeEEEeeEEEEC-CCc----
Confidence 999999998 58999999999 999999976 333 6789999999999999999999999999999999 996
Q ss_pred CCcceeeee-cccccccc
Q 006890 562 GDKGYLSFE-HITWAPYQ 578 (627)
Q Consensus 562 ~~~~~~~fe-~lT~~p~~ 578 (627)
| .||..|.+
T Consensus 340 --------e~~Lt~~p~~ 349 (351)
T 1wy2_A 340 --------SKRLTKTERE 349 (351)
T ss_dssp --------EEESCCSCSC
T ss_pred --------eecCCCCCcc
Confidence 8 99988875
No 8
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=100.00 E-value=1.3e-60 Score=525.24 Aligned_cols=373 Identities=15% Similarity=0.172 Sum_probs=308.6
Q ss_pred ccccCCcHHHHHHHHHHHhh--ccCCcEEEEecCC----cc--------ceEEccccCCCCCCcceeEEEEEECCceEEE
Q 006890 161 IEFAGSSVVEKLKELREKLT--NEKARGIIITTLD----EV--------AWLYNIRGTDVPYCPVVHAFAIVTTNAAFLY 226 (627)
Q Consensus 161 ~~~~G~~~~~ri~~lr~~m~--~~~~d~lll~~~d----ni--------~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~ 226 (627)
..+++.++.+|+++||+.|+ ++++|++++++++ |+ +||||+++.+ ++++|+.++++||
T Consensus 6 ~~~~~~~~~~Rl~~Lr~~m~~~~~giDa~li~~~~~~~~~~y~~~~~~~~yLtGf~~~~--------~~lvVt~d~~~L~ 77 (467)
T 3biq_A 6 LNIDFDVFKKRIELLYSKYNEFEGSPNSLLFVLGSSNAENPYQKTTILHNWLLSYEFPA--------TLIALVPGKVIII 77 (467)
T ss_dssp -CCCHHHHHHHHHHHHHHGGGSTTCCSEEEEEECSCCTTSTTCHHHHHHHHHHSSCCSS--------EEEEEETTEEEEE
T ss_pred cccCHHHHHHHHHHHHHHHHhhhcCCCEEEEEcCCCCCCCCCccchhhhhHhhCCCCCC--------EEEEEECCeEEEE
Confidence 35788999999999999999 9999999999998 99 6999998632 7999999899999
Q ss_pred EeCCCCC--HHHHH--hhhhC--CeEEeeC--Cc------hhHHHHHHhhccCCCCCCCCCCCEEEEc-CCCCcHHHHhh
Q 006890 227 VDKRKVS--SEVIS--FLKES--GVEVRDY--DA------VSSDVVLLQSNQLNPPADVQGSDLIWAD-PNSCSYALYSK 291 (627)
Q Consensus 227 v~~~~~~--~~~~~--~l~~~--~v~v~~y--~~------~~~~~~~~~~~~l~~~~~~~~~~~I~iD-~~~~~~~~~~~ 291 (627)
++.++.. ..+++ .+... ++++..| .+ ..+.+..+... .+++|+++ ...++...+..
T Consensus 78 ~d~~~~~y~~~a~~~~e~~~~~~~v~v~~~~~~~~~~~~~~~~~L~~~L~~---------~~~~Igv~~~~~~s~~~~~~ 148 (467)
T 3biq_A 78 TSSAKAKHLQKAIDLFKDPESKITLELWQRNNKEPELNKKLFDDVIALINS---------AGKTVGIPEKDSYQGKFMTE 148 (467)
T ss_dssp EEHHHHHHHHHHHGGGCC--CCCEEEEEEECTTCHHHHHHHHHHHHHHHHH---------HCSEEEECTTCCCCSHHHHH
T ss_pred ECCcchHHHHHHhhhcccccCCCCeEEEEecccccccchhhHHHHHHHHHh---------hCCEEEEecCcccchhHHHH
Confidence 9986532 12222 11111 3666666 32 22333333211 14589995 45667766654
Q ss_pred cC----------CCeEEecCCccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccc
Q 006890 292 LN----------SDKVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKK 361 (627)
Q Consensus 292 l~----------~~~~~~~~~~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 361 (627)
|. ..++++..+++..+|+|||++||+.||+|+++++.++..+++++++.+..
T Consensus 149 L~~~l~~~~~~~~~~lv~~~~~i~~lr~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i~~~i~~------------------ 210 (467)
T 3biq_A 149 WNPVWEAAVKENEFNVIDISLGLSKVWEVKDVNEQAFLSVSSKGSDKFMDLLSNEMVRAVDE------------------ 210 (467)
T ss_dssp HHHHHHHHHHHHTCEEEECHHHHHHHTCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------------------
T ss_pred HHHHHHhhcccCCceeechHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc------------------
Confidence 42 35788999999999999999999999999999999999999999776532
Q ss_pred cCCCCCcCHHHHHHHHHHHHHhh----cC-------------C----CCCcCCcccccCCCcc-cccccCCCCccCCCCC
Q 006890 362 HSGTVKLTEVTVSDKLESFRASK----EH-------------F----RGLSFPTISSVGPNAA-IMHYSPQSETCAEMDP 419 (627)
Q Consensus 362 ~~~~~g~tE~ei~~~l~~~~~~~----~g-------------~----~~~~f~~i~~~G~n~a-~~h~~~~~~~~~~l~~ 419 (627)
..|+||.++++.++.++.+. .| + .+.+|++|+++|+|++ ++||.|++ ++|++
T Consensus 211 ---g~g~te~el~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~f~~iv~~G~n~~~~~H~~~~~---~~l~~ 284 (467)
T 3biq_A 211 ---ELKITNAKLSDKIENKIDDVKFLKQLSPDLSALCPPNYKFNFDLLDWTYSPIIQSGKKFDLRVSARSTN---DQLYG 284 (467)
T ss_dssp ---TCCCBHHHHHHHHHHGGGCHHHHHHHHHHHHTTSCTTCCCCGGGEEESSCCEEECTTCCCCSTTCCCCS---SBCCC
T ss_pred ---cCCccHHHHHHHHHHHHHhhhhhhcCCccccccccccccCCcccccCCCCCeEEecCCcceeeccCCCC---CccCC
Confidence 34899999999999876430 22 2 3679999999999999 99999975 89999
Q ss_pred CCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhc-cCCCCcccchHHHHHHHHHHHcC--C--CC
Q 006890 420 NSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNA-VFPNGTCGHTLDILARLPLWKYG--L--DY 494 (627)
Q Consensus 420 gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~-~~p~G~~~~~l~~~a~~~l~~~G--~--~~ 494 (627)
||+|++|+|++|.||++|+||||++| |+++|+++|+.|++++.+++++ ++| |+++++|+.++++++++.| + +|
T Consensus 285 gd~v~iD~g~~~~gy~sD~tRT~~~g-~~~~~~~~~~~v~~a~~~~~~~~~~p-G~~~~~v~~~~~~~~~~~g~g~~~~~ 362 (467)
T 3biq_A 285 NGCILASCGIRYNNYCSNITRTFLID-PSEEMANNYDFLLTLQKEIVTNILKP-GRTPKEVYESVIEYIEKTKPELVPNF 362 (467)
T ss_dssp SEEEEEEECEEETTEECCEEEEEEES-CCHHHHHHHHHHHHHHHHHHHHTCCT-TCCHHHHHHHHHHHHHHHCGGGGGGB
T ss_pred CCEEEEEEeEEECCEEeeeeEEEEeC-CCHHHHHHHHHHHHHHHHHHHhCCcC-CCcHHHHHHHHHHHHHHhCcchhhcC
Confidence 99999999999999999999999999 9999999999999999999999 987 9999999999999999997 3 68
Q ss_pred cccccccccccCccccCCCcCCCCCC-CCcccCCcEEeeCceee-e-----cCccEEEEeEeeEEe--cCCcccccCCcc
Q 006890 495 RHGTGHGVGSYLNVHEGPQSISFKPR-NVPIHASMTATDEPGYY-E-----DGNFGIRLENVLVVT--DANTKFNFGDKG 565 (627)
Q Consensus 495 ~h~~GHgvG~~l~vhE~P~~~~~~~~-~~~l~~Gmv~siEPg~y-~-----~~~~GvriEd~v~V~--~~g~~~~~~~~~ 565 (627)
.|++||||| |++||.|.+++.+ + +.+|+||||||+|||+| . +|.+||||||+|+|| ++|+
T Consensus 363 ~h~~GHgiG--l~~hE~p~~~~~~-~~~~~l~~Gmv~tiEPgiy~~~~~~~~g~~gvriEd~v~Vt~~~~G~-------- 431 (467)
T 3biq_A 363 TKNIGSLIG--LEFRDSNFILNVK-NDYRKIQRGDCFNISFGFNNLKDSQSANNYALQLADTVQIPLDETEP-------- 431 (467)
T ss_dssp CSCCEEECS--SSSCCGGGBSSTT-CCSCCCCTTCEEEEEEEEEEECCSSCSSCEEEEEEEEEECCSSTTSC--------
T ss_pred CCCcccccc--cccccCCccCCCC-CCCCccCCCCEEEEeCeEEeeecCCCCCccEEEEEEEEEEecCCCCc--------
Confidence 999999999 9999999866654 6 78999999999999999 7 889999999999999 8885
Q ss_pred eeeeeccc-ccccccccccccCCCHHH
Q 006890 566 YLSFEHIT-WAPYQIKMINLKSLTPEE 591 (627)
Q Consensus 566 ~~~fe~lT-~~p~~~~~i~~~~l~~~e 591 (627)
|+|| .+|+++..|+..|++++|
T Consensus 432 ----e~Lt~~~p~~~~~i~~~~~~~~e 454 (467)
T 3biq_A 432 ----PRFLTNYTKAKSQISFYFNNEEE 454 (467)
T ss_dssp ----CEESCCSCCCHHHHEECC-----
T ss_pred ----EEecccCCCCHHHHHHHHhcccc
Confidence 9999 999999999999999988
No 9
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=100.00 E-value=7.2e-60 Score=509.89 Aligned_cols=360 Identities=13% Similarity=0.093 Sum_probs=301.9
Q ss_pred cccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECCceEEEEeCCCCCHHHHHhhh
Q 006890 162 EFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFLK 241 (627)
Q Consensus 162 ~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~v~~~~~~~~~~~~l~ 241 (627)
.++..++.+|+++||+.|+++++|++++++++|++|||||++++. ..| ++++|+.+++.||++.++..+..++ +.
T Consensus 18 ~~~~~e~~~Rl~~Lr~~m~~~~lDa~li~~~~ni~yltgf~~s~~-~~p---~~llV~~~~~~l~~~~~~~~~a~~~-~~ 92 (402)
T 1kp0_A 18 PFSZAEMTRRZBRLRAWMAKSBIDAVLFTSYHNINYYSGWLYCYF-GRK---YAZVIBZVKAVTISKGIDGGMPWRR-SF 92 (402)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHTCSEEEECSHHHHHHHHSCCCCCT-TCC---CEEEECSSCEEEEEEGGGTTHHHHH-CS
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEcCCCCceEecCCCCCCC-Cce---EEEEEeCCCCEEEeccchhhhhHHh-cc
Confidence 467788999999999999999999999999999999999998654 344 7889998889999998887765443 21
Q ss_pred hCCeEEeeCC--chhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcC----CCeEEecCCccchhhhcCCHHH
Q 006890 242 ESGVEVRDYD--AVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLN----SDKVLLQQSPLALAKAIKNPVE 315 (627)
Q Consensus 242 ~~~v~v~~y~--~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~----~~~~~~~~~~i~~~r~iK~~~E 315 (627)
...+.+.+|. ...+.+..+.. .+++|++|...+++..++.+. ..++++..+++..+|++||++|
T Consensus 93 ~~~v~~~~~~~~~~~~~l~~~l~----------~~~~igvd~~~~~~~~~~~l~~~l~~~~~v~~~~~i~~lR~iKs~~E 162 (402)
T 1kp0_A 93 GBNIVYTDWKRDNFYSAVKKLVK----------GAKZIGIEHDHVTLBHRRZLZKALPGTEFVDVGZPVMWZRVIKSSEE 162 (402)
T ss_dssp SEEEEECSSSTTHHHHHHHHHHT----------TCSEEEECTTTCBHHHHHHHHHHSTTCEEEECHHHHHHHHTSCCHHH
T ss_pred CcceEeccccccCHHHHHHHHhc----------cCCEEEEecCCCCHHHHHHHHHhCCCCEEEECHHHHHHHHHcCCHHH
Confidence 1122222331 22233333321 356899999888988877664 3478998899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhc--CC-CCC--
Q 006890 316 LDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKE--HF-RGL-- 390 (627)
Q Consensus 316 i~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~--g~-~~~-- 390 (627)
|+.||+|+++++.++..+++++ ++|+||.|+++.++.++.... .+ .+.
T Consensus 163 i~~~r~A~~i~~~a~~~~~~~i---------------------------~~G~te~el~~~~~~~~~~~g~~~~~~~~~~ 215 (402)
T 1kp0_A 163 ZBLIRZGARISDIGGAATAAAI---------------------------SAGVPEYEVAIATTBAMVRZIARBFPYVELM 215 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC---------------------------CTTCBHHHHHHHHHHHHHHHHHHHSSSCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHh---------------------------cCCCcHHHHHHHHHHHHHHhcccccCccccc
Confidence 9999999999999999888775 789999999999988664331 11 122
Q ss_pred cCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhccC
Q 006890 391 SFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVF 470 (627)
Q Consensus 391 ~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~~ 470 (627)
.+.+|+++|+|++++||.|++ ++|++||+|++|+|++|+||++|+||||++|+|+++|+++|+.|++++.+++++++
T Consensus 216 ~~~~iv~~g~n~~~~H~~~~~---~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~ 292 (402)
T 1kp0_A 216 DTWIWFQSGINTDGAHNPVTB---RVVZRGDILSLNCFPMIFGYYTALERTLFLZZVBDASLZIWZKNTAVHRRGLZLIK 292 (402)
T ss_dssp EEEEEEEEGGGGGSTTCCEEC---CBCCTTCEEEEEEEEEETTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CccceeecccccccccCCCCC---cccCCCCEEEEEEEeeECCEeeecEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 233589999999999999875 89999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccchHHHHHHHHHHHcCCC--CcccccccccccCccccCCCcCCC--CC-CCCcccCCcEEeeCceeeec----Cc
Q 006890 471 PNGTCGHTLDILARLPLWKYGLD--YRHGTGHGVGSYLNVHEGPQSISF--KP-RNVPIHASMTATDEPGYYED----GN 541 (627)
Q Consensus 471 p~G~~~~~l~~~a~~~l~~~G~~--~~h~~GHgvG~~l~vhE~P~~~~~--~~-~~~~l~~Gmv~siEPg~y~~----~~ 541 (627)
| |+++++|+.++++++++.|+. +.|++||||| +++||.|..++. .+ ++.+|+||||||+|||+|.+ +.
T Consensus 293 p-G~~~~~i~~~~~~~~~~~G~~~~~~~~~GHgiG--~~~He~~~~~g~~~~~~~~~~l~~Gmv~tiEPgiy~~~~~~~~ 369 (402)
T 1kp0_A 293 P-GARCKDIASELNBMYRZWDLLRYRTFGYGHSFG--VLBHYYGREAGVELREDIZTVLEPGMVVSMEPMVMBPEGEPGA 369 (402)
T ss_dssp T-TCBHHHHHHHHHHHHHHTTCGGGBCSCSCBBCE--EEETTEECCTTCBCCTTCCCBCCTTCEEEECCEEEECTTSTTC
T ss_pred C-CCcHHHHHHHHHHHHHHcCCCeecCCCcccccC--CccccCCcccCcccCCCCCCccCCCcEEEECCceeecCccCCC
Confidence 8 999999999999999999995 8899999999 899998875321 11 57899999999999999998 88
Q ss_pred cEEEEeEeeEEecCCcccccCCcceeeeeccccccccccc
Q 006890 542 FGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKM 581 (627)
Q Consensus 542 ~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~~p~~~~~ 581 (627)
+|+|+||+|+||++|+ |+||.+|+++++
T Consensus 370 ~G~ried~v~Vt~~g~------------e~Lt~~p~~~~~ 397 (402)
T 1kp0_A 370 GGYREHDILVIKENBT------------ENITGFPFGPEH 397 (402)
T ss_dssp EEEECBEEEEEETTEE------------EECCCSCCSTTT
T ss_pred CcEEEEEEEEEcCCcc------------eECCCCCCchHH
Confidence 9999999999999986 999999998765
No 10
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=100.00 E-value=1.7e-58 Score=498.35 Aligned_cols=362 Identities=15% Similarity=0.123 Sum_probs=296.3
Q ss_pred ccccccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEE-EEECCceEEEEeCCCCCHHHH
Q 006890 159 QQIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFA-IVTTNAAFLYVDKRKVSSEVI 237 (627)
Q Consensus 159 ~~~~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~-lv~~~~~~L~v~~~~~~~~~~ 237 (627)
.+..|++.++.+|++++|+.|+++++|++++++++|++||+|+. |+|++.+++ +|+.++++++++..+.....+
T Consensus 14 ~~~~~~~~e~~~R~~~l~~~m~~~~~da~li~~~~ni~yltg~~-----~~~~~~~~~llv~~~~~~l~~~~~~~~~~~~ 88 (401)
T 1chm_A 14 VRSTFSAQEYANRQARLRAHLAAENIDAAIFTSYHNINYYSDFL-----YCSFGRPYALVVTEDDVISISANIDGGQPWR 88 (401)
T ss_dssp CCCSSCHHHHHHHHHHHHHHHHHTTCSEEEECSHHHHHHHHSCC-----CCCTTCCCEEEECSSCEEEEEEGGGTTHHHH
T ss_pred cccCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCcccceeeCCCC-----cCCCCCeEEEEEecCCCEEEecccchhhHHH
Confidence 45678999999999999999999999999999999999998875 456655555 467788888988776655333
Q ss_pred HhhhhCCeEEeeC--CchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcC----CCeEEecCCccchhhhcC
Q 006890 238 SFLKESGVEVRDY--DAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLN----SDKVLLQQSPLALAKAIK 311 (627)
Q Consensus 238 ~~l~~~~v~v~~y--~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~----~~~~~~~~~~i~~~r~iK 311 (627)
+.+....+.+.+| .++.+.+..+. . ..++|++|...+++..++.|. ..++++.++++..+|+||
T Consensus 89 ~~~~~~~v~~~~~~~~~~~~~l~~~l----~------~~~~i~ve~~~~~~~~~~~l~~~~~~~~~~~~~~~i~~~R~iK 158 (401)
T 1chm_A 89 RTVGTDNIVYTDWQRDNYFAAIQQAL----P------KARRIGIEHDHLNLQNRDKLAARYPDAELVDVAAACMRMRMIK 158 (401)
T ss_dssp HCCSSEEEEECTTSTTHHHHHHHHHC----S------CCSEEEECTTTCBHHHHHHHHHHCTTCEEEECHHHHHHHHTSC
T ss_pred hhcccceeeeccccccCHHHHHHHHh----c------cCCeEEEecCCCCHHHHHHHHhhCCCCEEEEhHHHHHHHHhcC
Confidence 3221011222222 12233333332 1 356899998888988887764 458999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhh---cCCC
Q 006890 312 NPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASK---EHFR 388 (627)
Q Consensus 312 ~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~---~g~~ 388 (627)
|++||+.||+|+++++.++..+.+.+ ++|+||.|+++.++..+... ....
T Consensus 159 s~~Ei~~~r~A~~i~~~~~~~~~~~i---------------------------~~G~tE~el~~~~~~~~~~~~~~~~~~ 211 (401)
T 1chm_A 159 SAEEHVMIRHGARIADIGGAAVVEAL---------------------------GDQVPEYEVALHATQAMVRAIADTFED 211 (401)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------CTTCBHHHHHHHHHHHHHHHHHHHCSS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHc---------------------------cCCCcHHHHHHHHHHHHHHhccccCCC
Confidence 99999999999999999988766643 78999999999887644322 1112
Q ss_pred CCcCCc--ccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Q 006890 389 GLSFPT--ISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALG 466 (627)
Q Consensus 389 ~~~f~~--i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~ 466 (627)
..+|++ ++++|.|++.+|+.|++ ++|++||+|++|+|++|+||++|+||||++|+|+++|+++|+.|++++.+++
T Consensus 212 ~~~~~~~~~~~~g~n~~~~H~~~~~---~~l~~gd~v~iD~G~~~~gY~sD~tRT~~~G~~~~~~~~~y~~v~~a~~~~i 288 (401)
T 1chm_A 212 VELMDTWTWFQSGINTDGAHNPVTT---RKVNKGDILSLNCFPMIAGYYTALERTLFLDHCSDDHLRLWQVNVEVHEAGL 288 (401)
T ss_dssp CCBCCCEEEEEEGGGGGSTTCCEES---CBCCTTCEEEEEEECEETTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccCcceeeeecccccccccCCCC---CccCCCCEEEEEEEEeeCCEeecceEEEECCCCCHHHHHHHHHHHHHHHHHH
Confidence 235776 47899999999999875 8999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCcccchHHHHHHHHHHHcCC--CCcccccccccccCccccCCCcC----CCCCCCCcccCCcEEeeCceeeec-
Q 006890 467 NAVFPNGTCGHTLDILARLPLWKYGL--DYRHGTGHGVGSYLNVHEGPQSI----SFKPRNVPIHASMTATDEPGYYED- 539 (627)
Q Consensus 467 ~~~~p~G~~~~~l~~~a~~~l~~~G~--~~~h~~GHgvG~~l~vhE~P~~~----~~~~~~~~l~~Gmv~siEPg~y~~- 539 (627)
++++| |+++++|+.++++.+++.|+ .+.|++||||| +.+||.|... ..+ ++.+|+||||||+|||+|.+
T Consensus 289 ~~~~p-G~~~~~v~~~~~~~~~~~G~~~~~~~~~GHgiG--~~~h~~~~~~g~~~~~~-~~~~L~~Gmv~tiEPgiy~~~ 364 (401)
T 1chm_A 289 KLIKP-GARCSDIARELNEIFLKHDVLQYRTFGYGHSFG--TLSHYYGREAGLELRED-IDTVLEPGMVVSMEPMIMLPE 364 (401)
T ss_dssp HHCCT-TCBHHHHHHHHHHHHHHHTCGGGBCSCSCBBCS--BEETTEECCTTSBCCTT-CCCBCCTTCEEEECCEEEECT
T ss_pred HHcCC-CCcHHHHHHHHHHHHHHcCCCcccCCCCCcccC--ccCCccccccCccccCC-CCCccCCCCEEEEcCeeeecc
Confidence 99998 99999999999999999999 36799999999 8899976532 222 57899999999999999998
Q ss_pred ---CccEEEEeEeeEEecCCcccccCCcceeeeeccccccccccc
Q 006890 540 ---GNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKM 581 (627)
Q Consensus 540 ---~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~~p~~~~~ 581 (627)
|.+|+||||+|+||++|+ |+||.+|++.++
T Consensus 365 ~~~g~~GvriEd~vlVt~~G~------------e~LT~~p~~~~~ 397 (401)
T 1chm_A 365 GLPGAGGYREHDILIVNENGA------------ENITKFPYGPEK 397 (401)
T ss_dssp TSTTCEEEECBEEEEEETTEE------------EECCCSCCSHHH
T ss_pred ccCCCCeEEEeeeEEECCCcc------------eECCCCCCChhh
Confidence 889999999999999996 999999987643
No 11
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=100.00 E-value=1.6e-58 Score=505.64 Aligned_cols=368 Identities=15% Similarity=0.173 Sum_probs=300.1
Q ss_pred ccccCCcHHHHHHHHHHHhhc--------cCCcEEEEecCC----c--------cceEEccccCCCCCCcceeEEEEEEC
Q 006890 161 IEFAGSSVVEKLKELREKLTN--------EKARGIIITTLD----E--------VAWLYNIRGTDVPYCPVVHAFAIVTT 220 (627)
Q Consensus 161 ~~~~G~~~~~ri~~lr~~m~~--------~~~d~lll~~~d----n--------i~wLtg~rg~d~~~~P~~~a~~lv~~ 220 (627)
..+++.++.+|+++||+.|++ .++|++++++++ + ++||||+++.+ ++++++.
T Consensus 6 ~~~~~~~~~~Rl~~L~~~m~~~~~~~~~~~g~Dalli~~~~~d~~~~y~q~~~~~~yLtG~~~~~--------~~lvi~~ 77 (444)
T 3cb6_A 6 YEIDEITFHKRLGILLTSWKNEEDGKTLFQDCDSILVTVGAHDDTNPYQKSTALHTWLLGYEFPS--------TLILLEK 77 (444)
T ss_dssp CCCCHHHHHHHHHHHHHHHHSHHHHHHTSTTCSEEEEEECSCCTTCCCCHHHHHHHHHHSSCCSS--------EEEEEET
T ss_pred CCcCHHHHHHHHHHHHHHhhhcCcccccccCCCEEEEEeCCCCCCCCcccchhhhHHHhCCCCCC--------EEEEEeC
Confidence 457889999999999999998 999999999996 6 89999998765 7889998
Q ss_pred CceEEEEeCCCC--CHHHH-HhhhhCCeEEeeC-CchhH---HHHHHhhccCCCCCCCCCCCEEEEcC-CCCcHHH----
Q 006890 221 NAAFLYVDKRKV--SSEVI-SFLKESGVEVRDY-DAVSS---DVVLLQSNQLNPPADVQGSDLIWADP-NSCSYAL---- 288 (627)
Q Consensus 221 ~~~~L~v~~~~~--~~~~~-~~l~~~~v~v~~y-~~~~~---~~~~~~~~~l~~~~~~~~~~~I~iD~-~~~~~~~---- 288 (627)
++++||++..+. ....+ ..+....+++..| .+... .+..+.. .+.. .+++|+++. ...+...
T Consensus 78 ~~~~l~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~l~~-----~~~~ig~~~~~~~~~~~~~~l 151 (444)
T 3cb6_A 78 HRITILTSVNKANMLTKLAETKGAAADVNILKRTKDAEENKKLFEKIIE-YIRA-----TNKKVGVFPKDKTQGKFINEW 151 (444)
T ss_dssp TEEEEEEEHHHHTTTHHHHTCTTCSSEEEEEEECSCHHHHHHHHHHHHH-HHHT-----TTSEEEECTTCCCCSHHHHHH
T ss_pred CcEEEEEcCchHHHHhhhhccccCCccEEEEecccccccCHHHHHHHHH-HHHh-----cCCEEEEeccccchhHHHHHH
Confidence 889999987532 12222 2221113555555 32211 1222221 1111 246899975 4455433
Q ss_pred HhhcC----CCeEEecCCccchhhhcCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhhccccccccccccccccC
Q 006890 289 YSKLN----SDKVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIV-QYIIWLDKQMQEIYGASGYFLEGEATKEKKHS 363 (627)
Q Consensus 289 ~~~l~----~~~~~~~~~~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (627)
...+. ..++++.++++..+|+|||++||+.||+|+++++.++. .++.|+.+.+
T Consensus 152 ~~~l~~~~~~~~~~~~~~~i~~~r~iK~~~Ei~~~r~A~~i~~~a~~~~~~~~~~~~i---------------------- 209 (444)
T 3cb6_A 152 DSIFEPVKSEFNLVDASLGLAKCLAIKDEQELANIKGASRVSVAVMSKYFVDELSTYI---------------------- 209 (444)
T ss_dssp HHHHTTTGGGSEEEECHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH----------------------
T ss_pred HHHHhhccCCceEeecHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------------------
Confidence 23442 35789999999999999999999999999999999999 7887876655
Q ss_pred CCCC--cCHHHHHHHHHHHHHhh-------cC---C----CCCcCCcccccCCCcc-cccccCCCCccCCCCCCCeEEEe
Q 006890 364 GTVK--LTEVTVSDKLESFRASK-------EH---F----RGLSFPTISSVGPNAA-IMHYSPQSETCAEMDPNSIYLCD 426 (627)
Q Consensus 364 ~~~g--~tE~ei~~~l~~~~~~~-------~g---~----~~~~f~~i~~~G~n~a-~~h~~~~~~~~~~l~~gd~vliD 426 (627)
++| +||.++++.++.++... .| + .+++|++|+++|+|++ ++||.|++ ++|+ ||+|++|
T Consensus 210 -~~G~~~te~el~~~~~~~~~~~~~~~g~~~ga~~~~~~~~~~~f~~iv~~g~n~~~~~H~~~~~---~~l~-gd~v~iD 284 (444)
T 3cb6_A 210 -DQGKKITHSKFSDQMESLIDNEAFFQTKSLKLGDIDLDQLEWCYTPIIQSGGSYDLKPSAITDD---RNLH-GDVVLCS 284 (444)
T ss_dssp -HHTCCCBHHHHHHHHHGGGGCHHHHTCGGGCCTTCCGGGEEESSCCEEECTTCCCCSTTCCCCS---SBCC-SSEEEEE
T ss_pred -ccccccCHHHHHHHHHHHHHHhccccccccccccccccccccccCceEeccCCcCceeccCCCC---Cccc-CCEEEEE
Confidence 356 99999999999865321 12 2 2578999999999999 99999975 8898 9999999
Q ss_pred ecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcC--C--CCcccccccc
Q 006890 427 SGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYG--L--DYRHGTGHGV 502 (627)
Q Consensus 427 ~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G--~--~~~h~~GHgv 502 (627)
+|++|+||++|+||||++| |+++|+++|+.|++++.+++++++| |+++++|+.++++++++.| + +|.|++||||
T Consensus 285 ~g~~~~gy~sD~tRT~~v~-~~~~~~~~y~~v~~a~~~~~~~~~p-G~~~~~v~~~~~~~~~~~~~g~~~~~~h~~GHgi 362 (444)
T 3cb6_A 285 LGFRYKSYCSNVGRTYLFD-PDSEQQKNYSFLVALQKKLFEYCRD-GAVIGDIYTKILGLIRAKRPDLEPNFVRNLGAGI 362 (444)
T ss_dssp ECEEETTEECCEEEEEEES-CCHHHHHHHHHHHHHHHHHHHHCST-TCBHHHHHHHHHHHHHHHCGGGGGGBCSCCEEEC
T ss_pred EeEeeCCEeeeeeEEEEec-CCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHhhhhhhHhhccccccccc
Confidence 9999999999999999998 8999999999999999999999997 9999999999999999984 5 5899999999
Q ss_pred cccCccccCCCcCCCCCCCCcccCCcEEeeCceee-e---------cCccEEEEeEeeEEecCCcccccCCcceeeeecc
Q 006890 503 GSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYY-E---------DGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHI 572 (627)
Q Consensus 503 G~~l~vhE~P~~~~~~~~~~~l~~Gmv~siEPg~y-~---------~~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~l 572 (627)
| |++||.|..++.+ ++.+|+||||||+|||+| . ++.+||||||+|+||++|+ |+|
T Consensus 363 G--l~~he~p~~~~~~-~~~~l~~Gmv~tiEPgiy~~~~~~~~~~~~~~~gvriEd~v~vt~~g~------------e~L 427 (444)
T 3cb6_A 363 G--IEFRESSLLVNAK-NPRVLQAGMTLNLSIGFGNLINPHPKNSQSKEYALLLIDTIQITRSDP------------IVF 427 (444)
T ss_dssp S--SSSCBGGGCCSTT-CCCBCCTTCEEEEEEEEEEEECSSCCTTSCSEEEEEEEEEEECCSSSC------------EET
T ss_pred C--ccccCCccccCCC-CCcccCCCCEEEEEeccccccCcccccccCCceEEEEEEEEEECCCCc------------eec
Confidence 9 9999998655554 788999999999999999 5 7889999999999999986 999
Q ss_pred cccccccccccccC
Q 006890 573 TWAPYQIKMINLKS 586 (627)
Q Consensus 573 T~~p~~~~~i~~~~ 586 (627)
|.+|++...|+..|
T Consensus 428 t~~p~~l~~Ie~~~ 441 (444)
T 3cb6_A 428 TDSPKAQGDISYFF 441 (444)
T ss_dssp TCCCCSHHHHEECC
T ss_pred ccCCCcHHHHHhhh
Confidence 99999999888766
No 12
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114}
Probab=100.00 E-value=7e-59 Score=506.73 Aligned_cols=369 Identities=16% Similarity=0.127 Sum_probs=295.7
Q ss_pred cCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCC--CCCCcceeEEEEEECCceEEEEeCCCCCHHHHHhhh
Q 006890 164 AGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTD--VPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFLK 241 (627)
Q Consensus 164 ~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d--~~~~P~~~a~~lv~~~~~~L~v~~~~~~~~~~~~l~ 241 (627)
....+.+|++++|+.|+++++|++++++++|++||||++|.+ .+++|. ++++|+.++..++++.+.... +....
T Consensus 75 ~~~~~~~Rl~rlr~~m~~~glDalli~~~~ni~YlTGf~g~~~~~~~~~~--~~llV~~dg~~~l~d~r~~~~-l~~~~- 150 (470)
T 4b28_A 75 LAAMRRFRHRRLTDHVVARGYAGLLMFDPLNIRYATDSTNMQLWNTHNPF--RATLLCADGYMVMWDYKNSPF-LSEFN- 150 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSEEEECSHHHHHHHHCCCSSHHHHHHSCC--CEEEEETTSCEEEECCTTCGG-GGTTC-
T ss_pred hHHHHHHHHHHHHHHHHHcCCCEEEEcCCCcceeecCCCCCcccccCCCC--EEEEEECCCCEEEEecchhhh-hhhhh-
Confidence 345677899999999999999999999999999999999864 344453 688898877777777654321 11110
Q ss_pred hCCeEEeeCCch---------h----HHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcCC--CeEEecCCccch
Q 006890 242 ESGVEVRDYDAV---------S----SDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNS--DKVLLQQSPLAL 306 (627)
Q Consensus 242 ~~~v~v~~y~~~---------~----~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~~--~~~~~~~~~i~~ 306 (627)
..--++.++..+ . .+...++ +.+.+++ ...++|++|.. ++..+..|.+ .+++++++++..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~l~~~~--~~~~~igve~~--~~~~~~~L~~~~~~~vd~~~~v~~ 225 (470)
T 4b28_A 151 PLVREQRAGADLFYFDRGDKVDVAADVFANEVR-ILLRDHA--PGLRRLAVDKV--MLHGLRALQAQGFEIMDGEEVTEK 225 (470)
T ss_dssp TTSCEEECCCCCSHHHHGGGHHHHHHHHHHHHH-HHHHHHS--TTCCEEEESSC--CHHHHHHHHHTTCEEEEHHHHHHH
T ss_pred hHHHHHHhcCCeeeeccCccccccchhHHHHHH-HHHHHhC--ccCceeeeCcc--hHHHHHHHHcCCCEEEEcHHHHHH
Confidence 111233332110 0 0111111 1111111 13679999975 5666777753 589999999999
Q ss_pred hhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcC
Q 006890 307 AKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEH 386 (627)
Q Consensus 307 ~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g 386 (627)
+|+|||++||+.||+|+++++.|+..+++++++.+. ..++||.|+++.++.++.+ .|
T Consensus 226 lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~~----------------------~~~~tE~el~~~l~~~~~~-~G 282 (470)
T 4b28_A 226 ARSVKGPDEIRAMRCASHACEVAVRKMEDFARSKVG----------------------DGVTCENDIWAILHSENVR-RG 282 (470)
T ss_dssp HHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT----------------------SSCCBHHHHHHHHHHHHHT-TT
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC----------------------CCCCCHHHHHHHHHHHHHH-cC
Confidence 999999999999999999999999999999855431 1234999999999987644 34
Q ss_pred CCCCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecce-ecCcccceEEEEecC--CCCHHHHHHHHHHHHHHH
Q 006890 387 FRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQ-YQDGTTDITRTFHFG--KPSAHEKACYTAVLKGHI 463 (627)
Q Consensus 387 ~~~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~-y~gy~~D~tRT~~~G--~p~~e~~~~y~~v~~~~~ 463 (627)
. ..+|.+|+++|+|++.+||.|++ ++|++||+|++|+|++ |.||++|+||||++| +|+++|+++|+.|++++.
T Consensus 283 ~-~~~~~~ivasG~n~~~~H~~~~~---~~l~~Gd~vliD~G~~g~~GY~sDitRT~~vG~~~~s~~~~~~y~~v~~a~~ 358 (470)
T 4b28_A 283 G-EWIETRLLASGPRSNPWFQECGP---RVCQRNEIISFDTDLVGAYGICTDISRSWWIGDQKPRADMIYAMQHGVEHIR 358 (470)
T ss_dssp C-CEESCCCEEEGGGGSSTTCCCCS---CBCCSSEEEEEECCEECGGGCEECCEEEEEESSSCCCHHHHHHHHHHHHHHH
T ss_pred C-CcCCCceeEEcCccccCCCCCCC---ccccCCCEEEEEecccccCeEEEeeEEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 3 35788999999999999999875 8999999999999998 899999999999999 699999999999999999
Q ss_pred HHHhccCCCCcccchHHHHHHHHHHHcCCCCcccccccccccCccccCCCcCCC-----CCCCCcccCCcEEeeCceeee
Q 006890 464 ALGNAVFPNGTCGHTLDILARLPLWKYGLDYRHGTGHGVGSYLNVHEGPQSISF-----KPRNVPIHASMTATDEPGYYE 538 (627)
Q Consensus 464 ~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~~~h~~GHgvG~~l~vhE~P~~~~~-----~~~~~~l~~Gmv~siEPg~y~ 538 (627)
+++++++| |+++++|+.++++++++.|..+.|++||||| + +||+|.+... ..++.+|+||||||+|||+|.
T Consensus 359 a~i~~ikp-G~~~~di~~~ar~~i~~~~~~~~~~~GHGIG--l-~HE~P~i~~~~~~~~~~~~~~L~~GMV~tiEPgiy~ 434 (470)
T 4b28_A 359 TNMEMLKP-GVMIPELSANTHVLDAKFQKQKYGCLMHGVG--L-CDEWPLVAYPDHAVAGAYDYPLEPGMTLCVEALISE 434 (470)
T ss_dssp HHHHTCCT-TCBHHHHHHTCCCCCHHHHTTCCSCSEEEES--S-SEEEEEECCTTTCCTTSSCCBCCTTCEEEEEEEEEC
T ss_pred HHHHHccC-CCCHHHHHHHHHHHHHHhhhcCCCCccCCCC--c-CCCCCcccCccccccCCCCCEECCCCEEEEcCeeec
Confidence 99999998 9999999999999999988877799999999 8 6999976431 115789999999999999998
Q ss_pred -cCccEEEEeEeeEEecCCcccccCCcceeeeecccccccccccccc
Q 006890 539 -DGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMINL 584 (627)
Q Consensus 539 -~~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~~p~~~~~i~~ 584 (627)
+|.+||||||+|+||++|+ |+||.+|+++.+|.+
T Consensus 435 ~~g~~GvriEd~vlVte~G~------------e~LT~~p~~l~li~~ 469 (470)
T 4b28_A 435 EGGDFSIKLEDQVLITEDGY------------ENLTKYPFDPALMGV 469 (470)
T ss_dssp TTCSCEEEEEEEEEECSSSE------------EECCCCCCCHHHHC-
T ss_pred CCCcEEEEEeeEEEEeCCcC------------eECCCCCCcHHhccC
Confidence 8999999999999999985 999999999988854
No 13
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...
Probab=100.00 E-value=6.7e-58 Score=498.54 Aligned_cols=354 Identities=21% Similarity=0.293 Sum_probs=289.7
Q ss_pred cCCcHHHHHHHHHHHhhccCCcEEEEecC---------------CccceEEccccCCCCCCcceeEEEEEEC-----Cce
Q 006890 164 AGSSVVEKLKELREKLTNEKARGIIITTL---------------DEVAWLYNIRGTDVPYCPVVHAFAIVTT-----NAA 223 (627)
Q Consensus 164 ~G~~~~~ri~~lr~~m~~~~~d~lll~~~---------------dni~wLtg~rg~d~~~~P~~~a~~lv~~-----~~~ 223 (627)
+..++.+|++++++.|++.+ ++++++++ .|+.||||+... .++++++. +++
T Consensus 4 ~~~e~~~R~~~l~~~m~~~~-~~ll~~~~~~~r~~D~~y~frq~~n~~YltG~~~~--------~~~lvi~~~~~~~~~~ 74 (440)
T 2v3z_A 4 SRQEFQRRRQALVEQMQPGS-AALIFAAPEVTRSADSEYPYRQNSDFWYFTGFNEP--------EAVLVLIKSDDTHNHS 74 (440)
T ss_dssp CHHHHHHHHHHHHHHSCSSE-EEEEECCCCCEEETTEECCCCCCHHHHHHHCCCCS--------SCEEEEEECSSSCEEE
T ss_pred CHHHHHHHHHHHHHhcccCC-EEEEECCCccccCCCCCCcccCCCCEEEecCCCCC--------CEEEEEEecCCCCceE
Confidence 45678999999999999877 78888876 577888877532 36777764 468
Q ss_pred EEEEeCCCCCHHH--------HHhhhhCCe-EEeeCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCc------HHH
Q 006890 224 FLYVDKRKVSSEV--------ISFLKESGV-EVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCS------YAL 288 (627)
Q Consensus 224 ~L~v~~~~~~~~~--------~~~l~~~~v-~v~~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~------~~~ 288 (627)
+||++..+...++ +......++ .+.+++++.+.+..+.. ..++|+++.+..+ ...
T Consensus 75 ~Lf~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----------~~~~i~~~~~~~~~~~~~~~~~ 144 (440)
T 2v3z_A 75 VLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALAFSEINQQLYQLLN----------GLDVVYHAQGEYAYADVIVNSA 144 (440)
T ss_dssp EEEECCCCHHHHHHHCCCCHHHHHHHHHTCSEEEEGGGHHHHHHHHHT----------TCSEEECCTTSCHHHHHHHHHH
T ss_pred EEEecCCCcccceecCCCCCHHHHHHhcCCCEEeeHHHHHHHHHHHHc----------CCCEEEEeCCcccchhHHHHHH
Confidence 9999987644322 111111233 45677777666655532 2458898876422 112
Q ss_pred Hhhc---------CCCeEEecCCccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccc
Q 006890 289 YSKL---------NSDKVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKE 359 (627)
Q Consensus 289 ~~~l---------~~~~~~~~~~~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 359 (627)
+..+ +..++++..+++..+|+|||++||+.||+|+++++.|+.++++++
T Consensus 145 ~~~l~~~~~~~~~~~~~~~~~~~~i~~~R~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i---------------------- 202 (440)
T 2v3z_A 145 LEKLRKGSRQNLTAPATMIDWRPVVHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKC---------------------- 202 (440)
T ss_dssp HHHHHTCGGGTCCCCSEEECCHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHC----------------------
T ss_pred HHHHhhhcccccCCcceeeeHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhc----------------------
Confidence 2222 234788888999999999999999999999999999999998875
Q ss_pred cccCCCCCcCHHHHHHHHHHHHHhhcCCCCCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceE
Q 006890 360 KKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDIT 439 (627)
Q Consensus 360 ~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~t 439 (627)
++|+||.++++.++.... ..|+.+.+|++|+++|+|++++||.|++ ++|++||+|++|+|++|.||++|+|
T Consensus 203 -----~~G~tE~el~~~~~~~~~-~~G~~~~~f~~iv~~G~n~~~~H~~~~~---~~l~~gd~vliD~G~~~~gy~sD~t 273 (440)
T 2v3z_A 203 -----RPGMFEYHLEGEIHHEFN-RHGARYPSYNTIVGSGENGCILHYTENE---CEMRDGDLVLIDAGCEYKGYAGDIT 273 (440)
T ss_dssp -----CTTCBHHHHHHHHHHHHH-HTTCCEESSCCEEEEGGGGGSTTCCCCC---SBCCTTCEEEEEECEEETTEECCEE
T ss_pred -----cCCCcHHHHHHHHHHHHH-HcCCCcCCCCCeEEEcCccccccCCCCC---ccccCCCEEEEEeeEEECCEEEeeE
Confidence 789999999999977653 4577788999999999999999999875 8999999999999999999999999
Q ss_pred EEEec-CCCCHHHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHH----HcCC----------------CCcccc
Q 006890 440 RTFHF-GKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLW----KYGL----------------DYRHGT 498 (627)
Q Consensus 440 RT~~~-G~p~~e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~----~~G~----------------~~~h~~ 498 (627)
|||++ |+|+++|+++|+.|++++.+++++++| |+++.+|+.++++.+. +.|+ .|.|++
T Consensus 274 RT~~v~G~~~~~~~~~y~~v~~a~~~~i~~~~p-G~~~~~v~~~~~~~~~~~l~~~G~~~g~~~~~~~~~~~~~~~~Hg~ 352 (440)
T 2v3z_A 274 RTFPVNGKFTQAQREIYDIVLESLETSLRLYRP-GTSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHGL 352 (440)
T ss_dssp EEEETTSCCCHHHHHHHHHHHHHHHHHHHHCCT-TCCHHHHHHHHHHHHHHHHHHHTSSCSCHHHHHHTTTTTTTCCSCS
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHhhhhccCcccCchhhhhhhhccccccCCCC
Confidence 99999 999999999999999999999999998 9999999999988874 3443 479999
Q ss_pred cccccccCccccCCCcCCCCCCCCcccCCcEEeeCceeeecC---------ccEEEEeEeeEEecCCcccccCCcceeee
Q 006890 499 GHGVGSYLNVHEGPQSISFKPRNVPIHASMTATDEPGYYEDG---------NFGIRLENVLVVTDANTKFNFGDKGYLSF 569 (627)
Q Consensus 499 GHgvG~~l~vhE~P~~~~~~~~~~~l~~Gmv~siEPg~y~~~---------~~GvriEd~v~V~~~g~~~~~~~~~~~~f 569 (627)
||||| |++||.|.+... ++.+|+||||||+|||+|.++ .+||||||+|+||++|+
T Consensus 353 GHgiG--l~~he~p~~~~~--~~~~L~~Gmv~tiEPgiy~~~~~~~~~~~~~~GvriEd~vlVt~~G~------------ 416 (440)
T 2v3z_A 353 SHWLG--LDVHDVGVYGQD--RSRILEPGMVLTVAPGLYIAPDAEVPEQYRGIGIRIEDDIVITETGN------------ 416 (440)
T ss_dssp CCBCS--SSSSCCSCCCGG--GCCCCCTTCEEEECCEEEECTTCSSCGGGTTEEEECBEEEEEETTEE------------
T ss_pred CCcCC--cccccCCCcCCC--CCCccCCCCEEEECCEEEeCCccccccccceeEEEEeeEEEECCCcC------------
Confidence 99999 999999987433 568999999999999999997 68999999999999985
Q ss_pred eccc-ccccccccccc
Q 006890 570 EHIT-WAPYQIKMINL 584 (627)
Q Consensus 570 e~lT-~~p~~~~~i~~ 584 (627)
|+|| .+|++...|+.
T Consensus 417 e~LT~~~p~~~~~Ie~ 432 (440)
T 2v3z_A 417 ENLTASVVKKPEEIEA 432 (440)
T ss_dssp EESSTTSCCSHHHHHH
T ss_pred eECCcccCCCHHHHHH
Confidence 9999 59998766643
No 14
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis}
Probab=100.00 E-value=5.7e-56 Score=478.65 Aligned_cols=363 Identities=20% Similarity=0.247 Sum_probs=292.2
Q ss_pred CcHHHHHHHHHHHhhccCC-------------cEEE-EecCCccceEEccccCCCCCCcceeEEEEEEC----CceEEEE
Q 006890 166 SSVVEKLKELREKLTNEKA-------------RGII-ITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTT----NAAFLYV 227 (627)
Q Consensus 166 ~~~~~ri~~lr~~m~~~~~-------------d~ll-l~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~----~~~~L~v 227 (627)
..+.+|.++|.+.|...++ |... .....|+.||||+.+.+ +++++.. ++.+||+
T Consensus 4 ~~~~~RR~~l~~~l~~~~~~i~~~~~~~~~~~d~~~~frq~s~f~YltG~~~~~--------~~~v~~~~~~~~~~~lfv 75 (427)
T 3ig4_A 4 KFFAQNRERLVNTLPDESITILFAGQAPHMSADAHYKFVPNRNFYYVTGIDEPN--------VIFMLKKFGNSVEETLFI 75 (427)
T ss_dssp HHHHHHHHHHHTTSCSSEEEEEECCCCCEEETTEECCCCCCHHHHHHHCCCSTT--------CEEEEEEETTEEEEEEEE
T ss_pred HHHHHHHHHHHHhCcCCCEEEEECCCccccCCCCCCcccCCCCeEEeeCCCCCC--------EEEEEEccCCCceEEEEe
Confidence 3578999999999975433 2211 22234689999998776 5677643 2578999
Q ss_pred eCCCCCHH--------HHHhhhhCCe-EEeeCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCC--------CcHHHHh
Q 006890 228 DKRKVSSE--------VISFLKESGV-EVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNS--------CSYALYS 290 (627)
Q Consensus 228 ~~~~~~~~--------~~~~l~~~~v-~v~~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~--------~~~~~~~ 290 (627)
++.....+ .+......++ .+.+.+++.+.+..+..+ .+.++|+++.+. .++..++
T Consensus 76 ~~~~~~~~~w~g~r~~~~~a~~~~~~~~v~~~~~~~~~l~~~~~~--------~~~~~i~~~~~~~~~~~~~~~~~~~~~ 147 (427)
T 3ig4_A 76 EKSDPVMEKWVGKTVSNEEAEKISGIKKVIYLDSFEKTMSNIFFT--------ENVKHLYLDLECREWKGTETKTLAFAK 147 (427)
T ss_dssp CCCCTTGGGTTCCCCCHHHHHHHHCCSEEEEGGGHHHHHHHHHTT--------TCCCEEEECCCCCCTTCCCCHHHHHHH
T ss_pred cCCCccceEEeCCCCcHHHHHhcCCCCEEEEhhhHHHHHHHHHhc--------CCCcEEEEeCCccccccccccCHHHHH
Confidence 87332111 1111122345 355666666666555421 135688888642 2334443
Q ss_pred ----hcCCCeEEecCCccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCC
Q 006890 291 ----KLNSDKVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTV 366 (627)
Q Consensus 291 ----~l~~~~~~~~~~~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (627)
.++..++++.+..+..+|+|||++||+.||+|+++++.|+.++++.+ ++
T Consensus 148 ~l~~~~~~~~~~~~~~~i~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i---------------------------~p 200 (427)
T 3ig4_A 148 HVREQYPHVTIGNVYPNICELRVFKTDEEIEIIKEAIAVTKDGIYNVLKHA---------------------------KA 200 (427)
T ss_dssp HHHHHCTTCEEEECHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------CS
T ss_pred HHHhhCCCCeEeEhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHc---------------------------cC
Confidence 45566899999999999999999999999999999999999888764 79
Q ss_pred CcCHHHHHHHHHHHHHhhcCCCCCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEec-C
Q 006890 367 KLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHF-G 445 (627)
Q Consensus 367 g~tE~ei~~~l~~~~~~~~g~~~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~-G 445 (627)
|+||.|+++.++.... ..|..+++|++|+++|+|++++||.|++ ++|++||+|++|+|++|+||++|+||||++ |
T Consensus 201 G~tE~el~~~~~~~~~-~~G~~~~~f~~ivasG~n~~~~H~~~~~---~~l~~GdlvliD~G~~~~gY~sDitRT~~v~G 276 (427)
T 3ig4_A 201 DMMEYELEAQFDFTLK-SSGIKHHAFNTILASGKNATVLHYEDND---AQIQNGDLVLLDLGAQKDYYNADISYTFPANG 276 (427)
T ss_dssp SEEHHHHHHHHHHHHH-HTTCCEESSCCEEEEGGGGGSTTCCCCC---SEECTTCEEEEEECEEETTEECCEEEEEETTS
T ss_pred CCCHHHHHHHHHHHHH-HcCCCCCCCCCEEEECccccccccCccc---ccCCCCCEEEEEeeeEECcEEEEEEEEEecCC
Confidence 9999999999987663 4577788999999999999999999876 899999999999999999999999999999 8
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHc----CC---------CCcccccccccccCccccCC
Q 006890 446 KPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKY----GL---------DYRHGTGHGVGSYLNVHEGP 512 (627)
Q Consensus 446 ~p~~e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~----G~---------~~~h~~GHgvG~~l~vhE~P 512 (627)
++|++|+++|+.|++++.+++++++| |+++.+|+.++++++++. |+ .|.|++||||| |++||.|
T Consensus 277 ~~s~~~~~~y~~vl~a~~~~i~~~kp-G~~~~di~~~a~~~i~~~~~~~G~~~~~~~~~~~~~Hg~GH~iG--l~vhe~~ 353 (427)
T 3ig4_A 277 TFSSRQKQIYNIVLNALKETTEIIKP-GLKFAALNEHAKKVLAEGCKAVGLIQEDEELSKYYYHGVSHFLG--LDTHDVG 353 (427)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTCCT-TCBTHHHHHHHHHHHHHHHHHHTSCSSGGGGGGTCCSCSCCBCS--SSSSCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHccC-CCcHHHHHHHHHHHHHHhHhhcCCccCcchhhccCCCCCCCcCC--cCCCcCC
Confidence 99999999999999999999999998 999999999999999886 32 58999999999 9999987
Q ss_pred CcCCCCCCCCcccCCcEEeeCceeeecCcc-EEEEeEeeEEecCCcccccCCcceeeeecccc-cccccccccccCCCHH
Q 006890 513 QSISFKPRNVPIHASMTATDEPGYYEDGNF-GIRLENVLVVTDANTKFNFGDKGYLSFEHITW-APYQIKMINLKSLTPE 590 (627)
Q Consensus 513 ~~~~~~~~~~~l~~Gmv~siEPg~y~~~~~-GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~-~p~~~~~i~~~~l~~~ 590 (627)
. . .+.+|+||||||||||+|.++.+ ||||||+|+||++|+ |+||. +|.+.+.|+.-| ...
T Consensus 354 ~----~-~~~~L~~GMV~tiEPgiy~~~~g~GvriEd~vlVt~~G~------------e~LT~~~pk~~~~IE~~m-~~~ 415 (427)
T 3ig4_A 354 T----Y-KDRVLEEGMVITIEPGLYIEEESIGIRIEDDILVTKDGH------------ENLSKDIIREVEEIEEFM-REN 415 (427)
T ss_dssp C----C-TTCBCCTTCEEEECCEEEEGGGTEEEECBEEEEECSSSE------------EETTTTSCCSHHHHHHHH-HHH
T ss_pred C----C-CCCEeCCCCEEEECCEEEECCCceEEEEeeEEEEeCCcC------------eECCCCCCCCHHHHHHHH-ccC
Confidence 5 2 67899999999999999998864 999999999999997 99996 899999998654 689
Q ss_pred HHHHHH
Q 006890 591 EIDWLN 596 (627)
Q Consensus 591 e~~~ln 596 (627)
|+.|||
T Consensus 416 ~~~~~~ 421 (427)
T 3ig4_A 416 NVNVKQ 421 (427)
T ss_dssp CTTC--
T ss_pred cccccc
Confidence 999999
No 15
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A
Probab=100.00 E-value=1.3e-52 Score=462.36 Aligned_cols=360 Identities=23% Similarity=0.345 Sum_probs=273.1
Q ss_pred cccCCcHHHHHHHHHHHhhccCC----cEEEEecCC-----------------ccceEEccccCCCCCCcceeEEEEEE-
Q 006890 162 EFAGSSVVEKLKELREKLTNEKA----RGIIITTLD-----------------EVAWLYNIRGTDVPYCPVVHAFAIVT- 219 (627)
Q Consensus 162 ~~~G~~~~~ri~~lr~~m~~~~~----d~lll~~~d-----------------ni~wLtg~rg~d~~~~P~~~a~~lv~- 219 (627)
.++-.++.+|+++|++.|++.+. +++++.+.. |+.||||++..+ +++++.
T Consensus 18 ~i~~~e~~~Rr~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~~d~~y~frq~s~f~YLtG~~~p~--------~~~vi~~ 89 (494)
T 2iw2_A 18 KVPLALFALNRQRLCERLRKNPAVQAGSIVVLQGGEETQRYCTDTGVLFRQESFFHWAFGVTEPG--------CYGVIDV 89 (494)
T ss_dssp CEETHHHHHHHHHHHHHHHHCTTCCTTCEEEEECCCCEESTTSCCEECCCCCHHHHHHHCCCSSS--------CEEEEET
T ss_pred CCCHHHHHHHHHHHHHHHHhhhcccCceEEEEeCCcceeecCCCCCCCccCCcceeeecCCCCCC--------eEEEEEc
Confidence 46678899999999999987743 588885432 578999987554 566774
Q ss_pred -CCceEEEEeCCCCCHHHHHhh----------hhCCe-EEeeCCchhHHHHHHhhccCCCCCCCCCCCEEEE----cCCC
Q 006890 220 -TNAAFLYVDKRKVSSEVISFL----------KESGV-EVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWA----DPNS 283 (627)
Q Consensus 220 -~~~~~L~v~~~~~~~~~~~~l----------~~~~v-~v~~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~i----D~~~ 283 (627)
.++++||++..+...+ .+. ...++ .+.+++.+.+.+... +.+++++ +...
T Consensus 90 ~~~~~~L~~~~~~~~~~--~w~g~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~------------~~~~i~~~~g~~~~~ 155 (494)
T 2iw2_A 90 DTGKSTLFVPRLPASHA--TWMGKIHSKEHFKEKYAVDDVQYVDEIASVLTSQ------------KPSVLLTLRGVNTDS 155 (494)
T ss_dssp TTCCEEEEECCCCGGGT--TTTCCCCCHHHHHHHHTCSEEEEGGGHHHHHHHT------------CCSCEECCCCBCTTT
T ss_pred cCCeEEEEECCCCHHHh--hhcCCCCCHHHHHHHhCCcccccHHHHHHHHHhc------------CCCeEEEecCccccc
Confidence 4789999987654321 111 00111 123344443333322 1223433 2110
Q ss_pred ---CcHHHHhhcCC--CeEEecCCccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccc
Q 006890 284 ---CSYALYSKLNS--DKVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATK 358 (627)
Q Consensus 284 ---~~~~~~~~l~~--~~~~~~~~~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 358 (627)
.....+..+.. ...++....+..+|+|||++||+.||+|+++++.++.++++++
T Consensus 156 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~~R~iKs~~EI~~mr~A~~i~~~a~~~~~~~i--------------------- 214 (494)
T 2iw2_A 156 GSVCREASFDGISKFEVNNTILHPEIVECRVFKTDMELEVLRYTNKISSEAHREVMKAV--------------------- 214 (494)
T ss_dssp CCBCCCCCCTTGGGSCEECSSHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHC---------------------
T ss_pred cccccHhhhhhhhhccccchhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHc---------------------
Confidence 00000111111 1233444678999999999999999999999999999888864
Q ss_pred ccccCCCCCcCHHHHHHHHHHHHHhhcCCCCCcCCcccccCCCcccccccCC-CCccCCCCCCCeEEEeecceecCcccc
Q 006890 359 EKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFPTISSVGPNAAIMHYSPQ-SETCAEMDPNSIYLCDSGAQYQDGTTD 437 (627)
Q Consensus 359 ~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~f~~i~~~G~n~a~~h~~~~-~~~~~~l~~gd~vliD~g~~y~gy~~D 437 (627)
++|+||.++++.++....+..|+.+.+|++|+++|+|++++||.++ ..++++|++||+|++|+|++|.||++|
T Consensus 215 ------~~G~tE~el~~~~~~~~~~~~G~~~~~~~~iv~sG~n~~~~Hy~~~g~p~~~~l~~Gd~vliD~G~~~~gY~sD 288 (494)
T 2iw2_A 215 ------KVGMKEYELESLFEHYCYSRGGMRHSSYTCICGSGENSAVLHYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASD 288 (494)
T ss_dssp ------CTTCBHHHHHHHHHHHHHHHHCCCEESSCCEEEEGGGGGCSSCSSTTSCSCCBCCTTCEEEEEECEEBTTBCCC
T ss_pred ------cCCCcHHHHHHHHHHHHHHhCCCCcCCCCceEEEcCccccccccccCCCCCCccCCCCEEEEEeeEEECCEEEE
Confidence 7899999999999876644447778899999999999999999764 223589999999999999999999999
Q ss_pred eEEEEec-CCCCHHHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHH----cCC----------------CCcc
Q 006890 438 ITRTFHF-GKPSAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWK----YGL----------------DYRH 496 (627)
Q Consensus 438 ~tRT~~~-G~p~~e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~----~G~----------------~~~h 496 (627)
+||||++ |++|++|+++|+.|++++.+++++++| |+++.+|+.++++++++ .|+ .|+|
T Consensus 289 itRT~~v~G~~s~~q~~~y~~v~~a~~~~i~~~kp-G~~~~di~~~a~~~i~~~l~~~G~~~g~~~~~~~~g~~~~~~~H 367 (494)
T 2iw2_A 289 ITCSFPANGKFTADQKAVYEAVLRSSRAVMGAMKP-GVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQAHLGAVFMPH 367 (494)
T ss_dssp EEEEEETTSCCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHHHHHTTSBCSCHHHHHHTTTHHHHCCS
T ss_pred eeEEEEECCcCCHHHHHHHHHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHHHHHcCCccccHHHHHhcccccccCCC
Confidence 9999999 899999999999999999999999998 99999999999988764 343 3789
Q ss_pred cccccccccCccccCCCcC------------CCCCCCCcccCCcEEeeCceeeec-------------------------
Q 006890 497 GTGHGVGSYLNVHEGPQSI------------SFKPRNVPIHASMTATDEPGYYED------------------------- 539 (627)
Q Consensus 497 ~~GHgvG~~l~vhE~P~~~------------~~~~~~~~l~~Gmv~siEPg~y~~------------------------- 539 (627)
++||||| |++||.|... +.+ ++.+|+||||||||||+|.+
T Consensus 368 ~~GHgiG--l~vHd~~~~~~~~~~~~~p~~~~~~-~~~~L~~GMV~tiEPGiy~~~~~~~~~~~d~~~~~~~~~~~~~~~ 444 (494)
T 2iw2_A 368 GLGHFLG--IDVHDVGGYPEGVERIDEPGLRSLR-TARHLQPGMVLTVEPGIYFIDHLLDEALADPARASFFNREVLQRF 444 (494)
T ss_dssp CSCCBCS--SSSSCSCSSCTTCCCCCSTTGGGCS-CCCBCCTTCEEEECCEEECCHHHHHHHHHCHHHHTTBCHHHHHHH
T ss_pred CCcCCCC--cccccCCCcccccccccccccccCC-CCCEeCCCCEEEECCccccccccchhhccccccccccccchhhhh
Confidence 9999999 9999943210 111 46799999999999999974
Q ss_pred -CccEEEEeEeeEEecCCcccccCCcceeeeecccccccccccccccC
Q 006890 540 -GNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMINLKS 586 (627)
Q Consensus 540 -~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~~p~~~~~i~~~~ 586 (627)
|.+||||||+|+||++|+ |+||.+|.+...|+..|
T Consensus 445 ~g~gGvRiED~vlVte~G~------------e~LT~~p~~~~~ie~~m 480 (494)
T 2iw2_A 445 RGFGGVRIEEDVVVTDSGI------------ELLTCVPRTVEEIEACM 480 (494)
T ss_dssp TTCCEEECBEEEEECSSSE------------EECCCCCCSHHHHHHHH
T ss_pred CCCCEEEeeeEEEEcCCcC------------eECCCCCCcHHHHHHHH
Confidence 678999999999999996 99999999887776555
No 16
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii}
Probab=100.00 E-value=9.5e-52 Score=448.28 Aligned_cols=351 Identities=20% Similarity=0.224 Sum_probs=263.6
Q ss_pred HHHHHHHHHHhhccCCcEEEEecCCccceEEc-----cccCC-C-CCCcc---eeEEEEEE-CCceEEEEeCCC-C----
Q 006890 169 VEKLKELREKLTNEKARGIIITTLDEVAWLYN-----IRGTD-V-PYCPV---VHAFAIVT-TNAAFLYVDKRK-V---- 232 (627)
Q Consensus 169 ~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg-----~rg~d-~-~~~P~---~~a~~lv~-~~~~~L~v~~~~-~---- 232 (627)
+.+.+|+++.|++.+.|++++.+..++.|++| ||... . .++++ --+++++. .+++.||+.... .
T Consensus 13 ~~~~~r~~~~l~~~~~~~~~i~~~~~~~~~~~D~~~~frq~~~f~yl~g~~e~p~~~L~~~~~~~~~l~~~~~~d~w~~~ 92 (451)
T 3rva_A 13 EELQARTREALQREGLDGLVIHSGQGKRLFLDDNHYPFKVNPQFKAWVPVIDNPNCWLVVNGVDKPTLIFYRPEDFWHKV 92 (451)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCCCCBCTTSSCBCCCCCCHHHHTTCSCCSCSSCEEEECSSSCCEEEEECCCCTTSCC
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCCceEEecCCCCCCcccCCCceEEeccCCCCCEEEEEecCCCeEEEeeccHHhhhcc
Confidence 45678899999999999999999999999987 44321 0 01111 12677775 346677766431 0
Q ss_pred CHHHHHh-hhhCCeEEeeCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcCCCeEEecCCccchhhhcC
Q 006890 233 SSEVISF-LKESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNSDKVLLQQSPLALAKAIK 311 (627)
Q Consensus 233 ~~~~~~~-l~~~~v~v~~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~~~~~~~~~~~i~~~r~iK 311 (627)
.....+. ... ..+..+....+ +. ..+.. ...++.+.......+.+..+....+++..+.+..+|+||
T Consensus 93 ~~~~~~~~~~~--~~v~~~~~~~~----~~-~~l~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~lR~iK 160 (451)
T 3rva_A 93 PPEPNDFWTDS--FDIKLLQQADA----VE-KFLPY-----DKSRFAYVGEYIEVAKALGFDNVNPDRVLHYLHYQRAYK 160 (451)
T ss_dssp CCSCCSTTGGG--SEEEEESSGGG----GG-GGSCS-----CGGGEEEESSCHHHHHHHTCSCBSCHHHHHHHHHHHTSC
T ss_pred ccCcchhHHhc--cCeEEEecHHH----HH-HHHhh-----ccCceEEEccCcCHHHhhhhcccCchHHHHHHHHHHhcC
Confidence 0000000 111 23333322211 11 11211 112233332223333344444345667778899999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCCCc
Q 006890 312 NPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLS 391 (627)
Q Consensus 312 ~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~ 391 (627)
|++||+.||+|+++++.|+..+++.+ ++|+||.|+++.+.... ..|..+.+
T Consensus 161 s~~EI~~mr~A~~ia~~a~~~~~~~i---------------------------~pG~tE~el~~~~~~~~--~~g~~~~~ 211 (451)
T 3rva_A 161 TDYELDCMREANKLAVAGHKAAEQAF---------------------------REGKSEFDINLAYAAAS--RQGDNDVP 211 (451)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH---------------------------HTTCCHHHHHHHHHHHH--TCCTTTSS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhh---------------------------hcCCCHHHHHHHHHHHH--HcCCCcCC
Confidence 99999999999999999999888876 58999999999876643 34667889
Q ss_pred CCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCC--CHHHHHHHHHHHHHHHHHHhcc
Q 006890 392 FPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKP--SAHEKACYTAVLKGHIALGNAV 469 (627)
Q Consensus 392 f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p--~~e~~~~y~~v~~~~~~~~~~~ 469 (627)
|++|+++|+|++++||.|++. +.+++||+|++|+|++|+||++|+||||++|++ +++++++|+.|++++.++++++
T Consensus 212 f~~IVasG~naa~~H~~~~~~--~~l~~GdlVliD~G~~~~GY~sDiTRT~~vG~~~~~~~~~~ly~~vl~aq~aai~~i 289 (451)
T 3rva_A 212 YTSIVALNEHASILHYMQCDT--VAPKESRSFLIDAGANYHGYAADITRTYAQEGVHNSAMFRDLIQAVDKVTLTLVDSL 289 (451)
T ss_dssp SCCEEEEGGGGGCTTCCCCCS--SCCSSCCEEEEEEEEEETTEEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCcEEEECCcccccCCCCCCC--cccCCCCEEEEEeeEEECCEEEEeEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999861 347899999999999999999999999999987 8899999999999999999999
Q ss_pred CCCCcccchHHHHHHHHHH-----------------HcCC---CCcccccccccccCccccCCCcCCCC-----------
Q 006890 470 FPNGTCGHTLDILARLPLW-----------------KYGL---DYRHGTGHGVGSYLNVHEGPQSISFK----------- 518 (627)
Q Consensus 470 ~p~G~~~~~l~~~a~~~l~-----------------~~G~---~~~h~~GHgvG~~l~vhE~P~~~~~~----------- 518 (627)
+| |+++.+|+.+++++++ +.|+ .|+|++||||| |++||.|.+....
T Consensus 290 kP-G~~~~di~~aa~~~i~~~l~~~G~~~~~~~~~~~~g~~~~~f~H~~GHgiG--ldvHe~p~~~~~~~g~~~~~~~~~ 366 (451)
T 3rva_A 290 KP-GVAYTDIHLLAHDGIAQILHDTGMVNLTPPEIVEMGITRTFFPHGIGHFLG--LQVHDVGGLVNDDRGTPKPAPDDH 366 (451)
T ss_dssp CT-TCBHHHHHHHHHHHHHHHHHHTTSBCSCHHHHHHTTTHHHHCCSCSCCBCS--SSSSCTTTTBSSTTCCBCCCCTTC
T ss_pred CC-CCcHHHHHHHHHHHHHHHHHhcCCccccHHHHHhcCcccccCCCCCccccc--CCcccCcccccccccccccccccc
Confidence 98 9999999999999876 5565 58999999999 9999998764310
Q ss_pred ---CCCCcccCCcEEeeCceeeec-------------------------CccEEEEeEeeEEecCCcccccCCcceeeee
Q 006890 519 ---PRNVPIHASMTATDEPGYYED-------------------------GNFGIRLENVLVVTDANTKFNFGDKGYLSFE 570 (627)
Q Consensus 519 ---~~~~~l~~Gmv~siEPg~y~~-------------------------~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe 570 (627)
.+..+|+||||||||||+|++ |.+||||||+|+||++|+ |
T Consensus 367 ~~l~~~~~L~~GMV~TIEPGiY~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gGvRIED~vlVT~~G~------------e 434 (451)
T 3rva_A 367 PFLRCTRMVEARQVFTIEPGLYFIDSLLRDLKATPASKYINWDTIDAYKPFGGIRIEDNIIVHRDKN------------E 434 (451)
T ss_dssp TTCCCCCBCCTTCEEEECCEEECCHHHHHHHHTSGGGGGBCHHHHHHHGGGCEEECBEEEEECSSCE------------E
T ss_pred ccCCCCCCcCCCCEEEECCEEeEchhhhhhhcccccccccccchhhhcCCCCEEEcccEEEECCCcc------------e
Confidence 145789999999999999983 567999999999999997 8
Q ss_pred ccccccc
Q 006890 571 HITWAPY 577 (627)
Q Consensus 571 ~lT~~p~ 577 (627)
+||..|.
T Consensus 435 ~LT~~~~ 441 (451)
T 3rva_A 435 NMTRDLD 441 (451)
T ss_dssp EHHHHTT
T ss_pred ECCCCCC
Confidence 9997654
No 17
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A*
Probab=100.00 E-value=4.8e-50 Score=438.41 Aligned_cols=351 Identities=19% Similarity=0.190 Sum_probs=260.1
Q ss_pred HHHHHHHHHHhhccCCcEEEEecCCccceEEc-----cccCC-C-CCCcc---eeEEEEEE-CCceEEEEeCC-C-CC--
Q 006890 169 VEKLKELREKLTNEKARGIIITTLDEVAWLYN-----IRGTD-V-PYCPV---VHAFAIVT-TNAAFLYVDKR-K-VS-- 233 (627)
Q Consensus 169 ~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg-----~rg~d-~-~~~P~---~~a~~lv~-~~~~~L~v~~~-~-~~-- 233 (627)
+.+.+|+++.|++.+.|++++.+..++.|++| ||... . .++++ --+++++. .+++.||+... + +.
T Consensus 13 ~~~~~r~~~~l~~~~~~~~~i~~~~~~~~~~~D~~~pFrq~s~F~yl~g~~e~p~~~l~~~~~~~~~l~~~~~~d~w~g~ 92 (517)
T 3l24_A 13 ATLQKRTREIIERENLDGVVFHSGQAKRQFLDDMYYPFKVNPQFKAWLPVIDNPHCWIVANGTDKPKLIFYRPVDFWHKV 92 (517)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCCCBCTTSSCBCCCCCCHHHHTTSSCCSCSSCEEEECSSSCCEEEEECCCCSSSCC
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCCceEEecCCCCCCceecCCceEEeccCCCCCEEEEEecCCCeEEEEecchhhhhcc
Confidence 35678888999999999999999999999887 44331 0 01111 12677775 34667766542 1 00
Q ss_pred -HHHHH-hhhhCCeEEeeCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcCCCeEEecCCccchhhhcC
Q 006890 234 -SEVIS-FLKESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNSDKVLLQQSPLALAKAIK 311 (627)
Q Consensus 234 -~~~~~-~l~~~~v~v~~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~~~~~~~~~~~i~~~r~iK 311 (627)
...++ +... ..+..+....+ +. ..+.. ...++.+.......+.+..+....+++..+.+..+|++|
T Consensus 93 ~~~~~~~~~~~--~~v~~~~~~~~----~~-~~L~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~lR~iK 160 (517)
T 3l24_A 93 PDEPNEYWADY--FDIELLVKPDQ----VE-KLLPY-----DKARFAYIGEYLEVAQALGFELMNPEPVMNFYHYHRAYK 160 (517)
T ss_dssp CCCCCSGGGGG--SEEEEESSGGG----CG-GGSCS-----CCTTEEEESSCHHHHHHHTCCCBSCHHHHHHHHHHHTSC
T ss_pred ccCchhhhhhc--cCeEEEcCHHH----HH-HHHhh-----ccCceEEEcCCcCHHHhhhhccCCchhHHHHHHHHHhcC
Confidence 00000 0111 22333222211 11 11211 112233332223333344444445667778899999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCCCc
Q 006890 312 NPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLS 391 (627)
Q Consensus 312 ~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~ 391 (627)
|++||+.||+|+++++.|+..+++.+ ++|+||.|+++.+.... ..|..+.+
T Consensus 161 s~~EIe~mR~A~~ia~~a~~~~~~~i---------------------------kpG~tE~el~~~~~~~~--~~g~~~~s 211 (517)
T 3l24_A 161 TQYELACMREANKIAVQGHKAARDAF---------------------------FQGKSEFEIQQAYLLAT--QHSENDNP 211 (517)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH---------------------------HTTCCHHHHHHHHHHHH--TCCGGGSS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhc---------------------------cCCCCHHHHHHHHHHHH--HcCCCcCC
Confidence 99999999999999999999888776 58999999998876543 34556789
Q ss_pred CCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhccCC
Q 006890 392 FPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFP 471 (627)
Q Consensus 392 f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~~p 471 (627)
|++|+++|+|++++||.|++. +.+++||+|++|+|++|+||++|+||||++|++ ++++++|+.|++++.+++++++|
T Consensus 212 f~~IVasG~naa~~H~~p~~~--~~l~~GDlVliD~G~~~~GY~sDiTRT~~vG~~-~e~~~ly~~vl~Aq~aai~~ikP 288 (517)
T 3l24_A 212 YGNIVALNENCAILHYTHFDR--VAPATHRSFLIDAGANFNGYAADITRTYDFTGE-GEFAELVATMKQHQIALMNQLAP 288 (517)
T ss_dssp SCCEEEEGGGGGCTTCCCCCS--SCCSSCCEEEEEEEEEETTEEEEEEEEEESSSC-SHHHHHHHHHHHHHHHHHTTCCT
T ss_pred cCCEEEEccccccccCCCCCC--ccccCCCEEEEeecEEECCEEEEeEEEEEcCCC-HHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999761 347999999999999999999999999999975 78999999999999999999998
Q ss_pred CCcccchHHHHHHHHHH-----------------HcCC---CCcccccccccccCccccCCCcCCCC-------------
Q 006890 472 NGTCGHTLDILARLPLW-----------------KYGL---DYRHGTGHGVGSYLNVHEGPQSISFK------------- 518 (627)
Q Consensus 472 ~G~~~~~l~~~a~~~l~-----------------~~G~---~~~h~~GHgvG~~l~vhE~P~~~~~~------------- 518 (627)
|+++.+|+.++++.+. +.|+ +|+|++||||| |++||.|.+....
T Consensus 289 -Gv~~~dI~~aa~~~i~~~L~~~G~~~~~~~~~~~~g~~~~~f~HglGHgiG--LdvHE~p~~~~~~~g~~~~~~~~~p~ 365 (517)
T 3l24_A 289 -GKLYGELHLDCHQRVAQTLSDFNIVDLSADEIVAKGITSTFFPHGLGHHIG--LQVHDVGGFMADEQGAHQEPPEGHPF 365 (517)
T ss_dssp -TCBHHHHHHHHHHHHHHHHHHTTSBSSCHHHHHHTTCGGGTCCSCSCCBCS--SSSSCCCCTTC---------------
T ss_pred -CCcHHHHHHHHHHHHHHHHHhcCCccccHHHHHhcCcccccCCCCCCCCCC--cccccCcccccccccccccccccccc
Confidence 9999999999998775 4454 68999999999 9999999764310
Q ss_pred -CCCCcccCCcEEeeCceeeec-------------------------CccEEEEeEeeEEecCCcccccCCcceeeeecc
Q 006890 519 -PRNVPIHASMTATDEPGYYED-------------------------GNFGIRLENVLVVTDANTKFNFGDKGYLSFEHI 572 (627)
Q Consensus 519 -~~~~~l~~Gmv~siEPg~y~~-------------------------~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~l 572 (627)
.++.+|+||||||||||+|++ |.+||||||+|+||++|+ |+|
T Consensus 366 l~~~~~Le~GMV~TIEPGiY~~~~~l~~~~~~~~~~~~~~~~~~~~~g~GGVRIED~VlVT~~G~------------e~L 433 (517)
T 3l24_A 366 LRCTRKIEANQVFTIEPGLYFIDSLLGDLAATDNNQHINWDKVAELKPFGGIRIEDNIIVHEDSL------------ENM 433 (517)
T ss_dssp CCTTCBCCTTEEEEECCEEECCHHHHHHHHTSGGGGGBCHHHHHHHGGGCEEECBEEEEECSSCE------------EEH
T ss_pred CCCCccccCCcEEEECCEEeechhhhhhhcccccccccccchhhhcCCCCEEEEeeEEEECCCcC------------eeC
Confidence 146789999999999999983 567999999999999997 888
Q ss_pred cc-cccc
Q 006890 573 TW-APYQ 578 (627)
Q Consensus 573 T~-~p~~ 578 (627)
|. +|.+
T Consensus 434 T~~~~~~ 440 (517)
T 3l24_A 434 TRELRLR 440 (517)
T ss_dssp HHHTTCC
T ss_pred CCccchh
Confidence 84 5554
No 18
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=100.00 E-value=1.6e-48 Score=401.06 Aligned_cols=234 Identities=21% Similarity=0.182 Sum_probs=208.6
Q ss_pred EecCCccchhh--hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHH
Q 006890 298 LLQQSPLALAK--AIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSD 375 (627)
Q Consensus 298 ~~~~~~i~~~r--~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~ 375 (627)
.+..+.+.++| +|||++||+.||+|+++++.++..+++++ ++|+||.|+++
T Consensus 20 ~~~~~~i~~~R~~~iKs~~EI~~~r~A~~i~~~a~~~~~~~i---------------------------~~G~tE~el~~ 72 (286)
T 3tav_A 20 GSMVGLFGRKKTVEQRTPGELDAMAAAGSIVGAALVAVRDAA---------------------------KAGVSTLELDQ 72 (286)
T ss_dssp ---CCTTCSCSBCCBCCHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------CTTCBHHHHHH
T ss_pred HHHHHHHHHhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHhc---------------------------cCCCcHHHHHH
Confidence 34457888999 99999999999999999999999887764 78999999999
Q ss_pred HHHHHHHhhcCCCC-----CcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHH
Q 006890 376 KLESFRASKEHFRG-----LSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAH 450 (627)
Q Consensus 376 ~l~~~~~~~~g~~~-----~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e 450 (627)
.++.++.+. |... .+|++|+++|+|++++||.|++ +++|++||+|++|+|++|+||++|+||||++|+|+++
T Consensus 73 ~~~~~~~~~-G~~~~~~~~~~f~~iv~~g~n~~~~H~~p~~--~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~ 149 (286)
T 3tav_A 73 VAESVIREA-GAVPSFLGYHGFPASICSSVNDQVVHGIPSA--TAVLADGDLVSIDCGAILDGWHGDSAWTFAVGTVIPS 149 (286)
T ss_dssp HHHHHHHHT-TCEETTTTGGGCCSSEEEEETTBCSCCCCCT--TCBCCTTCEEEEEEEEEETTEEEEEEEEEESSSCCHH
T ss_pred HHHHHHHHc-CCcccccccCCCCCceEEecCccccCCCCCC--CcccCCCCEEEEEEEEEECCEEEeeEEEEECCCCCHH
Confidence 999877543 4322 4799999999999999999972 3899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHH----HHc--CCC-CcccccccccccCccccCCCcCCCC-C-CC
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPL----WKY--GLD-YRHGTGHGVGSYLNVHEGPQSISFK-P-RN 521 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l----~~~--G~~-~~h~~GHgvG~~l~vhE~P~~~~~~-~-~~ 521 (627)
|+++|+.+++++.+++++++| |+++++|+.++++++ ++. |+. +.|++||||| +++||+|.+.... + ++
T Consensus 150 ~~~~~~~v~~a~~~~i~~~kp-G~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~GHgiG--~~~hE~P~i~~~~~~~~~ 226 (286)
T 3tav_A 150 DEALSEATRLSMEAGIAAMIP-GNRLTDVSHAIELGTRAAEKQFDRAFGIVDGYGGHGIG--RSMHLDPFLPNEGAPGKG 226 (286)
T ss_dssp HHHHHHHHHHHHHHHHHTCCT-TCBHHHHHHHHHHHHHHHHHHHTCCCEECTTCCEEECS--SSSSEEEEECSSCCSSCS
T ss_pred HHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhcCCCcccCCcccCccc--ccccCCccccCcCCCCCC
Confidence 999999999999999999998 999999999999999 999 874 6899999999 9999999875431 1 67
Q ss_pred CcccCCcEEeeCceeeec-----------------CccEEEEeEeeEEecCCcccccCCcceeeeecccccc
Q 006890 522 VPIHASMTATDEPGYYED-----------------GNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAP 576 (627)
Q Consensus 522 ~~l~~Gmv~siEPg~y~~-----------------~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~~p 576 (627)
.+|++||||++|||+|.+ |.+|+|+||+|+||++|+ |.||..|
T Consensus 227 ~~L~~GmV~tiEPgiy~~~~~~~~~~~~w~~~t~dg~~gvriEd~v~Vt~~G~------------e~LT~~p 286 (286)
T 3tav_A 227 PLLAVGSVLAIEPMLTLGTTQTRVLADDWTVVTTDGSRAAHWEHTVAVTEAGP------------RILTMRP 286 (286)
T ss_dssp SBCCTTBEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEEECCTTSC------------EESSCCC
T ss_pred CCcCCCCEEEEcCEEEcCCCceEecCCCceEEecCCCcEEEeeeEEEECCCcc------------eeCCCCC
Confidence 899999999999999975 478999999999999998 8999776
No 19
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=100.00 E-value=1.8e-48 Score=396.59 Aligned_cols=231 Identities=14% Similarity=0.156 Sum_probs=206.3
Q ss_pred hhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcC
Q 006890 307 AKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEH 386 (627)
Q Consensus 307 ~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g 386 (627)
||.|||++||+.||+|+++++.++..+++.+ +||+||.|+++.++.+..+. |
T Consensus 1 M~~IKs~~EI~~mr~A~~i~~~a~~~~~~~i---------------------------kpG~tE~el~~~~~~~~~~~-G 52 (264)
T 3tb5_A 1 MITLKSPREIEMMDESGELLADVHRHLRTFI---------------------------KPGITSWDIEVFVRDFIESH-G 52 (264)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------CTTCBHHHHHHHHHHHHHHT-T
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHHHHhC---------------------------cCCCCHHHHHHHHHHHHHHc-C
Confidence 7899999999999999999999998887764 79999999999999876443 3
Q ss_pred CC-----CCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHH
Q 006890 387 FR-----GLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKG 461 (627)
Q Consensus 387 ~~-----~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~ 461 (627)
.. ..+|++++++|.|++.+||.|++ ++|++||+|++|+|+.|+||++|+||||++|+++++|+++|+.++++
T Consensus 53 ~~~~~~~~~~~~~~v~~g~~~~~~H~~~~~---~~l~~Gdlv~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~l~~~v~~a 129 (264)
T 3tb5_A 53 GVAAQIGYEGYKYATCCSINDEICHGFPRK---KVLKDGDLIKVDMCVDLKGAISDSCWSYVVGESTPEIDRLMEVTKKA 129 (264)
T ss_dssp CEETTTTGGGCCCSEEEEETTEEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHH
T ss_pred CCcccccccCCCcceEECCcccccCCCCCC---ccccCCCEEEEeccceecceeeecccccccCCccHHHHHHHHHHHHH
Confidence 22 24678999999999999999986 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCcccchHHHHHHHHHHHcCCC-CcccccccccccCccccCCCcCCCCC--CCCcccCCcEEeeCceeee
Q 006890 462 HIALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRHGTGHGVGSYLNVHEGPQSISFKP--RNVPIHASMTATDEPGYYE 538 (627)
Q Consensus 462 ~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h~~GHgvG~~l~vhE~P~~~~~~~--~~~~l~~Gmv~siEPg~y~ 538 (627)
+.+++++++| |+++++|+.++++.+.+.|+. +.|++||||| +.+||.|.+..... ++.+|+||||||+|||+|.
T Consensus 130 ~~~~i~~~kp-G~~~~di~~a~~~~~~~~g~~~~~~~~GHgiG--~~~~e~p~i~~~~~~~~~~~L~~Gmv~tiEPgiy~ 206 (264)
T 3tb5_A 130 LYLGIEQAQV-GNRIGDIGHAIQTYVEGEGYGVVRDFVGHGIG--PTIHESPMIPHYGEAGKGLRLKEGMVITIEPMVNT 206 (264)
T ss_dssp HHHHHHTCCT-TCBHHHHHHHHHHHHHHTTCEECCSCCEEECS--SSSSEEEEECSSCCTTCSCBCCTTCEEEECCEEES
T ss_pred HHHHHhhhCC-CCCHHHHHHHHHHHHHHcCCceeeeceecCCC--CCCccCCccCccccCCCCCCccCCcEEEEeeeEEc
Confidence 9999999998 999999999999999999994 6899999999 99999998754322 4578999999999999996
Q ss_pred c-----------------CccEEEEeEeeEEecCCcccccCCcceeeeeccccccccccccc
Q 006890 539 D-----------------GNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMIN 583 (627)
Q Consensus 539 ~-----------------~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~~p~~~~~i~ 583 (627)
+ +.+||||||+|+||++|+ |+||..|.++..|+
T Consensus 207 ~~~~~~~~~d~wt~~~~~g~~gvriEd~vlVT~~G~------------e~LT~~p~el~~ie 256 (264)
T 3tb5_A 207 GTWRMKMDPNGWTAYTEDGGLSCQYEHSLAITKEGP------------RILTSQGEELTYLE 256 (264)
T ss_dssp SCSCEEECTTSSCEEETTCCCEEECCEEEECCTTCC------------EETTCCSSTTCC--
T ss_pred CCCceEEcCCCCeEEecCCccEEEeceEEEEcCCcC------------EECCCCCcchhhhh
Confidence 3 456999999999999997 99999997766554
No 20
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=100.00 E-value=2.5e-48 Score=394.89 Aligned_cols=228 Identities=18% Similarity=0.196 Sum_probs=204.6
Q ss_pred hhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhc
Q 006890 306 LAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKE 385 (627)
Q Consensus 306 ~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~ 385 (627)
.|++|||++||+.||+|+++++.++..+++++ ++|+||.|+++.++.++.+.
T Consensus 4 ~~~~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i---------------------------~pG~tE~el~~~~~~~~~~~- 55 (262)
T 3mx6_A 4 SMIKIHTEKDFIKMRAAGKLAAETLDFITDHV---------------------------KPNVTTNSLNDLCHNFITSH- 55 (262)
T ss_dssp --CCCCCHHHHHHHHHHHHHHHHHHHHHGGGC---------------------------CTTCBHHHHHHHHHHHHHHT-
T ss_pred CcceeCCHHHHHHHHHHHHHHHHHHHHHHHHc---------------------------CCCCcHHHHHHHHHHHHHHc-
Confidence 47999999999999999999999998876653 79999999999999877543
Q ss_pred CCCC-----CcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHH
Q 006890 386 HFRG-----LSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLK 460 (627)
Q Consensus 386 g~~~-----~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~ 460 (627)
|... .+|++++++|.|++++||.|++ ++|++||+|++|+|++|+||++|+||||++|+|+++|+++|+.+++
T Consensus 56 G~~~~~~~~~~f~~iv~~g~n~~~~H~~p~~---~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~ 132 (262)
T 3mx6_A 56 NAIPAPLNYKGFPKSICTSINHVVCHGIPND---KPLKNGDIVNIDVTVILDGWYGDTSRMYYVGDVAIKPKRLIQVTYD 132 (262)
T ss_dssp TCEETTTTGGGCCSSSEEEETTEEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHH
T ss_pred CCcccccccCCCCcceEecccccccCCCCCC---cccCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHH
Confidence 3221 4699999999999999999985 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCCcccchHHHHHHHHHHHcCCC-CcccccccccccCccccCCCcCCCC-C-CCCcccCCcEEeeCceee
Q 006890 461 GHIALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRHGTGHGVGSYLNVHEGPQSISFK-P-RNVPIHASMTATDEPGYY 537 (627)
Q Consensus 461 ~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h~~GHgvG~~l~vhE~P~~~~~~-~-~~~~l~~Gmv~siEPg~y 537 (627)
++.+++++++| |+++.+|+.++++++++.|+. +.|++||||| +++||.|.+.+.. + ++.+|++||||++|||+|
T Consensus 133 a~~~~i~~~kp-G~~~~~i~~~~~~~~~~~G~~~~~~~~GHgiG--~~~hE~p~i~~~~~~~~~~~L~~Gmv~tiEPgiy 209 (262)
T 3mx6_A 133 AMMKGIEVVRP-GAKLGDIGYAIQSYAEKHNYSVVRDYTGHGIG--RVFHDKPSILNYGRNGTGLTLKEGMFFTVEPMIN 209 (262)
T ss_dssp HHHHHHHTCST-TCBHHHHHHHHHHHHHHTTCEECCSCCEEECS--SSSSEEEEECSSCCTTCSCBCCTTCEEEECCEEE
T ss_pred HHHHHHHHhcC-CCcHHHHHHHHHHHHHHcCCccCCCccccccC--CcccCCCcccccCCCCCCCEeCCCCEEEEeCEEE
Confidence 99999999998 999999999999999999995 7899999999 9999999875431 1 678999999999999999
Q ss_pred ecCccEEEE-------------------eEeeEEecCCcccccCCcceeeeecccccccccc
Q 006890 538 EDGNFGIRL-------------------ENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIK 580 (627)
Q Consensus 538 ~~~~~Gvri-------------------Ed~v~V~~~g~~~~~~~~~~~~fe~lT~~p~~~~ 580 (627)
. +.+|+|+ ||+|+||++|+ |+||..|.++.
T Consensus 210 ~-g~~gvri~~~d~w~~~~~~~~~~~~~Ed~v~Vt~~G~------------e~LT~~p~~l~ 258 (262)
T 3mx6_A 210 A-GNYDTILSKLDGWTVTTRDKSLSAQFEHTIGVTKDGF------------EIFTLSPKKLD 258 (262)
T ss_dssp S-SCSCEEECTTTSCCEEETTCCCEEECBEEEEECSSSE------------EESCCCTTCCC
T ss_pred c-CCCeEEEecCCCceEEecCCCceeeeceEEEECCCcC------------eECCCCCcccC
Confidence 7 7788877 99999999997 99999988754
No 21
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=100.00 E-value=8.4e-48 Score=395.23 Aligned_cols=219 Identities=19% Similarity=0.232 Sum_probs=199.2
Q ss_pred hhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhc
Q 006890 306 LAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKE 385 (627)
Q Consensus 306 ~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~ 385 (627)
.+|++||++||+.||+|+++++.++..+++++ ++|+||.|+++.++.++.+.+
T Consensus 37 ~~R~iKs~~EI~~~r~A~~i~~~a~~~~~~~i---------------------------~pG~tE~el~~~~~~~~~~~G 89 (285)
T 3pka_A 37 SEPWVQTPEVIEKMRVAGRIAAGALAEAGKAV---------------------------APGVTTDELDRIAHEYLVDNG 89 (285)
T ss_dssp CSCSBCCHHHHHHHHHHHHHHHHHHHHHHHTC---------------------------CTTCBHHHHHHHHHHHHHHTT
T ss_pred cceecCCHHHHHHHHHHHHHHHHHHHHHHHhc---------------------------CCCCcHHHHHHHHHHHHHHcC
Confidence 69999999999999999999999999887764 789999999999998775433
Q ss_pred CCC----CCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHH
Q 006890 386 HFR----GLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKG 461 (627)
Q Consensus 386 g~~----~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~ 461 (627)
... ..+|++++++|+|++++||.|++ ++|++||+|++|+|++|+||++|+||||++|+|+++|+++|+.++++
T Consensus 90 ~~~~~~~~~~f~~iv~~g~n~~~~H~~p~~---~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a 166 (285)
T 3pka_A 90 AYPSTLGYKGFPKSCCTSLNEVICHGIPDS---TVITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREA 166 (285)
T ss_dssp CEETTTTGGGCCSSSEEEETTEEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHH
T ss_pred CccccccccCCCCceEecccceeecCCCCC---cccCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHH
Confidence 221 14799999999999999999975 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCcccchHHHHHHHHHHHcCCC-CcccccccccccCccccCCCcCCCC-C-CCCcccCCcEEeeCceeee
Q 006890 462 HIALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRHGTGHGVGSYLNVHEGPQSISFK-P-RNVPIHASMTATDEPGYYE 538 (627)
Q Consensus 462 ~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h~~GHgvG~~l~vhE~P~~~~~~-~-~~~~l~~Gmv~siEPg~y~ 538 (627)
+.+++++++| |+++++|+.++++++++.|+. +.|++||||| +++||+|.+.... + ++.+|++||||++|||+|.
T Consensus 167 ~~~~i~~~kp-G~~~~di~~~~~~~~~~~G~~~~~~~~GHgiG--~~~hE~P~i~~~~~~~~~~~L~~Gmv~tiEPgiy~ 243 (285)
T 3pka_A 167 TMRAINTVKP-GRALSVIGRVIESYANRFGYNVVRDFTGHGIG--TTFHNGLVVLHYDQPAVETIMQPGMTFTIEPMINL 243 (285)
T ss_dssp HHHHHHTCCT-TSBTTHHHHHHHHHHHTTTCEECCSSCEEBCS--SSSSCSCEECSSCCTTCCCBCCTTBEEEECCEEES
T ss_pred HHHHHHHHhc-CCcHHHHHHHHHHHHHHcCCccCCCcccccCC--CcccCCCcccCccCCCCCCccCCCCEEEEcCEEEc
Confidence 9999999998 999999999999999999995 8999999999 9999999875321 1 5789999999999999997
Q ss_pred c-----------------CccEEEEeEeeEEecCCc
Q 006890 539 D-----------------GNFGIRLENVLVVTDANT 557 (627)
Q Consensus 539 ~-----------------~~~GvriEd~v~V~~~g~ 557 (627)
+ |.+|+|+||+|+||++|+
T Consensus 244 ~~~~~~~~~~gw~~~~~~g~~gvriEdtv~Vt~~G~ 279 (285)
T 3pka_A 244 GALDYEIWDDGWTVVTKDRKWTAQFEHTLLVTDTGV 279 (285)
T ss_dssp SCSCEEECTTSCCEEETTCCCEEECBEEEEECSSSE
T ss_pred CCCceeecCCCceEEecCCCcEEEEeeEEEECCCcC
Confidence 4 578999999999999997
No 22
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}
Probab=100.00 E-value=3.3e-47 Score=398.82 Aligned_cols=232 Identities=19% Similarity=0.225 Sum_probs=208.0
Q ss_pred hhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhc
Q 006890 306 LAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKE 385 (627)
Q Consensus 306 ~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~ 385 (627)
.+++|||++||+.||+|+++++.++..+++++ ++|+||.||++.+++++.+.+
T Consensus 99 ~~~~IKs~~EIe~mR~A~~ia~~al~~~~~~i---------------------------kpGvTE~El~~~~~~~~~~~G 151 (368)
T 3s6b_A 99 SDIYVNNEEEIQRIREACILGRKTLDYAHTLV---------------------------SPGVTTDEIDRKVHEFIIKNN 151 (368)
T ss_dssp TCCCCCCHHHHHHHHHHHHHHHHHHHHHHHTC---------------------------CTTCBHHHHHHHHHHHHHHTT
T ss_pred CCceeCCHHHHHHHHHHHHHHHHHHHHHHHHc---------------------------cCCCCHHHHHHHHHHHHHHcC
Confidence 57999999999999999999999998887654 799999999999998775433
Q ss_pred CCC----CCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecC---CCCHHHHHHHHHH
Q 006890 386 HFR----GLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFG---KPSAHEKACYTAV 458 (627)
Q Consensus 386 g~~----~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G---~p~~e~~~~y~~v 458 (627)
... +.+|++|+++|.|++++||.|++ ++|++||+|++|+|++|+||++|+||||++| +++++++++|+++
T Consensus 152 a~ps~l~y~~Fp~iv~sg~N~~i~H~~p~~---r~L~~GDiV~iD~G~~~~GY~sDitRT~~vGg~~~~s~e~~~ly~~v 228 (368)
T 3s6b_A 152 AYPSTLNYYKFPKSCCTSVNEIVCHGIPDY---RPLKSGDIINIDISVFYKGVHSDLNETYFVGDINDVPKEGKELVETC 228 (368)
T ss_dssp CEETTTTGGGCCSSEEEEETTEEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEECSCGGGSCHHHHHHHHHH
T ss_pred CccccccccCCCCeEEEcCccccccCCCCC---ccccCCCEEEEEEeEEECcEEEEEEEEEEECCCCCCCHHHHHHHHHH
Confidence 221 24799999999999999999975 8999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC-CcccccccccccCccccCCCcCCCCC--CCCcccCCcEEeeCce
Q 006890 459 LKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRHGTGHGVGSYLNVHEGPQSISFKP--RNVPIHASMTATDEPG 535 (627)
Q Consensus 459 ~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h~~GHgvG~~l~vhE~P~~~~~~~--~~~~l~~Gmv~siEPg 535 (627)
++++.+++++++| |+++++|+.++++++++.|+. +.|++||||| +++||.|.+..+.. ...+|++|||||||||
T Consensus 229 ~ea~~aai~~ikP-G~~~~dI~~aa~~~i~~~G~~~~~~~~GHGIG--~~vHE~P~i~~~~~~~~~~~L~~GMVfTIEPg 305 (368)
T 3s6b_A 229 YFSLMEAIKKCKP-GMFYKNIGTLIDAYVSKKNFSVVRSYSGHGVG--KLFHSNPTVPHFKKNKAVGIMKPGHVFTIEPM 305 (368)
T ss_dssp HHHHHHHHHHCCT-TCBTHHHHHHHHHHHHTTTCEECCSCCEEECS--SSSSEEEEECSSSSCCCCCBCCTTCEEEECCE
T ss_pred HHHHHHHHHHccC-CCcHHHHHHHHHHHHHHcCCCcccceeeCCCC--ccccCCCccccccCCCCCCEECCCCEEEEcCe
Confidence 9999999999998 999999999999999999995 8899999999 99999998865321 4578999999999999
Q ss_pred eee-----------------cCccEEEEeEeeEEecCCcccccCCcceeeeecccc-cccccccc
Q 006890 536 YYE-----------------DGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITW-APYQIKMI 582 (627)
Q Consensus 536 ~y~-----------------~~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~-~p~~~~~i 582 (627)
+|. +|.+|+|+||+|+||++|+ |.||. .|.+..++
T Consensus 306 iy~~~~~~~~~~d~wt~~t~dG~~gvriEdtVlVTe~G~------------EvLT~~~pk~~~~~ 358 (368)
T 3s6b_A 306 INQGHYSDVLWPDQWTSATSDGKLSAQFEHTLLITNNGV------------EILTKRTQDSPPLG 358 (368)
T ss_dssp EESSCSCEEECTTSSCEEETTCCCEEECBEEEEEETTEE------------EETTCCCTTCCCCS
T ss_pred EEcCcccccccCCCceeEeeCCccEEEEeEEEEEcCCcC------------eECCCCCCCCcCce
Confidence 997 4678999999999999997 89994 66666555
No 23
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=100.00 E-value=4e-47 Score=386.48 Aligned_cols=228 Identities=19% Similarity=0.227 Sum_probs=204.3
Q ss_pred hhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHH-HHhhc
Q 006890 307 AKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESF-RASKE 385 (627)
Q Consensus 307 ~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~-~~~~~ 385 (627)
||++||++||+.||+|+++++.++..+++. +++|+||.|+++.++.+ +.+ .
T Consensus 1 m~~iKs~~Ei~~~r~A~~i~~~~~~~~~~~---------------------------i~~G~te~el~~~~~~~~~~~-~ 52 (263)
T 2gg2_A 1 AISIKTPEDIEKMRVAGRLAAEVLEMIEPY---------------------------VKPGVSTGELDRICNDYIVNE-Q 52 (263)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHGGG---------------------------CSTTCBHHHHHHHHHHHHHHT-S
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHHHHHHH---------------------------cCCCCcHHHHHHHHHHHHHHH-h
Confidence 689999999999999999999998776543 37899999999999988 643 3
Q ss_pred CCC-----CCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHH
Q 006890 386 HFR-----GLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLK 460 (627)
Q Consensus 386 g~~-----~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~ 460 (627)
|.. ..+|++++++|.|++++||.|++ +++|++||+|++|+|++|+||++|+||||++|+|+++|+++|+.+++
T Consensus 53 g~~~~~~~~~~f~~iv~~g~n~~~~H~~p~~--~~~l~~gd~v~iD~G~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~ 130 (263)
T 2gg2_A 53 HAVSACLGYHGYPKSVCISINEVVCHGIPDD--AKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQE 130 (263)
T ss_dssp CCEESSTTGGGCCSSSEEEETTEEECCCCCT--TCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHH
T ss_pred CCccccccccCCCcceEecccccccCCCCCC--CcCcCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHH
Confidence 432 24799999999999999999964 37899999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCCcccchHHHHHHHHHHHcCCC-CcccccccccccCccccCCCcCCCC-C-CCCcccCCcEEeeCceee
Q 006890 461 GHIALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRHGTGHGVGSYLNVHEGPQSISFK-P-RNVPIHASMTATDEPGYY 537 (627)
Q Consensus 461 ~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h~~GHgvG~~l~vhE~P~~~~~~-~-~~~~l~~Gmv~siEPg~y 537 (627)
++.+++++++| |+++++|+.++++.+++.|+. +.|++||||| +++||.|.+.+.. + ++.+|++|||||+|||+|
T Consensus 131 a~~~~i~~~kp-G~~~~~v~~~~~~~~~~~G~~~~~~~~GHgiG--~~~he~p~i~~~~~~~~~~~l~~Gmv~tiEPgi~ 207 (263)
T 2gg2_A 131 SLYLALRMVKP-GINLREIGAAIQKFVEAEGFSVVREYCGHGIG--RGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVN 207 (263)
T ss_dssp HHHHHHHHCST-TCBHHHHHHHHHHHHHHTTCEECSSCCEEECS--SSSSEEEEECSSCCTTCCCBCCTTCEEEECCEEE
T ss_pred HHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCEECCCcccccCC--cceecCCcccCccCCCCCCCcCCCCEEEEecEEE
Confidence 99999999998 999999999999999999995 7899999999 9999999876432 1 568999999999999999
Q ss_pred ec-----------------CccEEEEeEeeEEecCCcccccCCcceeeeeccccccccc
Q 006890 538 ED-----------------GNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQI 579 (627)
Q Consensus 538 ~~-----------------~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~~p~~~ 579 (627)
.+ +.+|+|+||+|+||++|+ |.||..|.+.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~g~~g~riEdtvlVt~~G~------------e~LT~~p~~l 254 (263)
T 2gg2_A 208 AGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDNGC------------EILTLRKDDT 254 (263)
T ss_dssp SSCSCEEECTTSSCEEETTCCCEEECBEEEEEETTEE------------EESSCCTTCC
T ss_pred cCCCceEEcCCCceEEecCCCeEEEEEEEEEECCCcc------------EEeCCCCccc
Confidence 73 467999999999999996 8999988764
No 24
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=100.00 E-value=4.7e-47 Score=385.47 Aligned_cols=220 Identities=23% Similarity=0.254 Sum_probs=196.9
Q ss_pred chhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhh
Q 006890 305 ALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASK 384 (627)
Q Consensus 305 ~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~ 384 (627)
..||++||++||+.||+|+++++.++..+++. ++||+||.|+++.++.++.+.
T Consensus 11 ~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~---------------------------i~pG~te~el~~~~~~~~~~~ 63 (262)
T 1o0x_A 11 HHMIRIKTPSEIEKMKKAGKAVAVALREVRKV---------------------------IVPGKTAWDVETLVLEIFKKL 63 (262)
T ss_dssp --CCCCCCHHHHHHHHHHHHHHHHHHHHGGGG---------------------------CSTTCBHHHHHHHHHHHHHHH
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHHHHHH---------------------------CCCCCcHHHHHHHHHHHHHHc
Confidence 46999999999999999999999988766543 378999999999999877544
Q ss_pred cC---CCC-CcCCcccccCCCcccccccCCCCccCC-CCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHH
Q 006890 385 EH---FRG-LSFPTISSVGPNAAIMHYSPQSETCAE-MDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVL 459 (627)
Q Consensus 385 ~g---~~~-~~f~~i~~~G~n~a~~h~~~~~~~~~~-l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~ 459 (627)
+. +.+ .+|++++++|+|++++||.|++ ++ |++||+|++|+|++|+||++|+||||++|+|+++|+++|+.++
T Consensus 64 G~~~~~~~~~~f~~~v~~g~n~~~~H~~p~~---~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~ 140 (262)
T 1o0x_A 64 RVKPAFKGYGGYKYATCVSVNEEVVHGLPLK---EKVFKEGDIVSVDVGAVYQGLYGDAAVTYIVGETDERGKELVRVTR 140 (262)
T ss_dssp TCEESSTTGGGCCCSEEEEETTBCSCCCCCT---TCBCCTTCEEEEEEEEEETTEEEEEEEEEESSCCCHHHHHHHHHHH
T ss_pred CCccccccccCCCcceEecccccccCCCCCC---CcccCCCCEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHH
Confidence 32 111 5789999999999999999975 78 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC-CcccccccccccCccccCCCcCCCC-C-CCCcccCCcEEeeCcee
Q 006890 460 KGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRHGTGHGVGSYLNVHEGPQSISFK-P-RNVPIHASMTATDEPGY 536 (627)
Q Consensus 460 ~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h~~GHgvG~~l~vhE~P~~~~~~-~-~~~~l~~Gmv~siEPg~ 536 (627)
+++.+++++++| |+++.+|+.++++.+++.|+. +.|++||||| +++||.|.+.+.. + ++.+|+|||||++|||+
T Consensus 141 ~a~~~~i~~~kp-G~~~~~v~~~~~~~~~~~G~~~~~~~~GHgiG--~~~he~p~i~~~~~~~~~~~L~~Gmv~tiEPgi 217 (262)
T 1o0x_A 141 EVLEKAIKMIKP-GIRLGDVSHCIQETVESVGFNVIRDYVGHGVG--RELHEDPQIPNYGTPGTGVVLRKGMTLAIEPMV 217 (262)
T ss_dssp HHHHHHHHTCCT-TSBHHHHHHHHHHHHHHTTCEECCSSCEEECS--SSSSEEEEECSCCCTTCSCBCCTTCEEEECCEE
T ss_pred HHHHHHHHHhcC-CCcHHHHHHHHHHHHHHcCCcccCCcccCccc--ccccCCCccCCCCCCCCCCccCCCCEEEECCEE
Confidence 999999999998 999999999999999999995 8999999999 9999999865432 1 57899999999999999
Q ss_pred ee-----------------cCccEEEEeEeeEEecCCc
Q 006890 537 YE-----------------DGNFGIRLENVLVVTDANT 557 (627)
Q Consensus 537 y~-----------------~~~~GvriEd~v~V~~~g~ 557 (627)
|. ++.+|+|+||+|+||++|+
T Consensus 218 ~~g~~~v~~~~~~w~~~~~~g~~gvriEdtvlVt~~G~ 255 (262)
T 1o0x_A 218 SEGDWRVVVKEDGWTAVTVDGSRCAHFEHTILITENGA 255 (262)
T ss_dssp ESSCCCEEECTTSSCEEETTCCCEEECBEEEEECSSSE
T ss_pred EcCCCceeecCCCceEEeeCCCcEEEEEEEEEECCCcc
Confidence 97 3678999999999999997
No 25
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=100.00 E-value=2.7e-46 Score=389.56 Aligned_cols=229 Identities=17% Similarity=0.185 Sum_probs=204.7
Q ss_pred hhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhc
Q 006890 306 LAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKE 385 (627)
Q Consensus 306 ~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~ 385 (627)
.+|+|||++||+.||+|+++++.++..+++++ ++|+||.||++.+++++.+.+
T Consensus 71 ~~~~iKs~~EI~~mR~A~~ia~~al~~~~~~i---------------------------~pGvte~el~~~~~~~~~~~G 123 (329)
T 2b3h_A 71 SQIKLLSSEDIEGMRLVCRLAREVLDVAAGMI---------------------------KPGVTTEEIDHAVHLACIARN 123 (329)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHTC---------------------------CTTCBHHHHHHHHHHHHHHTT
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHHh---------------------------hCCCcHHHHHHHHHHHHHHcC
Confidence 58999999999999999999999998877654 789999999999998875443
Q ss_pred CCC----CCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHH
Q 006890 386 HFR----GLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKG 461 (627)
Q Consensus 386 g~~----~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~ 461 (627)
... ..+|++++++|.|++++||.|++ ++|++||+|++|+|++|+||++|+||||++|+++++|+++|+.++++
T Consensus 124 ~~~~~~~y~~fp~iv~sg~n~~~~H~~p~~---~~L~~GDiv~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~l~~~v~~a 200 (329)
T 2b3h_A 124 CYPSPLNYYNFPKSCCTSVNEVICHGIPDR---RPLQEGDIVNVDITLYRNGYHGDLNETFFVGEVDDGARKLVQTTYEC 200 (329)
T ss_dssp CEETTTTGGGCCSSSEEEETTEEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHH
T ss_pred CccccccccCCCCeEEecCCCCcCCCCCCC---cCCCCCCEEEEEeeEEECCEEEeeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 221 24799999999999999999975 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCcccchHHHHHHHHHHHcCCC-CcccccccccccCccccCCCcCCCCC--CCCcccCCcEEeeCceeee
Q 006890 462 HIALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRHGTGHGVGSYLNVHEGPQSISFKP--RNVPIHASMTATDEPGYYE 538 (627)
Q Consensus 462 ~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h~~GHgvG~~l~vhE~P~~~~~~~--~~~~l~~Gmv~siEPg~y~ 538 (627)
+.+++++++| |+++.+|+.++++++++.|+. +.|++||||| +++||.|.+..... ...+|++|||||||||+|.
T Consensus 201 ~~~ai~~~kP-G~~~~dI~~~~~~~~~~~G~~~~~~~~GHGIG--~~~HE~P~i~~~~~~~~~~~L~~GMVftIEPgiy~ 277 (329)
T 2b3h_A 201 LMQAIDAVKP-GVRYRELGNIIQKHAQANGFSVVRSYCGHGIH--KLFHTAPNVPHYAKNKAVGVMKSGHVFTIEPMICE 277 (329)
T ss_dssp HHHHHHTCCT-TCBTTHHHHHHHHHHHHTTCEECCSCCEEECS--SSSSEEEEECCSSSCCCCCBCCTTCEEEECCEEES
T ss_pred HHHHHHhcCC-CCcHHHHHHHHHHHHHHcCCCccCCcccCCcC--cccccCCcccccccCCCCCEECCCCEEEEeCCcCc
Confidence 9999999998 999999999999999999995 8899999999 99999998765321 2478999999999999995
Q ss_pred -----------------cCccEEEEeEeeEEecCCcccccCCcceeeeecccc-c-cccc
Q 006890 539 -----------------DGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITW-A-PYQI 579 (627)
Q Consensus 539 -----------------~~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~-~-p~~~ 579 (627)
+|.+|+|+||+|+||++|+ |.||. . |..+
T Consensus 278 ~~~~~~~~~d~w~~~~~~G~~g~riEdtvlVTe~G~------------evLT~~~~~k~~ 325 (329)
T 2b3h_A 278 GGWQDETWPDGWTAVTRDGKRSAQFEHTLLVTDTGC------------EILTRRLDSARP 325 (329)
T ss_dssp SCCCEEECTTSCCEEETTCCCEEECBEEEEECSSSE------------EETTCCSSCSSC
T ss_pred CcccccccCCCceeEeeCCeEEEEEeeEEEEcCCee------------EECCCCCCCCCC
Confidence 4679999999999999997 88885 3 5443
No 26
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=100.00 E-value=7.9e-46 Score=374.71 Aligned_cols=222 Identities=18% Similarity=0.197 Sum_probs=197.7
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCC
Q 006890 310 IKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRG 389 (627)
Q Consensus 310 iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~ 389 (627)
|||++||+.||+|+++++.++..+++.+ ++|+||.|+++.++.++... |...
T Consensus 3 iKs~~Ei~~~r~A~~i~~~~~~~~~~~i---------------------------~~G~te~el~~~~~~~~~~~-g~~~ 54 (252)
T 1qxy_A 3 VKTEEELQALKEIGYICAKVRNTMQAAT---------------------------KPGITTKELDNIAKELFEEY-GAIS 54 (252)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------CTTCBHHHHHHHHHHHHHHH-TCEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------CCCCcHHHHHHHHHHHHHHc-CCcc
Confidence 9999999999999999999988776543 78999999999999877443 4322
Q ss_pred C-----cCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCH-HHHHHHHHHHHHHH
Q 006890 390 L-----SFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSA-HEKACYTAVLKGHI 463 (627)
Q Consensus 390 ~-----~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~-e~~~~y~~v~~~~~ 463 (627)
. +|++++++|.|++++||.|++ ++|++||+|++|+|++|+||++|+||||++|++++ +|+++|+.+++++.
T Consensus 55 ~~~~~~~f~~~v~~g~n~~~~H~~p~~---~~l~~gd~v~iD~g~~~~gy~sD~tRT~~vG~~~~~~~~~~~~~~~~a~~ 131 (252)
T 1qxy_A 55 APIHDENFPGQTCISVNEEVAHGIPSK---RVIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQKVCDVATMAFE 131 (252)
T ss_dssp HHHHHHCCSSSSEEEETTEEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEECSCCSCTHHHHHHHHHHHHHH
T ss_pred cccccCCCCcceEEcCCccccCCCCCC---cCcCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHH
Confidence 1 799999999999999999975 89999999999999999999999999999999999 99999999999999
Q ss_pred HHHhccCCCCcccchHHHHHHHHHHHcCCC-CcccccccccccCccccCC-CcCCCC-C-CCCcccCCcEEeeCceeee-
Q 006890 464 ALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRHGTGHGVGSYLNVHEGP-QSISFK-P-RNVPIHASMTATDEPGYYE- 538 (627)
Q Consensus 464 ~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h~~GHgvG~~l~vhE~P-~~~~~~-~-~~~~l~~Gmv~siEPg~y~- 538 (627)
+++++++| |+++++|+.++++.+++.|+. +.|++||||| +++||.| .+.++. + ++.+|++|||||+|||+|.
T Consensus 132 ~~i~~~kp-G~~~~~i~~~~~~~~~~~g~~~~~~~~GHgiG--~~~he~p~~i~~~~~~~~~~~l~~Gmv~tiEPgi~~g 208 (252)
T 1qxy_A 132 NAIAKVKP-GTKLSNIGKAVHNTARQNDLKVIKNLTGHGVG--LSLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFISSN 208 (252)
T ss_dssp HHHTTCCT-TCBTHHHHHHHHHHHHHTTCEECTTCCEEECS--SSSSEEEEEECSSCCTTCCCBCCTTBEEEECCEEESS
T ss_pred HHHHHhcC-CCCHHHHHHHHHHHHHHcCCEecCCccccccC--cccccCCccccCCCCCCCCCCccCCCEEEEecEEEcC
Confidence 99999997 999999999999999999994 7899999999 9999999 765432 1 5689999999999999997
Q ss_pred ----------------cCccEEEEeEeeEEecCCcccccCCcceeeeecccccccc
Q 006890 539 ----------------DGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQ 578 (627)
Q Consensus 539 ----------------~~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~~p~~ 578 (627)
++.+|+|+||+|+||++| + .||..|.+
T Consensus 209 ~~~~~~~~~~~~~~~~~g~~g~riEdtvlVt~~G-e------------~Lt~~p~~ 251 (252)
T 1qxy_A 209 ASFVTEGKNEWAFETSDKSFVAQIEHTVIVTKDG-P------------ILTTKIEE 251 (252)
T ss_dssp CSSCEECSSSSCEECTTCCCEEEEEEEEECCTTC-C------------EETTCC--
T ss_pred CCceEecCCCceEEecCCCcEEEEEEEEEECCCc-e------------EccCCCCC
Confidence 567999999999999998 4 67777764
No 27
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=100.00 E-value=9.7e-46 Score=388.37 Aligned_cols=235 Identities=18% Similarity=0.133 Sum_probs=207.6
Q ss_pred EecCCccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHH
Q 006890 298 LLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKL 377 (627)
Q Consensus 298 ~~~~~~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l 377 (627)
+...++....|.|||++||+.||+|+++++.++..+++.+ +||+||.|+++.+
T Consensus 51 v~~~~~~~~~~~VKs~~EI~~mR~A~~i~~~a~~~~~~~i---------------------------kpG~te~el~~~~ 103 (337)
T 4fuk_A 51 VKVYNIQFLHDDSKKTAEIQRIKTVCQLSREVLDIATAAA---------------------------KPGITTDELDRIV 103 (337)
T ss_dssp CCCCCCTTTTCTTC--CHHHHHHHHHHHHHHHHHHHHHHC---------------------------CTTCBHHHHHHHH
T ss_pred cccccchhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHc---------------------------cCCCCHHHHHHHH
Confidence 3445677789999999999999999999999998887764 8999999999998
Q ss_pred HHHHHhhcC----CCCCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHH
Q 006890 378 ESFRASKEH----FRGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKA 453 (627)
Q Consensus 378 ~~~~~~~~g----~~~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~ 453 (627)
+++...... ....+|++++++|.|++++|+.|++ ++|++||+|++|+|+.|+||++|+||||++|++++++++
T Consensus 104 ~~~~~~~g~~~~~~~~~~fp~iv~~g~n~~~~H~~~~~---~~l~~GD~v~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~ 180 (337)
T 4fuk_A 104 HEATVERNMYPSPLNYYGFPKSVCTSVNEVICHGIPDS---RELEEGDILNIDVSSYLNGFHGDLNETVFIGRPDDDSVR 180 (337)
T ss_dssp HHHHHHTTCEETTTTGGGCCSSSEEEETTEEECCCCCS---CBCCTTCEEEEEEEEEETTEEEEEEEEEESSSCCHHHHH
T ss_pred HHHHHHcCCCccCCCCCCcCceeeccccccccCCCCCC---ccccCCCEEEEecceeECCEEEeeeeeEEeCCccHHHHH
Confidence 876643322 2346899999999999999999986 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCC-CCcccccccccccCccccCCCcCCCCC--CCCcccCCcEE
Q 006890 454 CYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGL-DYRHGTGHGVGSYLNVHEGPQSISFKP--RNVPIHASMTA 530 (627)
Q Consensus 454 ~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~-~~~h~~GHgvG~~l~vhE~P~~~~~~~--~~~~l~~Gmv~ 530 (627)
+|+.+++++.+++++++| |+++++++.++++.+.+.|+ .+.|++||||| +.+||.|.+..... +..+|+|||||
T Consensus 181 l~~~v~ea~~~ai~~~kp-G~~~~di~~~~~~~~~~~g~~~~~~~~GHGIG--~~~he~p~~~~~~~~~~~~~L~~GMV~ 257 (337)
T 4fuk_A 181 LVHAAYECLCAGIGVVKP-EALYKQVGDAIEACASQYQCSVVRTYTGHGVG--HLFHTSPTVCHYANNKSLGMMRPGHVF 257 (337)
T ss_dssp HHHHHHHHHHHHHTTCST-TCBTTHHHHHHHHHHHTTTCEECSSEEEEECS--SSSSEEEEECCSCC---CCBCCTTCEE
T ss_pred HHHHHHHHHHHHHhhccc-cccHHHHHHHHHHHHHHhcCCcccCcccCCCC--CccccCCcccccccCCCCCEeCCCCEE
Confidence 999999999999999998 99999999999999999998 57899999999 99999988754432 45789999999
Q ss_pred eeCceeeec-----------------CccEEEEeEeeEEecCCcccccCCcceeeeeccccccc
Q 006890 531 TDEPGYYED-----------------GNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPY 577 (627)
Q Consensus 531 siEPg~y~~-----------------~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~~p~ 577 (627)
|||||+|.+ |.+|+||||+|+||++|+ |+||..|.
T Consensus 258 TIEPgiy~~~~~~~~~~D~wt~~t~dg~~gvriEd~VlVTe~G~------------EvLT~~p~ 309 (337)
T 4fuk_A 258 TIEPMINLGTWQDVTWPDKWTSTTKDGRRSAQFEHTMVVTNGGV------------EIFTDWVD 309 (337)
T ss_dssp EECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEEEECSSSE------------EESSCCSS
T ss_pred EECCeeEcCCCcceEcCCCCeEEecCCceEEEeccEEEEcCCcC------------EECCCCCC
Confidence 999999974 567999999999999998 99997654
No 28
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=100.00 E-value=1.2e-39 Score=348.21 Aligned_cols=249 Identities=12% Similarity=0.143 Sum_probs=206.9
Q ss_pred ccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHH
Q 006890 303 PLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRA 382 (627)
Q Consensus 303 ~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~ 382 (627)
-+..+|+|||++||+.||+|+++++.++..+...+ +||+||.||++.+++++.
T Consensus 12 ~v~~~r~iKs~~EI~~mR~A~~i~~~~l~~~~~~i---------------------------kpGvte~el~~~~~~~i~ 64 (401)
T 2q8k_A 12 DEQQEQTIAEDLVVTKYKMGGDIANRVLRSLVEAS---------------------------SSGVSVLSLCEKGDAMIM 64 (401)
T ss_dssp --CCCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------C-CCBHHHHHHHHHHHHH
T ss_pred cHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhc---------------------------cCCCcHHHHHHHHHHHHH
Confidence 46789999999999999999999999988776653 799999999999988664
Q ss_pred hhc---------CCCCCcCCcccccCCCcccccccCCCC-ccCCCCCCCeEEEeecceecCcccceEEEEecC-----CC
Q 006890 383 SKE---------HFRGLSFPTISSVGPNAAIMHYSPQSE-TCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFG-----KP 447 (627)
Q Consensus 383 ~~~---------g~~~~~f~~i~~~G~n~a~~h~~~~~~-~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G-----~p 447 (627)
... .+.+.+|+++++ .|.+++||.|.++ .+++|++||+|+||+|++|+||++|+||||++| +|
T Consensus 65 ~~ga~~~~~~~~~~~g~~f~~~vS--~N~~v~H~~P~~~d~~~~L~~GDiV~ID~G~~~~GY~sD~tRT~~vG~~~eg~~ 142 (401)
T 2q8k_A 65 EETGKIFKKEKEMKKGIAFPTSIS--VNNCVCHFSPLKSDQDYILKEGDLVKIDLGVHVDGFIANVAHTFVVDVAQGTQV 142 (401)
T ss_dssp HHHHTSSTTCTTCCEEEEEEEEEE--ETTEEECCCCCTTSCCCBCCTTCEEEEEEEEEETTEEEEEEEEEETTCC-CCCB
T ss_pred HcCChhhcccccccCCCCCCcEEe--CCcccccCCCCCCCCCcccCCCCEEEEEEEEEECCEEEEEEEEEEECCccCCCC
Confidence 321 234567766554 8999999999433 248999999999999999999999999999999 89
Q ss_pred CHHHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC-CcccccccccccCccccCCC--cCCCC------
Q 006890 448 SAHEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRHGTGHGVGSYLNVHEGPQ--SISFK------ 518 (627)
Q Consensus 448 ~~e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h~~GHgvG~~l~vhE~P~--~~~~~------ 518 (627)
+++++++|+++++++.+++++++| |+++++|+.+++++++++|+. +.+.+||||| +.+||.|. +..+.
T Consensus 143 s~~~~~l~~~~~~a~~~~i~~~kP-G~~~~dI~~ai~~~~~~~G~~~v~~~~GHGIG--~~~HE~P~~i~~~~~~~~~~~ 219 (401)
T 2q8k_A 143 TGRKADVIKAAHLCAEAALRLVKP-GNQNTQVTEAWNKVAHSFNCTPIEGMLSHQLK--QHVIDGEKTIIQNPTDQQKKD 219 (401)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCST-TCBHHHHHHHHHHHHHTTTCEECTTCEEEEEB--TTBSSCSCEEESSCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHcCCeecCCcccccCC--CccccCCcccccCCCcccccC
Confidence 999999999999999999999998 999999999999999999994 5688999999 99999996 22221
Q ss_pred CCCCcccCCcEEeeCceeee------------------------------------------------------------
Q 006890 519 PRNVPIHASMTATDEPGYYE------------------------------------------------------------ 538 (627)
Q Consensus 519 ~~~~~l~~Gmv~siEPg~y~------------------------------------------------------------ 538 (627)
..+.+|++||||+||||++.
T Consensus 220 ~~~~~L~~GmV~tIEP~i~~G~g~v~~~~~~~t~y~~~~~~~~~lk~~~sr~~l~~i~~~~~~~pF~~r~l~~~~~~~~g 299 (401)
T 2q8k_A 220 HEKAEFEVHEVYAVDVLVSSGEGKAKDAGQRTTIYKRDPSKQYGLKMKTSRAFFSEVERRFDAMPFTLRAFEDEKKARMG 299 (401)
T ss_dssp SCCCBCCTTCEEEEEEEEESSCCCCEECSCCCCEEEECTTCCCCCSSHHHHHHHHHHHHHHTTSCEEGGGCC--HHHHHH
T ss_pred CCCCEeCCCCEEEEeCceEecCCEEEECCCCceEEeeccccccccccHHHHHHHHHHHHhCCCCccchhhhCcchhHHHH
Confidence 03578999999999999972
Q ss_pred -------------------cCccEEEEeEeeEEecCCcccccCCcceeeeecccccccccccc--cccCCCHHHHH-HHH
Q 006890 539 -------------------DGNFGIRLENVLVVTDANTKFNFGDKGYLSFEHITWAPYQIKMI--NLKSLTPEEID-WLN 596 (627)
Q Consensus 539 -------------------~~~~GvriEd~v~V~~~g~~~~~~~~~~~~fe~lT~~p~~~~~i--~~~~l~~~e~~-~ln 596 (627)
+|.+..++|+||+||++|+ +.||..|++++.+ +++ ++++|+. +|.
T Consensus 300 ~~e~~~~~~l~~~~vl~t~dg~~~Aq~EhTvlvt~~G~------------eilT~~~~~~~~~~s~~~-~~d~e~~~~l~ 366 (401)
T 2q8k_A 300 VVECAKHELLQPFNVLYEKEGEFVAQFKFTVLLMPNGP------------MRITSGPFEPDLYKSEME-VQDAELKALLQ 366 (401)
T ss_dssp HHHHHHTTSEEEECCEECCTTCCEEEEEEEEEEETTEE------------EECCCCCCCGGGBCCSCC-CCCHHHHHHHH
T ss_pred HHHHHHcCCccCCCceEeeCCCEEEEEEEEEEECCCCc------------EEecCCCCCHhhccCCCc-cCcHHHHHHHh
Confidence 1345589999999999997 9999999988888 333 4445543 553
No 29
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=100.00 E-value=6.7e-37 Score=314.93 Aligned_cols=200 Identities=16% Similarity=0.086 Sum_probs=177.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCCCcCC
Q 006890 314 VELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRGLSFP 393 (627)
Q Consensus 314 ~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~~~f~ 393 (627)
+||+.||+|+++++.++..+++++ +||+||.|+++.++.++.+ .|. .++|+
T Consensus 1 eEI~~mr~A~~i~~~~l~~~~~~i---------------------------~pG~te~el~~~~~~~~~~-~G~-~~~fp 51 (295)
T 1xgs_A 1 MDTEKLMKAGEIAKKVREKAIKLA---------------------------RPGMLLLELAESIEKMIME-LGG-KPAFP 51 (295)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHC---------------------------CTTCBHHHHHHHHHHHHHH-TTC-EESSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHC---------------------------CCCCCHHHHHHHHHHHHHH-cCC-CCCCC
Confidence 489999999999999999887764 7999999999999998754 344 37899
Q ss_pred cccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHHHhccCCCC
Q 006890 394 TISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIALGNAVFPNG 473 (627)
Q Consensus 394 ~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~~~~~~p~G 473 (627)
++++ .|..++||.|+..++++|++||+|++|+|++|+||++|+||||++|+ +++++|+++++++.+++++++| |
T Consensus 52 ~~vs--~n~~~~H~~p~~~~~~~L~~GDiv~iD~G~~~~GY~sD~tRT~~vG~---~~~~l~~~~~~a~~~~i~~~kp-G 125 (295)
T 1xgs_A 52 VNLS--INEIAAHYTPYKGDTTVLKEGDYLKIDVGVHIDGFIADTAVTVRVGM---EEDELMEAAKEALNAAISVARA-G 125 (295)
T ss_dssp CEEE--ETTEEECCCCCTTCCCBCCTTCEEEEEEEEEETTEEEEEEEEEETTS---CCCHHHHHHHHHHHHHHHHCST-T
T ss_pred cEEe--eCCccccccCCCCCCccccCCCEEEEEEeEEECCEEEEEEEEEEeCH---HHHHHHHHHHHHHHHHHHHhCC-C
Confidence 8876 46778999998545689999999999999999999999999999997 7899999999999999999998 9
Q ss_pred cccchHHHHHHHHHHHcCCC-CcccccccccccCccccCCCcCCCCC-C-CCcccCCcEEeeCceeeecCccEEEEeEee
Q 006890 474 TCGHTLDILARLPLWKYGLD-YRHGTGHGVGSYLNVHEGPQSISFKP-R-NVPIHASMTATDEPGYYEDGNFGIRLENVL 550 (627)
Q Consensus 474 ~~~~~l~~~a~~~l~~~G~~-~~h~~GHgvG~~l~vhE~P~~~~~~~-~-~~~l~~Gmv~siEPg~y~~~~~GvriEd~v 550 (627)
+++++|+.++++++++.|+. +.|++|||||. +++||+|.+....+ + +.+|+|||||+|||++| +|.++||+||..
T Consensus 126 ~~~~dI~~a~~~~~~~~G~~~~~~~~GHgIG~-l~~He~p~ip~~~~~~~~~~L~~GmV~tIEP~i~-~G~g~v~~~~~~ 203 (295)
T 1xgs_A 126 VEIKELGKAIENEIRKRGFKPIVNLSGHKIER-YKLHAGISIPNIYRPHDNYVLKEGDVFAIEPFAT-IGAGQVIEVPPT 203 (295)
T ss_dssp CBTHHHHHHHHHHHHTTTCEECTTCCEEECBT-TBSSCSCEECSSCCTTCCCBCCTTCEEEECCEEE-SSCSCEEEEEEE
T ss_pred CcHHHHHHHHHHHHHHCCCeEECCCcCCCCCC-cccCCCCcCCccCCCCCCCEeCCCCEEEEcceeE-CCCCEEEECCce
Confidence 99999999999999999995 78999999985 59999998754432 4 78999999999999999 899999999743
No 30
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A*
Probab=100.00 E-value=7.6e-36 Score=321.60 Aligned_cols=207 Identities=17% Similarity=0.210 Sum_probs=176.1
Q ss_pred hhhhc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHh
Q 006890 306 LAKAI--KNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRAS 383 (627)
Q Consensus 306 ~~r~i--K~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~ 383 (627)
.+|++ ||++||+.||+|++++..++..+...+ +||+||.||++.++..+..
T Consensus 154 elR~i~iKs~~EIe~mR~A~~Ia~~al~~~~~~i---------------------------kpGvTe~ELa~~le~~~~~ 206 (478)
T 1b6a_A 154 EKKALDQASEEIWNDFREAAEAHRQVRKYVMSWI---------------------------KPGMTMIEICEKLEDCSRK 206 (478)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------CTTSBHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCHHHHHHHHHHHHHHHHHHHHHhhhc---------------------------CCCCcHHHHHHHHHHHHHH
Confidence 44554 999999999999999999988877653 7999999999998876532
Q ss_pred ---hcCC-CCCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHH
Q 006890 384 ---KEHF-RGLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVL 459 (627)
Q Consensus 384 ---~~g~-~~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~ 459 (627)
..|. .+.+|+++++. |..++||.|+.+.+++|++||+|+||+|++|+||++|+||||++| ++++++|++++
T Consensus 207 ~i~~~Ga~~g~~FP~ivSv--N~~v~Hg~P~~~d~r~Lk~GDiV~ID~G~~~dGY~sD~tRT~~Vg---~e~~~L~eav~ 281 (478)
T 1b6a_A 207 LIKENGLNAGLAFPTGCSL--NNCAAHYTPNAGDTTVLQYDDICKIDFGTHISGRIIDCAFTVTFN---PKYDTLLKAVK 281 (478)
T ss_dssp HHTCBTTTEEEEEEEEEEE--TTEEECCCCCTTCCCBCCTTCCEEEEEEEEETTEEEEEEEEECSS---GGGHHHHHHHH
T ss_pred HHHhcCCcccCCCCeEEEC--CCccccCCCCcccCccccCCCeEEEEEEEEECCEEEEEEEEEEeC---HHHHHHHHHHH
Confidence 2343 45689988764 778899999743348999999999999999999999999999996 78999999999
Q ss_pred HHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC----------Ccccccccc-cccCccccCCCcCCCCC-CCCcccCC
Q 006890 460 KGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD----------YRHGTGHGV-GSYLNVHEGPQSISFKP-RNVPIHAS 527 (627)
Q Consensus 460 ~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~----------~~h~~GHgv-G~~l~vhE~P~~~~~~~-~~~~l~~G 527 (627)
+++.+++++++| |+++++|+.+++++++++|+. +.|++|||| | +.+||.|.+....+ +..+|++|
T Consensus 282 eA~~aaI~~~kP-G~~~~dI~~ai~~~i~~~G~~l~g~~~~~~~v~h~~GHGIGG--l~iHE~P~vP~~~~~~~~~Le~G 358 (478)
T 1b6a_A 282 DATNTGIKCAGI-DVRLCDVGEAIQEVMESYEVEIDGKTYQVKPIRNLNGHSIGQ--YRIHAGKTVPIVKGGEATRMEEG 358 (478)
T ss_dssp HHHHHHHHHCCT-TCBHHHHHHHHHHHHHTCEEEETTEEEECEECTTCEEEEEBT--TBSCCSCEEESSSSCCCCBCCTT
T ss_pred HHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCCcccccccceeecCcceeCCCC--ccccCCCccceecCCCCCEeCCC
Confidence 999999999997 999999999999999999973 689999999 7 89999886654433 57899999
Q ss_pred cEEeeCceeeecCccEEEEeEe
Q 006890 528 MTATDEPGYYEDGNFGIRLENV 549 (627)
Q Consensus 528 mv~siEPg~y~~~~~GvriEd~ 549 (627)
|||+|||++| .|. |+|+||.
T Consensus 359 MVftIEP~i~-~G~-G~~~ed~ 378 (478)
T 1b6a_A 359 EVYAIETFGS-TGK-GVVHDDM 378 (478)
T ss_dssp CEEEEEEEEE-SSC-SCCEECS
T ss_pred CEEEEeCeeE-CCC-CEEEECC
Confidence 9999999999 443 6677653
No 31
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=100.00 E-value=1e-35 Score=312.29 Aligned_cols=200 Identities=14% Similarity=0.085 Sum_probs=176.1
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcC---
Q 006890 310 IKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEH--- 386 (627)
Q Consensus 310 iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g--- 386 (627)
..|++||+.||+|+++++.++..+.+.+ +||+||.|+++.+++...+..+
T Consensus 41 ~~s~~EI~~mR~A~~I~~~a~~~~~~~i---------------------------kpG~te~El~~~ie~~~~~~g~~~~ 93 (360)
T 2nw5_A 41 FTESDILQDARRAAEAHRRARYRVQSIV---------------------------RPGITLLEIVRSIEDSTRTLLKGER 93 (360)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHC---------------------------CTTCBHHHHHHHHHHHHHHHTTTSG
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHhc---------------------------cCCCCHHHHHHHHHHHHHHhcCCCc
Confidence 3499999999999999999998877664 7999999999999887654433
Q ss_pred CCCCcCCcccccCCCcccccccCCCCc-cCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHHHHHHHHH
Q 006890 387 FRGLSFPTISSVGPNAAIMHYSPQSET-CAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAVLKGHIAL 465 (627)
Q Consensus 387 ~~~~~f~~i~~~G~n~a~~h~~~~~~~-~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v~~~~~~~ 465 (627)
..+.+|++++ |.|++++||.|+..+ +++|++||+|+||+|++|+||++|+||||++| ++++++|+++++|+.++
T Consensus 94 ~~~~aFpt~~--s~N~~~~H~~P~~~d~~~~L~~GDlV~ID~G~~~~GY~sD~tRT~~v~---~~~~~l~~av~eA~~aa 168 (360)
T 2nw5_A 94 NNGIGFPAGM--SMNSCAAHYTVNPGEQDIVLKEDDVLKIDFGTHSDGRIMDSAFTVAFK---ENLEPLLVAAREGTETG 168 (360)
T ss_dssp GGGEEEEEEE--EETTEEECCCCCTTCCCCBCCTTCEEEEEEEEEETTEEEEEEEEEECC---GGGHHHHHHHHHHHHHH
T ss_pred cCccccCcee--eccccccCCCCCcccCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEcC---HHHHHHHHHHHHHHHHH
Confidence 2356898864 689999999998543 58999999999999999999999999999995 68999999999999999
Q ss_pred HhccCCCCcccchHHHHHHHHHHHcCC----------CCcccccccccccC-ccccCCCcCCCCC-CCCcccCCcEEeeC
Q 006890 466 GNAVFPNGTCGHTLDILARLPLWKYGL----------DYRHGTGHGVGSYL-NVHEGPQSISFKP-RNVPIHASMTATDE 533 (627)
Q Consensus 466 ~~~~~p~G~~~~~l~~~a~~~l~~~G~----------~~~h~~GHgvG~~l-~vhE~P~~~~~~~-~~~~l~~Gmv~siE 533 (627)
+++++| |+++++|+.++++++.++|+ .+.|.+||||| + .+||+|.+....+ ++.+|++||||+||
T Consensus 169 i~~~kP-Gv~~~dI~~ai~~vi~~~G~~~~g~~~~~~~v~~~~GHgIG--~y~iHe~P~I~~~~~~~~~~Le~GmV~aIE 245 (360)
T 2nw5_A 169 IKSLGV-DVRVCDIGRDINEVISSYEVEIGGRMWPIRPISDLHGHSIS--QFRIHGGISIPAVNNRDTTRIKGDSFYAVE 245 (360)
T ss_dssp HHHCCT-TCBHHHHHHHHHHHHTTCEEECSSSEEECEECTTCCEEEEB--TTBSCCSCEECSSCCCCCCBCCSSEEEEEE
T ss_pred HHHhcC-CCcHHHHHHHHHHHHHHcCCccccccccccccCCeeEeeec--CceeccCCEeccccCCCCcEEeCCcEEEEe
Confidence 999998 99999999999999999985 25699999999 8 9999998854333 67899999999999
Q ss_pred ceeeecCccEEE
Q 006890 534 PGYYEDGNFGIR 545 (627)
Q Consensus 534 Pg~y~~~~~Gvr 545 (627)
|++| +|.++||
T Consensus 246 P~i~-~G~G~Vr 256 (360)
T 2nw5_A 246 TFAT-TGKGSID 256 (360)
T ss_dssp EEEE-SSCSCCE
T ss_pred ceEE-CCcceEE
Confidence 9999 8999998
No 32
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=99.97 E-value=3.4e-30 Score=271.47 Aligned_cols=201 Identities=13% Similarity=0.091 Sum_probs=164.7
Q ss_pred ccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHH
Q 006890 303 PLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRA 382 (627)
Q Consensus 303 ~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~ 382 (627)
-...+|.+|+++||+.||+|++++.+++..+..++ +||+|+.||++.++++..
T Consensus 32 ~~~~~~~~~~~d~l~~~R~Aa~I~~~v~~~~~~~i---------------------------kpG~t~~el~~~~e~~i~ 84 (358)
T 3fm3_A 32 RNMEIENFTESDILQDARRAAEAHRRARYRVQSIV---------------------------RPGITLLEIVRSIEDSTR 84 (358)
T ss_dssp TSCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHC---------------------------CTTCBHHHHHHHHHHHHH
T ss_pred hHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhC---------------------------CCCCcHHHHHHHHHHHHH
Confidence 35779999999999999999999999998876664 899999999999988664
Q ss_pred hh---cCCCCCcCCcccccCCCcccccccCCCC-ccCCCCCCCeEEEeecceecCcccceEEEEecCCCCHHHHHHHHHH
Q 006890 383 SK---EHFRGLSFPTISSVGPNAAIMHYSPQSE-TCAEMDPNSIYLCDSGAQYQDGTTDITRTFHFGKPSAHEKACYTAV 458 (627)
Q Consensus 383 ~~---~g~~~~~f~~i~~~G~n~a~~h~~~~~~-~~~~l~~gd~vliD~g~~y~gy~~D~tRT~~~G~p~~e~~~~y~~v 458 (627)
.. ..+.+.+|++.++ .|..++||.|+.. ++++|++||+|.||+|+.|+||++|+|||+.+|+..+ +++..+
T Consensus 85 ~~~~~~~~~g~~FP~ciS--vN~~v~Hg~P~~~~~~~~L~~GDiV~ID~G~~~dGY~sD~arT~~vg~~~~---~l~~~~ 159 (358)
T 3fm3_A 85 TLLKGERNNGIGFPAGMS--MNSCAAHYTVNPGEQDIVLKEDDVLKIDFGTHSDGRIMDSAFTVAFKENLE---PLLVAA 159 (358)
T ss_dssp HHTTTSGGGGEEEEEEEE--ETTEEECCCCCTTCCCCBCCTTCEEEEEEEEEETTEEEEEEEEEECCGGGH---HHHHHH
T ss_pred HhcCCCcccCCCCCcEEe--eCCEEEecCCCCCCCCeEecCCCEEEEEeeEEECCEEEEEEEeccccccch---hHHHHH
Confidence 32 2234568886554 5777889999642 3589999999999999999999999999999996554 456777
Q ss_pred HHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC----------CcccccccccccCccccCCCcCCCCC-CCCcccCC
Q 006890 459 LKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD----------YRHGTGHGVGSYLNVHEGPQSISFKP-RNVPIHAS 527 (627)
Q Consensus 459 ~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~----------~~h~~GHgvG~~l~vhE~P~~~~~~~-~~~~l~~G 527 (627)
.+++.+++++++| |++..++..++++++.+.|+. +.+.+|||||++ ..||.|.+....+ ...+|++|
T Consensus 160 ~~al~aai~~~~p-G~~~~dig~ai~~v~~~~~~~v~~~~~~~~~v~~~~GHgiG~~-~~he~~~ip~~~~~~~~~le~G 237 (358)
T 3fm3_A 160 REGTETGIKSLGV-DVRVCDIGRDINEVISSYEVEIGGRMWPIRPISDLHGHSISQF-RIHGGISIPAVNNRDTTRIKGD 237 (358)
T ss_dssp HHHHHHHHHHCCT-TCBHHHHHHHHHHHHTTCEEECSSSEEECEECTTCCEEEEBTT-BSCCSCEECSSCCCCCCBCCSS
T ss_pred HHHHHHHHHhhhc-CCccccccHHHHHHHhhccceeccccccccccccccccccCCc-cccCCCccCccCCCCCcEEeee
Confidence 8888899999997 999999999999999988752 356789999954 4588877655443 56789999
Q ss_pred cEEeeCceee
Q 006890 528 MTATDEPGYY 537 (627)
Q Consensus 528 mv~siEPg~y 537 (627)
|||+|||.+.
T Consensus 238 mV~tIEP~is 247 (358)
T 3fm3_A 238 SFYAVETFAT 247 (358)
T ss_dssp EEEEEEEEEE
T ss_pred eeEEeeeeee
Confidence 9999999763
No 33
>3qoc_A Putative metallopeptidase; MCSG, PSI-2, structural genomics, midwest center for structu genomics, hydrolase; HET: MSE; 2.15A {Corynebacterium diphtheriae}
Probab=99.90 E-value=3.9e-24 Score=194.47 Aligned_cols=124 Identities=19% Similarity=0.317 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccCceEEEEe-CCceEEEEcchhHHHHhccccC
Q 006890 2 AEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALIT-MNEALLWTDGRYFLQATQELTG 80 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs~g~~vvt-~~~a~l~tD~RY~~qA~~~~~~ 80 (627)
++|+++||+.|+++| +||+||+++ .|++|||||+||+|++||+ +++++||||+||++||++|++
T Consensus 11 ~~Rl~~l~~~m~~~~--~da~li~~~------------~n~~yltGf~~s~g~lvv~~~~~a~l~td~Ry~~qA~~~~~- 75 (135)
T 3qoc_A 11 LQRRRALSAQLAAKR--IDAMLVTHL------------THIRYLSGFTGSNAALIINKDLSARISTDGRYITQIAEQVP- 75 (135)
T ss_dssp HHHHHHHHHTHHHHT--CSEEEECCH------------HHHHHHHCCCSSCCEEEEETTSCEEEEECGGGHHHHHHHCT-
T ss_pred HHHHHHHHHHHHHCC--CCEEEEcCh------------hhCeeeecccCCCeEEEEeeCCccEEEeCcHHHHHHHHhCC-
Confidence 579999999999987 999999988 8999999999999999999 889999999999999999987
Q ss_pred cEEEEEcCCCCCHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhh
Q 006890 81 EWKLMRMLEDPAVDVWMANNLPNDAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVW 145 (627)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~l~~~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr 145 (627)
+++++..+ ...+|+.+.+...++||||++.+|++.+++|++.++. +++++++ +++|+++|
T Consensus 76 ~~~i~~~~---~~~~~l~~~~~~~~~vG~e~~~ls~~~~~~L~~~l~~-~~~lv~~-~~~v~~lR 135 (135)
T 3qoc_A 76 DIESLMAR---NCAPALLSDINGPKRVGFEADYLSVSQCEELRKSAGS-DVELIPV-TGAIEKLR 135 (135)
T ss_dssp TSEEEECS---SHHHHHHHTCCSSEEEEEETTTSBHHHHHHHHHHSCT-TEEEEEE-CSCC----
T ss_pred CcEEEEeC---cHHHHHHhcCcCCCeEEECCCcccHHHHHHHHHhccC-CcEEEEC-ccHHHHhC
Confidence 47888754 2457888877677899999999999999999998743 3789998 89999887
No 34
>3il0_A Aminopeptidase P; XAA-Pro aminopeptidase; structural genomics MCSG, protein structure initiative, midwest center for STRU genomics; HET: GOL; 2.20A {Streptococcus thermophilus}
Probab=99.89 E-value=2.8e-23 Score=187.84 Aligned_cols=126 Identities=25% Similarity=0.337 Sum_probs=109.7
Q ss_pred CHHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccCceEEEEeCCceEEEEcchhHHHHhccccC
Q 006890 1 MAEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMNEALLWTDGRYFLQATQELTG 80 (627)
Q Consensus 1 ~~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs~g~~vvt~~~a~l~tD~RY~~qA~~~~~~ 80 (627)
|++|+++||+.|+++| +||+||+++ .|++|||||+|++|+++|+.++++||||+||++||+++++.
T Consensus 4 ~~~Rl~~lr~~m~~~~--~da~li~~~------------~ni~YltGf~~~~~~llv~~~~~~l~~d~r~~~~a~~~~~~ 69 (131)
T 3il0_A 4 MQRRLERFDAKLVQSG--LDALLVTGQ------------NNIYYLTDFWGTNATVFITKNRRLFLTDSRYTLIAKQSVHG 69 (131)
T ss_dssp GGGHHHHHHHHHHHHT--CSEEEECSH------------HHHHHHHSCCCSSEEEEEESSCEEEEECTTSHHHHHHHCCS
T ss_pred HHHHHHHHHHHHHHcC--CCEEEEecc------------cccEEEeCcccCCeEEEEECCCCEEEECchhHHHHHHhCCC
Confidence 5789999999999997 999999999 89999999999999999999999999999999999998863
Q ss_pred cEEEEEcCCCCCHHHHHHhhCCCC--CEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhhcC
Q 006890 81 EWKLMRMLEDPAVDVWMANNLPND--AAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNR 148 (627)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~l~~~--~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~~k 148 (627)
++++.+ +++.+|+.+.+++. ++||||++ +|+..+++|++.+ .++++++. +++|+.+|++|
T Consensus 70 -~~v~~~---~~~~~~l~~~l~~~~~~~ig~e~~-~~~~~~~~L~~~~--~~~~~v~~-~~~v~~lR~iK 131 (131)
T 3il0_A 70 -FDIIES---KDPLKDIVKFVEVDKLETIGFDNQ-VSFAYYQALQAIF--EGYTLSPQ-TNFMEELRMIK 131 (131)
T ss_dssp -SEEEEC---SCHHHHHHHHHHHTTCCEEEEETT-SCHHHHHHHHHHT--TTSEEEEE-SSHHHHHHC--
T ss_pred -cEEEEe---CCHHHHHHHHHHhcCCCEEEEcCC-CCHHHHHHHHhhc--CCCEEEEC-chHHHHhccCC
Confidence 677765 23557787776544 78999999 9999999999987 35799998 89999999987
No 35
>3ovk_A Aminopeptidase P, XAA-Pro dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.00A {Streptococcus pyogenes}
Probab=99.87 E-value=2.1e-22 Score=182.41 Aligned_cols=122 Identities=25% Similarity=0.376 Sum_probs=106.4
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccCceEEEEeCCceEEEEcchhHHHHhccccCc
Q 006890 2 AEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMNEALLWTDGRYFLQATQELTGE 81 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs~g~~vvt~~~a~l~tD~RY~~qA~~~~~~~ 81 (627)
++|+++||+.|+++| +||+||+++ .|++|||||+||+|++||++++++||||+||++||++++++
T Consensus 9 ~~Rl~~l~~~m~~~~--~da~li~~~------------~n~~YltGf~~~~~~~vv~~~~~~l~td~ry~~qa~~~~~~- 73 (132)
T 3ovk_A 9 EQRLGHCLRQMAEKG--LEALLVTHL------------TNSYYLTGFSGTAATVLITAKRRVLITDSRYTLLAKASVEG- 73 (132)
T ss_dssp HHHHHHHHHHHHHHT--CCEEEECSH------------HHHHHHHCCCCSCCEEEEESSCEEEEECTTTHHHHHHHCTT-
T ss_pred HHHHHHHHHHHHHCC--CCEEEEcCc------------ccceeeeCccCCCEEEEEECCccEEEECchhHHHHHHhCCC-
Confidence 589999999999997 999999999 89999999999999999999999999999999999999875
Q ss_pred EEEEEcCCCCCHHHHHHhhCC--CCCEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhh
Q 006890 82 WKLMRMLEDPAVDVWMANNLP--NDAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVW 145 (627)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~l~--~~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr 145 (627)
++++.+.+ + + +++.+.++ +.++||||++ +|+..+++|++.++ +.+++++ +++|+.+|
T Consensus 74 ~~v~~~~~-~-~-~~l~~~l~~~~~~~ig~e~~-~~~~~~~~L~~~l~--~~~~v~~-~~~v~~lR 132 (132)
T 3ovk_A 74 FDIIESRT-P-L-KVVAELLEADQIDCLGFEDQ-VSFSFYQAMQAELS--GITLLAQ-SGFVEHLR 132 (132)
T ss_dssp CEEEECSC-H-H-HHHHHHHHHHTCCEEEEETT-SBHHHHHHHHHHCT--TCEEEEE-SSTTGGGC
T ss_pred cEEEEeCC-C-H-HHHHHHHHHcCCCEEEEcCC-CCHHHHHHHHhhCC--CCeEEEC-chHHHHhC
Confidence 67776643 2 2 55665554 3579999999 99999999999874 4799998 89999887
No 36
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}
Probab=99.86 E-value=4.2e-22 Score=211.01 Aligned_cols=321 Identities=19% Similarity=0.264 Sum_probs=211.4
Q ss_pred CHHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccCceEEEEeCCceEEEEcchhHHHHhccccC
Q 006890 1 MAEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMNEALLWTDGRYFLQATQELTG 80 (627)
Q Consensus 1 ~~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs~g~~vvt~~~a~l~tD~RY~~qA~~~~~~ 80 (627)
|++||++||+.|++++ +||+||+++ .|++|||||+|+.|+++|++++++||||+||.+||+++++.
T Consensus 3 ~~~Rl~~lr~~m~~~g--iDa~lI~~~------------~ni~YLtGf~g~~~~llvt~~~~~l~~d~r~~~~a~~~~~~ 68 (356)
T 3q6d_A 3 AMEKIERLRSAFDEAG--IDGILLTNE------------HSRRYMANFTGTAGVVLISKKRAQFITDFRYVEQASKQAVG 68 (356)
T ss_dssp HHHHHHHHHTTHHHHT--CSEEEECCH------------HHHHHHHCCCSSSCEEEEESSCEEEEECGGGHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHHcC--CCEEEECCh------------hhceEccCCCCCCeEEEEECCCeEEEEChhhHHHHHhhCCC
Confidence 4689999999999987 999999999 89999999999999999999999999999999999988764
Q ss_pred cEEEEEcCCCCCHHHHHHhhCC--CCCEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhhcCCCCCCCcccc
Q 006890 81 EWKLMRMLEDPAVDVWMANNLP--NDAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNRPPVETYPVTV 158 (627)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~l~--~~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~~k~~~e~~~i~~ 158 (627)
++++.+.++ +.+++.+.++ ..++||+|++.+|+..++.|++.++ + ++++. ++++..+|.+|++.|
T Consensus 69 -~~v~~~~~~--~~~~l~~~l~~~~~~~igve~~~~~~~~~~~l~~~~~--~-~~~~~-~~~~~~~R~iK~~~E------ 135 (356)
T 3q6d_A 69 -YEIVQHAGL--IIDEVAKQVKELGIQKLGFEQDTLTYSSYSAHKEAID--A-EFIPT-SGLVEKLRLIKTDSE------ 135 (356)
T ss_dssp -SEEEECSSC--HHHHHHHHHHHHTCSEEEEETTTSBHHHHHHHHHHCC--S-EEEEE-CSHHHHHHTSCCHHH------
T ss_pred -CEEEEeCCC--HHHHHHHHHHhcCCceEEEcCccCCHHHHHHHhhhcc--c-ceecc-hhhhhhhccCCCHHH------
Confidence 566654332 4455665554 2478999999999999999998763 3 88888 899999999999998
Q ss_pred ccccccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECCceEEEEeCCCCCHHHHH
Q 006890 159 QQIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVIS 238 (627)
Q Consensus 159 ~~~~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~v~~~~~~~~~~~ 238 (627)
++.+|++.+.. +..+....+.+ .| .+++.++...++.
T Consensus 136 -------------i~~~r~A~~i~--~~~~~~~~~~i-------------~~---------------G~te~e~~~~~~~ 172 (356)
T 3q6d_A 136 -------------IKILKEAAQIA--DAAFEHILSFI-------------RP---------------GVSEIEVSNELEF 172 (356)
T ss_dssp -------------HHHHHHHHHHH--HHHHHHHTTTC-------------CT---------------TCBHHHHHHHHHH
T ss_pred -------------HHHHHHHHHHH--HHHHHHHHHHc-------------cC---------------CCCHHHHHHHHHH
Confidence 77777766442 11110001000 11 2455566666666
Q ss_pred hhhhCCeEEeeCCchhHHHHHHhhccCCC--CCCC-----CCCCEEEEcCCCCcHHHHhhcCCC--eEEecCCccchhhh
Q 006890 239 FLKESGVEVRDYDAVSSDVVLLQSNQLNP--PADV-----QGSDLIWADPNSCSYALYSKLNSD--KVLLQQSPLALAKA 309 (627)
Q Consensus 239 ~l~~~~v~v~~y~~~~~~~~~~~~~~l~~--~~~~-----~~~~~I~iD~~~~~~~~~~~l~~~--~~~~~~~~i~~~r~ 309 (627)
.+...|.+..+|+.+ ++++.+.+ |+.+ ..++.|.+|.+. .+ ...... ..+....+
T Consensus 173 ~~~~~g~~~~~f~~i------v~~g~n~~~~H~~~~~~~l~~gd~v~iD~g~-~~---~gy~sD~tRT~~~G~~------ 236 (356)
T 3q6d_A 173 FMRKQGATSSSFDII------VASGLRSALPHGVASEKVIETGDFVTLDFGA-YY---KGYCSDITRTIAVGEP------ 236 (356)
T ss_dssp HHHHTTCSEESSCCE------EEEGGGGGCTTCBCCSCBCCTTCEEEEEECE-EE---TTEECCEEEEEESSCC------
T ss_pred HHHHCCCCcCCCCCE------EEEcCccccCCCCCCCcccCCCCEEEEEEeE-EE---CCEEeeeEEEEEcCCC------
Confidence 666677777777765 33333332 3321 467888999762 11 111111 11111111
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCC
Q 006890 310 IKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRG 389 (627)
Q Consensus 310 iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~ 389 (627)
++ ..|++....-.++...++. .+||++-.++...+.+... ..|+.
T Consensus 237 --~~----~~~~~~~~v~~a~~~~~~~---------------------------~~pG~~~~~i~~~~~~~~~-~~g~~- 281 (356)
T 3q6d_A 237 --SD----KLKEIYNIVLEAQLRGVNG---------------------------IKAGLTGREADALTRDYIT-EKGYG- 281 (356)
T ss_dssp --CH----HHHHHHHHHHHHHHHHHHH---------------------------CCTTCBHHHHHHHHHHHHH-HTTCG-
T ss_pred --CH----HHHHHHHHHHHHHHHHHHH---------------------------hcCCCcHHHHHHHHHHHHH-HcCCc-
Confidence 22 2344444444555444443 3799999999999988764 34442
Q ss_pred CcCC--cccccCCCcccccccC--CCCccCCCCCCCeEEEeecceecC-cccceEEEEecC
Q 006890 390 LSFP--TISSVGPNAAIMHYSP--QSETCAEMDPNSIYLCDSGAQYQD-GTTDITRTFHFG 445 (627)
Q Consensus 390 ~~f~--~i~~~G~n~a~~h~~~--~~~~~~~l~~gd~vliD~g~~y~g-y~~D~tRT~~~G 445 (627)
..|. +--+.|-+ .|-.| +..++.+|++|.++.+..|....| +..-+.-|+.+.
T Consensus 282 ~~~~h~~GHgiGl~---~he~p~i~~~~~~~l~~Gmv~tiEPgiy~~g~~gvriEd~v~vt 339 (356)
T 3q6d_A 282 EYFGHSTGHGIGLE---IHEAPGLAFRSDTVLEPGMAVTVEPGIYIPGIGGVRIEDDIIVT 339 (356)
T ss_dssp GGCCSCSEEECSSS---SSEEEEESTTCCCBCCTTCEEEECCEEEETTTEEEECBEEEEEC
T ss_pred ccCCCCCcccCCCC---cCcCCCCCCCCCCCcCCCCEEEECCEEEECCCCeEEEccEEEEe
Confidence 2232 22233322 23222 112347899999999999876654 344566666664
No 37
>3pn9_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; 2.00A {Streptococcus pneumoniae}
Probab=99.83 E-value=6.3e-21 Score=173.85 Aligned_cols=128 Identities=13% Similarity=0.191 Sum_probs=109.5
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccCce----EEEEeCC-ceEEEEcchhHHHHhc
Q 006890 2 AEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAG----LALITMN-EALLWTDGRYFLQATQ 76 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs~g----~~vvt~~-~a~l~tD~RY~~qA~~ 76 (627)
++|+++||+.|+++| +||+||+++ .|++|||||+|+.+ +++|+.+ +++||||+||.+||+
T Consensus 4 ~~Rl~~lr~~m~~~~--~da~li~~~------------~ni~yltGf~g~~~er~~~lli~~~g~~~l~~d~~~~~~a~- 68 (138)
T 3pn9_A 4 MSKLQQILTYLESEK--LDVAVVSDP------------VTINYLTGFYSDPHERQMFLFVLADQEPLLFVPALEVERAS- 68 (138)
T ss_dssp CCHHHHHHHHHHHHT--CSEEEECCH------------HHHHHHHSCCCCCTTSCCEEEEESSSCCEEEEEGGGHHHHH-
T ss_pred HHHHHHHHHHHHHCC--CCEEEEcCc------------CceeeecCCCCCCccceEEEEEeCCCCEEEEEeccchhhhh-
Confidence 469999999999997 999999999 89999999999986 8899887 899999999999999
Q ss_pred cccCcEEEEEcCCCCCHHHHHHhhCCC--CCEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhhcC
Q 006890 77 ELTGEWKLMRMLEDPAVDVWMANNLPN--DAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNR 148 (627)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~~k 148 (627)
++.. ++++.+.+...+.+++.+.+++ .++||||++.+|+..++.|++.++ +.++++. +++|+.+|++|
T Consensus 69 ~~~~-~~v~~~~~~~~~~~~l~~~l~~~~~~~vg~e~~~~~~~~~~~l~~~~~--~~~~v~~-~~~i~~lR~iK 138 (138)
T 3pn9_A 69 STVS-FPVVGYVDSENPWQKIKHALPQLDFKRVAVEFDNLILTKYHGLKTVFE--TAEFDNL-TPRIQRMRLIK 138 (138)
T ss_dssp HHCS-SCEEEECTTSCHHHHHHHHSCCCCCCEEEECTTTCCHHHHHHHHHHST--TCEEEEC-HHHHHHHTTCC
T ss_pred ccCC-CcEEEEcCCCCHHHHHHHHHHhccCCeEEEecCcCCHHHHHHHHHHCC--CCeeeeh-HHHHHHHhhcC
Confidence 7653 3445444434456788888875 478999999999999999998874 4799998 89999999987
No 38
>3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metall peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis}
Probab=99.83 E-value=4.6e-21 Score=175.35 Aligned_cols=127 Identities=8% Similarity=0.167 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccCce----EEEEeCC-ceEEEEcchhHHHHhc
Q 006890 2 AEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAG----LALITMN-EALLWTDGRYFLQATQ 76 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs~g----~~vvt~~-~a~l~tD~RY~~qA~~ 76 (627)
++|+++||+.|+++| +||+||+++ .|++|||||+|+++ ++||+.+ +++||||+||.+||++
T Consensus 3 m~Rl~~l~~~m~~~g--lDa~li~~~------------~ni~YlTGf~~~~~er~~~llv~~~g~~~l~~~~~~~~~a~~ 68 (140)
T 3i7m_A 3 MTKLEQIQQWTAQHH--ASMTYLSNP------------KTIEYLTGFGSDPIERVLALVVFPDQDPFIFAPALEVEVIKE 68 (140)
T ss_dssp -CHHHHHHHHHHHTT--CSEEEECCH------------HHHHHHHCCCCCCCSSCCEEEECSSSCCEEEEEGGGHHHHHT
T ss_pred chHHHHHHHHHHHcC--CCEEEECCC------------CcceeecCCCCCCccceEEEEEeCCCCEEEEEecccHHHHHh
Confidence 459999999999998 999999999 99999999999987 8889876 6999999999999999
Q ss_pred cccCcEEEEEcCCCCCHHHHHHhhCCC----CCEEEEcCCCCCHHHHHHHHHHHHhcCCeEE-ecCcChhhHhhh
Q 006890 77 ELTGEWKLMRMLEDPAVDVWMANNLPN----DAAIGVDPWCVSIDTAQRWERAFAKKQQKLV-QTSTNLVDKVWK 146 (627)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~-~~~~~lid~lr~ 146 (627)
++.. .+++.+.+.....+++.+.+++ .++||||.+.+|+..+++|++.++ +.+++ ++ +++|+++|+
T Consensus 69 ~~~~-~~i~~~~d~~~~~~~l~~~l~~~~~~~~~ig~e~~~~~~~~~~~L~~~l~--~~~~v~~~-~~~i~~lR~ 139 (140)
T 3i7m_A 69 TGWQ-FPVIGYLDHENPWAMIADQVKQRHVNPEHVAIEKGQLQVARMEALAAQFS--APSFDLDI-TSFIEHMRG 139 (140)
T ss_dssp TTCC-SCEEEECTTSCHHHHHHHHHHHTTCCCSEEEECTTTSCHHHHHHHHTTSS--SCEEEEEC-HHHHHHC--
T ss_pred ccCc-CcEEEEcCCCCHHHHHHHHHHHhCCCCCeEEEccCCCCHHHHHHHHHHCC--CCEEecCH-HHHHHHHHc
Confidence 8753 2333333333344566655543 379999999999999999998873 47999 98 899999985
No 39
>3ooo_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; HET: MSE; 1.57A {Streptococcus agalactiae} PDB: 3peb_A*
Probab=99.82 E-value=2.5e-20 Score=168.60 Aligned_cols=124 Identities=13% Similarity=0.187 Sum_probs=105.3
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccCce----EEEEeCC-ceEEEEcchhHHHHhc
Q 006890 2 AEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAG----LALITMN-EALLWTDGRYFLQATQ 76 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs~g----~~vvt~~-~a~l~tD~RY~~qA~~ 76 (627)
++|+++||+.|+++| +||+||+++ .|++|||||+|+++ .++|+.+ +++||||+||.+||++
T Consensus 2 ~~Rl~~l~~~m~~~g--lDa~li~~~------------~ni~YlTGf~~~~~er~~~l~v~~~g~~~l~~~~~y~~~a~~ 67 (132)
T 3ooo_A 2 MSKLNRIRHHLHSVQ--AELAVFSDP------------VTVNYLTGFFCDPHERQMFLFVYEDRDPILFVPALEVSRAKQ 67 (132)
T ss_dssp CHHHHHHHHHHHHTT--CSEEEECCH------------HHHHHHHSCCCCCTTSCCEEEEESSSCCEEEEEGGGHHHHHH
T ss_pred chHHHHHHHHHHHCC--CCEEEEcCc------------chHHHHhCCCCCCCcceEEEEEeCCCCEEEEEeccchHHHHh
Confidence 479999999999997 999999999 99999999999986 8889876 5999999999999998
Q ss_pred cccCcEEEEEcCCCCCHHHHHHhhCCCC--CEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhh
Q 006890 77 ELTGEWKLMRMLEDPAVDVWMANNLPND--AAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVW 145 (627)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr 145 (627)
++ . .+++.+.+...+.+++.+.+++. ++||||++.+|+..+++|++.+ . .++++. +++|+++|
T Consensus 68 ~~-~-~~v~~~~d~~~~~~~l~~~l~~~~~~~ig~e~~~~~~~~~~~L~~~~--~-~~~~~~-~~~v~~lR 132 (132)
T 3ooo_A 68 SV-P-FPVFGYIDSENPWQKIASNLPSFSVSKVLAEFDNLNVTKFQGLQTVF--D-GHFENL-TPYIQNMR 132 (132)
T ss_dssp HC-S-SCEEEECTTSCHHHHHHHHCSCCCCSEEEECTTTCCHHHHHHHHHHC--C-SEEEEC-CHHHHTTC
T ss_pred cC-C-CcEEEEeCCCCHHHHHHHHHhhccCCeEEEecCCcCHHHHHHHHHhC--C-cceech-HHHHHhcC
Confidence 87 3 34444444344568898888764 5899999999999999999987 3 689998 88998876
No 40
>3o5v_A X-Pro dipeptidase; creatinase, N-terminal, PSI, MCSG, structural G midwest center for structural genomics; 1.85A {Streptococcus pyogenes m1 gas}
Probab=99.81 E-value=3.2e-20 Score=167.97 Aligned_cols=124 Identities=11% Similarity=0.182 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccCce----EEEEeCC-ceEEEEcchhHHHHhc
Q 006890 2 AEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAG----LALITMN-EALLWTDGRYFLQATQ 76 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs~g----~~vvt~~-~a~l~tD~RY~~qA~~ 76 (627)
++|+++||+.|+++| +||+||+++ .|++|||||+|+++ +++|+.+ +++||||+||.+||++
T Consensus 2 ~~Rl~~l~~~m~~~g--lDa~li~~~------------~ni~YltGf~~~~~er~~~l~v~~~g~~~l~~~~~y~~~a~~ 67 (132)
T 3o5v_A 2 NAKLDQIRLYLDQKG--AELAIFSDP------------VTINYLTGFFCDPHERQLFLFVYHDLAPVLFVPALEVARASQ 67 (132)
T ss_dssp CHHHHHHHHHHHHTT--CCEEEECCH------------HHHHHHHSCCCCCTTSCCEEEEESSSCCEEEEEGGGHHHHHH
T ss_pred hHHHHHHHHHHHHCC--CCEEEEcCc------------chhhHhhCCCCCCccceEEEEEeCCCCEEEEeehhhhHHHHh
Confidence 479999999999997 999999999 89999999999986 8999987 7999999999999998
Q ss_pred cccCcEEEEEcCCCCCHHHHHHhhCCCC--CEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhh
Q 006890 77 ELTGEWKLMRMLEDPAVDVWMANNLPND--AAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVW 145 (627)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr 145 (627)
++ . .+++.+.+.....+++.+.+++. ++||||++.+|+..+++|++.+ . .++++. +++|+++|
T Consensus 68 ~~-~-~~i~~~~d~~~~~~~l~~~l~~~~~~~ig~e~~~~~~~~~~~L~~~~--~-~~~~~~-~~~v~~lR 132 (132)
T 3o5v_A 68 AI-S-FPVFGYVDSENPWEKIKAVLPNTAAKTIYAEFDHLNVNKFHGLQTIF--S-GQFNNL-TPYVQGMR 132 (132)
T ss_dssp HC-C-SCEEEECTTSCHHHHHHHHCSCCCCSEEEECTTTCCHHHHHHHHTTC--C-SEEEEC-HHHHHTC-
T ss_pred cC-C-CcEEEEECCCCHHHHHHHHHhhccCCeEEEecCCCCHHHHHHHHHhC--C-Cceecc-HHHHHHhC
Confidence 87 3 34444444444567888888764 5899999999999999999876 3 689988 78888876
No 41
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=99.79 E-value=1.5e-19 Score=191.64 Aligned_cols=318 Identities=19% Similarity=0.274 Sum_probs=203.4
Q ss_pred HHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCcccccc-----ccccccccCceEEEEeCCceEEEEcchhHHHHhcc
Q 006890 3 EILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRR-----EFVSGFTGSAGLALITMNEALLWTDGRYFLQATQE 77 (627)
Q Consensus 3 ~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~-----~ylTGFtgs~g~~vvt~~~a~l~tD~RY~~qA~~~ 77 (627)
+|+++||+.|++++ +|++||+++ .|+ +|||||+++.+++||+++++.||+|+||..||+++
T Consensus 2 ~Rl~~Lr~~m~~~~--lDa~li~~~------------~ni~~~~~~YLtGf~~~~~~llI~~~~~~L~~d~r~~~~a~~~ 67 (359)
T 2zsg_A 2 DRSERLIQLISEEG--IDAFLIMNI------------ENSARASSVYFSGFTGSFSIILISENTRLLITDSRYTVQAKQE 67 (359)
T ss_dssp CCHHHHHHHHHTTT--CCEEEEEES------------TTTTHHHHHHHHCCCSSCEEEEEETTEEEEEECTTTHHHHHHH
T ss_pred hHHHHHHHHHHHCC--CcEEEEECh------------hHcccccCeeEeccCCCCEEEEEECCCCEEEECcccHHHHHhC
Confidence 58999999999987 999999998 567 99999999999999999999999999999999887
Q ss_pred ccCcEEEEEc-CCCCCHHHHHHhhCC--CCCEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhhcCCCCCCC
Q 006890 78 LTGEWKLMRM-LEDPAVDVWMANNLP--NDAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNRPPVETY 154 (627)
Q Consensus 78 ~~~~~~~~~~-~~~~~~~~~l~~~l~--~~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~~k~~~e~~ 154 (627)
. .++++.+ .+. +.+++.+.+. ..++||+|++.+++..++.|++.++ +.++++. +++|+.+|.+|++.|
T Consensus 68 -~-~~~v~~~~~~~--~~~~l~~~L~~~~~~~vgvd~~~~~~~~~~~l~~~l~--~~~~v~~-~~~i~~lr~iK~~~E-- 138 (359)
T 2zsg_A 68 -T-DFEVREVKGGD--FIDVLKKTVNDLKIKTIALEEERVSLSLFRRISSAFG--DRKFIGI-DDEVKQMRMVKDEGE-- 138 (359)
T ss_dssp -C-CSEEEEC---C--CHHHHHHHHHHTTCCEEEECGGGSBHHHHHHHHHHTT--TCEEEEC-HHHHHHHHHBCCHHH--
T ss_pred -C-CCEEEEecCcc--hHHHHHHHHHhcCCCEEEEeCCcCCHHHHHHHHhhCC--CcEEEEC-hhhhhhhhcCCCHHH--
Confidence 4 4666655 221 1244554443 2468999999999999999988763 2688888 799999999999998
Q ss_pred ccccccccccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECCceEEEEeCCCCCH
Q 006890 155 PVTVQQIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSS 234 (627)
Q Consensus 155 ~i~~~~~~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~v~~~~~~~ 234 (627)
++.+|++.+... ..+.... .|+ + | .+++.++..
T Consensus 139 -----------------i~~~r~a~~~~~--~~~~~~~---~~~---~-------~---------------G~te~e~~~ 171 (359)
T 2zsg_A 139 -----------------IEKIKQAIEISE--RAFLETV---QQI---R-------A---------------GMTEKEIAA 171 (359)
T ss_dssp -----------------HHHHHHHHHHHH--HHHHHHH---TTC---C-------T---------------TCBHHHHHH
T ss_pred -----------------HHHHHHHHHHHH--HHHHHHH---Hhc---c-------C---------------CCCHHHHHH
Confidence 777777654311 1110000 000 0 1 134555666
Q ss_pred HHHHhhhhCCeEEeeCCchhHHHHHHhhccCCC--CCCC-----CCCCEEEEcCCCCcHHHHhhcCCC--eEEecCCccc
Q 006890 235 EVISFLKESGVEVRDYDAVSSDVVLLQSNQLNP--PADV-----QGSDLIWADPNSCSYALYSKLNSD--KVLLQQSPLA 305 (627)
Q Consensus 235 ~~~~~l~~~~v~v~~y~~~~~~~~~~~~~~l~~--~~~~-----~~~~~I~iD~~~~~~~~~~~l~~~--~~~~~~~~i~ 305 (627)
.++..+...|..-.+|..+ ++++.+.+ |+.+ ..++.|.+|.+. .+ .....+ ..+....+
T Consensus 172 ~~~~~~~~~g~~~~~f~~i------v~~g~~~~~~h~~~~~~~l~~gd~v~iD~g~-~~---~gy~~D~tRt~~~G~~-- 239 (359)
T 2zsg_A 172 LLEYTMRKEGAEGVAFDTI------VASGCRSALPHGKASDKVVERGDVIVIDFGA-TY---ENYCADITRVVSIGEP-- 239 (359)
T ss_dssp HHHHHHHHTTCSEESSCCE------EEEGGGGGSTTCCCCSCBCCTTCEEEEEECE-EE---TTEECCEEEEEESSSC--
T ss_pred HHHHHHHHcCCCCCCCCCE------EEEccccccccCCCCCcccCCCCEEEEEEeE-EE---CCEEEeeeEEEEcCCC--
Confidence 6666666677766777766 34344333 3321 457888998762 11 111111 11111111
Q ss_pred hhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhc
Q 006890 306 LAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKE 385 (627)
Q Consensus 306 ~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~ 385 (627)
++ ..|++....-.++...++. .+||++-.++...+.+... ..
T Consensus 240 ------~~----~~~~~~~~v~~~~~~~~~~---------------------------~~pG~~~~~v~~~~~~~~~-~~ 281 (359)
T 2zsg_A 240 ------SD----EVKEVHSIVLEAQERALKI---------------------------AKAGVTGKLLDSVAREFIR-EK 281 (359)
T ss_dssp ------CH----HHHHHHHHHHHHHHHHHHH---------------------------CCTTCBHHHHHHHHHHHHH-HT
T ss_pred ------CH----HHHHHHHHHHHHHHHHHHH---------------------------ccCCCCHHHHHHHHHHHHH-Hc
Confidence 22 2345555555555554443 3799999999999988764 34
Q ss_pred CCCCCcCC--cccccCCCcccccccC--CCCccCCCCCCCeEEEeecceecCc-ccceEEEEec
Q 006890 386 HFRGLSFP--TISSVGPNAAIMHYSP--QSETCAEMDPNSIYLCDSGAQYQDG-TTDITRTFHF 444 (627)
Q Consensus 386 g~~~~~f~--~i~~~G~n~a~~h~~~--~~~~~~~l~~gd~vliD~g~~y~gy-~~D~tRT~~~ 444 (627)
|+. ..|. +--+.|-+ .|-.| +...+.+|++|-++.+..|....|. ..-+.-|+.+
T Consensus 282 g~~-~~~~h~~GHgiGl~---~he~p~i~~~~~~~l~~gmv~tiEPgiy~~~~~gvriEd~v~v 341 (359)
T 2zsg_A 282 GYG-EFFGHSLGHGIGLE---VHEGPAISFRNDSPLPENVVFTVEPGIYLEGKFGIRIEEDVVL 341 (359)
T ss_dssp TCG-GGBCSCSEEECSSS---SSEEEEESTTCCCBCCTTBEEEECCEEEETTTEEEECBEEEEE
T ss_pred CCc-ccCCCCCccccCcc---cCCCCCcCCCCCCCcCCCCEEEECCEEEECCCcEEEEeeEEEE
Confidence 442 1222 12223322 23222 1123478999999999998766553 3445556665
No 42
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=99.77 E-value=4e-19 Score=194.88 Aligned_cols=343 Identities=12% Similarity=0.108 Sum_probs=216.5
Q ss_pred HHHHHHHHHHHh--cCCCCceEEEEcCCCCc-CccCcCccccccccccccccCceEEEEeCCceEEEEcch---hHHHHh
Q 006890 2 AEILAALRSLMS--SHDPPLHALVVPSEDYH-QSEYVSARDKRREFVSGFTGSAGLALITMNEALLWTDGR---YFLQAT 75 (627)
Q Consensus 2 ~~Rl~~Lr~~m~--~~~~~~Da~li~~~d~h-~sey~~~~~~~~~ylTGFtgs~g~~vvt~~~a~l~tD~R---Y~~qA~ 75 (627)
.+||++||+.|+ +++ +||+||+++|+| +|+|+ .++..+.|||||+++.+++||+.++++||||+| |+.||+
T Consensus 14 ~~Rl~~Lr~~m~~~~~g--iDa~li~~~~~~~~~~y~-~~~~~~~yLtGf~~~~~~lvVt~d~~~L~~d~~~~~y~~~a~ 90 (467)
T 3biq_A 14 KKRIELLYSKYNEFEGS--PNSLLFVLGSSNAENPYQ-KTTILHNWLLSYEFPATLIALVPGKVIIITSSAKAKHLQKAI 90 (467)
T ss_dssp HHHHHHHHHHGGGSTTC--CSEEEEEECSCCTTSTTC-HHHHHHHHHHSSCCSSEEEEEETTEEEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcC--CCEEEEEcCCCCCCCCCc-cchhhhhHhhCCCCCCEEEEEECCeEEEEECCcchHHHHHHh
Confidence 579999999999 887 999999999998 69999 899999999999999999999999999999999 788998
Q ss_pred c--ccc--C-cEEEEEc--CCC---CCHHHHHHhhCCC-CCEEEEc-CCCCCHHHHHHHHHHHHh----cCCeEEecCcC
Q 006890 76 Q--ELT--G-EWKLMRM--LED---PAVDVWMANNLPN-DAAIGVD-PWCVSIDTAQRWERAFAK----KQQKLVQTSTN 139 (627)
Q Consensus 76 ~--~~~--~-~~~~~~~--~~~---~~~~~~l~~~l~~-~~~vg~d-~~~~s~~~~~~l~~~l~~----~~~~l~~~~~~ 139 (627)
+ ++. + .++++.+ .+. +.+.++|.+.+++ +++||++ ++.+|...++.|++.+.. .+.++++. ++
T Consensus 91 ~~~e~~~~~~~v~v~~~~~~~~~~~~~~~~~L~~~L~~~~~~Igv~~~~~~s~~~~~~L~~~l~~~~~~~~~~lv~~-~~ 169 (467)
T 3biq_A 91 DLFKDPESKITLELWQRNNKEPELNKKLFDDVIALINSAGKTVGIPEKDSYQGKFMTEWNPVWEAAVKENEFNVIDI-SL 169 (467)
T ss_dssp GGGCC--CCCEEEEEEECTTCHHHHHHHHHHHHHHHHHHCSEEEECTTCCCCSHHHHHHHHHHHHHHHHHTCEEEEC-HH
T ss_pred hhcccccCCCCeEEEEecccccccchhhHHHHHHHHHhhCCEEEEecCcccchhHHHHHHHHHHhhcccCCceeech-HH
Confidence 7 654 2 4777755 211 1244667766543 4689995 678899999999988753 35789988 79
Q ss_pred hhhHhhhcCCCCCCCccccccccccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEE
Q 006890 140 LVDKVWKNRPPVETYPVTVQQIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVT 219 (627)
Q Consensus 140 lid~lr~~k~~~e~~~i~~~~~~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~ 219 (627)
+|+.+|.+|++.| |+.+|++.+... ..+... +.|+- |. +.
T Consensus 170 ~i~~lr~iK~~~E-------------------i~~~r~A~~i~~--~a~~~~---~~~i~----------~~------i~ 209 (467)
T 3biq_A 170 GLSKVWEVKDVNE-------------------QAFLSVSSKGSD--KFMDLL---SNEMV----------RA------VD 209 (467)
T ss_dssp HHHHHTCSCCHHH-------------------HHHHHHHHHHHH--HHHHHH---HHHHH----------HH------HH
T ss_pred HHHHHHccCCHHH-------------------HHHHHHHHHHHH--HHHHHH---HHHhh----------hc------cc
Confidence 9999999999988 666666654311 111000 01110 00 00
Q ss_pred CCceEEEEeCCCCCHHHHHhhhh-----CC-------------e----EEeeCCchhHHHHHHhhccCCC---CCCC---
Q 006890 220 TNAAFLYVDKRKVSSEVISFLKE-----SG-------------V----EVRDYDAVSSDVVLLQSNQLNP---PADV--- 271 (627)
Q Consensus 220 ~~~~~L~v~~~~~~~~~~~~l~~-----~~-------------v----~v~~y~~~~~~~~~~~~~~l~~---~~~~--- 271 (627)
.+ ..+++.++...++..+.. .| + ...+|..+ ++++.+.+ |..+
T Consensus 210 ~g---~g~te~el~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~f~~i------v~~G~n~~~~~H~~~~~~ 280 (467)
T 3biq_A 210 EE---LKITNAKLSDKIENKIDDVKFLKQLSPDLSALCPPNYKFNFDLLDWTYSPI------IQSGKKFDLRVSARSTND 280 (467)
T ss_dssp TT---CCCBHHHHHHHHHHGGGCHHHHHHHHHHHHTTSCTTCCCCGGGEEESSCCE------EECTTCCCCSTTCCCCSS
T ss_pred cc---CCccHHHHHHHHHHHHHhhhhhhcCCccccccccccccCCcccccCCCCCe------EEecCCcceeeccCCCCC
Confidence 00 013444455555554443 22 2 24567666 44444432 3321
Q ss_pred --CCCCEEEEcCCCCcHHHHhhcCCC--eEEecCCccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhh
Q 006890 272 --QGSDLIWADPNSCSYALYSKLNSD--KVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIW-LDKQMQEIYG 346 (627)
Q Consensus 272 --~~~~~I~iD~~~~~~~~~~~l~~~--~~~~~~~~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~-l~~~~~~~~~ 346 (627)
..++.|.+|.+. .+ ...... ..+... + ++. .|++..+.-.++...++. +
T Consensus 281 ~l~~gd~v~iD~g~-~~---~gy~sD~tRT~~~g-~--------~~~----~~~~~~~v~~a~~~~~~~~~--------- 334 (467)
T 3biq_A 281 QLYGNGCILASCGI-RY---NNYCSNITRTFLID-P--------SEE----MANNYDFLLTLQKEIVTNIL--------- 334 (467)
T ss_dssp BCCCSEEEEEEECE-EE---TTEECCEEEEEEES-C--------CHH----HHHHHHHHHHHHHHHHHHTC---------
T ss_pred ccCCCCEEEEEEeE-EE---CCEEeeeeEEEEeC-C--------CHH----HHHHHHHHHHHHHHHHHhCC---------
Confidence 457888888763 11 111111 111111 1 332 345555555555555444 3
Q ss_pred ccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhc-CCCCCcCCccc--ccCCCcccccccC---CCCc-cCCCCC
Q 006890 347 ASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKE-HFRGLSFPTIS--SVGPNAAIMHYSP---QSET-CAEMDP 419 (627)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~-g~~~~~f~~i~--~~G~n~a~~h~~~---~~~~-~~~l~~ 419 (627)
+||++-.+|...+.+...+.. |+ +..|..-. +.|-+ .|-.| +... +.+|++
T Consensus 335 ------------------~pG~~~~~v~~~~~~~~~~~g~g~-~~~~~h~~GHgiGl~---~hE~p~~~~~~~~~~~l~~ 392 (467)
T 3biq_A 335 ------------------KPGRTPKEVYESVIEYIEKTKPEL-VPNFTKNIGSLIGLE---FRDSNFILNVKNDYRKIQR 392 (467)
T ss_dssp ------------------CTTCCHHHHHHHHHHHHHHHCGGG-GGGBCSCCEEECSSS---SCCGGGBSSTTCCSCCCCT
T ss_pred ------------------cCCCcHHHHHHHHHHHHHHhCcch-hhcCCCCcccccccc---cccCCccCCCCCCCCccCC
Confidence 789999999999988764432 22 12232212 22321 23222 1123 479999
Q ss_pred CCeEEEeecce-e-----c-CcccceEEEEecC
Q 006890 420 NSIYLCDSGAQ-Y-----Q-DGTTDITRTFHFG 445 (627)
Q Consensus 420 gd~vliD~g~~-y-----~-gy~~D~tRT~~~G 445 (627)
|-++.+..|.. . . .+..-+.-|+.|.
T Consensus 393 Gmv~tiEPgiy~~~~~~~~g~~gvriEd~v~Vt 425 (467)
T 3biq_A 393 GDCFNISFGFNNLKDSQSANNYALQLADTVQIP 425 (467)
T ss_dssp TCEEEEEEEEEEECCSSCSSCEEEEEEEEEECC
T ss_pred CCEEEEeCeEEeeecCCCCCccEEEEEEEEEEe
Confidence 99999999876 3 3 3456677788886
No 43
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans}
Probab=99.73 E-value=4.6e-18 Score=180.98 Aligned_cols=322 Identities=13% Similarity=0.084 Sum_probs=200.4
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccCc----eEEEEeCC-ceEEEEcchhHHHHhc
Q 006890 2 AEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSA----GLALITMN-EALLWTDGRYFLQATQ 76 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs~----g~~vvt~~-~a~l~tD~RY~~qA~~ 76 (627)
.+|+++||+.|++++ +||+||+++ .|++|||||+++. ++++|+.+ +++|++|.+|..++++
T Consensus 16 ~~R~~~l~~~m~~~g--~da~li~~~------------~ni~YltG~~~~~~~r~~~l~v~~~g~~~l~~~~~~~~~~~~ 81 (378)
T 4ege_A 16 ARRLAAAAAATEQAG--LAGLVITPG------------YDLRYLIGSRADTFERLTALVLPASGVPTIVLPRLELASLKE 81 (378)
T ss_dssp HHHHHHHHHHHHHTT--CSEEEECSS------------HHHHHHHCCCCCCSSSCCEEEEESSSCCEEEEEGGGGGGGGT
T ss_pred HHHHHHHHHHHHHcC--CCEEEECCc------------chhHHhhCCCCCCCcceEEEEEEeCCcEEEEEChhhHHHHHh
Confidence 579999999999987 999999999 8999999999975 68888876 5899999999999987
Q ss_pred cc-c-CcEEEEEcCCCCCHHHHHHhhCCCC-CEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhhcCCCCCC
Q 006890 77 EL-T-GEWKLMRMLEDPAVDVWMANNLPND-AAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNRPPVET 153 (627)
Q Consensus 77 ~~-~-~~~~~~~~~~~~~~~~~l~~~l~~~-~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~~k~~~e~ 153 (627)
+. . ..+.++.+.+.....+.+.+.+... ++||+| ..+++..+..|++.+ +.++++. ++++..+|.+|++.|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~igve-~~~~~~~~~~l~~~~---~~~~~~~-~~~i~~~R~iKs~~E- 155 (378)
T 4ege_A 82 SAASDLGVCVRDWVDGDDPYQLVAVALGGAPAATAVT-DSMPALHLLPLADAL---GVLPVLA-TDVLRQLRMVKEAAE- 155 (378)
T ss_dssp SSTTTTTCEEEEECTTSCHHHHHHHHTTSSSCCEEEC-TTCCHHHHHHHHHHH---TSCCEES-HHHHHHHHTBCCHHH-
T ss_pred cccCCCCeEEEEecCCCCHHHHHHHHHhcCCCEEEEc-CCCcHHHHHHHHHHc---CCeEEEc-HHHHHHHHHcCCHHH-
Confidence 63 2 2355665544434456677777654 689999 679999999999887 3688888 889999999999998
Q ss_pred CccccccccccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECCceEEEEeCCCCC
Q 006890 154 YPVTVQQIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVS 233 (627)
Q Consensus 154 ~~i~~~~~~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~v~~~~~~ 233 (627)
|+.+|++.+.. +..+.... .|+ + | .+++.++.
T Consensus 156 ------------------i~~~r~A~~i~--~~a~~~~~---~~i---~-------~---------------G~tE~el~ 187 (378)
T 4ege_A 156 ------------------VDALAKAGAAI--DRVHARVP---AFL---V-------P---------------GRTEAQVA 187 (378)
T ss_dssp ------------------HHHHHHHHHHH--HHHHHHHH---HHC---C-------T---------------TCBHHHHH
T ss_pred ------------------HHHHHHHHHHH--HHHHHHHH---Hhc---c-------C---------------CCCHHHHH
Confidence 66666554331 11110000 000 0 1 13444555
Q ss_pred HHHHHhhhhCCeEEeeCCchhHHHHHHhhccCCC--CCC-----CCCCCEEEEcCCCCcHHHHhhcCCC--eEEecCCcc
Q 006890 234 SEVISFLKESGVEVRDYDAVSSDVVLLQSNQLNP--PAD-----VQGSDLIWADPNSCSYALYSKLNSD--KVLLQQSPL 304 (627)
Q Consensus 234 ~~~~~~l~~~~v~v~~y~~~~~~~~~~~~~~l~~--~~~-----~~~~~~I~iD~~~~~~~~~~~l~~~--~~~~~~~~i 304 (627)
..++..+...|.+-.+| .+ ++++.+.. |.. ...++.|.+|.+. .+ .+..... ..+....
T Consensus 188 ~~~~~~~~~~G~~~~~f-~i------v~sG~n~~~~H~~~~~~~l~~Gd~v~iD~G~-~~--~~GY~sD~tRT~~vG~-- 255 (378)
T 4ege_A 188 ADIAEAIVAEGHSAVAF-VI------VGSGPHGADPHHGYSDRKLQVGDIVVVDIGG-TY--EPGYYSDSTRTYSIGD-- 255 (378)
T ss_dssp HHHHHHHHHTTCSEEEE-EE------EEEGGGGGCTTCCCCSCBCCTTCEEEEEEEE-EE--TTTEECCEEEEEEESC--
T ss_pred HHHHHHHHHcCCCCCCe-eE------EEeeCCCCccCCCCCCCCcCCCCEEEEEEEE-EE--CCeEEEccEEEEEeCC--
Confidence 55555555556554455 33 22222222 221 1467888888752 11 0111111 1111111
Q ss_pred chhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhh
Q 006890 305 ALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASK 384 (627)
Q Consensus 305 ~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~ 384 (627)
.+++ +|++....-.++...++. .+||++-.++.+.+.+... .
T Consensus 256 ------~~~~----~~~~~~~v~~a~~~~~~~---------------------------~~pG~~~~~v~~~~~~~~~-~ 297 (378)
T 4ege_A 256 ------PSPD----VAQQYSALQRAQRAAVDA---------------------------VRPGVTAAQVDAAARDVLA-D 297 (378)
T ss_dssp ------CCHH----HHHHHHHHHHHHHHHHHH---------------------------CCTTCBHHHHHHHHHHHHH-H
T ss_pred ------CCHH----HHHHHHHHHHHHHHHHHH---------------------------cCCCCcHHHHHHHHHHHHH-H
Confidence 1332 344554555555544443 3799999999999988764 3
Q ss_pred cCCCCCcCC--cccccCCCcccccccCC--CCccCCCCCCCeEEEeecceecC-cccceEEEEecC
Q 006890 385 EHFRGLSFP--TISSVGPNAAIMHYSPQ--SETCAEMDPNSIYLCDSGAQYQD-GTTDITRTFHFG 445 (627)
Q Consensus 385 ~g~~~~~f~--~i~~~G~n~a~~h~~~~--~~~~~~l~~gd~vliD~g~~y~g-y~~D~tRT~~~G 445 (627)
.|+.. .|. +--+.|-. .|-.|. ..++.+|++|-++.++.|....| +..-+.-|+.+.
T Consensus 298 ~G~~~-~~~h~~GHgiGl~---~hE~P~i~~~~~~~L~~Gmv~tiEPgiy~~g~~gvriEd~v~Vt 359 (378)
T 4ege_A 298 AGLAE-YFVHRTGHGIGLC---VHEEPYIVAGNELPLVAGMAFSIEPGIYFPGRWGARIEDIVVVT 359 (378)
T ss_dssp TTCGG-GCCSCSEEECSSS---SSEEEEECTTCCCBCCTTBEEEECCEEEETTTEEEECBEEEEEE
T ss_pred cCCCC-cCCCCCcccCCCC---cCCCCccCCCCCCccCCCCEEEECCEEEeCCccEEEEeeEEEEe
Confidence 45421 222 11222322 233221 12347999999999999986654 345556666663
No 44
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=99.72 E-value=3.2e-18 Score=184.14 Aligned_cols=133 Identities=14% Similarity=0.113 Sum_probs=110.6
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccC----ceEEEEeCCceEEEEcchhHHHHhcc
Q 006890 2 AEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGS----AGLALITMNEALLWTDGRYFLQATQE 77 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs----~g~~vvt~~~a~l~tD~RY~~qA~~~ 77 (627)
.+|+++||+.|++++ +||+||+++ .|++|||||+++ .++++|+.+++.||+|+||..|+.++
T Consensus 25 ~~Rl~~Lr~~m~~~~--lDa~li~~~------------~ni~yltgf~~s~~~~p~~llV~~~~~~l~~~~~~~~~a~~~ 90 (402)
T 1kp0_A 25 TRRZBRLRAWMAKSB--IDAVLFTSY------------HNINYYSGWLYCYFGRKYAZVIBZVKAVTISKGIDGGMPWRR 90 (402)
T ss_dssp HHHHHHHHHHHHHHT--CSEEEECSH------------HHHHHHHSCCCCCTTCCCEEEECSSCEEEEEEGGGTTHHHHH
T ss_pred HHHHHHHHHHHHHCC--CCEEEEcCC------------CCceEecCCCCCCCCceEEEEEeCCCCEEEeccchhhhhHHh
Confidence 579999999999987 999999998 799999999986 37899999999999999999998777
Q ss_pred ccC-cEEEEEcCCCCCHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhhcCCCCC
Q 006890 78 LTG-EWKLMRMLEDPAVDVWMANNLPNDAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNRPPVE 152 (627)
Q Consensus 78 ~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~~k~~~e 152 (627)
+.. .+.+..+ ..+.+.++|.+.++..++||+|++.+|+..++.|++.++ +.++++. +++|+.+|.+|++.|
T Consensus 91 ~~~~~v~~~~~-~~~~~~~~l~~~l~~~~~igvd~~~~~~~~~~~l~~~l~--~~~~v~~-~~~i~~lR~iKs~~E 162 (402)
T 1kp0_A 91 SFGBNIVYTDW-KRDNFYSAVKKLVKGAKZIGIEHDHVTLBHRRZLZKALP--GTEFVDV-GZPVMWZRVIKSSEE 162 (402)
T ss_dssp CSSEEEEECSS-STTHHHHHHHHHHTTCSEEEECTTTCBHHHHHHHHHHST--TCEEEEC-HHHHHHHHTSCCHHH
T ss_pred ccCcceEeccc-cccCHHHHHHHHhccCCEEEEecCCCCHHHHHHHHHhCC--CCEEEEC-HHHHHHHHHcCCHHH
Confidence 654 2222211 123356788888776789999999999999999988763 4689988 799999999999998
No 45
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}
Probab=99.67 E-value=1.6e-16 Score=169.41 Aligned_cols=324 Identities=12% Similarity=0.154 Sum_probs=195.5
Q ss_pred CHHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccCce-----EEEEeCCceEEEEcchhHHHHh
Q 006890 1 MAEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAG-----LALITMNEALLWTDGRYFLQAT 75 (627)
Q Consensus 1 ~~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs~g-----~~vvt~~~a~l~tD~RY~~qA~ 75 (627)
|++|+++||+.|+++| +||+||+++ .|++|||||.+... +++++.++..++++.|+..++.
T Consensus 15 y~~Rl~rlr~~m~~~g--lDalli~~~------------~ni~YLTG~~~~~~~~~~~~lvv~~~g~~~~~~~~~~~~~~ 80 (377)
T 4fkc_A 15 YKRRIHKFQAHFGKKG--FEGALVAPG------------SNFYYLTGFNPLGTLERLFVLILPSEGLLTAIAPRLYEKEL 80 (377)
T ss_dssp HHHHHHHHHHHHHHTT--CCEEEECSS------------HHHHHHHSCCCCCCSSSCCEEEEESSSCCEEEEEGGGHHHH
T ss_pred HHHHHHHHHHHHHHCC--CCEEEECCC------------hhheeecCCCCCCCCcceEEEEEcCCCcEEEEeccchHHHH
Confidence 3689999999999998 999999999 89999999987643 6778888777777788888777
Q ss_pred ccccCcEEEEEcCCCC--CHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhhcCCCCCC
Q 006890 76 QELTGEWKLMRMLEDP--AVDVWMANNLPNDAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNRPPVET 153 (627)
Q Consensus 76 ~~~~~~~~~~~~~~~~--~~~~~l~~~l~~~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~~k~~~e~ 153 (627)
++.......+...+.+ .+.+.|.+....+++||+| ..+++..+.+|++.++ +.+++++ +++|+++|.+|++.|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~d-~~~~~~~~~~l~~~~~--~~~~~d~-~~~i~~lR~iKs~~E- 155 (377)
T 4fkc_A 81 EEFNGEVVLWSDSENPYKIFATKIKETFKEGEKLLID-DTMPVGVFLKAKDIFD--KYSLHPI-SPVISELREIKDKDE- 155 (377)
T ss_dssp TTCSSEEEEECTTSCHHHHHHHHHHHHSCSSCEEEEC-TTSCHHHHHHTHHHHT--TSEEEES-HHHHHHHHTSCCHHH-
T ss_pred HhcCCCEEEeccccCHHHHHHHHHHHhhhccceeeee-ccccHHHHHHHHhhCC--CCeEEEh-HHHHHHHHhcCCHHH-
Confidence 6665433333222221 1234455666667899999 5689999999999884 4799998 889999999999998
Q ss_pred CccccccccccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECCceEEEEeCCCCC
Q 006890 154 YPVTVQQIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVS 233 (627)
Q Consensus 154 ~~i~~~~~~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~v~~~~~~ 233 (627)
|+.+|++.+.. +..+....+.+ + | .+++.++.
T Consensus 156 ------------------I~~~r~A~~i~--~~a~~~~~~~~------~-------~---------------G~tE~el~ 187 (377)
T 4fkc_A 156 ------------------IKAHKKAAEIV--DKVFYRFIEGK------L-------E---------------GKSERELA 187 (377)
T ss_dssp ------------------HHHHHHHHHHH--HHHHHHHTTSC------C-------T---------------TCBHHHHH
T ss_pred ------------------HHHHHHHHHHH--HHHHHhhhhcc------C-------C---------------CccHHHHH
Confidence 77777765431 11110011000 0 1 13444455
Q ss_pred HHHHHhhhh-CCeEEeeCCchhHHHHHHhhccCCC--CCC-----CCCCCEEEEcCCCCcHHHHhhcCCC--eEEecCCc
Q 006890 234 SEVISFLKE-SGVEVRDYDAVSSDVVLLQSNQLNP--PAD-----VQGSDLIWADPNSCSYALYSKLNSD--KVLLQQSP 303 (627)
Q Consensus 234 ~~~~~~l~~-~~v~v~~y~~~~~~~~~~~~~~l~~--~~~-----~~~~~~I~iD~~~~~~~~~~~l~~~--~~~~~~~~ 303 (627)
..++..+.. .|.+..+|..+ ++++.+.. |.. ...++.|.+|.+. .+ ...... ..+....+
T Consensus 188 ~~~~~~~~~~~g~~~~~f~~i------v~~G~n~~~~H~~~~~~~l~~gd~v~iD~g~-~~---~gy~sD~tRT~~~G~~ 257 (377)
T 4fkc_A 188 NRIEYMIKNEFGADDVSFEPI------VASGPNGANPHHRPSHRKIRKGDVVIFDYGA-KY---LGYCSDVTRTVVVGPP 257 (377)
T ss_dssp HHHHHHHHTSTTCCEESSCCE------EEEGGGGGCTTCCCCSCBCCTTCEEEEEECE-EE---TTEECCEEEEEESSSC
T ss_pred HHHhhhhhhccCCCCcccCcc------ccccccccccccccccccccccccccccccc-cc---cCcccccceeEEEecC
Confidence 555544433 36667777776 44444433 321 2468889999762 11 111111 11111111
Q ss_pred cchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHh
Q 006890 304 LALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRAS 383 (627)
Q Consensus 304 i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~ 383 (627)
++ ..|++..+.-.++...++. .+||++-.++...+.+...
T Consensus 258 --------~~----~~~~~~~~v~~a~~~~~~~---------------------------~~pG~~~~~i~~~~~~~~~- 297 (377)
T 4fkc_A 258 --------SE----EVKKVYEIVKEAQETAVQK---------------------------VAEGIPAEVVDATARGIIS- 297 (377)
T ss_dssp --------CT----HHHHHHHHHHHHHHHHHHH---------------------------CBTTCBHHHHHHHHHHHHH-
T ss_pred --------CH----HHHHhhhhhHHHHHHHHHh---------------------------hcCCcchhhhHHHHHHHHH-
Confidence 12 2344444444444444443 3799999999999888764
Q ss_pred hcCCCCCcCCcc--cccCCCcc-cccccCCCCccCCCCCCCeEEEeecceecCc-ccceEEEEec
Q 006890 384 KEHFRGLSFPTI--SSVGPNAA-IMHYSPQSETCAEMDPNSIYLCDSGAQYQDG-TTDITRTFHF 444 (627)
Q Consensus 384 ~~g~~~~~f~~i--~~~G~n~a-~~h~~~~~~~~~~l~~gd~vliD~g~~y~gy-~~D~tRT~~~ 444 (627)
..|+. ..|..- -+.|-+.- .|...| .++.+|++|-++.+.-|....|. ..-+.-|+.+
T Consensus 298 ~~g~~-~~~~h~~GHgiGl~~hE~P~i~~--~~~~~L~~Gmv~tiEPgiy~~g~~GvriEd~v~V 359 (377)
T 4fkc_A 298 KYGYG-EYFIHRTGHGLGIDVHEEPYISP--GNKKILKDGMVFTIEPGIYLQGKFGVRIEDDVAL 359 (377)
T ss_dssp HTTCT-TTCCSCSEEECSSSSSEEEEECS--SCCCBCCTTCEEEECCEEEETTTEEEECBEEEEE
T ss_pred Hhccc-ccCCCCCeEeCCCccccCCcccC--CCCCEeCCCCEEEECCeeEECCccEEEEccEEEE
Confidence 34442 122221 22332210 122222 23578999999999988655442 2233345554
No 46
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A
Probab=99.66 E-value=7.2e-17 Score=170.23 Aligned_cols=316 Identities=15% Similarity=0.183 Sum_probs=196.9
Q ss_pred CHHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccCce-E-EEEeCCceEEEEcchhHHHHhccc
Q 006890 1 MAEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAG-L-ALITMNEALLWTDGRYFLQATQEL 78 (627)
Q Consensus 1 ~~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs~g-~-~vvt~~~a~l~tD~RY~~qA~~~~ 78 (627)
|.+|+++||+.|++++ +|+++|+++ .|++|||||+++.+ + ++|+.++..+++|.|+ .++ ++.
T Consensus 4 m~~R~~~l~~~m~~~~--~da~li~~~------------~n~~yltg~~~~~~~~~llv~~~~~~l~~~~~~-~~~-~~~ 67 (351)
T 1wy2_A 4 MNEKVKKIIEFMDKNS--IDAVLIAKN------------PNVYYISGASPLAGGYILITGESATLYVPELEY-EMA-KEE 67 (351)
T ss_dssp CCHHHHHHHHHHHHTT--CSEEEECSH------------HHHHHHHSCCCSSCCEEEEETTEEEEEEEHHHH-HHH-HHH
T ss_pred HHHHHHHHHHHHHHCC--CCEEEECCC------------CCceEecCCCCCCCcEEEEEECCCcEEEECchH-HHH-hhc
Confidence 5689999999999987 999999998 79999999999766 6 8889899999999999 888 344
Q ss_pred cCcEEEEEcCCCCCHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhhcCCCCCCCcccc
Q 006890 79 TGEWKLMRMLEDPAVDVWMANNLPNDAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNRPPVETYPVTV 158 (627)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~~k~~~e~~~i~~ 158 (627)
.. ++++.+.. + +.+.+.++..++||+| +.+++..++.|++.++ ..++++. ++++..+|.+|++.|
T Consensus 68 ~~-~~v~~~~~---~-~~l~~~l~~~~~ig~e-~~~~~~~~~~l~~~~~--~~~~~~~-~~~i~~~r~iK~~~E------ 132 (351)
T 1wy2_A 68 SN-IPVEKFKK---M-DEFYKALEGIKSLGIE-SSLPYGFIEELKKKAN--IKEFKKV-DDVIRDMRIIKSEKE------ 132 (351)
T ss_dssp CS-SCEEEESS---H-HHHHHHHTTCSEEEEC-TTCBHHHHHHHHHHSC--CCEEEEC-HHHHHHHHTSCCHHH------
T ss_pred CC-CeEEEeCc---H-HHHHHHHccCCEEEEc-CcCCHHHHHHHHhhCC--CCeEEEc-HHHHHHHHhCCCHHH------
Confidence 32 34443321 3 3355555545799999 8899999999987653 3488888 789999999999998
Q ss_pred ccccccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECCceEEEEeCCCCCHHHHH
Q 006890 159 QQIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVIS 238 (627)
Q Consensus 159 ~~~~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~v~~~~~~~~~~~ 238 (627)
++.+|++.+... ..+ .++... +.+ .+++.++...++.
T Consensus 133 -------------i~~~r~A~~i~~--~a~-------~~~~~~----------------i~~-----G~te~el~~~~~~ 169 (351)
T 1wy2_A 133 -------------IKIIEKACEIAD--KAV-------MAAIEE----------------ITE-----GKKEREVAAKVEY 169 (351)
T ss_dssp -------------HHHHHHHHHHHH--HHH-------HHHHHH----------------CCT-----TCBHHHHHHHHHH
T ss_pred -------------HHHHHHHHHHHH--HHH-------HHHHHh----------------ccC-----CCcHHHHHHHHHH
Confidence 777777654311 111 111100 000 1345555666666
Q ss_pred hhhhCCeEEeeCCchhHHHHHHhhccCCC--CCCC-----CCCCEEEEcCCCCcHHHHhhcCCC--eEEecCCccchhhh
Q 006890 239 FLKESGVEVRDYDAVSSDVVLLQSNQLNP--PADV-----QGSDLIWADPNSCSYALYSKLNSD--KVLLQQSPLALAKA 309 (627)
Q Consensus 239 ~l~~~~v~v~~y~~~~~~~~~~~~~~l~~--~~~~-----~~~~~I~iD~~~~~~~~~~~l~~~--~~~~~~~~i~~~r~ 309 (627)
.+...|..-.+|+.+ ++++.+.. |..+ ..++.|.+|.+. .+ .....+ ..+....+
T Consensus 170 ~~~~~g~~~~~f~~i------v~~g~n~~~~H~~~~~~~l~~gd~v~iD~G~-~~---~gy~sD~tRT~~vG~~------ 233 (351)
T 1wy2_A 170 LMKMNGAEKPAFDTI------IASGYRSALPHGVASDKRIERGDLVVIDLGA-LY---QHYNSDITRTIVVGSP------ 233 (351)
T ss_dssp HHHHTTCSEESSCCE------EEEGGGGGSTTCBCCSCBCCTTCEEEEEECE-EE---TTEECCEEEEEESSCC------
T ss_pred HHHHcCCCCCCCCCE------EEEccccccccCCCCCcccCCCCEEEEEEEE-EE---CCEEecceEEEEcCCC------
Confidence 666677766677766 34343332 3221 467888999762 11 111111 11111111
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHhhcCCCC
Q 006890 310 IKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEHFRG 389 (627)
Q Consensus 310 iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~~~g~~~ 389 (627)
++ ..|++....-.++...++. .+||++-.++...+.+... ..|+.
T Consensus 234 --~~----~~~~~~~~v~~a~~~~~~~---------------------------~~pG~~~~~v~~~~~~~~~-~~g~~- 278 (351)
T 1wy2_A 234 --NE----KQKEIYEIVLEAQKKAVES---------------------------AKPGITAKELDSIARNIIA-EYGYG- 278 (351)
T ss_dssp --CH----HHHHHHHHHHHHHHHHHHH---------------------------CCTTCBHHHHHHHHHHHHH-HTTCG-
T ss_pred --CH----HHHHHHHHHHHHHHHHHHH---------------------------cCCCCcHHHHHHHHHHHHH-HcCCc-
Confidence 22 2344554445555544443 3799999999999988764 34432
Q ss_pred CcCC--cccccCCCcccccccC--CCCccCCCCCCCeEEEeecceecC-cccceEEEEec
Q 006890 390 LSFP--TISSVGPNAAIMHYSP--QSETCAEMDPNSIYLCDSGAQYQD-GTTDITRTFHF 444 (627)
Q Consensus 390 ~~f~--~i~~~G~n~a~~h~~~--~~~~~~~l~~gd~vliD~g~~y~g-y~~D~tRT~~~ 444 (627)
..|. +--+.|-+ .|-.| +...+.+|++|.++.+..|....| +..-+.-|+.+
T Consensus 279 ~~~~h~~GHgiGl~---~hE~p~i~~~~~~~l~~Gmv~tiEPgiy~~g~~gvriEd~v~V 335 (351)
T 1wy2_A 279 EYFNHSLGHGVGLE---VHEWPRVSQYDETVLREGMVITIEPGIYIPKIGGVRIEDTILI 335 (351)
T ss_dssp GGCCSCSEEECSSS---SSEEEEESTTCCCBCCTTCEEEECCEEEETTTEEEECBEEEEE
T ss_pred ccCCCCcccccCCC---cCCCCccCCCCCCCcCCCCEEEECCEEEeCCCCeEEEeeEEEE
Confidence 2232 22223321 23222 112347899999999999876644 33334444444
No 47
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A
Probab=99.57 E-value=2e-15 Score=159.42 Aligned_cols=315 Identities=10% Similarity=0.095 Sum_probs=188.6
Q ss_pred HHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccC-----ceEEEEeCCc-eEEEEcchhHHHHhc
Q 006890 3 EILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGS-----AGLALITMNE-ALLWTDGRYFLQATQ 76 (627)
Q Consensus 3 ~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs-----~g~~vvt~~~-a~l~tD~RY~~qA~~ 76 (627)
+|+++||+.|++++ +|++||+++ .|++|||||.+. .++++|+.++ +.||+|.+|..+++.
T Consensus 1 ~R~~~l~~~m~~~~--~d~~li~~~------------~n~~yltG~~~~~~~~~~~~l~i~~~~~~~l~~~~~~~~~~~~ 66 (356)
T 1wn1_A 1 MRLEKFIHLLGERG--FDGALISPG------------TNLYYLTGLRLHEVGERLAILAVSAEGDYRFLAPSLYENVVNN 66 (356)
T ss_dssp CHHHHHHHHHHHTT--CSEEEECSS------------HHHHHHHCCCCSCCTTSCCEEEEETTSCEEEEEEGGGTTTTTT
T ss_pred CHHHHHHHHHHHCC--CcEEEECCC------------ccceeecCCcCCCCCCceEEEEEeCCCcEEEEECcccHHHhhC
Confidence 48999999999987 999999999 899999999753 4688899876 999999999887654
Q ss_pred cccCcEEEEEcCCCCCHHHHHHhhCC----CCCEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhhcCCCCC
Q 006890 77 ELTGEWKLMRMLEDPAVDVWMANNLP----NDAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNRPPVE 152 (627)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~~~l~----~~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~~k~~~e 152 (627)
. +++.+.+.....+.+.+.++ ..++||+| ..++...++.|++. .+.++++. ++++..+|.+|++.|
T Consensus 67 ---~--~v~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~-~~~~~~~~~~l~~~---~~~~~~~~-~~~i~~~R~iK~~~E 136 (356)
T 1wn1_A 67 ---F--PATFWHDGENPYAKLREILEELGISKGRILIE-DTMRADWLIGIMKL---GKFTFQPL-SSLIKELRMIKDKEE 136 (356)
T ss_dssp ---S--CEEEECTTSCHHHHHHHHHHHTTCSSEEEEEC-TTSBHHHHHHHGGG---SCEEEEET-HHHHHHHHTSCCHHH
T ss_pred ---C--eEEEEcCCCCHHHHHHHHHHHhcCCCCEEEEe-CCcCHHHHHHHHcC---CCCeEEEc-HHHHHHHHhCCCHHH
Confidence 2 23333222222333444332 34689999 78999998888764 24688888 789999999999998
Q ss_pred CCccccccccccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECCceEEEEeCCCC
Q 006890 153 TYPVTVQQIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKV 232 (627)
Q Consensus 153 ~~~i~~~~~~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~v~~~~~ 232 (627)
++.+|++.+.. +..+.... .|+ .| .+++.++
T Consensus 137 -------------------i~~~r~A~~i~--~~a~~~~~---~~i----------~~---------------G~te~el 167 (356)
T 1wn1_A 137 -------------------VKMMEHASRIA--DKVFEEIL---TWD----------LI---------------GMKEREL 167 (356)
T ss_dssp -------------------HHHHHHHHHHH--HHHHHHHT---TSC----------CT---------------TCBHHHH
T ss_pred -------------------HHHHHHHHHHH--HHHHHHHH---HHc----------cC---------------CCcHHHH
Confidence 77777665431 11110111 110 01 1344455
Q ss_pred CHHHHHhhhhCCeEEeeCCchhHHHHHHhhccCCC--CCC-----CCCCCEEEEcCCCCcHHHHhhcCCC--eEEecCCc
Q 006890 233 SSEVISFLKESGVEVRDYDAVSSDVVLLQSNQLNP--PAD-----VQGSDLIWADPNSCSYALYSKLNSD--KVLLQQSP 303 (627)
Q Consensus 233 ~~~~~~~l~~~~v~v~~y~~~~~~~~~~~~~~l~~--~~~-----~~~~~~I~iD~~~~~~~~~~~l~~~--~~~~~~~~ 303 (627)
...++..+... ..-.+|..+ ++++.+.. |+. ...++.|.+|.+. .+ ...... ..+....+
T Consensus 168 ~~~~~~~~~~~-~~~~~f~~i------v~~g~n~~~~H~~~~~~~l~~gd~v~iD~g~-~~---~gy~sD~tRT~~vG~~ 236 (356)
T 1wn1_A 168 ALKIELLIREL-SDGIAFEPI------VASGENAANPHHEPGERKIRKGDIIILDYGA-RW---KGYCSDITRTIGLGEL 236 (356)
T ss_dssp HHHHHHHHHHH-SSEESSCCE------EEEGGGGGCTTCCCCSCBCCTTCEEEEEECE-EE---TTEECCEEEEEESSSC
T ss_pred HHHHHHHHHHh-CcCCCCCcE------EEEecccccccCCCCCCeecCCCEEEEEEEE-EE---CCEEeccEEEEEcCCC
Confidence 55555544444 444556655 33333322 322 1457888999763 11 111111 11111111
Q ss_pred cchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHHHh
Q 006890 304 LALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRAS 383 (627)
Q Consensus 304 i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~~~ 383 (627)
++ ..|++....-.++...++. .+||++-.++...+.+...
T Consensus 237 --------~~----~~~~~~~~v~~a~~~~~~~---------------------------~~pG~~~~~i~~~~~~~~~- 276 (356)
T 1wn1_A 237 --------DE----RLVKIYEVVKDAQESAFKA---------------------------VREGIKAKDVDSRAREVIS- 276 (356)
T ss_dssp --------CH----HHHHHHHHHHHHHHHHHHH---------------------------CBTTSBHHHHHHHHHHHHH-
T ss_pred --------CH----HHHHHHHHHHHHHHHHHHH---------------------------hcCCCcHHHHHHHHHHHHH-
Confidence 22 2344555555555554443 3799999999999988764
Q ss_pred hcCCCCCcCC--cccccCCCcccccccCC--CCccCCCCCCCeEEEeecceecC-cccceEEEEecC
Q 006890 384 KEHFRGLSFP--TISSVGPNAAIMHYSPQ--SETCAEMDPNSIYLCDSGAQYQD-GTTDITRTFHFG 445 (627)
Q Consensus 384 ~~g~~~~~f~--~i~~~G~n~a~~h~~~~--~~~~~~l~~gd~vliD~g~~y~g-y~~D~tRT~~~G 445 (627)
..|+. ..|. +--+.|-+ .|-.|. ..++.+|++|-++.+..|....| +..-+.-|+.+.
T Consensus 277 ~~g~~-~~~~h~~GHgiGl~---~he~p~i~~~~~~~l~~Gmv~tiEPgiy~~g~~gvriEd~v~Vt 339 (356)
T 1wn1_A 277 KAGYG-EYFIHRTGHGLGLD---VHEEPYIGPDGEVILKNGMTFTIEPGIYVPGLGGVRIEDDIVVD 339 (356)
T ss_dssp TTTCG-GGCCSCSEEECSSS---SSEEEEESTTCCCBCCTTCEEEECCEEEETTTEEEECBEEEEEE
T ss_pred HcCCc-ccCCCCCcccCCCc---cCCCcccCCCCCCCcCCCCEEEECCeeEeCCCcEEEEeeEEEEe
Confidence 34542 2232 21223321 232221 12347999999999998886544 334455566653
No 48
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=99.51 E-value=4.4e-14 Score=153.77 Aligned_cols=147 Identities=12% Similarity=0.171 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHhc--------CCCCceEEEEcCCCCcC-ccCcCccccccccccccccCceEEEEeCCceEEEEcch---
Q 006890 2 AEILAALRSLMSS--------HDPPLHALVVPSEDYHQ-SEYVSARDKRREFVSGFTGSAGLALITMNEALLWTDGR--- 69 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~--------~~~~~Da~li~~~d~h~-sey~~~~~~~~~ylTGFtgs~g~~vvt~~~a~l~tD~R--- 69 (627)
.+|+++||+.|++ ++ +|++||+++|++. +.|-.+.+ +++|||||+++.+++|+++++++||+|.|
T Consensus 14 ~~Rl~~L~~~m~~~~~~~~~~~g--~Dalli~~~~~d~~~~y~q~~~-~~~yLtG~~~~~~~lvi~~~~~~l~~~~~~~~ 90 (444)
T 3cb6_A 14 HKRLGILLTSWKNEEDGKTLFQD--CDSILVTVGAHDDTNPYQKSTA-LHTWLLGYEFPSTLILLEKHRITILTSVNKAN 90 (444)
T ss_dssp HHHHHHHHHHHHSHHHHHHTSTT--CSEEEEEECSCCTTCCCCHHHH-HHHHHHSSCCSSEEEEEETTEEEEEEEHHHHT
T ss_pred HHHHHHHHHHhhhcCcccccccC--CCEEEEEeCCCCCCCCcccchh-hhHHHhCCCCCCEEEEEeCCcEEEEEcCchHH
Confidence 5799999999998 76 9999999997621 12222110 27899999999999999999999999998
Q ss_pred hHHHHh-ccccC-cEEEEEc-CCC--C-CHHHHHHhhCC-CCCEEEEcC-CCCCHHHHHHHHHHHHh--cCCeEEecCcC
Q 006890 70 YFLQAT-QELTG-EWKLMRM-LED--P-AVDVWMANNLP-NDAAIGVDP-WCVSIDTAQRWERAFAK--KQQKLVQTSTN 139 (627)
Q Consensus 70 Y~~qA~-~~~~~-~~~~~~~-~~~--~-~~~~~l~~~l~-~~~~vg~d~-~~~s~~~~~~l~~~l~~--~~~~l~~~~~~ 139 (627)
|.+|++ .+... .++++.+ .+. + ...+++.+.+. ..++||+++ +.++...+..+.+.+.. .+.+++++ ++
T Consensus 91 y~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~ig~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~ 169 (444)
T 3cb6_A 91 MLTKLAETKGAAADVNILKRTKDAEENKKLFEKIIEYIRATNKKVGVFPKDKTQGKFINEWDSIFEPVKSEFNLVDA-SL 169 (444)
T ss_dssp TTHHHHTCTTCSSEEEEEEECSCHHHHHHHHHHHHHHHHTTTSEEEECTTCCCCSHHHHHHHHHHTTTGGGSEEEEC-HH
T ss_pred HHhhhhccccCCccEEEEecccccccCHHHHHHHHHHHHhcCCEEEEeccccchhHHHHHHHHHHhhccCCceEeec-HH
Confidence 778887 65543 3566644 221 1 11234444443 246899987 67787888888777732 23688888 78
Q ss_pred hhhHhhhcCCCCC
Q 006890 140 LVDKVWKNRPPVE 152 (627)
Q Consensus 140 lid~lr~~k~~~e 152 (627)
++..+|.+|++.|
T Consensus 170 ~i~~~r~iK~~~E 182 (444)
T 3cb6_A 170 GLAKCLAIKDEQE 182 (444)
T ss_dssp HHHHHHHSCCHHH
T ss_pred HHHHHHccCCHHH
Confidence 9999999999998
No 49
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114}
Probab=99.47 E-value=1.5e-14 Score=157.45 Aligned_cols=130 Identities=8% Similarity=0.041 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCcccccccccccccc--------CceEEEEeCCceEEEEcchhHHH
Q 006890 2 AEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTG--------SAGLALITMNEALLWTDGRYFLQ 73 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtg--------s~g~~vvt~~~a~l~tD~RY~~q 73 (627)
.+||++||+.|+++| +||+||+++ .|++|||||+| +.+++||+.+++.+|+|+||...
T Consensus 80 ~~Rl~rlr~~m~~~g--lDalli~~~------------~ni~YlTGf~g~~~~~~~~~~~~llV~~dg~~~l~d~r~~~~ 145 (470)
T 4b28_A 80 RFRHRRLTDHVVARG--YAGLLMFDP------------LNIRYATDSTNMQLWNTHNPFRATLLCADGYMVMWDYKNSPF 145 (470)
T ss_dssp HHHHHHHHHHHHHTT--CSEEEECSH------------HHHHHHHCCCSSHHHHHHSCCCEEEEETTSCEEEECCTTCGG
T ss_pred HHHHHHHHHHHHHcC--CCEEEEcCC------------CcceeecCCCCCcccccCCCCEEEEEECCCCEEEEecchhhh
Confidence 479999999999998 999999999 89999999998 46789999999999999999543
Q ss_pred HhccccCcEEEEEcCC------C-C------CH----HHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHHHHhcCCeEEec
Q 006890 74 ATQELTGEWKLMRMLE------D-P------AV----DVWMANNLPNDAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQT 136 (627)
Q Consensus 74 A~~~~~~~~~~~~~~~------~-~------~~----~~~l~~~l~~~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~ 136 (627)
.....+.--++..... . + .+ .+.|.+.-...++||||.. ++..++.|++ .++++++.
T Consensus 146 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~igve~~--~~~~~~~L~~----~~~~~vd~ 219 (470)
T 4b28_A 146 LSEFNPLVREQRAGADLFYFDRGDKVDVAADVFANEVRILLRDHAPGLRRLAVDKV--MLHGLRALQA----QGFEIMDG 219 (470)
T ss_dssp GGTTCTTSCEEECCCCCSHHHHGGGHHHHHHHHHHHHHHHHHHHSTTCCEEEESSC--CHHHHHHHHH----TTCEEEEH
T ss_pred hhhhhhHHHHHHhcCCeeeeccCccccccchhHHHHHHHHHHHhCccCceeeeCcc--hHHHHHHHHc----CCCEEEEc
Confidence 2211110001111000 0 0 01 1233333233579999974 6677777765 35799998
Q ss_pred CcChhhHhhhcCCCCC
Q 006890 137 STNLVDKVWKNRPPVE 152 (627)
Q Consensus 137 ~~~lid~lr~~k~~~e 152 (627)
++++..+|.+|++.|
T Consensus 220 -~~~v~~lR~iKs~~E 234 (470)
T 4b28_A 220 -EEVTEKARSVKGPDE 234 (470)
T ss_dssp -HHHHHHHHTSCCHHH
T ss_pred -HHHHHHHHhCCCHHH
Confidence 899999999999998
No 50
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae}
Probab=99.45 E-value=7.1e-13 Score=143.83 Aligned_cols=184 Identities=13% Similarity=0.143 Sum_probs=133.2
Q ss_pred CccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCcCHHHHHHHHHHHH
Q 006890 302 SPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFR 381 (627)
Q Consensus 302 ~~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~ei~~~l~~~~ 381 (627)
+.+..=+-+-|++-+..+|.|++|+..++..+..++.++... ...++|++-.|++...+.+.
T Consensus 32 ~~~lkekniln~dvltKYr~AgeIa~~vLk~v~~li~~G~~~------------------~~~kpga~I~ELCe~GD~~I 93 (614)
T 4b6a_t 32 QILLKDKNILQESVLNKYRTAGQIAQTALKYVTSLINDSYHS------------------KTTQRQLTVPELCLLTDSFI 93 (614)
T ss_dssp ----CCSSSSCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH------------------HHTTCCCBTTHHHHHHHHHH
T ss_pred hhhhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccc------------------cccCCCCcHHHHHHHHHHHH
Confidence 334445668899999999999999999999988876433210 00367888888888766654
Q ss_pred Hhh--------cCCCCCcCCcccccCCCcccccccCCCCc-------------------cCCCCCCCeEEEeecceecCc
Q 006890 382 ASK--------EHFRGLSFPTISSVGPNAAIMHYSPQSET-------------------CAEMDPNSIYLCDSGAQYQDG 434 (627)
Q Consensus 382 ~~~--------~g~~~~~f~~i~~~G~n~a~~h~~~~~~~-------------------~~~l~~gd~vliD~g~~y~gy 434 (627)
... ....|++|||-++ .|...+||+|..+. +..|+.||+|.||+|++.+||
T Consensus 94 ~e~~akvyk~K~~~KGIAFPT~IS--vN~~vaHysP~~~D~~~~~~~~~~~~~~~~~~~~~vLk~GDVVKIDLGvHIDGy 171 (614)
T 4b6a_t 94 LTRLEQYYKNKVNERGIAIPTTID--IDQISGGWCPEIDDTQNLLNWNKGKDSTFASSVTGTLRPGDLVKITLGVHIDGY 171 (614)
T ss_dssp HHHHHTSSTTCSCCEEEEEEEEEE--ETTEEECCCCCTTS------------------CCCBCCTTCEEEEEEEEEETTE
T ss_pred HHHHHhhhcCCcccCCCccCceec--HHHcccCCCCCCcchhhcccccccccccccccccccccCCCEEEEEeeEEECCe
Confidence 321 1234689988776 67788999996532 347999999999999999999
Q ss_pred ccceEEEEecCCCC-------------HHHHHHHHHHHHHHHHHHhcc----------------CCCCcccchHHHHHHH
Q 006890 435 TTDITRTFHFGKPS-------------AHEKACYTAVLKGHIALGNAV----------------FPNGTCGHTLDILARL 485 (627)
Q Consensus 435 ~~D~tRT~~~G~p~-------------~e~~~~y~~v~~~~~~~~~~~----------------~p~G~~~~~l~~~a~~ 485 (627)
.+|+++|++||... ....++..++..|.+++++.+ +| |++..+|-.+...
T Consensus 172 iadvA~Tvvvg~~~~~~~~~~~~~pvtGrkADli~AA~~A~EaalrLl~~~~~~e~l~a~l~~~~~-gvt~~~It~~Iek 250 (614)
T 4b6a_t 172 TSEVSHTMVIYPVDETKPILQPTGPLLGGKADAVAAAHIAMETVVALLACALTPEKLPASLGGTSS-GITGQLIRTIVDT 250 (614)
T ss_dssp EEEEEEEEECCCCTTTSTTTTTTSCBCHHHHHHHHHHHHHHHHHHHHC----------------ST-TCBHHHHHHHHHH
T ss_pred EEEEEEEEEECCcccccccccccccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhhhccCC-CcchHHHHHHHHH
Confidence 99999999998422 223334444444444444433 76 9999999999999
Q ss_pred HHHHcCCC-CcccccccccccC
Q 006890 486 PLWKYGLD-YRHGTGHGVGSYL 506 (627)
Q Consensus 486 ~l~~~G~~-~~h~~GHgvG~~l 506 (627)
....+|+. ...-+||+|+.|+
T Consensus 251 vaksY~ck~Vegl~sH~i~r~~ 272 (614)
T 4b6a_t 251 IARSYNCGVVPGSRVRRIRRFL 272 (614)
T ss_dssp HHHTTTCEECTTCEEEEEBTTB
T ss_pred HHhcCCcEEeccccccccccee
Confidence 99999984 5566899999774
No 51
>3il0_A Aminopeptidase P; XAA-Pro aminopeptidase; structural genomics MCSG, protein structure initiative, midwest center for STRU genomics; HET: GOL; 2.20A {Streptococcus thermophilus}
Probab=99.45 E-value=1.1e-13 Score=124.48 Aligned_cols=124 Identities=20% Similarity=0.288 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECCceEEEEeCCCCCHHHHHhhhhCCeEE
Q 006890 168 VVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFLKESGVEV 247 (627)
Q Consensus 168 ~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~v~~~~~~~~~~~~l~~~~v~v 247 (627)
+.+|++++|+.|+++|+|++++++++|++|||||+|++ ++++|+.+++.|+++.++..++.++ . .++++
T Consensus 4 ~~~Rl~~lr~~m~~~~~da~li~~~~ni~YltGf~~~~--------~~llv~~~~~~l~~d~r~~~~a~~~-~--~~~~v 72 (131)
T 3il0_A 4 MQRRLERFDAKLVQSGLDALLVTGQNNIYYLTDFWGTN--------ATVFITKNRRLFLTDSRYTLIAKQS-V--HGFDI 72 (131)
T ss_dssp GGGHHHHHHHHHHHHTCSEEEECSHHHHHHHHSCCCSS--------EEEEEESSCEEEEECTTSHHHHHHH-C--CSSEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEecccccEEEeCcccCC--------eEEEEECCCCEEEECchhHHHHHHh-C--CCcEE
Confidence 45799999999999999999999999999999999875 6899999999999999887654332 2 47888
Q ss_pred eeCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcC----CCeEEecCCccchhhhcC
Q 006890 248 RDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLN----SDKVLLQQSPLALAKAIK 311 (627)
Q Consensus 248 ~~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~----~~~~~~~~~~i~~~r~iK 311 (627)
..|++..+.+..+... .+.++||+|.. +|+..+..|. +.++++.++++..+|+||
T Consensus 73 ~~~~~~~~~l~~~l~~--------~~~~~ig~e~~-~~~~~~~~L~~~~~~~~~v~~~~~v~~lR~iK 131 (131)
T 3il0_A 73 IESKDPLKDIVKFVEV--------DKLETIGFDNQ-VSFAYYQALQAIFEGYTLSPQTNFMEELRMIK 131 (131)
T ss_dssp EECSCHHHHHHHHHHH--------TTCCEEEEETT-SCHHHHHHHHHHTTTSEEEEESSHHHHHHC--
T ss_pred EEeCCHHHHHHHHHHh--------cCCCEEEEcCC-CCHHHHHHHHhhcCCCEEEECchHHHHhccCC
Confidence 8886665555444321 12368999999 9998887664 458899999999999998
No 52
>3pn9_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; 2.00A {Streptococcus pneumoniae}
Probab=99.44 E-value=3.7e-14 Score=128.80 Aligned_cols=130 Identities=15% Similarity=0.163 Sum_probs=101.1
Q ss_pred HHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECC-ceEEEEeCCCCCHHHHHhhhhCCeEE
Q 006890 169 VEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTN-AAFLYVDKRKVSSEVISFLKESGVEV 247 (627)
Q Consensus 169 ~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~-~~~L~v~~~~~~~~~~~~l~~~~v~v 247 (627)
++|++++|+.|+++|+|++++++++|++||||++|++.. +.++++|+.+ +++||++.++..++. + ..++++
T Consensus 4 ~~Rl~~lr~~m~~~~~da~li~~~~ni~yltGf~g~~~e----r~~~lli~~~g~~~l~~d~~~~~~a~-~---~~~~~v 75 (138)
T 3pn9_A 4 MSKLQQILTYLESEKLDVAVVSDPVTINYLTGFYSDPHE----RQMFLFVLADQEPLLFVPALEVERAS-S---TVSFPV 75 (138)
T ss_dssp CCHHHHHHHHHHHHTCSEEEECCHHHHHHHHSCCCCCTT----SCCEEEEESSSCCEEEEEGGGHHHHH-H---HCSSCE
T ss_pred HHHHHHHHHHHHHCCCCEEEEcCcCceeeecCCCCCCcc----ceEEEEEeCCCCEEEEEeccchhhhh-c---cCCCcE
Confidence 358999999999999999999999999999999998743 3468888866 899999998876543 2 356788
Q ss_pred eeCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcC----CCeEEecCCccchhhhcC
Q 006890 248 RDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLN----SDKVLLQQSPLALAKAIK 311 (627)
Q Consensus 248 ~~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~----~~~~~~~~~~i~~~r~iK 311 (627)
..|.+..++...++ ..+.. .+.++||+|+..+|+..++.|. +.++++.++++..+|+||
T Consensus 76 ~~~~~~~~~~~~l~-~~l~~----~~~~~vg~e~~~~~~~~~~~l~~~~~~~~~v~~~~~i~~lR~iK 138 (138)
T 3pn9_A 76 VGYVDSENPWQKIK-HALPQ----LDFKRVAVEFDNLILTKYHGLKTVFETAEFDNLTPRIQRMRLIK 138 (138)
T ss_dssp EEECTTSCHHHHHH-HHSCC----CCCCEEEECTTTCCHHHHHHHHHHSTTCEEEECHHHHHHHTTCC
T ss_pred EEEcCCCCHHHHHH-HHHHh----ccCCeEEEecCcCCHHHHHHHHHHCCCCeeeehHHHHHHHhhcC
Confidence 88865433333333 22322 1357899999889998887764 458999999999999998
No 53
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=99.42 E-value=3.4e-14 Score=152.58 Aligned_cols=133 Identities=14% Similarity=0.163 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccC----ceEEEEeCCceEEEEcchhHHHHhcc
Q 006890 2 AEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGS----AGLALITMNEALLWTDGRYFLQATQE 77 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs----~g~~vvt~~~a~l~tD~RY~~qA~~~ 77 (627)
.+|+++||+.|++++ +|++||+++ .|++|||||..+ ...++|+.++..+++|++|..++.++
T Consensus 24 ~~R~~~l~~~m~~~~--~da~li~~~------------~ni~yltg~~~~~~~~~~~llv~~~~~~l~~~~~~~~~~~~~ 89 (401)
T 1chm_A 24 ANRQARLRAHLAAEN--IDAAIFTSY------------HNINYYSDFLYCSFGRPYALVVTEDDVISISANIDGGQPWRR 89 (401)
T ss_dssp HHHHHHHHHHHHHTT--CSEEEECSH------------HHHHHHHSCCCCCTTCCCEEEECSSCEEEEEEGGGTTHHHHH
T ss_pred HHHHHHHHHHHHHCC--CCEEEEeCc------------ccceeeCCCCcCCCCCeEEEEEecCCCEEEecccchhhHHHh
Confidence 579999999999987 999999998 799999999753 23677888899999999998886444
Q ss_pred ccCcEEEEEcCC--CCCHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhhcCCCCC
Q 006890 78 LTGEWKLMRMLE--DPAVDVWMANNLPNDAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNRPPVE 152 (627)
Q Consensus 78 ~~~~~~~~~~~~--~~~~~~~l~~~l~~~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~~k~~~e 152 (627)
......+. +.+ ...+.+.|.+.+...++||+|++.+++..++.|++.++ +.++++. ++++..+|.+|++.|
T Consensus 90 ~~~~~~v~-~~~~~~~~~~~~l~~~l~~~~~i~ve~~~~~~~~~~~l~~~~~--~~~~~~~-~~~i~~~R~iKs~~E 162 (401)
T 1chm_A 90 TVGTDNIV-YTDWQRDNYFAAIQQALPKARRIGIEHDHLNLQNRDKLAARYP--DAELVDV-AAACMRMRMIKSAEE 162 (401)
T ss_dssp CCSSEEEE-ECTTSTTHHHHHHHHHCSCCSEEEECTTTCBHHHHHHHHHHCT--TCEEEEC-HHHHHHHHTSCCHHH
T ss_pred hcccceee-eccccccCHHHHHHHHhccCCeEEEecCCCCHHHHHHHHhhCC--CCEEEEh-HHHHHHHHhcCCHHH
Confidence 33211222 211 12345667777766679999999999999999988763 3688888 889999999999998
No 54
>3qoc_A Putative metallopeptidase; MCSG, PSI-2, structural genomics, midwest center for structu genomics, hydrolase; HET: MSE; 2.15A {Corynebacterium diphtheriae}
Probab=99.24 E-value=7.2e-12 Score=113.31 Aligned_cols=125 Identities=15% Similarity=0.256 Sum_probs=95.2
Q ss_pred ccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEE-CCceEEEEeCCCCCHHHHHhhh
Q 006890 163 FAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVT-TNAAFLYVDKRKVSSEVISFLK 241 (627)
Q Consensus 163 ~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~-~~~~~L~v~~~~~~~~~~~~l~ 241 (627)
++-.+..+|++++|+.|+++++|+++++++.|++|||||.|+. ++++|+ .++++|++|.++..++.++ .
T Consensus 5 ~~~~~~~~Rl~~l~~~m~~~~~da~li~~~~n~~yltGf~~s~--------g~lvv~~~~~a~l~td~Ry~~qA~~~-~- 74 (135)
T 3qoc_A 5 LADTRFLQRRRALSAQLAAKRIDAMLVTHLTHIRYLSGFTGSN--------AALIINKDLSARISTDGRYITQIAEQ-V- 74 (135)
T ss_dssp CCCCHHHHHHHHHHHTHHHHTCSEEEECCHHHHHHHHCCCSSC--------CEEEEETTSCEEEEECGGGHHHHHHH-C-
T ss_pred cChHHHHHHHHHHHHHHHHCCCCEEEEcChhhCeeeecccCCC--------eEEEEeeCCccEEEeCcHHHHHHHHh-C-
Confidence 5567789999999999999999999999999999999999865 688999 8899999999987665433 2
Q ss_pred hCCeEEeeCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcC----C-CeEEecCCccchhh
Q 006890 242 ESGVEVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLN----S-DKVLLQQSPLALAK 308 (627)
Q Consensus 242 ~~~v~v~~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~----~-~~~~~~~~~i~~~r 308 (627)
.++++..+....+. ++. .. ..+++||+|...+++..++.|. . .++++.+++|..+|
T Consensus 75 -~~~~i~~~~~~~~~---l~~-~~------~~~~~vG~e~~~ls~~~~~~L~~~l~~~~~lv~~~~~v~~lR 135 (135)
T 3qoc_A 75 -PDIESLMARNCAPA---LLS-DI------NGPKRVGFEADYLSVSQCEELRKSAGSDVELIPVTGAIEKLR 135 (135)
T ss_dssp -TTSEEEECSSHHHH---HHH-TC------CSSEEEEEETTTSBHHHHHHHHHHSCTTEEEEEECSCC----
T ss_pred -CCcEEEEeCcHHHH---HHh-cC------cCCCeEEECCCcccHHHHHHHHHhccCCcEEEECccHHHHhC
Confidence 36777777654332 332 11 2467999999999998877653 3 47888888888876
No 55
>3ovk_A Aminopeptidase P, XAA-Pro dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.00A {Streptococcus pyogenes}
Probab=99.22 E-value=2.6e-11 Score=109.10 Aligned_cols=121 Identities=17% Similarity=0.244 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECCceEEEEeCCCCCHHHHHhhhhCCeEE
Q 006890 168 VVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFLKESGVEV 247 (627)
Q Consensus 168 ~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~~~~L~v~~~~~~~~~~~~l~~~~v~v 247 (627)
+.+|++++|+.|+++++|+++++++.|++||||++|++ ++++++.++++|++|.++..++.++ . .+.++
T Consensus 8 ~~~Rl~~l~~~m~~~~~da~li~~~~n~~YltGf~~~~--------~~~vv~~~~~~l~td~ry~~qa~~~-~--~~~~v 76 (132)
T 3ovk_A 8 LEQRLGHCLRQMAEKGLEALLVTHLTNSYYLTGFSGTA--------ATVLITAKRRVLITDSRYTLLAKAS-V--EGFDI 76 (132)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECSHHHHHHHHCCCCSC--------CEEEEESSCEEEEECTTTHHHHHHH-C--TTCEE
T ss_pred HHHHHHHHHHHHHHCCCCEEEEcCcccceeeeCccCCC--------EEEEEECCccEEEECchhHHHHHHh-C--CCcEE
Confidence 46899999999999999999999999999999999865 6788899999999999887655333 2 45778
Q ss_pred eeCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhc----CCCeEEecCCccchhh
Q 006890 248 RDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKL----NSDKVLLQQSPLALAK 308 (627)
Q Consensus 248 ~~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l----~~~~~~~~~~~i~~~r 308 (627)
..|.+..+.+..+... .++++||+|.. +|+..+..| +..++++.++++..+|
T Consensus 77 ~~~~~~~~~l~~~l~~--------~~~~~ig~e~~-~~~~~~~~L~~~l~~~~~v~~~~~v~~lR 132 (132)
T 3ovk_A 77 IESRTPLKVVAELLEA--------DQIDCLGFEDQ-VSFSFYQAMQAELSGITLLAQSGFVEHLR 132 (132)
T ss_dssp EECSCHHHHHHHHHHH--------HTCCEEEEETT-SBHHHHHHHHHHCTTCEEEEESSTTGGGC
T ss_pred EEeCCCHHHHHHHHHH--------cCCCEEEEcCC-CCHHHHHHHHhhCCCCeEEECchHHHHhC
Confidence 8886543333333221 13578999999 999887765 4458899988888887
No 56
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...
Probab=99.17 E-value=2.5e-11 Score=131.70 Aligned_cols=336 Identities=13% Similarity=0.115 Sum_probs=184.1
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCCCcCc---cCcCccccccccccccccCceEEEEeC-----CceEEEEcchhHHH
Q 006890 2 AEILAALRSLMSSHDPPLHALVVPSEDYHQS---EYVSARDKRREFVSGFTGSAGLALITM-----NEALLWTDGRYFLQ 73 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~s---ey~~~~~~~~~ylTGFtgs~g~~vvt~-----~~a~l~tD~RY~~q 73 (627)
.+|+++||+.|++++ +++|++++|...+ +|.=-.+.|++|||||....++++|+. ++++||++.++..+
T Consensus 9 ~~R~~~l~~~m~~~~---~~ll~~~~~~~r~~D~~y~frq~~n~~YltG~~~~~~~lvi~~~~~~~~~~~Lf~~~~~~~~ 85 (440)
T 2v3z_A 9 QRRRQALVEQMQPGS---AALIFAAPEVTRSADSEYPYRQNSDFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRVRDLTA 85 (440)
T ss_dssp HHHHHHHHHHSCSSE---EEEEECCCCCEEETTEECCCCCCHHHHHHHCCCCSSCEEEEEECSSSCEEEEEEECCCCHHH
T ss_pred HHHHHHHHHhcccCC---EEEEECCCccccCCCCCCcccCCCCEEEecCCCCCCEEEEEEecCCCCceEEEEecCCCccc
Confidence 579999999999863 7888887643222 333233478999999999888888875 36899998865443
Q ss_pred -----------HhccccCcE-EEEEcCCCCCHHHHHHhhCCCCCEEEEcCCCC------CHHHHHHHHHHHHh---cCCe
Q 006890 74 -----------ATQELTGEW-KLMRMLEDPAVDVWMANNLPNDAAIGVDPWCV------SIDTAQRWERAFAK---KQQK 132 (627)
Q Consensus 74 -----------A~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~vg~d~~~~------s~~~~~~l~~~l~~---~~~~ 132 (627)
+..+... + .+.... .+.+.|.+.+...++|+++.... +...+..+.+.+.. .+.+
T Consensus 86 ~~w~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 161 (440)
T 2v3z_A 86 EIWFGRRLGQDAAPEKLG-VDRALAFS---EINQQLYQLLNGLDVVYHAQGEYAYADVIVNSALEKLRKGSRQNLTAPAT 161 (440)
T ss_dssp HHHHCCCCHHHHHHHHHT-CSEEEEGG---GHHHHHHHHHTTCSEEECCTTSCHHHHHHHHHHHHHHHTCGGGTCCCCSE
T ss_pred ceecCCCCCHHHHHHhcC-CCEEeeHH---HHHHHHHHHHcCCCEEEEeCCcccchhHHHHHHHHHHhhhcccccCCcce
Confidence 2122211 1 222221 24556666555557899987542 22233334332211 2357
Q ss_pred EEecCcChhhHhhhcCCCCCCCccccccccccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcce
Q 006890 133 LVQTSTNLVDKVWKNRPPVETYPVTVQQIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVV 212 (627)
Q Consensus 133 l~~~~~~lid~lr~~k~~~e~~~i~~~~~~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~ 212 (627)
+++. .+++..+|.+|++.| |+.+|++.+... ..+.... .|+ + |
T Consensus 162 ~~~~-~~~i~~~R~iKs~~E-------------------i~~~r~A~~i~~--~a~~~~~---~~i---~-------~-- 204 (440)
T 2v3z_A 162 MIDW-RPVVHEMRLFKSPEE-------------------IAVLRRAGEITA--MAHTRAM---EKC---R-------P-- 204 (440)
T ss_dssp EECC-HHHHHHHHHSCCHHH-------------------HHHHHHHHHHHH--HHHHHHH---HHC---C-------T--
T ss_pred eeeH-HHHHHHHHhcCCHHH-------------------HHHHHHHHHHHH--HHHHHHH---Hhc---c-------C--
Confidence 8887 789999999999998 777776654311 1110000 111 0 1
Q ss_pred eEEEEEECCceEEEEeCCCCCHHHHHhhhhCCeEEeeCCchhHHHHHHhhccCCC--CCC-----CCCCCEEEEcCCCCc
Q 006890 213 HAFAIVTTNAAFLYVDKRKVSSEVISFLKESGVEVRDYDAVSSDVVLLQSNQLNP--PAD-----VQGSDLIWADPNSCS 285 (627)
Q Consensus 213 ~a~~lv~~~~~~L~v~~~~~~~~~~~~l~~~~v~v~~y~~~~~~~~~~~~~~l~~--~~~-----~~~~~~I~iD~~~~~ 285 (627)
.+++.++...+...+...|....+|..+ ++++.+.. |.. ...++.|.+|.+. .
T Consensus 205 -------------G~tE~el~~~~~~~~~~~G~~~~~f~~i------v~~G~n~~~~H~~~~~~~l~~gd~vliD~G~-~ 264 (440)
T 2v3z_A 205 -------------GMFEYHLEGEIHHEFNRHGARYPSYNTI------VGSGENGCILHYTENECEMRDGDLVLIDAGC-E 264 (440)
T ss_dssp -------------TCBHHHHHHHHHHHHHHTTCCEESSCCE------EEEGGGGGSTTCCCCCSBCCTTCEEEEEECE-E
T ss_pred -------------CCcHHHHHHHHHHHHHHcCCCcCCCCCe------EEEcCccccccCCCCCccccCCCEEEEEeeE-E
Confidence 1344455555555566677776778776 44343333 321 1467889999862 1
Q ss_pred HHHHhhcCCC--eEEec-CCccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccc
Q 006890 286 YALYSKLNSD--KVLLQ-QSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKH 362 (627)
Q Consensus 286 ~~~~~~l~~~--~~~~~-~~~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (627)
+ ...... ..+.. ..+ ++. .|++..+.-.++...++.
T Consensus 265 ~---~gy~sD~tRT~~v~G~~--------~~~----~~~~y~~v~~a~~~~i~~-------------------------- 303 (440)
T 2v3z_A 265 Y---KGYAGDITRTFPVNGKF--------TQA----QREIYDIVLESLETSLRL-------------------------- 303 (440)
T ss_dssp E---TTEECCEEEEEETTSCC--------CHH----HHHHHHHHHHHHHHHHHH--------------------------
T ss_pred E---CCEEEeeEEEEEeCCCC--------CHH----HHHHHHHHHHHHHHHHHH--------------------------
Confidence 1 111111 11111 111 222 344554545555544443
Q ss_pred CCCCCcCHHHHHHHHHHHHHh---hcCCC-------------CCcCCccc--ccCCCc-ccccccCCCCccCCCCCCCeE
Q 006890 363 SGTVKLTEVTVSDKLESFRAS---KEHFR-------------GLSFPTIS--SVGPNA-AIMHYSPQSETCAEMDPNSIY 423 (627)
Q Consensus 363 ~~~~g~tE~ei~~~l~~~~~~---~~g~~-------------~~~f~~i~--~~G~n~-a~~h~~~~~~~~~~l~~gd~v 423 (627)
.+||++-.++...+.+...+ ..|.. ..-|..-+ +.|-.- ..|++.+. .+.+|++|-++
T Consensus 304 -~~pG~~~~~v~~~~~~~~~~~l~~~G~~~g~~~~~~~~~~~~~~~~Hg~GHgiGl~~he~p~~~~~--~~~~L~~Gmv~ 380 (440)
T 2v3z_A 304 -YRPGTSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLGLDVHDVGVYGQD--RSRILEPGMVL 380 (440)
T ss_dssp -CCTTCCHHHHHHHHHHHHHHHHHHHTSSCSCHHHHHHTTTTTTTCCSCSCCBCSSSSSCCSCCCGG--GCCCCCTTCEE
T ss_pred -hcCCCcHHHHHHHHHHHHHhhhhccCcccCchhhhhhhhccccccCCCCCCcCCcccccCCCcCCC--CCCccCCCCEE
Confidence 37899998888887665432 11210 11121111 122110 12333222 34799999999
Q ss_pred EEeecceecC----------cccceEEEEecC
Q 006890 424 LCDSGAQYQD----------GTTDITRTFHFG 445 (627)
Q Consensus 424 liD~g~~y~g----------y~~D~tRT~~~G 445 (627)
.+.-|....+ +..-+.-|+.+.
T Consensus 381 tiEPgiy~~~~~~~~~~~~~~GvriEd~vlVt 412 (440)
T 2v3z_A 381 TVAPGLYIAPDAEVPEQYRGIGIRIEDDIVIT 412 (440)
T ss_dssp EECCEEEECTTCSSCGGGTTEEEECBEEEEEE
T ss_pred EECCEEEeCCccccccccceeEEEEeeEEEEC
Confidence 9998876653 344555566663
No 57
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis}
Probab=99.15 E-value=4.1e-11 Score=128.88 Aligned_cols=333 Identities=11% Similarity=0.070 Sum_probs=193.0
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCCCc----CccCcCccccccccccccccCceEEEEeCC----ceEEEE-------
Q 006890 2 AEILAALRSLMSSHDPPLHALVVPSEDYH----QSEYVSARDKRREFVSGFTGSAGLALITMN----EALLWT------- 66 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h----~sey~~~~~~~~~ylTGFtgs~g~~vvt~~----~a~l~t------- 66 (627)
.+|.++|.+.|.++ ..+|+++.++. -.+|.=-++.|.+|||||+++.++++++.+ +..||+
T Consensus 7 ~~RR~~l~~~l~~~----~~~i~~~~~~~~~~~d~~~~frq~s~f~YltG~~~~~~~~v~~~~~~~~~~~lfv~~~~~~~ 82 (427)
T 3ig4_A 7 AQNRERLVNTLPDE----SITILFAGQAPHMSADAHYKFVPNRNFYYVTGIDEPNVIFMLKKFGNSVEETLFIEKSDPVM 82 (427)
T ss_dssp HHHHHHHHTTSCSS----EEEEEECCCCCEEETTEECCCCCCHHHHHHHCCCSTTCEEEEEEETTEEEEEEEECCCCTTG
T ss_pred HHHHHHHHHhCcCC----CEEEEECCCccccCCCCCCcccCCCCeEEeeCCCCCCEEEEEEccCCCceEEEEecCCCccc
Confidence 46777787777653 34555555431 234655667899999999999988888652 345555
Q ss_pred ----cchhHHHHhccccCcE-EEEEcCCCCCHHHHHHhhCCC--CCEEEEcCC--------CCCHHHHHHHHHHHHhcCC
Q 006890 67 ----DGRYFLQATQELTGEW-KLMRMLEDPAVDVWMANNLPN--DAAIGVDPW--------CVSIDTAQRWERAFAKKQQ 131 (627)
Q Consensus 67 ----D~RY~~qA~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~--~~~vg~d~~--------~~s~~~~~~l~~~l~~~~~ 131 (627)
+.||..|+.++..+ + .+... + .+.+.|.+.+.. .++|+++.. .+++..++.|++.++ +.
T Consensus 83 ~~w~g~r~~~~~a~~~~~-~~~v~~~-~--~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~ 156 (427)
T 3ig4_A 83 EKWVGKTVSNEEAEKISG-IKKVIYL-D--SFEKTMSNIFFTENVKHLYLDLECREWKGTETKTLAFAKHVREQYP--HV 156 (427)
T ss_dssp GGTTCCCCCHHHHHHHHC-CSEEEEG-G--GHHHHHHHHHTTTCCCEEEECCCCCCTTCCCCHHHHHHHHHHHHCT--TC
T ss_pred eEEeCCCCcHHHHHhcCC-CCEEEEh-h--hHHHHHHHHHhcCCCcEEEEeCCccccccccccCHHHHHHHHhhCC--CC
Confidence 47999888777654 2 23322 2 244556666554 578999853 345678888888764 47
Q ss_pred eEEecCcChhhHhhhcCCCCCCCccccccccccCCcHHHHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcc
Q 006890 132 KLVQTSTNLVDKVWKNRPPVETYPVTVQQIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPV 211 (627)
Q Consensus 132 ~l~~~~~~lid~lr~~k~~~e~~~i~~~~~~~~G~~~~~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~ 211 (627)
+++++ +.++..+|.+|++.| |+.+|++.+... ..+.... .+ ++ |
T Consensus 157 ~~~~~-~~~i~~lR~iKs~~E-------------------I~~mr~A~~i~~--~a~~~~~---~~---i~-------p- 200 (427)
T 3ig4_A 157 TIGNV-YPNICELRVFKTDEE-------------------IEIIKEAIAVTK--DGIYNVL---KH---AK-------A- 200 (427)
T ss_dssp EEEEC-HHHHHHHHTSCCHHH-------------------HHHHHHHHHHHH--HHHHHHH---HH---CC-------S-
T ss_pred eEeEh-HHHHHHHHhcCCHHH-------------------HHHHHHHHHHHH--HHHHHHH---HH---cc-------C-
Confidence 89988 889999999999998 777776654311 1110000 00 00 1
Q ss_pred eeEEEEEECCceEEEEeCCCCCHHHHHhhhhCCeEEeeCCchhHHHHHHhhccCCC--CCCC-----CCCCEEEEcCCCC
Q 006890 212 VHAFAIVTTNAAFLYVDKRKVSSEVISFLKESGVEVRDYDAVSSDVVLLQSNQLNP--PADV-----QGSDLIWADPNSC 284 (627)
Q Consensus 212 ~~a~~lv~~~~~~L~v~~~~~~~~~~~~l~~~~v~v~~y~~~~~~~~~~~~~~l~~--~~~~-----~~~~~I~iD~~~~ 284 (627)
.+++.++...++..+...|....+|..+ ++++.+.. |..+ ..++.|.+|.+.
T Consensus 201 --------------G~tE~el~~~~~~~~~~~G~~~~~f~~i------vasG~n~~~~H~~~~~~~l~~GdlvliD~G~- 259 (427)
T 3ig4_A 201 --------------DMMEYELEAQFDFTLKSSGIKHHAFNTI------LASGKNATVLHYEDNDAQIQNGDLVLLDLGA- 259 (427)
T ss_dssp --------------SEEHHHHHHHHHHHHHHTTCCEESSCCE------EEEGGGGGSTTCCCCCSEECTTCEEEEEECE-
T ss_pred --------------CCCHHHHHHHHHHHHHHcCCCCCCCCCE------EEECccccccccCcccccCCCCCEEEEEeee-
Confidence 2455666666666666778777778776 44444433 3321 467888999863
Q ss_pred cHHHHhhcCCC--eEEec-CCccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccc
Q 006890 285 SYALYSKLNSD--KVLLQ-QSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKK 361 (627)
Q Consensus 285 ~~~~~~~l~~~--~~~~~-~~~i~~~r~iK~~~Ei~~~r~A~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 361 (627)
.+ ...... ..+.. ..+ ++. .|++..+.-.|....++.
T Consensus 260 ~~---~gY~sDitRT~~v~G~~--------s~~----~~~~y~~vl~a~~~~i~~------------------------- 299 (427)
T 3ig4_A 260 QK---DYYNADISYTFPANGTF--------SSR----QKQIYNIVLNALKETTEI------------------------- 299 (427)
T ss_dssp EE---TTEECCEEEEEETTSCC--------CHH----HHHHHHHHHHHHHHHHHT-------------------------
T ss_pred EE---CcEEEEEEEEEecCCCC--------CHH----HHHHHHHHHHHHHHHHHH-------------------------
Confidence 11 111111 11111 111 222 244444444444444333
Q ss_pred cCCCCCcCHHHHHHHHHHHHHhh---cCCC------CCcCCcccccCCCcccccccCCCCccCCCCCCCeEEEeecceec
Q 006890 362 HSGTVKLTEVTVSDKLESFRASK---EHFR------GLSFPTISSVGPNAAIMHYSPQSETCAEMDPNSIYLCDSGAQYQ 432 (627)
Q Consensus 362 ~~~~~g~tE~ei~~~l~~~~~~~---~g~~------~~~f~~i~~~G~n~a~~h~~~~~~~~~~l~~gd~vliD~g~~y~ 432 (627)
.+||++-.++...+.+...+. .|+. +.-|..-++-|- +--.|-.|. ..+.+|++|-++.+.-|....
T Consensus 300 --~kpG~~~~di~~~a~~~i~~~~~~~G~~~~~~~~~~~~~Hg~GH~i-Gl~vhe~~~-~~~~~L~~GMV~tiEPgiy~~ 375 (427)
T 3ig4_A 300 --IKPGLKFAALNEHAKKVLAEGCKAVGLIQEDEELSKYYYHGVSHFL-GLDTHDVGT-YKDRVLEEGMVITIEPGLYIE 375 (427)
T ss_dssp --CCTTCBTHHHHHHHHHHHHHHHHHHTSCSSGGGGGGTCCSCSCCBC-SSSSSCCCC-CTTCBCCTTCEEEECCEEEEG
T ss_pred --ccCCCcHHHHHHHHHHHHHHhHhhcCCccCcchhhccCCCCCCCcC-CcCCCcCCC-CCCCEeCCCCEEEECCEEEEC
Confidence 378999999988887755332 1221 111211111111 112454443 345899999999999987654
Q ss_pred --CcccceEEEEecC
Q 006890 433 --DGTTDITRTFHFG 445 (627)
Q Consensus 433 --gy~~D~tRT~~~G 445 (627)
|+..-+.-|+++.
T Consensus 376 ~~g~GvriEd~vlVt 390 (427)
T 3ig4_A 376 EESIGIRIEDDILVT 390 (427)
T ss_dssp GGTEEEECBEEEEEC
T ss_pred CCceEEEEeeEEEEe
Confidence 3344566677774
No 58
>3o5v_A X-Pro dipeptidase; creatinase, N-terminal, PSI, MCSG, structural G midwest center for structural genomics; 1.85A {Streptococcus pyogenes m1 gas}
Probab=99.14 E-value=3.5e-11 Score=108.29 Aligned_cols=126 Identities=15% Similarity=0.130 Sum_probs=92.5
Q ss_pred HHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECC-ceEEEEeCCCCCHHHHHhhhhCCeEEe
Q 006890 170 EKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTN-AAFLYVDKRKVSSEVISFLKESGVEVR 248 (627)
Q Consensus 170 ~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~-~~~L~v~~~~~~~~~~~~l~~~~v~v~ 248 (627)
+|++++|+.|+++|+|+++++++.|++||||++|+... .| .+++|+.+ +++|+++.++..++.++ . +.++.
T Consensus 3 ~Rl~~l~~~m~~~glDa~li~~~~ni~YltGf~~~~~e-r~---~~l~v~~~g~~~l~~~~~y~~~a~~~---~-~~~i~ 74 (132)
T 3o5v_A 3 AKLDQIRLYLDQKGAELAIFSDPVTINYLTGFFCDPHE-RQ---LFLFVYHDLAPVLFVPALEVARASQA---I-SFPVF 74 (132)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCHHHHHHHHSCCCCCTT-SC---CEEEEESSSCCEEEEEGGGHHHHHHH---C-CSCEE
T ss_pred HHHHHHHHHHHHCCCCEEEEcCcchhhHhhCCCCCCcc-ce---EEEEEeCCCCEEEEeehhhhHHHHhc---C-CCcEE
Confidence 69999999999999999999999999999999986421 12 57888865 79999999886654332 1 56778
Q ss_pred eCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcCC---CeEEecCCccchhh
Q 006890 249 DYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNS---DKVLLQQSPLALAK 308 (627)
Q Consensus 249 ~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~~---~~~~~~~~~i~~~r 308 (627)
.|.+..++...++ ..+.. ....+||+|...+|+..++.|.+ .++++++..+..+|
T Consensus 75 ~~~d~~~~~~~l~-~~l~~----~~~~~ig~e~~~~~~~~~~~L~~~~~~~~~~~~~~v~~lR 132 (132)
T 3o5v_A 75 GYVDSENPWEKIK-AVLPN----TAAKTIYAEFDHLNVNKFHGLQTIFSGQFNNLTPYVQGMR 132 (132)
T ss_dssp EECTTSCHHHHHH-HHCSC----CCCSEEEECTTTCCHHHHHHHHTTCCSEEEECHHHHHTC-
T ss_pred EEECCCCHHHHHH-HHHhh----ccCCeEEEecCCCCHHHHHHHHHhCCCceeccHHHHHHhC
Confidence 8866544444343 22322 13468999988899988877644 57888877777765
No 59
>3ooo_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; HET: MSE; 1.57A {Streptococcus agalactiae} PDB: 3peb_A*
Probab=99.12 E-value=4.9e-11 Score=107.26 Aligned_cols=126 Identities=16% Similarity=0.123 Sum_probs=92.5
Q ss_pred HHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECC-ceEEEEeCCCCCHHHHHhhhhCCeEEe
Q 006890 170 EKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTN-AAFLYVDKRKVSSEVISFLKESGVEVR 248 (627)
Q Consensus 170 ~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~-~~~L~v~~~~~~~~~~~~l~~~~v~v~ 248 (627)
+|++++|+.|+++|+|+++++++.|++||||+.|+.. ..| .+++|+.+ +++|+++.++..++.++ . +.++.
T Consensus 3 ~Rl~~l~~~m~~~glDa~li~~~~ni~YlTGf~~~~~-er~---~~l~v~~~g~~~l~~~~~y~~~a~~~---~-~~~v~ 74 (132)
T 3ooo_A 3 SKLNRIRHHLHSVQAELAVFSDPVTVNYLTGFFCDPH-ERQ---MFLFVYEDRDPILFVPALEVSRAKQS---V-PFPVF 74 (132)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCHHHHHHHHSCCCCCT-TSC---CEEEEESSSCCEEEEEGGGHHHHHHH---C-SSCEE
T ss_pred hHHHHHHHHHHHCCCCEEEEcCcchHHHHhCCCCCCC-cce---EEEEEeCCCCEEEEEeccchHHHHhc---C-CCcEE
Confidence 6999999999999999999999999999999997641 122 36778765 79999999886654333 2 56778
Q ss_pred eCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcCC---CeEEecCCccchhh
Q 006890 249 DYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNS---DKVLLQQSPLALAK 308 (627)
Q Consensus 249 ~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~~---~~~~~~~~~i~~~r 308 (627)
.|.+..++...++. .+.. .+..+||+|...+|+..++.|.+ .++++++..+..+|
T Consensus 75 ~~~d~~~~~~~l~~-~l~~----~~~~~ig~e~~~~~~~~~~~L~~~~~~~~~~~~~~v~~lR 132 (132)
T 3ooo_A 75 GYIDSENPWQKIAS-NLPS----FSVSKVLAEFDNLNVTKFQGLQTVFDGHFENLTPYIQNMR 132 (132)
T ss_dssp EECTTSCHHHHHHH-HCSC----CCCSEEEECTTTCCHHHHHHHHHHCCSEEEECCHHHHTTC
T ss_pred EEeCCCCHHHHHHH-HHhh----ccCCeEEEecCCcCHHHHHHHHHhCCcceechHHHHHhcC
Confidence 88654444443432 2322 13468999988899988776543 68888888887776
No 60
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens}
Probab=99.09 E-value=2.6e-11 Score=136.69 Aligned_cols=127 Identities=14% Similarity=0.137 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEcCCCCcCccCcCccccccccccccccC--------ceEEEEeCCceEEEEcchhHH-
Q 006890 2 AEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGS--------AGLALITMNEALLWTDGRYFL- 72 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~sey~~~~~~~~~ylTGFtgs--------~g~~vvt~~~a~l~tD~RY~~- 72 (627)
.+|+++||+.|++++ +|++||+++ .++.||+||+|+ .++++|+.+++.||+|.++..
T Consensus 179 ~~rl~~lr~~m~e~~--~dallit~~------------~~i~yl~~~~G~dv~~~pi~~~~llv~~~~~~l~v~~~~~~~ 244 (623)
T 3ctz_A 179 KDKVADLRLKMAERN--VMWFVVTAL------------DEIAWLFNLRGSDVEHNPVFFSYAIIGLETIMLFIDGDRIDA 244 (623)
T ss_dssp HHHHHHHHHHHHTTT--EEEEEECCH------------HHHHHHHTEECCSSSSSCCCSCEEEEESSCEEEECCSGGGGS
T ss_pred HHHHHHHHHHHHHcC--CCEEEECCH------------HHHHHHhCCCCccCCCCcceeEEEEEecCCcEEEEechhcCH
Confidence 579999999999987 999999999 799999999986 267999999999999998754
Q ss_pred -HHhcccc--------CcEEEEEcCCCCCHHHHHHhhCC---CCCEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcCh
Q 006890 73 -QATQELT--------GEWKLMRMLEDPAVDVWMANNLP---NDAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNL 140 (627)
Q Consensus 73 -qA~~~~~--------~~~~~~~~~~~~~~~~~l~~~l~---~~~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~l 140 (627)
+++..+. ..+++..+.+ +.+.|.+... ..++||+|+. +++..++ .++. ..++++. .++
T Consensus 245 ~~~~~~l~~~~~~p~~~~v~v~~y~~---~~~~l~~l~~~~~~~~~i~id~~-~~~~l~~----~l~~-~~~~v~~-~~~ 314 (623)
T 3ctz_A 245 PSVKEHLLLDLGLEAEYRIQVHPYKS---ILSELKALCADLSPREKVWVSDK-ASYAVSE----TIPK-DHRCCMP-YTP 314 (623)
T ss_dssp HHHHHHTTTTSCCCGGGCEEEECGGG---HHHHHHHHHHTCCTTCEEEEETT-SBHHHHH----HSCG-GGEEEES-SCH
T ss_pred HHHHHHHhhccccccCCceEEEEhHH---HHHHHHHHHhcccCCeEEEECch-hhHHHHH----hccc-cceEEec-ccH
Confidence 5555542 2356553322 3455554432 2368999987 5655444 3322 2367777 789
Q ss_pred hhHhhhcCCCCC
Q 006890 141 VDKVWKNRPPVE 152 (627)
Q Consensus 141 id~lr~~k~~~e 152 (627)
+..+|.+|++.|
T Consensus 315 i~~~R~iK~~~E 326 (623)
T 3ctz_A 315 ICIAKAVKNSAE 326 (623)
T ss_dssp HHHHHHSCCHHH
T ss_pred HHHHHhcCCHHH
Confidence 999999999998
No 61
>3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metall peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis}
Probab=99.00 E-value=2.4e-10 Score=103.79 Aligned_cols=130 Identities=10% Similarity=0.081 Sum_probs=91.3
Q ss_pred HHHHHHHHHhhccCCcEEEEecCCccceEEccccCCCCCCcceeEEEEEECC-ceEEEEeCCCCCHHHHHhhhhCCeEEe
Q 006890 170 EKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTN-AAFLYVDKRKVSSEVISFLKESGVEVR 248 (627)
Q Consensus 170 ~ri~~lr~~m~~~~~d~lll~~~dni~wLtg~rg~d~~~~P~~~a~~lv~~~-~~~L~v~~~~~~~~~~~~l~~~~v~v~ 248 (627)
.|++++|+.|+++|+|+++++++.|+.|||||.|+.. ..| .+++|+.+ +++|+++.++..++.++ ..+.++.
T Consensus 4 ~Rl~~l~~~m~~~glDa~li~~~~ni~YlTGf~~~~~-er~---~~llv~~~g~~~l~~~~~~~~~a~~~---~~~~~i~ 76 (140)
T 3i7m_A 4 TKLEQIQQWTAQHHASMTYLSNPKTIEYLTGFGSDPI-ERV---LALVVFPDQDPFIFAPALEVEVIKET---GWQFPVI 76 (140)
T ss_dssp CHHHHHHHHHHHTTCSEEEECCHHHHHHHHCCCCCCC-SSC---CEEEECSSSCCEEEEEGGGHHHHHTT---TCCSCEE
T ss_pred hHHHHHHHHHHHcCCCEEEECCCCcceeecCCCCCCc-cce---EEEEEeCCCCEEEEEecccHHHHHhc---cCcCcEE
Confidence 3899999999999999999999999999999997642 122 46778755 79999999876544222 2456777
Q ss_pred eCCchhHHHHHHhhccCCCCCCCCCCCEEEEcCCCCcHHHHhhcC----CCeEE-ecCCccchhhh
Q 006890 249 DYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLN----SDKVL-LQQSPLALAKA 309 (627)
Q Consensus 249 ~y~~~~~~~~~~~~~~l~~~~~~~~~~~I~iD~~~~~~~~~~~l~----~~~~~-~~~~~i~~~r~ 309 (627)
.|.+..++...++. .+...+ ...++||+|...+++..++.|. +.+++ +++..+..+|+
T Consensus 77 ~~~d~~~~~~~l~~-~l~~~~--~~~~~ig~e~~~~~~~~~~~L~~~l~~~~~v~~~~~~i~~lR~ 139 (140)
T 3i7m_A 77 GYLDHENPWAMIAD-QVKQRH--VNPEHVAIEKGQLQVARMEALAAQFSAPSFDLDITSFIEHMRG 139 (140)
T ss_dssp EECTTSCHHHHHHH-HHHHTT--CCCSEEEECTTTSCHHHHHHHHTTSSSCEEEEECHHHHHHC--
T ss_pred EEcCCCCHHHHHHH-HHHHhC--CCCCeEEEccCCCCHHHHHHHHHHCCCCEEecCHHHHHHHHHc
Confidence 77654333322221 111110 1357899998889998887664 45888 98888888886
No 62
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A
Probab=97.96 E-value=1.3e-06 Score=95.90 Aligned_cols=69 Identities=10% Similarity=0.067 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHhcCCC--CceEEEEcCCCC-----cCccCcCccccccccccccccCceEEEEeC--CceEEEEcchh
Q 006890 2 AEILAALRSLMSSHDP--PLHALVVPSEDY-----HQSEYVSARDKRREFVSGFTGSAGLALITM--NEALLWTDGRY 70 (627)
Q Consensus 2 ~~Rl~~Lr~~m~~~~~--~~Da~li~~~d~-----h~sey~~~~~~~~~ylTGFtgs~g~~vvt~--~~a~l~tD~RY 70 (627)
.+|+++|++.|++++. +.|++||++... .-++|.-..+.+.+|||||.....++||.. ++..||++.+.
T Consensus 25 ~~Rr~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~~d~~y~frq~s~f~YLtG~~~p~~~~vi~~~~~~~~L~~~~~~ 102 (494)
T 2iw2_A 25 ALNRQRLCERLRKNPAVQAGSIVVLQGGEETQRYCTDTGVLFRQESFFHWAFGVTEPGCYGVIDVDTGKSTLFVPRLP 102 (494)
T ss_dssp HHHHHHHHHHHHHCTTCCTTCEEEEECCCCEESTTSCCEECCCCCHHHHHHHCCCSSSCEEEEETTTCCEEEEECCCC
T ss_pred HHHHHHHHHHHHhhhcccCceEEEEeCCcceeecCCCCCCCccCCcceeeecCCCCCCeEEEEEccCCeEEEEECCCC
Confidence 5799999999998640 146999977654 235565556678999999998777777743 67889986544
No 63
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii}
Probab=97.52 E-value=1.1e-05 Score=87.07 Aligned_cols=137 Identities=11% Similarity=0.116 Sum_probs=74.7
Q ss_pred HHHHHHHHHHhcCCCCceEEEEcCCCCcC-----ccCcCcccccccccccccc-CceEEEEeCC-ceEEEEcch--hHHH
Q 006890 3 EILAALRSLMSSHDPPLHALVVPSEDYHQ-----SEYVSARDKRREFVSGFTG-SAGLALITMN-EALLWTDGR--YFLQ 73 (627)
Q Consensus 3 ~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~-----sey~~~~~~~~~ylTGFtg-s~g~~vvt~~-~a~l~tD~R--Y~~q 73 (627)
++.+++|++|++.+ .|+++|.++.+.. .+|.=..+.+-+|+|||.- ..+++++..+ ++.||.... |+..
T Consensus 14 ~~~~r~~~~l~~~~--~~~~~i~~~~~~~~~~~D~~~~frq~~~f~yl~g~~e~p~~~L~~~~~~~~~l~~~~~~d~w~~ 91 (451)
T 3rva_A 14 ELQARTREALQREG--LDGLVIHSGQGKRLFLDDNHYPFKVNPQFKAWVPVIDNPNCWLVVNGVDKPTLIFYRPEDFWHK 91 (451)
T ss_dssp HHHHHHHHHHHHHT--CSEEEEECCCCCBCTTSSCBCCCCCCHHHHTTCSCCSCSSCEEEECSSSCCEEEEECCCCTTSC
T ss_pred HHHHHHHHHHHhCC--CCEEEEECCCceEEecCCCCCCcccCCCceEEeccCCCCCEEEEEecCCCeEEEeeccHHhhhc
Confidence 46788999999887 9988887663221 2333344555678889976 4456666443 556665432 3332
Q ss_pred Hhc---cc-cCcEEEEEcCCCCCHHHHHHhhCCCC-CEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhhcC
Q 006890 74 ATQ---EL-TGEWKLMRMLEDPAVDVWMANNLPND-AAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNR 148 (627)
Q Consensus 74 A~~---~~-~~~~~~~~~~~~~~~~~~l~~~l~~~-~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~~k 148 (627)
.+. +. ...+.+....... + +.+.|+.. .++++.+...+...+..+ ....++++ .++|+++|.+|
T Consensus 92 ~~~~~~~~~~~~~~v~~~~~~~---~-~~~~l~~~~~~~~~~g~~~~~~~~~~~------~~~~~~~~-~~~l~~lR~iK 160 (451)
T 3rva_A 92 VPPEPNDFWTDSFDIKLLQQAD---A-VEKFLPYDKSRFAYVGEYIEVAKALGF------DNVNPDRV-LHYLHYQRAYK 160 (451)
T ss_dssp CCCSCCSTTGGGSEEEEESSGG---G-GGGGSCSCGGGEEEESSCHHHHHHHTC------SCBSCHHH-HHHHHHHHTSC
T ss_pred cccCcchhHHhccCeEEEecHH---H-HHHHHhhccCceEEEccCcCHHHhhhh------cccCchHH-HHHHHHHHhcC
Confidence 211 11 0012333222111 1 33444432 346666544443222111 12345566 68899999999
Q ss_pred CCCC
Q 006890 149 PPVE 152 (627)
Q Consensus 149 ~~~e 152 (627)
++.|
T Consensus 161 s~~E 164 (451)
T 3rva_A 161 TDYE 164 (451)
T ss_dssp CHHH
T ss_pred CHHH
Confidence 9998
No 64
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A*
Probab=97.29 E-value=2.7e-05 Score=85.08 Aligned_cols=137 Identities=10% Similarity=0.073 Sum_probs=74.1
Q ss_pred HHHHHHHHHHhcCCCCceEEEEcCCCCcC-----ccCcCcccccccccccccc-CceEEEEeCC-ceEEEEcch--hHHH
Q 006890 3 EILAALRSLMSSHDPPLHALVVPSEDYHQ-----SEYVSARDKRREFVSGFTG-SAGLALITMN-EALLWTDGR--YFLQ 73 (627)
Q Consensus 3 ~Rl~~Lr~~m~~~~~~~Da~li~~~d~h~-----sey~~~~~~~~~ylTGFtg-s~g~~vvt~~-~a~l~tD~R--Y~~q 73 (627)
++.++++++|++.+ .|+++|.+..+.. .+|.=..+.+-+|+|||+- ..+++++..+ ++.||.... |+..
T Consensus 14 ~~~~r~~~~l~~~~--~~~~~i~~~~~~~~~~~D~~~pFrq~s~F~yl~g~~e~p~~~l~~~~~~~~~l~~~~~~d~w~g 91 (517)
T 3l24_A 14 TLQKRTREIIEREN--LDGVVFHSGQAKRQFLDDMYYPFKVNPQFKAWLPVIDNPHCWIVANGTDKPKLIFYRPVDFWHK 91 (517)
T ss_dssp HHHHHHHHHHHHTT--CSEEEEECCCCCBCTTSSCBCCCCCCHHHHTTSSCCSCSSCEEEECSSSCCEEEEECCCCSSSC
T ss_pred HHHHHHHHHHHhCC--CCEEEEECCCceEEecCCCCCCceecCCceEEeccCCCCCEEEEEecCCCeEEEEecchhhhhc
Confidence 46788999999987 9988777663321 2344445556678999976 4556666433 556665432 3332
Q ss_pred Hhc---cc-cCcEEEEEcCCCCCHHHHHHhhCCCC-CEEEEcCCCCCHHHHHHHHHHHHhcCCeEEecCcChhhHhhhcC
Q 006890 74 ATQ---EL-TGEWKLMRMLEDPAVDVWMANNLPND-AAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNR 148 (627)
Q Consensus 74 A~~---~~-~~~~~~~~~~~~~~~~~~l~~~l~~~-~~vg~d~~~~s~~~~~~l~~~l~~~~~~l~~~~~~lid~lr~~k 148 (627)
.+. +. ...+.+....... + +.+.|+.. .++++.+...+...+..+ ....++++ .++|+++|.+|
T Consensus 92 ~~~~~~~~~~~~~~v~~~~~~~---~-~~~~L~~~~~~~~~~g~~~~~~~~~~~------~~~~~~~~-~~~l~~lR~iK 160 (517)
T 3l24_A 92 VPDEPNEYWADYFDIELLVKPD---Q-VEKLLPYDKARFAYIGEYLEVAQALGF------ELMNPEPV-MNFYHYHRAYK 160 (517)
T ss_dssp CCCCCCSGGGGGSEEEEESSGG---G-CGGGSCSCCTTEEEESSCHHHHHHHTC------CCBSCHHH-HHHHHHHHTSC
T ss_pred cccCchhhhhhccCeEEEcCHH---H-HHHHHhhccCceEEEcCCcCHHHhhhh------ccCCchhH-HHHHHHHHhcC
Confidence 111 10 0112333222111 1 23334332 346666544443222111 12355566 68899999999
Q ss_pred CCCC
Q 006890 149 PPVE 152 (627)
Q Consensus 149 ~~~e 152 (627)
++.|
T Consensus 161 s~~E 164 (517)
T 3l24_A 161 TQYE 164 (517)
T ss_dssp CHHH
T ss_pred CHHH
Confidence 9998
No 65
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=94.54 E-value=0.081 Score=55.04 Aligned_cols=89 Identities=12% Similarity=0.074 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC-Ccccccc----cccccCccccCCCcCCCCCCCCcc
Q 006890 450 HEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD-YRHGTGH----GVGSYLNVHEGPQSISFKPRNVPI 524 (627)
Q Consensus 450 e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~-~~h~~GH----gvG~~l~vhE~P~~~~~~~~~~~l 524 (627)
..|++-+.+.+++..+...++| |++-.+|+..+.+.+.+.|-. -..|.|+ +++.. -+|--|.. .+++.+|
T Consensus 47 ~~R~Aa~I~~~v~~~~~~~ikp-G~t~~el~~~~e~~i~~~~~~~~~~g~~FP~ciSvN~~-v~Hg~P~~---~~~~~~L 121 (358)
T 3fm3_A 47 DARRAAEAHRRARYRVQSIVRP-GITLLEIVRSIEDSTRTLLKGERNNGIGFPAGMSMNSC-AAHYTVNP---GEQDIVL 121 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHHTTTSGGGGEEEEEEEEETTE-EECCCCCT---TCCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-CCcHHHHHHHHHHHHHHhcCCCcccCCCCCcEEeeCCE-EEecCCCC---CCCCeEe
Confidence 4688888889999999999998 999999999999999887652 1112222 22211 12444532 1156789
Q ss_pred cCCcEEeeCceeeecCccE
Q 006890 525 HASMTATDEPGYYEDGNFG 543 (627)
Q Consensus 525 ~~Gmv~siEPg~y~~~~~G 543 (627)
++|.++.+.-|.+.+|..|
T Consensus 122 ~~GDiV~ID~G~~~dGY~s 140 (358)
T 3fm3_A 122 KEDDVLKIDFGTHSDGRIM 140 (358)
T ss_dssp CTTCEEEEEEEEEETTEEE
T ss_pred cCCCEEEEEeeEEECCEEE
Confidence 9999999999999877443
No 66
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=92.39 E-value=0.36 Score=49.70 Aligned_cols=93 Identities=13% Similarity=0.087 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC--------CcccccccccccCccccCCCcCCCCCCC
Q 006890 450 HEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD--------YRHGTGHGVGSYLNVHEGPQSISFKPRN 521 (627)
Q Consensus 450 e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~--------~~h~~GHgvG~~l~vhE~P~~~~~~~~~ 521 (627)
.+|++-..+.+++..+.+.++| |++-.+|+.++.+.+.++|.. |+..++-|... -.|.. .+++
T Consensus 71 ~mR~A~~i~~~a~~~~~~~ikp-G~te~el~~~~~~~~~~~g~~~~~~~~~~fp~iv~~g~n~-----~~~H~---~~~~ 141 (337)
T 4fuk_A 71 RIKTVCQLSREVLDIATAAAKP-GITTDELDRIVHEATVERNMYPSPLNYYGFPKSVCTSVNE-----VICHG---IPDS 141 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETT-----EEECC---CCCS
T ss_pred HHHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHcCCCccCCCCCCcCceeeccccc-----cccCC---CCCC
Confidence 3677788888899999999997 999999999999999998862 11111111110 01221 1267
Q ss_pred CcccCCcEEeeCceeeecCccEEEEeEeeEE
Q 006890 522 VPIHASMTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 522 ~~l~~Gmv~siEPg~y~~~~~GvriEd~v~V 552 (627)
.+|++|.++.+.-|.+..| |-.=+.-|+.|
T Consensus 142 ~~l~~GD~v~iD~g~~~~G-Y~sD~tRT~~v 171 (337)
T 4fuk_A 142 RELEEGDILNIDVSSYLNG-FHGDLNETVFI 171 (337)
T ss_dssp CBCCTTCEEEEEEEEEETT-EEEEEEEEEES
T ss_pred ccccCCCEEEEecceeECC-EEEeeeeeEEe
Confidence 8899999999999998765 33344555554
No 67
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=91.21 E-value=0.87 Score=44.89 Aligned_cols=95 Identities=13% Similarity=-0.025 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCCCc----ccccccccccCcccc-CCCcCCCCCCCCccc
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLDYR----HGTGHGVGSYLNVHE-GPQSISFKPRNVPIH 525 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~~~----h~~GHgvG~~l~vhE-~P~~~~~~~~~~~l~ 525 (627)
.|++-..+.+++.++.+.++| |++-.+|++.++..+.+.|-... .+....+. ...+. .|. ..+++.+|+
T Consensus 13 mr~A~~i~~~a~~~~~~~ikp-G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~--~g~~~~~~H---~~~~~~~l~ 86 (264)
T 3tb5_A 13 MDESGELLADVHRHLRTFIKP-GITSWDIEVFVRDFIESHGGVAAQIGYEGYKYATC--CSINDEICH---GFPRKKVLK 86 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCCSEE--EEETTEEEC---CCCCSCBCC
T ss_pred HHHHHHHHHHHHHHHHHhCcC-CCCHHHHHHHHHHHHHHcCCCcccccccCCCcceE--ECCcccccC---CCCCCcccc
Confidence 456666777888899999997 99999999999999999885210 11111111 11111 111 122678999
Q ss_pred CCcEEeeCceeeecCccEEEEeEeeEE
Q 006890 526 ASMTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 526 ~Gmv~siEPg~y~~~~~GvriEd~v~V 552 (627)
+|.++.+.-|....| |-.=+.-|+.|
T Consensus 87 ~Gdlv~iD~g~~~~G-Y~sD~tRT~~v 112 (264)
T 3tb5_A 87 DGDLIKVDMCVDLKG-AISDSCWSYVV 112 (264)
T ss_dssp TTCEEEEEEEEEETT-EEEEEEEEEEC
T ss_pred CCCEEEEeccceecc-eeeeccccccc
Confidence 999999999987654 44556666666
No 68
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=88.64 E-value=2.3 Score=43.42 Aligned_cols=95 Identities=13% Similarity=0.079 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCCC---c-ccccccccccCcccc-CCCcCCCCCCCCccc
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLDY---R-HGTGHGVGSYLNVHE-GPQSISFKPRNVPIH 525 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~~---~-h~~GHgvG~~l~vhE-~P~~~~~~~~~~~l~ 525 (627)
.|++...+.+++.++.+.++| |++-.+|++.+.+.+.+.|..- . ++..-.|. ..+++ -|. +.+++.+|+
T Consensus 84 mR~A~~ia~~al~~~~~~i~p-Gvte~el~~~~~~~~~~~G~~~~~~~y~~fp~iv~--sg~n~~~~H---~~p~~~~L~ 157 (329)
T 2b3h_A 84 MRLVCRLAREVLDVAAGMIKP-GVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCC--TSVNEVICH---GIPDRRPLQ 157 (329)
T ss_dssp HHHHHHHHHHHHHHHHHTCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSE--EEETTEEEC---CCCCSCBCC
T ss_pred HHHHHHHHHHHHHHHHHHhhC-CCcHHHHHHHHHHHHHHcCCccccccccCCCCeEE--ecCCCCcCC---CCCCCcCCC
Confidence 345556666778888889997 9999999999999999988521 0 01111111 11111 111 112567899
Q ss_pred CCcEEeeCceeeecCccEEEEeEeeEE
Q 006890 526 ASMTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 526 ~Gmv~siEPg~y~~~~~GvriEd~v~V 552 (627)
+|.++.+.-|.+..| |-.=+.-|+.|
T Consensus 158 ~GDiv~iD~G~~~~G-Y~sD~tRT~~v 183 (329)
T 2b3h_A 158 EGDIVNVDITLYRNG-YHGDLNETFFV 183 (329)
T ss_dssp TTCEEEEEEEEEETT-EEEEEEEEEEC
T ss_pred CCCEEEEEeeEEECC-EEEeeEEEEEe
Confidence 999999999987754 44456666666
No 69
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=88.18 E-value=1.2 Score=44.80 Aligned_cols=95 Identities=13% Similarity=0.003 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC--CcccccccccccCccccCCCcCCCCCCCCcccCC
Q 006890 450 HEKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD--YRHGTGHGVGSYLNVHEGPQSISFKPRNVPIHAS 527 (627)
Q Consensus 450 e~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~--~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~l~~G 527 (627)
..|++-..+.+++..+.+.++| |++-.+|+..+.+.+.+.|.. |+..+ +++.. .+|-.|.. . ++.+|++|
T Consensus 5 ~mr~A~~i~~~~l~~~~~~i~p-G~te~el~~~~~~~~~~~G~~~~fp~~v--s~n~~-~~H~~p~~---~-~~~~L~~G 76 (295)
T 1xgs_A 5 KLMKAGEIAKKVREKAIKLARP-GMLLLELAESIEKMIMELGGKPAFPVNL--SINEI-AAHYTPYK---G-DTTVLKEG 76 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCEESSCCEE--EETTE-EECCCCCT---T-CCCBCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHcCCCCCCCcEE--eeCCc-cccccCCC---C-CCccccCC
Confidence 4677888888899999999997 999999999999999998863 33222 23311 12333321 0 35789999
Q ss_pred cEEeeCceeeecCccEEEEeEeeEEe
Q 006890 528 MTATDEPGYYEDGNFGIRLENVLVVT 553 (627)
Q Consensus 528 mv~siEPg~y~~~~~GvriEd~v~V~ 553 (627)
.++.+.-|....| |-.=+.-|+.|.
T Consensus 77 Div~iD~G~~~~G-Y~sD~tRT~~vG 101 (295)
T 1xgs_A 77 DYLKIDVGVHIDG-FIADTAVTVRVG 101 (295)
T ss_dssp CEEEEEEEEEETT-EEEEEEEEEETT
T ss_pred CEEEEEEeEEECC-EEEEEEEEEEeC
Confidence 9999999987654 334455566653
No 70
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}
Probab=87.76 E-value=2.5 Score=43.78 Aligned_cols=96 Identities=14% Similarity=0.002 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCCCc----ccccccccccCcccc-CCCcCCCCCCCCccc
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLDYR----HGTGHGVGSYLNVHE-GPQSISFKPRNVPIH 525 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~~~----h~~GHgvG~~l~vhE-~P~~~~~~~~~~~l~ 525 (627)
.|++...+.+++.++.+.++| |++-.+|++.+.+.+.+.|..-. ++..-.|+ ..+++ -|. ..+++.+|+
T Consensus 112 mR~A~~ia~~al~~~~~~ikp-GvTE~El~~~~~~~~~~~Ga~ps~l~y~~Fp~iv~--sg~N~~i~H---~~p~~r~L~ 185 (368)
T 3s6b_A 112 IREACILGRKTLDYAHTLVSP-GVTTDEIDRKVHEFIIKNNAYPSTLNYYKFPKSCC--TSVNEIVCH---GIPDYRPLK 185 (368)
T ss_dssp HHHHHHHHHHHHHHHHHTCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSEE--EEETTEEEC---CCCCSCBCC
T ss_pred HHHHHHHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHcCCccccccccCCCCeEE--EcCcccccc---CCCCCcccc
Confidence 355566666777888889997 99999999999999999886210 01111121 11221 111 122567899
Q ss_pred CCcEEeeCceeeecCccEEEEeEeeEEe
Q 006890 526 ASMTATDEPGYYEDGNFGIRLENVLVVT 553 (627)
Q Consensus 526 ~Gmv~siEPg~y~~~~~GvriEd~v~V~ 553 (627)
+|.++.+.-|.+..| |-.=+.-|++|.
T Consensus 186 ~GDiV~iD~G~~~~G-Y~sDitRT~~vG 212 (368)
T 3s6b_A 186 SGDIINIDISVFYKG-VHSDLNETYFVG 212 (368)
T ss_dssp TTCEEEEEEEEEETT-EEEEEEEEEECS
T ss_pred CCCEEEEEEeEEECc-EEEEEEEEEEEC
Confidence 999999999988754 445567777774
No 71
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=87.24 E-value=3.4 Score=40.52 Aligned_cols=96 Identities=11% Similarity=0.024 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCCCc-cc-cccc--ccccCccccCCCcCCCCCCCCcccC
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLDYR-HG-TGHG--VGSYLNVHEGPQSISFKPRNVPIHA 526 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~~~-h~-~GHg--vG~~l~vhE~P~~~~~~~~~~~l~~ 526 (627)
.|++...+.+++.++.+.++| |++-.+|.+.+...+.+.|..-. .+ .|+. +. ...+. ......+++.+|++
T Consensus 17 ~r~A~~i~~~~~~~~~~~i~p-G~tE~el~~~~~~~~~~~G~~~~~~~~~~f~~iv~--~g~n~--~~~H~~p~~~~l~~ 91 (262)
T 3mx6_A 17 MRAAGKLAAETLDFITDHVKP-NVTTNSLNDLCHNFITSHNAIPAPLNYKGFPKSIC--TSINH--VVCHGIPNDKPLKN 91 (262)
T ss_dssp HHHHHHHHHHHHHHHGGGCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSE--EEETT--EEECCCCCSCBCCT
T ss_pred HHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHcCCcccccccCCCCcceE--ecccc--cccCCCCCCcccCC
Confidence 455666667778888889997 99999999999999998876210 00 1111 11 11111 11112225678999
Q ss_pred CcEEeeCceeeecCccEEEEeEeeEE
Q 006890 527 SMTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 527 Gmv~siEPg~y~~~~~GvriEd~v~V 552 (627)
|.++.+.-|....| |-.-+..|+.|
T Consensus 92 Gd~v~iD~G~~~~G-Y~sD~tRT~~v 116 (262)
T 3mx6_A 92 GDIVNIDVTVILDG-WYGDTSRMYYV 116 (262)
T ss_dssp TCEEEEEEEEEETT-EEEEEEEEEEC
T ss_pred CCEEEEEeeEEECC-EEEEEEEEEEc
Confidence 99999998886544 44556666666
No 72
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=86.78 E-value=3.6 Score=40.93 Aligned_cols=96 Identities=17% Similarity=0.067 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCCC--cccccc--cccccCccccCCCcCCCCCCCCcccC
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLDY--RHGTGH--GVGSYLNVHEGPQSISFKPRNVPIHA 526 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~~--~h~~GH--gvG~~l~vhE~P~~~~~~~~~~~l~~ 526 (627)
.|++...+.+++.++.+.++| |++-.+|...+...+.+.|..- ....|+ .|+ ...+. ......+++.+|++
T Consensus 50 ~r~A~~i~~~a~~~~~~~i~p-G~tE~el~~~~~~~~~~~G~~~~~~~~~~f~~iv~--~g~n~--~~~H~~p~~~~l~~ 124 (285)
T 3pka_A 50 MRVAGRIAAGALAEAGKAVAP-GVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCC--TSLNE--VICHGIPDSTVITD 124 (285)
T ss_dssp HHHHHHHHHHHHHHHHHTCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSE--EEETT--EEECCCCCSCBCCT
T ss_pred HHHHHHHHHHHHHHHHHhcCC-CCcHHHHHHHHHHHHHHcCCccccccccCCCCceE--ecccc--eeecCCCCCcccCC
Confidence 355555666677788889997 9999999999999999988621 000111 121 11111 01111225678999
Q ss_pred CcEEeeCceeeecCccEEEEeEeeEE
Q 006890 527 SMTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 527 Gmv~siEPg~y~~~~~GvriEd~v~V 552 (627)
|.++.+.-|....| |-.-+..|+.|
T Consensus 125 Gd~v~iD~G~~~~G-Y~sD~tRT~~v 149 (285)
T 3pka_A 125 GDIVNIDVTAYIGG-VHGDTNATFPA 149 (285)
T ss_dssp TCEEEEEEEEEETT-EEEEEEEEEEC
T ss_pred CCEEEEEEEEEECC-EEEEEEEEEEc
Confidence 99999998886543 44556666666
No 73
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=84.71 E-value=4.5 Score=39.26 Aligned_cols=92 Identities=20% Similarity=0.118 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC--------CcccccccccccCccccCCCcCCCCCCCC
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD--------YRHGTGHGVGSYLNVHEGPQSISFKPRNV 522 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~--------~~h~~GHgvG~~l~vhE~P~~~~~~~~~~ 522 (627)
.|++-..+.+++..+.+.++| |++-.+|+..+...+.+.|.. |+..+.=|.-. ...| +.|++.
T Consensus 12 ~r~A~~i~~~~~~~~~~~i~~-G~te~el~~~~~~~~~~~g~~~~~~~~~~f~~~v~~g~n~-~~~H-------~~p~~~ 82 (252)
T 1qxy_A 12 LKEIGYICAKVRNTMQAATKP-GITTKELDNIAKELFEEYGAISAPIHDENFPGQTCISVNE-EVAH-------GIPSKR 82 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHHTCEEHHHHHHCCSSSSEEEETT-EEEC-------CCCCSC
T ss_pred HHHHHHHHHHHHHHHHHHCCC-CCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEEcCCc-cccC-------CCCCCc
Confidence 455566666777888888997 999999999999999888762 22111111110 0112 122567
Q ss_pred cccCCcEEeeCceeeecCccEEEEeEeeEE
Q 006890 523 PIHASMTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 523 ~l~~Gmv~siEPg~y~~~~~GvriEd~v~V 552 (627)
+|++|.++.+.-|....| |-.-+..|+.|
T Consensus 83 ~l~~gd~v~iD~g~~~~g-y~sD~tRT~~v 111 (252)
T 1qxy_A 83 VIREGDLVNIDVSALKNG-YYADTGISFVV 111 (252)
T ss_dssp BCCTTCEEEEEEEEEETT-EEEEEEEEEEC
T ss_pred CcCCCCEEEEEeeEEECC-EEEEEEEEEEc
Confidence 899999999999987654 55556777777
No 74
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=84.45 E-value=3.6 Score=42.54 Aligned_cols=94 Identities=14% Similarity=0.096 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCCCc-ccccc--cccccCc---cccCCCcCCCCCC-CCc
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLDYR-HGTGH--GVGSYLN---VHEGPQSISFKPR-NVP 523 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~~~-h~~GH--gvG~~l~---vhE~P~~~~~~~~-~~~ 523 (627)
.|++-..+.+++.++.+.++| |++-.+|++.+...+.+.|-.-. .+.++ .+| .+ .|-.|.. + + +.+
T Consensus 50 mR~A~~I~~~a~~~~~~~ikp-G~te~El~~~ie~~~~~~g~~~~~~~~aFpt~~s--~N~~~~H~~P~~---~-d~~~~ 122 (360)
T 2nw5_A 50 ARRAAEAHRRARYRVQSIVRP-GITLLEIVRSIEDSTRTLLKGERNNGIGFPAGMS--MNSCAAHYTVNP---G-EQDIV 122 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHHTTTSGGGGEEEEEEEE--ETTEEECCCCCT---T-CCCCB
T ss_pred HHHHHHHHHHHHHHHHHhccC-CCCHHHHHHHHHHHHHHhcCCCccCccccCceee--ccccccCCCCCc---c-cCCcC
Confidence 455666667778888889997 99999999999988888763210 00111 123 22 2322321 0 2 678
Q ss_pred ccCCcEEeeCceeeecCccEEEEeEeeEE
Q 006890 524 IHASMTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 524 l~~Gmv~siEPg~y~~~~~GvriEd~v~V 552 (627)
|++|.++.+.-|....| |-.=+..|+.|
T Consensus 123 L~~GDlV~ID~G~~~~G-Y~sD~tRT~~v 150 (360)
T 2nw5_A 123 LKEDDVLKIDFGTHSDG-RIMDSAFTVAF 150 (360)
T ss_dssp CCTTCEEEEEEEEEETT-EEEEEEEEEEC
T ss_pred cCCCCEEEEEEEEEECC-EEEEEEEEEEc
Confidence 99999999999987654 44445566665
No 75
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=83.99 E-value=5.1 Score=39.19 Aligned_cols=95 Identities=15% Similarity=0.088 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHH-HHHcCCCCc----ccccccccccCcccc-CCCcCCCCCCC-Cc
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLP-LWKYGLDYR----HGTGHGVGSYLNVHE-GPQSISFKPRN-VP 523 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~-l~~~G~~~~----h~~GHgvG~~l~vhE-~P~~~~~~~~~-~~ 523 (627)
.|++-..+.+++..+.+.++| |++-.+|...+... +.+.|.... .+...-|. ...+. -|. +.|++ .+
T Consensus 13 ~r~A~~i~~~~~~~~~~~i~~-G~te~el~~~~~~~~~~~~g~~~~~~~~~~f~~iv~--~g~n~~~~H---~~p~~~~~ 86 (263)
T 2gg2_A 13 MRVAGRLAAEVLEMIEPYVKP-GVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVC--ISINEVVCH---GIPDDAKL 86 (263)
T ss_dssp HHHHHHHHHHHHHHHGGGCST-TCBHHHHHHHHHHHHHHTSCCEESSTTGGGCCSSSE--EEETTEEEC---CCCCTTCB
T ss_pred HHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHHhCCccccccccCCCcceE--ecccccccC---CCCCCCcC
Confidence 455556666777788888997 99999999999998 888775211 01111111 11111 111 11234 78
Q ss_pred ccCCcEEeeCceeeecCccEEEEeEeeEE
Q 006890 524 IHASMTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 524 l~~Gmv~siEPg~y~~~~~GvriEd~v~V 552 (627)
|++|.++.+.-|....| |-.-+..|+.|
T Consensus 87 l~~gd~v~iD~G~~~~g-y~sD~tRT~~v 114 (263)
T 2gg2_A 87 LKDGDIVNIDVTVIKDG-FHGDTSKMFIV 114 (263)
T ss_dssp CCTTCEEEEEEEEEETT-EEEEEEEEEEC
T ss_pred cCCCCEEEEEEEEEECC-EEEEEEEEEEc
Confidence 99999999999987643 55556677776
No 76
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=82.65 E-value=6.9 Score=38.25 Aligned_cols=95 Identities=15% Similarity=0.109 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC--Cc--ccccccccccCcccc-CCCcCCCCCCCCc-c
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD--YR--HGTGHGVGSYLNVHE-GPQSISFKPRNVP-I 524 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~--~~--h~~GHgvG~~l~vhE-~P~~~~~~~~~~~-l 524 (627)
.|++-..+.+++..+.+.++| |++-.+|+..+...+.+.|.. |. .+...-|. ...++ -|. +.|++.+ |
T Consensus 25 ~r~A~~i~~~~~~~~~~~i~p-G~te~el~~~~~~~~~~~G~~~~~~~~~~f~~~v~--~g~n~~~~H---~~p~~~~~l 98 (262)
T 1o0x_A 25 MKKAGKAVAVALREVRKVIVP-GKTAWDVETLVLEIFKKLRVKPAFKGYGGYKYATC--VSVNEEVVH---GLPLKEKVF 98 (262)
T ss_dssp HHHHHHHHHHHHHHGGGGCST-TCBHHHHHHHHHHHHHHHTCEESSTTGGGCCCSEE--EEETTBCSC---CCCCTTCBC
T ss_pred HHHHHHHHHHHHHHHHHHCCC-CCcHHHHHHHHHHHHHHcCCccccccccCCCcceE--ecccccccC---CCCCCCccc
Confidence 344555556677778888887 999999999999999998862 21 11111121 11111 121 1225667 9
Q ss_pred cCCcEEeeCceeeecCccEEEEeEeeEE
Q 006890 525 HASMTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 525 ~~Gmv~siEPg~y~~~~~GvriEd~v~V 552 (627)
++|.++.+.-|....| |-.-+..|+.|
T Consensus 99 ~~Gd~v~iD~G~~~~G-Y~sD~tRT~~v 125 (262)
T 1o0x_A 99 KEGDIVSVDVGAVYQG-LYGDAAVTYIV 125 (262)
T ss_dssp CTTCEEEEEEEEEETT-EEEEEEEEEES
T ss_pred CCCCEEEEEEEEEECC-EEEEEEEEEEC
Confidence 9999999999887643 55556667766
No 77
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=82.53 E-value=7.5 Score=38.56 Aligned_cols=95 Identities=17% Similarity=0.110 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCCC--Cccccccc--ccccCcccc-CCCcCCCCCC-CCcc
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGLD--YRHGTGHG--VGSYLNVHE-GPQSISFKPR-NVPI 524 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~~--~~h~~GHg--vG~~l~vhE-~P~~~~~~~~-~~~l 524 (627)
.|++...+.+++.++.+.++| |++-.+|.......+.+.|.. |....++. |+ ...+. .|.. .++ +.+|
T Consensus 43 ~r~A~~i~~~a~~~~~~~i~~-G~tE~el~~~~~~~~~~~G~~~~~~~~~~f~~iv~--~g~n~~~~H~---~p~~~~~l 116 (286)
T 3tav_A 43 MAAAGSIVGAALVAVRDAAKA-GVSTLELDQVAESVIREAGAVPSFLGYHGFPASIC--SSVNDQVVHG---IPSATAVL 116 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSEE--EEETTBCSCC---CCCTTCBC
T ss_pred HHHHHHHHHHHHHHHHHhccC-CCcHHHHHHHHHHHHHHcCCcccccccCCCCCceE--EecCccccCC---CCCCCccc
Confidence 455666666777888889997 999999999999999998862 11001111 11 11111 1221 224 6889
Q ss_pred cCCcEEeeCceeeecCccEEEEeEeeEE
Q 006890 525 HASMTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 525 ~~Gmv~siEPg~y~~~~~GvriEd~v~V 552 (627)
++|.++.+.-|....| |-.-+.-|+.|
T Consensus 117 ~~Gd~v~iD~G~~~~G-Y~sD~tRT~~v 143 (286)
T 3tav_A 117 ADGDLVSIDCGAILDG-WHGDSAWTFAV 143 (286)
T ss_dssp CTTCEEEEEEEEEETT-EEEEEEEEEES
T ss_pred CCCCEEEEEEEEEECC-EEEeeEEEEEC
Confidence 9999999998886543 44556666666
No 78
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=82.39 E-value=1.5 Score=46.09 Aligned_cols=99 Identities=13% Similarity=0.022 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHcCC-CCc------ccccccccccCcccc-CCCcCC-CCCCC
Q 006890 451 EKACYTAVLKGHIALGNAVFPNGTCGHTLDILARLPLWKYGL-DYR------HGTGHGVGSYLNVHE-GPQSIS-FKPRN 521 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~~p~G~~~~~l~~~a~~~l~~~G~-~~~------h~~GHgvG~~l~vhE-~P~~~~-~~~~~ 521 (627)
.|++-..+.+++..+...++| |++-.+|+..+.+.+.+.|- .|. .+..+.+. ..+.+ -|..+. .+.++
T Consensus 28 mR~A~~i~~~~l~~~~~~ikp-Gvte~el~~~~~~~i~~~ga~~~~~~~~~~~g~~f~~~--vS~N~~v~H~~P~~~d~~ 104 (401)
T 2q8k_A 28 YKMGGDIANRVLRSLVEASSS-GVSVLSLCEKGDAMIMEETGKIFKKEKEMKKGIAFPTS--ISVNNCVCHFSPLKSDQD 104 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHCC--CCBHHHHHHHHHHHHHHHHHTSSTTCTTCCEEEEEEEE--EEETTEEECCCCCTTSCC
T ss_pred HHHHHHHHHHHHHHHHHhccC-CCcHHHHHHHHHHHHHHcCChhhcccccccCCCCCCcE--EeCCcccccCCCCCCCCC
Confidence 455556666777888888997 99999999999998888653 121 22222222 22221 111111 01024
Q ss_pred CcccCCcEEeeCceeeecCccEEEEeEeeEEe
Q 006890 522 VPIHASMTATDEPGYYEDGNFGIRLENVLVVT 553 (627)
Q Consensus 522 ~~l~~Gmv~siEPg~y~~~~~GvriEd~v~V~ 553 (627)
.+|++|.++.+.-|....| |-.=+..|++|.
T Consensus 105 ~~L~~GDiV~ID~G~~~~G-Y~sD~tRT~~vG 135 (401)
T 2q8k_A 105 YILKEGDLVKIDLGVHVDG-FIANVAHTFVVD 135 (401)
T ss_dssp CBCCTTCEEEEEEEEEETT-EEEEEEEEEETT
T ss_pred cccCCCCEEEEEEEEEECC-EEEEEEEEEEEC
Confidence 7899999999999987755 444566777775
No 79
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A*
Probab=74.34 E-value=4.1 Score=43.71 Aligned_cols=92 Identities=13% Similarity=0.097 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHHhccCCCCcccchH----HHHHHHHHHHcCCC----CcccccccccccCccccCCCcCCCCCCCCc
Q 006890 452 KACYTAVLKGHIALGNAVFPNGTCGHTL----DILARLPLWKYGLD----YRHGTGHGVGSYLNVHEGPQSISFKPRNVP 523 (627)
Q Consensus 452 ~~~y~~v~~~~~~~~~~~~p~G~~~~~l----~~~a~~~l~~~G~~----~~h~~GHgvG~~l~vhE~P~~~~~~~~~~~ 523 (627)
|++-..+.+++..+...++| |++-.+| +..+++.+.+.|.. |+..+ +++.. .+|-.|.. . ++.+
T Consensus 170 R~A~~Ia~~al~~~~~~ikp-GvTe~ELa~~le~~~~~~i~~~Ga~~g~~FP~iv--SvN~~-v~Hg~P~~---~-d~r~ 241 (478)
T 1b6a_A 170 REAAEAHRQVRKYVMSWIKP-GMTMIEICEKLEDCSRKLIKENGLNAGLAFPTGC--SLNNC-AAHYTPNA---G-DTTV 241 (478)
T ss_dssp HHHHHHHHHHHHHHHHHCCT-TSBHHHHHHHHHHHHHHHHTCBTTTEEEEEEEEE--EETTE-EECCCCCT---T-CCCB
T ss_pred HHHHHHHHHHHHHHhhhcCC-CCcHHHHHHHHHHHHHHHHHhcCCcccCCCCeEE--ECCCc-cccCCCCc---c-cCcc
Confidence 44455556667778888997 9999999 44444544455652 22111 12211 11222210 0 2478
Q ss_pred ccCCcEEeeCceeeecCccEEEEeEeeEE
Q 006890 524 IHASMTATDEPGYYEDGNFGIRLENVLVV 552 (627)
Q Consensus 524 l~~Gmv~siEPg~y~~~~~GvriEd~v~V 552 (627)
|++|.++.+.-|....| |-.=+.-|+.|
T Consensus 242 Lk~GDiV~ID~G~~~dG-Y~sD~tRT~~V 269 (478)
T 1b6a_A 242 LQYDDICKIDFGTHISG-RIIDCAFTVTF 269 (478)
T ss_dssp CCTTCCEEEEEEEEETT-EEEEEEEEECS
T ss_pred ccCCCeEEEEEEEEECC-EEEEEEEEEEe
Confidence 99999999999987654 32333444444
No 80
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae}
Probab=59.01 E-value=21 Score=39.03 Aligned_cols=101 Identities=8% Similarity=-0.024 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHHHHhcc---------CCCCcccchHHHHHHHHHHHcCC------CCcccccccccccCcc-----cc
Q 006890 451 EKACYTAVLKGHIALGNAV---------FPNGTCGHTLDILARLPLWKYGL------DYRHGTGHGVGSYLNV-----HE 510 (627)
Q Consensus 451 ~~~~y~~v~~~~~~~~~~~---------~p~G~~~~~l~~~a~~~l~~~G~------~~~h~~GHgvG~~l~v-----hE 510 (627)
.|.+-+.+.++...++..+ +| |++..+|.....+.+.+.+- ....|.+|-++ +++ |-
T Consensus 49 Yr~AgeIa~~vLk~v~~li~~G~~~~~~kp-ga~I~ELCe~GD~~I~e~~akvyk~K~~~KGIAFPT~--ISvN~~vaHy 125 (614)
T 4b6a_t 49 YRTAGQIAQTALKYVTSLINDSYHSKTTQR-QLTVPELCLLTDSFILTRLEQYYKNKVNERGIAIPTT--IDIDQISGGW 125 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCHHHHHHTTC-CCBTTHHHHHHHHHHHHHHHTSSTTCSCCEEEEEEEE--EEETTEEECC
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccccCC-CCcHHHHHHHHHHHHHHHHHhhhcCCcccCCCccCce--ecHHHcccCC
Confidence 3444444555555555544 54 67777887776666665321 23345556555 444 44
Q ss_pred CCCcCCC---------------CCCCCcccCCcEEeeCceeeecCccEEEEeEeeEEecC
Q 006890 511 GPQSISF---------------KPRNVPIHASMTATDEPGYYEDGNFGIRLENVLVVTDA 555 (627)
Q Consensus 511 ~P~~~~~---------------~~~~~~l~~Gmv~siEPg~y~~~~~GvriEd~v~V~~~ 555 (627)
.|..... ...+.+|++|.|+-|.-|++.+| |.+-...|++|.+.
T Consensus 126 sP~~~D~~~~~~~~~~~~~~~~~~~~~vLk~GDVVKIDLGvHIDG-yiadvA~Tvvvg~~ 184 (614)
T 4b6a_t 126 CPEIDDTQNLLNWNKGKDSTFASSVTGTLRPGDLVKITLGVHIDG-YTSEVSHTMVIYPV 184 (614)
T ss_dssp CCCTTS------------------CCCBCCTTCEEEEEEEEEETT-EEEEEEEEEECCCC
T ss_pred CCCCcchhhcccccccccccccccccccccCCCEEEEEeeEEECC-eEEEEEEEEEECCc
Confidence 5532110 00256899999999999999986 56778899999653
No 81
>4ard_A Capsid protein P27; viral protein, retrovirus, GAG; 7.00A {Mason-pfizer monkey virus}
Probab=34.21 E-value=9.1 Score=32.41 Aligned_cols=37 Identities=19% Similarity=0.460 Sum_probs=31.0
Q ss_pred eeeecccccccccccccccCCCH-HHHHHHHHHHHHHHHH
Q 006890 567 LSFEHITWAPYQIKMINLKSLTP-EEIDWLNAYHSKCRDI 605 (627)
Q Consensus 567 ~~fe~lT~~p~~~~~i~~~~l~~-~e~~~ln~y~~~~~~~ 605 (627)
+.++.|| |.|.+-|.+..|+. +.+.|+-.|++.|+..
T Consensus 30 la~~~Lt--P~DWkslar~~L~pgq~llW~se~~e~cr~q 67 (116)
T 4ard_A 30 VADNWLT--PTDWNTLVRAVLSGGDHLLWKSEFFENCRDT 67 (116)
T ss_pred HHHhccC--hHhHHHHHHHHcCchhHHHHHHHHHHHHHHH
Confidence 4567776 99999999999997 5689999999988764
No 82
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=20.45 E-value=49 Score=20.64 Aligned_cols=24 Identities=21% Similarity=0.141 Sum_probs=17.2
Q ss_pred eEEEEecCCCCHHHHHHHHHHHHH
Q 006890 438 ITRTFHFGKPSAHEKACYTAVLKG 461 (627)
Q Consensus 438 ~tRT~~~G~p~~e~~~~y~~v~~~ 461 (627)
.-||+++|-.++|.+++-+-+.++
T Consensus 4 qvrtiwvggtpeelkklkeeakka 27 (36)
T 2ki0_A 4 QVRTIWVGGTPEELKKLKEEAKKA 27 (36)
T ss_dssp SCCCCCBCCCHHHHHHHHHHHHHH
T ss_pred eeEEEEecCCHHHHHHHHHHHHhc
Confidence 358999997677777776655554
Done!