Query 006891
Match_columns 627
No_of_seqs 494 out of 4306
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 11:41:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006891.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006891hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3da1_A Glycerol-3-phosphate de 100.0 4.2E-75 1.4E-79 643.7 49.2 531 54-614 5-542 (561)
2 2rgh_A Alpha-glycerophosphate 100.0 5.3E-70 1.8E-74 604.1 57.8 534 53-619 18-568 (571)
3 2qcu_A Aerobic glycerol-3-phos 100.0 3.9E-64 1.4E-68 550.7 46.1 480 71-595 3-496 (501)
4 3dme_A Conserved exported prot 100.0 1.1E-34 3.7E-39 304.9 31.3 353 70-452 3-368 (369)
5 1y56_B Sarcosine oxidase; dehy 100.0 2.2E-32 7.4E-37 289.2 36.4 345 70-454 4-355 (382)
6 3nyc_A D-arginine dehydrogenas 100.0 9.6E-33 3.3E-37 291.6 29.6 338 69-454 7-358 (381)
7 2gag_B Heterotetrameric sarcos 100.0 8.6E-30 2.9E-34 271.4 37.5 342 69-454 19-375 (405)
8 2gf3_A MSOX, monomeric sarcosi 100.0 5E-30 1.7E-34 271.6 33.9 342 71-454 3-364 (389)
9 3axb_A Putative oxidoreductase 100.0 9.8E-31 3.4E-35 282.6 28.0 338 69-454 21-418 (448)
10 2oln_A NIKD protein; flavoprot 100.0 5.1E-29 1.7E-33 264.8 33.7 343 71-454 4-374 (397)
11 1ryi_A Glycine oxidase; flavop 100.0 1.3E-29 4.5E-34 267.8 27.6 335 69-454 15-362 (382)
12 3pvc_A TRNA 5-methylaminomethy 100.0 4.7E-29 1.6E-33 282.9 27.8 340 69-454 262-649 (689)
13 2uzz_A N-methyl-L-tryptophan o 100.0 2.1E-28 7.2E-33 257.6 28.8 336 71-454 2-357 (372)
14 3ps9_A TRNA 5-methylaminomethy 100.0 1.3E-28 4.3E-33 279.1 28.2 333 70-453 271-644 (676)
15 1pj5_A N,N-dimethylglycine oxi 100.0 6.2E-28 2.1E-32 279.4 34.2 339 71-454 4-379 (830)
16 3dje_A Fructosyl amine: oxygen 100.0 3.4E-27 1.2E-31 254.1 30.2 338 69-454 4-384 (438)
17 3c4n_A Uncharacterized protein 100.0 6.3E-28 2.1E-32 256.9 23.1 323 69-454 34-397 (405)
18 3g3e_A D-amino-acid oxidase; F 100.0 1.6E-28 5.3E-33 256.6 16.9 313 73-455 2-334 (351)
19 1c0p_A D-amino acid oxidase; a 100.0 4.1E-27 1.4E-31 247.0 21.9 316 70-454 5-357 (363)
20 3cgv_A Geranylgeranyl reductas 99.7 8.4E-16 2.9E-20 162.5 18.3 212 227-454 97-314 (397)
21 4at0_A 3-ketosteroid-delta4-5a 99.6 4.7E-15 1.6E-19 162.1 18.6 202 69-297 39-265 (510)
22 1qo8_A Flavocytochrome C3 fuma 99.6 3E-14 1E-18 157.7 22.6 197 68-298 118-314 (566)
23 3oz2_A Digeranylgeranylglycero 99.6 2E-14 6.9E-19 151.5 20.2 165 228-405 98-268 (397)
24 3nix_A Flavoprotein/dehydrogen 99.6 4.4E-15 1.5E-19 158.4 14.1 76 227-307 101-176 (421)
25 1y0p_A Fumarate reductase flav 99.6 4.3E-14 1.5E-18 156.7 21.6 194 69-297 124-318 (571)
26 2bs2_A Quinol-fumarate reducta 99.5 6.3E-14 2.2E-18 156.5 17.3 201 69-298 3-222 (660)
27 2wdq_A Succinate dehydrogenase 99.5 6.7E-14 2.3E-18 155.0 16.1 203 69-299 5-209 (588)
28 3e1t_A Halogenase; flavoprotei 99.5 1.7E-13 5.7E-18 149.9 16.9 74 228-305 107-180 (512)
29 2h88_A Succinate dehydrogenase 99.5 2.1E-13 7.1E-18 151.3 15.6 196 70-298 17-219 (621)
30 3atr_A Conserved archaeal prot 99.5 3.1E-12 1.1E-16 137.7 24.2 77 227-306 95-171 (453)
31 2weu_A Tryptophan 5-halogenase 99.5 6.4E-13 2.2E-17 145.4 18.1 199 227-450 168-371 (511)
32 1d4d_A Flavocytochrome C fumar 99.5 1.2E-12 4.1E-17 144.8 20.3 195 69-298 124-319 (572)
33 3i3l_A Alkylhalidase CMLS; fla 99.5 1.3E-13 4.4E-18 152.5 12.2 75 227-306 123-197 (591)
34 3fmw_A Oxygenase; mithramycin, 99.5 2E-12 6.8E-17 142.7 20.9 74 228-307 144-217 (570)
35 3ihg_A RDME; flavoenzyme, anth 99.5 5.6E-12 1.9E-16 138.7 24.6 76 227-306 115-192 (535)
36 1chu_A Protein (L-aspartate ox 99.5 4.7E-13 1.6E-17 146.8 15.3 193 69-298 6-210 (540)
37 2qa2_A CABE, polyketide oxygen 99.4 1.2E-11 4E-16 134.5 23.2 74 228-307 103-176 (499)
38 2qa1_A PGAE, polyketide oxygen 99.4 1.1E-11 3.8E-16 134.7 21.8 74 228-307 102-175 (500)
39 1kf6_A Fumarate reductase flav 99.4 1.7E-12 5.9E-17 144.0 14.6 193 69-299 3-200 (602)
40 2gmh_A Electron transfer flavo 99.4 5.6E-12 1.9E-16 139.7 18.4 69 228-297 140-218 (584)
41 3gyx_A Adenylylsulfate reducta 99.4 1.6E-12 5.3E-17 145.2 13.6 68 230-298 164-235 (662)
42 3ka7_A Oxidoreductase; structu 99.4 3.5E-11 1.2E-15 128.2 23.3 59 231-297 195-253 (425)
43 2i0z_A NAD(FAD)-utilizing dehy 99.4 5.2E-12 1.8E-16 135.6 15.8 70 230-306 132-211 (447)
44 1jnr_A Adenylylsulfate reducta 99.3 1.5E-11 5.2E-16 137.6 17.3 190 70-298 21-220 (643)
45 3rp8_A Flavoprotein monooxygen 99.3 2.8E-11 9.6E-16 128.3 17.8 68 228-306 123-191 (407)
46 2aqj_A Tryptophan halogenase, 99.3 5.5E-11 1.9E-15 130.8 20.6 73 226-305 159-231 (538)
47 3v76_A Flavoprotein; structura 99.3 1.5E-11 5.1E-16 130.3 14.9 69 229-306 129-207 (417)
48 4dgk_A Phytoene dehydrogenase; 99.3 4E-11 1.4E-15 130.7 16.0 58 232-296 221-278 (501)
49 2e5v_A L-aspartate oxidase; ar 99.3 7.9E-11 2.7E-15 127.1 17.9 177 73-298 1-178 (472)
50 2e4g_A Tryptophan halogenase; 99.2 6E-10 2E-14 122.7 23.5 72 227-305 189-261 (550)
51 1rp0_A ARA6, thiazole biosynth 99.2 1.7E-10 5.7E-15 116.0 17.0 84 230-317 117-216 (284)
52 3nlc_A Uncharacterized protein 99.2 1.2E-10 4E-15 126.9 16.3 65 227-298 215-279 (549)
53 2gqf_A Hypothetical protein HI 99.2 7.2E-11 2.5E-15 124.5 13.8 68 230-306 107-188 (401)
54 2gag_A Heterotetrameric sarcos 99.2 8.4E-10 2.9E-14 128.9 22.5 60 534-596 482-541 (965)
55 2dkh_A 3-hydroxybenzoate hydro 99.2 1.5E-10 5.2E-15 129.7 14.3 77 228-306 137-220 (639)
56 1y56_A Hypothetical protein PH 99.2 5.4E-10 1.8E-14 121.3 17.9 62 534-599 412-473 (493)
57 2pyx_A Tryptophan halogenase; 99.2 2.9E-10 9.9E-15 124.6 15.6 73 227-306 170-243 (526)
58 2x3n_A Probable FAD-dependent 99.1 1.2E-10 4E-15 123.2 10.8 71 228-306 103-175 (399)
59 3qvp_A Glucose oxidase; oxidor 99.1 3.5E-10 1.2E-14 124.2 14.4 62 243-306 238-304 (583)
60 3p1w_A Rabgdi protein; GDI RAB 99.1 1E-09 3.5E-14 117.0 17.1 58 232-295 256-313 (475)
61 3alj_A 2-methyl-3-hydroxypyrid 99.1 2.1E-09 7.2E-14 112.6 18.1 67 227-305 102-168 (379)
62 3nrn_A Uncharacterized protein 99.1 3.5E-10 1.2E-14 120.4 11.7 56 231-296 188-243 (421)
63 3jsk_A Cypbp37 protein; octame 99.1 1.8E-09 6.2E-14 109.8 15.7 67 231-297 159-252 (344)
64 1k0i_A P-hydroxybenzoate hydro 99.1 3.7E-10 1.3E-14 119.1 11.0 71 230-305 101-171 (394)
65 3i6d_A Protoporphyrinogen oxid 99.1 1.7E-08 5.9E-13 108.7 24.2 38 70-107 4-48 (470)
66 2zxi_A TRNA uridine 5-carboxym 99.0 5.3E-10 1.8E-14 122.3 11.3 61 228-296 119-180 (637)
67 1pn0_A Phenol 2-monooxygenase; 99.0 1.1E-09 3.6E-14 123.1 13.7 77 228-306 115-239 (665)
68 2r0c_A REBC; flavin adenine di 99.0 1E-09 3.6E-14 120.7 13.2 72 229-307 135-206 (549)
69 3ces_A MNMG, tRNA uridine 5-ca 99.0 5.8E-10 2E-14 122.5 10.9 62 227-296 119-181 (651)
70 3c96_A Flavin-containing monoo 99.0 5.4E-09 1.9E-13 110.7 17.7 74 228-306 103-178 (410)
71 1yvv_A Amine oxidase, flavin-c 99.0 2.1E-08 7.1E-13 102.9 21.6 37 71-107 2-38 (336)
72 2vou_A 2,6-dihydroxypyridine h 99.0 1.1E-08 3.6E-13 108.0 19.1 63 231-304 98-160 (397)
73 2gjc_A Thiazole biosynthetic e 99.0 7.9E-09 2.7E-13 104.5 16.8 40 69-108 63-104 (326)
74 2cul_A Glucose-inhibited divis 99.0 5.2E-09 1.8E-13 101.6 14.3 62 230-299 66-128 (232)
75 3cp8_A TRNA uridine 5-carboxym 99.0 1.2E-09 4.2E-14 119.8 10.7 62 228-297 113-175 (641)
76 3q9t_A Choline dehydrogenase a 99.0 4.6E-10 1.6E-14 123.4 6.9 61 243-305 217-280 (577)
77 2jbv_A Choline oxidase; alcoho 98.9 3.8E-09 1.3E-13 115.9 13.4 68 236-304 212-282 (546)
78 4a9w_A Monooxygenase; baeyer-v 98.9 4.3E-09 1.5E-13 108.8 12.1 59 231-297 75-133 (357)
79 2bcg_G Secretory pathway GDP d 98.9 1.6E-08 5.4E-13 108.5 16.7 61 232-299 242-303 (453)
80 2bry_A NEDD9 interacting prote 98.9 4.6E-09 1.6E-13 114.0 11.1 66 230-296 164-230 (497)
81 3lov_A Protoporphyrinogen oxid 98.9 5.8E-08 2E-12 104.8 18.6 208 233-455 237-465 (475)
82 4gde_A UDP-galactopyranose mut 98.8 2.3E-08 7.7E-13 109.1 15.0 60 232-303 222-281 (513)
83 3k7m_X 6-hydroxy-L-nicotine ox 98.8 1.4E-08 4.9E-13 108.1 13.1 39 72-110 2-41 (431)
84 1n4w_A CHOD, cholesterol oxida 98.8 1.8E-08 6E-13 109.6 13.6 67 237-304 226-297 (504)
85 3fim_B ARYL-alcohol oxidase; A 98.8 5.4E-09 1.8E-13 114.6 9.2 62 243-306 219-287 (566)
86 3pl8_A Pyranose 2-oxidase; sub 98.8 2.7E-08 9.2E-13 110.7 14.2 62 245-306 273-335 (623)
87 1kdg_A CDH, cellobiose dehydro 98.8 5.1E-08 1.8E-12 107.2 15.9 69 236-306 199-272 (546)
88 4fk1_A Putative thioredoxin re 98.8 3.1E-08 1.1E-12 100.3 13.1 37 69-105 4-40 (304)
89 2ywl_A Thioredoxin reductase r 98.8 9.3E-08 3.2E-12 88.7 15.1 65 231-306 55-119 (180)
90 3t37_A Probable dehydrogenase; 98.8 1.3E-08 4.6E-13 111.4 10.1 57 244-304 223-280 (526)
91 2xdo_A TETX2 protein; tetracyc 98.8 3E-08 1E-12 104.5 11.9 65 229-304 125-189 (398)
92 1ju2_A HydroxynitrIle lyase; f 98.8 1E-08 3.4E-13 112.3 8.4 66 238-305 200-271 (536)
93 1d5t_A Guanine nucleotide diss 98.8 1.6E-07 5.6E-12 100.0 17.6 61 231-299 233-293 (433)
94 3d1c_A Flavin-containing putat 98.7 6.1E-08 2.1E-12 100.8 13.5 59 229-296 85-143 (369)
95 3qj4_A Renalase; FAD/NAD(P)-bi 98.7 3.9E-08 1.3E-12 101.4 11.4 35 72-106 2-39 (342)
96 4ap3_A Steroid monooxygenase; 98.7 7.8E-08 2.7E-12 105.4 14.1 61 230-296 97-159 (549)
97 2xve_A Flavin-containing monoo 98.7 5.7E-08 1.9E-12 104.5 12.8 68 229-297 98-167 (464)
98 2gv8_A Monooxygenase; FMO, FAD 98.7 2E-07 6.7E-12 99.8 16.8 65 230-297 113-178 (447)
99 1coy_A Cholesterol oxidase; ox 98.7 8.9E-08 3.1E-12 104.1 14.1 68 236-304 230-302 (507)
100 3gwf_A Cyclohexanone monooxyge 98.7 4.4E-08 1.5E-12 107.1 11.4 62 230-297 85-148 (540)
101 4hb9_A Similarities with proba 98.7 5.8E-08 2E-12 102.4 11.9 67 229-306 109-175 (412)
102 3itj_A Thioredoxin reductase 1 98.7 5.3E-08 1.8E-12 99.8 11.2 36 69-104 20-55 (338)
103 1w4x_A Phenylacetone monooxyge 98.7 1.3E-07 4.4E-12 103.8 14.7 38 70-107 15-52 (542)
104 1mo9_A ORF3; nucleotide bindin 98.7 3.6E-07 1.2E-11 99.8 17.8 73 231-306 254-328 (523)
105 3f8d_A Thioredoxin reductase ( 98.7 5.7E-08 1.9E-12 98.8 10.0 57 231-296 69-125 (323)
106 1gpe_A Protein (glucose oxidas 98.7 3.8E-08 1.3E-12 108.8 9.2 62 242-305 241-307 (587)
107 3nks_A Protoporphyrinogen oxid 98.7 8.4E-08 2.9E-12 103.6 11.7 57 232-296 234-290 (477)
108 3ab1_A Ferredoxin--NADP reduct 98.6 3E-07 1E-11 95.3 15.3 60 230-296 72-131 (360)
109 3uox_A Otemo; baeyer-villiger 98.6 5.5E-08 1.9E-12 106.5 9.5 62 230-297 85-148 (545)
110 2q0l_A TRXR, thioredoxin reduc 98.6 1.4E-07 5E-12 95.5 11.5 34 72-105 2-36 (311)
111 2zbw_A Thioredoxin reductase; 98.6 3.1E-07 1E-11 94.1 14.0 36 69-104 3-38 (335)
112 3s5w_A L-ornithine 5-monooxyge 98.6 3.3E-07 1.1E-11 98.5 14.3 61 232-294 127-190 (463)
113 3lzw_A Ferredoxin--NADP reduct 98.6 4.8E-08 1.6E-12 99.9 7.3 57 231-295 66-122 (332)
114 3o0h_A Glutathione reductase; 98.6 2.6E-07 8.8E-12 100.0 12.8 58 231-296 231-288 (484)
115 3urh_A Dihydrolipoyl dehydroge 98.6 9.8E-07 3.4E-11 95.6 16.7 63 231-296 238-300 (491)
116 3fbs_A Oxidoreductase; structu 98.5 5.4E-07 1.8E-11 90.4 12.6 34 71-104 2-35 (297)
117 3kkj_A Amine oxidase, flavin-c 98.5 6.8E-08 2.3E-12 95.2 5.8 37 71-107 2-38 (336)
118 3cty_A Thioredoxin reductase; 98.5 3.9E-07 1.3E-11 92.7 11.4 36 70-105 15-50 (319)
119 1trb_A Thioredoxin reductase; 98.5 1E-07 3.4E-12 97.0 6.5 63 232-296 184-247 (320)
120 2q7v_A Thioredoxin reductase; 98.5 3.3E-07 1.1E-11 93.5 10.3 35 70-104 7-41 (325)
121 1vdc_A NTR, NADPH dependent th 98.5 2.9E-07 9.8E-12 94.2 9.1 56 231-296 69-124 (333)
122 4gut_A Lysine-specific histone 98.5 3.5E-07 1.2E-11 103.7 10.0 39 70-108 335-373 (776)
123 3lad_A Dihydrolipoamide dehydr 98.4 1.2E-06 4E-11 94.6 13.2 35 70-104 2-36 (476)
124 1fl2_A Alkyl hydroperoxide red 98.4 1E-06 3.4E-11 89.1 11.6 59 232-296 56-115 (310)
125 3dgh_A TRXR-1, thioredoxin red 98.4 1.7E-05 5.8E-10 85.6 21.6 63 231-295 226-288 (483)
126 4b63_A L-ornithine N5 monooxyg 98.4 1.2E-06 4.2E-11 94.9 12.4 62 233-294 146-212 (501)
127 3r9u_A Thioredoxin reductase; 98.4 1.3E-06 4.4E-11 88.4 11.7 36 70-105 3-39 (315)
128 1zk7_A HGII, reductase, mercur 98.4 4.4E-06 1.5E-10 89.8 16.5 58 231-297 215-272 (467)
129 2a87_A TRXR, TR, thioredoxin r 98.4 2.5E-06 8.6E-11 87.3 13.0 36 69-104 12-47 (335)
130 3lxd_A FAD-dependent pyridine 98.4 3.3E-06 1.1E-10 89.3 14.1 69 231-306 193-262 (415)
131 3qfa_A Thioredoxin reductase 1 98.3 6.3E-06 2.1E-10 89.8 16.3 36 69-104 30-65 (519)
132 1hyu_A AHPF, alkyl hydroperoxi 98.3 5.5E-06 1.9E-10 90.3 14.8 34 69-102 210-243 (521)
133 2a8x_A Dihydrolipoyl dehydroge 98.3 2.4E-06 8.3E-11 91.8 11.2 35 71-105 3-37 (464)
134 3dgz_A Thioredoxin reductase 2 98.3 1.3E-05 4.4E-10 86.7 16.8 36 69-104 4-39 (488)
135 4gcm_A TRXR, thioredoxin reduc 98.3 5E-07 1.7E-11 91.6 5.3 38 69-106 4-41 (312)
136 2hqm_A GR, grase, glutathione 98.3 7.9E-06 2.7E-10 88.1 14.9 36 70-105 10-45 (479)
137 3k30_A Histamine dehydrogenase 98.3 3.6E-07 1.2E-11 103.3 4.4 40 69-108 389-428 (690)
138 1v59_A Dihydrolipoamide dehydr 98.2 1.2E-06 4.3E-11 94.4 7.7 34 71-104 5-38 (478)
139 1ojt_A Surface protein; redox- 98.2 3.7E-06 1.3E-10 90.8 10.7 34 71-104 6-39 (482)
140 3fpz_A Thiazole biosynthetic e 98.2 1.3E-06 4.4E-11 89.2 5.5 40 69-108 63-104 (326)
141 1xdi_A RV3303C-LPDA; reductase 98.1 1E-05 3.6E-10 87.6 12.1 35 71-105 2-39 (499)
142 4a5l_A Thioredoxin reductase; 98.1 1.6E-06 5.6E-11 87.7 4.9 36 71-106 4-39 (314)
143 3iwa_A FAD-dependent pyridine 98.1 8E-06 2.7E-10 87.9 10.3 35 71-105 3-39 (472)
144 2cdu_A NADPH oxidase; flavoenz 98.1 4.5E-06 1.5E-10 89.4 8.0 33 72-104 1-35 (452)
145 4b1b_A TRXR, thioredoxin reduc 98.1 3.8E-05 1.3E-09 83.6 15.3 36 70-105 41-76 (542)
146 2bc0_A NADH oxidase; flavoprot 98.1 3.6E-06 1.2E-10 91.1 6.6 35 70-104 34-71 (490)
147 3ics_A Coenzyme A-disulfide re 98.1 1.5E-05 5.1E-10 88.3 11.6 37 69-105 34-72 (588)
148 1nhp_A NADH peroxidase; oxidor 98.0 6E-06 2E-10 88.2 7.6 34 72-105 1-36 (447)
149 3oc4_A Oxidoreductase, pyridin 98.0 1.1E-05 3.7E-10 86.3 9.5 33 72-104 3-37 (452)
150 3h8l_A NADH oxidase; membrane 98.0 3.2E-06 1.1E-10 89.3 4.6 33 72-104 2-37 (409)
151 3kd9_A Coenzyme A disulfide re 98.0 1.4E-05 4.9E-10 85.3 9.7 34 71-104 3-38 (449)
152 1v0j_A UDP-galactopyranose mut 98.0 4.7E-06 1.6E-10 87.6 5.6 40 70-109 6-46 (399)
153 3cgb_A Pyridine nucleotide-dis 98.0 1.2E-05 4E-10 86.8 8.4 34 72-105 37-72 (480)
154 3hdq_A UDP-galactopyranose mut 97.9 7.1E-06 2.4E-10 85.6 6.0 41 69-109 27-67 (397)
155 2b9w_A Putative aminooxidase; 97.9 8.9E-06 3E-10 86.1 6.8 39 69-107 4-43 (424)
156 2jae_A L-amino acid oxidase; o 97.9 9.2E-06 3.2E-10 87.8 6.8 40 70-109 10-49 (489)
157 1rsg_A FMS1 protein; FAD bindi 97.9 4.8E-06 1.6E-10 90.7 4.5 40 69-108 6-46 (516)
158 2yg5_A Putrescine oxidase; oxi 97.9 5.9E-06 2E-10 88.4 4.9 40 70-109 4-43 (453)
159 2e1m_A L-glutamate oxidase; L- 97.9 1.1E-05 3.6E-10 83.6 6.4 39 70-108 43-82 (376)
160 3ntd_A FAD-dependent pyridine 97.9 6.4E-05 2.2E-09 82.8 12.9 34 72-105 2-37 (565)
161 1s3e_A Amine oxidase [flavin-c 97.9 1E-05 3.5E-10 88.3 5.8 39 70-108 3-41 (520)
162 4dna_A Probable glutathione re 97.9 7.3E-06 2.5E-10 88.0 4.6 59 231-297 210-269 (463)
163 2ivd_A PPO, PPOX, protoporphyr 97.8 1.1E-05 3.8E-10 86.8 5.6 39 70-108 15-53 (478)
164 3fg2_P Putative rubredoxin red 97.8 2.4E-05 8.2E-10 82.3 7.5 33 72-104 2-36 (404)
165 1i8t_A UDP-galactopyranose mut 97.8 1E-05 3.4E-10 84.1 4.5 37 72-108 2-38 (367)
166 3klj_A NAD(FAD)-dependent dehy 97.8 3.1E-05 1.1E-09 80.8 8.1 35 70-104 8-42 (385)
167 3fg2_P Putative rubredoxin red 97.8 0.00046 1.6E-08 72.4 17.2 63 237-306 189-252 (404)
168 3ihm_A Styrene monooxygenase A 97.8 1.2E-05 3.9E-10 85.5 4.6 35 70-104 21-55 (430)
169 2vvm_A Monoamine oxidase N; FA 97.8 1.5E-05 5.3E-10 86.2 5.4 57 232-296 255-312 (495)
170 4dsg_A UDP-galactopyranose mut 97.8 1.9E-05 6.5E-10 85.2 5.9 40 69-108 7-47 (484)
171 1sez_A Protoporphyrinogen oxid 97.8 1.9E-05 6.6E-10 85.6 6.0 38 71-108 13-50 (504)
172 3sx6_A Sulfide-quinone reducta 97.8 1.3E-05 4.6E-10 85.2 4.4 33 72-104 5-40 (437)
173 3dk9_A Grase, GR, glutathione 97.7 1.3E-05 4.6E-10 86.3 4.0 39 69-107 18-56 (478)
174 2bi7_A UDP-galactopyranose mut 97.7 2.2E-05 7.4E-10 82.0 5.4 38 71-108 3-40 (384)
175 3ic9_A Dihydrolipoamide dehydr 97.7 1.4E-05 4.8E-10 86.4 3.5 37 71-107 8-44 (492)
176 2v3a_A Rubredoxin reductase; a 97.7 0.00027 9.3E-09 73.6 13.1 62 237-306 192-254 (384)
177 1v59_A Dihydrolipoamide dehydr 97.7 0.00045 1.5E-08 74.3 15.0 58 238-296 230-287 (478)
178 3l8k_A Dihydrolipoyl dehydroge 97.6 2.1E-05 7E-10 84.5 3.8 35 71-105 4-38 (466)
179 2iid_A L-amino-acid oxidase; f 97.6 3.8E-05 1.3E-09 83.1 5.4 39 70-108 32-70 (498)
180 2r9z_A Glutathione amide reduc 97.6 3.7E-05 1.3E-09 82.4 5.0 37 70-106 3-39 (463)
181 1dxl_A Dihydrolipoamide dehydr 97.6 4.6E-05 1.6E-09 81.9 5.7 36 69-104 4-39 (470)
182 2qae_A Lipoamide, dihydrolipoy 97.6 3.6E-05 1.2E-09 82.7 4.6 35 71-105 2-36 (468)
183 1onf_A GR, grase, glutathione 97.6 4.7E-05 1.6E-09 82.5 5.1 60 232-297 217-276 (500)
184 1fec_A Trypanothione reductase 97.6 4.6E-05 1.6E-09 82.3 4.9 59 232-297 231-289 (490)
185 1ges_A Glutathione reductase; 97.5 3.6E-05 1.2E-09 82.2 4.0 36 70-105 3-38 (450)
186 1q1r_A Putidaredoxin reductase 97.5 0.0011 3.6E-08 70.3 15.3 62 238-306 197-261 (431)
187 3g5s_A Methylenetetrahydrofola 97.5 6.6E-05 2.2E-09 76.8 5.3 33 72-104 2-34 (443)
188 3c4a_A Probable tryptophan hyd 97.5 4.9E-05 1.7E-09 79.3 4.6 51 228-297 94-144 (381)
189 2eq6_A Pyruvate dehydrogenase 97.5 0.00096 3.3E-08 71.4 14.8 34 71-104 169-202 (464)
190 2eq6_A Pyruvate dehydrogenase 97.5 4.6E-05 1.6E-09 81.7 3.9 35 71-105 6-40 (464)
191 1lvl_A Dihydrolipoamide dehydr 97.5 4.9E-05 1.7E-09 81.3 4.0 37 69-105 3-39 (458)
192 2vdc_G Glutamate synthase [NAD 97.5 8.7E-05 3E-09 79.2 5.8 38 70-107 121-158 (456)
193 2yqu_A 2-oxoglutarate dehydrog 97.5 5.7E-05 2E-09 80.8 4.4 34 71-104 1-34 (455)
194 4eqs_A Coenzyme A disulfide re 97.5 0.0006 2E-08 72.3 12.3 49 243-296 68-116 (437)
195 1ebd_A E3BD, dihydrolipoamide 97.5 0.0012 4E-08 70.5 14.5 34 71-104 170-203 (455)
196 1ebd_A E3BD, dihydrolipoamide 97.5 5.9E-05 2E-09 80.6 4.3 35 71-105 3-37 (455)
197 1zmd_A Dihydrolipoyl dehydroge 97.5 5.1E-05 1.7E-09 81.6 3.8 36 70-105 5-40 (474)
198 3ef6_A Toluene 1,2-dioxygenase 97.5 0.00051 1.7E-08 72.2 11.4 61 238-306 191-252 (410)
199 2yqu_A 2-oxoglutarate dehydrog 97.5 0.00061 2.1E-08 72.7 12.2 34 71-104 167-200 (455)
200 4e6k_G BFD, bacterioferritin-a 97.5 0.00011 3.6E-09 56.1 4.3 52 536-593 3-54 (73)
201 1b37_A Protein (polyamine oxid 97.5 9.7E-05 3.3E-09 79.3 5.8 39 70-108 3-42 (472)
202 2hqm_A GR, grase, glutathione 97.4 0.0011 3.6E-08 71.3 13.4 35 70-104 184-218 (479)
203 1zmd_A Dihydrolipoyl dehydroge 97.4 0.0014 4.8E-08 70.3 14.3 34 71-104 178-211 (474)
204 1fl2_A Alkyl hydroperoxide red 97.4 0.0019 6.4E-08 64.8 14.4 50 245-296 193-242 (310)
205 3itj_A Thioredoxin reductase 1 97.4 0.0017 5.9E-08 65.7 14.1 50 245-296 222-271 (338)
206 3s5w_A L-ornithine 5-monooxyge 97.4 0.00056 1.9E-08 73.1 10.7 50 245-297 329-378 (463)
207 3cty_A Thioredoxin reductase; 97.4 0.0016 5.4E-08 65.7 13.5 51 244-296 202-252 (319)
208 1ges_A Glutathione reductase; 97.3 0.0014 4.8E-08 69.8 13.1 34 71-104 167-200 (450)
209 2wpf_A Trypanothione reductase 97.3 9.2E-05 3.1E-09 80.0 3.9 32 71-102 7-39 (495)
210 1nhp_A NADH peroxidase; oxidor 97.3 0.0014 4.8E-08 69.6 12.9 35 70-104 148-182 (447)
211 3cgb_A Pyridine nucleotide-dis 97.3 0.0014 4.7E-08 70.4 12.9 35 70-104 185-219 (480)
212 2qae_A Lipoamide, dihydrolipoy 97.3 0.0023 7.9E-08 68.4 14.6 34 71-104 174-207 (468)
213 3iwa_A FAD-dependent pyridine 97.3 0.0016 5.6E-08 69.7 13.3 62 237-306 207-269 (472)
214 1dxl_A Dihydrolipoamide dehydr 97.3 0.0012 4.1E-08 70.7 12.1 34 71-104 177-210 (470)
215 3dk9_A Grase, GR, glutathione 97.3 0.0027 9.1E-08 68.1 14.8 34 71-104 187-220 (478)
216 2z3y_A Lysine-specific histone 97.3 0.00022 7.4E-09 80.0 6.1 39 70-108 106-144 (662)
217 1o94_A Tmadh, trimethylamine d 97.3 0.00024 8.4E-09 80.4 6.6 38 70-107 388-425 (729)
218 1xdi_A RV3303C-LPDA; reductase 97.3 0.0018 6.1E-08 69.9 13.1 34 71-104 182-215 (499)
219 2xag_A Lysine-specific histone 97.3 0.00025 8.5E-09 81.1 6.5 39 70-108 277-315 (852)
220 2r9z_A Glutathione amide reduc 97.3 0.0022 7.6E-08 68.5 13.6 34 71-104 166-199 (463)
221 2gqw_A Ferredoxin reductase; f 97.2 0.00019 6.6E-09 75.4 4.9 64 231-306 186-250 (408)
222 3ab1_A Ferredoxin--NADP reduct 97.2 0.0026 9E-08 65.3 13.4 59 243-304 213-272 (360)
223 3dgz_A Thioredoxin reductase 2 97.2 0.0045 1.5E-07 66.6 15.7 55 239-295 232-286 (488)
224 2a8x_A Dihydrolipoyl dehydroge 97.2 0.0031 1.1E-07 67.4 14.4 34 71-104 171-204 (464)
225 1ps9_A 2,4-dienoyl-COA reducta 97.2 0.0003 1E-08 79.1 6.2 38 70-107 372-409 (671)
226 1fec_A Trypanothione reductase 97.2 0.0017 5.7E-08 70.0 11.7 34 71-104 187-223 (490)
227 2zbw_A Thioredoxin reductase; 97.1 0.0051 1.7E-07 62.3 14.4 59 243-304 202-261 (335)
228 2cdu_A NADPH oxidase; flavoenz 97.1 0.0026 8.7E-08 67.8 12.5 34 71-104 149-182 (452)
229 1onf_A GR, grase, glutathione 97.1 0.004 1.4E-07 67.1 13.9 34 71-104 176-209 (500)
230 3h28_A Sulfide-quinone reducta 97.1 0.00037 1.3E-08 73.8 5.5 58 234-299 202-259 (430)
231 2q0l_A TRXR, thioredoxin reduc 97.1 0.0068 2.3E-07 60.6 14.7 50 245-296 192-241 (311)
232 2x8g_A Thioredoxin glutathione 97.1 0.00031 1.1E-08 77.8 5.0 35 69-103 105-139 (598)
233 2q7v_A Thioredoxin reductase; 97.1 0.0058 2E-07 61.6 14.1 49 245-296 201-249 (325)
234 1q1r_A Putidaredoxin reductase 97.1 0.00044 1.5E-08 73.3 5.7 34 71-104 4-39 (431)
235 3lad_A Dihydrolipoamide dehydr 97.1 0.0043 1.5E-07 66.4 13.7 34 71-104 180-213 (476)
236 1lvl_A Dihydrolipoamide dehydr 97.1 0.002 6.7E-08 68.8 10.8 34 71-104 171-204 (458)
237 2gqw_A Ferredoxin reductase; f 97.1 0.0038 1.3E-07 65.5 12.7 34 71-104 145-178 (408)
238 3f8d_A Thioredoxin reductase ( 97.1 0.0072 2.5E-07 60.5 14.4 58 245-305 203-261 (323)
239 2v3a_A Rubredoxin reductase; a 97.1 0.00041 1.4E-08 72.2 5.2 34 71-104 4-39 (384)
240 2wpf_A Trypanothione reductase 97.1 0.0032 1.1E-07 67.8 12.4 52 238-296 241-292 (495)
241 3ntd_A FAD-dependent pyridine 97.0 0.0049 1.7E-07 67.6 13.8 34 71-104 151-184 (565)
242 4dna_A Probable glutathione re 97.0 0.0034 1.1E-07 67.1 12.0 34 71-104 170-203 (463)
243 3ic9_A Dihydrolipoamide dehydr 97.0 0.0067 2.3E-07 65.3 14.2 34 71-104 174-207 (492)
244 1ojt_A Surface protein; redox- 97.0 0.002 7E-08 69.1 9.9 34 71-104 185-218 (482)
245 1lqt_A FPRA; NADP+ derivative, 96.9 0.00049 1.7E-08 73.4 4.6 35 71-105 3-44 (456)
246 1vdc_A NTR, NADPH dependent th 96.9 0.0083 2.8E-07 60.6 13.6 53 244-296 207-259 (333)
247 1hyu_A AHPF, alkyl hydroperoxi 96.9 0.0065 2.2E-07 65.9 13.5 49 245-295 404-452 (521)
248 3oc4_A Oxidoreductase, pyridin 96.9 0.008 2.7E-07 63.9 14.0 33 72-104 148-180 (452)
249 2bc0_A NADH oxidase; flavoprot 96.9 0.004 1.4E-07 67.0 11.8 34 71-104 194-227 (490)
250 1vg0_A RAB proteins geranylger 96.9 0.00077 2.6E-08 74.1 5.9 58 231-294 377-435 (650)
251 1xhc_A NADH oxidase /nitrite r 96.9 0.00054 1.9E-08 70.9 4.3 34 71-105 8-41 (367)
252 1cjc_A Protein (adrenodoxin re 96.9 0.0008 2.7E-08 71.8 5.4 37 70-106 5-43 (460)
253 1gte_A Dihydropyrimidine dehyd 96.8 0.00083 2.8E-08 79.0 5.8 38 71-108 187-225 (1025)
254 1m6i_A Programmed cell death p 96.8 0.00072 2.5E-08 72.9 4.2 68 231-306 225-293 (493)
255 3ef6_A Toluene 1,2-dioxygenase 96.8 0.00097 3.3E-08 70.1 5.1 33 72-104 3-37 (410)
256 1cjc_A Protein (adrenodoxin re 96.8 0.011 3.7E-07 63.0 13.2 52 245-297 270-334 (460)
257 3ayj_A Pro-enzyme of L-phenyla 96.8 0.00055 1.9E-08 76.2 3.2 34 71-104 56-97 (721)
258 3r9u_A Thioredoxin reductase; 96.8 0.013 4.4E-07 58.5 13.2 50 244-296 195-244 (315)
259 3ics_A Coenzyme A-disulfide re 96.8 0.0067 2.3E-07 66.8 12.0 34 71-104 187-220 (588)
260 3qfa_A Thioredoxin reductase 1 96.7 0.021 7.1E-07 61.8 15.6 32 72-103 211-242 (519)
261 1m6i_A Programmed cell death p 96.7 0.014 4.9E-07 62.6 13.6 33 72-104 181-217 (493)
262 3lzw_A Ferredoxin--NADP reduct 96.6 0.017 5.9E-07 58.0 12.6 51 243-296 200-250 (332)
263 2x8g_A Thioredoxin glutathione 96.5 0.038 1.3E-06 60.9 15.8 32 72-103 287-318 (598)
264 1gte_A Dihydropyrimidine dehyd 96.4 0.021 7.1E-07 67.1 13.9 32 73-104 334-366 (1025)
265 1lqt_A FPRA; NADP+ derivative, 96.4 0.011 3.8E-07 62.8 10.4 60 236-298 250-328 (456)
266 2a87_A TRXR, TR, thioredoxin r 96.4 0.01 3.5E-07 60.1 9.7 50 244-296 203-252 (335)
267 4g6h_A Rotenone-insensitive NA 96.3 0.012 4.2E-07 63.3 10.1 59 233-297 273-333 (502)
268 4b1b_A TRXR, thioredoxin reduc 96.3 0.038 1.3E-06 59.9 13.9 34 70-103 222-255 (542)
269 2vdc_G Glutamate synthase [NAD 96.3 0.011 3.8E-07 62.7 9.5 33 72-104 265-298 (456)
270 2pq4_B Periplasmic nitrate red 96.2 0.0021 7E-08 41.0 2.0 18 1-18 3-20 (35)
271 3kd9_A Coenzyme A disulfide re 96.2 0.021 7.1E-07 60.6 10.9 33 72-104 149-181 (449)
272 4eqs_A Coenzyme A disulfide re 96.0 0.016 5.6E-07 61.2 9.3 34 71-104 147-180 (437)
273 4g6h_A Rotenone-insensitive NA 96.0 0.0035 1.2E-07 67.6 4.0 34 71-104 42-75 (502)
274 3vrd_B FCCB subunit, flavocyto 95.9 0.0048 1.6E-07 64.4 4.6 33 73-105 4-38 (401)
275 4a5l_A Thioredoxin reductase; 95.9 0.08 2.7E-06 52.7 13.5 33 72-104 153-185 (314)
276 3hyw_A Sulfide-quinone reducta 95.9 0.0056 1.9E-07 64.6 4.8 62 235-304 203-264 (430)
277 3fwz_A Inner membrane protein 94.9 0.033 1.1E-06 48.5 5.8 34 71-104 7-40 (140)
278 2g1u_A Hypothetical protein TM 94.9 0.03 1E-06 49.7 5.5 34 71-104 19-52 (155)
279 3llv_A Exopolyphosphatase-rela 94.6 0.034 1.2E-06 48.4 5.0 32 72-103 7-38 (141)
280 1lss_A TRK system potassium up 94.5 0.039 1.4E-06 47.5 5.1 32 72-103 5-36 (140)
281 3ado_A Lambda-crystallin; L-gu 94.4 0.035 1.2E-06 55.6 5.1 32 72-103 7-38 (319)
282 3ic5_A Putative saccharopine d 94.4 0.041 1.4E-06 45.8 4.8 32 72-103 6-38 (118)
283 1id1_A Putative potassium chan 94.3 0.054 1.8E-06 47.8 5.6 32 72-103 4-35 (153)
284 3klj_A NAD(FAD)-dependent dehy 93.8 0.043 1.5E-06 56.8 4.6 33 72-104 147-179 (385)
285 4gcm_A TRXR, thioredoxin reduc 93.8 0.043 1.5E-06 54.8 4.4 33 72-104 146-178 (312)
286 2hmt_A YUAA protein; RCK, KTN, 93.2 0.074 2.5E-06 46.0 4.4 31 73-103 8-38 (144)
287 1xhc_A NADH oxidase /nitrite r 93.1 0.07 2.4E-06 54.8 4.8 33 72-104 144-176 (367)
288 3k6j_A Protein F01G10.3, confi 93.0 0.05 1.7E-06 57.2 3.5 33 72-104 55-87 (460)
289 1f0y_A HCDH, L-3-hydroxyacyl-C 92.9 0.11 3.9E-06 51.5 5.8 32 73-104 17-48 (302)
290 2dpo_A L-gulonate 3-dehydrogen 92.8 0.095 3.3E-06 52.6 5.1 33 72-104 7-39 (319)
291 4e12_A Diketoreductase; oxidor 92.8 0.099 3.4E-06 51.5 5.2 33 72-104 5-37 (283)
292 3c85_A Putative glutathione-re 92.5 0.12 4.1E-06 47.0 5.0 33 72-104 40-73 (183)
293 3l4b_C TRKA K+ channel protien 92.0 0.12 4E-06 48.7 4.3 32 73-104 2-33 (218)
294 3g0o_A 3-hydroxyisobutyrate de 91.6 0.18 6.2E-06 50.1 5.4 33 71-103 7-39 (303)
295 3dfz_A SIRC, precorrin-2 dehyd 91.5 0.14 4.9E-06 48.2 4.2 33 71-103 31-63 (223)
296 1zej_A HBD-9, 3-hydroxyacyl-CO 91.4 0.17 5.9E-06 50.0 5.0 33 71-104 12-44 (293)
297 1vg0_A RAB proteins geranylger 91.4 0.44 1.5E-05 52.3 8.6 40 70-109 7-46 (650)
298 3d1c_A Flavin-containing putat 91.4 0.16 5.5E-06 51.7 5.0 33 72-104 167-199 (369)
299 3i83_A 2-dehydropantoate 2-red 91.4 0.18 6.3E-06 50.5 5.3 32 72-103 3-34 (320)
300 2vvm_A Monoamine oxidase N; FA 91.2 0.39 1.3E-05 51.2 8.0 39 70-108 38-76 (495)
301 3k96_A Glycerol-3-phosphate de 91.2 0.2 7E-06 51.0 5.4 34 70-103 28-61 (356)
302 1pzg_A LDH, lactate dehydrogen 91.2 0.2 7E-06 50.5 5.3 34 71-104 9-43 (331)
303 3hn2_A 2-dehydropantoate 2-red 91.1 0.18 6.2E-06 50.4 4.9 32 72-103 3-34 (312)
304 2raf_A Putative dinucleotide-b 90.8 0.25 8.6E-06 46.1 5.2 33 72-104 20-52 (209)
305 1lld_A L-lactate dehydrogenase 90.7 0.24 8.2E-06 49.6 5.4 32 72-103 8-41 (319)
306 1kyq_A Met8P, siroheme biosynt 90.7 0.11 3.6E-06 50.8 2.5 33 71-103 13-45 (274)
307 1zcj_A Peroxisomal bifunctiona 90.6 0.2 6.8E-06 53.1 4.9 33 72-104 38-70 (463)
308 1ks9_A KPA reductase;, 2-dehyd 90.6 0.25 8.4E-06 48.5 5.3 32 73-104 2-33 (291)
309 3ghy_A Ketopantoate reductase 90.5 0.25 8.6E-06 49.9 5.3 31 72-102 4-34 (335)
310 2y0c_A BCEC, UDP-glucose dehyd 90.4 0.25 8.5E-06 52.5 5.4 33 71-103 8-40 (478)
311 1jw9_B Molybdopterin biosynthe 90.2 0.23 7.7E-06 47.9 4.4 34 72-105 32-66 (249)
312 2hjr_A Malate dehydrogenase; m 90.2 0.28 9.7E-06 49.3 5.3 33 72-104 15-48 (328)
313 3lk7_A UDP-N-acetylmuramoylala 90.2 0.28 9.5E-06 51.8 5.5 33 72-104 10-42 (451)
314 1y6j_A L-lactate dehydrogenase 90.2 0.3 1E-05 48.9 5.5 33 71-103 7-41 (318)
315 2xve_A Flavin-containing monoo 90.0 0.23 7.7E-06 52.8 4.7 33 72-104 198-230 (464)
316 3tl2_A Malate dehydrogenase; c 89.9 0.36 1.2E-05 48.2 5.8 33 71-103 8-41 (315)
317 2ew2_A 2-dehydropantoate 2-red 89.9 0.29 9.9E-06 48.6 5.2 31 73-103 5-35 (316)
318 1zk7_A HGII, reductase, mercur 89.9 0.28 9.4E-06 52.1 5.3 34 71-104 176-209 (467)
319 3mog_A Probable 3-hydroxybutyr 89.9 0.31 1.1E-05 51.8 5.6 33 72-104 6-38 (483)
320 2v6b_A L-LDH, L-lactate dehydr 89.8 0.31 1.1E-05 48.4 5.2 31 73-103 2-34 (304)
321 4dio_A NAD(P) transhydrogenase 89.7 0.32 1.1E-05 50.1 5.3 34 71-104 190-223 (405)
322 2ewd_A Lactate dehydrogenase,; 89.6 0.31 1E-05 48.8 5.0 33 72-104 5-38 (317)
323 4a7p_A UDP-glucose dehydrogena 89.6 0.34 1.2E-05 50.9 5.5 35 70-104 7-41 (446)
324 2x5o_A UDP-N-acetylmuramoylala 89.5 0.19 6.6E-06 52.9 3.6 33 73-105 7-39 (439)
325 3gg2_A Sugar dehydrogenase, UD 89.4 0.32 1.1E-05 51.3 5.2 33 72-104 3-35 (450)
326 3l9w_A Glutathione-regulated p 89.4 0.34 1.2E-05 50.4 5.3 33 72-104 5-37 (413)
327 2gv8_A Monooxygenase; FMO, FAD 89.2 0.25 8.5E-06 52.1 4.3 33 72-104 213-246 (447)
328 3g17_A Similar to 2-dehydropan 89.2 0.23 8E-06 49.1 3.7 32 72-103 3-34 (294)
329 1trb_A Thioredoxin reductase; 89.1 0.28 9.5E-06 48.8 4.3 33 72-104 146-178 (320)
330 3l6d_A Putative oxidoreductase 89.1 0.45 1.6E-05 47.3 5.8 33 71-103 9-41 (306)
331 2a9f_A Putative malic enzyme ( 89.1 0.31 1.1E-05 49.6 4.6 35 70-104 187-222 (398)
332 3urh_A Dihydrolipoyl dehydroge 89.0 0.29 9.9E-06 52.3 4.6 34 71-104 198-231 (491)
333 3g79_A NDP-N-acetyl-D-galactos 89.0 0.38 1.3E-05 50.9 5.4 33 72-104 19-53 (478)
334 3lxd_A FAD-dependent pyridine 88.9 0.36 1.2E-05 50.3 5.1 34 71-104 152-185 (415)
335 3gwf_A Cyclohexanone monooxyge 88.9 0.27 9.1E-06 53.3 4.3 33 72-104 179-211 (540)
336 1t2d_A LDH-P, L-lactate dehydr 88.8 0.42 1.4E-05 47.9 5.3 32 72-103 5-37 (322)
337 1bg6_A N-(1-D-carboxylethyl)-L 88.7 0.41 1.4E-05 48.6 5.4 32 72-103 5-36 (359)
338 3ego_A Probable 2-dehydropanto 88.7 0.41 1.4E-05 47.6 5.2 31 72-103 3-33 (307)
339 1z82_A Glycerol-3-phosphate de 88.7 0.43 1.5E-05 48.1 5.4 34 70-103 13-46 (335)
340 3l8k_A Dihydrolipoyl dehydroge 88.7 0.39 1.3E-05 50.9 5.3 34 71-104 172-205 (466)
341 3doj_A AT3G25530, dehydrogenas 88.6 0.5 1.7E-05 47.1 5.7 33 72-104 22-54 (310)
342 1nyt_A Shikimate 5-dehydrogena 88.6 0.44 1.5E-05 46.5 5.2 33 71-103 119-151 (271)
343 3ktd_A Prephenate dehydrogenas 88.6 0.5 1.7E-05 47.7 5.7 32 72-103 9-40 (341)
344 3vtf_A UDP-glucose 6-dehydroge 88.5 0.42 1.4E-05 49.9 5.2 34 70-103 20-53 (444)
345 3hwr_A 2-dehydropantoate 2-red 88.4 0.42 1.4E-05 47.8 5.1 31 72-103 20-50 (318)
346 3p2y_A Alanine dehydrogenase/p 88.4 0.35 1.2E-05 49.3 4.4 34 71-104 184-217 (381)
347 3dtt_A NADP oxidoreductase; st 88.3 0.48 1.7E-05 45.3 5.2 33 71-103 19-51 (245)
348 2qyt_A 2-dehydropantoate 2-red 88.1 0.31 1.1E-05 48.5 3.9 31 72-102 9-45 (317)
349 3oj0_A Glutr, glutamyl-tRNA re 88.1 0.19 6.4E-06 43.8 1.9 33 71-103 21-53 (144)
350 4g65_A TRK system potassium up 88.1 0.22 7.4E-06 52.8 2.8 33 72-104 4-36 (461)
351 1mv8_A GMD, GDP-mannose 6-dehy 88.0 0.4 1.4E-05 50.3 4.8 31 73-103 2-32 (436)
352 2vns_A Metalloreductase steap3 88.0 0.52 1.8E-05 44.1 5.1 32 72-103 29-60 (215)
353 3uox_A Otemo; baeyer-villiger 88.0 0.31 1.1E-05 52.8 4.0 33 72-104 186-218 (545)
354 3pef_A 6-phosphogluconate dehy 87.9 0.49 1.7E-05 46.5 5.1 32 73-104 3-34 (287)
355 1vl6_A Malate oxidoreductase; 87.9 0.42 1.4E-05 48.7 4.6 34 70-103 191-225 (388)
356 4ap3_A Steroid monooxygenase; 87.9 0.33 1.1E-05 52.7 4.1 33 72-104 192-224 (549)
357 3zwc_A Peroxisomal bifunctiona 87.9 0.4 1.4E-05 53.7 4.9 33 72-104 317-349 (742)
358 3pid_A UDP-glucose 6-dehydroge 87.8 0.47 1.6E-05 49.5 5.0 32 71-103 36-67 (432)
359 1ur5_A Malate dehydrogenase; o 87.6 0.56 1.9E-05 46.7 5.3 32 72-103 3-35 (309)
360 1mo9_A ORF3; nucleotide bindin 87.4 0.5 1.7E-05 50.9 5.3 33 72-104 215-247 (523)
361 1h6d_A Precursor form of gluco 87.4 0.24 8.2E-06 52.0 2.6 35 69-103 81-118 (433)
362 3eag_A UDP-N-acetylmuramate:L- 87.4 0.5 1.7E-05 47.4 4.9 33 72-104 5-38 (326)
363 2wtb_A MFP2, fatty acid multif 87.3 0.44 1.5E-05 53.4 4.8 32 73-104 314-345 (725)
364 1pjc_A Protein (L-alanine dehy 87.3 0.53 1.8E-05 48.0 5.0 32 72-103 168-199 (361)
365 1guz_A Malate dehydrogenase; o 87.2 0.6 2E-05 46.5 5.3 32 73-104 2-35 (310)
366 3rui_A Ubiquitin-like modifier 87.2 0.65 2.2E-05 46.6 5.5 36 71-106 34-70 (340)
367 1txg_A Glycerol-3-phosphate de 87.2 0.43 1.5E-05 48.0 4.3 30 73-102 2-31 (335)
368 1a5z_A L-lactate dehydrogenase 87.1 0.47 1.6E-05 47.5 4.5 31 73-103 2-34 (319)
369 3gvi_A Malate dehydrogenase; N 87.0 0.71 2.4E-05 46.2 5.7 34 71-104 7-41 (324)
370 4dll_A 2-hydroxy-3-oxopropiona 87.0 0.62 2.1E-05 46.6 5.3 32 72-103 32-63 (320)
371 3h8v_A Ubiquitin-like modifier 86.9 0.48 1.6E-05 46.6 4.3 35 71-105 36-71 (292)
372 1zud_1 Adenylyltransferase THI 86.9 0.96 3.3E-05 43.5 6.4 35 71-105 28-63 (251)
373 2eez_A Alanine dehydrogenase; 86.9 0.57 1.9E-05 48.0 5.0 32 72-103 167-198 (369)
374 1jay_A Coenzyme F420H2:NADP+ o 86.8 0.58 2E-05 43.5 4.7 31 73-103 2-33 (212)
375 1x13_A NAD(P) transhydrogenase 86.8 0.6 2E-05 48.3 5.2 33 72-104 173-205 (401)
376 3pqe_A L-LDH, L-lactate dehydr 86.7 0.62 2.1E-05 46.7 5.1 33 71-103 5-39 (326)
377 1vpd_A Tartronate semialdehyde 86.6 0.6 2.1E-05 46.0 4.9 32 72-103 6-37 (299)
378 3qha_A Putative oxidoreductase 86.5 0.51 1.7E-05 46.6 4.3 33 72-104 16-48 (296)
379 3phh_A Shikimate dehydrogenase 86.5 0.71 2.4E-05 44.8 5.2 33 71-103 118-150 (269)
380 2h78_A Hibadh, 3-hydroxyisobut 86.5 0.6 2E-05 46.2 4.9 32 72-103 4-35 (302)
381 3ggo_A Prephenate dehydrogenas 86.2 0.86 2.9E-05 45.4 5.8 32 72-103 34-67 (314)
382 2f1k_A Prephenate dehydrogenas 86.2 0.71 2.4E-05 45.0 5.2 31 73-103 2-32 (279)
383 3dgh_A TRXR-1, thioredoxin red 86.1 0.66 2.2E-05 49.3 5.3 33 72-104 188-220 (483)
384 3pdu_A 3-hydroxyisobutyrate de 86.1 0.51 1.7E-05 46.3 4.1 32 73-104 3-34 (287)
385 1wdk_A Fatty oxidation complex 86.1 0.51 1.8E-05 52.8 4.5 33 72-104 315-347 (715)
386 3dfu_A Uncharacterized protein 86.1 0.32 1.1E-05 46.1 2.4 31 72-102 7-37 (232)
387 2i6t_A Ubiquitin-conjugating e 86.0 0.63 2.2E-05 46.1 4.6 33 72-104 15-49 (303)
388 4e21_A 6-phosphogluconate dehy 86.0 0.76 2.6E-05 46.7 5.4 32 72-103 23-54 (358)
389 3p7m_A Malate dehydrogenase; p 85.9 0.91 3.1E-05 45.3 5.8 34 71-104 5-39 (321)
390 2p4q_A 6-phosphogluconate dehy 85.9 0.81 2.8E-05 48.8 5.7 35 70-104 9-43 (497)
391 2zyd_A 6-phosphogluconate dehy 85.9 0.67 2.3E-05 49.2 5.1 35 69-103 13-47 (480)
392 1evy_A Glycerol-3-phosphate de 85.8 0.41 1.4E-05 48.9 3.3 31 73-103 17-47 (366)
393 3ond_A Adenosylhomocysteinase; 85.8 0.73 2.5E-05 48.5 5.2 32 72-103 266-297 (488)
394 1hyh_A L-hicdh, L-2-hydroxyiso 85.7 0.61 2.1E-05 46.4 4.4 31 73-103 3-35 (309)
395 2uyy_A N-PAC protein; long-cha 85.6 0.96 3.3E-05 45.0 5.9 32 72-103 31-62 (316)
396 2egg_A AROE, shikimate 5-dehyd 85.5 0.73 2.5E-05 45.5 4.9 33 71-103 141-174 (297)
397 1l7d_A Nicotinamide nucleotide 85.5 0.79 2.7E-05 47.2 5.3 34 71-104 172-205 (384)
398 2pv7_A T-protein [includes: ch 85.5 0.71 2.4E-05 45.6 4.8 32 73-104 23-55 (298)
399 1p77_A Shikimate 5-dehydrogena 85.4 0.58 2E-05 45.6 4.0 32 72-103 120-151 (272)
400 4ffl_A PYLC; amino acid, biosy 85.4 0.77 2.6E-05 46.7 5.2 32 73-104 3-34 (363)
401 1edz_A 5,10-methylenetetrahydr 85.4 0.67 2.3E-05 46.0 4.4 33 71-103 177-210 (320)
402 2vhw_A Alanine dehydrogenase; 85.3 0.76 2.6E-05 47.2 5.0 32 72-103 169-200 (377)
403 1dlj_A UDP-glucose dehydrogena 85.3 0.58 2E-05 48.5 4.1 30 73-103 2-31 (402)
404 3ew7_A LMO0794 protein; Q8Y8U8 85.2 0.89 3E-05 42.1 5.1 31 73-103 2-33 (221)
405 4huj_A Uncharacterized protein 85.1 0.53 1.8E-05 44.2 3.5 32 72-103 24-56 (220)
406 3ojo_A CAP5O; rossmann fold, c 85.0 0.75 2.6E-05 47.9 4.8 33 72-104 12-44 (431)
407 3h2s_A Putative NADH-flavin re 85.0 0.87 3E-05 42.4 5.0 30 74-103 3-33 (224)
408 3o0h_A Glutathione reductase; 85.0 0.81 2.8E-05 48.7 5.3 34 71-104 191-224 (484)
409 1pjq_A CYSG, siroheme synthase 84.9 0.73 2.5E-05 48.6 4.8 32 72-103 13-44 (457)
410 1yqg_A Pyrroline-5-carboxylate 84.9 0.73 2.5E-05 44.4 4.5 31 73-103 2-33 (263)
411 4ezb_A Uncharacterized conserv 84.9 0.72 2.5E-05 46.1 4.5 33 72-104 25-58 (317)
412 3e8x_A Putative NAD-dependent 84.8 0.96 3.3E-05 42.7 5.2 33 72-104 22-55 (236)
413 3fbs_A Oxidoreductase; structu 84.6 0.58 2E-05 45.6 3.7 33 71-104 141-173 (297)
414 1nvt_A Shikimate 5'-dehydrogen 84.6 0.66 2.2E-05 45.6 4.0 31 72-103 129-159 (287)
415 2g5c_A Prephenate dehydrogenas 84.5 0.94 3.2E-05 44.2 5.1 31 73-103 3-35 (281)
416 3qsg_A NAD-binding phosphogluc 84.4 0.78 2.7E-05 45.7 4.5 32 72-103 25-57 (312)
417 3c24_A Putative oxidoreductase 84.4 0.92 3.2E-05 44.4 5.0 32 72-103 12-44 (286)
418 1oju_A MDH, malate dehydrogena 84.3 0.8 2.8E-05 45.1 4.5 31 73-103 2-34 (294)
419 4gwg_A 6-phosphogluconate dehy 84.2 1.1 3.7E-05 47.5 5.7 33 72-104 5-37 (484)
420 3ldh_A Lactate dehydrogenase; 84.2 0.79 2.7E-05 45.9 4.4 32 72-103 22-55 (330)
421 3jyo_A Quinate/shikimate dehyd 84.1 1 3.6E-05 44.1 5.2 33 71-103 127-160 (283)
422 3tnl_A Shikimate dehydrogenase 84.1 0.98 3.4E-05 44.9 5.0 33 71-103 154-187 (315)
423 3u62_A Shikimate dehydrogenase 84.1 0.99 3.4E-05 43.4 4.9 31 73-103 110-141 (253)
424 2hk9_A Shikimate dehydrogenase 83.8 0.86 3E-05 44.4 4.5 32 72-103 130-161 (275)
425 1leh_A Leucine dehydrogenase; 83.8 1 3.5E-05 45.7 5.2 32 71-102 173-204 (364)
426 1pgj_A 6PGDH, 6-PGDH, 6-phosph 83.8 0.97 3.3E-05 48.0 5.2 31 73-103 3-33 (478)
427 3don_A Shikimate dehydrogenase 83.8 0.81 2.8E-05 44.7 4.2 33 72-104 118-151 (277)
428 3tri_A Pyrroline-5-carboxylate 83.8 1.3 4.3E-05 43.4 5.6 33 72-104 4-39 (280)
429 4aj2_A L-lactate dehydrogenase 83.8 1.2 4.2E-05 44.5 5.6 33 71-103 19-53 (331)
430 2aef_A Calcium-gated potassium 83.7 0.43 1.5E-05 45.2 2.2 32 72-104 10-41 (234)
431 2iz1_A 6-phosphogluconate dehy 83.7 1.1 3.9E-05 47.4 5.6 33 71-103 5-37 (474)
432 2gf2_A Hibadh, 3-hydroxyisobut 83.7 0.98 3.4E-05 44.4 4.9 31 73-103 2-32 (296)
433 2pgd_A 6-phosphogluconate dehy 83.6 1 3.5E-05 47.8 5.3 32 72-103 3-34 (482)
434 1ldn_A L-lactate dehydrogenase 83.6 1.1 3.7E-05 44.7 5.1 32 72-103 7-40 (316)
435 3ius_A Uncharacterized conserv 83.6 0.82 2.8E-05 44.5 4.3 32 72-103 6-37 (286)
436 4a9w_A Monooxygenase; baeyer-v 83.6 0.76 2.6E-05 46.1 4.1 32 72-104 164-195 (357)
437 4gsl_A Ubiquitin-like modifier 83.5 1.1 3.9E-05 48.3 5.5 36 71-106 326-362 (615)
438 3nep_X Malate dehydrogenase; h 83.4 0.95 3.2E-05 45.1 4.6 32 73-104 2-35 (314)
439 3gpi_A NAD-dependent epimerase 83.4 1.3 4.3E-05 43.2 5.5 32 73-104 5-36 (286)
440 1hdo_A Biliverdin IX beta redu 83.3 1.2 4E-05 40.8 5.0 32 73-104 5-37 (206)
441 2rcy_A Pyrroline carboxylate r 83.3 1 3.4E-05 43.4 4.7 33 72-104 5-41 (262)
442 1a4i_A Methylenetetrahydrofola 83.2 1.1 3.6E-05 44.0 4.7 34 70-103 164-198 (301)
443 3vps_A TUNA, NAD-dependent epi 83.2 1.2 4.1E-05 44.0 5.3 33 72-104 8-41 (321)
444 3cky_A 2-hydroxymethyl glutara 83.2 1.1 3.8E-05 44.1 5.0 32 72-103 5-36 (301)
445 1yj8_A Glycerol-3-phosphate de 83.2 0.71 2.4E-05 47.3 3.7 33 72-104 22-61 (375)
446 1x0v_A GPD-C, GPDH-C, glycerol 83.0 0.66 2.2E-05 47.0 3.3 33 72-104 9-48 (354)
447 3vh1_A Ubiquitin-like modifier 83.0 1.1 3.8E-05 48.3 5.2 36 71-106 327-363 (598)
448 3pwz_A Shikimate dehydrogenase 83.0 1.3 4.3E-05 43.2 5.2 33 71-103 120-153 (272)
449 3d0o_A L-LDH 1, L-lactate dehy 82.8 1.1 3.9E-05 44.6 4.9 34 70-103 5-40 (317)
450 3h5n_A MCCB protein; ubiquitin 82.7 1 3.5E-05 45.6 4.6 35 71-105 118-153 (353)
451 3d1l_A Putative NADP oxidoredu 82.7 0.92 3.2E-05 43.8 4.2 32 72-103 11-43 (266)
452 1o94_A Tmadh, trimethylamine d 82.7 0.84 2.9E-05 51.3 4.4 33 72-104 529-563 (729)
453 3c7a_A Octopine dehydrogenase; 82.7 0.74 2.5E-05 47.7 3.6 29 73-101 4-33 (404)
454 2o3j_A UDP-glucose 6-dehydroge 82.7 1 3.5E-05 47.8 4.8 32 72-103 10-43 (481)
455 2cvz_A Dehydrogenase, 3-hydrox 82.6 0.99 3.4E-05 44.1 4.4 30 73-103 3-32 (289)
456 3o38_A Short chain dehydrogena 82.6 0.88 3E-05 43.9 3.9 32 72-103 23-56 (266)
457 2rir_A Dipicolinate synthase, 82.5 1.2 4.2E-05 43.9 5.1 33 71-103 157-189 (300)
458 3fi9_A Malate dehydrogenase; s 82.4 1.4 4.8E-05 44.3 5.4 32 72-103 9-43 (343)
459 1np3_A Ketol-acid reductoisome 82.2 1.3 4.5E-05 44.6 5.2 31 73-103 18-48 (338)
460 2d5c_A AROE, shikimate 5-dehyd 82.2 1.3 4.6E-05 42.7 5.1 31 73-103 118-148 (263)
461 3fbt_A Chorismate mutase and s 82.2 1.2 4.1E-05 43.6 4.7 33 71-103 122-155 (282)
462 3d4o_A Dipicolinate synthase s 82.2 1.3 4.5E-05 43.6 5.1 33 71-103 155-187 (293)
463 3gt0_A Pyrroline-5-carboxylate 82.1 1.3 4.5E-05 42.2 5.0 31 73-103 4-38 (247)
464 1i36_A Conserved hypothetical 82.1 1.1 3.9E-05 43.1 4.5 30 73-102 2-31 (264)
465 2izz_A Pyrroline-5-carboxylate 82.1 1.3 4.5E-05 44.2 5.1 32 72-103 23-58 (322)
466 3o8q_A Shikimate 5-dehydrogena 81.9 1.3 4.3E-05 43.4 4.8 33 71-103 126-159 (281)
467 2q3e_A UDP-glucose 6-dehydroge 81.9 0.93 3.2E-05 48.0 4.1 32 72-103 6-39 (467)
468 3vku_A L-LDH, L-lactate dehydr 81.7 1.3 4.6E-05 44.2 5.0 34 70-103 8-43 (326)
469 1lu9_A Methylene tetrahydromet 81.7 1.4 4.6E-05 43.3 5.0 32 72-103 120-152 (287)
470 4gx0_A TRKA domain protein; me 81.5 1.3 4.4E-05 48.1 5.2 33 72-104 349-381 (565)
471 1b0a_A Protein (fold bifunctio 81.4 1.3 4.5E-05 43.0 4.6 34 70-103 158-192 (288)
472 4gbj_A 6-phosphogluconate dehy 81.3 1.2 4.1E-05 44.0 4.4 33 72-104 6-38 (297)
473 2d4a_B Malate dehydrogenase; a 81.2 1.2 4.3E-05 44.1 4.5 30 74-103 2-32 (308)
474 1b37_A Protein (polyamine oxid 81.2 1.3 4.4E-05 46.8 5.0 56 233-296 207-270 (472)
475 2dkn_A 3-alpha-hydroxysteroid 81.0 1.6 5.5E-05 41.4 5.1 32 73-104 3-35 (255)
476 3t4e_A Quinate/shikimate dehyd 80.9 1.6 5.3E-05 43.4 5.0 33 71-103 148-181 (312)
477 3ngx_A Bifunctional protein fo 80.7 1.5 5.2E-05 42.3 4.7 33 70-102 149-182 (276)
478 3d3w_A L-xylulose reductase; u 80.7 1.9 6.6E-05 40.7 5.6 32 72-103 8-40 (244)
479 1y8q_A Ubiquitin-like 1 activa 80.6 1.7 5.7E-05 43.9 5.3 36 71-106 36-72 (346)
480 1tt5_B Ubiquitin-activating en 80.5 1.6 5.5E-05 45.4 5.2 35 71-105 40-75 (434)
481 4a26_A Putative C-1-tetrahydro 80.5 1.5 5.1E-05 43.0 4.6 34 70-103 164-198 (300)
482 3ce6_A Adenosylhomocysteinase; 80.3 1.6 5.5E-05 46.2 5.2 33 71-103 274-306 (494)
483 1cyd_A Carbonyl reductase; sho 80.0 2.2 7.4E-05 40.3 5.7 32 72-103 8-40 (244)
484 3p2o_A Bifunctional protein fo 79.5 1.7 5.9E-05 42.2 4.7 34 70-103 159-193 (285)
485 3r6d_A NAD-dependent epimerase 79.5 2.4 8.3E-05 39.3 5.8 31 73-103 7-39 (221)
486 3dhn_A NAD-dependent epimerase 79.5 1.5 5E-05 41.0 4.2 33 72-104 5-38 (227)
487 1npy_A Hypothetical shikimate 79.5 1.7 5.8E-05 42.2 4.7 32 72-103 120-152 (271)
488 3hyw_A Sulfide-quinone reducta 79.5 3.3 0.00011 43.1 7.3 32 73-104 4-37 (430)
489 4a5o_A Bifunctional protein fo 79.4 1.8 6E-05 42.1 4.7 33 70-102 160-193 (286)
490 2pd4_A Enoyl-[acyl-carrier-pro 79.2 1.6 5.6E-05 42.2 4.6 32 73-104 8-42 (275)
491 2dbq_A Glyoxylate reductase; D 78.8 2.1 7.2E-05 43.0 5.3 33 72-104 151-183 (334)
492 1yb4_A Tartronic semialdehyde 78.5 1.4 4.8E-05 43.2 3.9 29 73-101 5-33 (295)
493 2ivd_A PPO, PPOX, protoporphyr 78.5 2 7E-05 45.2 5.4 57 232-296 238-294 (478)
494 3gvp_A Adenosylhomocysteinase 78.4 2.1 7.2E-05 44.2 5.2 32 72-103 221-252 (435)
495 3l07_A Bifunctional protein fo 78.4 2 6.8E-05 41.8 4.7 33 70-102 160-193 (285)
496 3ruf_A WBGU; rossmann fold, UD 78.3 2.3 7.9E-05 42.6 5.5 35 70-104 24-59 (351)
497 2ahr_A Putative pyrroline carb 78.2 1.7 5.8E-05 41.7 4.3 32 72-103 4-35 (259)
498 3oig_A Enoyl-[acyl-carrier-pro 78.0 2.6 8.7E-05 40.5 5.6 32 72-103 8-42 (266)
499 2qrj_A Saccharopine dehydrogen 78.0 2.2 7.7E-05 43.5 5.2 35 70-104 213-251 (394)
500 3k31_A Enoyl-(acyl-carrier-pro 77.9 2 6.8E-05 42.2 4.8 32 72-103 31-65 (296)
No 1
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=100.00 E-value=4.2e-75 Score=643.69 Aligned_cols=531 Identities=31% Similarity=0.461 Sum_probs=413.5
Q ss_pred CchHHHHHHHHhccCCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCCCCcCCCCCcccchhhhhhhhhccCCc
Q 006891 54 PSRVVQESALIAANNSNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDY 133 (627)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~g~S~~~~~~i~~g~~~~~~~~~~~~~ 133 (627)
..|...+..+. +.+|||||||||++|+++|++|+++|++|+||||+++++|+|++|++++|+|++|+..
T Consensus 5 ~~r~~~~~~m~----~~~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~~~GtS~~ss~lihgG~ryl~~------- 73 (561)
T 3da1_A 5 KKRDKCIGEMS----EKQLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDFASGTSSRSTKLVHGGLRYLKQ------- 73 (561)
T ss_dssp TCHHHHHHHHT----TSCEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSSTTCSGGGSSCCEECC--------------
T ss_pred hHHHHHHHhcc----CCCCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCCCCCcccCCcCccccchHHHHh-------
Confidence 45666677765 6789999999999999999999999999999999999999999999999999999764
Q ss_pred chHHHHHHHHHHHHHHHHHCCCCcccCCCccccCCch--hHHHHHHHHHHHHHhhcCCCCCCccccCHHHHHhhCCcccc
Q 006891 134 GQLKLVFHALEERKQVIRNAPHLSNALPCMTPCFDWF--EVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAM 211 (627)
Q Consensus 134 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~~~~~g~~~~~~l~~~~g~~~~~~l~~~~~~~~~p~l~~ 211 (627)
..+.++.+.+.++..+.+..|+++++.++++|.+... .......+..+++.+......+..++++..+....+|.+
T Consensus 74 ~~~~l~~e~~~e~~~l~~~ap~l~~~~~~~~p~~~~~~~~~~~~~~g~~~~d~l~~~~~~~~~~~l~~~~~~~~~P~l-- 151 (561)
T 3da1_A 74 FEIKLVAEVGKERAIVYENAPHVTTPEWMLLPIFKDGTFGKFSTSLGLKVYDYLADVRKDERRYMLNEKQTLEKEPLL-- 151 (561)
T ss_dssp --------CHHHHHHHHHHCTTTCEEEEEEEEECC---------------------------CEEECHHHHHHHCTTS--
T ss_pred cCHHHHHHHHHHHHHHHHhCchhccccceeEeecCCccHHHHHHHhHHHHHHHhhcccCCCCcEEECHHHHHHhCccC--
Confidence 2456677788888888899999999998888876532 223334566677766543334568899999999999998
Q ss_pred ccccCCceEEEEecCceechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEec
Q 006891 212 KAKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNA 291 (627)
Q Consensus 212 ~~~~~~~~g~~~~~~g~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~A 291 (627)
....+.+++.+.++++|+.+++..+++.+.++|++|+++++|++|..++ + +++||++.|..+|+...++||.||||
T Consensus 152 --~~~~~~gg~~~~dg~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~-g-~v~gV~~~d~~tg~~~~i~A~~VV~A 227 (561)
T 3da1_A 152 --RKENLKGGGIYVEYRTDDARLTLEIMKEAVARGAVALNYMKVESFIYDQ-G-KVVGVVAKDRLTDTTHTIYAKKVVNA 227 (561)
T ss_dssp --CCTTCCEEEEEEEEECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEET-T-EEEEEEEEETTTCCEEEEEEEEEEEC
T ss_pred --ChhhceeEEEecCceEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcC-C-eEEEEEEEEcCCCceEEEECCEEEEC
Confidence 5566788888889999999999999999999999999999999999976 5 89999998866777789999999999
Q ss_pred cCCChHHHhhhhcCCCCCceecCcceEEEecCCCCCCCcceecccCCCCcEEEEEecCCcEEEecCCCCC-CCCCCCCCC
Q 006891 292 AGPFCDSVRKLADQNVQPMICPSSGVHIVLPDYYSPEGMGLIVPKTKDGRVVFMLPWLGRTVAGTTDSDT-VITLLPEPH 370 (627)
Q Consensus 292 tG~~s~~l~~~~g~~~~~~i~p~kG~~lv~~~~~~~~~~~~~~~~~~dg~~~~~~P~~g~~~iG~t~~~~-~~~~~~~~~ 370 (627)
+|+|++.|++++|.....++.|.||+|++++....+....++++.+.+|+.+|++|++|+++||+|+++. +++.++.++
T Consensus 228 aG~~s~~l~~~~g~~~~~~v~p~kG~~lvl~~~~~~~~~~~~~~~~~dgr~v~~iP~~g~~~iGtT~~~~~~~~~~~~~t 307 (561)
T 3da1_A 228 AGPWVDTLREKDRSKHGKYLKLSKGVHLVVDQSRFPLRQAVYFDTESDGRMIFAIPREGKTYIGTTDTFYDKDIASPRMT 307 (561)
T ss_dssp CGGGHHHHHHTTTCCCSSEEEEEEEEEEEEEGGGSCCSSEEEECCSSSCCCEEEEEETTEEEECCCCEEECSCTTCCCCC
T ss_pred CCcchHHHHHhcCCCCCceEEeccEEEEEECCccCCCceEEEeccCCCCcEEEEEecCCCEEEcCCCCccCCCcCCCCCC
Confidence 9999999999998765568999999999998655555555666533689999999999999999999763 345678899
Q ss_pred HHHHHHHHHHHhhhcccCCC--ccceeeeeeeeeccccCCCCCCCCCCcccceeeecCCCeEEEecChhhhHHHHHHHHH
Q 006891 371 EDEIQFILDAISDYLNVKVR--RTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCEDFPGLVTITGGKWTTYRSMAEDAV 448 (627)
Q Consensus 371 ~~~~~~ll~~~~~~~~~~l~--~~~i~~~~aG~Rp~~~d~~~~~~~~~~r~~~i~~~~~gl~~~~Gg~~t~~~~~Ae~~~ 448 (627)
+++++++++.++++| |.+. ..+|++.|+|+||++.|+ ..+++.++|+|.|..+.+|+++++|||||+||.|||+++
T Consensus 308 ~~~i~~ll~~~~~~~-P~l~~~~~~v~~~~aGlRPl~~~~-~~~~~~~sR~~~i~~~~~gli~i~Ggk~Tt~r~mAe~~~ 385 (561)
T 3da1_A 308 VEDRDYILAAANYMF-PSLRLTADDVESSWAGLRPLIHEE-GKKASEISRKDEIFFSDSGLISIAGGKLTGYRKMAERTV 385 (561)
T ss_dssp HHHHHHHHHHHHHHC-TTCCCCTTTEEEEEEEEEEEEEC------------CCEEECSSCCEEECCCCSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-CCCCCChhhEEEEeEEeccccCCC-CCCccccccceEEEecCCCeEEEeCChhhhHHHHHHHHH
Confidence 999999999999999 7665 889999999999999774 356788899998887778999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCcccccccCCCC-CCcchHHHHHHHHhhhhhccCCCCCCCCCCHHHHHHHHHhhCCcHHHHHHHH
Q 006891 449 NAAIKSGKLNPSNGCLTQNLRLVGGDG-WDPSSFTVLAQQYVRMKRTYGGKFVPGVMDTAVAKHLSHAYGIMAEQVAIIA 527 (627)
Q Consensus 449 ~~~~~~~~~~~~~~~~t~~~~l~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~yG~~~~~v~~~~ 527 (627)
|++.+.+++ ..+|+|+.+||+|+.. +.... ..+..+...... ...++.+.++||.++||+++..|++++
T Consensus 386 d~~~~~~~~--~~~~~t~~~~l~g~~~~~~~~~-~~~~~~~~~~~~-------~~~~~~~~~~~l~~~yG~~~~~~~~~~ 455 (561)
T 3da1_A 386 DAVAQGLNV--NEPCTTAAIRLSGGLAEGAQGF-PRFLDEASRKGA-------KLGFDADEVRRLAKLYGSNVDHVLNYA 455 (561)
T ss_dssp HHHHHHHTC--CCCCCTTSCCCTTCCTTCSTTH-HHHHHHHHHHHH-------TTTCCHHHHHHHHHHHGGGHHHHHHHH
T ss_pred HHHHHhcCC--CCCCCcCCcccCCccccccccH-HHHHHHHHHHhh-------ccCCCHHHHHHHHHHhcchHHHHHhhc
Confidence 999998653 4799999999999872 22211 111111111111 123799999999999999999999987
Q ss_pred hccCCCCccccCCCc-cHHHHHHHHHhcCCCChhHHHHhhcccccCChHHHhhhHHHHHHHHHHHcCCCHHHHHHHHHHH
Q 006891 528 QNEGLGKRLAHGYPF-LEAEVAYCARNEYCESAVDFVARRCRLAFLDTDAAGRALPRIIEIMATEHKWDKSRRKQELQKA 606 (627)
Q Consensus 528 ~~~~~~~~~~~~~~~-~~aei~~a~~~e~~~~~~D~l~RRtr~~~~~~~~~~~~~~~v~~~~~~~l~w~~~~~~~e~~~~ 606 (627)
.+..... .++..++ +++||+||+++|||+|++|+|.||||++|++.+.+..++++|+++|+++||||.+++++|++++
T Consensus 456 ~~~~~~~-~~~~~~~~~~ae~~~~~~~e~a~~~~D~l~rRt~~~~~~~~~~~~~~~~~~~~~~~~l~w~~~~~~~~~~~~ 534 (561)
T 3da1_A 456 YEGKEEA-EHYGLPALLLGQLQYGVEQEMVATPLDFFVRRTGALFFNISLVHQWKEAVLRWMAEEFSWTEEEKTRFQNEL 534 (561)
T ss_dssp HHTHHHH-HHTTSCHHHHHHHHHHHHHSCCCSHHHHHHTTSCHHHHCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred ccccccc-cCCCCCcchHHHHHHHHHhhccCCHHHHHHHhhhhhhcCHHHHHHHHHHHHHHHHHHHCcCHHHHHHHHHHH
Confidence 6542112 2678888 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhc
Q 006891 607 KEFLETFK 614 (627)
Q Consensus 607 ~~~~~~~~ 614 (627)
..++..+.
T Consensus 535 ~~~~~~~~ 542 (561)
T 3da1_A 535 ETELKMAV 542 (561)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHcC
Confidence 99998874
No 2
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=100.00 E-value=5.3e-70 Score=604.15 Aligned_cols=534 Identities=28% Similarity=0.447 Sum_probs=424.6
Q ss_pred CCchHHHHHHHHhccCCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCCCCcCCCCCcccchhhhhhhhhccCC
Q 006891 53 VPSRVVQESALIAANNSNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLD 132 (627)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~g~S~~~~~~i~~g~~~~~~~~~~~~ 132 (627)
++.|...+..+. ..++||+|||||++|+++|++|+++|++|+|||++++++|+|++|+|++|+|++|+..
T Consensus 18 ~~~r~~~~~~m~----~~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~GtS~~s~gli~~g~ryl~~------ 87 (571)
T 2rgh_A 18 NKTRQDSIQKMQ----QEELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEGTSSRSTKLVHGGIRYLKT------ 87 (571)
T ss_dssp HHHHHHHHHHHH----HSCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSGGGSSCSEECCCGGGGGG------
T ss_pred ccCHHHHHHhcc----cCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccccccccccchhhc------
Confidence 445667777765 4679999999999999999999999999999999999999999999999999998764
Q ss_pred cchHHHHHHHHHHHHHHHHHCCCCcccCCCccccCCc-----hhHHHHHHHHHHHHHhhc--CCCCCCccccCHHHHHhh
Q 006891 133 YGQLKLVFHALEERKQVIRNAPHLSNALPCMTPCFDW-----FEVVYYWVGLKMYDLVAG--RHLLHLSRYYSAQESAEL 205 (627)
Q Consensus 133 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~-----~~~~~~~~g~~~~~~l~~--~~g~~~~~~l~~~~~~~~ 205 (627)
..+.++.+.+.++..+....+++..+.++++|.+.. +.......+..+++++.. ..+. ..+++++.++.+.
T Consensus 88 -~~~~l~~~~~~e~~~l~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~l~~~e~~~~ 165 (571)
T 2rgh_A 88 -FDVEVVADTVGERAVVQGIAPHIPKPDPMLLPIYEDEGATTFNMFSVKVAMDLYDKLANVTGTKY-ENYTLTPEEVLER 165 (571)
T ss_dssp -TCHHHHHHHHHHHHHHHHHCTTSSEECCEEEEEESSSSSCSCCHHHHHHHHHHHHHHHTCSSSTT-CCEEECHHHHHHH
T ss_pred -cChHHHHHHHHHHHHHHHhCcccccccCceEEeecccccccccHHHHHHHHHHHHHHhhhhccCC-CcEEECHHHHHHh
Confidence 246677778888777778889988888877775432 334445566677777753 2343 4789999999999
Q ss_pred CCccccccccCCceEEEEecCceechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEc
Q 006891 206 FPTLAMKAKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYA 285 (627)
Q Consensus 206 ~p~l~~~~~~~~~~g~~~~~~g~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A 285 (627)
+|.+ +.+.+.+++.+.+++++|.+++..+++.+.++|++|+++++|++|..++ + +|+||++.|..+|+..+++|
T Consensus 166 ~P~l----~~~~~~gg~~~~dg~v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~-~-~v~gV~~~d~~tg~~~~i~A 239 (571)
T 2rgh_A 166 EPFL----KKEGLKGAGVYLDFRNNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEG-D-QIVGVKARDLLTDEVIEIKA 239 (571)
T ss_dssp CTTS----CCTTEEEEEEECCEECCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEET-T-EEEEEEEEETTTCCEEEEEB
T ss_pred CcCC----chhhceEEEEecCCeEchHHHHHHHHHHHHHcCCeEEeccEEEEEEEeC-C-EEEEEEEEEcCCCCEEEEEc
Confidence 9998 5566778888888999999999999999999999999999999999876 5 89999998755676568999
Q ss_pred CeEEeccCCChHHHhhhhcCCCC-CceecCcceEEEecCCCCCCCcceeccc-CCCCcEEEEEecCCcEEEecCCCCCC-
Q 006891 286 KVVVNAAGPFCDSVRKLADQNVQ-PMICPSSGVHIVLPDYYSPEGMGLIVPK-TKDGRVVFMLPWLGRTVAGTTDSDTV- 362 (627)
Q Consensus 286 ~~VV~AtG~~s~~l~~~~g~~~~-~~i~p~kG~~lv~~~~~~~~~~~~~~~~-~~dg~~~~~~P~~g~~~iG~t~~~~~- 362 (627)
|.||||||+|++.|.++.+.... .++.|.||+|++++....+....++++. ..|++.+|++|+++.++||+|+++.+
T Consensus 240 ~~VV~AaG~ws~~l~~~~g~~~~~~~i~p~rG~~l~~~~~~~~~~~~~~~~~~~~dgr~~~~~P~~~~~~iG~t~~~~~~ 319 (571)
T 2rgh_A 240 KLVINTSGPWVDKVRNLNFTRPVSPKMRPTKGIHLVVDAKKLPVPQPTYFDTGKQDGRMVFAIPRENKTYFGTTDTDYQG 319 (571)
T ss_dssp SCEEECCGGGHHHHHTTCCSSCCCCCBCCEEEEEEEEEGGGSCCSSCEEEECSSSSSCEEEEEEETTEEEECCCCEECCS
T ss_pred CEEEECCChhHHHHHHhhccCccCceeeccceEEEEeccccCCCCcEEEEeccCCCCcEEEEEEcCCeEEEcCCCcCCCC
Confidence 99999999999999988776533 4699999999999754333333455542 26889999999999999999987542
Q ss_pred CCCCCCCCHHHHHHHHHHHhhhcccC--CCccceeeeeeeeeccccCCCCCCCCCCcccceeeecCCCeEEEecChhhhH
Q 006891 363 ITLLPEPHEDEIQFILDAISDYLNVK--VRRTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCEDFPGLVTITGGKWTTY 440 (627)
Q Consensus 363 ~~~~~~~~~~~~~~ll~~~~~~~~~~--l~~~~i~~~~aG~Rp~~~d~~~~~~~~~~r~~~i~~~~~gl~~~~Gg~~t~~ 440 (627)
++.++.+++++++++++.+.++| |. +...+|++.|+|+||+++|+ ..++..++|+|+|..+.+|+++++|||||++
T Consensus 320 ~~~~~~~~~~~~~~ll~~~~~~~-P~~~l~~~~v~~~waG~Rp~~~d~-~~~~~~~~r~~~i~~~~~gl~~v~GGk~Tt~ 397 (571)
T 2rgh_A 320 DFTDPKVTQEDVDYLLDVINHRY-PEANITLADIEASWAGLRPLLIGN-SGSPSTISRGSSLEREPDGLLTLSGGKITDY 397 (571)
T ss_dssp CSSSCCCCHHHHHHHHHHHHHHS-TTTCCCGGGCCEEEEEEECCBCC------------EEEEECTTSCEEEEECCGGGH
T ss_pred CcCCCCCCHHHHHHHHHHHHHhc-CccCCchhceeEEeEEeeeccCCC-CCCcccCCCCcEEecCCCCeEEEeCcchhhH
Confidence 34577889999999999999999 65 57789999999999999874 2346778899999877789999999999999
Q ss_pred HHHHHHHHHHHHHcC----CCCCCCCCCcccccccCCCCCCcchHHHHHHHHhhhhhccCCCCCCCCCCHHHHHHHHHhh
Q 006891 441 RSMAEDAVNAAIKSG----KLNPSNGCLTQNLRLVGGDGWDPSSFTVLAQQYVRMKRTYGGKFVPGVMDTAVAKHLSHAY 516 (627)
Q Consensus 441 ~~~Ae~~~~~~~~~~----~~~~~~~~~t~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~y 516 (627)
|.|||.+++++.+.+ ++ +..+|+|+.+||+|+....... ..+...+...... ..++.+.++||.++|
T Consensus 398 r~~Ae~~~~~i~~~l~~~~~~-~~~~~~t~~~~l~g~~~~~~~~-~~~~~~~~~~~~~-------~~~~~~~~~~l~~~y 468 (571)
T 2rgh_A 398 RKMAEGALRLIRQLLKEEYGI-ETKEIDSKKYQISGGNFDPTKL-EETVTELAKEGVA-------AGLEEEDATYIADFY 468 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC-CCCCCCTTTCCCTTCCSCTTCH-HHHHHHHHHHHHH-------TTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccCC-CCCCCCcCCCCCCCCCCCcchH-HHHHHHHHHhccc-------cCCCHHHHHHHHhcc
Confidence 999999999999885 32 2478999999999986332221 1111111000011 127899999999999
Q ss_pred CCcHHHHHHHHhccCCCCccccCCC-ccHHHHHHHHHhcCCCChhHHHHhhcccccCChHHHhhhHHHHHHHHHHHcCCC
Q 006891 517 GIMAEQVAIIAQNEGLGKRLAHGYP-FLEAEVAYCARNEYCESAVDFVARRCRLAFLDTDAAGRALPRIIEIMATEHKWD 595 (627)
Q Consensus 517 G~~~~~v~~~~~~~~~~~~~~~~~~-~~~aei~~a~~~e~~~~~~D~l~RRtr~~~~~~~~~~~~~~~v~~~~~~~l~w~ 595 (627)
|+++..|++++.+... ++..+ .+++||+|+|++|||+|+.|+|+||||++|.+.+.+..+.++|+++|+++|||+
T Consensus 469 G~~~~~~~~~~~~~~~----~~~~~~~~~aev~~~~~~e~a~~~~D~l~RRt~~~~~~~~~~~~~~~~~~~~~~~~l~w~ 544 (571)
T 2rgh_A 469 GTNARRIFELAKEMAP----YPGLSLAESARLRYGLEEEMVLAPGDYLIRRTNHLLFERDQLDEIKQPVIDAIAEYFGWT 544 (571)
T ss_dssp GGGHHHHHHHHHTCCC----CTTSCHHHHHHHHHHHHHSCCCSHHHHHHTTSSHHHHCGGGHHHHHHHHHHHHHHHHTCC
T ss_pred cchHHHHHhccccccc----ccCCCcccHHHHHHHHhhccCCCHHHHHHHhhhccccCccchHHHHHHHHHHHHHHhCCC
Confidence 9999999988764311 11122 267999999999999999999999999999887788899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCc
Q 006891 596 KSRRKQELQKAKEFLETFKSSKNK 619 (627)
Q Consensus 596 ~~~~~~e~~~~~~~~~~~~~~~~~ 619 (627)
.+++++|++.+..++..+.....+
T Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~ 568 (571)
T 2rgh_A 545 EEEKAQQTKRLEALIAESDLRELK 568 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTTT
T ss_pred HHHHHHHHHHHHHHHHHccchhhh
Confidence 999999999999999887655544
No 3
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=100.00 E-value=3.9e-64 Score=550.68 Aligned_cols=480 Identities=29% Similarity=0.419 Sum_probs=389.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCCCCcCCCCCcccchhhhhhhhhccCCcchHHHHHHHHHHHHHHH
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQVI 150 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~g~S~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (627)
++||+|||||++|+++|++|+++|++|+||||+++++|+|++|++++|+|.+|+.. ..+.++.+.+.++..+.
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~~~gtS~~s~gli~~g~~~~~~-------~~~~l~~~~~~~~~~l~ 75 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEH-------YEFRLVSEALAEREVLL 75 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSGGGSSCCEECCCGGGGGG-------TCHHHHHHHHHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCCCCCccccccccccccchhhhh-------chHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999988764 25667778888888787
Q ss_pred HHCCCCcccCCCccccCC-chhHHHHHHHHHHHHHhhcCCCCCCccccCHHHHHhhC--CccccccccCCceEEEEecCc
Q 006891 151 RNAPHLSNALPCMTPCFD-WFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELF--PTLAMKAKDRSLKGAVVYYDG 227 (627)
Q Consensus 151 ~~~~~~~~~~~~~~p~~~-~~~~~~~~~g~~~~~~l~~~~g~~~~~~l~~~~~~~~~--p~l~~~~~~~~~~g~~~~~~g 227 (627)
+..+++++++.+.+|... .+.......+..+++.+. ..+++++++..+.+ |.+ .. .+.+++.+.++
T Consensus 76 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~~~~~~~~~P~l----~~-~~~~~~~~~~g 144 (501)
T 2qcu_A 76 KMAPHIAFPMRFRLPHRPHLRPAWMIRIGLFMYDHLG------KRTSLPGSTGLRFGANSVL----KP-EIKRGFEYSDC 144 (501)
T ss_dssp HHCTTTEEEEEEEEECCTTTSCHHHHHHHHHHHHSSS------CCSSSCCCEEEECCTTSSB----CT-TCCEEEEEEEE
T ss_pred HhCCccccccCeEeccCcccchHHHHHHHHHHHHhcC------CcEEECHHHHHHhhcCCCc----ch-hceEEEEeeCC
Confidence 889999888776666553 223333444445555432 36777777766777 877 33 36678888899
Q ss_pred eechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhh-hcCC
Q 006891 228 QMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKL-ADQN 306 (627)
Q Consensus 228 ~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~-~g~~ 306 (627)
+++|.+++..+++.+.++|++++++++|++|..++ ++++|++.|..+|+..+++||.||||+|+|++.+.+. ++..
T Consensus 145 ~v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~---~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~~~ 221 (501)
T 2qcu_A 145 WVDDARLVLANAQMVVRKGGEVLTRTRATSARREN---GLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLP 221 (501)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEET---TEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTCCC
T ss_pred EEcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC---CEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhccCC
Confidence 99999999999999999999999999999999865 4778888764456656899999999999999999884 4432
Q ss_pred CCCceecCcceEEEecCCCCCCCcceecccCCCCcEEEEEecC-CcEEEecCCCCCC-CCCCCCCCHHHHHHHHHHHhhh
Q 006891 307 VQPMICPSSGVHIVLPDYYSPEGMGLIVPKTKDGRVVFMLPWL-GRTVAGTTDSDTV-ITLLPEPHEDEIQFILDAISDY 384 (627)
Q Consensus 307 ~~~~i~p~kG~~lv~~~~~~~~~~~~~~~~~~dg~~~~~~P~~-g~~~iG~t~~~~~-~~~~~~~~~~~~~~ll~~~~~~ 384 (627)
...++.|.||+|++++... +....++++ +.+++.+|++|+. |.+++|+|+.+.+ ++.+..+++++++++++.++++
T Consensus 222 ~~~~i~p~rG~~~~~~~~~-~~~~~~~~~-~~dg~~~~~~P~~~g~~~iG~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 299 (501)
T 2qcu_A 222 SPYGIRLIKGSHIVVPRVH-TQKQAYILQ-NEDKRIVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEESEINYLLNVYNTH 299 (501)
T ss_dssp CSSCBCCEEEEEEEEECSS-SCSCEEEEE-CTTSCEEEEEEETTTEEEEECCCEECCSCGGGCCCCHHHHHHHHHHHHHH
T ss_pred cccccccceeEEEEECCCC-CCceEEEee-cCCCCEEEEEEcCCCcEEEcCCCCCCCCCcCCCCCCHHHHHHHHHHHHHh
Confidence 2246999999999998543 333445555 5688999999987 7889999987543 3456788999999999999999
Q ss_pred ccc-CCCccceeeeeeeeeccccCCCCCCCCCCcccceee--ec--CCCeEEEecChhhhHHHHHHHHHHHHHHcCCCCC
Q 006891 385 LNV-KVRRTDVLSAWSGIRPLAMDPSAKNTESISRDHVVC--ED--FPGLVTITGGKWTTYRSMAEDAVNAAIKSGKLNP 459 (627)
Q Consensus 385 ~~~-~l~~~~i~~~~aG~Rp~~~d~~~~~~~~~~r~~~i~--~~--~~gl~~~~Gg~~t~~~~~Ae~~~~~~~~~~~~~~ 459 (627)
| | .+...+|++.|+|+||+++|+ .+..+.++++|+|. .. .+|+++++|||||++|.|||++++++.+.+ .+
T Consensus 300 ~-p~~l~~~~v~~~~aG~Rp~~~d~-~p~~~~~~~~~~i~~~~~~~~~gl~~i~Gg~~t~~~~~Ae~~~~~~~~~~--~~ 375 (501)
T 2qcu_A 300 F-KKQLSRDDIVWTYSGVRPLCDDE-SDSPQAITRDYTLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEKLTPYY--QG 375 (501)
T ss_dssp B-SSCCCGGGCCEEEEEEECCBCCC-CSSGGGSCCCCEEEEEEETTEEEEEEEECCCGGGHHHHHHHHHHHHGGGS--TT
T ss_pred c-CCCCCcccEEEEEEEEeeecCCC-CCccccCcCceEEEecccCCCCCeEEEeCccccchHHHHHHHHHHHHHhh--cc
Confidence 9 7 788899999999999999874 34466778899887 42 368999999999999999999999999886 34
Q ss_pred CCCCCcccccccCCCCCCcch--HHHHHHHHhhhhhccCCCCCCCCCCHHHHHHHHHhhCCcHHHHHHHHhcc-CCCCcc
Q 006891 460 SNGCLTQNLRLVGGDGWDPSS--FTVLAQQYVRMKRTYGGKFVPGVMDTAVAKHLSHAYGIMAEQVAIIAQNE-GLGKRL 536 (627)
Q Consensus 460 ~~~~~t~~~~l~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~yG~~~~~v~~~~~~~-~~~~~~ 536 (627)
.++|.|+..||+|+..+.... ...+...+. .++.+.++||.++||+++..|++++.++ ++++.
T Consensus 376 ~~~~~t~~~~l~g~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~l~~~yg~~~~~~~~~~~~~~~~~~~- 441 (501)
T 2qcu_A 376 IGPAWTKESVLPGGAIEGDRDDYAARLRRRYP-------------FLTESLARHYARTYGSNSELLLGNAGTVSDLGED- 441 (501)
T ss_dssp CCCCCGGGCCCTTCCSSSTTTTHHHHHHHHCT-------------TSCHHHHHHHHHHTGGGHHHHHTTCCSGGGGCCB-
T ss_pred cCCCCcCCccCcCCCccchHHHHHHHHHHhcc-------------CCCHHHHHHHHhhhchhHHHHHHhcccChhhccc-
Confidence 678999999999998654321 122222221 2788999999999999999999876543 56655
Q ss_pred ccCCCccHHHHHHHHHhcCCCChhHHHHhhcccccCChHHHhhhHHHHHHHHHHHcCCC
Q 006891 537 AHGYPFLEAEVAYCARNEYCESAVDFVARRCRLAFLDTDAAGRALPRIIEIMATEHKWD 595 (627)
Q Consensus 537 ~~~~~~~~aei~~a~~~e~~~~~~D~l~RRtr~~~~~~~~~~~~~~~v~~~~~~~l~w~ 595 (627)
.|++|+++||+|||++|+++|+.|+|+||||++|++ +.+|.++|+++|+++++-+
T Consensus 442 -~~~~~~~~ei~~~~~~e~~~~~~d~l~rRtr~~~~~---~~~~~~~v~~~~~~~~~~~ 496 (501)
T 2qcu_A 442 -FGHEFYEAELKYLVDHEWVRRADDALWRRTKQGMWL---NADQQSRVSQWLVEYTQQR 496 (501)
T ss_dssp -CSTTCBHHHHHHHHHHSCCCSHHHHHHTTCCGGGTC---CHHHHHHHHHHHHHHHHSS
T ss_pred -cCCcccHHHHHHHHHhcCCCCHHHHHHHHHhcchhh---hHHHHHHHHHHHHHHhccc
Confidence 588999999999999999999999999999999987 6799999999999998754
No 4
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=100.00 E-value=1.1e-34 Score=304.94 Aligned_cols=353 Identities=19% Similarity=0.193 Sum_probs=246.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCC-CCCCCCcCCCCCcccchhhhhhhhhccCCcchHHHHHHHHHHHHH
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERE-DFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~-~~~~g~S~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 148 (627)
.++||+|||||++|+++|++|+++|++|+||||+ .++.++|+++++++|.+..+.... ....+..+.......
T Consensus 3 ~~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~~~~~~s~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 76 (369)
T 3dme_A 3 TDIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIGTGTSSRNSEVIHAGIYYPADS------LKARLCVRGKHLLYE 76 (369)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSCSTTSSSCCEECCCCSSCTTC------HHHHHHHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCccCcCCccccccCccCCCCC------HhHHHHHHHHHHHHH
Confidence 3589999999999999999999999999999999 588999999999999887653321 011111111111111
Q ss_pred HHHHCCCCcccCCCccccCCchhHHHHHHHHHHHHHhhcCCCCCCccccCHHHHHhhCCccccccccCCceEEEEecCce
Q 006891 149 VIRNAPHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAKDRSLKGAVVYYDGQ 228 (627)
Q Consensus 149 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~l~~~~~~~~~p~l~~~~~~~~~~g~~~~~~g~ 228 (627)
+......-....+.+............ ....... ...+++..++++..++...+|.+ ....+.+.+.++.
T Consensus 77 ~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~-~~~g~~~~~~~~~~~~~~~~p~~------~~~~~~~~~~~~~ 146 (369)
T 3dme_A 77 YCAARGVPHQRLGKLIVATSDAEASQL---DSIARRA-GANGVDDLQHIDGAAARRLEPAL------HCTAALVSPSTGI 146 (369)
T ss_dssp HHHHHTCCEECCCEEEEECSHHHHTTH---HHHHHHH-HHTTCCCCEEEEHHHHHHHCTTC------CCSEEEEETTCEE
T ss_pred HHHHcCCCcccCCEEEEecCHHHHHHH---HHHHHHH-HHcCCCceeecCHHHHHHhCCCc------eeeeeeECCCCEE
Confidence 111111001111111111111111000 1122222 24566557889999999999977 3344556677899
Q ss_pred echHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhh-cCCC
Q 006891 229 MNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLA-DQNV 307 (627)
Q Consensus 229 ~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~-g~~~ 307 (627)
+++..++..|.+.++++|++|+++++|++|..++++ . +.|.+ .+|+..+++||.||+|+|.|+..|.+++ |.+.
T Consensus 147 ~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~-~-~~v~~---~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g~~~ 221 (369)
T 3dme_A 147 VDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEG-G-FELDF---GGAEPMTLSCRVLINAAGLHAPGLARRIEGIPR 221 (369)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTS-S-EEEEE---CTTSCEEEEEEEEEECCGGGHHHHHHTEETSCG
T ss_pred ECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCc-e-EEEEE---CCCceeEEEeCEEEECCCcchHHHHHHhcCCCc
Confidence 999999999999999999999999999999997644 2 33554 3454468999999999999999999988 7641
Q ss_pred --CCceecCcceEEEecCCCCCCCcc-eecccCCCCcEEE-EEecCCcEEEecCCCCCCCCCCCCCCHHHHHHHHHHHhh
Q 006891 308 --QPMICPSSGVHIVLPDYYSPEGMG-LIVPKTKDGRVVF-MLPWLGRTVAGTTDSDTVITLLPEPHEDEIQFILDAISD 383 (627)
Q Consensus 308 --~~~i~p~kG~~lv~~~~~~~~~~~-~~~~~~~dg~~~~-~~P~~g~~~iG~t~~~~~~~~~~~~~~~~~~~ll~~~~~ 383 (627)
.+++.|.||+++.++.. .+.... +..| ..++..++ ..+++|.+++|+|.+..+ ..+..++++.++.+++.+.+
T Consensus 222 ~~~~~i~p~rG~~~~~~~~-~~~~~~~~~~p-~~~~~~~~~~~~~~g~~~iG~t~e~~~-~~~~~~~~~~~~~l~~~~~~ 298 (369)
T 3dme_A 222 DSIPPEYLCKGSYFTLAGR-APFSRLIYPVP-QHAGLGVHLTLDLGGQAKFGPDTEWIA-TEDYTLDPRRADVFYAAVRS 298 (369)
T ss_dssp GGSCCCEEEEEEEEECSSS-CSCSSEEEECT-TCSSCCCCEEECTTSCEEECCCCEEES-SCCCCCCGGGGGGHHHHHHT
T ss_pred cccceeeecceEEEEECCC-CccCceeecCC-CCCCceEEEeCccCCcEEECCCccccc-ccccccCHHHHHHHHHHHHH
Confidence 24689999999998764 222222 2223 23333333 445788999999875411 24667788999999999999
Q ss_pred hcccCCCccceeeeeeeeeccccCCCCCCCCCCccccee-ee---cCCCeEEEecC---hhhhHHHHHHHHHHHHH
Q 006891 384 YLNVKVRRTDVLSAWSGIRPLAMDPSAKNTESISRDHVV-CE---DFPGLVTITGG---KWTTYRSMAEDAVNAAI 452 (627)
Q Consensus 384 ~~~~~l~~~~i~~~~aG~Rp~~~d~~~~~~~~~~r~~~i-~~---~~~gl~~~~Gg---~~t~~~~~Ae~~~~~~~ 452 (627)
++ |.+...++++.|+|+||.+++++ ...++|+| +. ..+|+++++|+ +||++|.+|+.+++++.
T Consensus 299 ~~-P~l~~~~v~~~w~G~Rp~~~~~~-----~~d~~p~i~g~~~~~~~~l~~~~G~~~~G~t~ap~~a~~~a~~i~ 368 (369)
T 3dme_A 299 YW-PALPDGALAPGYTGIRPKISGPH-----EPAADFAIAGPASHGVAGLVNLYGIESPGLTASLAIAEETLARLA 368 (369)
T ss_dssp TC-TTCCTTCCEEEEEEEEEESSCTT-----SCCCCCEEECHHHHCCTTEEEEECCCTTHHHHHHHHHHHHHHHHC
T ss_pred HC-CCCChhhceecceeccccccCCC-----CCcCCeEEecccccCCCCEEEEeCCCCchHhccHHHHHHHHHHhh
Confidence 99 89998999999999999985321 11257888 43 35799999987 59999999999999874
No 5
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=100.00 E-value=2.2e-32 Score=289.22 Aligned_cols=345 Identities=16% Similarity=0.182 Sum_probs=244.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCCCCcCCCCCcccchhhhhhhhhccCCcchHHHHHHHHHHHHHH
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQV 149 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~g~S~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 149 (627)
.++||+|||||++|+++|++|+++|++|+|||++++++++|++++|+++....... ...+..+.+.....+
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~~~~gas~~~~g~~~~~~~~~~---------~~~l~~~~~~~~~~l 74 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRFIGSGSTFRCGTGIRQQFNDEA---------NVRVMKRSVELWKKY 74 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSHHHHCCCCCCCCCSSHH---------HHHHHHHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCCccccccCeeeecCCChH---------HHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999998876543211 122222222222222
Q ss_pred HHHCCCCcccCCCccccCCchhHHHHHHHHHHHHHhhcCCCCCCccccCHHHHHhhCCccccccccCCceEE-EEecCce
Q 006891 150 IRNAPHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAKDRSLKGA-VVYYDGQ 228 (627)
Q Consensus 150 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~l~~~~~~~~~p~l~~~~~~~~~~g~-~~~~~g~ 228 (627)
...........+.+............. ...+.+. ..+++ .++++++++.+.+|.+ ......++ +.+.+++
T Consensus 75 ~~~~~~~~~~~g~l~~~~~~~~~~~~~---~~~~~~~-~~g~~-~~~l~~~~~~~~~p~~----~~~~~~~~~~~~~~~~ 145 (382)
T 1y56_B 75 SEEYGFSFKQTGYLFLLYDDEEVKTFK---RNIEIQN-KFGVP-TKLITPEEAKEIVPLL----DISEVIAASWNPTDGK 145 (382)
T ss_dssp HHHHTCCEECCCEEEEECSHHHHHHHH---HHHHHHH-HTTCC-CEEECHHHHHHSSTTC----CCTTCCEEEEETTCCE
T ss_pred HHHhCCCeeccceEEEEeCHHHHHHHH---HHHHHHH-hcCCC-cEEeCHHHHHHhCCCC----CcccceEEEEcCCCee
Confidence 221111111222222222211111111 1222222 45665 7889999999889987 43444444 5567899
Q ss_pred echHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhhcCCCC
Q 006891 229 MNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQNVQ 308 (627)
Q Consensus 229 ~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~g~~~~ 308 (627)
++|..++..+.+.+++.|++++++++|++|..++ + +++||++. +| +++||.||+|+|.|+..|.+.++....
T Consensus 146 ~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~-~-~v~gv~~~---~g---~i~a~~VV~A~G~~s~~l~~~~g~~~~ 217 (382)
T 1y56_B 146 ADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIEN-N-EIKGVKTN---KG---IIKTGIVVNATNAWANLINAMAGIKTK 217 (382)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEECSCCEEEEEESS-S-BEEEEEET---TE---EEECSEEEECCGGGHHHHHHHHTCCSC
T ss_pred ECHHHHHHHHHHHHHHCCCEEECCceEEEEEEEC-C-EEEEEEEC---Cc---EEECCEEEECcchhHHHHHHHcCCCcC
Confidence 9999999999999999999999999999999876 4 67777652 22 799999999999999999888876511
Q ss_pred CceecCcceEEEecCCCCCCCcceecccCCCCcEEEEEecCCcEEEec-CCCCCCCCCCCCCCHHHHHHHHHHHhhhccc
Q 006891 309 PMICPSSGVHIVLPDYYSPEGMGLIVPKTKDGRVVFMLPWLGRTVAGT-TDSDTVITLLPEPHEDEIQFILDAISDYLNV 387 (627)
Q Consensus 309 ~~i~p~kG~~lv~~~~~~~~~~~~~~~~~~dg~~~~~~P~~g~~~iG~-t~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~ 387 (627)
.++.|.||++++++........++++. .+...+|++|..+++++|. +.... ...+..++++.++.+++.+.+++ |
T Consensus 218 ~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~y~~p~~~g~~iG~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~-p 293 (382)
T 1y56_B 218 IPIEPYKHQAVITQPIKRGTINPMVIS--FKYGHAYLTQTFHGGIIGGIGYEIG-PTYDLTPTYEFLREVSYYFTKII-P 293 (382)
T ss_dssp CCCEEEEEEEEEECCCSTTSSCSEEEE--STTTTEEEECCSSSCCEEECSCCBS-SCCCCCCCHHHHHHHHHHHHHHC-G
T ss_pred cCCCeeEeEEEEEccCCcccCCCeEEe--cCCCeEEEEEeCCeEEEecCCCCCC-CCCCCCCCHHHHHHHHHHHHHhC-C
Confidence 468899999888864321111134443 2223578999764488884 32221 22355678899999999999999 8
Q ss_pred CCCccceeeeeeeeeccccCCCCCCCCCCcccceeeecC--CCeEEEecC---hhhhHHHHHHHHHHHHHHc
Q 006891 388 KVRRTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCEDF--PGLVTITGG---KWTTYRSMAEDAVNAAIKS 454 (627)
Q Consensus 388 ~l~~~~i~~~~aG~Rp~~~d~~~~~~~~~~r~~~i~~~~--~gl~~~~Gg---~~t~~~~~Ae~~~~~~~~~ 454 (627)
.+...++.+.|+|+||.++| +.|+|+..+ +|++.++|. ++++++.+|+.+++++.+.
T Consensus 294 ~l~~~~~~~~~~g~r~~t~d----------~~p~ig~~~~~~~~~~~~G~~g~G~~~a~~~g~~la~~i~~~ 355 (382)
T 1y56_B 294 ALKNLLILRTWAGYYAKTPD----------SNPAIGRIEELNDYYIAAGFSGHGFMMAPAVGEMVAELITKG 355 (382)
T ss_dssp GGGGSEEEEEEEEEEEECTT----------SCCEEEEESSSBTEEEEECCTTCHHHHHHHHHHHHHHHHHHS
T ss_pred CcCCCCceEEEEeccccCCC----------CCcEeccCCCCCCEEEEEecCcchHhhhHHHHHHHHHHHhCC
Confidence 88878899999999999988 478888753 799998874 4999999999999999875
No 6
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=100.00 E-value=9.6e-33 Score=291.58 Aligned_cols=338 Identities=17% Similarity=0.185 Sum_probs=239.0
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCC-CCCCCCcCCCCCcccchhhhhhhhhccCCcchHHHHHHHHHHHH
Q 006891 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERE-DFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERK 147 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~-~~~~g~S~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~ 147 (627)
+.++||+|||||++|+++|++|+ +|++|+|||++ .+++++|++++|+++..+.... ...+..+....
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~g~~as~~~~g~~~~~~~~~~---------~~~l~~~~~~~-- 74 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQPGYHSTGRSAAHYTVAYGTPQ---------VRALTAASRAF-- 74 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSSTTSSGGGSCCCEECSSSSCHH---------HHHHHHHHHHH--
T ss_pred CCcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCccccccccccceeecccCCHH---------HHHHHHHHHHH--
Confidence 44689999999999999999999 69999999999 4888999999999876532110 11111111111
Q ss_pred HHHHHCCCC-----cccCCCccccCCchhHHHHHHHHHHHHHhhcCCCCCCccccCHHHHHhhCCccccccccCCc-eEE
Q 006891 148 QVIRNAPHL-----SNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAKDRSL-KGA 221 (627)
Q Consensus 148 ~~~~~~~~~-----~~~~~~~~p~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~l~~~~~~~~~p~l~~~~~~~~~-~g~ 221 (627)
+.+....+ ....+.+...... ...... ...+.+. ..+++ .++++.+++.+.+|.+ ..+.. .+.
T Consensus 75 -~~~~~~~~~~~~~~~~~g~l~~~~~~-~~~~~~---~~~~~~~-~~g~~-~~~l~~~~~~~~~p~l----~~~~~~~~~ 143 (381)
T 3nyc_A 75 -FDNPPAGFCEHPLLSPRPEMVVDFSD-DPEELR---RQYESGK-ALVPQ-MRLLDAEQACSIVPVL----RRDKVFGAT 143 (381)
T ss_dssp -HHSCCTTSCSSCSEEECCEEEECSSC-CHHHHH---HHHHHHH-HHCTT-CEEECHHHHHHHSTTB----CGGGCCCEE
T ss_pred -HHHhhhhhCCcccccccceEEEechH-HHHHHH---HHHHHHH-HcCCC-cEEeCHHHHHHhCCCc----ccccceEEE
Confidence 11111111 1111111111111 111111 1122222 34554 7899999999999988 44434 344
Q ss_pred EEecCceechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhh
Q 006891 222 VVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRK 301 (627)
Q Consensus 222 ~~~~~g~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~ 301 (627)
+.+.+++++|..++..|.+.++++|++|+++++|++|..++ + . ++|++ .+ .+++||.||+|+|+|+..|.+
T Consensus 144 ~~~~~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~-~-~-~~V~t-----~~-g~i~a~~VV~A~G~~s~~l~~ 214 (381)
T 3nyc_A 144 YDPTGADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVD-G-A-WEVRC-----DA-GSYRAAVLVNAAGAWCDAIAG 214 (381)
T ss_dssp EETTCEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEET-T-E-EEEEC-----SS-EEEEESEEEECCGGGHHHHHH
T ss_pred EcCCCceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeC-C-e-EEEEe-----CC-CEEEcCEEEECCChhHHHHHH
Confidence 55668899999999999999999999999999999999876 3 4 44543 22 379999999999999999999
Q ss_pred hhcCCCCCceecCcceEEEecCCCCC--CCcceecccCCCCcEEEEEecCCcEEEecCCCCCCCCCCCCCCHHHHHHHHH
Q 006891 302 LADQNVQPMICPSSGVHIVLPDYYSP--EGMGLIVPKTKDGRVVFMLPWLGRTVAGTTDSDTVITLLPEPHEDEIQFILD 379 (627)
Q Consensus 302 ~~g~~~~~~i~p~kG~~lv~~~~~~~--~~~~~~~~~~~dg~~~~~~P~~g~~~iG~t~~~~~~~~~~~~~~~~~~~ll~ 379 (627)
+++.. ..++.|.||++++++.+... ...+.+.. . +..+|++|..|.+++|++++....+.+..+++..++.+++
T Consensus 215 ~~g~~-~~~~~p~rg~~~~~~~~~~~~~~~~p~~~~--~-~~~~y~~p~~g~~~ig~~~~~~~~~~~~~~~~~~~~~~~~ 290 (381)
T 3nyc_A 215 LAGVR-PLGLQPKRRSAFIFAPPPGIDCHDWPMLVS--L-DESFYLKPDAGMLLGSPANADPVEAHDVQPEQLDIATGMY 290 (381)
T ss_dssp HHTCC-CCCCEEEEEEEEEECCCTTCCCTTCCEEEE--T-TSSCEEEEETTEEEEECCCCEECCSSCCCCCHHHHHHHHH
T ss_pred HhCCC-CCceeeeEEEEEEECCCcCCCcCccceEEe--C-CCCEEEEeCCCcEEEeCCcCCCCCcccCCCChHHHHHHHH
Confidence 98865 24689999999988654211 11223332 1 2346889988889999987653233456677888889998
Q ss_pred HHhhhcccCCCccceeeeeeeeeccccCCCCCCCCCCcccceeeec--CCCeEEEecC---hhhhHHHHHHHHHHHHHHc
Q 006891 380 AISDYLNVKVRRTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCED--FPGLVTITGG---KWTTYRSMAEDAVNAAIKS 454 (627)
Q Consensus 380 ~~~~~~~~~l~~~~i~~~~aG~Rp~~~d~~~~~~~~~~r~~~i~~~--~~gl~~~~Gg---~~t~~~~~Ae~~~~~~~~~ 454 (627)
.+.+ + |.+...++.+.|+|+||.++| +.|+|+.. .+|++.++|. ++|+++.+|+.+++++.+.
T Consensus 291 ~~~~-~-~~l~~~~~~~~w~G~r~~t~D----------~~p~ig~~~~~~~l~~a~G~~g~G~~~ap~~g~~la~~i~g~ 358 (381)
T 3nyc_A 291 LIEE-A-TTLTIRRPEHTWAGLRSFVAD----------GDLVAGYAANAEGFFWVAAQGGYGIQTSAAMGEASAALIRHQ 358 (381)
T ss_dssp HHHH-H-BSCCCCCCSEEEEEEEEECTT----------SCCEEEECTTSTTEEEEECCTTCTTTTHHHHHHHHHHHHTTC
T ss_pred HHHh-c-CCCcccceeeeeEEccccCCC----------CCceecCCCCCCCeEEEEcCCChhHhhCHHHHHHHHHHHhCC
Confidence 8876 4 577777899999999999998 47899875 3799999885 3999999999999998754
No 7
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.98 E-value=8.6e-30 Score=271.37 Aligned_cols=342 Identities=17% Similarity=0.207 Sum_probs=244.3
Q ss_pred CCCCcEEEECCChHHHHHHHHHHH-CC-CeEEEEcCCCCCCCCcCCCCCcccchhhhhhhhhccCCcchHHHHHHHHHHH
Q 006891 69 SNPLDILVIGGGATGCGVALDAAT-RG-LRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEER 146 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~-~G-~~V~lvEk~~~~~g~S~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~l~~~ 146 (627)
+.++||+|||||++|+++|++|++ +| ++|+|||++++++|+|++++|+++....... ...+..+.+...
T Consensus 19 ~~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~~~~gas~~~~g~~~~~~~~~~---------~~~l~~~~~~~~ 89 (405)
T 2gag_B 19 KKSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGWLAGGNMARNTTIIRSNYLWDE---------SAGIYEKSLKLW 89 (405)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSSTTCSGGGTSCCCBCCCCSSHH---------HHHHHHHHHHHH
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCCCCCCcccccCceeeecCCCHH---------HHHHHHHHHHHH
Confidence 345899999999999999999999 99 9999999999999999999999887654321 122222333333
Q ss_pred HHHHHHCC--CCcccCCCccccCCchhHHHHHHHHHHHHHhhcCCCCCCccccCHHHHHhhCCcccccccc-----CCce
Q 006891 147 KQVIRNAP--HLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAKD-----RSLK 219 (627)
Q Consensus 147 ~~~~~~~~--~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~l~~~~~~~~~p~l~~~~~~-----~~~~ 219 (627)
..+..... ......+.+............ ....+.+. ..+.+ .++++..++...+|.+ .. ....
T Consensus 90 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~---~~~~~~~~-~~g~~-~~~l~~~~~~~~~p~~----~~~~~~~~~~~ 160 (405)
T 2gag_B 90 EQLPEDLEYDFLFSQRGVLNLAHTLGDVRES---VRRVEANK-LNGVD-AEWLDPSQVKEACPII----NTSDDIRYPVM 160 (405)
T ss_dssp HHHHHHTTCCCCCBCCCEEEEECSHHHHHHH---HHHHHHHH-TBTCC-CEEECHHHHHHHCTTS----CCSTTSSSCCC
T ss_pred HHHHHHhCCCcCEecccEEEEEcCHHHHHHH---HHHHHHHH-hcCCC-ceEeCHHHHHhhCCCC----cccccccccce
Confidence 33222211 111111222111111111111 12223332 45664 7889999998899987 43 2334
Q ss_pred EE-EEecCceechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHH
Q 006891 220 GA-VVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDS 298 (627)
Q Consensus 220 g~-~~~~~g~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~ 298 (627)
++ +.+.+++++|..++..+.+.+++.|++++++++|++|..++ + ++++|++. +| ++.||.||+|+|.|+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~-~-~~~~v~~~---~g---~~~a~~vV~a~G~~s~~ 232 (405)
T 2gag_B 161 GATWQPRAGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDG-E-KVTGVKTT---RG---TIHAGKVALAGAGHSSV 232 (405)
T ss_dssp EEEEETTCBBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESS-S-BEEEEEET---TC---CEEEEEEEECCGGGHHH
T ss_pred eEEEeCCCccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeC-C-EEEEEEeC---Cc---eEECCEEEECCchhHHH
Confidence 44 55678999999999999999999999999999999999876 5 67777652 33 68999999999999999
Q ss_pred HhhhhcCCCCCceecCcceEEEecCCCCCCCcceecccCCCCcEEEEEec-CCcEEEecCCCCCCCCCCCCCCHHHHHHH
Q 006891 299 VRKLADQNVQPMICPSSGVHIVLPDYYSPEGMGLIVPKTKDGRVVFMLPW-LGRTVAGTTDSDTVITLLPEPHEDEIQFI 377 (627)
Q Consensus 299 l~~~~g~~~~~~i~p~kG~~lv~~~~~~~~~~~~~~~~~~dg~~~~~~P~-~g~~~iG~t~~~~~~~~~~~~~~~~~~~l 377 (627)
+.+.++... ++.|.+|++++++.. .+....+++. .+..+|+.|. +|.+++|.+.++.. ..+..++++.++.+
T Consensus 233 l~~~~g~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~y~~p~~~g~~~ig~~~~~~~-~~~~~~~~~~~~~l 305 (405)
T 2gag_B 233 LAEMAGFEL--PIQSHPLQALVSELF-EPVHPTVVMS---NHIHVYVSQAHKGELVMGAGIDSYN-GYGQRGAFHVIQEQ 305 (405)
T ss_dssp HHHHHTCCC--CEEEEEEEEEEEEEB-CSCCCSEEEE---TTTTEEEEECTTSEEEEEEEECSSC-CCSSCCCTHHHHHH
T ss_pred HHHHcCCCC--CccccceeEEEecCC-ccccCceEEe---CCCcEEEEEcCCCcEEEEeccCCCC-ccccCCCHHHHHHH
Confidence 998888763 688999988877532 1111223332 1235788885 57788998765321 23445667889999
Q ss_pred HHHHhhhcccCCCccceeeeeeeeeccccCCCCCCCCCCcccceeeec-CCCeEEEecC---hhhhHHHHHHHHHHHHHH
Q 006891 378 LDAISDYLNVKVRRTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCED-FPGLVTITGG---KWTTYRSMAEDAVNAAIK 453 (627)
Q Consensus 378 l~~~~~~~~~~l~~~~i~~~~aG~Rp~~~d~~~~~~~~~~r~~~i~~~-~~gl~~~~Gg---~~t~~~~~Ae~~~~~~~~ 453 (627)
++.+.+++ |.+...++...|+|+||.++| +.|+|+.. .+|++.++|. +++.++.+|+.+++++.+
T Consensus 306 ~~~~~~~~-p~l~~~~~~~~w~g~~~~t~d----------~~p~ig~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~g 374 (405)
T 2gag_B 306 MAAAVELF-PIFARAHVLRTWGGIVDTTMD----------ASPIISKTPIQNLYVNCGWGTGGFKGTPGAGFTLAHTIAN 374 (405)
T ss_dssp HHHHHHHC-GGGGGCEECEEEEEEEEEETT----------SCCEEEECSSBTEEEEECCGGGCSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHhC-CccccCCcceEEeeccccCCC----------CCCEecccCCCCEEEEecCCCchhhHHHHHHHHHHHHHhC
Confidence 99999999 788777899999999999988 47888875 3799999875 499999999999999987
Q ss_pred c
Q 006891 454 S 454 (627)
Q Consensus 454 ~ 454 (627)
.
T Consensus 375 ~ 375 (405)
T 2gag_B 375 D 375 (405)
T ss_dssp T
T ss_pred C
Confidence 5
No 8
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.98 E-value=5e-30 Score=271.63 Aligned_cols=342 Identities=13% Similarity=0.117 Sum_probs=237.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCC--CCcCCCCCcccchhhhhhhhhccCCcchHHHHHHHHHHHHH
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSS--GTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~--g~S~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 148 (627)
++||+|||||++|+++|++|+++|++|+|||++++++ |+|..++++++..+... .....+..+.+.....
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~~--------~~~~~l~~~~~~~~~~ 74 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEG--------REYVPLALRSQELWYE 74 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSCSSSSSCSSEEEECSSCTTC--------GGGHHHHHHHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCcchhhhhhhcCC--------chHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999998877 88888888876532110 0122233333333333
Q ss_pred HHHHCC-CCcccCCCccccCCchhHHHHHHHHHHHHHhhcCCCCCCccccCHHHHHhhCCccccccccCCceEE-EEecC
Q 006891 149 VIRNAP-HLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAKDRSLKGA-VVYYD 226 (627)
Q Consensus 149 ~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~l~~~~~~~~~p~l~~~~~~~~~~g~-~~~~~ 226 (627)
+.+... .+....+.+...... ...... ...+.+. ..+++ .++++.+++.+.+|.+ ......++ +.+.+
T Consensus 75 l~~~~~~~~~~~~g~~~~~~~~-~~~~~~---~~~~~~~-~~g~~-~~~l~~~~~~~~~p~~----~~~~~~~~~~~~~~ 144 (389)
T 2gf3_A 75 LEKETHHKIFTKTGVLVFGPKG-ESAFVA---ETMEAAK-EHSLT-VDLLEGDEINKRWPGI----TVPENYNAIFEPNS 144 (389)
T ss_dssp HHHHCSSCCEECCCEEEEEETT-CCHHHH---HHHHHHH-HTTCC-CEEEETHHHHHHSTTC----CCCTTEEEEEETTC
T ss_pred HHHHhCCcceeecceEEEcCCC-chHHHH---HHHHHHH-HcCCC-cEEcCHHHHHHhCCCc----ccCCCceEEEeCCC
Confidence 322221 222222222211110 111111 1122222 35665 6788999998899987 44444444 45668
Q ss_pred ceechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhhcCC
Q 006891 227 GQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQN 306 (627)
Q Consensus 227 g~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~g~~ 306 (627)
++++|.+++..+.+.++++|++++++++|++|..++++ + .|.. ++ .+++||.||+|+|.|+..+.+.++..
T Consensus 145 ~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~--~-~v~~----~~--g~~~a~~vV~A~G~~~~~l~~~~g~~ 215 (389)
T 2gf3_A 145 GVLFSENCIRAYRELAEARGAKVLTHTRVEDFDISPDS--V-KIET----AN--GSYTADKLIVSMGAWNSKLLSKLNLD 215 (389)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSC--E-EEEE----TT--EEEEEEEEEECCGGGHHHHGGGGTEE
T ss_pred cEEeHHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCe--E-EEEe----CC--CEEEeCEEEEecCccHHHHhhhhccC
Confidence 89999999999999999999999999999999987643 2 2332 12 26999999999999999998877643
Q ss_pred CCCceecCcceEEEecCCCC----CCCcceecccCCCCcEEEEEecC-C-cEEEecCCCC---CCCCCCCCC--CHHHHH
Q 006891 307 VQPMICPSSGVHIVLPDYYS----PEGMGLIVPKTKDGRVVFMLPWL-G-RTVAGTTDSD---TVITLLPEP--HEDEIQ 375 (627)
Q Consensus 307 ~~~~i~p~kG~~lv~~~~~~----~~~~~~~~~~~~dg~~~~~~P~~-g-~~~iG~t~~~---~~~~~~~~~--~~~~~~ 375 (627)
.++.|.+|+++.++.... ....+.++....+ ..+|++|.. + .+++|.+... .....+..+ +++.++
T Consensus 216 --~pl~~~rg~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~y~~p~~~g~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (389)
T 2gf3_A 216 --IPLQPYRQVVGFFESDESKYSNDIDFPGFMVEVPN-GIYYGFPSFGGCGLKLGYHTFGQKIDPDTINREFGVYPEDES 292 (389)
T ss_dssp --CCCEEEEEEEEEECCCHHHHBGGGTCCEEEEEETT-EEEEEECBSTTCCEEEEESSCCEECCTTTCCCCTTSSHHHHH
T ss_pred --CceEEEEEEEEEEecCcccccccccCCEEEEeCCC-CcEEEcCCCCCCcEEEEEcCCCCccCcccccCccCCCHHHHH
Confidence 358999999998865320 0011222221122 268899975 4 8899877521 112234556 888999
Q ss_pred HHHHHHhhhcccCCCccceeeeeeeeeccccCCCCCCCCCCcccceeeecC--CCeEEEecC---hhhhHHHHHHHHHHH
Q 006891 376 FILDAISDYLNVKVRRTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCEDF--PGLVTITGG---KWTTYRSMAEDAVNA 450 (627)
Q Consensus 376 ~ll~~~~~~~~~~l~~~~i~~~~aG~Rp~~~d~~~~~~~~~~r~~~i~~~~--~gl~~~~Gg---~~t~~~~~Ae~~~~~ 450 (627)
.+++.+.++| |.+.. .+++.|+|+||.++| +.|+|+..+ +|++.++|. ++++++.+|+.++++
T Consensus 293 ~l~~~~~~~~-P~l~~-~~~~~w~g~r~~t~D----------~~p~ig~~~~~~~l~~a~G~~g~G~~~ap~~g~~la~~ 360 (389)
T 2gf3_A 293 NLRAFLEEYM-PGANG-ELKRGAVCMYTKTLD----------EHFIIDLHPEHSNVVIAAGFSGHGFKFSSGVGEVLSQL 360 (389)
T ss_dssp HHHHHHHHHC-GGGCS-CEEEEEEEEEEECTT----------SCCEEEEETTEEEEEEEECCTTCCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHhC-CCCCC-CceEEEEEEeccCCC----------CCeEEccCCCCCCEEEEECCccccccccHHHHHHHHHH
Confidence 9999999999 77766 789999999999998 478888753 689999884 499999999999999
Q ss_pred HHHc
Q 006891 451 AIKS 454 (627)
Q Consensus 451 ~~~~ 454 (627)
+.+.
T Consensus 361 i~~~ 364 (389)
T 2gf3_A 361 ALTG 364 (389)
T ss_dssp HHHS
T ss_pred HcCC
Confidence 9875
No 9
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.98 E-value=9.8e-31 Score=282.61 Aligned_cols=338 Identities=17% Similarity=0.121 Sum_probs=234.8
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCC-CeEEEEcC-CCCCCCCcCCCCCcccchhhhhhhhhccCCcchHHHHHHHHHHH
Q 006891 69 SNPLDILVIGGGATGCGVALDAATRG-LRVGLVER-EDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEER 146 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~G-~~V~lvEk-~~~~~g~S~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~l~~~ 146 (627)
+.++||||||||++|+++|++|+++| ++|+|||+ ..++.|+|+.++|+++....... ...+..+.+...
T Consensus 21 m~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~~~g~S~~~~g~i~~~~~~~~---------~~~l~~~~~~~~ 91 (448)
T 3axb_A 21 MPRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAPGSGDSGRSMAAFRTFFSSTM---------NRLVAGSTVRLF 91 (448)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSSTTCSGGGSSCCEEECCCSSHH---------HHHHHHHHHHHH
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCCCCCcccCCCcEecccCCCHH---------HHHHHHHHHHHH
Confidence 45699999999999999999999999 99999999 78889999999999987543211 122222333333
Q ss_pred HHHHHHCCCC-cccCCCccccCCchhHHHHHHHHHHHHHhhcCCCCCCc-----ccc-----------CHHHHHhhCCcc
Q 006891 147 KQVIRNAPHL-SNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLS-----RYY-----------SAQESAELFPTL 209 (627)
Q Consensus 147 ~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~g~~~~~~l~~~~g~~~~-----~~l-----------~~~~~~~~~p~l 209 (627)
..+....... ....+.+. .......... ...++.+ ...+++ . +++ +.+++.. +
T Consensus 92 ~~l~~~g~~~~~~~~g~l~-~~~~~~~~~~---~~~~~~~-~~~g~~-~~p~~~~~l~~~g~~~~~~~~~~~~~~----~ 161 (448)
T 3axb_A 92 EDAQRGGEDLGLVKSGYLF-VYDRERWREV---EEPLREA-GEEGRD-YLIIPPEELERRLGMNTRVSDGEEAEV----L 161 (448)
T ss_dssp HHHHHTTCCCCCBCCCEEE-EECHHHHHHH---HHHHTTS-CCBTTT-EEEECHHHHHHHHCCCCCCTTSSHHHH----H
T ss_pred HHHHhcCcccccccCCEEE-EcCHHHHHHH---HHHHHHH-HhhCCC-ccccchhhhhhcccccccCCCHHHHHh----c
Confidence 3322221111 11112222 1111111100 0111211 234443 4 555 6666554 1
Q ss_pred ccccccCCceEE-EEecCceechHHHHHHHHHHHHHcCCEEEcCcEEEEEEE---------------cCCCCeEEEEEEE
Q 006891 210 AMKAKDRSLKGA-VVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIK---------------DEASNRIIGARIR 273 (627)
Q Consensus 210 ~~~~~~~~~~g~-~~~~~g~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~---------------~~~g~~v~gV~~~ 273 (627)
......++ +.+.++++++.+++..+.+.++++|++|+++++|++|.. ++ + ++++|.+
T Consensus 162 ----~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~-~-~v~~V~t- 234 (448)
T 3axb_A 162 ----GVGDVEGAVLIRSAGFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQE-A-RASAAVL- 234 (448)
T ss_dssp ----TCCCCCEEEEESSEEECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSC-E-EEEEEEE-
T ss_pred ----cCCCceEEEEeCCCeEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCC-C-ceEEEEe-
Confidence 12334444 445688999999999999999999999999999999988 44 4 6777765
Q ss_pred ecCCCcEEEE--EcCeEEeccCCChHHHhhhhcCCCCCceecCcceEEEecCCCCCCC-------------cceecccCC
Q 006891 274 NNLSGKEFDT--YAKVVVNAAGPFCDSVRKLADQNVQPMICPSSGVHIVLPDYYSPEG-------------MGLIVPKTK 338 (627)
Q Consensus 274 d~~~g~~~~i--~A~~VV~AtG~~s~~l~~~~g~~~~~~i~p~kG~~lv~~~~~~~~~-------------~~~~~~~~~ 338 (627)
.+| ++ .||.||+|+|+|+..|+++++.. .++.|.||++++++....... .++++.
T Consensus 235 --~~g---~i~~~Ad~VV~AtG~~s~~l~~~~g~~--~~~~p~rg~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--- 304 (448)
T 3axb_A 235 --SDG---TRVEVGEKLVVAAGVWSNRLLNPLGID--TFSRPKKRMVFRVSASTEGLRRIMREGDLAGAGAPPLIIL--- 304 (448)
T ss_dssp --TTS---CEEEEEEEEEECCGGGHHHHHGGGTCC--CSEEEEEEEEEEEECCSHHHHHHHHHCCTTSSSSCCEEEE---
T ss_pred --CCC---EEeecCCEEEECCCcCHHHHHHHcCCC--CcccccceEEEEeCCcccccccccccccccccCCCceEEc---
Confidence 234 57 99999999999999999988765 468999999998864321000 122221
Q ss_pred CCcEEEEEecC--CcEEEecCCCCC-CCCCCC--CCCHHH-HHHHHHHHhhhcccCCCccceeeeeeeeecc-ccCCCCC
Q 006891 339 DGRVVFMLPWL--GRTVAGTTDSDT-VITLLP--EPHEDE-IQFILDAISDYLNVKVRRTDVLSAWSGIRPL-AMDPSAK 411 (627)
Q Consensus 339 dg~~~~~~P~~--g~~~iG~t~~~~-~~~~~~--~~~~~~-~~~ll~~~~~~~~~~l~~~~i~~~~aG~Rp~-~~d~~~~ 411 (627)
...+|++|+. |.+++|++.+.. +...+. .++++. ++.+++.+.++| |.+...++.+.|+|+||. ++|
T Consensus 305 -~~~~y~~p~~~~g~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-P~l~~~~~~~~w~G~r~~~t~d---- 378 (448)
T 3axb_A 305 -PKRVLVRPAPREGSFWVQLSDNLGRPFALEEDPQPEEHYYSLAILPILSLYL-PQFQDAYPSGGWAGHYDISFDA---- 378 (448)
T ss_dssp -TTTEEEEEETTTTEEEEEECCCTTSCBCCCSSCCCCHHHHHHHTHHHHHHHC-GGGTTCCCSEEEEEEEEEETTS----
T ss_pred -CCceEEeecCCCCeEEEecCCcccCCcccccccCCChHHHHHHHHHHHHHhC-cCcccCCcccceEEEeccccCC----
Confidence 1457899975 579999987631 112233 677888 999999999999 888878899999999999 988
Q ss_pred CCCCCcccceeeecCCCeEEEecC---hhhhHHHHHHHHHHHHHHc
Q 006891 412 NTESISRDHVVCEDFPGLVTITGG---KWTTYRSMAEDAVNAAIKS 454 (627)
Q Consensus 412 ~~~~~~r~~~i~~~~~gl~~~~Gg---~~t~~~~~Ae~~~~~~~~~ 454 (627)
+.|+|+..++|++.++|. ++|+++.+|+.+++++.+.
T Consensus 379 ------~~p~ig~~~~~l~~a~G~~g~G~~~ap~~g~~la~~i~~~ 418 (448)
T 3axb_A 379 ------NPVVFEPWESGIVVAAGTSGSGIMKSDSIGRVAAAVALGM 418 (448)
T ss_dssp ------SCEEECGGGCSEEEEECCTTCCGGGHHHHHHHHHHHHTTC
T ss_pred ------CCcEeeecCCCEEEEECCCchhHhHhHHHHHHHHHHHcCC
Confidence 478887655899999885 4999999999999998754
No 10
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.97 E-value=5.1e-29 Score=264.82 Aligned_cols=343 Identities=14% Similarity=0.082 Sum_probs=231.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCC--CCcCCCCCcccchhhhhhhhhccCCcchHHHHHHHHHHHHH
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSS--GTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~--g~S~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 148 (627)
++||+|||||++|+++|++|+++|++|+||||.+.+. |+|+.++++++...... ....+..+.+.....
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~~~~gas~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~ 74 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFNENGGTSGAERHWRLQYTQE---------DLFRLTLETLPLWRA 74 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTCSSSSCCSSEEEECSCCSSH---------HHHHHHHHHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCcCeEEEeccCcc---------hhhhHHHHHHHHHHH
Confidence 4899999999999999999999999999999998766 78877777664321100 011222222222222
Q ss_pred HHHH-CCCCcccCCCccccCCch--hHHHHHHHHHHHHHhhcCCCCCCccccCHHHHHhhCCccccccccCCc-eEEEEe
Q 006891 149 VIRN-APHLSNALPCMTPCFDWF--EVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAKDRSL-KGAVVY 224 (627)
Q Consensus 149 ~~~~-~~~~~~~~~~~~p~~~~~--~~~~~~~g~~~~~~l~~~~g~~~~~~l~~~~~~~~~p~l~~~~~~~~~-~g~~~~ 224 (627)
+... ...+....+.+....... ..... ....+.+. ..|++ .+.++..++...+|.+ ..... .+.+.+
T Consensus 75 l~~~~~~~~~~~~g~l~~~~~~~~~~~~~~---~~~~~~~~-~~g~~-~~~l~~~~~~~~~p~~----~~~~~~~~~~~~ 145 (397)
T 2oln_A 75 LESRCERRLIHEIGSLWFGDTDVVTNEGQI---SGTAAMMD-KLSVR-YEWLKATDIERRFGFR----GLPRDYEGFLQP 145 (397)
T ss_dssp HHHHHTCCCEECCCEEEEECSSCCBTTBCH---HHHHHHHH-HTTCC-CEEEEHHHHHHHHCCC----SCCTTCEEEEET
T ss_pred HHHHhCccHHHHCCcEEEcCCCccchhHHH---HHHHHHHH-HcCCC-ceecCHHHHHhhCcCc----cCCCceeEEEcC
Confidence 2211 112222222111111100 00000 01122222 34554 6778888888888876 33333 344556
Q ss_pred cCceechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhhc
Q 006891 225 YDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLAD 304 (627)
Q Consensus 225 ~~g~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~g 304 (627)
.+++++|..++..+.+.+++.|++|+++++|++|..+++ .+. | .. .+ .+++||.||+|+|+|+..+.+.++
T Consensus 146 ~~g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~--~v~-v--~t-~~---g~i~a~~VV~A~G~~s~~l~~~~g 216 (397)
T 2oln_A 146 DGGTIDVRGTLAALFTLAQAAGATLRAGETVTELVPDAD--GVS-V--TT-DR---GTYRAGKVVLACGPYTNDLLEPLG 216 (397)
T ss_dssp TCEEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETT--EEE-E--EE-SS---CEEEEEEEEECCGGGHHHHHGGGT
T ss_pred CCCEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCC--eEE-E--EE-CC---CEEEcCEEEEcCCcChHHHhhhcC
Confidence 688999999999999999999999999999999998763 432 3 32 22 269999999999999999998887
Q ss_pred CCCCCceecCcceEEEecCCCCCCCcceecccCCCCc----EEEEEecC-C----cEEEecCCC--C--CCCCCCCCCCH
Q 006891 305 QNVQPMICPSSGVHIVLPDYYSPEGMGLIVPKTKDGR----VVFMLPWL-G----RTVAGTTDS--D--TVITLLPEPHE 371 (627)
Q Consensus 305 ~~~~~~i~p~kG~~lv~~~~~~~~~~~~~~~~~~dg~----~~~~~P~~-g----~~~iG~t~~--~--~~~~~~~~~~~ 371 (627)
.. .++.|.+|+++.++........+.++....+++ .+|++|.. + .+++|.+.. . .....+..+++
T Consensus 217 ~~--~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~y~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 294 (397)
T 2oln_A 217 AR--LAYSVYEMAIAAYRQATPVTEAPFWFAFQQPTPQDTNLFYGFGHNPWAPGEFVRCGPDFEVDPLDHPSAATGVADR 294 (397)
T ss_dssp CC--CCEEEEEEEEEEEEBCSCCSCCCEEEEECCCCSSSCCCEEECCCCSSSSSSEEEEEECCCCSCCSSGGGCCSSCCH
T ss_pred CC--CCeeEEEEEEEEEeecCcccCCCEEEEecCCCCcccceEEECCCCCCCCCceEEEEecCCCCCcCCCccccCCCCH
Confidence 64 468999999988864321111222222122332 67888964 3 588997663 1 11223456788
Q ss_pred HHHHHHHHHHhhhcccCCCccceeeeeeeeec--cccCCCCCCCCCCcccceeeec------CCCeEEEecCh-hhhHHH
Q 006891 372 DEIQFILDAISDYLNVKVRRTDVLSAWSGIRP--LAMDPSAKNTESISRDHVVCED------FPGLVTITGGK-WTTYRS 442 (627)
Q Consensus 372 ~~~~~ll~~~~~~~~~~l~~~~i~~~~aG~Rp--~~~d~~~~~~~~~~r~~~i~~~------~~gl~~~~Gg~-~t~~~~ 442 (627)
+.++.+++.+.++| |.+.. .+...|+|+|+ .++| +.|+|+.. .+|++.++||. +++++.
T Consensus 295 ~~~~~l~~~~~~~~-p~l~~-~~~~~~~g~~~~p~t~D----------~~p~ig~~~~~~~~~~~l~~a~Gg~G~~~ap~ 362 (397)
T 2oln_A 295 RQMDRLSGWLRDHL-PTVDP-DPVRTSTCLAVLPTDPE----------RQFFLGTARDLMTHGEKLVVYGAGWAFKFVPL 362 (397)
T ss_dssp HHHHHHHHHHHHHC-TTBCS-SCSEEEEEEEEEESSTT----------CCCEEEESTTTSTTGGGEEEEEESSCGGGHHH
T ss_pred HHHHHHHHHHHHhC-CCCCC-CceeEEEEEecCCcCCC----------CCeEeecCCccccCCCCEEEEeCcchhhccHH
Confidence 89999999999999 77765 68889999987 9988 47899874 36899998853 999999
Q ss_pred HHHHHHHHHHHc
Q 006891 443 MAEDAVNAAIKS 454 (627)
Q Consensus 443 ~Ae~~~~~~~~~ 454 (627)
+|+.+++++.+.
T Consensus 363 ~g~~la~~i~~~ 374 (397)
T 2oln_A 363 FGRICADLAVED 374 (397)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHhCC
Confidence 999999999875
No 11
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.97 E-value=1.3e-29 Score=267.82 Aligned_cols=335 Identities=18% Similarity=0.228 Sum_probs=234.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCCCCcCCCCCcccchhhhhhhhhccCCcchHHHHHHHHHHHHH
Q 006891 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~g~S~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 148 (627)
+.++||+|||||++|+++|++|+++|++|+|||++++++|+|+.++|+++.+..+... .....+..+.+.....
T Consensus 15 ~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~~~g~s~~~~g~~~~~~~~~~~------~~~~~l~~~~~~~~~~ 88 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGGRTTSAAAGMLGAHAECEER------DAFFDFAMHSQRLYKG 88 (382)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTTTHHHHCCCBCCGGGSCSSC------SHHHHHHHHHHHHTTT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCcccchhcCceeccCccCCCC------cHHHHHHHHHHHHHHH
Confidence 4569999999999999999999999999999999999999999999999876543210 0111222222221111
Q ss_pred HH----H-HC-CCCcccCCCccccCCchhHHHHHHHHHHHHHhhcCCCCCCccccCHHHHHhhCCccccccccCCceEE-
Q 006891 149 VI----R-NA-PHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAKDRSLKGA- 221 (627)
Q Consensus 149 ~~----~-~~-~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~l~~~~~~~~~p~l~~~~~~~~~~g~- 221 (627)
+. . .. .......+.+......... ..+.... .. ...++++.+++...+|.+ . ....++
T Consensus 89 ~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~------~~~~~~~--~~--~~~~~l~~~~~~~~~p~~----~-~~~~~~~ 153 (382)
T 1ryi_A 89 LGEELYALSGVDIRQHNGGMFKLAFSEEDV------LQLRQMD--DL--DSVSWYSKEEVLEKEPYA----S-GDIFGAS 153 (382)
T ss_dssp HHHHHHHHHCCCCCCBCCCEEEEESSHHHH------HHHHTTT--TS--TTEEEEEHHHHHHHCTTS----C-TTCCEEE
T ss_pred HHHHHHHhhCCCcCeeecceEEEEeCHHHH------HHHHHHh--hc--CCeEEECHHHHHHhCCCC----C-cccceEE
Confidence 10 0 01 0001111111111110000 0111111 11 347888999998899987 4 333444
Q ss_pred EEecCceechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhh
Q 006891 222 VVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRK 301 (627)
Q Consensus 222 ~~~~~g~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~ 301 (627)
+.+.++.+++..++..+.+.+++.|++++++++|++|..+++ ++ +|.+ .+| +++||.||+|+|.|+..+.+
T Consensus 154 ~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~--~~-~v~~---~~g---~~~a~~vV~A~G~~s~~l~~ 224 (382)
T 1ryi_A 154 FIQDDVHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGE--AL-FIKT---PSG---DVWANHVVVASGVWSGMFFK 224 (382)
T ss_dssp EETTCCBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSSS--SE-EEEE---TTE---EEEEEEEEECCGGGTHHHHH
T ss_pred EeCCCeEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECC--EE-EEEc---CCc---eEEcCEEEECCChhHHHHHH
Confidence 445689999999999999999999999999999999988764 44 5544 222 78999999999999998988
Q ss_pred hhcCCCCCceecCcceEEEecCCCCCCCcceecccCCCCcEEEEEec-CCcEEEecCCCCCCCCCCCCCCHHHHHHHHHH
Q 006891 302 LADQNVQPMICPSSGVHIVLPDYYSPEGMGLIVPKTKDGRVVFMLPW-LGRTVAGTTDSDTVITLLPEPHEDEIQFILDA 380 (627)
Q Consensus 302 ~~g~~~~~~i~p~kG~~lv~~~~~~~~~~~~~~~~~~dg~~~~~~P~-~g~~~iG~t~~~~~~~~~~~~~~~~~~~ll~~ 380 (627)
.++.. .++.|.+|+++.++...... ..+++. + ..|++|. +|.+++|.+.+.. ..+..++++..+.+++.
T Consensus 225 ~~~~~--~~~~~~~g~~~~~~~~~~~~-~~~~~~---~--~~~~~p~~~g~~~vG~~~~~~--~~~~~~~~~~~~~l~~~ 294 (382)
T 1ryi_A 225 QLGLN--NAFLPVKGECLSVWNDDIPL-TKTLYH---D--HCYIVPRKSGRLVVGATMKPG--DWSETPDLGGLESVMKK 294 (382)
T ss_dssp HTTCC--CCCEEEEEEEEEEECCSSCC-CSEEEE---T--TEEEEECTTSEEEEECCCEET--CCCCSCCHHHHHHHHHH
T ss_pred hcCCC--CceeccceEEEEECCCCCCc-cceEEc---C--CEEEEEcCCCeEEEeeccccc--CCCCCCCHHHHHHHHHH
Confidence 87754 35889999998876532211 122322 2 3688897 4678999986543 23456778899999999
Q ss_pred HhhhcccCCCccceeeeeeeeeccccCCCCCCCCCCcccceeeecC--CCeEEEecC---hhhhHHHHHHHHHHHHHHc
Q 006891 381 ISDYLNVKVRRTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCEDF--PGLVTITGG---KWTTYRSMAEDAVNAAIKS 454 (627)
Q Consensus 381 ~~~~~~~~l~~~~i~~~~aG~Rp~~~d~~~~~~~~~~r~~~i~~~~--~gl~~~~Gg---~~t~~~~~Ae~~~~~~~~~ 454 (627)
+.+++ |.+...++...|+|+||.++| +.|+|+..+ +|++.++|. +++.++.+|+.+++++.+.
T Consensus 295 ~~~~~-p~l~~~~~~~~w~g~~~~t~d----------~~p~ig~~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~~~ 362 (382)
T 1ryi_A 295 AKTML-PAIQNMKVDRFWAGLRPGTKD----------GKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIMNK 362 (382)
T ss_dssp HHHHC-GGGGGSEEEEEEEEEEEECSS----------SCCEEEEETTEEEEEEEECCSSCTTTTHHHHHHHHHHHHTTC
T ss_pred HHHhC-CCcCCCceeeEEEEecccCCC----------CCcEeccCCCcCCEEEEEcCCcchHHHhHHHHHHHHHHHhCC
Confidence 99999 778777899999999999988 468887643 688888764 4999999999999998754
No 12
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.97 E-value=4.7e-29 Score=282.91 Aligned_cols=340 Identities=16% Similarity=0.101 Sum_probs=228.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC-CCCCCcCCCCCcccchhhhhhhhhccCCcchHHHHHHHHHHHH
Q 006891 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERED-FSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERK 147 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~-~~~g~S~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~ 147 (627)
+.++||||||||++|+++|+.|+++|++|+||||++ +++|+|+.++|++++.+......+..+....+....+.+.
T Consensus 262 ~~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~a~~~~~--- 338 (689)
T 3pvc_A 262 TRCDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQPAQGASGNRQGALYPLLNGKNDALETFFTSAFTFARRQYD--- 338 (689)
T ss_dssp SCCSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSSTTCSGGGCSCEEECCCCCSSCSHHHHHHHHHHHHHHHHHH---
T ss_pred CCCCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCccccccccccCCEEecCCCCCChHHHHHHHHHHHHHHHHHH---
Confidence 346999999999999999999999999999999974 7888999999998865432111000000000000111111
Q ss_pred HHHHHCCCC-cccCCCccccCCchhHHHHHHHHHHHHHhhcCCCCC--CccccCHHHHHhhCCccccccccCCceEEEEe
Q 006891 148 QVIRNAPHL-SNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLH--LSRYYSAQESAELFPTLAMKAKDRSLKGAVVY 224 (627)
Q Consensus 148 ~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~g~~~~~~l~~~~g~~--~~~~l~~~~~~~~~p~l~~~~~~~~~~g~~~~ 224 (627)
.+....... ....+.+......... ..+..+. ..+++ ..++++.+++...+| + . ....+.+.+
T Consensus 339 ~l~~~~~~~~~~~~g~l~~~~~~~~~------~~~~~~~--~~g~~~~~~~~l~~~~~~~~~~-l----~-~~~gg~~~p 404 (689)
T 3pvc_A 339 QLLEQGIAFDHQWCGVSQLAFDDKSR------GKIEKML--HTQWPVEFAEAMSREQLSELAG-L----D-CAHDGIHYP 404 (689)
T ss_dssp HHHHTTCCCCEECCCEEEECCSHHHH------HHHHHHT--TSCCCTTTCEEECHHHHHHHHS-S----C-CSSCEEEET
T ss_pred HhhhhccccccccCceEEeccCHHHH------HHHHHHH--hcCCChHHhhccCHHHHHHhcC-C----C-cccceEEec
Confidence 110110000 0111111111111000 0112222 34544 234889988888887 5 1 233445566
Q ss_pred cCceechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhhc
Q 006891 225 YDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLAD 304 (627)
Q Consensus 225 ~~g~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~g 304 (627)
.+++++|..++..+.+.+++.|++|+++++|++|..++++ + +|.+. +|. .++.||.||+|+|.|+..+....+
T Consensus 405 ~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~--v-~V~t~---~G~-~~i~Ad~VVlAtG~~s~~l~~~~~ 477 (689)
T 3pvc_A 405 AGGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQ--W-QLTFG---QSQ-AAKHHATVILATGHRLPEWEQTHH 477 (689)
T ss_dssp TCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSS--E-EEEEC----CC-CCEEESEEEECCGGGTTCSTTTTT
T ss_pred CCeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCe--E-EEEeC---CCc-EEEECCEEEECCCcchhccccccC
Confidence 7899999999999999999999999999999999998743 3 45442 232 158999999999999988887654
Q ss_pred CCCCCceecCcceEEEecCCCCCCCcceecccCCCCcEEEEEecC---CcEEEecCCCCCCCCCCCCCCHHHHHHHHHHH
Q 006891 305 QNVQPMICPSSGVHIVLPDYYSPEGMGLIVPKTKDGRVVFMLPWL---GRTVAGTTDSDTVITLLPEPHEDEIQFILDAI 381 (627)
Q Consensus 305 ~~~~~~i~p~kG~~lv~~~~~~~~~~~~~~~~~~dg~~~~~~P~~---g~~~iG~t~~~~~~~~~~~~~~~~~~~ll~~~ 381 (627)
.++.|.||+++.++..........++. .+ .|++|.. |.+++|.+.+.. ..+..+++++.+.+++.+
T Consensus 478 ----lpl~p~rGq~~~~~~~~~~~~l~~v~~--~~---~Yl~P~~~~~g~~~iGat~~~~--~~d~~~~~~~~~~ll~~l 546 (689)
T 3pvc_A 478 ----LPLSAVRGQVSHIPTTPVLSQLQQVLC--YD---GYLTPVNPANQHHCIGASYQRG--DIATDFRLTEQQENRERL 546 (689)
T ss_dssp ----SCCEEEEEEEEEEECCTTGGGCCSEEE--SS---SEECCCBTTTTEEEEECCCEET--BCCCCCCHHHHHHHHHHH
T ss_pred ----CccccccCcEEEECCCCccccCCeeEe--CC---ceEccccCCCCeEEEEEeccCC--CCCCCCCHHHHHHHHHHH
Confidence 358899999999875322111122222 22 4889975 678999987653 235677889999999999
Q ss_pred hhhcccCCC-----ccceeeeeeeeeccccCCCCCCCCCCcccceeeec-------------------------------
Q 006891 382 SDYLNVKVR-----RTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCED------------------------------- 425 (627)
Q Consensus 382 ~~~~~~~l~-----~~~i~~~~aG~Rp~~~d~~~~~~~~~~r~~~i~~~------------------------------- 425 (627)
.+++ |.+. ...+.+.|+|+||.++| +.|+|+..
T Consensus 547 ~~~~-P~l~~~~~~~~~~~~~w~G~R~~t~D----------~lPiiG~~p~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~ 615 (689)
T 3pvc_A 547 LRCL-PQVSWPQQVDVSDNQARCGVRCAIRD----------HLPMVGAVPDYAATLAQYQDLSRRIQHGGESEVNDIAVA 615 (689)
T ss_dssp HHHC-TTCSGGGGCCCTTCCEEEEEEEECTT----------SCCEEEEEECHHHHHHHSTTHHHHC--------CCCCCC
T ss_pred HHhC-CCccccccccccccceeEEEeeecCC----------CCcccCcCCCHHHHHHHHHhhhccccccccccccccccC
Confidence 9999 7765 23468999999999999 46777752
Q ss_pred --CCCeEEEecC---hhhhHHHHHHHHHHHHHHc
Q 006891 426 --FPGLVTITGG---KWTTYRSMAEDAVNAAIKS 454 (627)
Q Consensus 426 --~~gl~~~~Gg---~~t~~~~~Ae~~~~~~~~~ 454 (627)
.+|++.++|. ++|++|.+|+.++++|.+.
T Consensus 616 ~~~~~l~~a~G~g~~Gl~~ap~~ae~lA~~i~g~ 649 (689)
T 3pvc_A 616 PVWPELFMVGGLGSRGLCSAPLVAEILAAQMFGE 649 (689)
T ss_dssp CEEEEEEEEECCTTCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCChHHhhcccccHHHHHHHHHHHHHHHHcCC
Confidence 2589988885 3999999999999998643
No 13
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.96 E-value=2.1e-28 Score=257.57 Aligned_cols=336 Identities=15% Similarity=0.084 Sum_probs=223.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCCC--CcCCCCCcccchhhhhhhhhccCCcchHHHHHHHHHHHHH
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSG--TSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~g--~S~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 148 (627)
++||+|||||++|+++|++|+++|++|+|||+++.+.+ +|..++++++..+.. ......+..+.+.....
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~~~~~~ 73 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGE--------GEKYVPLVLRAQMLWDE 73 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSSSSSSSCCSSEEEECSSCTT--------CGGGHHHHHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCccceeeeccCC--------CchHHHHHHHHHHHHHH
Confidence 48999999999999999999999999999999976653 333333344321110 01122233333333333
Q ss_pred HHHHCC---CCcccCCCccccCCchhHHHHHHHHHHHHHhhcCCCCCCccccCHHHHHhhCCccccccccCCc-eEEEEe
Q 006891 149 VIRNAP---HLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAKDRSL-KGAVVY 224 (627)
Q Consensus 149 ~~~~~~---~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~l~~~~~~~~~p~l~~~~~~~~~-~g~~~~ 224 (627)
+. ... ......+.+...... ..... ...+.+. ..+++ .++++.+++.+.+|.+ ..+.. .+.+.+
T Consensus 74 l~-~~~~~~~~~~~~g~l~~~~~~--~~~~~---~~~~~~~-~~g~~-~~~l~~~~~~~~~p~~----~~~~~~~~~~~~ 141 (372)
T 2uzz_A 74 LS-RHNEDDPIFVRSGVINLGPAD--STFLA---NVAHSAE-QWQLN-VEKLDAQGIMARWPEI----RVPDNYIGLFET 141 (372)
T ss_dssp HH-TTCSSSCSEECCCEEEEEETT--CHHHH---HHHHHHH-HTTCC-EEEEEHHHHHHHCTTC----CCCTTEEEEEES
T ss_pred HH-HhCCCccceeeeceEEEeCCC--cHHHH---HHHHHHH-HcCCC-cEecCHHHHHhhCCCc----cCCCCceEEEeC
Confidence 22 111 111111111111111 11111 1122222 45665 7899999999999986 33333 344567
Q ss_pred cCceechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhhc
Q 006891 225 YDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLAD 304 (627)
Q Consensus 225 ~~g~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~g 304 (627)
.+++++|..++..+.+.+++.|++++++++|++|..++++ + .|.. .+| ++.||.||+|+|.|+..+...
T Consensus 142 ~~g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~--~-~v~~---~~g---~~~a~~vV~a~G~~s~~l~~~-- 210 (372)
T 2uzz_A 142 DSGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDG--V-TIET---ADG---EYQAKKAIVCAGTWVKDLLPE-- 210 (372)
T ss_dssp SCEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS--E-EEEE---SSC---EEEEEEEEECCGGGGGGTSTT--
T ss_pred CCcEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCE--E-EEEE---CCC---eEEcCEEEEcCCccHHhhccc--
Confidence 7999999999999999999999999999999999987643 2 3433 233 589999999999999887652
Q ss_pred CCCCCceecCcceEEEecCCC--CC-CCcceecccCCCCcEEEEEec-CCcEEEecCCCC--CC---CCCCCCCCHHHHH
Q 006891 305 QNVQPMICPSSGVHIVLPDYY--SP-EGMGLIVPKTKDGRVVFMLPW-LGRTVAGTTDSD--TV---ITLLPEPHEDEIQ 375 (627)
Q Consensus 305 ~~~~~~i~p~kG~~lv~~~~~--~~-~~~~~~~~~~~dg~~~~~~P~-~g~~~iG~t~~~--~~---~~~~~~~~~~~~~ 375 (627)
.++.|.||+++.+.... .. ...+.+.....++..+|++|. ++.+++|.+... .+ ...+..++++..+
T Consensus 211 ----l~~~p~rg~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~y~~p~~~~~~~iG~~~~g~~~~~~~~~~~~~~~~~~~~ 286 (372)
T 2uzz_A 211 ----LPVQPVRKVFAWYQADGRYSVKNKFPAFTGELPNGDQYYGFPAENDALKIGKHNGGQVIHSADERVPFAEVVSDGS 286 (372)
T ss_dssp ----CCCEEEECCEEEECCCGGGSTTTTCCEEEEECTTCCEEEEECCSSSCEEEEESSCCEECCSGGGCCCTTTSTTGGG
T ss_pred ----cCceEEEEEEEEEEeccccCccccCCEEEEecCCCCeEEecCCCCCeEEEEecCCCCccCChhhccCCCCCHHHHH
Confidence 35889999988775421 10 112222221235567888896 468889987521 11 1122334556788
Q ss_pred HHHHHHhhhcccCCCccceeeeeeeeeccccCCCCCCCCCCcccceeeecC--CCeEEEecC---hhhhHHHHHHHHHHH
Q 006891 376 FILDAISDYLNVKVRRTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCEDF--PGLVTITGG---KWTTYRSMAEDAVNA 450 (627)
Q Consensus 376 ~ll~~~~~~~~~~l~~~~i~~~~aG~Rp~~~d~~~~~~~~~~r~~~i~~~~--~gl~~~~Gg---~~t~~~~~Ae~~~~~ 450 (627)
.+++.+.++| |.+. ++...|+|+||.++| +.|+|+..+ +|++.++|. ++|+++.+|+.++++
T Consensus 287 ~l~~~~~~~~-P~l~--~~~~~~~g~r~~t~d----------~~p~ig~~~~~~~l~~~~G~~g~G~~~ap~~g~~la~~ 353 (372)
T 2uzz_A 287 EAFPFLRNVL-PGIG--CCLYGAACTYDNSPD----------EDFIIDTLPGHDNTLLITGLSGHGFKFASVLGEIAADF 353 (372)
T ss_dssp SSHHHHHHHS-CSCC--CEEEECCCEEEECTT----------SCCCEEEETTEEEEEEECCCCSCCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHC-CCCC--ccceeeEEeeccCCC----------CCeEEecCCCCCCEEEEeCCCccchhccHHHHHHHHHH
Confidence 8999999999 8876 688999999999998 468888653 689999885 499999999999999
Q ss_pred HHHc
Q 006891 451 AIKS 454 (627)
Q Consensus 451 ~~~~ 454 (627)
+.+.
T Consensus 354 i~~~ 357 (372)
T 2uzz_A 354 AQDK 357 (372)
T ss_dssp HTTC
T ss_pred HhCC
Confidence 8754
No 14
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.96 E-value=1.3e-28 Score=279.14 Aligned_cols=333 Identities=14% Similarity=0.092 Sum_probs=228.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCC-CCCCCCcCCCCCcccchhhhhhhhhccCCcchHHHHHHHHHHHHH
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERE-DFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~-~~~~g~S~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 148 (627)
..+||||||||++|+++|+.|+++|++|+||||+ .+++|+|+.++|++++........ ..............
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~-------~~~~~~~~~~~~~~ 343 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEA-------LNRFFSNAFTFARR 343 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSCSTTCCSCEEECCCCCSSCHH-------HHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcccccCccCCCceecCcCCCCccH-------HHHHHHHHHHHHHH
Confidence 3589999999999999999999999999999996 478889999999988654322111 01111111111122
Q ss_pred HHHHCCCCc--ccCCCccccCCchhHHHHHHHHHHHHHhhcCCCCC--CccccCHHHHHhhCCccccccccCCceEEEEe
Q 006891 149 VIRNAPHLS--NALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLH--LSRYYSAQESAELFPTLAMKAKDRSLKGAVVY 224 (627)
Q Consensus 149 ~~~~~~~~~--~~~~~~~p~~~~~~~~~~~~g~~~~~~l~~~~g~~--~~~~l~~~~~~~~~p~l~~~~~~~~~~g~~~~ 224 (627)
+++....-. ...+.+......... ..+.... ..+++ ..++++.++....+| + . ....+.+.+
T Consensus 344 ~~~~l~~~~~~~~~g~l~~~~~~~~~------~~~~~~~--~~g~~~~~~~~l~~~~~~~~~~-l----~-~~~gg~~~p 409 (676)
T 3ps9_A 344 FYDQLPVKFDHDWCGVTQLGWDEKSQ------HKIAQML--SMDLPAELAVAVEANAVEQITG-V----A-TNCSGITYP 409 (676)
T ss_dssp HHHHCCSCCCEECCCEEEECCSHHHH------HHHHHHH--TSCCCTTTCEEECHHHHHHHHS-S----C-CSSCEEEET
T ss_pred HHHHCCCCcCcCcCCeeeecCCHHHH------HHHHHHH--hcCCcHHHhhhCCHHHHHHhhC-C----C-ccCCcEEec
Confidence 222221100 001111111111010 0111222 33444 345889888888777 4 1 223344556
Q ss_pred cCceechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhhc
Q 006891 225 YDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLAD 304 (627)
Q Consensus 225 ~~g~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~g 304 (627)
.+++++|..++..+.+.+++.|++|+++++|++|..+++ ++ +|.+ .+|. +++||.||+|+|.|+..+.+..+
T Consensus 410 ~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~--~v-~V~t---~~G~--~i~Ad~VVlAtG~~s~~l~~~~~ 481 (676)
T 3ps9_A 410 QGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDD--CW-LLNF---AGDQ--QATHSVVVLANGHQISRFSQTST 481 (676)
T ss_dssp TCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETT--EE-EEEE---TTSC--EEEESEEEECCGGGGGCSTTTTT
T ss_pred CCeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCC--eE-EEEE---CCCC--EEECCEEEECCCcchhccccccC
Confidence 689999999999999999999999999999999999774 43 4544 2343 68999999999999988877654
Q ss_pred CCCCCceecCcceEEEecCCCCCCCcceecccCCCCcEEEEEecC---CcEEEecCCCCCCCCCCCCCCHHHHHHHHHHH
Q 006891 305 QNVQPMICPSSGVHIVLPDYYSPEGMGLIVPKTKDGRVVFMLPWL---GRTVAGTTDSDTVITLLPEPHEDEIQFILDAI 381 (627)
Q Consensus 305 ~~~~~~i~p~kG~~lv~~~~~~~~~~~~~~~~~~dg~~~~~~P~~---g~~~iG~t~~~~~~~~~~~~~~~~~~~ll~~~ 381 (627)
.++.|.||+++.++..........++. .+ .|++|.. |.+++|.+.+.. ..+..+++++++++++.+
T Consensus 482 ----lpl~p~rGq~~~~~~~~~~~~l~~~l~--~~---~Yl~P~~~~~g~~~iG~t~~~~--~~d~~~~~~~~~~~l~~l 550 (676)
T 3ps9_A 482 ----LPVYSVAGQVSHIPTTPELAELKQVLC--YD---GYLTPQNPANQHHCIGASYHRG--SEDTAYSEDDQQQNRQRL 550 (676)
T ss_dssp ----CSCEEEEEEEEEEECCTTGGGCCSEEE--SS---SEECCCBTTTTEEEEECCCEET--CCCCCCCHHHHHHHHHHH
T ss_pred ----CcceeecCEEEEECCCcccccCCceeE--CC---eeeccccCCCCeEEEeeccCCC--CCCCCCCHHHHHHHHHHH
Confidence 358899999998865322111112221 22 4889965 778999987653 245677889999999999
Q ss_pred hhhcccCCC-----ccceeeeeeeeeccccCCCCCCCCCCcccceeeec-------------------------CCCeEE
Q 006891 382 SDYLNVKVR-----RTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCED-------------------------FPGLVT 431 (627)
Q Consensus 382 ~~~~~~~l~-----~~~i~~~~aG~Rp~~~d~~~~~~~~~~r~~~i~~~-------------------------~~gl~~ 431 (627)
.+++ |.+. ...+.+.|+|+||.++| +.|+|+.. .+|++.
T Consensus 551 ~~~~-P~l~~~~~~d~~~~~~~~G~R~~t~D----------~lPiiG~~p~~~~~~~~y~~l~~~~~~~~~~~~~~~l~~ 619 (676)
T 3ps9_A 551 IDCF-PQAQWAKEVDVSDKEARCGVRCATRD----------HLPMVGNVPDYEATLVEYASLAEQKDEAVSAPVFDDLFM 619 (676)
T ss_dssp HHHS-TTCHHHHTCCCTTCCEEEEEEEECTT----------CCCEEEEEECHHHHHHHTTTTTSCCTTCCSCCEEEEEEE
T ss_pred HHhC-CCccccccCcccccceEEEEeCccCC----------cCCccCcCCChHHHHHHHHhhhccccccccCCCCCCEee
Confidence 9999 7764 23468999999999999 46888753 258998
Q ss_pred EecC---hhhhHHHHHHHHHHHHHH
Q 006891 432 ITGG---KWTTYRSMAEDAVNAAIK 453 (627)
Q Consensus 432 ~~Gg---~~t~~~~~Ae~~~~~~~~ 453 (627)
++|. ++|++|.+|+.++++|.+
T Consensus 620 a~G~g~~Gl~~Ap~~ae~lA~~i~g 644 (676)
T 3ps9_A 620 FAALGSRGLCSAPLCAEILAAQMSD 644 (676)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHHTT
T ss_pred eecccccHHHHHHHHHHHHHHHHcC
Confidence 8875 399999999999999864
No 15
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.96 E-value=6.2e-28 Score=279.45 Aligned_cols=339 Identities=15% Similarity=0.168 Sum_probs=235.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEcCCCC--CCCCcCCCCCcccchhhhhhhhhccCCcchHHHHHHHHHHHH
Q 006891 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVEREDF--SSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERK 147 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~~~--~~g~S~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~ 147 (627)
++||||||||++|+++|++|+++|+ +|+|||+++. .+|+|++++|++...... .....+....+..
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~~~~~gss~~~~G~~~~~~~~---------~~~~~l~~~s~~~-- 72 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLNMPGGSTSHAPGLVFQTNPS---------KTMASFAKYTVEK-- 72 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCTTCCCSGGGTCCCEECCCCSC---------HHHHHHHHHHHHH--
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCCCCCcccceeCCceeecCCCC---------HHHHHHHHHHHHH--
Confidence 5899999999999999999999998 9999999976 356777777766432100 0011111111111
Q ss_pred HHHHHCCC---CcccCCCccccCCchhHHHHHHHHHHHHHhhcCCCCCCccccCHHHHHhhCCccccccccCCceEEE-E
Q 006891 148 QVIRNAPH---LSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAKDRSLKGAV-V 223 (627)
Q Consensus 148 ~~~~~~~~---~~~~~~~~~p~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~l~~~~~~~~~p~l~~~~~~~~~~g~~-~ 223 (627)
+.+.... .....+.+............ ......+. ..|++ .++++++++.+.+|.+ ......+++ .
T Consensus 73 -~~~l~~~~~~~~~~~G~l~~~~~~~~~~~l---~~~~~~~~-~~G~~-~~~l~~~e~~~~~p~l----~~~~~~gg~~~ 142 (830)
T 1pj5_A 73 -LLSLTEDGVSCFNQVGGLEVATTETRLADL---KRKLGYAA-AWGIE-GRLLSPAECQELYPLL----DGENILGGLHV 142 (830)
T ss_dssp -HHHCEETTEESEECCCEEEEESSHHHHHHH---HHHHHHHH-HHTCC-CEEECHHHHHHHCTTS----CGGGCCEEEEE
T ss_pred -HHHHHhhCCCCeeecCcEEEEeCHHHHHHH---HHHHHHHH-HcCCC-eEEECHHHHHHhCccC----CccceEEEEEE
Confidence 1111100 00111111111111111111 11122221 34554 7899999999999988 444445554 4
Q ss_pred ecCceechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhh
Q 006891 224 YYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLA 303 (627)
Q Consensus 224 ~~~g~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~ 303 (627)
+.+++++|..++..|.+.++++|++|+++++|++|..++ + ++++|.+. + .+++||.||+|+|.|+..+.+++
T Consensus 143 ~~~g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~-~-~v~~V~t~---~---G~i~Ad~VV~AaG~~s~~l~~~~ 214 (830)
T 1pj5_A 143 PSDGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSG-G-RVTGVQTA---D---GVIPADIVVSCAGFWGAKIGAMI 214 (830)
T ss_dssp TTCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-T-EEEEEEET---T---EEEECSEEEECCGGGHHHHHHTT
T ss_pred CCCceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeC-C-EEEEEEEC---C---cEEECCEEEECCccchHHHHHHh
Confidence 568999999999999999999999999999999999876 5 77777652 2 27999999999999999999888
Q ss_pred cCCCCCceecCcceEEEecCCCC--C-------CCcceecccCCCCcEEEEEecCCcEEEecCCCCC--------C----
Q 006891 304 DQNVQPMICPSSGVHIVLPDYYS--P-------EGMGLIVPKTKDGRVVFMLPWLGRTVAGTTDSDT--------V---- 362 (627)
Q Consensus 304 g~~~~~~i~p~kG~~lv~~~~~~--~-------~~~~~~~~~~~dg~~~~~~P~~g~~~iG~t~~~~--------~---- 362 (627)
|.. .++.|.+|+++++..... . ...+++. ..+ ..+|+.|..+.+++|.+.... .
T Consensus 215 g~~--~pl~p~~g~~~~~~~~~~~~~~~~~~~~~~~pv~~--~~~-~~~y~r~~~~~l~iG~~~~~~~~~~~~~~~~t~~ 289 (830)
T 1pj5_A 215 GMA--VPLLPLAHQYVKTTPVPAQQGRNDQPNGARLPILR--HQD-QDLYYREHGDRYGIGSYAHRPMPVDVDTLGAYAP 289 (830)
T ss_dssp TCC--CCCEEEEEEEEEESCCGGGTTTSCTTTCCCSCEEE--EGG-GTEEEEEETTEEEEEECCSCCCBCCGGGSCCCCG
T ss_pred CCC--ccceeceeEEEEEecCcccccccccccCCCCCeEE--cCC-CCEEEEEeCCeEEEeccCCCCcccCccccccccc
Confidence 765 468999999988754211 0 1112221 112 246888988888888764310 0
Q ss_pred -------CCCCCCCCHHHHHHHHHHHhhhcccCCCccceeeeeeeeeccccCCCCCCCCCCcccceeeecC--CCeEEEe
Q 006891 363 -------ITLLPEPHEDEIQFILDAISDYLNVKVRRTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCEDF--PGLVTIT 433 (627)
Q Consensus 363 -------~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~i~~~~aG~Rp~~~d~~~~~~~~~~r~~~i~~~~--~gl~~~~ 433 (627)
.+.+..++.+.++.+++.+.++| |.+...++.+.|+|+||.++| ..|+|+..+ +|++.++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-P~l~~~~i~~~w~G~r~~t~D----------~~PiIG~~p~~~gl~va~ 358 (830)
T 1pj5_A 290 ETVSEHHMPSRLDFTLEDFLPAWEATKQLL-PALADSEIEDGFNGIFSFTPD----------GGPLLGESKELDGFYVAE 358 (830)
T ss_dssp GGCBTTBSTTEECCCHHHHHHHHHHHHHHC-GGGGGSCEEEEEEEEEEECTT----------SCCEEEECSSSBTEEEEE
T ss_pred ccccccccccccCCCHHHHHHHHHHHHHhC-ccccccCcceEEEeecccCCC----------CCeeeccCCCCCCEEEEE
Confidence 01233567889999999999999 888888899999999999998 478898753 7999999
Q ss_pred cChhhhHHHHHHHHHHHHHHc
Q 006891 434 GGKWTTYRSMAEDAVNAAIKS 454 (627)
Q Consensus 434 Gg~~t~~~~~Ae~~~~~~~~~ 454 (627)
|..+|.++++|+.++++|.+.
T Consensus 359 G~G~~~ap~~g~~la~li~~~ 379 (830)
T 1pj5_A 359 AVWVTHSAGVAKAMAELLTTG 379 (830)
T ss_dssp SCCGGGHHHHHHHHHHHHHHS
T ss_pred CchHHhhHHHHHHHHHHHhCC
Confidence 988999999999999999876
No 16
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.96 E-value=3.4e-27 Score=254.07 Aligned_cols=338 Identities=14% Similarity=0.113 Sum_probs=216.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCC-eEEEEcCCCCCCCCcCC-CCCcccchhhhhhhhhccCCcchH------HHHH
Q 006891 69 SNPLDILVIGGGATGCGVALDAATRGL-RVGLVEREDFSSGTSSR-STKLIHGGVRYLEKAVFNLDYGQL------KLVF 140 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~~~~~g~S~~-~~~~i~~g~~~~~~~~~~~~~~~~------~~~~ 140 (627)
+.++||||||||++|+++|++|+++|+ +|+||||++.+++.++. +.+.+.... +.. .... .+..
T Consensus 4 ~~~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~l~~ 75 (438)
T 3dje_A 4 TKSSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVPSAISAGNDVNKVISSG-QYS-------NNKDEIEVNEILAE 75 (438)
T ss_dssp CTTSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSSCTTCTTCSSCEEECCC-CSC-------CCHHHHHHHHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCCCCCccCCCCccEEEec-cCC-------chhhhcchhHHHHH
Confidence 346999999999999999999999999 99999999876655432 222111110 100 0111 1222
Q ss_pred HHHHHHHHHHHHCCCC---cccCCCccccCCchhHHHHHHHHHHHHHhhcCCCCCCccccCHHHHHhhCCc-cccccccC
Q 006891 141 HALEERKQVIRNAPHL---SNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPT-LAMKAKDR 216 (627)
Q Consensus 141 ~~l~~~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~l~~~~~~~~~p~-l~~~~~~~ 216 (627)
+.+.. +...+.. ....+.+.......... .+...+....+.+..++++.+++.+.+|. + ...
T Consensus 76 ~~~~~----~~~~~~~~~~~~~~g~l~~~~~~~~~~------~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~l----~~~ 141 (438)
T 3dje_A 76 EAFNG----WKNDPLFKPYYHDTGLLMSACSQEGLD------RLGVRVRPGEDPNLVELTRPEQFRKLAPEGV----LQG 141 (438)
T ss_dssp HHHHH----HHHCTTTGGGEECCCEEEEECSHHHHH------HHHHHHCGGGCTTCEEECSHHHHHTTSCTTT----SCS
T ss_pred HHHHH----HhhCccccCcEeccceEEEecCcchHH------HHHHHHhhcccCCceecCCHHHHHHhCCccc----ccC
Confidence 22221 1111111 11111111111111111 11222222335543478889999888886 4 223
Q ss_pred Cce---EEEEecC-ceechHHHHHHHHHHHHHcCCEEEcCc---EEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEE
Q 006891 217 SLK---GAVVYYD-GQMNDSRLNVGLALTAALAGAAVLNHA---EVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVV 289 (627)
Q Consensus 217 ~~~---g~~~~~~-g~~~~~~l~~~l~~~a~~~Gv~i~~~t---~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV 289 (627)
.+. +.+.+.+ +++++..++..|.+.++++|++|++++ +|++|..++ + +++||++. +| .+++||.||
T Consensus 142 ~~~g~~g~~~~~~~g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~-~-~v~gV~t~---~G--~~i~Ad~VV 214 (438)
T 3dje_A 142 DFPGWKGYFARSGAGWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFEN-N-DVKGAVTA---DG--KIWRAERTF 214 (438)
T ss_dssp CCTTCEEEEESSSCEEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEET-T-EEEEEEET---TT--EEEECSEEE
T ss_pred CCCCceEEEeCCCCEEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecC-C-eEEEEEEC---CC--CEEECCEEE
Confidence 333 4455668 899999999999999999999999999 999999876 5 78888773 34 379999999
Q ss_pred eccCCChHHHhhhhcCCCCCceecCcceEEEec--CCCC--CCCcceecccCCCCcEEEEEec-CCc-EEEecCCCCC--
Q 006891 290 NAAGPFCDSVRKLADQNVQPMICPSSGVHIVLP--DYYS--PEGMGLIVPKTKDGRVVFMLPW-LGR-TVAGTTDSDT-- 361 (627)
Q Consensus 290 ~AtG~~s~~l~~~~g~~~~~~i~p~kG~~lv~~--~~~~--~~~~~~~~~~~~dg~~~~~~P~-~g~-~~iG~t~~~~-- 361 (627)
+|+|+|+..|.+ ++ .++.|.+++...++ .... ....+++.. .+..+|+.|. +++ ++||....-.
T Consensus 215 ~AtG~~s~~l~~-l~----~~~~p~~~~~~~~~l~~~~~~~~~~~p~~~~---~~~~~~~~p~~~~~~l~i~~~~~g~~~ 286 (438)
T 3dje_A 215 LCAGASAGQFLD-FK----NQLRPTAWTLVHIALKPEERALYKNIPVIFN---IERGFFFEPDEERGEIKICDEHPGYTN 286 (438)
T ss_dssp ECCGGGGGGTSC-CT----TCCEEEEEEEEEEECCGGGHHHHTTCCEEEE---TTTEEECSCCTTTCEEEEEECCSCEEC
T ss_pred ECCCCChhhhcC-cc----cceeeEEEEEEEEEcChHHhhhhcCCCEEEE---CCCceecCCCCCCCeEEEEeCCCCccC
Confidence 999999998876 32 23566654433332 2110 012233332 1245676676 434 5564211100
Q ss_pred ----------CCCC-CCCCCHHHHHHHHHHHhhhcccCCCccceeeeeeeeeccccCCCCCCCCCCcccceeeec--CCC
Q 006891 362 ----------VITL-LPEPHEDEIQFILDAISDYLNVKVRRTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCED--FPG 428 (627)
Q Consensus 362 ----------~~~~-~~~~~~~~~~~ll~~~~~~~~~~l~~~~i~~~~aG~Rp~~~d~~~~~~~~~~r~~~i~~~--~~g 428 (627)
..+. +...+++..+.+.+.+.++| |.+...++.+.|+|+||.++| ..|+|+.. .+|
T Consensus 287 ~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~-P~l~~~~~~~~~~g~~~~t~D----------~~piig~~p~~~~ 355 (438)
T 3dje_A 287 MVQSADGTMMSIPFEKTQIPKEAETRVRALLKETM-PQLADRPFSFARICWCADTAN----------REFLIDRHPQYHS 355 (438)
T ss_dssp EEECTTCCEEECCCCCSSCBHHHHHHHHHHHHHHC-GGGTTCCCSEEEEEEEEECTT----------SCCEEEECSSCTT
T ss_pred CccCCCcccccCCcccccCCHHHHHHHHHHHHHhC-cccccCCcceeeEEEeCcCCC----------CCeEEeecCCCCC
Confidence 0011 23456778899999999999 899888899999999999998 47889875 479
Q ss_pred eEEEecC---hhhhHHHHHHHHHHHHHHc
Q 006891 429 LVTITGG---KWTTYRSMAEDAVNAAIKS 454 (627)
Q Consensus 429 l~~~~Gg---~~t~~~~~Ae~~~~~~~~~ 454 (627)
++.++|. +|+.+|.+|+.+++++.+.
T Consensus 356 l~~a~G~~g~G~~~ap~~g~~la~~i~g~ 384 (438)
T 3dje_A 356 LVLGCGASGRGFKYLPSIGNLIVDAMEGK 384 (438)
T ss_dssp EEEEECCTTCCGGGTTTHHHHHHHHHHTC
T ss_pred EEEEECCCCcchhhhHHHHHHHHHHHhCC
Confidence 9999885 3999999999999999765
No 17
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.96 E-value=6.3e-28 Score=256.91 Aligned_cols=323 Identities=16% Similarity=0.071 Sum_probs=211.0
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHC--CCeEEEEcCCCCCCCCcCCCCC-cccchhhhhhhhhccCCcchHHHHHHHHHH
Q 006891 69 SNPLDILVIGGGATGCGVALDAATR--GLRVGLVEREDFSSGTSSRSTK-LIHGGVRYLEKAVFNLDYGQLKLVFHALEE 145 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~--G~~V~lvEk~~~~~g~S~~~~~-~i~~g~~~~~~~~~~~~~~~~~~~~~~l~~ 145 (627)
..++||+|||||++|+++|++|+++ |++|+|||+++++.++|+.+.+ .++....+.. ....+..+.+..
T Consensus 34 ~~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~--------~~~~l~~~~~~~ 105 (405)
T 3c4n_A 34 EEAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPA--------GQEAQAEWTREQ 105 (405)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCT--------TCHHHHHHHHHH
T ss_pred cCcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeecccCCc--------hHHHHHHHHHHH
Confidence 3459999999999999999999999 9999999999988888887776 3421111100 012222222211
Q ss_pred HHHHHHHC-CCCcccCCCccccCCchhHHHHHHHHHHHHHhhcCCCCCCccccCHHHHHhhCCccccccc-----cCCce
Q 006891 146 RKQVIRNA-PHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAK-----DRSLK 219 (627)
Q Consensus 146 ~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~l~~~~~~~~~p~l~~~~~-----~~~~~ 219 (627)
........ .......+.+. ..+.. ...+ +++..++...+|.+ . .....
T Consensus 106 ~~~~~~~~~~~~~~~~g~l~----------------~~~~~-~~~g-----~l~~~~~~~~~p~~----~~~~~~~~~~~ 159 (405)
T 3c4n_A 106 LLGALGSGKTLEVEDRPLLH----------------LLPAG-EGSG-----LTPTLDALADFPEA----LALLDPARLPV 159 (405)
T ss_dssp HHTGGGSSCCCCEEECCEEE----------------EESSC-CSSS-----CEEHHHHTTTCHHH----HTTSCTTTSCE
T ss_pred HHHHhCCCCCCcEEeeCeEE----------------ehhhH-hHCC-----CCCHHHHHHhCCCc----cccccCCcceE
Confidence 11100000 00000000000 00000 0111 55666666666655 3 23334
Q ss_pred EEEEecCceechHHHHHHHHHHHHHcCCEEEcCcEEE---------EEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEe
Q 006891 220 GAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVI---------SLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVN 290 (627)
Q Consensus 220 g~~~~~~g~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~---------~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~ 290 (627)
+.+.+.++++++..++..|.+.+++.|++++++++|+ +|..++ + ++ +|.+ .+ .+++||.||+
T Consensus 160 ~~~~~~~g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~-~-~v-~v~~-----~~-g~i~a~~VV~ 230 (405)
T 3c4n_A 160 ARVDPRALTYRPGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTN-T-HQ-IVVH-----ET-RQIRAGVIIV 230 (405)
T ss_dssp EEEETTCEEECHHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC----------CB-----CC-EEEEEEEEEE
T ss_pred EEEcCCCEEEcHHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeC-C-eE-EEEE-----CC-cEEECCEEEE
Confidence 4456778999999999999999999999999999999 887765 3 44 4533 22 3799999999
Q ss_pred ccCCChHHHhh-hhcCCCCCceecCcceEEEecCCCCCCCcceecccCCCCcEEEEEecC-CcEEEecCCC--CCCCC--
Q 006891 291 AAGPFCDSVRK-LADQNVQPMICPSSGVHIVLPDYYSPEGMGLIVPKTKDGRVVFMLPWL-GRTVAGTTDS--DTVIT-- 364 (627)
Q Consensus 291 AtG~~s~~l~~-~~g~~~~~~i~p~kG~~lv~~~~~~~~~~~~~~~~~~dg~~~~~~P~~-g~~~iG~t~~--~~~~~-- 364 (627)
|+|.|+..|++ .++... ++.|.+|+++.++.... ....++. ...+|++|+. |.+++|+++. ..+..
T Consensus 231 A~G~~s~~l~~~~~g~~~--~~~~~~g~~~~~~~~~~-~~~~~~~-----~~~~y~~p~~~g~~~~G~t~~~~~~~~~~~ 302 (405)
T 3c4n_A 231 AAGAAGPALVEQGLGLHT--RHGRAYRQFPRLDLLSG-AQTPVLR-----ASGLTLRPQNGGYTLVPAIHHRDPHGYHPA 302 (405)
T ss_dssp CCGGGHHHHHHHHHCCCC--CCEEEEEECCEECSCCC-TTCCEEE-----ETTEEEEEETTEEEEECCCCSCBCSSCCCC
T ss_pred CCCccHHHHHHHhcCCCC--CcccceeEEEEECCCCc-cCCCeEE-----CCcEEEEEcCCCeEEEeccccccccCcCcc
Confidence 99999999988 888653 47899999887764221 1112322 1347899976 4577888743 21111
Q ss_pred ------CCCCCCHHHHHHHHHHHhhhcccCCCcc---------ceeeeeeeeeccccCCCCCCCCCCcccceeeecCCCe
Q 006891 365 ------LLPEPHEDEIQFILDAISDYLNVKVRRT---------DVLSAWSGIRPLAMDPSAKNTESISRDHVVCEDFPGL 429 (627)
Q Consensus 365 ------~~~~~~~~~~~~ll~~~~~~~~~~l~~~---------~i~~~~aG~Rp~~~d~~~~~~~~~~r~~~i~~~~~gl 429 (627)
.+...+.+.++.+++.+ ++| |.+... ++++.|+|+||.++| +.|+|+..++|+
T Consensus 303 ~~~~~~~~~~~~~~~~~~l~~~~-~~~-P~l~~~~~~~~r~~~~i~~~w~G~r~~t~D----------~~P~ig~~~~gl 370 (405)
T 3c4n_A 303 GGSLTGVPTGLRRELLEDLVGLM-DAV-PALAGEGLELGRSSADVPGAWLALPGGRPD----------APPQAEELAPGL 370 (405)
T ss_dssp CCCBTTBCCSSCHHHHHHHHHHT-TTC-GGGGSSCBCCCSSGGGSCEEEEEEGGGCTT----------CCCEEEEEETTE
T ss_pred cccccccccCCCHHHHHHHHHHH-HhC-CCccccCccccccccceeeEEEeecCcCCC----------CCCEecccCCCe
Confidence 12345577788887664 788 666543 388999999999998 478888766899
Q ss_pred EEEecCh--hhhHHHHHHHHHHHHHHc
Q 006891 430 VTITGGK--WTTYRSMAEDAVNAAIKS 454 (627)
Q Consensus 430 ~~~~Gg~--~t~~~~~Ae~~~~~~~~~ 454 (627)
|.++|+. +|++|.+|+.+++++.+.
T Consensus 371 ~~a~G~~g~~~~ap~~a~~la~~i~~~ 397 (405)
T 3c4n_A 371 HLLLGGPLADTLGLAAAHELAQRVSAS 397 (405)
T ss_dssp EEEECCTTHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEccCcHHHHHHHHHHHHHHHHhCc
Confidence 9998864 899999999999999875
No 18
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.96 E-value=1.6e-28 Score=256.61 Aligned_cols=313 Identities=12% Similarity=0.069 Sum_probs=214.5
Q ss_pred cEEEECCChHHHHHHHHHHHCC------CeEEEEcCCCCCCCCcCCCCCcccchhhhhhhhhccCCcchHHHHHHHHHHH
Q 006891 73 DILVIGGGATGCGVALDAATRG------LRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEER 146 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G------~~V~lvEk~~~~~g~S~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~l~~~ 146 (627)
||+|||||++|+++|++|+++| ++|+|||++.+++++|++++|++++..... .......+..+.+.
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~aS~~~~g~~~~~~~~~------~~~~~~~~~~~~~~-- 73 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLTTTDVAAGLWQPYLSDP------NNPQEADWSQQTFD-- 73 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGSGGGTCCCBCCCCSSCC------SCTHHHHHHHHHHH--
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCCccccCcceeecccCCC------chHHHHHHHHHHHH--
Confidence 8999999999999999999998 999999999988999999999987632100 00011111111111
Q ss_pred HHHHHHCCCC-------cccCCCccccCCchhHHHHHHHHHHHHHhhcCCCCCCccccCHHHHHhhCCccccccccCCce
Q 006891 147 KQVIRNAPHL-------SNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAKDRSLK 219 (627)
Q Consensus 147 ~~~~~~~~~~-------~~~~~~~~p~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~l~~~~~~~~~p~l~~~~~~~~~~ 219 (627)
.+.+..... .......+..... + ..++. ..+.+ .++++.+++ ..+|.+ .
T Consensus 74 -~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~----------~~~~~-~~~~~-~~~l~~~e~-~~~p~~---------~ 129 (351)
T 3g3e_A 74 -YLLSHVHSPNAENLGLFLISGYNLFHEAI-P----------DPSWK-DTVLG-FRKLTPREL-DMFPDY---------G 129 (351)
T ss_dssp -HHHTTTTSTTHHHHTEEEEEEEEEESSCC-C----------CCGGG-GTSEE-EEECCHHHH-TTCTTC---------C
T ss_pred -HHHHHhhccCCCCccEEEEEEEEEecCCc-c----------ccCHH-HhCCC-ceECCHHHh-ccCCCC---------c
Confidence 111111110 0000000000000 0 01111 23433 778888887 455543 3
Q ss_pred EEEEecCceechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHH
Q 006891 220 GAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSV 299 (627)
Q Consensus 220 g~~~~~~g~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l 299 (627)
+++.+.+++++|..++..+.+.++++|++|++ ++|++|..++ .++||.||+|+|.|+..+
T Consensus 130 ~~~~~~~~~v~p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~-------------------~~~a~~VV~A~G~~s~~l 189 (351)
T 3g3e_A 130 YGWFHTSLILEGKNYLQWLTERLTERGVKFFQ-RKVESFEEVA-------------------REGADVIVNCTGVWAGAL 189 (351)
T ss_dssp EEEEEEEEEECHHHHHHHHHHHHHHTTCEEEE-CCCCCHHHHH-------------------HTTCSEEEECCGGGGGGT
T ss_pred eEEEecceEEcHHHHHHHHHHHHHHCCCEEEE-EEeCCHHHhh-------------------cCCCCEEEECCCcChHhh
Confidence 55555579999999999999999999999988 8887664321 156999999999999887
Q ss_pred hhhhcCCCCCceecCcceEEEecCCCCCCCcceeccc--CCCCcEEEEEecCCcEEEecCCCCCCCCCCCCCCHHHHHHH
Q 006891 300 RKLADQNVQPMICPSSGVHIVLPDYYSPEGMGLIVPK--TKDGRVVFMLPWLGRTVAGTTDSDTVITLLPEPHEDEIQFI 377 (627)
Q Consensus 300 ~~~~g~~~~~~i~p~kG~~lv~~~~~~~~~~~~~~~~--~~dg~~~~~~P~~g~~~iG~t~~~~~~~~~~~~~~~~~~~l 377 (627)
.+. .++.|.||++++++.+. ....++... ..+++.+|++|+.+.+++|++.+.. ..+..++++.++.+
T Consensus 190 ~~~------~~l~p~rg~~~~~~~~~--~~~~~~~~~~~~~~~~~~y~~p~~~~~~iGg~~~~~--~~~~~~~~~~~~~l 259 (351)
T 3g3e_A 190 QRD------PLLQPGRGQIMKVDAPW--MKHFILTHDPERGIYNSPYIIPGTQTVTLGGIFQLG--NWSELNNIQDHNTI 259 (351)
T ss_dssp SCC------TTCEEEEEEEEEEECTT--CCSEEEECCTTTCTTCSCEEEECSSCEEEECCCEET--CCCCSCCHHHHHHH
T ss_pred cCC------CceeecCCcEEEEeCCC--cceEEEeccccCCCCceeEEEeCCCcEEEeeeeecC--CCCCCCCHHHHHHH
Confidence 642 46899999999987532 122222110 1234568999988899999987653 23556789999999
Q ss_pred HHHHhhhcccCCCccceeeeeeeeeccccCCCCCCCCCCcccceeeec--CCCeEEEecC---hhhhHHHHHHHHHHHHH
Q 006891 378 LDAISDYLNVKVRRTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCED--FPGLVTITGG---KWTTYRSMAEDAVNAAI 452 (627)
Q Consensus 378 l~~~~~~~~~~l~~~~i~~~~aG~Rp~~~d~~~~~~~~~~r~~~i~~~--~~gl~~~~Gg---~~t~~~~~Ae~~~~~~~ 452 (627)
++.+.++| |.+...++.+.|+|+||.++| . . + ..++|+.. .+|++.++|. ++|+++.+|+.+++++.
T Consensus 260 ~~~~~~~~-P~l~~~~i~~~w~G~r~~t~D-~-p----~-~~~~ig~~~~~~~~~~~~G~~g~G~~~ap~~g~~la~li~ 331 (351)
T 3g3e_A 260 WEGCCRLE-PTLKNARIIGERTGFRPVRPQ-I-R----L-EREQLRTGPSNTEVIHNYGHGGYGLTIHWGCALEAAKLFG 331 (351)
T ss_dssp HHHHHHHC-GGGGGCEEEEEEEEEEEECSS-C-E----E-EEEEECCSSSCEEEEEEECCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhC-CCccCCcEeeeeEeeCCCCCC-c-c----c-eeeeccCCCCCCeEEEEeCCCcchHhhhHHHHHHHHHHHH
Confidence 99999999 888888899999999999987 2 0 0 11345543 3689999885 49999999999999998
Q ss_pred HcC
Q 006891 453 KSG 455 (627)
Q Consensus 453 ~~~ 455 (627)
+.+
T Consensus 332 ~~~ 334 (351)
T 3g3e_A 332 RIL 334 (351)
T ss_dssp HHH
T ss_pred HHH
Confidence 763
No 19
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.95 E-value=4.1e-27 Score=247.02 Aligned_cols=316 Identities=18% Similarity=0.105 Sum_probs=204.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCCCCcCCCCCcccchhhhhhhhhccCCcchHHHHHHHHHHHHHH
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQV 149 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~g~S~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 149 (627)
.++||+|||||++|+++|++|+++|++|+|||++.+++|+|+.++...+++.-.... ....+.....+..+.+.....
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g~s~~~~s~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~- 82 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDVSSQTFASPWAGANWTPFM-TLTDGPRQAKWEESTFKKWVE- 82 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCTTCTTSSGGGCCCBCCCCS-CTTTCHHHHHHHHHHHHHHHH-
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCcCCcCcccCcccccccCcc-cCCCchHHHHHHHHHHHHHHH-
Confidence 468999999999999999999999999999999988887655443333322110000 000011122222222222222
Q ss_pred HHHCCC-C-cccCCCccccCCchhHHHHHHHHHHHHHhhcCCCCCCccccCHHHHHhhCCccccccccCCceEEEEecCc
Q 006891 150 IRNAPH-L-SNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAKDRSLKGAVVYYDG 227 (627)
Q Consensus 150 ~~~~~~-~-~~~~~~~~p~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~l~~~~~~~~~p~l~~~~~~~~~~g~~~~~~g 227 (627)
.... . +.......-...... ...+++ ...+.+ .+.++.+++ |.. ..++.+.++
T Consensus 83 --~~~~~~g~~~~~~~~~~~~~~~--------~~~~~~-~~~g~~-~~~l~~~~~----p~~---------~~g~~~~~~ 137 (363)
T 1c0p_A 83 --LVPTGHAMWLKGTRRFAQNEDG--------LLGHWY-KDITPN-YRPLPSSEC----PPG---------AIGVTYDTL 137 (363)
T ss_dssp --HTTTTSSEEEEEEEEEESSGGG--------GGGGTT-TTTSTT-CEECCGGGS----STT---------CEEEEEEEE
T ss_pred --hCcccCCeEEECCEEEEecCcc--------chhHHH-HHhCCC-cEECCHHHC----CCc---------eEEEEEecc
Confidence 2111 0 000000000000000 111222 133433 566665543 322 234444788
Q ss_pred eechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhhcCCC
Q 006891 228 QMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQNV 307 (627)
Q Consensus 228 ~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~g~~~ 307 (627)
+++|..++..|.+.++++|++|+. ++|++|..+ . + +||.||+|+|.|+..+..+.
T Consensus 138 ~v~p~~~~~~l~~~~~~~G~~i~~-~~v~~l~~~-----------------~--~-~a~~VV~A~G~~s~~l~~~~---- 192 (363)
T 1c0p_A 138 SVHAPKYCQYLARELQKLGATFER-RTVTSLEQA-----------------F--D-GADLVVNATGLGAKSIAGID---- 192 (363)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEE-CCCSBGGGT-----------------C--S-SCSEEEECCGGGGGTSBTTC----
T ss_pred eecHHHHHHHHHHHHHHCCCEEEE-EEcccHhhc-----------------C--c-CCCEEEECCCcchhhccCcc----
Confidence 999999999999999999999988 888776321 0 1 68999999999998887642
Q ss_pred CCceecCcceEEEecCCCCCCCcceecccCCCCcEEEEEec-CCcEEEecCCCCCCCCCCCCCCHHHHHHHHHHHhhhcc
Q 006891 308 QPMICPSSGVHIVLPDYYSPEGMGLIVPKTKDGRVVFMLPW-LGRTVAGTTDSDTVITLLPEPHEDEIQFILDAISDYLN 386 (627)
Q Consensus 308 ~~~i~p~kG~~lv~~~~~~~~~~~~~~~~~~dg~~~~~~P~-~g~~~iG~t~~~~~~~~~~~~~~~~~~~ll~~~~~~~~ 386 (627)
..++.|.||+++.++... +.. . ++...++...|++|. +|.+++|++.+..+ .+..++++.++.+++.+.+++
T Consensus 193 ~~~~~p~rg~~~~~~~~~-~~~-~--~~~~~~~~~~y~~p~~~g~~~iG~t~~~~~--~~~~~~~~~~~~l~~~~~~~~- 265 (363)
T 1c0p_A 193 DQAAEPIRGQTVLVKSPC-KRC-T--MDSSDPASPAYIIPRPGGEVICGGTYGVGD--WDLSVNPETVQRILKHCLRLD- 265 (363)
T ss_dssp CTTEEEEEEEEEEEECCC-CCC-E--EECSCTTCCEEEEEETTTEEEEECCCEETC--CCCSCCHHHHHHHHHHHHHHC-
T ss_pred cCCccccCCeEEEEeCCc-ccc-e--EeeccCCCcEEEEEcCCCEEEEEeeeccCC--CCCCCCHHHHHHHHHHHHHhC-
Confidence 346999999999886543 211 1 111223233889997 47899999876532 356678899999999999999
Q ss_pred cCC------CccceeeeeeeeeccccCCCCCCCCCCcccceeeec-----------------------C--CCeEEEecC
Q 006891 387 VKV------RRTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCED-----------------------F--PGLVTITGG 435 (627)
Q Consensus 387 ~~l------~~~~i~~~~aG~Rp~~~d~~~~~~~~~~r~~~i~~~-----------------------~--~gl~~~~Gg 435 (627)
|.+ ...++++.|+|+||.++|. .|++... . +|++.++|.
T Consensus 266 P~l~~~~~~~~~~i~~~w~G~rp~t~d~----------~piig~~~~~~~~~~~~~~d~~~~~g~~p~~~~~~~~~a~G~ 335 (363)
T 1c0p_A 266 PTISSDGTIEGIEVLRHNVGLRPARRGG----------PRVEAERIVLPLDRTKSPLSLGRGSARAAKEKEVTLVHAYGF 335 (363)
T ss_dssp GGGSSSSSGGGCEEEEEEEEEEEEETTS----------CEEEEEEEEESCCTTTCTTCSSCTTCCCSCCEEEEEEEEECC
T ss_pred ccccCCcccccceEeeceEEECCCCCCC----------ceeEEEecccccccccCccccccccccccccccceEEEecCC
Confidence 777 4467999999999999883 5655431 1 578888875
Q ss_pred ---hhhhHHHHHHHHHHHHHHc
Q 006891 436 ---KWTTYRSMAEDAVNAAIKS 454 (627)
Q Consensus 436 ---~~t~~~~~Ae~~~~~~~~~ 454 (627)
++|.++++|+.+++++.+.
T Consensus 336 ~g~G~~~a~~~g~~~a~li~~~ 357 (363)
T 1c0p_A 336 SSAGYQQSWGAAEDVAQLVDEA 357 (363)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcchheeccHHHHHHHHHHHH
Confidence 4999999999999999876
No 20
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.67 E-value=8.4e-16 Score=162.52 Aligned_cols=212 Identities=17% Similarity=0.157 Sum_probs=122.4
Q ss_pred ceechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhhcCC
Q 006891 227 GQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQN 306 (627)
Q Consensus 227 g~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~g~~ 306 (627)
..++...+...|.+.+.+.|++++++++|+++..++ + +++||++.+ .++..+++||.||.|+|.++ .+++.++..
T Consensus 97 ~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-~-~v~gv~~~~--~~~~~~~~a~~vV~A~G~~s-~~~~~~g~~ 171 (397)
T 3cgv_A 97 YVLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN-G-KVAGAKIRH--NNEIVDVRAKMVIAADGFES-EFGRWAGLK 171 (397)
T ss_dssp EEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET-T-EEEEEEEEE--TTEEEEEEEEEEEECCCTTC-HHHHHHTCC
T ss_pred EEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeC-C-EEEEEEEEE--CCeEEEEEcCEEEECCCcch-HhHHhcCCC
Confidence 357788899999999999999999999999999876 5 888888864 34456899999999999999 788888765
Q ss_pred C-CC-ceecCcceEEEecC-CCCCCCcceecccCCCCcEEEEEecCC-cEEEecCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 006891 307 V-QP-MICPSSGVHIVLPD-YYSPEGMGLIVPKTKDGRVVFMLPWLG-RTVAGTTDSDTVITLLPEPHEDEIQFILDAIS 382 (627)
Q Consensus 307 ~-~~-~i~p~kG~~lv~~~-~~~~~~~~~~~~~~~dg~~~~~~P~~g-~~~iG~t~~~~~~~~~~~~~~~~~~~ll~~~~ 382 (627)
. .. +.....+....++. ...+....+.+.....+..+|++|..+ ...+|.+..... ..........++...
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~-----~~~~~~~~~~l~~~~ 246 (397)
T 3cgv_A 172 SVILARNDIISALQYRMINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSINW-----IHNRFELKNYLDRFI 246 (397)
T ss_dssp TTCCCGGGEEEEEEEEEESCCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEETTT-----CSCHHHHHHHHHHHH
T ss_pred ccCCChhheeEEEEEEeccCCCCCCcEEEEeCCcCCCceEEEEECCCCeEEEEEEecccc-----ccCCCCHHHHHHHHH
Confidence 3 11 11111122223322 222221122221113456788999754 556665543211 122334444444443
Q ss_pred hhcccCCCccceeeeeeeeeccccCCCCCCCCCCcccceeee-cCCCeEEE-ecChhhhHHHHHHHHHHHHHHc
Q 006891 383 DYLNVKVRRTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCE-DFPGLVTI-TGGKWTTYRSMAEDAVNAAIKS 454 (627)
Q Consensus 383 ~~~~~~l~~~~i~~~~aG~Rp~~~d~~~~~~~~~~r~~~i~~-~~~gl~~~-~Gg~~t~~~~~Ae~~~~~~~~~ 454 (627)
+.+ +.+....+...|.|..|+.... .....+.++.. +..++++- +|.++.++..-|..+++.+.+.
T Consensus 247 ~~~-~~~~~~~~~~~~~~~~p~~~~~-----~~~~~~~v~liGDAa~~~~P~~G~G~~~a~~~a~~la~~l~~~ 314 (397)
T 3cgv_A 247 ENH-PGLKKGQDIQLVTGGVSVSKVK-----MPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEA 314 (397)
T ss_dssp HTC-HHHHTSEEEEEEEEEEECCCCC-----SCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred HhC-cCCCCCeEEeeeeeeeecCCCc-----cceeeCCEEEEEccccCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 333 3344556788899998874221 11111222222 22333333 3334666666666666655543
No 21
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.63 E-value=4.7e-15 Score=162.09 Aligned_cols=202 Identities=21% Similarity=0.208 Sum_probs=117.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCCCCcCCCCCcccc--hhhhhhhhhccCCcchHHHHHHHHHHH
Q 006891 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHG--GVRYLEKAVFNLDYGQLKLVFHALEER 146 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~g~S~~~~~~i~~--g~~~~~~~~~~~~~~~~~~~~~~l~~~ 146 (627)
+.+|||||||+|++|+++|+.|+++|++|+||||.+..+|+|..+.|.++. +..+....... .......+.+.
T Consensus 39 ~~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~s~~s~G~~~~~~~~~~~~~~g~~---ds~~~~~~~~~-- 113 (510)
T 4at0_A 39 DYEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGATALAGGFIYLGGGTPLQKACGFD---DSPENMKTFMM-- 113 (510)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGSCCCEECCSSCHHHHHTTCC---CCHHHHHHHHH--
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcchhcCcceecCCCCHHHHHhCCC---CCHHHHHHHHH--
Confidence 346999999999999999999999999999999999888899888887653 33333221111 11221111111
Q ss_pred HHHHHHCCCCcccCCCccccCCchhHHHHHHHHHHHHHhhcCCCCCCccc----------------cCHHHHHhhCCccc
Q 006891 147 KQVIRNAPHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRY----------------YSAQESAELFPTLA 210 (627)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~----------------l~~~~~~~~~p~l~ 210 (627)
........+ .....+........+++. ..|++.... ....+. .+|...
T Consensus 114 ----~~~~~~~~~---------~~~~~~~~~~~~~i~~l~-~~Gv~~~~~~~~~~~~~~~~~~~~~~~g~e~--~~~~~~ 177 (510)
T 4at0_A 114 ----AALGPGADE---------EKITDYCEGSVEHYNWLV-DCGVPFKESFWGEPGWEPPFDDGLMYSGGEN--AAPFNE 177 (510)
T ss_dssp ----HHSCSSCCH---------HHHHHHHHTHHHHHHHHH-HTTCCCCSCEECSSSSSCSSSCSEECCSSTT--STTGGG
T ss_pred ----HHhCCCCCH---------HHHHHHHHhhHHHHHHHH-HcCCeecccccCCcccccCCcccccccCccc--cccccc
Confidence 111111100 000111111223334443 223321100 000000 000000
Q ss_pred cccccCCceEEEEe-c----CceechH-HHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEE
Q 006891 211 MKAKDRSLKGAVVY-Y----DGQMNDS-RLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTY 284 (627)
Q Consensus 211 ~~~~~~~~~g~~~~-~----~g~~~~~-~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~ 284 (627)
..........+ . .+..... .++..|.+.+++.|++|+++++|++|+.+++| +|+||++.+ +++..+|+
T Consensus 178 ---~~~~~~r~~~~~~~~~~~g~~~g~~~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g-~v~GV~~~~--~g~~~~i~ 251 (510)
T 4at0_A 178 ---IAAPAPRGHVPQMDGKRTGEKGGGYMLMKPLVETAEKLGVRAEYDMRVQTLVTDDTG-RVVGIVAKQ--YGKEVAVR 251 (510)
T ss_dssp ---TSCCCCCEECCCCSSCBTTTBCTTHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTC-CEEEEEEEE--TTEEEEEE
T ss_pred ---ccCcccceeeecccccccccCCCHHHHHHHHHHHHHHcCCEEEecCEeEEEEECCCC-cEEEEEEEE--CCcEEEEE
Confidence 00000001111 0 2333444 78999999999999999999999999998557 999999875 45556899
Q ss_pred c-CeEEeccCCChH
Q 006891 285 A-KVVVNAAGPFCD 297 (627)
Q Consensus 285 A-~~VV~AtG~~s~ 297 (627)
| |.||+|||+|+.
T Consensus 252 A~k~VVlAtGG~~~ 265 (510)
T 4at0_A 252 ARRGVVLATGSFAY 265 (510)
T ss_dssp EEEEEEECCCCCTT
T ss_pred eCCeEEEeCCChhh
Confidence 9 599999999984
No 22
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.61 E-value=3e-14 Score=157.67 Aligned_cols=197 Identities=16% Similarity=0.145 Sum_probs=122.4
Q ss_pred CCCCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCCCCcCCCCCcccchhhhhhhhhccCCcchHHHHHHHHHHHH
Q 006891 68 NSNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERK 147 (627)
Q Consensus 68 ~~~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~g~S~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~ 147 (627)
++.++||||||||++|+++|+.|+++|++|+||||.+..+|+|..+++.++........... . .......++.+
T Consensus 118 ~~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g-~-~ds~~~~~~~~---- 191 (566)
T 1qo8_A 118 PSETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHG-V-EDKVEWFIEDA---- 191 (566)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTT-C-CCCHHHHHHHH----
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhC-C-CCCHHHHHHHH----
Confidence 35679999999999999999999999999999999988788888777766532221111000 0 01111111111
Q ss_pred HHHHHCCCCcccCCCccccCCchhHHHHHHHHHHHHHhhcCCCCCCccccCHHHHHhhCCccccccccCCceEEEEecCc
Q 006891 148 QVIRNAPHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAKDRSLKGAVVYYDG 227 (627)
Q Consensus 148 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~l~~~~~~~~~p~l~~~~~~~~~~g~~~~~~g 227 (627)
.........+ .....+........+++. ..|++ +..+. .+.. ......+.+.++
T Consensus 192 --~~~~~~~~~~---------~~~~~~~~~~~~~i~~l~-~~Gv~-~~~~~------~~~g-------~~~~r~~~~~~~ 245 (566)
T 1qo8_A 192 --MKGGRQQNDI---------KLVTILAEQSADGVQWLE-SLGAN-LDDLK------RSGG-------ARVDRTHRPHGG 245 (566)
T ss_dssp --HHHTTTCSCH---------HHHHHHHHHHHHHHHHHH-HTTCC-CCEEE------CCTT-------CSSCCEEECSSS
T ss_pred --HHhcCCCCCH---------HHHHHHHhccHHHHHHHH-hcCCc-ccccc------ccCC-------CCCCceeecCCC
Confidence 1111111000 000111112223344553 33554 21111 0000 111122334456
Q ss_pred eechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHH
Q 006891 228 QMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDS 298 (627)
Q Consensus 228 ~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~ 298 (627)
.+++..++..|.+.+++.|++|+++++|++|+.+++| +|+||++.+ .+|+...++||.||+|||+|+..
T Consensus 246 ~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g-~v~Gv~~~~-~~g~~~~i~A~~VVlAtGg~s~~ 314 (566)
T 1qo8_A 246 KSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDH-SVVGAVVHG-KHTGYYMIGAKSVVLATGGYGMN 314 (566)
T ss_dssp SCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTS-BEEEEEEEE-TTTEEEEEEEEEEEECCCCCTTC
T ss_pred CCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCC-cEEEEEEEe-CCCcEEEEEcCEEEEecCCcccC
Confidence 6778889999999999999999999999999987646 899999975 45665689999999999999854
No 23
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.61 E-value=2e-14 Score=151.52 Aligned_cols=165 Identities=19% Similarity=0.222 Sum_probs=98.9
Q ss_pred eechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhhcCCC
Q 006891 228 QMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQNV 307 (627)
Q Consensus 228 ~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~g~~~ 307 (627)
.++...+...|.+.|.+.|++++++++|+++..++ + +++++.... +++..+++||.||.|.|.+| .+++.++...
T Consensus 98 ~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~-~-~~~~v~~~~--~~~~~~~~a~~vIgAdG~~S-~vr~~~g~~~ 172 (397)
T 3oz2_A 98 VLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN-G-KVAGAKIRH--NNEIVDVRAKMVIAADGFES-EFGRWAGLKS 172 (397)
T ss_dssp EECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET-T-EEEEEEEEE--TTEEEEEEEEEEEECCCTTC-HHHHHHTCGG
T ss_pred EEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeecc-c-eeeeeeecc--cccceEEEEeEEEeCCcccc-HHHHHcCCCc
Confidence 46677888899999999999999999999999877 5 788877654 55667899999999999998 6777776542
Q ss_pred CCceecCcceEE-----EecCCCCCCCcceecccCCCCcEEEEEecC-CcEEEecCCCCCCCCCCCCCCHHHHHHHHHHH
Q 006891 308 QPMICPSSGVHI-----VLPDYYSPEGMGLIVPKTKDGRVVFMLPWL-GRTVAGTTDSDTVITLLPEPHEDEIQFILDAI 381 (627)
Q Consensus 308 ~~~i~p~kG~~l-----v~~~~~~~~~~~~~~~~~~dg~~~~~~P~~-g~~~iG~t~~~~~~~~~~~~~~~~~~~ll~~~ 381 (627)
. ..+...... .......+....+.+.....+...|++|.. +...+|..... +...........++..
T Consensus 173 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~~~~~-----~~~~~~~~~~~~l~~~ 245 (397)
T 3oz2_A 173 V--ILARNDIISALQYRMINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSI-----NWIHNRFELKNYLDRF 245 (397)
T ss_dssp G--CCCGGGEEEEEEEEEESCCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEET-----TTSCSHHHHHHHHHHH
T ss_pred c--cccceeeeeeEEEEeeccccCcccceeeeeccCCCceEEEeecccceeEEEEeecc-----chhhhhhhHHHHHHHH
Confidence 1 122222211 112222222112222212334456777865 44444432211 1112244455555554
Q ss_pred hhhcccCCCccceeeeeeeeeccc
Q 006891 382 SDYLNVKVRRTDVLSAWSGIRPLA 405 (627)
Q Consensus 382 ~~~~~~~l~~~~i~~~~aG~Rp~~ 405 (627)
.+.. |.+.....+..+.|..|..
T Consensus 246 ~~~~-~~l~~~~~~~~~~~~~~~~ 268 (397)
T 3oz2_A 246 IENH-PGLKKGQDIQLVTGGVSVS 268 (397)
T ss_dssp HHTC-HHHHTSEEEEEEEEEEECC
T ss_pred HHhC-ccccccceeeeeecccccc
Confidence 4444 4444455667777777764
No 24
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.60 E-value=4.4e-15 Score=158.40 Aligned_cols=76 Identities=17% Similarity=0.189 Sum_probs=61.5
Q ss_pred ceechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhhcCC
Q 006891 227 GQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQN 306 (627)
Q Consensus 227 g~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~g~~ 306 (627)
..+++..+...|.+.+.+.|++++++++|+++..++++ .+ |.+.+ .+|+..+++||.||+|+|.++ .+++.++.+
T Consensus 101 ~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~-~~--v~v~~-~~g~~~~~~a~~vV~A~G~~s-~l~~~~g~~ 175 (421)
T 3nix_A 101 WQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTD-SV--TTIED-INGNKREIEARFIIDASGYGR-VIPRMFGLD 175 (421)
T ss_dssp EECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTE-EE--EEEEE-TTSCEEEEEEEEEEECCGGGC-HHHHHTTCE
T ss_pred eEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE-EE--EEEEc-CCCCEEEEEcCEEEECCCCch-hhHHhcCCC
Confidence 45788899999999999999999999999999987654 33 44443 456656899999999999998 777777765
Q ss_pred C
Q 006891 307 V 307 (627)
Q Consensus 307 ~ 307 (627)
.
T Consensus 176 ~ 176 (421)
T 3nix_A 176 K 176 (421)
T ss_dssp E
T ss_pred C
Confidence 3
No 25
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.59 E-value=4.3e-14 Score=156.69 Aligned_cols=194 Identities=17% Similarity=0.228 Sum_probs=120.0
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCCCCcCCCCCcccchhh-hhhhhhccCCcchHHHHHHHHHHHH
Q 006891 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVR-YLEKAVFNLDYGQLKLVFHALEERK 147 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~g~S~~~~~~i~~g~~-~~~~~~~~~~~~~~~~~~~~l~~~~ 147 (627)
+.++||||||||++|+++|+.|+++|++|+||||.+..+|+|..+.+.+..... .+...... ....... ...
T Consensus 124 ~~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~---ds~~~~~---~~~- 196 (571)
T 1y0p_A 124 HDTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKIT---DSPELMF---EDT- 196 (571)
T ss_dssp SEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCC---CCHHHHH---HHH-
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCC---CCHHHHH---HHH-
Confidence 456999999999999999999999999999999998777787777665542221 11111001 1111111 110
Q ss_pred HHHHHCCCCcccCCCccccCCchhHHHHHHHHHHHHHhhcCCCCCCccccCHHHHHhhCCccccccccCCceEEEEecCc
Q 006891 148 QVIRNAPHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAKDRSLKGAVVYYDG 227 (627)
Q Consensus 148 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~l~~~~~~~~~p~l~~~~~~~~~~g~~~~~~g 227 (627)
+........+ .....+........+++. ..|++... +. .++ .......+.+.++
T Consensus 197 --~~~g~~~~~~---------~~~~~~~~~~~~~~~~l~-~~Gv~~~~-~~------~~~-------g~~~~r~~~~~~g 250 (571)
T 1y0p_A 197 --MKGGQNINDP---------ALVKVLSSHSKDSVDWMT-AMGADLTD-VG------MMG-------GASVNRAHRPTGG 250 (571)
T ss_dssp --HHHTTTCSCH---------HHHHHHHHHHHHHHHHHH-HTTCCCCE-EE------CCT-------TCSSCCEEESTTT
T ss_pred --HHhcCCCCCH---------HHHHHHHHccHHHHHHHH-hcCCCCcc-Cc------ccC-------CcCCCeeEecCCC
Confidence 1111100000 000111112223344553 24544211 10 000 0111223334456
Q ss_pred eechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChH
Q 006891 228 QMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 297 (627)
Q Consensus 228 ~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~ 297 (627)
...+..+...|.+.+++.|++|+++++|++|+.+++| +|+||++.+ .+|+...|+||.||+|||.|+.
T Consensus 251 ~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g-~v~Gv~~~~-~~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 251 AGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKG-TVKGILVKG-MYKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp CCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECTTS-CEEEEEEEE-TTTEEEEEECSEEEECCCCCTT
T ss_pred CCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCC-eEEEEEEEe-CCCcEEEEECCeEEEeCCCccc
Confidence 6677889999999999999999999999999987646 899999875 4566668999999999999985
No 26
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.54 E-value=6.3e-14 Score=156.48 Aligned_cols=201 Identities=15% Similarity=0.155 Sum_probs=113.9
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCCCCcCCCCCcccchhhhhhhhhccCCcchHHH-HHHHHHHHH
Q 006891 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKL-VFHALEERK 147 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~g~S~~~~~~i~~g~~~~~~~~~~~~~~~~~~-~~~~l~~~~ 147 (627)
+.++||||||||++|+++|++|+++|++|+||||..+..|.|..++|.+.......... . ..+... +.+.+
T Consensus 3 ~~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~g-~---~ds~~~~~~dt~---- 74 (660)
T 2bs2_A 3 VQYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSAAAQGGMQASLGNSKMS-D---GDNEDLHFMDTV---- 74 (660)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGGGSGGGGCCSCEECCCCCSGGG-T---TCCHHHHHHHHH----
T ss_pred cccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCCCCcccccCCCeEeccCCcccC-C---CCCHHHHHHHHH----
Confidence 44689999999999999999999999999999999876566655544433222111000 0 011111 11111
Q ss_pred HHHHHCCCCcccCCCccccCCchhHHHHHHHHHHHHHhhcCCCCCC----------------ccccCHHHHHhhCCcccc
Q 006891 148 QVIRNAPHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHL----------------SRYYSAQESAELFPTLAM 211 (627)
Q Consensus 148 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~l~~~~g~~~----------------~~~l~~~~~~~~~p~l~~ 211 (627)
.....++.+ .....+...+....+++. ..|++. .++++++++...++.-
T Consensus 75 ---~~g~~~~d~---------~~v~~~~~~s~~~i~~L~-~~Gv~f~~~~~G~~~~~~~g~~~~~l~~~e~~~~~~~~-- 139 (660)
T 2bs2_A 75 ---KGSDWGCDQ---------KVARMFVNTAPKAIRELA-AWGVPWTRIHKGDRMAIINAQKTTITEEDFRHGLIHSR-- 139 (660)
T ss_dssp ---HHTTTCSCH---------HHHHHHHHHHHHHHHHHH-HTTCCCCBCCSEEEECCCSSCCCEEEECGGGTTSBCCB--
T ss_pred ---HhcCCCCCH---------HHHHHHHHHHHHHHHHHH-HcCCCceecCCCcccccccccccccccchhhhhhhccc--
Confidence 111111110 000111111222333442 233331 1223333322211100
Q ss_pred ccccCC--ceEEEEecCceechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEE
Q 006891 212 KAKDRS--LKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVV 289 (627)
Q Consensus 212 ~~~~~~--~~g~~~~~~g~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV 289 (627)
.... ..... + .+...+..++..|.+.+.+.|++|+++++|++|+.++ | +|+||.+.+..+|+...++||.||
T Consensus 140 --~~gg~~~~R~~-~-~~d~tG~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~-g-~v~Gv~~~~~~~G~~~~i~A~~VV 213 (660)
T 2bs2_A 140 --DFGGTKKWRTC-Y-TADATGHTMLFAVANECLKLGVSIQDRKEAIALIHQD-G-KCYGAVVRDLVTGDIIAYVAKGTL 213 (660)
T ss_dssp --CCTTCSSCCEE-C-STTCHHHHHHHHHHHHHHHHTCEEECSEEEEEEEEET-T-EEEEEEEEETTTCCEEEEECSEEE
T ss_pred --cccccccceeE-e-eCCCCHHHHHHHHHHHHHhCCCEEEECcEEEEEEecC-C-EEEEEEEEECCCCcEEEEEcCEEE
Confidence 0000 00000 1 1112245788999999999999999999999999865 6 899999876456766679999999
Q ss_pred eccCCChHH
Q 006891 290 NAAGPFCDS 298 (627)
Q Consensus 290 ~AtG~~s~~ 298 (627)
+|||+|+..
T Consensus 214 lATGG~~~~ 222 (660)
T 2bs2_A 214 IATGGYGRI 222 (660)
T ss_dssp ECCCCCGGG
T ss_pred EccCcchhh
Confidence 999999854
No 27
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.53 E-value=6.7e-14 Score=154.99 Aligned_cols=203 Identities=12% Similarity=0.070 Sum_probs=113.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCCCCcCCCCCcccchhhhhhhhhccCCcchHHH-HHHHHHHHH
Q 006891 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKL-VFHALEERK 147 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~g~S~~~~~~i~~g~~~~~~~~~~~~~~~~~~-~~~~l~~~~ 147 (627)
+.++||||||||++|+++|+.|+++|++|+||||....+|.|..++|.+....... ....... +.+.+
T Consensus 5 ~~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~-------~~ds~~~~~~d~~---- 73 (588)
T 2wdq_A 5 VREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNT-------HEDNWEWHMYDTV---- 73 (588)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSS-------SCCCHHHHHHHHH----
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcchhhCCccEEcCCCC-------CCCCHHHHHHHHH----
Confidence 45689999999999999999999999999999999876555555544332211100 0011111 11111
Q ss_pred HHHHHCCCCcccCCCccccCCchhHHHHHHHHHHHHHhhcCCCCCCccccCHHHHH-hhCCccccccccCCceEEEEecC
Q 006891 148 QVIRNAPHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESA-ELFPTLAMKAKDRSLKGAVVYYD 226 (627)
Q Consensus 148 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~l~~~~~~-~~~p~l~~~~~~~~~~g~~~~~~ 226 (627)
.....++.+ ..-..+........+++. ..|++ +.......+. ..++..............++..+
T Consensus 74 ---~~g~~~~d~---------~~v~~~~~~~~~~i~~l~-~~Gv~-f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~d 139 (588)
T 2wdq_A 74 ---KGSDYIGDQ---------DAIEYMCKTGPEAILELE-HMGLP-FSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAAD 139 (588)
T ss_dssp ---HHTTTCSCH---------HHHHHHHHHHHHHHHHHH-HTTCC-CCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTT
T ss_pred ---HhcCCCCCH---------HHHHHHHHhHHHHHHHHH-HcCCC-cccCCCCcEeeeecCCccccccccCcceEEEcCC
Confidence 111111100 000111111223334443 34554 2211110000 00111000000000111111111
Q ss_pred ceechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHH
Q 006891 227 GQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSV 299 (627)
Q Consensus 227 g~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l 299 (627)
..+..++..|.+.+++.|++|+++++|++|+.+++| +|+||.+.+..+|+...+.||.||+|||+|+...
T Consensus 140 --~~g~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g-~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~y 209 (588)
T 2wdq_A 140 --RTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDG-AVVGCTALCIETGEVVYFKARATVLATGGAGRIY 209 (588)
T ss_dssp --CHHHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTS-CEEEEEEEETTTCCEEEEEEEEEEECCCCCGGGS
T ss_pred --CCHHHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCC-EEEEEEEEEcCCCeEEEEEcCEEEECCCCCcccc
Confidence 235788899999999999999999999999986446 8999998764566666899999999999998653
No 28
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.51 E-value=1.7e-13 Score=149.93 Aligned_cols=74 Identities=27% Similarity=0.393 Sum_probs=62.4
Q ss_pred eechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhhcC
Q 006891 228 QMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQ 305 (627)
Q Consensus 228 ~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~g~ 305 (627)
.++...+...|.+.+.+.|++++++++|+++..++ + +++||++.+ .+|+..+++||.||.|+|.++ .+++.++.
T Consensus 107 ~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~-~-~v~gv~~~~-~dG~~~~i~ad~VI~AdG~~S-~vr~~lg~ 180 (512)
T 3e1t_A 107 QVERARFDDMLLRNSERKGVDVRERHEVIDVLFEG-E-RAVGVRYRN-TEGVELMAHARFIVDASGNRT-RVSQAVGE 180 (512)
T ss_dssp BCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEET-T-EEEEEEEEC-SSSCEEEEEEEEEEECCCTTC-SSGGGTCC
T ss_pred EecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEEC-C-EEEEEEEEe-CCCCEEEEEcCEEEECCCcch-HHHHHcCC
Confidence 46778899999999999999999999999999876 5 888998876 456556899999999999998 56666554
No 29
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.49 E-value=2.1e-13 Score=151.27 Aligned_cols=196 Identities=11% Similarity=0.037 Sum_probs=113.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCCCCcCCCCCcccchhhhhhhhhccCCcchHHHH-HHHHHHHHH
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLV-FHALEERKQ 148 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~g~S~~~~~~i~~g~~~~~~~~~~~~~~~~~~~-~~~l~~~~~ 148 (627)
.++||||||||++|+++|+.|+++|++|+||||.....+.|..+.|.+....... ...++... .+.+
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~-------~~ds~~~~~~dtl----- 84 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNM-------EDDNWRWHFYDTV----- 84 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSS-------SCCCHHHHHHHHH-----
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCchhhCCCcEecCCCC-------CCCCHHHHHHHHH-----
Confidence 4589999999999999999999999999999999776666655544433211100 01122111 1111
Q ss_pred HHHHCCCCcccCCCccccCCchhHHHHHHHHHHHHHhhcCCCCCCccccCHHHHH-hhCCccccccccC-----CceEEE
Q 006891 149 VIRNAPHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESA-ELFPTLAMKAKDR-----SLKGAV 222 (627)
Q Consensus 149 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~l~~~~~~-~~~p~l~~~~~~~-----~~~g~~ 222 (627)
.....+..+ ..-..+........+++. ..|++ +.......+. ..++.. ... .....+
T Consensus 85 --~~g~~l~d~---------~~v~~l~~~s~~~i~~L~-~~Gv~-f~~~~~g~~~~~~~gg~----s~~~g~~~~~~R~~ 147 (621)
T 2h88_A 85 --KGSDWLGDQ---------DAIHYMTEQAPAAVIELE-NYGMP-FSRTEEGKIYQRAFGGQ----SLQFGKGGQAHRCC 147 (621)
T ss_dssp --HHTTTCSCH---------HHHHHHHHHHHHHHHHHH-HTTCC-CCBCTTSSBCEECCTTC----BSTTTTSCBCCCEE
T ss_pred --HhcCCCCCH---------HHHHHHHHHHHHHHHHHH-HcCCC-cccCCCCceeccccCcc----cccccCCCcceeEE
Confidence 111111110 000011112223334443 34554 2211110000 011111 000 000111
Q ss_pred EecCceechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHH
Q 006891 223 VYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDS 298 (627)
Q Consensus 223 ~~~~g~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~ 298 (627)
+. +......++..|.+.+.+.|++|+++++|++|+.++ | +|+||++.+..+|+...+.|+.||+|||+|+..
T Consensus 148 -~~-~d~tG~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~-g-~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 148 -CV-ADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMEN-G-ECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp -CS-TTCHHHHHHHHHHHHHTTSCCEEEETEEEEEEEEET-T-EEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred -Ee-cCCCHHHHHHHHHHHHHhCCCEEEEceEEEEEEEEC-C-EEEEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 11 112346788899999999999999999999999865 6 999999876456766789999999999999854
No 30
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.48 E-value=3.1e-12 Score=137.66 Aligned_cols=77 Identities=23% Similarity=0.261 Sum_probs=63.1
Q ss_pred ceechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhhcCC
Q 006891 227 GQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQN 306 (627)
Q Consensus 227 g~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~g~~ 306 (627)
..++...+...|.+.+.+.|++++++++|+++..++ + +++||++.+..+|+..+++||.||.|+|.++ .+++.++..
T Consensus 95 ~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~-~-~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s-~vr~~l~~~ 171 (453)
T 3atr_A 95 FELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFED-G-YVKGAVLFNRRTNEELTVYSKVVVEATGYSR-SFRSKLPPE 171 (453)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEET-T-EEEEEEEEETTTTEEEEEECSEEEECCGGGC-TTGGGSCTT
T ss_pred EEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEEC-C-EEEEEEEEEcCCCceEEEEcCEEEECcCCch-hhHHhcCCC
Confidence 356788899999999999999999999999999876 5 7888888752156556899999999999998 477766654
No 31
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.47 E-value=6.4e-13 Score=145.39 Aligned_cols=199 Identities=12% Similarity=0.046 Sum_probs=112.0
Q ss_pred ceechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhhcCC
Q 006891 227 GQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQN 306 (627)
Q Consensus 227 g~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~g~~ 306 (627)
..+++..+...|.+.+.+.|++++++ +|+++..+++| .+++|++. +|+ +++||.||.|+|.++..+.+.+|..
T Consensus 168 ~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~-~~~~v~~~---~g~--~~~ad~vV~A~G~~S~~~~~~~g~~ 240 (511)
T 2weu_A 168 YHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERG-WISGVHTK---QHG--EISGDLFVDCTGFRGLLINQTLGGR 240 (511)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTS-CEEEEEES---SSC--EEECSEEEECCGGGCCCCCCCTCCC
T ss_pred EEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCC-CEEEEEEC---CCC--EEEcCEEEECCCcchHHHHHHhCCC
Confidence 45788999999999999999999999 99999986656 77777663 353 7999999999999996556666543
Q ss_pred CC--CceecCcceE-EEecCCCCCCCcceecccCCCCcEEEEEecCCcEEEecCCCCCCCCCCCCCCHHHHH-HHHHHHh
Q 006891 307 VQ--PMICPSSGVH-IVLPDYYSPEGMGLIVPKTKDGRVVFMLPWLGRTVAGTTDSDTVITLLPEPHEDEIQ-FILDAIS 382 (627)
Q Consensus 307 ~~--~~i~p~kG~~-lv~~~~~~~~~~~~~~~~~~dg~~~~~~P~~g~~~iG~t~~~~~~~~~~~~~~~~~~-~ll~~~~ 382 (627)
.. ....|..... +.++....+...+........+..+|++|..+...+|..... + ..++++.. .+.+.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~g~~~~~-----~-~~~~~~~~~~l~~~~- 313 (511)
T 2weu_A 241 FQSFSDVLPNNRAVALRVPRENDEDMRPYTTATAMSAGWMWTIPLFKRDGNGYVYSD-----E-FISPEEAERELRSTV- 313 (511)
T ss_dssp EEECTTTCCCCEEEEEEEECSSGGGCCSSEEEEEETTEEEEEEECSSEEEEEEEECT-----T-TSCHHHHHHHHHHHH-
T ss_pred CccccccCcccceEEEEeccCCCCCCCcceeceecCCCcEEEEECCCceEEEEEECC-----C-CCCHHHHHHHHHHHh-
Confidence 10 0122333222 222211110011111110112346888998776666654321 1 12333333 333332
Q ss_pred hhcccCCCccceeeeeeeeeccccCCCCCCCCCCcccceeeecCCCeEEE-ecChhhhHHHHHHHHHHH
Q 006891 383 DYLNVKVRRTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCEDFPGLVTI-TGGKWTTYRSMAEDAVNA 450 (627)
Q Consensus 383 ~~~~~~l~~~~i~~~~aG~Rp~~~d~~~~~~~~~~r~~~i~~~~~gl~~~-~Gg~~t~~~~~Ae~~~~~ 450 (627)
... |.+....++..|.|.++....+ |-.+|+ +..+++.- .|.+++++..-|..+++.
T Consensus 314 ~~~-~~~~~~~~~~~~~~~~~~~~~~---------rv~liG-DAAh~~~P~~g~G~~~a~~da~~La~~ 371 (511)
T 2weu_A 314 APG-RDDLEANHIQMRIGRNERTWIN---------NCVAVG-LSAAFVEPLESTGIFFIQHAIEQLVKH 371 (511)
T ss_dssp CTT-CTTSCCEEEECCCEEESCSEET---------TEEECG-GGTEECCGGGCCHHHHHHHHHHHHHHT
T ss_pred Ccc-cccccceeEEeeccccccccCC---------CEEEEe-chhhccCccccccHHHHHHHHHHHHHH
Confidence 222 3454555677788877654321 222333 23344333 344577777666665554
No 32
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.47 E-value=1.2e-12 Score=144.78 Aligned_cols=195 Identities=16% Similarity=0.194 Sum_probs=116.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCCCCcCCCCCcccchh-hhhhhhhccCCcchHHHHHHHHHHHH
Q 006891 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGV-RYLEKAVFNLDYGQLKLVFHALEERK 147 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~g~S~~~~~~i~~g~-~~~~~~~~~~~~~~~~~~~~~l~~~~ 147 (627)
..++||+|||+|++|+++|+.|+++|++|+||||.+..+|.+..+++.+.... ......... .......+.+.
T Consensus 124 ~~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~---ds~~~~~~~~~--- 197 (572)
T 1d4d_A 124 KETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIE---DKKQIMIDDTM--- 197 (572)
T ss_dssp CEECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCC---CCTHHHHHHHH---
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCC---CCHHHHHHHHH---
Confidence 34689999999999999999999999999999999877777777766554221 111111011 11111111111
Q ss_pred HHHHHCCCCcccCCCccccCCchhHHHHHHHHHHHHHhhcCCCCCCccccCHHHHHhhCCccccccccCCceEEEEecCc
Q 006891 148 QVIRNAPHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAKDRSLKGAVVYYDG 227 (627)
Q Consensus 148 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~l~~~~~~~~~p~l~~~~~~~~~~g~~~~~~g 227 (627)
........+ .....+........+++. ..|++ +..+. .+. .......+.+.++
T Consensus 198 ---~~g~~~~~~---------~~v~~~~~~~~~~i~~l~-~~Gv~-~~~~~------~~g-------g~~~~r~~~~~~~ 250 (572)
T 1d4d_A 198 ---KGGRNINDP---------ELVKVLANNSSDSIDWLT-SMGAD-MTDVG------RMG-------GASVNRSHRPTGG 250 (572)
T ss_dssp ---HHTTTCSCH---------HHHHHHHHTHHHHHHHHH-HHTCC-CCEEE------CCT-------TCSSCCEEESTTT
T ss_pred ---HhcCCCCCH---------HHHHHHHHccHHHHHHHH-hcCCc-ccccc------ccC-------CCcCCeeEecCCC
Confidence 111111000 000011111122334443 22443 11110 000 0111112233445
Q ss_pred eechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHH
Q 006891 228 QMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDS 298 (627)
Q Consensus 228 ~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~ 298 (627)
......++..|.+.+++.|++|+++++|++|+.+++| +|+||++.+ .+|+...|.||.||+|||+|+.+
T Consensus 251 ~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g-~v~GV~~~~-~~G~~~~i~A~~VVlAtGg~~~~ 319 (572)
T 1d4d_A 251 AGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILEDASG-KVTGVLVKG-EYTGYYVIKADAVVIAAGGFAKN 319 (572)
T ss_dssp CCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC--C-CEEEEEEEE-TTTEEEEEECSEEEECCCCCTTC
T ss_pred CCCHHHHHHHHHHHHHHcCCeEEecCEEEEEEECCCC-eEEEEEEEe-CCCcEEEEEcCEEEEeCCCCccC
Confidence 5567788999999999999999999999999987536 899999975 45666689999999999999853
No 33
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.47 E-value=1.3e-13 Score=152.45 Aligned_cols=75 Identities=15% Similarity=0.155 Sum_probs=61.4
Q ss_pred ceechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhhcCC
Q 006891 227 GQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQN 306 (627)
Q Consensus 227 g~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~g~~ 306 (627)
..++...+...|.+.+++.|++++++++|+++..++ + .+++|++.+ +|+..+++||.||.|+|.++ .+++.++..
T Consensus 123 ~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~-g-~~~~V~~~~--~G~~~~i~AdlVV~AdG~~S-~lr~~lg~~ 197 (591)
T 3i3l_A 123 VQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSD-P-DRVVLTVRR--GGESVTVESDFVIDAGGSGG-PISRKLGVR 197 (591)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCS-T-TCEEEEEEE--TTEEEEEEESEEEECCGGGC-HHHHHHTCE
T ss_pred EEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-C-CEEEEEEec--CCceEEEEcCEEEECCCCcc-hhHHHcCCC
Confidence 457888999999999999999999999999998864 4 567788764 45456899999999999988 566766654
No 34
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.46 E-value=2e-12 Score=142.66 Aligned_cols=74 Identities=28% Similarity=0.307 Sum_probs=59.8
Q ss_pred eechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhhcCCC
Q 006891 228 QMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQNV 307 (627)
Q Consensus 228 ~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~g~~~ 307 (627)
.++...+...|.+.+.+.|++|+++++|+++..++++ ++ |++.+ .+|+ .+++||.||.|+|.+| .+++.+|+..
T Consensus 144 ~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~--v~-v~~~~-~~G~-~~~~a~~vV~ADG~~S-~vR~~lGi~~ 217 (570)
T 3fmw_A 144 LVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEA--VE-VTVAG-PSGP-YPVRARYGVGCDGGRS-TVRRLAADRF 217 (570)
T ss_dssp CCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSC--EE-EEEEE-TTEE-EEEEESEEEECSCSSC-HHHHHTTCCC
T ss_pred EeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCe--EE-EEEEe-CCCc-EEEEeCEEEEcCCCCc-hHHHHcCCCC
Confidence 4677888999999999999999999999999987754 33 55543 2332 5899999999999999 8888888764
No 35
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.46 E-value=5.6e-12 Score=138.66 Aligned_cols=76 Identities=24% Similarity=0.278 Sum_probs=59.9
Q ss_pred ceechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEE--EEEEecCCCcEEEEEcCeEEeccCCChHHHhhhhc
Q 006891 227 GQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIG--ARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLAD 304 (627)
Q Consensus 227 g~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~g--V~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~g 304 (627)
..++...+...|.+.+.+.|++++++++|+++..++++ ++.+ |++.+ .++ ..+++||+||.|+|.+| .+++.+|
T Consensus 115 ~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~-~~~~v~v~~~~-~~~-~~~i~a~~vV~AdG~~S-~vR~~lg 190 (535)
T 3ihg_A 115 AMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDD-AGAGVTARLAG-PDG-EYDLRAGYLVGADGNRS-LVRESLG 190 (535)
T ss_dssp BCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGG-GCSEEEEEEEE-TTE-EEEEEEEEEEECCCTTC-HHHHHTT
T ss_pred cccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCC-ccccEEEEEEc-CCC-eEEEEeCEEEECCCCcc-hHHHHcC
Confidence 35677888999999999999999999999999987752 3223 44444 222 46899999999999999 8888887
Q ss_pred CC
Q 006891 305 QN 306 (627)
Q Consensus 305 ~~ 306 (627)
+.
T Consensus 191 i~ 192 (535)
T 3ihg_A 191 IG 192 (535)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 36
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.46 E-value=4.7e-13 Score=146.79 Aligned_cols=193 Identities=17% Similarity=0.132 Sum_probs=96.8
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCCCCcCCCCCcccchhhhhhhhhccCCcchHHHHHHHHHHHHH
Q 006891 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~g~S~~~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 148 (627)
+.++||||||||++|+++|+.|++ |++|+||||....+|+|..+.|.++...... .+... .+..
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~---------ds~~~---~~~d--- 69 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGSTFYAQGGIAAVFDET---------DSIDS---HVED--- 69 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC-------------CCSH---------HHHHH---HHHH---
T ss_pred CCCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCChhhcCCCEEEecCCC---------CCHHH---HHHH---
Confidence 446999999999999999999999 9999999999887777777766554221100 01111 0110
Q ss_pred HHHHCCCCcccCCCccccCCchhHHHHHHHHHHHHHhhcCCCCCCccccC----HHHH-HhhCCccccccccCCceEEEE
Q 006891 149 VIRNAPHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYS----AQES-AELFPTLAMKAKDRSLKGAVV 223 (627)
Q Consensus 149 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~l~----~~~~-~~~~p~l~~~~~~~~~~g~~~ 223 (627)
.+.....++.+ ..-..+...+....+++. ..|++ +.... .... ...++.. .....+.
T Consensus 70 ~l~~g~g~~d~---------~~v~~~~~~~~~~i~~l~-~~Gv~-f~~~~~~~~~g~~~~~~~gg~-------~~~r~~~ 131 (540)
T 1chu_A 70 TLIAGAGICDR---------HAVEFVASNARSCVQWLI-DQGVL-FDTHIQPNGEESYHLTREGGH-------SHRRILH 131 (540)
T ss_dssp HHHHTTTCCCH---------HHHHHHHHHHHHHHHHHH-HTTCC------------------------------------
T ss_pred HHHhhcccCCH---------HHHHHHHHhHHHHHHHHH-HcCCC-cccCcccCcCCcccccccccc-------ccCeEEE
Confidence 11111111110 000111112223344443 34554 22111 0000 0011100 0000011
Q ss_pred ecCceechHHHHHHHHHHHHH-cCCEEEcCcEEEEEEE-cCC-----CCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh
Q 006891 224 YYDGQMNDSRLNVGLALTAAL-AGAAVLNHAEVISLIK-DEA-----SNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (627)
Q Consensus 224 ~~~g~~~~~~l~~~l~~~a~~-~Gv~i~~~t~V~~l~~-~~~-----g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s 296 (627)
. +......++..|.+.+++ .|++|+++++|++|+. +++ + +|+||.+.+..+|+...+.||.||+|||+++
T Consensus 132 ~--~d~~g~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~-~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 132 A--ADATGREVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTR-RVVGAWVWNRNKETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp ------------CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSC-BEEEEEEEETTTTEEEEEECSEEEECCCCCG
T ss_pred e--CCCCHHHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCC-EEEEEEEEEcCCCcEEEEEcCeEEECCCCcc
Confidence 1 112345677788888888 7999999999999998 432 3 6899998764466666899999999999998
Q ss_pred HH
Q 006891 297 DS 298 (627)
Q Consensus 297 ~~ 298 (627)
..
T Consensus 209 ~~ 210 (540)
T 1chu_A 209 KV 210 (540)
T ss_dssp GG
T ss_pred cc
Confidence 54
No 37
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.42 E-value=1.2e-11 Score=134.54 Aligned_cols=74 Identities=22% Similarity=0.214 Sum_probs=59.5
Q ss_pred eechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhhcCCC
Q 006891 228 QMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQNV 307 (627)
Q Consensus 228 ~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~g~~~ 307 (627)
.++...+...|.+.+.+.|++|+++++|+++..++++ |+ |++.+ .+| ..+++||+||.|.|.+| .+++.+|+..
T Consensus 103 ~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~--v~-v~~~~-~~g-~~~~~a~~vVgADG~~S-~VR~~lg~~~ 176 (499)
T 2qa2_A 103 AVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDH--VV-VEVEG-PDG-PRSLTTRYVVGCDGGRS-TVRKAAGFDF 176 (499)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSC--EE-EEEEC-SSC-EEEEEEEEEEECCCTTC-HHHHHTTCCC
T ss_pred ecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE--EE-EEEEc-CCC-cEEEEeCEEEEccCccc-HHHHHcCCCC
Confidence 4566788889999999999999999999999998754 43 66655 334 35799999999999998 5888887653
No 38
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.41 E-value=1.1e-11 Score=134.72 Aligned_cols=74 Identities=28% Similarity=0.281 Sum_probs=59.1
Q ss_pred eechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhhcCCC
Q 006891 228 QMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQNV 307 (627)
Q Consensus 228 ~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~g~~~ 307 (627)
.++...+...|.+.+.+.|++|+++++|+++..+++ .|+ |++.+ .+| ..+++||+||.|.|.+| .+++.+|+..
T Consensus 102 ~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~--~v~-v~~~~-~~g-~~~~~a~~vVgADG~~S-~VR~~lg~~~ 175 (500)
T 2qa1_A 102 TVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGA--GVT-VEVRG-PEG-KHTLRAAYLVGCDGGRS-SVRKAAGFDF 175 (500)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETT--EEE-EEEEE-TTE-EEEEEESEEEECCCTTC-HHHHHTTCCC
T ss_pred ecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCC--eEE-EEEEc-CCC-CEEEEeCEEEECCCcch-HHHHHcCCCc
Confidence 355678888899999999999999999999998774 454 66665 333 35799999999999998 5888887653
No 39
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.39 E-value=1.7e-12 Score=143.96 Aligned_cols=193 Identities=12% Similarity=0.069 Sum_probs=108.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCC--CeEEEEcCCCCCCCCcCCCCCcccchhhhhhhhhccCCcchHHH-HHHHHHH
Q 006891 69 SNPLDILVIGGGATGCGVALDAATRG--LRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKL-VFHALEE 145 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~G--~~V~lvEk~~~~~g~S~~~~~~i~~g~~~~~~~~~~~~~~~~~~-~~~~l~~ 145 (627)
+.++||||||||++|+++|+.|+++| ++|+||||.....+.|...+|.+...+.. ...+.. ..+.+
T Consensus 3 ~~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~---------~ds~~~~~~d~~-- 71 (602)
T 1kf6_A 3 TFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQD---------HDSFEYHFHDTV-- 71 (602)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCST---------TCCHHHHHHHHH--
T ss_pred cccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCC---------CCCHHHHHHHHH--
Confidence 44689999999999999999999999 99999999875444443333322211100 011111 00111
Q ss_pred HHHHHHHCCCCcccCCCccccCCchhHHHHHHHHHHHHHhhcCCCCCCccccCHHHH-HhhCCccccccccCCceEEEEe
Q 006891 146 RKQVIRNAPHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQES-AELFPTLAMKAKDRSLKGAVVY 224 (627)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~l~~~~~-~~~~p~l~~~~~~~~~~g~~~~ 224 (627)
.....+..+ ..-..+...+....+++. ..|++. .......+ ...++.. .....++.
T Consensus 72 -----~~g~~~~d~---------~~v~~~~~~~~~~i~~L~-~~Gv~f-~~~~~g~~~~~~~gg~-------~~~r~~~~ 128 (602)
T 1kf6_A 72 -----AGGDWLCEQ---------DVVDYFVHHCPTEMTQLE-LWGCPW-SRRPDGSVNVRRFGGM-------KIERTWFA 128 (602)
T ss_dssp -----HHTTTCSCH---------HHHHHHHHHHHHHHHHHH-HTTCCC-CBCTTSSBCCBCCTTC-------SSCCEECS
T ss_pred -----HhcCCCCCH---------HHHHHHHHHHHHHHHHHH-HcCCCc-ccCCCCcccccccCCc-------cCCeEEEc
Confidence 111111100 000011111222333443 345441 11110000 0001000 00111111
Q ss_pred cCceechHHHHHHHHHHHHHcC-CEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHH
Q 006891 225 YDGQMNDSRLNVGLALTAALAG-AAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSV 299 (627)
Q Consensus 225 ~~g~~~~~~l~~~l~~~a~~~G-v~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l 299 (627)
.+ .....++..|.+.+.+.| ++|+++++|++|+.++ + +|+||.+.+..+|+...+.|+.||+|||+|+...
T Consensus 129 ~d--~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~-g-~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~ 200 (602)
T 1kf6_A 129 AD--KTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVDD-G-HVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVY 200 (602)
T ss_dssp TT--CHHHHHHHHHHHHHTTCTTEEEEETEEEEEEEEET-T-EEEEEEEEETTTTEEEEEECSCEEECCCCCGGGS
T ss_pred CC--CCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeC-C-EEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccc
Confidence 11 124678888999988888 9999999999999876 6 8999988764466656899999999999998653
No 40
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.39 E-value=5.6e-12 Score=139.65 Aligned_cols=69 Identities=17% Similarity=0.149 Sum_probs=56.5
Q ss_pred eechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEec---CCCcE-------EEEEcCeEEeccCCChH
Q 006891 228 QMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNN---LSGKE-------FDTYAKVVVNAAGPFCD 297 (627)
Q Consensus 228 ~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~---~~g~~-------~~i~A~~VV~AtG~~s~ 297 (627)
.++...+...|.+.+++.|++|+++++|+++..+++| +|+||++.+. .+|+. .+++||.||.|+|.++.
T Consensus 140 ~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g-~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 140 VVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDG-SVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTS-SEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCH
T ss_pred EEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCC-CEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCch
Confidence 4567789999999999999999999999999998767 8888887531 13421 47999999999999984
No 41
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.38 E-value=1.6e-12 Score=145.15 Aligned_cols=68 Identities=24% Similarity=0.181 Sum_probs=57.6
Q ss_pred chHHHHHHHHHHHHHc--CCEEEcCcEEEEEEEcCC--CCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHH
Q 006891 230 NDSRLNVGLALTAALA--GAAVLNHAEVISLIKDEA--SNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDS 298 (627)
Q Consensus 230 ~~~~l~~~l~~~a~~~--Gv~i~~~t~V~~l~~~~~--g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~ 298 (627)
+...+...|.+.+++. |++|++++.|++|+.+++ | +|.||.+.+..+|+...|.|+.||+|||+++..
T Consensus 164 ~G~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g-~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~~ 235 (662)
T 3gyx_A 164 NGESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPN-RIAGAVGFNLRANEVHIFKANAMVVACGGAVNV 235 (662)
T ss_dssp EETSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTT-BEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccc-eEEEEEEEEcCCCcEEEEEeCEEEECCCccccc
Confidence 4456778888888887 999999999999999875 6 899999877556777789999999999998853
No 42
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.38 E-value=3.5e-11 Score=128.20 Aligned_cols=59 Identities=14% Similarity=0.133 Sum_probs=50.4
Q ss_pred hHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChH
Q 006891 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 297 (627)
Q Consensus 231 ~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~ 297 (627)
...++..|.+.++++|++|+++++|++|..++ + +++||++ +| .++.||.||+|+|+|..
T Consensus 195 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-~-~~~gv~~----~g--~~~~ad~VV~a~~~~~~ 253 (425)
T 3ka7_A 195 CKGIIDALETVISANGGKIHTGQEVSKILIEN-G-KAAGIIA----DD--RIHDADLVISNLGHAAT 253 (425)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-T-EEEEEEE----TT--EEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHHcCCEEEECCceeEEEEEC-C-EEEEEEE----CC--EEEECCEEEECCCHHHH
Confidence 36788999999999999999999999999876 5 7888865 24 37999999999999864
No 43
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.37 E-value=5.2e-12 Score=135.63 Aligned_cols=70 Identities=13% Similarity=0.075 Sum_probs=58.0
Q ss_pred chHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh----------HHH
Q 006891 230 NDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC----------DSV 299 (627)
Q Consensus 230 ~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s----------~~l 299 (627)
....++..|.+.+++.|++|+++++|++|..++ + ++++|++. +|+ .++||.||+|+|.++ ..+
T Consensus 132 ~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~-~-~v~~V~~~---~G~--~i~Ad~VVlAtGg~s~~~~g~tG~g~~l 204 (447)
T 2i0z_A 132 KAQSVVDALLTRLKDLGVKIRTNTPVETIEYEN-G-QTKAVILQ---TGE--VLETNHVVIAVGGKSVPQTGSTGDGYAW 204 (447)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-T-EEEEEEET---TCC--EEECSCEEECCCCSSSGGGSCSSHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC-C-cEEEEEEC---CCC--EEECCEEEECCCCCcCCCCCCCcHHHHH
Confidence 357788899999999999999999999999865 5 78888773 353 699999999999999 567
Q ss_pred hhhhcCC
Q 006891 300 RKLADQN 306 (627)
Q Consensus 300 ~~~~g~~ 306 (627)
+..+|..
T Consensus 205 a~~~G~~ 211 (447)
T 2i0z_A 205 AEKAGHT 211 (447)
T ss_dssp HHHTTCC
T ss_pred HHHCCCC
Confidence 7777765
No 44
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.33 E-value=1.5e-11 Score=137.61 Aligned_cols=190 Identities=21% Similarity=0.190 Sum_probs=105.8
Q ss_pred CCCcEEEECCChHHHHHHHHHH---H-CCCeEEEEcCCCCCCCCcCCCCCcccchhhh--hhhhhccCCcchHHHHHHHH
Q 006891 70 NPLDILVIGGGATGCGVALDAA---T-RGLRVGLVEREDFSSGTSSRSTKLIHGGVRY--LEKAVFNLDYGQLKLVFHAL 143 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La---~-~G~~V~lvEk~~~~~g~S~~~~~~i~~g~~~--~~~~~~~~~~~~~~~~~~~l 143 (627)
.++||||||||++|+++|+.|+ + +|++|+||||..... ++..+.|....+..+ ...... ..+.....+..
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~~-s~~~a~G~~~~~~~~~~~~~~g~---~ds~~~~~~~~ 96 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVER-SGAVAQGLSAINTYIDLTGRSER---QNTLEDYVRYV 96 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTT-CSTTTTCEEEESCCCCSSSSBSC---CCCHHHHHHHH
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCCC-CcceecccccccchhhHHHhcCC---CCCHHHHHHHH
Confidence 4589999999999999999999 6 899999999997643 233333332211101 000000 01111111111
Q ss_pred HHHHHHHHHCCCCcccCCCccccCCchhHHHHHHHHHHHHHhhcCCCCCCccccCHHHHHhhCCccccccccCCceEEEE
Q 006891 144 EERKQVIRNAPHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAKDRSLKGAVV 223 (627)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~l~~~~~~~~~p~l~~~~~~~~~~g~~~ 223 (627)
. .....++.+ .....+........+++. ..|++.... ... ...+ ....
T Consensus 97 ~------~~g~~l~d~---------~~v~~~~~~~~~~i~~l~-~~Gv~f~~~-~~g---~~~~--------~~~~---- 144 (643)
T 1jnr_A 97 T------LDMMGLARE---------DLVADYARHVDGTVHLFE-KWGLPIWKT-PDG---KYVR--------EGQW---- 144 (643)
T ss_dssp H------HHTTTCCCH---------HHHHHHHHHHHHHHHHHH-HTTCCBCBC-TTS---CBCB--------SSSS----
T ss_pred H------HHhcCcCcH---------HHHHHHHHHHHHHHHHHH-HcCCcceeC-CCC---CccC--------CCcc----
Confidence 1 111111110 000111112223344443 346542111 000 0000 0000
Q ss_pred ecCceechHHHHHHHHHHHHHc-CC-EEEcCcEEEEEEEcCC--CCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHH
Q 006891 224 YYDGQMNDSRLNVGLALTAALA-GA-AVLNHAEVISLIKDEA--SNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDS 298 (627)
Q Consensus 224 ~~~g~~~~~~l~~~l~~~a~~~-Gv-~i~~~t~V~~l~~~~~--g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~ 298 (627)
...+++..+...+.+.+++. |+ +|+++++|++|+.+++ | +|+||.+.+..+|+...|.||.||+|||+++..
T Consensus 145 --~~~~~g~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g-~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~~ 220 (643)
T 1jnr_A 145 --QIMIHGESYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPN-AVAGAVGFSVREPKFYVFKAKAVILATGGATLL 220 (643)
T ss_dssp --CEEEEETTHHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTT-BEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred --ccCCCcHHHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccc-eeEEEEEEEecCCcEEEEEcCEEEECCCccccc
Confidence 00123445667777778887 99 9999999999998764 4 799998866456766689999999999999864
No 45
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.32 E-value=2.8e-11 Score=128.29 Aligned_cols=68 Identities=12% Similarity=0.124 Sum_probs=51.6
Q ss_pred eechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhh-cCC
Q 006891 228 QMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLA-DQN 306 (627)
Q Consensus 228 ~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~-g~~ 306 (627)
.++...+...|.+.+.+ ++|+++++|+++..+++ .+. |++ .+|+ ++.||.||.|+|.+| .+++.+ +..
T Consensus 123 ~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~--~v~-v~~---~~g~--~~~a~~vV~AdG~~S-~vr~~l~~~~ 191 (407)
T 3rp8_A 123 PVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDAD--GVT-VWF---TDGS--SASGDLLIAADGSHS-ALRPWVLGFT 191 (407)
T ss_dssp EEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETT--EEE-EEE---TTSC--EEEESEEEECCCTTC-SSHHHHHSSC
T ss_pred EEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCC--cEE-EEE---cCCC--EEeeCEEEECCCcCh-HHHHHhcCCC
Confidence 46677888888888776 89999999999998774 332 444 3454 799999999999998 555555 544
No 46
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.32 E-value=5.5e-11 Score=130.76 Aligned_cols=73 Identities=12% Similarity=0.084 Sum_probs=59.4
Q ss_pred CceechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhhcC
Q 006891 226 DGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQ 305 (627)
Q Consensus 226 ~g~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~g~ 305 (627)
...+++..+...|.+.+.+.|++++++ +|+++..+++| .+++|++. +|+ ++.||.||.|+|.++..+...++.
T Consensus 159 ~~~i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g-~~~~v~~~---~g~--~i~ad~vV~A~G~~s~~~~~~lg~ 231 (538)
T 2aqj_A 159 AWHFDAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRG-YISNLLTK---EGR--TLEADLFIDCSGMRGLLINQALKE 231 (538)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTS-CEEEEEET---TSC--EECCSEEEECCGGGCCCCCCCTCC
T ss_pred cEEEeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCC-cEEEEEEC---CCc--EEEeCEEEECCCCchhhHHHHhCC
Confidence 456899999999999999999999999 89999987666 67677663 353 689999999999999655555554
No 47
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.31 E-value=1.5e-11 Score=130.32 Aligned_cols=69 Identities=12% Similarity=0.033 Sum_probs=53.7
Q ss_pred echHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh----------HH
Q 006891 229 MNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC----------DS 298 (627)
Q Consensus 229 ~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s----------~~ 298 (627)
.....+...+.+.+++.|++++++++|++|..++++ +.|.+ .+| ++.||.||+|+|.++ ..
T Consensus 129 ~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~---~~V~~---~~g---~i~ad~VIlAtG~~S~p~~gs~g~g~~ 199 (417)
T 3v76_A 129 HSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASG---FRVTT---SAG---TVDAASLVVASGGKSIPKMGATGLAYR 199 (417)
T ss_dssp SCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE---EEEEE---TTE---EEEESEEEECCCCSSCGGGTCCCHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE---EEEEE---CCc---EEEeeEEEECCCCccCCCCCCCcHHHH
Confidence 346788889999999999999999999999987643 23433 222 799999999999998 45
Q ss_pred HhhhhcCC
Q 006891 299 VRKLADQN 306 (627)
Q Consensus 299 l~~~~g~~ 306 (627)
+++.+|..
T Consensus 200 la~~~G~~ 207 (417)
T 3v76_A 200 IAEQFGLP 207 (417)
T ss_dssp HHHHTTCC
T ss_pred HHHHCCCC
Confidence 66666654
No 48
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.27 E-value=4e-11 Score=130.74 Aligned_cols=58 Identities=17% Similarity=0.198 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh
Q 006891 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (627)
Q Consensus 232 ~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s 296 (627)
..++.+|++.++++|++|+++++|++|..++ + +++||++. +|+ ++.||.||.+++++.
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~-~-~~~gV~~~---~g~--~~~ad~VV~~a~~~~ 278 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTG-N-KIEAVHLE---DGR--RFLTQAVASNADVVH 278 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEET-T-EEEEEEET---TSC--EEECSCEEECCC---
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeC-C-eEEEEEec---CCc--EEEcCEEEECCCHHH
Confidence 5788999999999999999999999999987 5 89999884 454 789999999998874
No 49
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.27 E-value=7.9e-11 Score=127.08 Aligned_cols=177 Identities=12% Similarity=0.099 Sum_probs=103.0
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCCCCcCCCCCcccchhhhhhhhhccCCcchHHH-HHHHHHHHHHHHH
Q 006891 73 DILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKL-VFHALEERKQVIR 151 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~g~S~~~~~~i~~g~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~ 151 (627)
||||||||++|+++|+.|+++|++|+||||. ..+|+|..+.|.+....... ..... +.+.+..
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~---------d~~~~~~~d~l~~------ 64 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVGSD---------DSPELHAQDTIRV------ 64 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCSTT---------CCHHHHHHHHHHH------
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCCCC---------CCHHHHHHHHHHh------
Confidence 8999999999999999999999999999999 66667766665543221100 01111 1111110
Q ss_pred HCCCCcccCCCccccCCchhHHHHHHHHHHHHHhhcCCCCCCccccCHHHHHhhCCccccccccCCceEEEEecCceech
Q 006891 152 NAPHLSNALPCMTPCFDWFEVVYYWVGLKMYDLVAGRHLLHLSRYYSAQESAELFPTLAMKAKDRSLKGAVVYYDGQMND 231 (627)
Q Consensus 152 ~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~l~~~~~~~~~p~l~~~~~~~~~~g~~~~~~g~~~~ 231 (627)
...++.+ ..-..+........+++. ..|++. ..- ...++.. ...... + .+...+
T Consensus 65 -g~~~~d~---------~~v~~~~~~~~~~i~~l~-~~Gv~~-~~~-----~~~~~g~-------~~~r~~-~-~~d~~g 118 (472)
T 2e5v_A 65 -GDGLCDV---------KTVNYVTSEAKNVIETFE-SWGFEF-EED-----LRLEGGH-------TKRRVL-H-RTDETG 118 (472)
T ss_dssp -HTTCSCH---------HHHHHHHHHHHHHHHHHH-HTTCCC-CSS-----CBCCTTC-------SSCCEE-C-SSSCHH
T ss_pred -cCCcCCH---------HHHHHHHHHHHHHHHHHH-HcCCCC-Ccc-----cccccCc-------CcCcEE-E-eCCCCH
Confidence 0111110 000001111122233333 345542 110 0111111 001111 1 123456
Q ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHH
Q 006891 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDS 298 (627)
Q Consensus 232 ~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~ 298 (627)
..+...|.+.+++.|++++++++| +|..++ + +|.||++.+ ...++.||.||+|||+++..
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~-~-~v~Gv~v~~----~~g~~~a~~VVlAtGg~~~~ 178 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVKD-G-KVTGFVTEK----RGLVEDVDKLVLATGGYSYL 178 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEET-T-EEEEEEETT----TEEECCCSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEeC-C-EEEEEEEEe----CCCeEEeeeEEECCCCCccc
Confidence 788888998888889999999999 998876 5 899998742 22357899999999999854
No 50
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.24 E-value=6e-10 Score=122.72 Aligned_cols=72 Identities=17% Similarity=0.128 Sum_probs=59.1
Q ss_pred ceechHHHHHHHHHHHHHc-CCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhhcC
Q 006891 227 GQMNDSRLNVGLALTAALA-GAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQ 305 (627)
Q Consensus 227 g~~~~~~l~~~l~~~a~~~-Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~g~ 305 (627)
..+++..+...|.+.+++. |++++++ +|+++..+++| .+++|++. +|. ++.||.||+|+|.++..+.+.++.
T Consensus 189 ~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g-~~~~v~~~---~G~--~i~ad~vI~A~G~~S~~~~~~lg~ 261 (550)
T 2e4g_A 189 WHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANG-NIESVRTA---TGR--VFDADLFVDCSGFRGLLINKAMEE 261 (550)
T ss_dssp EEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTS-CEEEEEET---TSC--EEECSEEEECCGGGCCCCCCCTCC
T ss_pred eEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCC-CEEEEEEC---CCC--EEECCEEEECCCCchhhHHHHhCC
Confidence 4578899999999999998 9999999 99999987656 77777663 353 689999999999999665666654
No 51
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.23 E-value=1.7e-10 Score=115.99 Aligned_cols=84 Identities=13% Similarity=0.010 Sum_probs=58.0
Q ss_pred chHHHHHHHHHHHHH-cCCEEEcCcEEEEEEEcCCCCeEEEEEEEec---------CCCcEEEEEcCeEEeccCCC----
Q 006891 230 NDSRLNVGLALTAAL-AGAAVLNHAEVISLIKDEASNRIIGARIRNN---------LSGKEFDTYAKVVVNAAGPF---- 295 (627)
Q Consensus 230 ~~~~l~~~l~~~a~~-~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~---------~~g~~~~i~A~~VV~AtG~~---- 295 (627)
+...+...+.+.+.+ .|++++++++|+++..++ + ++.||.+.+. .+++...+.||.||+|+|..
T Consensus 117 ~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~-~-~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~ 194 (284)
T 1rp0_A 117 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-N-RVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFG 194 (284)
T ss_dssp CHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEET-T-EEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTT
T ss_pred CHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecC-C-eEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHH
Confidence 345677778887776 699999999999999876 5 8889987531 11334689999999999954
Q ss_pred --hHHHhhhhcCCCCCceecCcce
Q 006891 296 --CDSVRKLADQNVQPMICPSSGV 317 (627)
Q Consensus 296 --s~~l~~~~g~~~~~~i~p~kG~ 317 (627)
+..+....+.. +.+.|.+|.
T Consensus 195 ~~~~~~~~~~g~~--~~v~~~~g~ 216 (284)
T 1rp0_A 195 ATGVKRLKSIGMI--DHVPGMKAL 216 (284)
T ss_dssp THHHHHHHHTTSS--SCCCCCEEE
T ss_pred HHHHHHhhhccCC--CCcCCcCCc
Confidence 33443333322 346666664
No 52
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.22 E-value=1.2e-10 Score=126.92 Aligned_cols=65 Identities=18% Similarity=0.232 Sum_probs=54.7
Q ss_pred ceechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHH
Q 006891 227 GQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDS 298 (627)
Q Consensus 227 g~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~ 298 (627)
|......+...+.+.+++.|++|+++++|++|..++ + ++++|++. +|+ ++.||.||+|+|.++..
T Consensus 215 G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~-~-~v~gV~l~---~G~--~i~Ad~VVlA~G~~s~~ 279 (549)
T 3nlc_A 215 GTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMED-G-QITGVTLS---NGE--EIKSRHVVLAVGHSARD 279 (549)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESS-S-BEEEEEET---TSC--EEECSCEEECCCTTCHH
T ss_pred ccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeC-C-EEEEEEEC---CCC--EEECCEEEECCCCChhh
Confidence 444567888899999999999999999999999876 5 78888874 344 69999999999999974
No 53
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.21 E-value=7.2e-11 Score=124.54 Aligned_cols=68 Identities=16% Similarity=0.098 Sum_probs=52.9
Q ss_pred chHHHHHHHHHHHHHcCCEEEcCcEEEEEEEc----CCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh---------
Q 006891 230 NDSRLNVGLALTAALAGAAVLNHAEVISLIKD----EASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC--------- 296 (627)
Q Consensus 230 ~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~----~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s--------- 296 (627)
++..++..+.+.+++.|++++++++|+++..+ + + .+ .|.. .+ .+++||.||+|||.++
T Consensus 107 ~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~-~-~~-~v~~---~~---g~i~ad~VVlAtG~~s~p~~g~~G~ 177 (401)
T 2gqf_A 107 GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEK-V-RF-VLQV---NS---TQWQCKNLIVATGGLSMPGLGATPF 177 (401)
T ss_dssp CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSS-C-CE-EEEE---TT---EEEEESEEEECCCCSSCGGGTCCSH
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCC-C-eE-EEEE---CC---CEEECCEEEECCCCccCCCCCCChH
Confidence 66788889999999999999999999999976 4 3 32 3433 12 2799999999999998
Q ss_pred -HHHhhhhcCC
Q 006891 297 -DSVRKLADQN 306 (627)
Q Consensus 297 -~~l~~~~g~~ 306 (627)
..+++.+|..
T Consensus 178 g~~la~~~G~~ 188 (401)
T 2gqf_A 178 GYQIAEQFGIP 188 (401)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHCCCC
Confidence 3566666655
No 54
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.19 E-value=8.4e-10 Score=128.95 Aligned_cols=60 Identities=10% Similarity=0.030 Sum_probs=53.8
Q ss_pred CccccCCCccHHHHHHHHHhcCCCChhHHHHhhcccccCChHHHhhhHHHHHHHHHHHcCCCH
Q 006891 534 KRLAHGYPFLEAEVAYCARNEYCESAVDFVARRCRLAFLDTDAAGRALPRIIEIMATEHKWDK 596 (627)
Q Consensus 534 ~~~~~~~~~~~aei~~a~~~e~~~~~~D~l~RRtr~~~~~~~~~~~~~~~v~~~~~~~l~w~~ 596 (627)
..+|.|+.||++||+.|+++ ..+..+.||||||+||+.| ||.+|.+.+.+||++++|++.
T Consensus 482 ~~vc~c~~vt~~~i~~a~~~--g~~~~~~~k~~t~~g~g~c-qg~~c~~~~~~~~~~~~~~~~ 541 (965)
T 2gag_A 482 HFVDLQRDQTVADVLRATGA--GMKSVEHIKRYTSISTAND-QGKTSGVAAIGVIAAVLGIEN 541 (965)
T ss_dssp BEEETTTTEEHHHHHHHHHH--TCCSHHHHHHHHCTTCSTT-TTTTTHHHHHHHHHHHTTCSC
T ss_pred eEEecCCCCcHHHHHHHHHh--CCCCHHHHHHHhcCcccCc-CCcccHHHHHHHHHHHHCcCc
Confidence 58899999999999999986 4455556999999999988 799999999999999999987
No 55
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.17 E-value=1.5e-10 Score=129.70 Aligned_cols=77 Identities=14% Similarity=0.142 Sum_probs=59.5
Q ss_pred eechHHHHHHHHHHHHHcCC--EEEcCcEEEEEEEcCC--CCeEEEEEEEec---CCCcEEEEEcCeEEeccCCChHHHh
Q 006891 228 QMNDSRLNVGLALTAALAGA--AVLNHAEVISLIKDEA--SNRIIGARIRNN---LSGKEFDTYAKVVVNAAGPFCDSVR 300 (627)
Q Consensus 228 ~~~~~~l~~~l~~~a~~~Gv--~i~~~t~V~~l~~~~~--g~~v~gV~~~d~---~~g~~~~i~A~~VV~AtG~~s~~l~ 300 (627)
.++...+...|.+.+.+.|+ +|+++++|+++..+++ + ..+.|++++. .+|...+++||+||.|+|.+| .++
T Consensus 137 ~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~-~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S-~vR 214 (639)
T 2dkh_A 137 ILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAAD-YPVTVTLERCDAAHAGQIETVQARYVVGCDGARS-NVR 214 (639)
T ss_dssp ECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSS-CCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTC-HHH
T ss_pred eeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCc-CCEEEEEEeccccCCCCeEEEEeCEEEECCCcch-HHH
Confidence 45667888999999999987 9999999999998753 2 2234666531 245556899999999999999 588
Q ss_pred hhhcCC
Q 006891 301 KLADQN 306 (627)
Q Consensus 301 ~~~g~~ 306 (627)
+.+|..
T Consensus 215 ~~lg~~ 220 (639)
T 2dkh_A 215 RAIGRQ 220 (639)
T ss_dssp HHTTCC
T ss_pred HHhCCC
Confidence 888765
No 56
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.16 E-value=5.4e-10 Score=121.32 Aligned_cols=62 Identities=11% Similarity=-0.057 Sum_probs=52.5
Q ss_pred CccccCCCccHHHHHHHHHhcCCCChhHHHHhhcccccCChHHHhhhHHHHHHHHHHHcCCCHHHH
Q 006891 534 KRLAHGYPFLEAEVAYCARNEYCESAVDFVARRCRLAFLDTDAAGRALPRIIEIMATEHKWDKSRR 599 (627)
Q Consensus 534 ~~~~~~~~~~~aei~~a~~~e~~~~~~D~l~RRtr~~~~~~~~~~~~~~~v~~~~~~~l~w~~~~~ 599 (627)
..+|.| .++..+|..|+++ .+.++. -|+||||+||+.| ||.+|.+.+.++|++++|.+..++
T Consensus 412 ~~ic~~-~v~~~~i~~a~~~-g~~~~~-~~k~~t~~g~g~c-qg~~c~~~~~~~~~~~~~~~~~~~ 473 (493)
T 1y56_A 412 VQICGC-DVSLKKVDEVIRK-GITDLQ-IIKRLTHLAMGFC-QGRYCLFNGAVVVSQRTGKKLSEI 473 (493)
T ss_dssp SBCSSS-SCBHHHHHHHHHT-TCCCHH-HHHHHSCTTCSTT-TTTTTHHHHHHHHHHHHCCCGGGS
T ss_pred ceeECc-cCcHHHHHHHHHh-CCCCHH-HHHHHhcCCCccC-CCccCHHHHHHHHHHHHCcCHHHc
Confidence 467889 5999999999985 455555 5999999999988 799999999999999999877653
No 57
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.16 E-value=2.9e-10 Score=124.61 Aligned_cols=73 Identities=10% Similarity=0.137 Sum_probs=57.9
Q ss_pred ceechHHHHHHHHHHHHH-cCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhhcC
Q 006891 227 GQMNDSRLNVGLALTAAL-AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQ 305 (627)
Q Consensus 227 g~~~~~~l~~~l~~~a~~-~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~g~ 305 (627)
..+++..+...|.+.+.+ .|++++++ +|+++..+++| .+++|++. +|. +++||.||.|+|.++..+.+.++.
T Consensus 170 ~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g-~~~~v~~~---~g~--~i~ad~vV~AdG~~S~~~~~~lg~ 242 (526)
T 2pyx_A 170 YHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHG-DIEKLITK---QNG--EISGQLFIDCTGAKSLLLGEHLQV 242 (526)
T ss_dssp EEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTS-CEEEEEES---SSC--EEECSEEEECSGGGCCCCCCCTCC
T ss_pred EEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCC-cEEEEEEC---CCC--EEEcCEEEECCCcchHHHHHHhCC
Confidence 457888999999999999 89999999 59999987656 66666653 344 599999999999998654666664
Q ss_pred C
Q 006891 306 N 306 (627)
Q Consensus 306 ~ 306 (627)
.
T Consensus 243 ~ 243 (526)
T 2pyx_A 243 P 243 (526)
T ss_dssp C
T ss_pred C
Confidence 3
No 58
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.13 E-value=1.2e-10 Score=123.16 Aligned_cols=71 Identities=21% Similarity=0.144 Sum_probs=57.5
Q ss_pred eechHHHHHHHHHHHHHc-CCEEEcCcEEEEEEEcCCCCeEE-EEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhhcC
Q 006891 228 QMNDSRLNVGLALTAALA-GAAVLNHAEVISLIKDEASNRII-GARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQ 305 (627)
Q Consensus 228 ~~~~~~l~~~l~~~a~~~-Gv~i~~~t~V~~l~~~~~g~~v~-gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~g~ 305 (627)
.++...+...|.+.+.+. |++++++++|+++..++++ ++ .|++ .+|+ +++||.||.|+|.++. +++.++.
T Consensus 103 ~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~--v~g~v~~---~~g~--~~~ad~vV~AdG~~s~-vr~~lg~ 174 (399)
T 2x3n_A 103 LMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERH--AIDQVRL---NDGR--VLRPRVVVGADGIASY-VRRRLLD 174 (399)
T ss_dssp ECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTS--CEEEEEE---TTSC--EEEEEEEEECCCTTCH-HHHHTSC
T ss_pred cccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCc--eEEEEEE---CCCC--EEECCEEEECCCCChH-HHHHhCC
Confidence 467888999999999988 9999999999999987754 43 3544 3454 7899999999999995 7777776
Q ss_pred C
Q 006891 306 N 306 (627)
Q Consensus 306 ~ 306 (627)
.
T Consensus 175 ~ 175 (399)
T 2x3n_A 175 I 175 (399)
T ss_dssp C
T ss_pred C
Confidence 5
No 59
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=99.13 E-value=3.5e-10 Score=124.25 Aligned_cols=62 Identities=21% Similarity=0.288 Sum_probs=50.1
Q ss_pred HHcCCEEEcCcEEEEEEEcC---CCCeEEEEEEEecCCCcEEEEEcC-eEEeccCCC-hHHHhhhhcCC
Q 006891 243 ALAGAAVLNHAEVISLIKDE---ASNRIIGARIRNNLSGKEFDTYAK-VVVNAAGPF-CDSVRKLADQN 306 (627)
Q Consensus 243 ~~~Gv~i~~~t~V~~l~~~~---~g~~v~gV~~~d~~~g~~~~i~A~-~VV~AtG~~-s~~l~~~~g~~ 306 (627)
...|++|++++.|++|+.+. ++ +++||++.+ .+|+..+++|+ -||+|+|++ +.+|+...|+.
T Consensus 238 ~r~NL~V~t~a~V~rIl~d~~~~~~-ra~GV~~~~-~~G~~~~v~A~kEVILsAGa~~SPqLL~lSGIG 304 (583)
T 3qvp_A 238 QRPNLQVLTGQYVGKVLLSQNGTTP-RAVGVEFGT-HKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIG 304 (583)
T ss_dssp TCTTEEEECSCEEEEEEEECSSSSC-EEEEEEEES-STTCEEEEEEEEEEEECSCTTTHHHHHHHTTBS
T ss_pred cCCCcEEEcCCEEEEEEeccCCCCC-EEEEEEEEe-cCCcEEEEEECCEEEEeCCccCCHHHHHHcCCC
Confidence 35689999999999999873 35 999999874 35777889995 699999986 67777776654
No 60
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.12 E-value=1e-09 Score=116.99 Aligned_cols=58 Identities=16% Similarity=0.365 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCC
Q 006891 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPF 295 (627)
Q Consensus 232 ~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~ 295 (627)
..+..++.+.++++|++|+++++|++|..+++| +++||++. +|+ ++.||.||+++|.+
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g-~v~gV~~~---~G~--~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDN-KVCGIKSS---DGE--IAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTS-CEEEEEET---TSC--EEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCC-eEEEEEEC---CCc--EEECCEEEECCCcc
Confidence 688999999999999999999999999984446 89999873 354 68999999999988
No 61
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.09 E-value=2.1e-09 Score=112.65 Aligned_cols=67 Identities=21% Similarity=0.170 Sum_probs=53.8
Q ss_pred ceechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhhcC
Q 006891 227 GQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQ 305 (627)
Q Consensus 227 g~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~g~ 305 (627)
..++...+...|.+.+.+.|++++++++|+++.. + + .|++ .+|+ ++.||.||.|+|.++ .+++.++.
T Consensus 102 ~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~-~----~v~~---~~g~--~~~ad~vV~AdG~~s-~vr~~l~~ 168 (379)
T 3alj_A 102 RIMTRSHLHDALVNRARALGVDISVNSEAVAADP-V-G----RLTL---QTGE--VLEADLIVGADGVGS-KVRDSIGF 168 (379)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET-T-T----EEEE---TTSC--EEECSEEEECCCTTC-HHHHHHCC
T ss_pred EEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe-C-C----EEEE---CCCC--EEEcCEEEECCCccH-HHHHHhcC
Confidence 3567788899999999999999999999999977 3 3 2444 2454 689999999999998 57777765
No 62
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.08 E-value=3.5e-10 Score=120.41 Aligned_cols=56 Identities=13% Similarity=0.097 Sum_probs=46.5
Q ss_pred hHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh
Q 006891 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (627)
Q Consensus 231 ~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s 296 (627)
+..+...|.+.++++|++|+++++|++|..++ + ++ | . .+|+ ++.||.||+|+|++.
T Consensus 188 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-~-~v--V--~--~~g~--~~~ad~Vv~a~~~~~ 243 (421)
T 3nrn_A 188 CKAVIDELERIIMENKGKILTRKEVVEINIEE-K-KV--Y--T--RDNE--EYSFDVAISNVGVRE 243 (421)
T ss_dssp HHHHHHHHHHHHHTTTCEEESSCCEEEEETTT-T-EE--E--E--TTCC--EEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEEC-C-EE--E--E--eCCc--EEEeCEEEECCCHHH
Confidence 57889999999999999999999999999876 4 54 3 2 2343 789999999999875
No 63
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.07 E-value=1.8e-09 Score=109.75 Aligned_cols=67 Identities=15% Similarity=0.136 Sum_probs=51.2
Q ss_pred hHHHHHHHHHHHHH-cCCEEEcCcEEEEEEEcCC-----------------CCeEEEEEEEec---CCC------cEEEE
Q 006891 231 DSRLNVGLALTAAL-AGAAVLNHAEVISLIKDEA-----------------SNRIIGARIRNN---LSG------KEFDT 283 (627)
Q Consensus 231 ~~~l~~~l~~~a~~-~Gv~i~~~t~V~~l~~~~~-----------------g~~v~gV~~~d~---~~g------~~~~i 283 (627)
...+...|.+.+.+ .|+++++++.|++|+.+++ +.+|.||++... .++ +..+|
T Consensus 159 ~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i 238 (344)
T 3jsk_A 159 AALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTI 238 (344)
T ss_dssp HHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEE
Confidence 45677888888888 5999999999999988652 127889987531 122 34689
Q ss_pred EcCeEEeccCCChH
Q 006891 284 YAKVVVNAAGPFCD 297 (627)
Q Consensus 284 ~A~~VV~AtG~~s~ 297 (627)
+|++||+|||..+.
T Consensus 239 ~Ak~VV~ATG~~s~ 252 (344)
T 3jsk_A 239 NAPVIISTTGHDGP 252 (344)
T ss_dssp ECSEEEECCCSSSS
T ss_pred EcCEEEECCCCCch
Confidence 99999999999873
No 64
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.07 E-value=3.7e-10 Score=119.06 Aligned_cols=71 Identities=13% Similarity=0.128 Sum_probs=53.7
Q ss_pred chHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhhcC
Q 006891 230 NDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQ 305 (627)
Q Consensus 230 ~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~g~ 305 (627)
+...+...|.+.+.+.|++++++++|+++..++++ .+ .|++.+ +|+..+++||.||.|+|.+|. +++.++.
T Consensus 101 ~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~-~~-~v~~~~--~g~~~~~~a~~vV~AdG~~S~-vr~~l~~ 171 (394)
T 1k0i_A 101 GQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGE-RP-YVTFER--DGERLRLDCDYIAGCDGFHGI-SRQSIPA 171 (394)
T ss_dssp CHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSS-SC-EEEEEE--TTEEEEEECSEEEECCCTTCS-TGGGSCG
T ss_pred chHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCC-ce-EEEEec--CCcEEEEEeCEEEECCCCCcH-HHHhcCc
Confidence 45667788888888899999999999999886432 22 355532 454457999999999999984 7776654
No 65
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.06 E-value=1.7e-08 Score=108.67 Aligned_cols=38 Identities=29% Similarity=0.441 Sum_probs=34.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCC------CeEEEEcCCC-CCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRG------LRVGLVERED-FSS 107 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G------~~V~lvEk~~-~~~ 107 (627)
+.+||+|||||++|+++|++|+++| ++|+|+|+.+ +++
T Consensus 4 ~~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG 48 (470)
T 3i6d_A 4 GKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGG 48 (470)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCc
Confidence 3589999999999999999999999 9999999985 444
No 66
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.04 E-value=5.3e-10 Score=122.30 Aligned_cols=61 Identities=21% Similarity=0.351 Sum_probs=49.6
Q ss_pred eechHHHHHHHHHHHHH-cCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh
Q 006891 228 QMNDSRLNVGLALTAAL-AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (627)
Q Consensus 228 ~~~~~~l~~~l~~~a~~-~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s 296 (627)
+++...+...+.+.+++ .|+++ ++++|++|..++ + +|+||++. +|. .+.||.||+|||.|+
T Consensus 119 ~~Dr~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~-g-~V~GV~t~---dG~--~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 119 QADKKRYREYMKKVCENQENLYI-KQEEVVDIIVKN-N-QVVGVRTN---LGV--EYKTKAVVVTTGTFL 180 (637)
T ss_dssp EECHHHHHHHHHHHHHTCTTEEE-EESCEEEEEESS-S-BEEEEEET---TSC--EEECSEEEECCTTCB
T ss_pred hCCHHHHHHHHHHHHHhCCCCEE-EEeEEEEEEecC-C-EEEEEEEC---CCc--EEEeCEEEEccCCCc
Confidence 46777888888888887 59999 468999998876 5 88898873 453 799999999999874
No 67
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.04 E-value=1.1e-09 Score=123.10 Aligned_cols=77 Identities=14% Similarity=0.085 Sum_probs=58.0
Q ss_pred eechHHHHHHHHHHHHHcC---CEEEcCcEEEEEEEcC------CCCeEEEEEEEec-----------------------
Q 006891 228 QMNDSRLNVGLALTAALAG---AAVLNHAEVISLIKDE------ASNRIIGARIRNN----------------------- 275 (627)
Q Consensus 228 ~~~~~~l~~~l~~~a~~~G---v~i~~~t~V~~l~~~~------~g~~v~gV~~~d~----------------------- 275 (627)
.++...+...|.+.+.+.| +++.++++|+++..++ ++..| .|++.+.
T Consensus 115 ~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l 193 (665)
T 1pn0_A 115 VLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPV-TMTLRYMSEDESTPLQFGHKTENGLFRSNL 193 (665)
T ss_dssp ECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCCE-EEEEEECCGGGSCCCTTCCCCCSSSCCCHH
T ss_pred EeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCCE-EEEEEecccccccccccccccccccccccc
Confidence 3566788888888888887 8999999999999875 11123 3555541
Q ss_pred ----------------CCCcEEEEEcCeEEeccCCChHHHhhhhcCC
Q 006891 276 ----------------LSGKEFDTYAKVVVNAAGPFCDSVRKLADQN 306 (627)
Q Consensus 276 ----------------~~g~~~~i~A~~VV~AtG~~s~~l~~~~g~~ 306 (627)
.+|...+++||+||-|.|.+| .+++.+|+.
T Consensus 194 ~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S-~VR~~lg~~ 239 (665)
T 1pn0_A 194 QTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHS-WVRRTLGFE 239 (665)
T ss_dssp HHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTC-HHHHHHTCC
T ss_pred cccccccccccccccCCCCceEEEEeCEEEeccCCCC-HHHHhcCCC
Confidence 245456899999999999998 688888765
No 68
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.03 E-value=1e-09 Score=120.70 Aligned_cols=72 Identities=17% Similarity=0.125 Sum_probs=55.0
Q ss_pred echHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhhcCCC
Q 006891 229 MNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQNV 307 (627)
Q Consensus 229 ~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~g~~~ 307 (627)
++...+...|.+.+.+. |+++++|+++..++++ |+ |++.+..+|+..+++||+||.|+|.+| .+++.+|+..
T Consensus 135 i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~--v~-v~~~~~~~G~~~~i~a~~vVgADG~~S-~vR~~lg~~~ 206 (549)
T 2r0c_A 135 CPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDDH--VR-ATITDLRTGATRAVHARYLVACDGASS-PTRKALGIDA 206 (549)
T ss_dssp CCHHHHHHHHHHHHGGG---EECSEEEEEEEECSSC--EE-EEEEETTTCCEEEEEEEEEEECCCTTC-HHHHHHTCCC
T ss_pred cCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCCE--EE-EEEEECCCCCEEEEEeCEEEECCCCCc-HHHHHcCCCC
Confidence 45566777788877776 8999999999998754 44 566553346556899999999999999 4888887653
No 69
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.03 E-value=5.8e-10 Score=122.46 Aligned_cols=62 Identities=23% Similarity=0.287 Sum_probs=50.3
Q ss_pred ceechHHHHHHHHHHHHH-cCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh
Q 006891 227 GQMNDSRLNVGLALTAAL-AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (627)
Q Consensus 227 g~~~~~~l~~~l~~~a~~-~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s 296 (627)
.+++...+...+.+.+++ .|+++ ++++|++|..++ + +|+||++. +| ..+.||.||+|||.|+
T Consensus 119 ~~~Dr~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~-g-~V~GV~t~---dG--~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 119 AQADRVLYRQAVRTALENQPNLMI-FQQAVEDLIVEN-D-RVVGAVTQ---MG--LKFRAKAVVLTVGTFL 181 (651)
T ss_dssp EEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEESS-S-BEEEEEET---TS--EEEEEEEEEECCSTTT
T ss_pred hhCCHHHHHHHHHHHHHhCCCCEE-EEEEEEEEEecC-C-EEEEEEEC---CC--CEEECCEEEEcCCCCc
Confidence 356777888888888888 69999 568999998876 5 78888773 35 4799999999999985
No 70
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.02 E-value=5.4e-09 Score=110.72 Aligned_cols=74 Identities=20% Similarity=0.139 Sum_probs=54.5
Q ss_pred eechHHHHHHHHHHHHH-cC-CEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhhcC
Q 006891 228 QMNDSRLNVGLALTAAL-AG-AAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQ 305 (627)
Q Consensus 228 ~~~~~~l~~~l~~~a~~-~G-v~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~g~ 305 (627)
.++...+...|.+.+.+ .| ++++++++|+++.. +++ ++ |++.+..+|+..+++||.||.|+|.+| .+++.++.
T Consensus 103 ~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~--v~-v~~~~~~~g~~~~~~ad~vV~AdG~~S-~vR~~l~~ 177 (410)
T 3c96_A 103 SIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDG--RV-LIGARDGHGKPQALGADVLVGADGIHS-AVRAHLHP 177 (410)
T ss_dssp EEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETT--EE-EEEEEETTSCEEEEEESEEEECCCTTC-HHHHHHCT
T ss_pred eeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCc--cE-EEEecCCCCCceEEecCEEEECCCccc-hhHHHhcC
Confidence 45667888888888876 37 58999999999988 544 33 555442235445799999999999998 66776654
Q ss_pred C
Q 006891 306 N 306 (627)
Q Consensus 306 ~ 306 (627)
.
T Consensus 178 ~ 178 (410)
T 3c96_A 178 D 178 (410)
T ss_dssp T
T ss_pred C
Confidence 3
No 71
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.02 E-value=2.1e-08 Score=102.95 Aligned_cols=37 Identities=27% Similarity=0.393 Sum_probs=33.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSS 107 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~ 107 (627)
++||+|||||++|+++|+.|+++|++|+||||.+..+
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~g 38 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSG 38 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCc
Confidence 3799999999999999999999999999999986433
No 72
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.00 E-value=1.1e-08 Score=107.95 Aligned_cols=63 Identities=21% Similarity=0.162 Sum_probs=46.0
Q ss_pred hHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhhc
Q 006891 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLAD 304 (627)
Q Consensus 231 ~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~g 304 (627)
...+...|.+.+ .|++++++++|+++..++++ ++ |++ .+|+ ++.||.||.|+|.+| .+++.++
T Consensus 98 ~~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~--v~-v~~---~~g~--~~~ad~vV~AdG~~S-~vr~~~~ 160 (397)
T 2vou_A 98 YDSIYGGLYELF--GPERYHTSKCLVGLSQDSET--VQ-MRF---SDGT--KAEANWVIGADGGAS-VVRKRLL 160 (397)
T ss_dssp HHHHHHHHHHHH--CSTTEETTCCEEEEEECSSC--EE-EEE---TTSC--EEEESEEEECCCTTC-HHHHHHH
T ss_pred HHHHHHHHHHhC--CCcEEEcCCEEEEEEecCCE--EE-EEE---CCCC--EEECCEEEECCCcch-hHHHHhc
Confidence 345555555443 58999999999999987754 32 444 3454 689999999999998 6777666
No 73
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.00 E-value=7.9e-09 Score=104.47 Aligned_cols=40 Identities=25% Similarity=0.444 Sum_probs=35.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHC--CCeEEEEcCCCCCCC
Q 006891 69 SNPLDILVIGGGATGCGVALDAATR--GLRVGLVEREDFSSG 108 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~--G~~V~lvEk~~~~~g 108 (627)
..++||+|||||++|+++|+.|+++ |++|+|+|+++..+|
T Consensus 63 ~~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~gg 104 (326)
T 2gjc_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCT
T ss_pred cCcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccc
Confidence 4568999999999999999999998 999999999875443
No 74
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.98 E-value=5.2e-09 Score=101.64 Aligned_cols=62 Identities=18% Similarity=0.215 Sum_probs=48.1
Q ss_pred chHHHHHHHHHHHHHc-CCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHH
Q 006891 230 NDSRLNVGLALTAALA-GAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSV 299 (627)
Q Consensus 230 ~~~~l~~~l~~~a~~~-Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l 299 (627)
+...+...+.+.+++. |++++ +++|+++..++ + ++++|.+. +|. +++||.||+|+|.|+...
T Consensus 66 ~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~-~-~v~~v~~~---~g~--~i~a~~VV~A~G~~s~~~ 128 (232)
T 2cul_A 66 RVWAFHARAKYLLEGLRPLHLF-QATATGLLLEG-N-RVVGVRTW---EGP--PARGEKVVLAVGSFLGAR 128 (232)
T ss_dssp CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEET-T-EEEEEEET---TSC--CEECSEEEECCTTCSSCE
T ss_pred CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeC-C-EEEEEEEC---CCC--EEECCEEEECCCCChhhc
Confidence 3456677788888887 99998 57999998876 5 77777763 343 689999999999987543
No 75
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.97 E-value=1.2e-09 Score=119.81 Aligned_cols=62 Identities=19% Similarity=0.336 Sum_probs=49.4
Q ss_pred eechHHHHHHHHHHHHHc-CCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChH
Q 006891 228 QMNDSRLNVGLALTAALA-GAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 297 (627)
Q Consensus 228 ~~~~~~l~~~l~~~a~~~-Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~ 297 (627)
+++...+...+.+.+++. |++++ +.+|+.|..++ + +|.||.+. +|. .+.||.||+|||.|+.
T Consensus 113 ~~Dr~~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~-g-~V~GV~t~---~G~--~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 113 QADKTQYSLYMRRIVEHEPNIDLL-QDTVIGVSANS-G-KFSSVTVR---SGR--AIQAKAAILACGTFLN 175 (641)
T ss_dssp EECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEET-T-EEEEEEET---TSC--EEEEEEEEECCTTCBT
T ss_pred hcCHHHHHHHHHHHHHhCCCCEEE-eeEEEEEEecC-C-EEEEEEEC---CCc--EEEeCEEEECcCCCCC
Confidence 567778888888888874 99996 56999998866 5 88888773 454 7999999999998854
No 76
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.97 E-value=4.6e-10 Score=123.38 Aligned_cols=61 Identities=18% Similarity=0.293 Sum_probs=47.7
Q ss_pred HHcCCEEEcCcEEEEEEEcC-CCCeEEEEEEEecCCCcEEEEEc-CeEEeccCCC-hHHHhhhhcC
Q 006891 243 ALAGAAVLNHAEVISLIKDE-ASNRIIGARIRNNLSGKEFDTYA-KVVVNAAGPF-CDSVRKLADQ 305 (627)
Q Consensus 243 ~~~Gv~i~~~t~V~~l~~~~-~g~~v~gV~~~d~~~g~~~~i~A-~~VV~AtG~~-s~~l~~~~g~ 305 (627)
.+.|++|++++.|++|+.++ ++ +++||++.+ .+|...+++| |-||+|+|++ +.+|+...|+
T Consensus 217 ~r~Nl~v~~~a~v~ri~~~~~~~-~a~GV~~~~-~~g~~~~v~A~keVILsaGa~~sp~lL~~SGI 280 (577)
T 3q9t_A 217 NKPNITIVPEVHSKRLIINEADR-TCKGVTVVT-AAGNELNFFADREVILSQGVFETPKLLMLSGI 280 (577)
T ss_dssp SCTTEEEECSEEEEEEEEETTTT-EEEEEEEEE-TTSCEEEEEEEEEEEECSHHHHHHHHHHHTTE
T ss_pred cCCCeEEEcCcEEEEEEEeCCCC-EEEEEEEEe-CCCcEEEEEeeeEEEEcccccCChHHHHHcCC
Confidence 34689999999999999974 35 999999986 3467778999 6799999986 4556555443
No 77
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.95 E-value=3.8e-09 Score=115.94 Aligned_cols=68 Identities=19% Similarity=0.200 Sum_probs=52.4
Q ss_pred HHHHHHHH-HcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcC-eEEeccCCC-hHHHhhhhc
Q 006891 236 VGLALTAA-LAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAK-VVVNAAGPF-CDSVRKLAD 304 (627)
Q Consensus 236 ~~l~~~a~-~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~-~VV~AtG~~-s~~l~~~~g 304 (627)
..++..+. +.|++|++++.|++|+.++++ +++||++.+..+|+...++|+ .||+|+|++ +.+|+...|
T Consensus 212 ~a~l~~a~~~~~~~i~~~~~V~~i~~~~~~-~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL~~SG 282 (546)
T 2jbv_A 212 VSYIHPIVEQENFTLLTGLRARQLVFDADR-RCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLMLSG 282 (546)
T ss_dssp HHHTGGGTTCTTEEEECSCEEEEEEECTTS-BEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCCcEEEeCCEEEEEEECCCC-eEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhhhhcC
Confidence 34444444 469999999999999997646 899999875223666789997 999999994 777776554
No 78
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.92 E-value=4.3e-09 Score=108.81 Aligned_cols=59 Identities=17% Similarity=0.088 Sum_probs=45.2
Q ss_pred hHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChH
Q 006891 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 297 (627)
Q Consensus 231 ~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~ 297 (627)
...+...+.+.+++.|++++++++|+++..+++ .+.+|.+ .++ ++.+|.||+|+|.++.
T Consensus 75 ~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~--~~~~v~~---~~g---~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 75 RAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGE--RLRVVAR---DGR---QWLARAVISATGTWGE 133 (357)
T ss_dssp HHHHHHHHHHHHHHTTCCEECSCCEEEEEEETT--EEEEEET---TSC---EEEEEEEEECCCSGGG
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCC--cEEEEEe---CCC---EEEeCEEEECCCCCCC
Confidence 456677778888889999999999999998763 3322432 222 7999999999999874
No 79
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.92 E-value=1.6e-08 Score=108.54 Aligned_cols=61 Identities=15% Similarity=0.187 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEcC-CCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHH
Q 006891 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDE-ASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSV 299 (627)
Q Consensus 232 ~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~-~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l 299 (627)
..++.++++.+++.|++|+++++|++|..+. ++ ++++|++ +| .++.||.||+|+|+|++.+
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~-~~~~V~~----~g--~~~~ad~VV~a~~~~~~~l 303 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTG-KFEGVKT----KL--GTFKAPLVIADPTYFPEKC 303 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTTT-EEEEEEE----TT--EEEECSCEEECGGGCGGGE
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCC-eEEEEEE----CC--eEEECCEEEECCCccchhh
Confidence 5889999999999999999999999999872 36 8888765 24 3789999999999998765
No 80
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.89 E-value=4.6e-09 Score=114.02 Aligned_cols=66 Identities=18% Similarity=0.089 Sum_probs=48.6
Q ss_pred chHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcC-CCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh
Q 006891 230 NDSRLNVGLALTAALAGAAVLNHAEVISLIKDE-ASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (627)
Q Consensus 230 ~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~-~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s 296 (627)
+...+...|.+.+.+.|++++++++|+++..++ ++ ..++|++.+..+|+..++.||.||+|+|.++
T Consensus 164 ~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~-~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S 230 (497)
T 2bry_A 164 SIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKG-SGWRAQLQPNPPAQLASYEFDVLISAAGGKF 230 (497)
T ss_dssp EHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTT-CCBEEEEESCCCHHHHTCCBSEEEECCCTTC
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCC-CEEEEEEEECCCCCEEEEEcCEEEECCCCCc
Confidence 446777888888888999999999999998752 23 3455666431134223689999999999987
No 81
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.86 E-value=5.8e-08 Score=104.82 Aligned_cols=208 Identities=15% Similarity=0.158 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh-HHHhhhhcCC--CCC
Q 006891 233 RLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC-DSVRKLADQN--VQP 309 (627)
Q Consensus 233 ~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s-~~l~~~~g~~--~~~ 309 (627)
.+...+++.+.+ ++|+++++|++|..+++ .+ .|++ .+| ++.||.||+|++++. ..+....... ...
T Consensus 237 ~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~--~~-~v~~---~~g---~~~ad~vV~a~p~~~~~~ll~~~~~~~~~~~ 305 (475)
T 3lov_A 237 SLIERLEEVLER--SEIRLETPLLAISREDG--RY-RLKT---DHG---PEYADYVLLTIPHPQVVQLLPDAHLPELEQL 305 (475)
T ss_dssp HHHHHHHHHCSS--CEEESSCCCCEEEEETT--EE-EEEC---TTC---CEEESEEEECSCHHHHHHHCTTSCCHHHHTC
T ss_pred HHHHHHHhhccC--CEEEcCCeeeEEEEeCC--EE-EEEE---CCC---eEECCEEEECCCHHHHHHHcCccCHHHHhcC
Confidence 455555544332 79999999999998764 33 2332 233 689999999999886 3443211000 012
Q ss_pred ceecCcceEEEecCCCC-C-CCcceecccCCCCcEEEEE-e---cC----CcE-EEecCCCCCCCCCCCCCCHHHHHHHH
Q 006891 310 MICPSSGVHIVLPDYYS-P-EGMGLIVPKTKDGRVVFML-P---WL----GRT-VAGTTDSDTVITLLPEPHEDEIQFIL 378 (627)
Q Consensus 310 ~i~p~kG~~lv~~~~~~-~-~~~~~~~~~~~dg~~~~~~-P---~~----g~~-~iG~t~~~~~~~~~~~~~~~~~~~ll 378 (627)
...+....++.++.+.. + ...+++++...+-....+. + |. +.. +.+..............+++-++.++
T Consensus 306 ~~~~~~~v~l~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~ 385 (475)
T 3lov_A 306 TTHSTATVTMIFDQQQSLPIEGTGFVVNRRAPYSITACTAIDQKWNHSAPDHTVLRAFVGRPGNDHLVHESDEVLQQAVL 385 (475)
T ss_dssp CEEEEEEEEEEEECCSSCSSSSSEEEECTTSSCSEEEEEEHHHHCTTTCTTEEEEEEEECBTTBCGGGGSCHHHHHHHHH
T ss_pred CCCeEEEEEEEECCcCCCCCCCEEEEecCCCCCceEEEEEEcccCCCCCCCcEEEEEEeCCCCCCcccCCCHHHHHHHHH
Confidence 34455556677776541 1 1123454422221111111 0 11 122 21211111000011123455677888
Q ss_pred HHHhhhcccCCC-ccceeeeeeeeeccccCCCCCCCCCCcc-cceeeecCCCeEEEec-----ChhhhHHHHHHHHHHHH
Q 006891 379 DAISDYLNVKVR-RTDVLSAWSGIRPLAMDPSAKNTESISR-DHVVCEDFPGLVTITG-----GKWTTYRSMAEDAVNAA 451 (627)
Q Consensus 379 ~~~~~~~~~~l~-~~~i~~~~aG~Rp~~~d~~~~~~~~~~r-~~~i~~~~~gl~~~~G-----g~~t~~~~~Ae~~~~~~ 451 (627)
+.+.++++.... ....+..|..-.|...-+ ....+.. ...+....+|++. +| ..+.-+..-|+.+++.|
T Consensus 386 ~~L~~~~g~~~~p~~~~v~~w~~a~p~~~~g---~~~~~~~~~~~l~~~~~~l~~-aG~~~~g~g~~~a~~sG~~aA~~i 461 (475)
T 3lov_A 386 QDLEKICGRTLEPKQVIISRLMDGLPAYTVG---HADRIQRVREEVLAQYPGIYL-AGLAYDGVGLPDCVASAKTMIESI 461 (475)
T ss_dssp HHHHHHHSSCCCCSEEEEEEEEEEEECCCTT---HHHHHHHHHHHHHHHSTTEEE-CSTTTSCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCeEEEEEEcccCCCCCCCC---hHHHHHHHHHHHHhhCCCEEE-EccCCCCCCHHHHHHHHHHHHHHH
Confidence 889998832211 122456788766643211 0000000 0011112246443 33 23666777888888888
Q ss_pred HHcC
Q 006891 452 IKSG 455 (627)
Q Consensus 452 ~~~~ 455 (627)
.+.+
T Consensus 462 ~~~l 465 (475)
T 3lov_A 462 ELEQ 465 (475)
T ss_dssp HHTC
T ss_pred HHHh
Confidence 7764
No 82
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.85 E-value=2.3e-08 Score=109.10 Aligned_cols=60 Identities=12% Similarity=0.104 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhh
Q 006891 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLA 303 (627)
Q Consensus 232 ~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~ 303 (627)
..+..++++.+.+.|++++++++|++|..++ + ++ ++ .+|+ ++.||.||.+.-. +.+.+.+
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~-~-~v---~~---~~G~--~~~ad~vI~t~P~--~~l~~~l 281 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNANN-K-TV---TL---QDGT--TIGYKKLVSTMAV--DFLAEAM 281 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETTT-T-EE---EE---TTSC--EEEEEEEEECSCH--HHHHHHT
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEccC-C-EE---EE---cCCC--EEECCEEEECCCH--HHHHHhc
Confidence 5678888888888999999999999998865 3 43 34 3454 7899999988763 3444443
No 83
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.84 E-value=1.4e-08 Score=108.10 Aligned_cols=39 Identities=31% Similarity=0.492 Sum_probs=34.5
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC-CCCCCc
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED-FSSGTS 110 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~-~~~g~S 110 (627)
+||+|||||++|+++|+.|+++|++|+|||+++ +++.++
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 41 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAY 41 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCC
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeec
Confidence 799999999999999999999999999999976 444443
No 84
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.84 E-value=1.8e-08 Score=109.63 Aligned_cols=67 Identities=10% Similarity=0.126 Sum_probs=51.0
Q ss_pred HHHHHHHHcC-CEEEcCcEEEEEEEcCCCCeEEEEEEEecCCC---cEEEEEcCeEEeccCCC-hHHHhhhhc
Q 006891 237 GLALTAALAG-AAVLNHAEVISLIKDEASNRIIGARIRNNLSG---KEFDTYAKVVVNAAGPF-CDSVRKLAD 304 (627)
Q Consensus 237 ~l~~~a~~~G-v~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g---~~~~i~A~~VV~AtG~~-s~~l~~~~g 304 (627)
.++..+.+.| ++|++++.|++|+.+++|.+++||++.+ .+| +..+++|+.||+|+|++ +..|+...|
T Consensus 226 ~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~-~~g~~~~~~~v~A~~VIlaaG~~~s~~lL~~Sg 297 (504)
T 1n4w_A 226 TYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKD-TDGKLLATKEISCRYLFLGAGSLGSTELLVRAR 297 (504)
T ss_dssp THHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEEC-TTCCEEEEEEEEEEEEEECSHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeC-CCCccceeEEEeeCEEEEccCCCCCHHHHHhcc
Confidence 4455666675 9999999999999975322799999874 345 45689999999999998 666665554
No 85
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.83 E-value=5.4e-09 Score=114.60 Aligned_cols=62 Identities=21% Similarity=0.219 Sum_probs=48.4
Q ss_pred HHcCCEEEcCcEEEEEEEc---CC-CCeEEEEEEEecCCC-cEEEEEc-CeEEeccCCC-hHHHhhhhcCC
Q 006891 243 ALAGAAVLNHAEVISLIKD---EA-SNRIIGARIRNNLSG-KEFDTYA-KVVVNAAGPF-CDSVRKLADQN 306 (627)
Q Consensus 243 ~~~Gv~i~~~t~V~~l~~~---~~-g~~v~gV~~~d~~~g-~~~~i~A-~~VV~AtG~~-s~~l~~~~g~~ 306 (627)
...+++|++++.|++|+.+ ++ + +++||++.+ .+| +..+++| |-||+|+|++ +.+|+...|+.
T Consensus 219 ~r~NL~Vlt~a~V~rIl~~~~~~g~~-rA~GVe~~~-~~g~~~~~v~A~kEVILsAGai~SPqlL~lSGIG 287 (566)
T 3fim_B 219 SRPNLSVLINAQVTKLVNSGTTNGLP-AFRCVEYAE-QEGAPTTTVCAKKEVVLSAGSVGTPILLQLSGIG 287 (566)
T ss_dssp TCTTEEEESSCEEEEEECCEEETTEE-ECCEEEEES-STTSCCEEEEEEEEEEECCHHHHHHHHHHHTTEE
T ss_pred cCCCeEEECCCEEEEEEeecCCCCCC-EEEEEEEEE-CCCceEEEEEeeeEEEEecCCcCChHHHHhcCCC
Confidence 4568999999999999987 22 5 899999975 334 5678999 7899999976 67777766643
No 86
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.81 E-value=2.7e-08 Score=110.66 Aligned_cols=62 Identities=16% Similarity=0.213 Sum_probs=49.0
Q ss_pred cCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh-HHHhhhhcCC
Q 006891 245 AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC-DSVRKLADQN 306 (627)
Q Consensus 245 ~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s-~~l~~~~g~~ 306 (627)
.|++|++++.|++|..++++.+++||++.+..+|+..++.||.||+|+|... .+++...|+.
T Consensus 273 ~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~sgiG 335 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFG 335 (623)
T ss_dssp EEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHTTTSS
T ss_pred CCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHhcCCC
Confidence 4899999999999998753338999999875567777899999999999764 4455555543
No 87
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.80 E-value=5.1e-08 Score=107.19 Aligned_cols=69 Identities=16% Similarity=0.197 Sum_probs=51.3
Q ss_pred HHHHHHHHH-cCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcE--EEE-EcCeEEeccCCC-hHHHhhhhcCC
Q 006891 236 VGLALTAAL-AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKE--FDT-YAKVVVNAAGPF-CDSVRKLADQN 306 (627)
Q Consensus 236 ~~l~~~a~~-~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~--~~i-~A~~VV~AtG~~-s~~l~~~~g~~ 306 (627)
.++++.+.+ .|++|++++.|++|+.++ + +++||++.+..+|+. ..+ .+|.||+|+|+| +.+|+...|+.
T Consensus 199 ~~~l~~~~~~~~~~i~~~~~V~~i~~~~-~-~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~sGig 272 (546)
T 1kdg_A 199 ATYLQTALARPNFTFKTNVMVSNVVRNG-S-QILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIG 272 (546)
T ss_dssp HTHHHHHHTCTTEEEECSCCEEEEEEET-T-EEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHTTBS
T ss_pred HHHHHHHhhCCCcEEEeCCEEEEEEEeC-C-EEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHcCCC
Confidence 345666665 589999999999999976 6 899999865224542 233 779999999997 46777766654
No 88
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.80 E-value=3.1e-08 Score=100.26 Aligned_cols=37 Identities=22% Similarity=0.332 Sum_probs=33.3
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCC
Q 006891 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~ 105 (627)
|+.|||+|||||++|+++|+.|+++|++|+|||++.+
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~ 40 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTN 40 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 6679999999999999999999999999999999754
No 89
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.79 E-value=9.3e-08 Score=88.67 Aligned_cols=65 Identities=15% Similarity=-0.003 Sum_probs=48.5
Q ss_pred hHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhhcCC
Q 006891 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQN 306 (627)
Q Consensus 231 ~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~g~~ 306 (627)
+..+...+.+.+++.|++++++ +|+++..++++ +.|++ .+| ++.+|.||+|+|.++ ++.+.+|++
T Consensus 55 ~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~---~~v~~---~~g---~i~ad~vI~A~G~~~-~~~~~~g~~ 119 (180)
T 2ywl_A 55 GEELLRRLEAHARRYGAEVRPG-VVKGVRDMGGV---FEVET---EEG---VEKAERLLLCTHKDP-TLPSLLGLT 119 (180)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSS---EEEEC---SSC---EEEEEEEEECCTTCC-HHHHHHTCC
T ss_pred HHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCE---EEEEE---CCC---EEEECEEEECCCCCC-CccccCCCC
Confidence 3456677778888999999999 99999887643 22333 223 789999999999997 566666643
No 90
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.77 E-value=1.3e-08 Score=111.40 Aligned_cols=57 Identities=12% Similarity=0.174 Sum_probs=45.7
Q ss_pred HcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCC-hHHHhhhhc
Q 006891 244 LAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPF-CDSVRKLAD 304 (627)
Q Consensus 244 ~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~-s~~l~~~~g 304 (627)
..+.+++.++.|.++..++ + +++||.+.+ .+....+.|+.||+|+|+. +..|+...|
T Consensus 223 r~nl~v~~~~~v~~i~~~~-~-~a~gv~~~~--~~~~~~~~a~~VILsAGai~SP~LLl~SG 280 (526)
T 3t37_A 223 RKNLTILTGSRVRRLKLEG-N-QVRSLEVVG--RQGSAEVFADQIVLCAGALESPALLMRSG 280 (526)
T ss_dssp CTTEEEECSCEEEEEEEET-T-EEEEEEEEE--TTEEEEEEEEEEEECSHHHHHHHHHHHTT
T ss_pred CCCeEEEeCCEEEEEEecC-C-eEEEEEEEe--cCceEEEeecceEEcccccCCcchhhhcc
Confidence 3578999999999999987 5 899999876 3445788999999999975 566665544
No 91
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.76 E-value=3e-08 Score=104.53 Aligned_cols=65 Identities=18% Similarity=0.200 Sum_probs=46.6
Q ss_pred echHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhhc
Q 006891 229 MNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLAD 304 (627)
Q Consensus 229 ~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~g 304 (627)
++...+...|.+.+. +++++++++|+++..++++ +. |++ .+|+ +++||.||.|+|.++ .+++.++
T Consensus 125 i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~--v~-v~~---~~g~--~~~ad~vV~AdG~~S-~vR~~l~ 189 (398)
T 2xdo_A 125 INRNDLRAILLNSLE--NDTVIWDRKLVMLEPGKKK--WT-LTF---ENKP--SETADLVILANGGMS-KVRKFVT 189 (398)
T ss_dssp ECHHHHHHHHHHTSC--TTSEEESCCEEEEEECSSS--EE-EEE---TTSC--CEEESEEEECSCTTC-SCCTTTC
T ss_pred ECHHHHHHHHHhhcC--CCEEEECCEEEEEEECCCE--EE-EEE---CCCc--EEecCEEEECCCcch-hHHhhcc
Confidence 455667677766543 3688999999999987744 32 444 3454 689999999999998 5666554
No 92
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.76 E-value=1e-08 Score=112.32 Aligned_cols=66 Identities=21% Similarity=0.171 Sum_probs=49.8
Q ss_pred HHHHHHHcCCEEEcCcEEEEEEEcCC--CCeEEEEEEEecCCCcEEEE---EcCeEEeccCCC-hHHHhhhhcC
Q 006891 238 LALTAALAGAAVLNHAEVISLIKDEA--SNRIIGARIRNNLSGKEFDT---YAKVVVNAAGPF-CDSVRKLADQ 305 (627)
Q Consensus 238 l~~~a~~~Gv~i~~~t~V~~l~~~~~--g~~v~gV~~~d~~~g~~~~i---~A~~VV~AtG~~-s~~l~~~~g~ 305 (627)
+...+.+.|++|++++.|++|+.+++ + +++||++.+ .+|+...+ .+|.||+|+|++ +.+|+...|+
T Consensus 200 ~~~~~~~~~~~v~~~~~v~~i~~~~~~~~-~~~GV~~~~-~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~SGi 271 (536)
T 1ju2_A 200 LLNKGNSNNLRVGVHASVEKIIFSNAPGL-TATGVIYRD-SNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLSGV 271 (536)
T ss_dssp GGGGSCTTTEEEEESCEEEEEEECCSSSC-BEEEEEEEC-TTSCEEEEEEEEEEEEEECCHHHHHHHHHHHTTE
T ss_pred hhhhhcCCCcEEEeCCEEEEEEECCCCCC-EEEEEEEEe-CCCceEEEEeccCCEEEEcCcccCCHHHHHHcCC
Confidence 33445667999999999999998763 4 899999975 35655555 468999999997 6667665553
No 93
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.76 E-value=1.6e-07 Score=99.98 Aligned_cols=61 Identities=20% Similarity=0.269 Sum_probs=51.5
Q ss_pred hHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHH
Q 006891 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSV 299 (627)
Q Consensus 231 ~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l 299 (627)
...++.++.+.+++.|++|+++++|++|..++ + ++++|.. +| .++.||.||+|+|.|...+
T Consensus 233 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~-~-~v~~v~~----~g--~~~~ad~VV~a~~~~~~~~ 293 (433)
T 1d5t_A 233 LGELPQGFARLSAIYGGTYMLNKPVDDIIMEN-G-KVVGVKS----EG--EVARCKQLICDPSYVPDRV 293 (433)
T ss_dssp TTHHHHHHHHHHHHHTCCCBCSCCCCEEEEET-T-EEEEEEE----TT--EEEECSEEEECGGGCGGGE
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEEeC-C-EEEEEEE----CC--eEEECCEEEECCCCCcccc
Confidence 46889999999999999999999999999876 5 7877753 34 3789999999999998654
No 94
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.74 E-value=6.1e-08 Score=100.82 Aligned_cols=59 Identities=14% Similarity=0.133 Sum_probs=44.3
Q ss_pred echHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh
Q 006891 229 MNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (627)
Q Consensus 229 ~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s 296 (627)
+.+..+...+...+++.|++++++++|+++..++++ + .|.. .++ ++.+|.||+|+|.+.
T Consensus 85 ~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~--~-~v~~---~~g---~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 85 ISGETYAEYLQVVANHYELNIFENTVVTNISADDAY--Y-TIAT---TTE---TYHADYIFVATGDYN 143 (369)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS--E-EEEE---SSC---CEEEEEEEECCCSTT
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCe--E-EEEe---CCC---EEEeCEEEECCCCCC
Confidence 344566677777788899999999999999987644 2 2333 223 588999999999986
No 95
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.73 E-value=3.9e-08 Score=101.38 Aligned_cols=35 Identities=26% Similarity=0.334 Sum_probs=32.5
Q ss_pred CcEEEECCChHHHHHHHHHHH---CCCeEEEEcCCCCC
Q 006891 72 LDILVIGGGATGCGVALDAAT---RGLRVGLVEREDFS 106 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~---~G~~V~lvEk~~~~ 106 (627)
+||+|||||++|+++|+.|++ +|++|+|+||++..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~ 39 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDS 39 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCC
Confidence 599999999999999999999 99999999998643
No 96
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.72 E-value=7.8e-08 Score=105.44 Aligned_cols=61 Identities=23% Similarity=0.214 Sum_probs=46.3
Q ss_pred chHHHHHHHHHHHHHcCC--EEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh
Q 006891 230 NDSRLNVGLALTAALAGA--AVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (627)
Q Consensus 230 ~~~~l~~~l~~~a~~~Gv--~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s 296 (627)
+...+...+...+.+.|+ .++++++|+++..++++ ..+.|++ .+|+ ++.||.||+|+|.++
T Consensus 97 ~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~-~~w~V~~---~~G~--~i~ad~lV~AtG~~s 159 (549)
T 4ap3_A 97 TQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEG-LRWTVRT---DRGD--EVSARFLVVAAGPLS 159 (549)
T ss_dssp BHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTT-TEEEEEE---TTCC--EEEEEEEEECCCSEE
T ss_pred CHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCC-CEEEEEE---CCCC--EEEeCEEEECcCCCC
Confidence 345666677777888888 89999999999987654 4455555 3454 689999999999775
No 97
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.72 E-value=5.7e-08 Score=104.50 Aligned_cols=68 Identities=15% Similarity=0.107 Sum_probs=50.6
Q ss_pred echHHHHHHHHHHHHHcCCE--EEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChH
Q 006891 229 MNDSRLNVGLALTAALAGAA--VLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 297 (627)
Q Consensus 229 ~~~~~l~~~l~~~a~~~Gv~--i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~ 297 (627)
.....+...+...+++.|++ ++++++|+.+..++++ ..+.|++.+..+|+..++.+|.||+|||.++.
T Consensus 98 ~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~-~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~s~ 167 (464)
T 2xve_A 98 PPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDS-QTFTVTVQDHTTDTIYSEEFDYVVCCTGHFST 167 (464)
T ss_dssp CBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTT-TEEEEEEEETTTTEEEEEEESEEEECCCSSSS
T ss_pred CCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCC-CcEEEEEEEcCCCceEEEEcCEEEECCCCCCC
Confidence 34566777777888888998 9999999999887642 23456666533454467899999999998763
No 98
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.72 E-value=2e-07 Score=99.85 Aligned_cols=65 Identities=11% Similarity=0.033 Sum_probs=46.7
Q ss_pred chHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCc-EEEEEcCeEEeccCCChH
Q 006891 230 NDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGK-EFDTYAKVVVNAAGPFCD 297 (627)
Q Consensus 230 ~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~-~~~i~A~~VV~AtG~~s~ 297 (627)
....+...+...+.+.+..++++++|+++..++++ +.|++.+..+|+ ..++.+|.||+|+|.++.
T Consensus 113 ~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~---~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 113 HRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGS---WVVTYKGTKAGSPISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp BHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTE---EEEEEEESSTTCCEEEEEESEEEECCCSSSS
T ss_pred CHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCe---EEEEEeecCCCCeeEEEEeCEEEECCCCCCC
Confidence 34556666777777778889999999999887633 335665422344 347899999999999864
No 99
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=98.71 E-value=8.9e-08 Score=104.08 Aligned_cols=68 Identities=16% Similarity=0.058 Sum_probs=51.1
Q ss_pred HHHHHHHHHcC-CEEEcCcEEEEEEEcCCCCeEEEEEEEecCCC---cEEEEEcCeEEeccCCC-hHHHhhhhc
Q 006891 236 VGLALTAALAG-AAVLNHAEVISLIKDEASNRIIGARIRNNLSG---KEFDTYAKVVVNAAGPF-CDSVRKLAD 304 (627)
Q Consensus 236 ~~l~~~a~~~G-v~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g---~~~~i~A~~VV~AtG~~-s~~l~~~~g 304 (627)
..++..+.+.| ++|++++.|++|+.+++|.+++||++.+ .+| +..+++|+.||+|+|++ +..|+...|
T Consensus 230 ~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~-~~g~~~~~~~~~A~~VIlaaGa~~sp~lL~~Sg 302 (507)
T 1coy_A 230 KTYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQID-EQGNVVATKVVTADRVFFAAGSVGTSKLLVSMK 302 (507)
T ss_dssp TTHHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEEC-TTSCEEEEEEEEEEEEEECSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeC-CCCcccccEEEEeCEEEEccCccCCHHHHHhcc
Confidence 34455566665 9999999999999976332699999864 244 25689999999999998 666665554
No 100
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.70 E-value=4.4e-08 Score=107.15 Aligned_cols=62 Identities=19% Similarity=0.060 Sum_probs=47.3
Q ss_pred chHHHHHHHHHHHHHcCC--EEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChH
Q 006891 230 NDSRLNVGLALTAALAGA--AVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 297 (627)
Q Consensus 230 ~~~~l~~~l~~~a~~~Gv--~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~ 297 (627)
+...+...+...+.+.|+ .++++++|+++..++++ ..+.|++ .+|+ ++.+|.||+|+|.++.
T Consensus 85 ~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~-~~~~V~~---~~G~--~i~ad~lV~AtG~~s~ 148 (540)
T 3gwf_A 85 TQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDE-NLWEVTT---DHGE--VYRAKYVVNAVGLLSA 148 (540)
T ss_dssp EHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTT-TEEEEEE---TTSC--EEEEEEEEECCCSCCS
T ss_pred CHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCC-CEEEEEE---cCCC--EEEeCEEEECCccccc
Confidence 445666777778888898 89999999999987654 3444555 3454 6899999999998763
No 101
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.70 E-value=5.8e-08 Score=102.39 Aligned_cols=67 Identities=18% Similarity=0.094 Sum_probs=46.6
Q ss_pred echHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhhcCC
Q 006891 229 MNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQN 306 (627)
Q Consensus 229 ~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~g~~ 306 (627)
++-..+...|.+ ..+..|+++++|+++..++++ .|+ |++ .+|+ +++||.||-|.|.+| .+++.++..
T Consensus 109 i~R~~L~~~L~~---~~~~~v~~~~~v~~~~~~~~~-~v~-v~~---~dG~--~~~adlvVgADG~~S-~vR~~l~~~ 175 (412)
T 4hb9_A 109 ISRTELKEILNK---GLANTIQWNKTFVRYEHIENG-GIK-IFF---ADGS--HENVDVLVGADGSNS-KVRKQYLPF 175 (412)
T ss_dssp EEHHHHHHHHHT---TCTTTEECSCCEEEEEECTTS-CEE-EEE---TTSC--EEEESEEEECCCTTC-HHHHHHSTT
T ss_pred eeHHHHHHHHHh---hccceEEEEEEEEeeeEcCCC-eEE-EEE---CCCC--EEEeeEEEECCCCCc-chHHHhCCC
Confidence 333444444443 235678999999999987665 443 555 3464 789999999999998 677777654
No 102
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.70 E-value=5.3e-08 Score=99.79 Aligned_cols=36 Identities=19% Similarity=0.162 Sum_probs=33.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
...+||+|||||++|+++|+.|+++|++|+|||+.+
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~ 55 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMM 55 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 345899999999999999999999999999999975
No 103
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.69 E-value=1.3e-07 Score=103.84 Aligned_cols=38 Identities=24% Similarity=0.339 Sum_probs=34.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSS 107 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~ 107 (627)
.++||+|||||++|+++|+.|+++|++|+|||+++..+
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~G 52 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVG 52 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 45899999999999999999999999999999986433
No 104
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.68 E-value=3.6e-07 Score=99.77 Aligned_cols=73 Identities=14% Similarity=0.150 Sum_probs=54.4
Q ss_pred hHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHH--HhhhhcCC
Q 006891 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDS--VRKLADQN 306 (627)
Q Consensus 231 ~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~--l~~~~g~~ 306 (627)
+..+...+.+.+++.|++++++++|+++..++++ ++.++.+.. .+|+ .++.||.||+|+|.+.+. +++.+|+.
T Consensus 254 ~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~-~v~~~~v~~-~~G~-~~i~aD~Vv~A~G~~p~~~~~l~~~gl~ 328 (523)
T 1mo9_A 254 DNETRAYVLDRMKEQGMEIISGSNVTRIEEDANG-RVQAVVAMT-PNGE-MRIETDFVFLGLGEQPRSAELAKILGLD 328 (523)
T ss_dssp SHHHHHHHHHHHHHTTCEEESSCEEEEEEECTTS-BEEEEEEEE-TTEE-EEEECSCEEECCCCEECCHHHHHHHTCC
T ss_pred cHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCC-ceEEEEEEE-CCCc-EEEEcCEEEECcCCccCCccCHHHcCCc
Confidence 4567778888889999999999999999886555 665555543 2332 379999999999987654 55666644
No 105
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.66 E-value=5.7e-08 Score=98.82 Aligned_cols=57 Identities=12% Similarity=-0.053 Sum_probs=41.1
Q ss_pred hHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh
Q 006891 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (627)
Q Consensus 231 ~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s 296 (627)
+..+...+.+.+.+.|+++++ ++|+++..+++. + .|.+ .++. .+.+|.||+|+|.+.
T Consensus 69 ~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~--~-~v~~---~~g~--~~~~d~lvlAtG~~~ 125 (323)
T 3f8d_A 69 ASDMIKVFNKHIEKYEVPVLL-DIVEKIENRGDE--F-VVKT---KRKG--EFKADSVILGIGVKR 125 (323)
T ss_dssp HHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC--C--E-EEEE---SSSC--EEEEEEEEECCCCEE
T ss_pred HHHHHHHHHHHHHHcCCEEEE-EEEEEEEecCCE--E-EEEE---CCCC--EEEcCEEEECcCCCC
Confidence 345666777778888999998 999999887643 2 2333 2333 789999999999873
No 106
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=98.66 E-value=3.8e-08 Score=108.80 Aligned_cols=62 Identities=16% Similarity=0.215 Sum_probs=48.7
Q ss_pred HHHcCCEEEcCcEEEEEEEcCC---CCeEEEEEEEecCCCcEEEEEc-CeEEeccCCC-hHHHhhhhcC
Q 006891 242 AALAGAAVLNHAEVISLIKDEA---SNRIIGARIRNNLSGKEFDTYA-KVVVNAAGPF-CDSVRKLADQ 305 (627)
Q Consensus 242 a~~~Gv~i~~~t~V~~l~~~~~---g~~v~gV~~~d~~~g~~~~i~A-~~VV~AtG~~-s~~l~~~~g~ 305 (627)
+.+.|++|++++.|++|+.+++ + +++||++.+ .+|+...++| |.||+|+|++ +.+|+...|+
T Consensus 241 ~~~~nl~i~~~~~v~~l~~~~~~~~~-~~~GV~~~~-~~g~~~~v~A~k~VILaaG~~~sp~lL~~SGI 307 (587)
T 1gpe_A 241 YQRSNLEILTGQMVGKVLFKQTASGP-QAVGVNFGT-NKAVNFDVFAKHEVLLAAGSAISPLILEYSGI 307 (587)
T ss_dssp TTCTTEEEEESCEEEEEEEEEETTEE-EEEEEEEEE-ETTEEEEEEEEEEEEECSCTTTHHHHHHHTTE
T ss_pred hcCCCcEEEcCCEEEEEEECCCCCCC-EEEEEEEEe-CCCcEEEEEecccEEEccCCCCCHHHHHhCCC
Confidence 3456899999999999998642 4 899999975 4677778999 8999999985 5566655553
No 107
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.65 E-value=8.4e-08 Score=103.59 Aligned_cols=57 Identities=18% Similarity=0.101 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh
Q 006891 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (627)
Q Consensus 232 ~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s 296 (627)
..++..|.+.+.+.|++|+++++|++|..++++ ++.|.. ++. ++.||.||+|++++.
T Consensus 234 ~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~--~~~v~~----~~~--~~~ad~vv~a~p~~~ 290 (477)
T 3nks_A 234 EMLPQALETHLTSRGVSVLRGQPVCGLSLQAEG--RWKVSL----RDS--SLEADHVISAIPASV 290 (477)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEECGGG--CEEEEC----SSC--EEEESEEEECSCHHH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCc--eEEEEE----CCe--EEEcCEEEECCCHHH
Confidence 478889999999999999999999999987643 333432 232 689999999999875
No 108
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.65 E-value=3e-07 Score=95.30 Aligned_cols=60 Identities=20% Similarity=0.096 Sum_probs=44.4
Q ss_pred chHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh
Q 006891 230 NDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (627)
Q Consensus 230 ~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s 296 (627)
++..+...+.+.+.+.|++++++++|+.+..++++ . +.|.+ .+|. .+.+|.||+|+|..+
T Consensus 72 ~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~-~-~~v~~---~~g~--~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 72 PAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDG-T-FETRT---NTGN--VYRSRAVLIAAGLGA 131 (360)
T ss_dssp EHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTS-C-EEEEE---TTSC--EEEEEEEEECCTTCS
T ss_pred CHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCc-e-EEEEE---CCCc--EEEeeEEEEccCCCc
Confidence 34566677777888889999999999999987643 2 22443 2343 689999999999864
No 109
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.63 E-value=5.5e-08 Score=106.49 Aligned_cols=62 Identities=11% Similarity=0.104 Sum_probs=45.2
Q ss_pred chHHHHHHHHHHHHHcCC--EEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChH
Q 006891 230 NDSRLNVGLALTAALAGA--AVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 297 (627)
Q Consensus 230 ~~~~l~~~l~~~a~~~Gv--~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~ 297 (627)
....+...+...+.+.|+ .++++++|+++..++++ ..+.|++ .+|+ ++.+|.||+|+|.++.
T Consensus 85 ~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~-~~w~V~~---~~G~--~~~ad~lV~AtG~~s~ 148 (545)
T 3uox_A 85 SQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVEND-RLWEVTL---DNEE--VVTCRFLISATGPLSA 148 (545)
T ss_dssp BHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGG-TEEEEEE---TTTE--EEEEEEEEECCCSCBC
T ss_pred CHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCC-CEEEEEE---CCCC--EEEeCEEEECcCCCCC
Confidence 345556666677777887 78999999999886643 3444555 3453 7899999999998763
No 110
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.62 E-value=1.4e-07 Score=95.47 Aligned_cols=34 Identities=32% Similarity=0.495 Sum_probs=32.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC-eEEEEcCCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGL-RVGLVEREDF 105 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~~~ 105 (627)
|||+|||||++|+++|+.|+++|+ +|+|||++.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~ 36 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMP 36 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSST
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCC
Confidence 799999999999999999999999 9999999643
No 111
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.61 E-value=3.1e-07 Score=94.11 Aligned_cols=36 Identities=28% Similarity=0.492 Sum_probs=33.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
+..+||+|||||++|+++|+.|+++|++|+|||+++
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 38 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLP 38 (335)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 346899999999999999999999999999999975
No 112
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.60 E-value=3.3e-07 Score=98.50 Aligned_cols=61 Identities=20% Similarity=0.196 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCC-CCeEEEEEE--EecCCCcEEEEEcCeEEeccCC
Q 006891 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEA-SNRIIGARI--RNNLSGKEFDTYAKVVVNAAGP 294 (627)
Q Consensus 232 ~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~-g~~v~gV~~--~d~~~g~~~~i~A~~VV~AtG~ 294 (627)
..+...+...+.+.|++++++++|+++..+++ + +.+.+++ .+ .+|+..++.+|.||+|||.
T Consensus 127 ~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~-~~~~~~V~~~~-g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 127 MEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAG-QVEALRVISRN-ADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp HHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETT-EEEEEEEEEEE-TTSCEEEEEESEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCC-ceEEEEEEEec-CCCceEEEEeCEEEECCCC
Confidence 34555566666777899999999999987621 3 5554444 34 2344458999999999997
No 113
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.60 E-value=4.8e-08 Score=99.86 Aligned_cols=57 Identities=19% Similarity=0.126 Sum_probs=43.2
Q ss_pred hHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCC
Q 006891 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPF 295 (627)
Q Consensus 231 ~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~ 295 (627)
+..+...+.+.+.+.|++++++++|+++..++++ .+.|.+. ++ ++.+|.||+|+|.+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~--~~~v~~~---~g---~~~~d~vVlAtG~~ 122 (332)
T 3lzw_A 66 AQELINNLKEQMAKFDQTICLEQAVESVEKQADG--VFKLVTN---EE---THYSKTVIITAGNG 122 (332)
T ss_dssp HHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTS--CEEEEES---SE---EEEEEEEEECCTTS
T ss_pred HHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCC--cEEEEEC---CC---EEEeCEEEECCCCC
Confidence 4566777777788889999999999999987642 2334442 22 48999999999984
No 114
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.58 E-value=2.6e-07 Score=99.99 Aligned_cols=58 Identities=21% Similarity=0.185 Sum_probs=45.6
Q ss_pred hHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh
Q 006891 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (627)
Q Consensus 231 ~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s 296 (627)
+..+...+.+.+++.|++++++++|+++..+++ .+ .|++ .+|+ ++.+|.||+|+|...
T Consensus 231 ~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~--~v-~v~~---~~g~--~i~aD~Vi~A~G~~p 288 (484)
T 3o0h_A 231 DYDLRQLLNDAMVAKGISIIYEATVSQVQSTEN--CY-NVVL---TNGQ--TICADRVMLATGRVP 288 (484)
T ss_dssp CHHHHHHHHHHHHHHTCEEESSCCEEEEEECSS--SE-EEEE---TTSC--EEEESEEEECCCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCC--EE-EEEE---CCCc--EEEcCEEEEeeCCCc
Confidence 356777888888899999999999999988764 33 4555 3443 789999999999754
No 115
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.56 E-value=9.8e-07 Score=95.60 Aligned_cols=63 Identities=19% Similarity=0.106 Sum_probs=47.5
Q ss_pred hHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh
Q 006891 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (627)
Q Consensus 231 ~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s 296 (627)
+..+...+.+.+++.|++++.+++|+++..+++ .+ .|.+.+..+|+..++.+|.||+|+|...
T Consensus 238 d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~--~~-~v~~~~~~~g~~~~i~~D~Vi~a~G~~p 300 (491)
T 3urh_A 238 DGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGD--GA-KVTFEPVKGGEATTLDAEVVLIATGRKP 300 (491)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEEETT--EE-EEEEEETTSCCCEEEEESEEEECCCCEE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCeEEEEEEeCC--EE-EEEEEecCCCceEEEEcCEEEEeeCCcc
Confidence 355667777888889999999999999988763 33 3666652335446899999999999643
No 116
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.52 E-value=5.4e-07 Score=90.36 Aligned_cols=34 Identities=26% Similarity=0.489 Sum_probs=32.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.+||+|||||++|+++|+.|+++|++|+|||+++
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3899999999999999999999999999999965
No 117
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.52 E-value=6.8e-08 Score=95.23 Aligned_cols=37 Identities=27% Similarity=0.393 Sum_probs=34.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSS 107 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~ 107 (627)
++||+|||||++|+++|+.|+++|++|+||||.+..+
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~G 38 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSG 38 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC
Confidence 4899999999999999999999999999999986443
No 118
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.51 E-value=3.9e-07 Score=92.69 Aligned_cols=36 Identities=28% Similarity=0.587 Sum_probs=33.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~ 105 (627)
.++||+|||||++|+++|+.|+++|++|+|||+..+
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~ 50 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVA 50 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSST
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 358999999999999999999999999999999643
No 119
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.50 E-value=1e-07 Score=97.05 Aligned_cols=63 Identities=13% Similarity=0.043 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCC-CcEEEEEcCeEEeccCCCh
Q 006891 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLS-GKEFDTYAKVVVNAAGPFC 296 (627)
Q Consensus 232 ~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~-g~~~~i~A~~VV~AtG~~s 296 (627)
..+...+.+.+++.|++++++++|+++..++ + ++.+|++.+..+ |+..++.+|.||+|+|...
T Consensus 184 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~-~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p 247 (320)
T 1trb_A 184 KILIKRLMDKVENGNIILHTNRTLEEVTGDQ-M-GVTGVRLRDTQNSDNIESLDVAGLFVAIGHSP 247 (320)
T ss_dssp HHHHHHHHHHHHTSSEEEECSCEEEEEEECS-S-SEEEEEEECCTTCCCCEEEECSEEEECSCEEE
T ss_pred HHHHHHHHHhcccCCeEEEcCceeEEEEcCC-C-ceEEEEEEeccCCCceEEEEcCEEEEEeCCCC
Confidence 4455667777788999999999999998866 4 788888875223 5446899999999999654
No 120
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.49 E-value=3.3e-07 Score=93.48 Aligned_cols=35 Identities=26% Similarity=0.479 Sum_probs=32.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
..+||+|||||++|+++|+.|+++|++|+|||++.
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 41 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGM 41 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCC
Confidence 35899999999999999999999999999999974
No 121
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.47 E-value=2.9e-07 Score=94.23 Aligned_cols=56 Identities=13% Similarity=0.096 Sum_probs=41.4
Q ss_pred hHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh
Q 006891 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (627)
Q Consensus 231 ~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s 296 (627)
+..+...+.+.+.+.|++++.++ |+.+..++++ + .|.+ ++ ..+++|.||+|+|.+.
T Consensus 69 ~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~--~-~v~~----~~--~~~~~~~vv~A~G~~~ 124 (333)
T 1vdc_A 69 GVELTDKFRKQSERFGTTIFTET-VTKVDFSSKP--F-KLFT----DS--KAILADAVILAIGAVA 124 (333)
T ss_dssp HHHHHHHHHHHHHHTTCEEECCC-CCEEECSSSS--E-EEEC----SS--EEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcCCE--E-EEEE----CC--cEEEcCEEEECCCCCc
Confidence 45566777777888999999887 9998876543 2 1322 23 4789999999999875
No 122
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.45 E-value=3.5e-07 Score=103.73 Aligned_cols=39 Identities=26% Similarity=0.491 Sum_probs=34.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSG 108 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~g 108 (627)
..+||+|||||++|+++|+.|+++|++|+|+|+.+..+|
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 358999999999999999999999999999999864444
No 123
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.43 E-value=1.2e-06 Score=94.56 Aligned_cols=35 Identities=34% Similarity=0.647 Sum_probs=33.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.+|||+|||||++|+++|+.|+++|++|+|||+++
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 36 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYK 36 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 36999999999999999999999999999999986
No 124
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.42 E-value=1e-06 Score=89.14 Aligned_cols=59 Identities=17% Similarity=0.171 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCC-CCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh
Q 006891 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEA-SNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (627)
Q Consensus 232 ~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~-g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s 296 (627)
..+...+.+.+.+.|++++.+++|+.+..+.+ + ..+.|.+ .+|+ .+.+|.||+|+|.+.
T Consensus 56 ~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~-~~~~v~~---~~g~--~~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 56 QKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEG-GLHQIET---ASGA--VLKARSIIVATGAKW 115 (310)
T ss_dssp HHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTT-CCEEEEE---TTSC--EEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHcCCeEEccCEEEEEEecccCC-ceEEEEE---CCCC--EEEeCEEEECcCCCc
Confidence 34555666677788999999999999976532 1 1233444 2343 689999999999864
No 125
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.41 E-value=1.7e-05 Score=85.61 Aligned_cols=63 Identities=19% Similarity=0.226 Sum_probs=48.6
Q ss_pred hHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCC
Q 006891 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPF 295 (627)
Q Consensus 231 ~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~ 295 (627)
+..+...+.+.+++.|++++++++|+++..++++ .+ .|++.+..+++..++.+|.||+|+|.-
T Consensus 226 d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~-~~-~v~~~~~~~~~~~~~~~D~vi~a~G~~ 288 (483)
T 3dgh_A 226 DQQMAELVAASMEERGIPFLRKTVPLSVEKQDDG-KL-LVKYKNVETGEESEDVYDTVLWAIGRK 288 (483)
T ss_dssp CHHHHHHHHHHHHHTTCCEEETEEEEEEEECTTS-CE-EEEEEETTTCCEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCC-cE-EEEEecCCCCceeEEEcCEEEECcccc
Confidence 3556677778888999999999999999886655 44 467766334556689999999999953
No 126
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.40 E-value=1.2e-06 Score=94.92 Aligned_cols=62 Identities=21% Similarity=0.176 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCC-----CeEEEEEEEecCCCcEEEEEcCeEEeccCC
Q 006891 233 RLNVGLALTAALAGAAVLNHAEVISLIKDEAS-----NRIIGARIRNNLSGKEFDTYAKVVVNAAGP 294 (627)
Q Consensus 233 ~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g-----~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~ 294 (627)
++...+...|.+.+..++++++|+++..++.+ +..+-|++.+..+|+..++.|+.||+|+|.
T Consensus 146 E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 146 EFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 45555555666667779999999999875432 024667887767788788999999999994
No 127
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.40 E-value=1.3e-06 Score=88.39 Aligned_cols=36 Identities=33% Similarity=0.493 Sum_probs=33.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEE-EcCCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGL-VEREDF 105 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~l-vEk~~~ 105 (627)
..+||+|||||++|+++|+.|+++|++|+| +||..+
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~~ 39 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMP 39 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSST
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCCC
Confidence 458999999999999999999999999999 999543
No 128
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.40 E-value=4.4e-06 Score=89.82 Aligned_cols=58 Identities=14% Similarity=0.130 Sum_probs=45.1
Q ss_pred hHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChH
Q 006891 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 297 (627)
Q Consensus 231 ~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~ 297 (627)
+..+...+.+.+++.|++++++++|+++..++ + ...|.+ ++ .++.+|.||+|+|.+.+
T Consensus 215 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~--~~~v~~----~~--~~i~aD~Vv~a~G~~p~ 272 (467)
T 1zk7_A 215 DPAIGEAVTAAFRAEGIEVLEHTQASQVAHMD-G--EFVLTT----TH--GELRADKLLVATGRTPN 272 (467)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTCCEEEEEEET-T--EEEEEE----TT--EEEEESEEEECSCEEES
T ss_pred CHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC-C--EEEEEE----CC--cEEEcCEEEECCCCCcC
Confidence 45677788888899999999999999998765 3 333443 23 37899999999998764
No 129
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.36 E-value=2.5e-06 Score=87.34 Aligned_cols=36 Identities=33% Similarity=0.383 Sum_probs=33.1
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
+..+||+|||||++|+++|+.|++.|++|+|||+..
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 47 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS 47 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 456899999999999999999999999999999764
No 130
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.35 E-value=3.3e-06 Score=89.29 Aligned_cols=69 Identities=16% Similarity=0.141 Sum_probs=54.8
Q ss_pred hHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChH-HHhhhhcCC
Q 006891 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD-SVRKLADQN 306 (627)
Q Consensus 231 ~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~-~l~~~~g~~ 306 (627)
+..+...+.+.++++|++++++++|+++..++ + ++.+|++. +|+ ++.||.||+|+|...+ .+++..|+.
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~-~v~~v~l~---dG~--~i~aD~Vv~a~G~~p~~~l~~~~gl~ 262 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEGDG-T-KVTGVRMQ---DGS--VIPADIVIVGIGIVPCVGALISAGAS 262 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEESS-S-BEEEEEES---SSC--EEECSEEEECSCCEESCHHHHHTTCC
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEecC-C-cEEEEEeC---CCC--EEEcCEEEECCCCccChHHHHhCCCC
Confidence 46677788888899999999999999998865 5 78888874 354 7899999999998764 366665554
No 131
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.34 E-value=6.3e-06 Score=89.80 Aligned_cols=36 Identities=33% Similarity=0.531 Sum_probs=33.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
+.+|||+|||||++|+++|+.|++.|++|+|||+++
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 346999999999999999999999999999999975
No 132
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.31 E-value=5.5e-06 Score=90.26 Aligned_cols=34 Identities=32% Similarity=0.743 Sum_probs=32.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEcC
Q 006891 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVER 102 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk 102 (627)
+..+||+|||||++|+++|+.|+++|++|+|||+
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~ 243 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE 243 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC
Confidence 5679999999999999999999999999999986
No 133
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.29 E-value=2.4e-06 Score=91.79 Aligned_cols=35 Identities=34% Similarity=0.570 Sum_probs=32.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~ 105 (627)
++||+|||||++|+++|+.|+++|++|+|||++.+
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~ 37 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKYW 37 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 48999999999999999999999999999999743
No 134
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.28 E-value=1.3e-05 Score=86.70 Aligned_cols=36 Identities=36% Similarity=0.629 Sum_probs=33.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
+.+|||+|||||.+|+++|+.|++.|++|+||||.+
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~ 39 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVE 39 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecc
Confidence 456999999999999999999999999999999854
No 135
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.28 E-value=5e-07 Score=91.61 Aligned_cols=38 Identities=29% Similarity=0.411 Sum_probs=34.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCC
Q 006891 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFS 106 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~ 106 (627)
+.+|||+|||||++|+++|+.|+++|++|+|||++.++
T Consensus 4 e~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~g 41 (312)
T 4gcm_A 4 EIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPG 41 (312)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCC
Confidence 45799999999999999999999999999999997643
No 136
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.27 E-value=7.9e-06 Score=88.11 Aligned_cols=36 Identities=42% Similarity=0.578 Sum_probs=33.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~ 105 (627)
.++||+|||||++|+++|+.|+++|++|+|||++.+
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~~ 45 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKAL 45 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSCT
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCCc
Confidence 469999999999999999999999999999999754
No 137
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.27 E-value=3.6e-07 Score=103.26 Aligned_cols=40 Identities=30% Similarity=0.410 Sum_probs=35.3
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 006891 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSG 108 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~g 108 (627)
...+||+|||||++|+++|+.|+++|++|+|||+++..+|
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG 428 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGG 428 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 3468999999999999999999999999999999864333
No 138
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.24 E-value=1.2e-06 Score=94.44 Aligned_cols=34 Identities=35% Similarity=0.640 Sum_probs=32.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
++||+|||||++|+++|+.|+++|++|+|||+++
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~ 38 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRG 38 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 5899999999999999999999999999999964
No 139
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.21 E-value=3.7e-06 Score=90.78 Aligned_cols=34 Identities=44% Similarity=0.781 Sum_probs=32.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
++||+|||||++|+++|+.|++.|++|+|||+++
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~ 39 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYK 39 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 5899999999999999999999999999999965
No 140
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.16 E-value=1.3e-06 Score=89.24 Aligned_cols=40 Identities=25% Similarity=0.434 Sum_probs=34.8
Q ss_pred CCCCcEEEECCChHHHHHHHHHHH--CCCeEEEEcCCCCCCC
Q 006891 69 SNPLDILVIGGGATGCGVALDAAT--RGLRVGLVEREDFSSG 108 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~--~G~~V~lvEk~~~~~g 108 (627)
..++||+|||||++|+++|++|++ .|++|+||||++..+|
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG 104 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCT
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCc
Confidence 567999999999999999999986 4999999999864443
No 141
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.13 E-value=1e-05 Score=87.64 Aligned_cols=35 Identities=31% Similarity=0.530 Sum_probs=33.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHC---CCeEEEEcCCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATR---GLRVGLVEREDF 105 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~---G~~V~lvEk~~~ 105 (627)
++||+|||||++|+++|+.|+++ |++|+|||++++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~~ 39 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDGI 39 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSCT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCCc
Confidence 48999999999999999999999 999999999873
No 142
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.11 E-value=1.6e-06 Score=87.71 Aligned_cols=36 Identities=19% Similarity=0.221 Sum_probs=33.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFS 106 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~ 106 (627)
.|||+|||||++|+++|+.|+++|++|+|||++..+
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~g 39 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAG 39 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGG
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCC
Confidence 599999999999999999999999999999998653
No 143
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.10 E-value=8e-06 Score=87.92 Aligned_cols=35 Identities=20% Similarity=0.188 Sum_probs=31.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHC--CCeEEEEcCCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATR--GLRVGLVEREDF 105 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~--G~~V~lvEk~~~ 105 (627)
..||+|||||++|+++|+.|+++ |.+|+|||+++.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~ 39 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASR 39 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC--
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCc
Confidence 36999999999999999999998 999999999863
No 144
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.09 E-value=4.5e-06 Score=89.35 Aligned_cols=33 Identities=18% Similarity=0.255 Sum_probs=31.4
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATR--GLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~--G~~V~lvEk~~ 104 (627)
+||+|||||++|+++|+.|+++ |.+|+|||+++
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~ 35 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMND 35 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 5899999999999999999998 99999999986
No 145
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.09 E-value=3.8e-05 Score=83.61 Aligned_cols=36 Identities=39% Similarity=0.493 Sum_probs=33.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~ 105 (627)
.+|||+|||||.+|..+|..+++.|+||+|||+...
T Consensus 41 ydYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~ 76 (542)
T 4b1b_A 41 YDYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKP 76 (542)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEecccc
Confidence 469999999999999999999999999999998753
No 146
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.06 E-value=3.6e-06 Score=91.12 Aligned_cols=35 Identities=14% Similarity=0.174 Sum_probs=32.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCC---CeEEEEcCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRG---LRVGLVERED 104 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G---~~V~lvEk~~ 104 (627)
.++||+|||||.+|+++|..|++.| .+|+|||+++
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~ 71 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNS 71 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCC
Confidence 4589999999999999999999988 9999999976
No 147
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.05 E-value=1.5e-05 Score=88.28 Aligned_cols=37 Identities=30% Similarity=0.385 Sum_probs=33.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHC--CCeEEEEcCCCC
Q 006891 69 SNPLDILVIGGGATGCGVALDAATR--GLRVGLVEREDF 105 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~--G~~V~lvEk~~~ 105 (627)
+...||||||||++|+++|+.|+++ |.+|+|||+++.
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~ 72 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEY 72 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSC
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCC
Confidence 4457999999999999999999998 899999999863
No 148
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.03 E-value=6e-06 Score=88.23 Aligned_cols=34 Identities=18% Similarity=0.384 Sum_probs=31.5
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCeEEEEcCCCC
Q 006891 72 LDILVIGGGATGCGVALDAATR--GLRVGLVEREDF 105 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~--G~~V~lvEk~~~ 105 (627)
.||||||||.+|+++|..|++. |.+|+|||+++.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~ 36 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDF 36 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCc
Confidence 3899999999999999999998 999999999863
No 149
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.02 E-value=1.1e-05 Score=86.34 Aligned_cols=33 Identities=21% Similarity=0.536 Sum_probs=31.6
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATR--GLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~--G~~V~lvEk~~ 104 (627)
.||+|||||++|+++|+.|+++ |.+|+|||+++
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~ 37 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQA 37 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 5999999999999999999998 99999999987
No 150
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.00 E-value=3.2e-06 Score=89.27 Aligned_cols=33 Identities=18% Similarity=0.282 Sum_probs=31.3
Q ss_pred CcEEEECCChHHHHHHHHHHH---CCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAAT---RGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~---~G~~V~lvEk~~ 104 (627)
.||||||||++|+++|+.|++ .|.+|+|||+++
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCC
Confidence 389999999999999999999 899999999986
No 151
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.00 E-value=1.4e-05 Score=85.34 Aligned_cols=34 Identities=26% Similarity=0.417 Sum_probs=31.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHC--CCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATR--GLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~--G~~V~lvEk~~ 104 (627)
.+||+|||||++|+++|+.|+++ |.+|+|||+++
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~ 38 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATE 38 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSS
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCC
Confidence 47999999999999999999998 88999999986
No 152
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.98 E-value=4.7e-06 Score=87.60 Aligned_cols=40 Identities=33% Similarity=0.482 Sum_probs=35.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHC-CCeEEEEcCCCCCCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATR-GLRVGLVEREDFSSGT 109 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~-G~~V~lvEk~~~~~g~ 109 (627)
.++||+|||||++|+++|+.|+++ |++|+|+|+++..+|.
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~ 46 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGN 46 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCe
Confidence 369999999999999999999999 9999999999744443
No 153
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.97 E-value=1.2e-05 Score=86.81 Aligned_cols=34 Identities=24% Similarity=0.496 Sum_probs=31.7
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCeEEEEcCCCC
Q 006891 72 LDILVIGGGATGCGVALDAATR--GLRVGLVEREDF 105 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~--G~~V~lvEk~~~ 105 (627)
+||+|||||++|+++|+.|++. |.+|+|||+++.
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~ 72 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEI 72 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSC
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 6999999999999999999996 999999999864
No 154
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.94 E-value=7.1e-06 Score=85.62 Aligned_cols=41 Identities=34% Similarity=0.523 Sum_probs=36.1
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 006891 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGT 109 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~g~ 109 (627)
...+||+|||||++|+++|+.|+++|.+|+|+|+++..+|.
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~ 67 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGN 67 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGG
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCc
Confidence 45699999999999999999999999999999998644443
No 155
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.94 E-value=8.9e-06 Score=86.14 Aligned_cols=39 Identities=26% Similarity=0.410 Sum_probs=34.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCC-CeEEEEcCCCCCC
Q 006891 69 SNPLDILVIGGGATGCGVALDAATRG-LRVGLVEREDFSS 107 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~G-~~V~lvEk~~~~~ 107 (627)
..++||+|||||++|+++|+.|+++| ++|+|+|+++..+
T Consensus 4 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~G 43 (424)
T 2b9w_A 4 SKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVG 43 (424)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCC
Confidence 34689999999999999999999999 9999999986433
No 156
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.93 E-value=9.2e-06 Score=87.79 Aligned_cols=40 Identities=25% Similarity=0.510 Sum_probs=35.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGT 109 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~g~ 109 (627)
..+||+|||||++|+++|+.|+++|++|+|+|+++..+|.
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~ 49 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGR 49 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCc
Confidence 4589999999999999999999999999999999755553
No 157
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.93 E-value=4.8e-06 Score=90.73 Aligned_cols=40 Identities=23% Similarity=0.351 Sum_probs=35.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCC-CeEEEEcCCCCCCC
Q 006891 69 SNPLDILVIGGGATGCGVALDAATRG-LRVGLVEREDFSSG 108 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~G-~~V~lvEk~~~~~g 108 (627)
+.++||+|||||++|+++|+.|+++| ++|+|+|+++-.+|
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGG 46 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGG 46 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCC
Confidence 34589999999999999999999999 99999999874443
No 158
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.91 E-value=5.9e-06 Score=88.37 Aligned_cols=40 Identities=28% Similarity=0.476 Sum_probs=35.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGT 109 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~g~ 109 (627)
.++||+|||||++|+++|+.|+++|++|+|+|+++..+|.
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~ 43 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGR 43 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCc
Confidence 4589999999999999999999999999999998644433
No 159
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.90 E-value=1.1e-05 Score=83.57 Aligned_cols=39 Identities=26% Similarity=0.388 Sum_probs=34.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCC-CCCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERE-DFSSG 108 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~-~~~~g 108 (627)
..+||+|||||++|+++|+.|+++|++|+|+|++ +..+|
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGG 82 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGG 82 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBT
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCC
Confidence 4689999999999999999999999999999998 64443
No 160
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.89 E-value=6.4e-05 Score=82.78 Aligned_cols=34 Identities=32% Similarity=0.467 Sum_probs=31.5
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCeEEEEcCCCC
Q 006891 72 LDILVIGGGATGCGVALDAATR--GLRVGLVEREDF 105 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~--G~~V~lvEk~~~ 105 (627)
.||+|||||++|+++|+.|+++ |.+|+|||+++.
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~ 37 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEY 37 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCC
Confidence 4899999999999999999998 899999999863
No 161
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.87 E-value=1e-05 Score=88.26 Aligned_cols=39 Identities=36% Similarity=0.549 Sum_probs=34.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSG 108 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~g 108 (627)
.++||+|||||++|+++|+.|+++|++|+|+|+++..+|
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 41 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGG 41 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBT
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 357999999999999999999999999999999864443
No 162
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.87 E-value=7.3e-06 Score=87.97 Aligned_cols=59 Identities=24% Similarity=0.257 Sum_probs=45.2
Q ss_pred hHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEE-EEecCCCcEEEEEcCeEEeccCCChH
Q 006891 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGAR-IRNNLSGKEFDTYAKVVVNAAGPFCD 297 (627)
Q Consensus 231 ~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~-~~d~~~g~~~~i~A~~VV~AtG~~s~ 297 (627)
+..+...+.+.+++.|++++++++|+++..++++ . ..|+ + .+|+ +.+|.||+|+|.+.+
T Consensus 210 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~-~-~~v~~~---~~g~---i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 210 DQDMRRGLHAAMEEKGIRILCEDIIQSVSADADG-R-RVATTM---KHGE---IVADQVMLALGRMPN 269 (463)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTS-C-EEEEES---SSCE---EEESEEEECSCEEES
T ss_pred CHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCC-E-EEEEEc---CCCe---EEeCEEEEeeCcccC
Confidence 3566778888889999999999999999887644 3 3454 3 2342 899999999997653
No 163
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.84 E-value=1.1e-05 Score=86.84 Aligned_cols=39 Identities=31% Similarity=0.511 Sum_probs=33.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSG 108 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~g 108 (627)
.++||+|||||++|+++|+.|+++|++|+|+|+++..+|
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GG 53 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGG 53 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCc
Confidence 458999999999999999999999999999999874333
No 164
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.82 E-value=2.4e-05 Score=82.33 Aligned_cols=33 Identities=27% Similarity=0.490 Sum_probs=31.4
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC--eEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGL--RVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~--~V~lvEk~~ 104 (627)
.||+|||||++|+++|+.|+++|+ +|+|||+++
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~ 36 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEK 36 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCC
Confidence 589999999999999999999999 899999986
No 165
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.82 E-value=1e-05 Score=84.05 Aligned_cols=37 Identities=22% Similarity=0.400 Sum_probs=33.7
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSG 108 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~g 108 (627)
+||+|||||++|+++|+.|+++|++|+|+|+++..+|
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG 38 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGG 38 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSG
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCc
Confidence 7999999999999999999999999999999864443
No 166
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.81 E-value=3.1e-05 Score=80.84 Aligned_cols=35 Identities=23% Similarity=0.424 Sum_probs=32.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
+...|||||||++|+++|..|...+.+|+|||+++
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~ 42 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEK 42 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSS
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCC
Confidence 45789999999999999999987899999999986
No 167
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.81 E-value=0.00046 Score=72.43 Aligned_cols=63 Identities=14% Similarity=0.159 Sum_probs=48.5
Q ss_pred HHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChH-HHhhhhcCC
Q 006891 237 GLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD-SVRKLADQN 306 (627)
Q Consensus 237 ~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~-~l~~~~g~~ 306 (627)
.+.+.+++.|++++++++|+++..++ + ++.+|++. +|+ ++.||.||+|+|...+ .+++..|+.
T Consensus 189 ~l~~~l~~~GV~i~~~~~v~~i~~~~-~-~v~~V~~~---dG~--~i~aD~Vv~a~G~~p~~~l~~~~gl~ 252 (404)
T 3fg2_P 189 YFHDRHSGAGIRMHYGVRATEIAAEG-D-RVTGVVLS---DGN--TLPCDLVVVGVGVIPNVEIAAAAGLP 252 (404)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEEET-T-EEEEEEET---TSC--EEECSEEEECCCEEECCHHHHHTTCC
T ss_pred HHHHHHHhCCcEEEECCEEEEEEecC-C-cEEEEEeC---CCC--EEEcCEEEECcCCccCHHHHHhCCCC
Confidence 44455677899999999999998865 5 78888874 454 7899999999998654 366666654
No 168
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.79 E-value=1.2e-05 Score=85.53 Aligned_cols=35 Identities=17% Similarity=0.239 Sum_probs=32.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
..+||+|||||++|+++|+.|+++|++|+|||+..
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 34899999999999999999999999999999986
No 169
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.78 E-value=1.5e-05 Score=86.16 Aligned_cols=57 Identities=19% Similarity=0.104 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHcC-CEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh
Q 006891 232 SRLNVGLALTAALAG-AAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (627)
Q Consensus 232 ~~l~~~l~~~a~~~G-v~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s 296 (627)
..++..+.+.+.+.| ++|+++++|++|..++++ + .|++ .+|+ .+.||.||+|+|.+.
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~--v-~v~~---~~g~--~~~ad~vI~a~~~~~ 312 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDA--A-RVTA---RDGR--EFVAKRVVCTIPLNV 312 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSS--E-EEEE---TTCC--EEEEEEEEECCCGGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCE--E-EEEE---CCCC--EEEcCEEEECCCHHH
Confidence 468888888888888 999999999999987643 3 2433 3343 689999999999765
No 170
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.77 E-value=1.9e-05 Score=85.17 Aligned_cols=40 Identities=33% Similarity=0.429 Sum_probs=35.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCC-CeEEEEcCCCCCCC
Q 006891 69 SNPLDILVIGGGATGCGVALDAATRG-LRVGLVEREDFSSG 108 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~G-~~V~lvEk~~~~~g 108 (627)
+..+||+|||||++|+++|+.|+++| .+|+|+|+++..+|
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG 47 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGG 47 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSG
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCC
Confidence 45689999999999999999999999 79999999864333
No 171
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.77 E-value=1.9e-05 Score=85.61 Aligned_cols=38 Identities=32% Similarity=0.493 Sum_probs=34.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSG 108 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~g 108 (627)
.+||+|||||++|+++|+.|+++|++|+|+|+++..+|
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG 50 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGG 50 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCC
Confidence 58999999999999999999999999999999975444
No 172
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.76 E-value=1.3e-05 Score=85.23 Aligned_cols=33 Identities=24% Similarity=0.514 Sum_probs=31.5
Q ss_pred CcEEEECCChHHHHHHHHHHH---CCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAAT---RGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~---~G~~V~lvEk~~ 104 (627)
.||||||||++|+++|+.|++ .|++|+|||+++
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCC
Confidence 699999999999999999999 899999999976
No 173
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.74 E-value=1.3e-05 Score=86.31 Aligned_cols=39 Identities=38% Similarity=0.550 Sum_probs=35.0
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCC
Q 006891 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSS 107 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~ 107 (627)
+.+|||+|||||++|+++|+.|+++|++|+|||++.+++
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~~GG 56 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESHKLGG 56 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCC
Confidence 346999999999999999999999999999999886543
No 174
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.73 E-value=2.2e-05 Score=82.03 Aligned_cols=38 Identities=26% Similarity=0.565 Sum_probs=34.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSG 108 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~g 108 (627)
++||+|||||++|+++|+.|+++|.+|+|+|+++..+|
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG 40 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGG 40 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCC
Confidence 47999999999999999999999999999999864443
No 175
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.70 E-value=1.4e-05 Score=86.45 Aligned_cols=37 Identities=27% Similarity=0.466 Sum_probs=34.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSS 107 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~ 107 (627)
+|||+|||||.+|+++|+.|+++|++|+|||++.+++
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~~GG 44 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGAYGT 44 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSCSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 5999999999999999999999999999999987543
No 176
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.69 E-value=0.00027 Score=73.61 Aligned_cols=62 Identities=18% Similarity=0.080 Sum_probs=44.0
Q ss_pred HHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHH-HhhhhcCC
Q 006891 237 GLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDS-VRKLADQN 306 (627)
Q Consensus 237 ~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~-l~~~~g~~ 306 (627)
.+.+.+++.|++++++++|+++..+++ . ..|++ .+|+ ++.+|.||+|+|.+.+. +++.+|+.
T Consensus 192 ~l~~~l~~~gv~i~~~~~v~~i~~~~~--~-~~v~~---~~g~--~i~~d~vv~a~G~~p~~~l~~~~g~~ 254 (384)
T 2v3a_A 192 AVQAGLEGLGVRFHLGPVLASLKKAGE--G-LEAHL---SDGE--VIPCDLVVSAVGLRPRTELAFAAGLA 254 (384)
T ss_dssp HHHHHHHTTTCEEEESCCEEEEEEETT--E-EEEEE---TTSC--EEEESEEEECSCEEECCHHHHHTTCC
T ss_pred HHHHHHHHcCCEEEeCCEEEEEEecCC--E-EEEEE---CCCC--EEECCEEEECcCCCcCHHHHHHCCCC
Confidence 344455678999999999999987653 2 33554 3453 78999999999987653 66666643
No 177
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.68 E-value=0.00045 Score=74.26 Aligned_cols=58 Identities=16% Similarity=0.141 Sum_probs=40.6
Q ss_pred HHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh
Q 006891 238 LALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (627)
Q Consensus 238 l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s 296 (627)
+.+.+++.|++++++++|+++..++++ ....|.+.+..+|+..++.+|.||+|+|...
T Consensus 230 l~~~l~~~gv~i~~~~~v~~i~~~~~~-~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p 287 (478)
T 1v59_A 230 TQKFLKKQGLDFKLSTKVISAKRNDDK-NVVEIVVEDTKTNKQENLEAEVLLVAVGRRP 287 (478)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEEETTT-TEEEEEEEETTTTEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEecCC-CeEEEEEEEcCCCCceEEECCEEEECCCCCc
Confidence 334456789999999999999872112 3445666532234456799999999999654
No 178
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.65 E-value=2.1e-05 Score=84.53 Aligned_cols=35 Identities=26% Similarity=0.360 Sum_probs=32.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~ 105 (627)
+|||+|||||++|+++|+.|+++|++|+||||.+.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~ 38 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGE 38 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSS
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCC
Confidence 59999999999999999999999999999997653
No 179
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.62 E-value=3.8e-05 Score=83.10 Aligned_cols=39 Identities=28% Similarity=0.524 Sum_probs=34.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSG 108 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~g 108 (627)
..+||+|||||++|+++|+.|+++|++|+|+|+++..+|
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg 70 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGG 70 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCC
Confidence 468999999999999999999999999999999864333
No 180
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.60 E-value=3.7e-05 Score=82.40 Aligned_cols=37 Identities=41% Similarity=0.667 Sum_probs=34.1
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFS 106 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~ 106 (627)
.++||+|||||++|+++|+.|++.|++|+|||++.++
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~G 39 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKALG 39 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTT
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCCCC
Confidence 4699999999999999999999999999999998653
No 181
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.60 E-value=4.6e-05 Score=81.85 Aligned_cols=36 Identities=33% Similarity=0.615 Sum_probs=33.8
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
+.++||+|||||++|+++|+.|++.|++|+|||+++
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~ 39 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRG 39 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 456999999999999999999999999999999985
No 182
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.59 E-value=3.6e-05 Score=82.69 Aligned_cols=35 Identities=37% Similarity=0.691 Sum_probs=33.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~ 105 (627)
++||+|||||++|+++|+.|+++|++|+|||+++.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~ 36 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGA 36 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 48999999999999999999999999999999853
No 183
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.56 E-value=4.7e-05 Score=82.50 Aligned_cols=60 Identities=13% Similarity=0.118 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChH
Q 006891 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 297 (627)
Q Consensus 232 ~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~ 297 (627)
..+...+.+.+++.|++++++++|+++..++++ . ..|++ .+|+. .+.+|.||+|+|...+
T Consensus 217 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~-~~v~~---~~g~~-~~~~D~vi~a~G~~p~ 276 (500)
T 1onf_A 217 ESVINVLENDMKKNNINIVTFADVVEIKKVSDK-N-LSIHL---SDGRI-YEHFDHVIYCVGRSPD 276 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSTT-C-EEEEE---TTSCE-EEEESEEEECCCBCCT
T ss_pred hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCc-e-EEEEE---CCCcE-EEECCEEEECCCCCcC
Confidence 456677778888999999999999999876544 3 23554 34542 4899999999996543
No 184
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.55 E-value=4.6e-05 Score=82.32 Aligned_cols=59 Identities=22% Similarity=0.171 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChH
Q 006891 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 297 (627)
Q Consensus 232 ~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~ 297 (627)
..+...+.+.+++.|++|+++++|+++..++++ . ..|++ .+|+ ++.+|.||+|+|...+
T Consensus 231 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~-~-~~v~~---~~G~--~i~~D~vv~a~G~~p~ 289 (490)
T 1fec_A 231 SELRKQLTEQLRANGINVRTHENPAKVTKNADG-T-RHVVF---ESGA--EADYDVVMLAIGRVPR 289 (490)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCCEEEEEECTTS-C-EEEEE---TTSC--EEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCC-E-EEEEE---CCCc--EEEcCEEEEccCCCcC
Confidence 456667777778888888888888888776533 2 33544 2343 6788899999886653
No 185
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.55 E-value=3.6e-05 Score=82.17 Aligned_cols=36 Identities=31% Similarity=0.537 Sum_probs=33.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~ 105 (627)
.++||+|||||++|+++|+.|++.|++|+|||++.+
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~ 38 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKEL 38 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSCT
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCCC
Confidence 358999999999999999999999999999999864
No 186
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.55 E-value=0.0011 Score=70.26 Aligned_cols=62 Identities=15% Similarity=0.180 Sum_probs=45.6
Q ss_pred HHHHHHHcCCEEEcCcEEEEEEE--cCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChH-HHhhhhcCC
Q 006891 238 LALTAALAGAAVLNHAEVISLIK--DEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD-SVRKLADQN 306 (627)
Q Consensus 238 l~~~a~~~Gv~i~~~t~V~~l~~--~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~-~l~~~~g~~ 306 (627)
+.+.+++.|++++++++|+++.. ++ + ++.+|++. +|+ .+.+|.||+|+|...+ .+++.+|+.
T Consensus 197 l~~~l~~~GV~i~~~~~v~~i~~~~~~-~-~v~~v~~~---~G~--~i~~D~Vv~a~G~~p~~~l~~~~gl~ 261 (431)
T 1q1r_A 197 YEHLHREAGVDIRTGTQVCGFEMSTDQ-Q-KVTAVLCE---DGT--RLPADLVIAGIGLIPNCELASAAGLQ 261 (431)
T ss_dssp HHHHHHHHTCEEECSCCEEEEEECTTT-C-CEEEEEET---TSC--EEECSEEEECCCEEECCHHHHHTTCC
T ss_pred HHHHHHhCCeEEEeCCEEEEEEeccCC-C-cEEEEEeC---CCC--EEEcCEEEECCCCCcCcchhhccCCC
Confidence 34445678999999999999987 44 5 67777763 353 6899999999997643 466666644
No 187
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.53 E-value=6.6e-05 Score=76.81 Aligned_cols=33 Identities=27% Similarity=0.356 Sum_probs=31.7
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
+||+|||||.+|+.+|+.|+++|.+|+|+|++.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 699999999999999999999999999999975
No 188
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.53 E-value=4.9e-05 Score=79.25 Aligned_cols=51 Identities=16% Similarity=0.010 Sum_probs=40.9
Q ss_pred eechHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChH
Q 006891 228 QMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 297 (627)
Q Consensus 228 ~~~~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~ 297 (627)
.++...+...|.+.+.+.|++++++++|+++... . .+.||.||.|+|.+|.
T Consensus 94 ~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~--~-----------------~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 94 GVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL--P-----------------LADYDLVVLANGVNHK 144 (381)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC--C-----------------GGGCSEEEECCGGGGG
T ss_pred eecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc--c-----------------cccCCEEEECCCCCch
Confidence 4566788899999999999999999999776321 0 2468999999999995
No 189
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.53 E-value=0.00096 Score=71.36 Aligned_cols=34 Identities=38% Similarity=0.518 Sum_probs=31.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-.|+|||||.+|+-+|..|++.|.+|+|+|+.+
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 202 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMP 202 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCC
Confidence 3589999999999999999999999999999864
No 190
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.50 E-value=4.6e-05 Score=81.72 Aligned_cols=35 Identities=40% Similarity=0.581 Sum_probs=33.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~ 105 (627)
++||+|||||.+|+++|..|++.|++|+|||++++
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~~ 40 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGEV 40 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 59999999999999999999999999999999874
No 191
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.49 E-value=4.9e-05 Score=81.32 Aligned_cols=37 Identities=32% Similarity=0.516 Sum_probs=33.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCC
Q 006891 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~ 105 (627)
+.++||+|||||.+|+++|+.|++.|++|+|||++.+
T Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~ 39 (458)
T 1lvl_A 3 TIQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQAL 39 (458)
T ss_dssp CEECSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCT
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccCCC
Confidence 3458999999999999999999999999999999544
No 192
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.48 E-value=8.7e-05 Score=79.19 Aligned_cols=38 Identities=29% Similarity=0.396 Sum_probs=34.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSS 107 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~ 107 (627)
..+||+|||||++|+++|+.|+++|++|+|||+.+..+
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~G 158 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMG 158 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCC
Confidence 45899999999999999999999999999999986443
No 193
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.48 E-value=5.7e-05 Score=80.77 Aligned_cols=34 Identities=47% Similarity=0.760 Sum_probs=32.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
+|||+|||||++|+++|+.|++.|++|+|||+++
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 34 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEK 34 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCC
Confidence 3899999999999999999999999999999985
No 194
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.48 E-value=0.0006 Score=72.34 Aligned_cols=49 Identities=14% Similarity=0.205 Sum_probs=36.4
Q ss_pred HHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh
Q 006891 243 ALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (627)
Q Consensus 243 ~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s 296 (627)
.++|++++.+++|+.+..+.. . +.+.+..+++..++.+|.+|+|||...
T Consensus 68 ~~~~i~~~~~~~V~~id~~~~--~---~~~~~~~~~~~~~~~yd~lVIATGs~p 116 (437)
T 4eqs_A 68 DRKQITVKTYHEVIAINDERQ--T---VSVLNRKTNEQFEESYDKLILSPGASA 116 (437)
T ss_dssp HHHCCEEEETEEEEEEETTTT--E---EEEEETTTTEEEEEECSEEEECCCEEE
T ss_pred HhcCCEEEeCCeEEEEEccCc--E---EEEEeccCCceEEEEcCEEEECCCCcc
Confidence 457899999999999987652 2 333333456667899999999999753
No 195
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.47 E-value=0.0012 Score=70.51 Aligned_cols=34 Identities=32% Similarity=0.545 Sum_probs=31.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-+|+|||||.+|+-+|..|++.|.+|+|+|+.+
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 203 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAG 203 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Confidence 4689999999999999999999999999999864
No 196
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.47 E-value=5.9e-05 Score=80.63 Aligned_cols=35 Identities=34% Similarity=0.572 Sum_probs=32.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~ 105 (627)
+|||+|||||++|+++|..|++.|++|+|||++.+
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~ 37 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKGNL 37 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCC
Confidence 48999999999999999999999999999999743
No 197
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.47 E-value=5.1e-05 Score=81.63 Aligned_cols=36 Identities=31% Similarity=0.469 Sum_probs=33.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~ 105 (627)
.++||+|||||++|+++|+.|+++|++|+|||+++.
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~ 40 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNET 40 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 458999999999999999999999999999999853
No 198
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.46 E-value=0.00051 Score=72.22 Aligned_cols=61 Identities=13% Similarity=0.072 Sum_probs=45.3
Q ss_pred HHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChH-HHhhhhcCC
Q 006891 238 LALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD-SVRKLADQN 306 (627)
Q Consensus 238 l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~-~l~~~~g~~ 306 (627)
+.+.+++.|++++++++|+++..++ ++.+|++. +|+ ++.||.||+|+|...+ .+++.+|+.
T Consensus 191 l~~~l~~~GV~i~~~~~v~~i~~~~---~~~~v~~~---dg~--~i~aD~Vv~a~G~~p~~~l~~~~gl~ 252 (410)
T 3ef6_A 191 LRGLLTELGVQVELGTGVVGFSGEG---QLEQVMAS---DGR--SFVADSALICVGAEPADQLARQAGLA 252 (410)
T ss_dssp HHHHHHHHTCEEECSCCEEEEECSS---SCCEEEET---TSC--EEECSEEEECSCEEECCHHHHHTTCC
T ss_pred HHHHHHHCCCEEEeCCEEEEEeccC---cEEEEEEC---CCC--EEEcCEEEEeeCCeecHHHHHhCCCc
Confidence 3445567899999999999997644 45667763 454 7899999999998764 466666654
No 199
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.46 E-value=0.00061 Score=72.70 Aligned_cols=34 Identities=29% Similarity=0.473 Sum_probs=31.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-.|+|||||.+|+.+|..|++.|.+|+|+|+.+
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~ 200 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMD 200 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCC
Confidence 3579999999999999999999999999999864
No 200
>4e6k_G BFD, bacterioferritin-associated ferredoxin; protein complex, iron storage, iron binding, iron mobilizati ferritin, iron homeostasis; HET: HEM; 2.00A {Pseudomonas aeruginosa}
Probab=97.45 E-value=0.00011 Score=56.14 Aligned_cols=52 Identities=8% Similarity=0.037 Sum_probs=44.3
Q ss_pred cccCCCccHHHHHHHHHhcCCCChhHHHHhhcccccCChHHHhhhHHHHHHHHHHHcC
Q 006891 536 LAHGYPFLEAEVAYCARNEYCESAVDFVARRCRLAFLDTDAAGRALPRIIEIMATEHK 593 (627)
Q Consensus 536 ~~~~~~~~~aei~~a~~~e~~~~~~D~l~RRtr~~~~~~~~~~~~~~~v~~~~~~~l~ 593 (627)
+|.|+.|++.||+.||++ .+.+ .+-|+++|+.|.+ | ..|.+.|.++|+++++
T Consensus 3 VC~C~~Vt~~~I~~AI~~-Ga~t-~~~v~~~t~aGt~-C---G~C~~~i~~il~~~~~ 54 (73)
T 4e6k_G 3 VCLCQGVTDNQIRDAIYE-GCCS-YREVREATGVGTQ-C---GKCASLAKQVVRETLN 54 (73)
T ss_dssp EETTTTEEHHHHHHHHHT-TCCS-HHHHHHHHCTTSS-S---CTTHHHHHHHHHHHHH
T ss_pred EeecCCcCHHHHHHHHHh-cCCC-HHHHHHHhCCCCC-C---CchHHHHHHHHHHHHh
Confidence 689999999999999995 5555 4558999999995 6 4899999999998875
No 201
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.45 E-value=9.7e-05 Score=79.34 Aligned_cols=39 Identities=23% Similarity=0.424 Sum_probs=33.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC-eEEEEcCCCCCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGL-RVGLVEREDFSSG 108 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~~~~~g 108 (627)
..+||+|||||++|+++|+.|++.|+ +|+|+|+++..+|
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg 42 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGG 42 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCC
Confidence 35899999999999999999999999 8999999864443
No 202
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.41 E-value=0.0011 Score=71.34 Aligned_cols=35 Identities=29% Similarity=0.373 Sum_probs=31.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
..-.++|||||.+|+-+|..|++.|.+|+|+|+.+
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 218 (479)
T 2hqm_A 184 QPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGE 218 (479)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCC
Confidence 34589999999999999999999999999999864
No 203
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.41 E-value=0.0014 Score=70.26 Aligned_cols=34 Identities=29% Similarity=0.339 Sum_probs=31.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-.|+|||||.+|+-+|..|++.|.+|+|+|+.+
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 211 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLG 211 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccC
Confidence 3579999999999999999999999999999864
No 204
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.41 E-value=0.0019 Score=64.76 Aligned_cols=50 Identities=16% Similarity=0.262 Sum_probs=40.4
Q ss_pred cCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh
Q 006891 245 AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (627)
Q Consensus 245 ~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s 296 (627)
.|++++++++|+++..++ + ++.+|++.+..+|+..++.+|.||+|+|.-.
T Consensus 193 ~gv~v~~~~~v~~i~~~~-~-~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 242 (310)
T 1fl2_A 193 KNVDIILNAQTTEVKGDG-S-KVVGLEYRDRVSGDIHNIELAGIFVQIGLLP 242 (310)
T ss_dssp TTEEEESSEEEEEEEESS-S-SEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred CCeEEecCCceEEEEcCC-C-cEEEEEEEECCCCcEEEEEcCEEEEeeCCcc
Confidence 588999999999998765 5 7888988764456666899999999998543
No 205
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.39 E-value=0.0017 Score=65.73 Aligned_cols=50 Identities=18% Similarity=0.133 Sum_probs=41.7
Q ss_pred cCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh
Q 006891 245 AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (627)
Q Consensus 245 ~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s 296 (627)
.|++++.+++|+++..++ + ++.+|++.+..+|+..++.+|.||+|+|.-.
T Consensus 222 ~gv~i~~~~~v~~i~~~~-~-~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 271 (338)
T 3itj_A 222 EKIEILYNTVALEAKGDG-K-LLNALRIKNTKKNEETDLPVSGLFYAIGHTP 271 (338)
T ss_dssp TTEEEECSEEEEEEEESS-S-SEEEEEEEETTTTEEEEEECSEEEECSCEEE
T ss_pred CCeEEeecceeEEEEccc-C-cEEEEEEEECCCCceEEEEeCEEEEEeCCCC
Confidence 389999999999999876 4 6888999875566667899999999999654
No 206
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.38 E-value=0.00056 Score=73.08 Aligned_cols=50 Identities=18% Similarity=0.018 Sum_probs=39.8
Q ss_pred cCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChH
Q 006891 245 AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 297 (627)
Q Consensus 245 ~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~ 297 (627)
.|++++.+++|+++..+++ . +.|++.+..+|+..++.+|.||+|||...+
T Consensus 329 ~~v~i~~~~~v~~v~~~~~--~-~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATAQ--G-IELALRDAGSGELSVETYDAVILATGYERQ 378 (463)
T ss_dssp CCSEEETTEEEEEEEEETT--E-EEEEEEETTTCCEEEEEESEEEECCCEECC
T ss_pred CCeEEEeCCEEEEEEecCC--E-EEEEEEEcCCCCeEEEECCEEEEeeCCCCC
Confidence 6999999999999988663 3 447777645677677999999999997654
No 207
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.38 E-value=0.0016 Score=65.65 Aligned_cols=51 Identities=16% Similarity=0.214 Sum_probs=40.9
Q ss_pred HcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh
Q 006891 244 LAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (627)
Q Consensus 244 ~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s 296 (627)
+.|++++++++|+++..++ + ++.+|++.+..+|+..++.+|.||+|+|...
T Consensus 202 ~~gv~i~~~~~v~~i~~~~-~-~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 252 (319)
T 3cty_A 202 KRNIPYIMNAQVTEIVGDG-K-KVTGVKYKDRTTGEEKLIETDGVFIYVGLIP 252 (319)
T ss_dssp HTTCCEECSEEEEEEEESS-S-SEEEEEEEETTTCCEEEECCSEEEECCCEEE
T ss_pred cCCcEEEcCCeEEEEecCC-c-eEEEEEEEEcCCCceEEEecCEEEEeeCCcc
Confidence 5789999999999998865 4 6888888753356556799999999998654
No 208
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.34 E-value=0.0014 Score=69.77 Aligned_cols=34 Identities=26% Similarity=0.332 Sum_probs=31.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-.|+|||||.+|+-+|..|++.|.+|+|+|+.+
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 200 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFD 200 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 4589999999999999999999999999999864
No 209
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.34 E-value=9.2e-05 Score=80.04 Aligned_cols=32 Identities=41% Similarity=0.663 Sum_probs=30.7
Q ss_pred CCcEEEECCChHHHHHHHHHHH-CCCeEEEEcC
Q 006891 71 PLDILVIGGGATGCGVALDAAT-RGLRVGLVER 102 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~-~G~~V~lvEk 102 (627)
+|||+|||||++|+++|+.|++ +|++|+|||+
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 5899999999999999999999 9999999994
No 210
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.32 E-value=0.0014 Score=69.65 Aligned_cols=35 Identities=29% Similarity=0.398 Sum_probs=32.6
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
...+|+|||||.+|+.+|..|++.|.+|+|+|+.+
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 182 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD 182 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCc
Confidence 45799999999999999999999999999999865
No 211
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.32 E-value=0.0014 Score=70.43 Aligned_cols=35 Identities=37% Similarity=0.589 Sum_probs=32.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
..-+|+|||||.+|+-+|..|++.|.+|+|+|+.+
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 219 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERND 219 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGG
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC
Confidence 34689999999999999999999999999999864
No 212
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.32 E-value=0.0023 Score=68.42 Aligned_cols=34 Identities=35% Similarity=0.467 Sum_probs=31.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-.|+|||||.+|+-+|..|++.|.+|+|+|+.+
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 207 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAP 207 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCC
Confidence 4589999999999999999999999999999864
No 213
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.31 E-value=0.0016 Score=69.68 Aligned_cols=62 Identities=18% Similarity=0.148 Sum_probs=45.1
Q ss_pred HHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChH-HHhhhhcCC
Q 006891 237 GLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD-SVRKLADQN 306 (627)
Q Consensus 237 ~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~-~l~~~~g~~ 306 (627)
.+.+.+++.|++++++++|+++..++ + ++. |++. +|+ ++.+|.||+|+|...+ .+.+.+|+.
T Consensus 207 ~l~~~l~~~GV~i~~~~~v~~i~~~~-~-~v~-v~~~---~g~--~i~aD~Vv~a~G~~p~~~l~~~~gl~ 269 (472)
T 3iwa_A 207 MLRHDLEKNDVVVHTGEKVVRLEGEN-G-KVA-RVIT---DKR--TLDADLVILAAGVSPNTQLARDAGLE 269 (472)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEESS-S-BEE-EEEE---SSC--EEECSEEEECSCEEECCHHHHHHTCC
T ss_pred HHHHHHHhcCCEEEeCCEEEEEEccC-C-eEE-EEEe---CCC--EEEcCEEEECCCCCcCHHHHHhCCcc
Confidence 44455567899999999999998855 4 554 5553 344 7899999999998754 466656644
No 214
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.30 E-value=0.0012 Score=70.71 Aligned_cols=34 Identities=29% Similarity=0.373 Sum_probs=31.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-.|+|||||.+|+-+|..|++.|.+|+|+|+.+
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~ 210 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFAS 210 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Confidence 4589999999999999999999999999999864
No 215
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.30 E-value=0.0027 Score=68.15 Aligned_cols=34 Identities=24% Similarity=0.336 Sum_probs=31.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-.|+|||||.+|+-+|..|++.|.+|+|+++.+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 220 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHD 220 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCC
Confidence 3579999999999999999999999999999854
No 216
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.28 E-value=0.00022 Score=79.97 Aligned_cols=39 Identities=28% Similarity=0.488 Sum_probs=34.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSG 108 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~g 108 (627)
..+||+|||||++|+++|+.|+++|++|+|+|+.+..+|
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg 144 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 144 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBT
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 458999999999999999999999999999999864433
No 217
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.28 E-value=0.00024 Score=80.43 Aligned_cols=38 Identities=24% Similarity=0.374 Sum_probs=34.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSS 107 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~ 107 (627)
..+||+|||||++|+++|+.|+++|++|+|||+.+..+
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~G 425 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIG 425 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcC
Confidence 45899999999999999999999999999999986433
No 218
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.27 E-value=0.0018 Score=69.95 Aligned_cols=34 Identities=29% Similarity=0.509 Sum_probs=31.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-.++|||||..|+-+|..+++.|.+|+|+|+.+
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 215 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQD 215 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC
Confidence 3579999999999999999999999999999864
No 219
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.27 E-value=0.00025 Score=81.07 Aligned_cols=39 Identities=28% Similarity=0.488 Sum_probs=34.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSG 108 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~g 108 (627)
..+||+|||||++|+++|+.|+++|++|+|+|+.+..+|
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG 315 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 315 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCC
Confidence 357999999999999999999999999999999864443
No 220
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.26 E-value=0.0022 Score=68.47 Aligned_cols=34 Identities=32% Similarity=0.399 Sum_probs=31.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-.|+|||||.+|+-+|..|++.|.+|+|+|+.+
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~ 199 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALED 199 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 3589999999999999999999999999999864
No 221
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.24 E-value=0.00019 Score=75.42 Aligned_cols=64 Identities=17% Similarity=0.147 Sum_probs=48.1
Q ss_pred hHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChH-HHhhhhcCC
Q 006891 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD-SVRKLADQN 306 (627)
Q Consensus 231 ~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~-~l~~~~g~~ 306 (627)
+..+...+.+.+++.|++++++++|+++. + + . |++ .+|+ ++.+|.||+|+|...+ .+++.+|+.
T Consensus 186 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~--~-~-~---v~~---~~g~--~i~~D~vi~a~G~~p~~~l~~~~gl~ 250 (408)
T 2gqw_A 186 PATLADFVARYHAAQGVDLRFERSVTGSV--D-G-V---VLL---DDGT--RIAADMVVVGIGVLANDALARAAGLA 250 (408)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESCCEEEEE--T-T-E---EEE---TTSC--EEECSEEEECSCEEECCHHHHHHTCC
T ss_pred CHHHHHHHHHHHHHcCcEEEeCCEEEEEE--C-C-E---EEE---CCCC--EEEcCEEEECcCCCccHHHHHhCCCC
Confidence 45667778888889999999999999997 3 3 2 445 2453 7899999999997654 466666654
No 222
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.23 E-value=0.0026 Score=65.26 Aligned_cols=59 Identities=17% Similarity=0.129 Sum_probs=44.3
Q ss_pred HHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChH-HHhhhhc
Q 006891 243 ALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD-SVRKLAD 304 (627)
Q Consensus 243 ~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~-~l~~~~g 304 (627)
++.|++++++++|+++..++ + ++.+|++.. .+|+...+.+|.||+|+|...+ .+++.++
T Consensus 213 ~~~gv~i~~~~~v~~i~~~~-~-~v~~v~~~~-~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~ 272 (360)
T 3ab1_A 213 ANGTIDVYLETEVASIEESN-G-VLTRVHLRS-SDGSKWTVEADRLLILIGFKSNLGPLARWD 272 (360)
T ss_dssp HHTSEEEESSEEEEEEEEET-T-EEEEEEEEE-TTCCEEEEECSEEEECCCBCCSCGGGGGSS
T ss_pred hcCceEEEcCcCHHHhccCC-C-ceEEEEEEe-cCCCeEEEeCCEEEECCCCCCCHHHHHhhc
Confidence 46789999999999998865 5 788888862 3565568999999999996543 2444433
No 223
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.23 E-value=0.0045 Score=66.58 Aligned_cols=55 Identities=18% Similarity=0.120 Sum_probs=39.4
Q ss_pred HHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCC
Q 006891 239 ALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPF 295 (627)
Q Consensus 239 ~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~ 295 (627)
.+.+++.|+++++++.|.++...+++ .+ .|++.+..+|+..++.+|.||+|+|.-
T Consensus 232 ~~~l~~~gv~~~~~~~v~~i~~~~~~-~~-~v~~~~~~~g~~~~~~~D~vi~a~G~~ 286 (488)
T 3dgz_A 232 TEHMESHGTQFLKGCVPSHIKKLPTN-QL-QVTWEDHASGKEDTGTFDTVLWAIGRV 286 (488)
T ss_dssp HHHHHHTTCEEEETEEEEEEEECTTS-CE-EEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred HHHHHHCCCEEEeCCEEEEEEEcCCC-cE-EEEEEeCCCCeeEEEECCEEEEcccCC
Confidence 34446689999999999999875544 33 366655333554568999999999953
No 224
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.23 E-value=0.0031 Score=67.36 Aligned_cols=34 Identities=29% Similarity=0.430 Sum_probs=31.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-.|+|||||.+|+-+|..|++.|.+|+|+|+.+
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 204 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLP 204 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCC
Confidence 3589999999999999999999999999999864
No 225
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.20 E-value=0.0003 Score=79.05 Aligned_cols=38 Identities=29% Similarity=0.496 Sum_probs=34.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSS 107 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~ 107 (627)
..+||+|||||++|+++|+.|+++|++|+|||+++..+
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~g 409 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIG 409 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 45899999999999999999999999999999986433
No 226
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.19 E-value=0.0017 Score=70.00 Aligned_cols=34 Identities=32% Similarity=0.342 Sum_probs=31.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHC---CCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATR---GLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~---G~~V~lvEk~~ 104 (627)
.-.++|||||.+|+-+|..|++. |.+|+|+|+.+
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~ 223 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGD 223 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCC
Confidence 35899999999999999999999 99999999975
No 227
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.15 E-value=0.0051 Score=62.30 Aligned_cols=59 Identities=19% Similarity=0.071 Sum_probs=43.4
Q ss_pred HHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChH-HHhhhhc
Q 006891 243 ALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD-SVRKLAD 304 (627)
Q Consensus 243 ~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~-~l~~~~g 304 (627)
++.|++++++++|+++..+ + ++.+|++.+..+|+..++.+|.||+|+|...+ .+.+.++
T Consensus 202 ~~~gv~v~~~~~v~~i~~~--~-~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~ 261 (335)
T 2zbw_A 202 EEGRLEVLTPYELRRVEGD--E-RVRWAVVFHNQTQEELALEVDAVLILAGYITKLGPLANWG 261 (335)
T ss_dssp HTTSSEEETTEEEEEEEES--S-SEEEEEEEETTTCCEEEEECSEEEECCCEEEECGGGGGSC
T ss_pred ccCCeEEecCCcceeEccC--C-CeeEEEEEECCCCceEEEecCEEEEeecCCCCchHhhhcc
Confidence 4568999999999999874 3 67778886422565568999999999997654 3444433
No 228
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.14 E-value=0.0026 Score=67.75 Aligned_cols=34 Identities=24% Similarity=0.428 Sum_probs=31.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-.|+|||||.+|+-+|..|++.|.+|+|+|+.+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 182 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHE 182 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 3579999999999999999999999999999864
No 229
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.11 E-value=0.004 Score=67.15 Aligned_cols=34 Identities=15% Similarity=0.195 Sum_probs=31.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-.|+|||||.+|+-+|..|++.|.+|+|+|+.+
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 209 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGN 209 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCC
Confidence 3579999999999999999999999999999875
No 230
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.11 E-value=0.00037 Score=73.79 Aligned_cols=58 Identities=12% Similarity=0.009 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHH
Q 006891 234 LNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSV 299 (627)
Q Consensus 234 l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l 299 (627)
+...+.+.+++.|++++++++|+++.. + . +++++ .+++..++.+|.||+|+|......
T Consensus 202 ~~~~l~~~l~~~GV~i~~~~~v~~v~~---~-~---v~~~~-~~~~g~~i~~D~vv~a~G~~~~~~ 259 (430)
T 3h28_A 202 SKRLVEDLFAERNIDWIANVAVKAIEP---D-K---VIYED-LNGNTHEVPAKFTMFMPSFQGPEV 259 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEECS---S-E---EEEEC-TTSCEEEEECSEEEEECEEECCHH
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEeC---C-e---EEEEe-cCCCceEEeeeEEEECCCCccchh
Confidence 456667778889999999999999843 2 2 44544 234456899999999999665443
No 231
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.11 E-value=0.0068 Score=60.58 Aligned_cols=50 Identities=14% Similarity=0.039 Sum_probs=39.5
Q ss_pred cCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh
Q 006891 245 AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (627)
Q Consensus 245 ~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s 296 (627)
.|++++++++++++..++ + ++.+|++.+..+|+..++.+|.||+|+|.-.
T Consensus 192 ~gv~v~~~~~v~~i~~~~-~-~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 241 (311)
T 2q0l_A 192 DKIEFLTPYVVEEIKGDA-S-GVSSLSIKNTATNEKRELVVPGFFIFVGYDV 241 (311)
T ss_dssp TTEEEETTEEEEEEEEET-T-EEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred CCeEEEeCCEEEEEECCC-C-cEeEEEEEecCCCceEEEecCEEEEEecCcc
Confidence 588999999999998765 4 6778888743356656899999999999644
No 232
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.10 E-value=0.00031 Score=77.81 Aligned_cols=35 Identities=29% Similarity=0.540 Sum_probs=32.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
...|||+|||||.+|+++|..|+++|++|+|||+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 45699999999999999999999999999999984
No 233
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.09 E-value=0.0058 Score=61.61 Aligned_cols=49 Identities=14% Similarity=0.123 Sum_probs=38.9
Q ss_pred cCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh
Q 006891 245 AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (627)
Q Consensus 245 ~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s 296 (627)
.|++++++++|+++..+ + ++.+|++.+..+|+..++.+|.||+|+|.-.
T Consensus 201 ~gv~i~~~~~v~~i~~~--~-~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 249 (325)
T 2q7v_A 201 PKMKFIWDTAVEEIQGA--D-SVSGVKLRNLKTGEVSELATDGVFIFIGHVP 249 (325)
T ss_dssp TTEEEECSEEEEEEEES--S-SEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred CCceEecCCceEEEccC--C-cEEEEEEEECCCCcEEEEEcCEEEEccCCCC
Confidence 48899999999999874 4 6778888753356656899999999998544
No 234
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.08 E-value=0.00044 Score=73.28 Aligned_cols=34 Identities=24% Similarity=0.460 Sum_probs=32.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC--eEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGL--RVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~--~V~lvEk~~ 104 (627)
.+||+|||||++|+++|..|+++|. +|+|||+.+
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDAT 39 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCC
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCC
Confidence 5899999999999999999999998 799999975
No 235
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.08 E-value=0.0043 Score=66.45 Aligned_cols=34 Identities=32% Similarity=0.375 Sum_probs=31.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-.|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 213 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMD 213 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Confidence 4579999999999999999999999999999854
No 236
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.07 E-value=0.002 Score=68.79 Aligned_cols=34 Identities=29% Similarity=0.596 Sum_probs=31.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-.|+|||||.+|+-+|..|++.|.+|+|+|+.+
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 204 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARE 204 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCC
Confidence 3589999999999999999999999999999865
No 237
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.07 E-value=0.0038 Score=65.48 Aligned_cols=34 Identities=38% Similarity=0.641 Sum_probs=31.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-.|+|||||.+|+-+|..|++.|.+|+|+|+.+
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 178 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQP 178 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC
Confidence 3589999999999999999999999999999975
No 238
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.06 E-value=0.0072 Score=60.54 Aligned_cols=58 Identities=12% Similarity=-0.005 Sum_probs=45.1
Q ss_pred cCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChH-HHhhhhcC
Q 006891 245 AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD-SVRKLADQ 305 (627)
Q Consensus 245 ~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~-~l~~~~g~ 305 (627)
.|++++.+++|+++..+ + ++.+|++.+..+|+...+.+|.||+|+|...+ .+.+.+++
T Consensus 203 ~gv~~~~~~~v~~i~~~--~-~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~g~ 261 (323)
T 3f8d_A 203 PNVEFVLNSVVKEIKGD--K-VVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGI 261 (323)
T ss_dssp TTEEEECSEEEEEEEES--S-SEEEEEEEETTTCCEEEEECSEEEECCCEECCHHHHHHTTC
T ss_pred CCcEEEeCCEEEEEecc--C-ceeEEEEEECCCCceEEEEcCEEEEEECCCCChhHHhhcCe
Confidence 48899999999999875 3 67788887655576668999999999997664 56665554
No 239
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.06 E-value=0.00041 Score=72.23 Aligned_cols=34 Identities=18% Similarity=0.327 Sum_probs=31.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCC--CeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRG--LRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G--~~V~lvEk~~ 104 (627)
++||+|||||++|+++|+.|+++| .+|+|+|+++
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 589999999999999999999999 4689999874
No 240
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.06 E-value=0.0032 Score=67.82 Aligned_cols=52 Identities=15% Similarity=0.148 Sum_probs=38.6
Q ss_pred HHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh
Q 006891 238 LALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (627)
Q Consensus 238 l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s 296 (627)
+.+.+++.|++++++++|+++..++++ ...|++ .+|+ ++.+|.||+|+|...
T Consensus 241 l~~~l~~~GV~i~~~~~v~~i~~~~~~--~~~v~~---~~G~--~i~~D~vv~a~G~~p 292 (495)
T 2wpf_A 241 VTKQLTANGIEIMTNENPAKVSLNTDG--SKHVTF---ESGK--TLDVDVVMMAIGRIP 292 (495)
T ss_dssp HHHHHHHTTCEEEESCCEEEEEECTTS--CEEEEE---TTSC--EEEESEEEECSCEEE
T ss_pred HHHHHHhCCCEEEeCCEEEEEEEcCCc--eEEEEE---CCCc--EEEcCEEEECCCCcc
Confidence 344456789999999999999886543 234555 3454 789999999999654
No 241
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.03 E-value=0.0049 Score=67.58 Aligned_cols=34 Identities=26% Similarity=0.378 Sum_probs=31.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-.|+|||||.+|+-+|..|++.|.+|+++++.+
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 184 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELAD 184 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCC
Confidence 3589999999999999999999999999999864
No 242
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.02 E-value=0.0034 Score=67.05 Aligned_cols=34 Identities=29% Similarity=0.397 Sum_probs=31.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-.++|||+|..|+-.|..+++.|.+|+++++.+
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~ 203 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGK 203 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC
Confidence 4589999999999999999999999999999875
No 243
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.00 E-value=0.0067 Score=65.27 Aligned_cols=34 Identities=24% Similarity=0.393 Sum_probs=31.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-.|+|||||.+|+-+|..|++.|.+|+|+|+.+
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 207 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSG 207 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC
Confidence 3579999999999999999999999999999865
No 244
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=96.98 E-value=0.002 Score=69.14 Aligned_cols=34 Identities=38% Similarity=0.572 Sum_probs=31.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-.|+|||||.+|+-+|..|++.|.+|+|+|+.+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~ 218 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMD 218 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC
Confidence 4589999999999999999999999999999864
No 245
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.95 E-value=0.00049 Score=73.39 Aligned_cols=35 Identities=20% Similarity=0.280 Sum_probs=32.5
Q ss_pred CCcEEEECCChHHHHHHHHHHH-C------CCeEEEEcCCCC
Q 006891 71 PLDILVIGGGATGCGVALDAAT-R------GLRVGLVEREDF 105 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~-~------G~~V~lvEk~~~ 105 (627)
.+||+|||||++|+.+|..|++ . |++|+|||+.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~ 44 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT 44 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCC
Confidence 5799999999999999999999 7 999999999854
No 246
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=96.94 E-value=0.0083 Score=60.62 Aligned_cols=53 Identities=17% Similarity=0.156 Sum_probs=39.9
Q ss_pred HcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh
Q 006891 244 LAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (627)
Q Consensus 244 ~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s 296 (627)
+.|++++++++|+++..++++.++.+|.+.+..+|+..++.+|.||+|+|.-.
T Consensus 207 ~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 259 (333)
T 1vdc_A 207 NPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEP 259 (333)
T ss_dssp CTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred CCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCcc
Confidence 46889999999999987653114667888753356556899999999999654
No 247
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.94 E-value=0.0065 Score=65.86 Aligned_cols=49 Identities=16% Similarity=0.284 Sum_probs=40.2
Q ss_pred cCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCC
Q 006891 245 AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPF 295 (627)
Q Consensus 245 ~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~ 295 (627)
.|+++++++.++++..++ + ++.+|++.+..+|+...+.+|.||+|+|.-
T Consensus 404 ~gV~v~~~~~v~~i~~~~-~-~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 452 (521)
T 1hyu_A 404 KNVDIILNAQTTEVKGDG-S-KVVGLEYRDRVSGDIHSVALAGIFVQIGLL 452 (521)
T ss_dssp TTEEEECSEEEEEEEECS-S-SEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred CCcEEEeCCEEEEEEcCC-C-cEEEEEEEeCCCCceEEEEcCEEEECcCCC
Confidence 478999999999998765 5 788898887456766789999999999953
No 248
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=96.94 E-value=0.008 Score=63.88 Aligned_cols=33 Identities=21% Similarity=0.183 Sum_probs=30.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
-.++|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 180 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLE 180 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccC
Confidence 579999999999999999999999999999864
No 249
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=96.93 E-value=0.004 Score=66.96 Aligned_cols=34 Identities=26% Similarity=0.362 Sum_probs=31.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-.|+|||||.+|+-+|..|++.|.+|+|+|+.+
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 227 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVD 227 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEccc
Confidence 3579999999999999999999999999999864
No 250
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.92 E-value=0.00077 Score=74.07 Aligned_cols=58 Identities=14% Similarity=0.074 Sum_probs=47.5
Q ss_pred hHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCC-CCeEEEEEEEecCCCcEEEEEcCeEEeccCC
Q 006891 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEA-SNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 294 (627)
Q Consensus 231 ~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~-g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~ 294 (627)
...+..+|.+.+..+|++++++++|.+|..+++ | +++||+. .+|+ .++||.||.....
T Consensus 377 ~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g-~v~gV~~---~~Ge--~i~A~~VVs~~~~ 435 (650)
T 1vg0_A 377 QGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESR-KCKAVID---QFGQ--RIISKHFIIEDSY 435 (650)
T ss_dssp TTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTC-CEEEEEE---TTSC--EEECSEEEEEGGG
T ss_pred hhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCC-eEEEEEe---CCCC--EEEcCEEEEChhh
Confidence 367889999999999999999999999988764 6 8999874 3465 6899999885443
No 251
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.89 E-value=0.00054 Score=70.87 Aligned_cols=34 Identities=18% Similarity=0.397 Sum_probs=31.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~ 105 (627)
-.||+|||||.+|+++|..|+++| +|+|||+++.
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~ 41 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPV 41 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCC
Confidence 369999999999999999999999 9999999874
No 252
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.86 E-value=0.0008 Score=71.80 Aligned_cols=37 Identities=22% Similarity=0.289 Sum_probs=33.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCC--CeEEEEcCCCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRG--LRVGLVEREDFS 106 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G--~~V~lvEk~~~~ 106 (627)
..+||+|||||++|+.+|..|+++| ++|+|||+.+..
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVP 43 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcC
Confidence 4589999999999999999999998 999999998643
No 253
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.84 E-value=0.00083 Score=78.97 Aligned_cols=38 Identities=21% Similarity=0.431 Sum_probs=34.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEcCCCCCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVEREDFSSG 108 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~~~~~g 108 (627)
.+||+|||||.+|+++|+.|+++|+ +|+|+|+.+..+|
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG 225 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGG 225 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCST
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCc
Confidence 4799999999999999999999999 7999999864443
No 254
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.77 E-value=0.00072 Score=72.90 Aligned_cols=68 Identities=16% Similarity=0.118 Sum_probs=50.5
Q ss_pred hHHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChH-HHhhhhcCC
Q 006891 231 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD-SVRKLADQN 306 (627)
Q Consensus 231 ~~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~-~l~~~~g~~ 306 (627)
+..+...+.+.++++|++++++++|+++..++ + .+ .|++ .+|+ ++.||.||+|+|...+ .+++.+|+.
T Consensus 225 ~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~-~-~~-~v~l---~dG~--~i~aD~Vv~a~G~~pn~~l~~~~gl~ 293 (493)
T 1m6i_A 225 PEYLSNWTMEKVRREGVKVMPNAIVQSVGVSS-G-KL-LIKL---KDGR--KVETDHIVAAVGLEPNVELAKTGGLE 293 (493)
T ss_dssp CHHHHHHHHHHHHTTTCEEECSCCEEEEEEET-T-EE-EEEE---TTSC--EEEESEEEECCCEEECCTTHHHHTCC
T ss_pred CHHHHHHHHHHHHhcCCEEEeCCEEEEEEecC-C-eE-EEEE---CCCC--EEECCEEEECCCCCccHHHHHHcCCc
Confidence 45667777788889999999999999998755 3 44 4555 3454 7899999999997654 355555543
No 255
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=96.77 E-value=0.00097 Score=70.06 Aligned_cols=33 Identities=24% Similarity=0.471 Sum_probs=31.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCe--EEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLR--VGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~--V~lvEk~~ 104 (627)
.||||||||++|+++|+.|+++|.+ |+|||+++
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~ 37 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEP 37 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSS
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCC
Confidence 4899999999999999999999987 99999975
No 256
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.76 E-value=0.011 Score=63.01 Aligned_cols=52 Identities=13% Similarity=0.106 Sum_probs=38.3
Q ss_pred cCCEEEcCcEEEEEEEcC-CCCeEEEEEEEecC------------CCcEEEEEcCeEEeccCCChH
Q 006891 245 AGAAVLNHAEVISLIKDE-ASNRIIGARIRNNL------------SGKEFDTYAKVVVNAAGPFCD 297 (627)
Q Consensus 245 ~Gv~i~~~t~V~~l~~~~-~g~~v~gV~~~d~~------------~g~~~~i~A~~VV~AtG~~s~ 297 (627)
.|+++++++.+++|..++ ++ ++.+|++.+.. +|+..++.+|.||.|+|.-.+
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~-~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~ 334 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGR-RAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSR 334 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSS-SEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECC
T ss_pred ceEEEECCCChheEEcCCCCc-eEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCC
Confidence 899999999999998753 22 57777765311 344468999999999996553
No 257
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.76 E-value=0.00055 Score=76.25 Aligned_cols=34 Identities=24% Similarity=0.447 Sum_probs=32.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCC--------CeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRG--------LRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G--------~~V~lvEk~~ 104 (627)
..+|+|||||++|+++|+.|+++| ++|+|+|+++
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~ 97 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADP 97 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccC
Confidence 368999999999999999999999 9999999986
No 258
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=96.76 E-value=0.013 Score=58.50 Aligned_cols=50 Identities=14% Similarity=0.139 Sum_probs=40.9
Q ss_pred HcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh
Q 006891 244 LAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (627)
Q Consensus 244 ~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s 296 (627)
+.|++++++++|+++..++ + ++.+|++.. .+|+..++.+|.||+|+|.-.
T Consensus 195 ~~gv~~~~~~~v~~i~~~~-~-~~~~v~~~~-~~g~~~~~~~D~vv~a~G~~p 244 (315)
T 3r9u_A 195 NEKIELITSASVDEVYGDK-M-GVAGVKVKL-KDGSIRDLNVPGIFTFVGLNV 244 (315)
T ss_dssp CTTEEEECSCEEEEEEEET-T-EEEEEEEEC-TTSCEEEECCSCEEECSCEEE
T ss_pred cCCeEEEeCcEEEEEEcCC-C-cEEEEEEEc-CCCCeEEeecCeEEEEEcCCC
Confidence 5689999999999998876 5 788888873 456666899999999999643
No 259
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=96.76 E-value=0.0067 Score=66.85 Aligned_cols=34 Identities=38% Similarity=0.602 Sum_probs=31.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-.|+|||||.+|+-+|..|++.|.+|+++++.+
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 220 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMAN 220 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 3579999999999999999999999999998854
No 260
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=96.75 E-value=0.021 Score=61.84 Aligned_cols=32 Identities=28% Similarity=0.207 Sum_probs=29.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
-.|+|||||.+|+-+|..|++.|.+|+|+++.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 46999999999999999999999999999874
No 261
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.68 E-value=0.014 Score=62.65 Aligned_cols=33 Identities=30% Similarity=0.342 Sum_probs=29.2
Q ss_pred CcEEEECCChHHHHHHHHHHH----CCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAAT----RGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~----~G~~V~lvEk~~ 104 (627)
-.|+|||||.+|+-+|..|++ .|.+|+++++.+
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~ 217 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEK 217 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCc
Confidence 479999999999999999987 478999999864
No 262
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=96.56 E-value=0.017 Score=58.02 Aligned_cols=51 Identities=12% Similarity=0.020 Sum_probs=40.4
Q ss_pred HHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh
Q 006891 243 ALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (627)
Q Consensus 243 ~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s 296 (627)
++.|++++.+++|+++..++ .+.+|++.+..+++..++.+|.||+|+|.-.
T Consensus 200 ~~~gv~~~~~~~v~~i~~~~---~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p 250 (332)
T 3lzw_A 200 HASKVNVLTPFVPAELIGED---KIEQLVLEEVKGDRKEILEIDDLIVNYGFVS 250 (332)
T ss_dssp HHSSCEEETTEEEEEEECSS---SCCEEEEEETTSCCEEEEECSEEEECCCEEC
T ss_pred hcCCeEEEeCceeeEEecCC---ceEEEEEEecCCCceEEEECCEEEEeeccCC
Confidence 45789999999999998754 3466888775566667899999999999544
No 263
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.50 E-value=0.038 Score=60.91 Aligned_cols=32 Identities=28% Similarity=0.158 Sum_probs=29.7
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
-.|+|||||.+|+-+|..|++.|.+|+|+++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 37999999999999999999999999999875
No 264
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.44 E-value=0.021 Score=67.13 Aligned_cols=32 Identities=38% Similarity=0.477 Sum_probs=29.8
Q ss_pred cEEEECCChHHHHHHHHHHHCCC-eEEEEcCCC
Q 006891 73 DILVIGGGATGCGVALDAATRGL-RVGLVERED 104 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~~ 104 (627)
.|+|||||.+|+-+|..|++.|. +|+|+++.+
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 89999999999999999999997 899999854
No 265
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.40 E-value=0.011 Score=62.80 Aligned_cols=60 Identities=15% Similarity=0.008 Sum_probs=42.0
Q ss_pred HHHHHHHHH------cCCEEEcCcEEEEEEEcCCCCeEEEEEEEec-------------CCCcEEEEEcCeEEeccCCCh
Q 006891 236 VGLALTAAL------AGAAVLNHAEVISLIKDEASNRIIGARIRNN-------------LSGKEFDTYAKVVVNAAGPFC 296 (627)
Q Consensus 236 ~~l~~~a~~------~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~-------------~~g~~~~i~A~~VV~AtG~~s 296 (627)
..+.+.+.+ .|+++++++.++++..+ + ++.+|++.+. .+|+..++.++.||.|+|.-.
T Consensus 250 ~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~--~-~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p 326 (456)
T 1lqt_A 250 KVLRGYADREPRPGHRRMVFRFLTSPIEIKGK--R-KVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRG 326 (456)
T ss_dssp HHHHHHHTCC-CTTSEEEEEECSEEEEEEECS--S-SCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEEC
T ss_pred HHHHHHhhcCCCCCCceEEEEeCCCCeEEecC--C-cEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEcccccc
Confidence 444455555 79999999999999764 4 6666776521 134445799999999999765
Q ss_pred HH
Q 006891 297 DS 298 (627)
Q Consensus 297 ~~ 298 (627)
..
T Consensus 327 ~~ 328 (456)
T 1lqt_A 327 VP 328 (456)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 266
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=96.39 E-value=0.01 Score=60.13 Aligned_cols=50 Identities=22% Similarity=0.209 Sum_probs=37.6
Q ss_pred HcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh
Q 006891 244 LAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (627)
Q Consensus 244 ~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s 296 (627)
+.|++++++++|+++..++ ++.+|.+.+..+|+..++.+|.||+|+|.-.
T Consensus 203 ~~gV~v~~~~~v~~i~~~~---~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 252 (335)
T 2a87_A 203 NDKIRFLTNHTVVAVDGDT---TVTGLRVRDTNTGAETTLPVTGVFVAIGHEP 252 (335)
T ss_dssp CTTEEEECSEEEEEEECSS---SCCEEEEEEETTSCCEEECCSCEEECSCEEE
T ss_pred cCCcEEEeCceeEEEecCC---cEeEEEEEEcCCCceEEeecCEEEEccCCcc
Confidence 4688999999999997654 4566777643345546899999999999643
No 267
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=96.29 E-value=0.012 Score=63.26 Aligned_cols=59 Identities=14% Similarity=0.029 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCc--EEEEEcCeEEeccCCChH
Q 006891 233 RLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGK--EFDTYAKVVVNAAGPFCD 297 (627)
Q Consensus 233 ~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~--~~~i~A~~VV~AtG~~s~ 297 (627)
.+...+.+..++.|++++++++|+++..+ + .+..+.. .+|+ ..+|.+|.||.|+|.-.+
T Consensus 273 ~~~~~~~~~L~~~GV~v~~~~~v~~v~~~--~-~~~~~~~---~dg~~~~~~i~ad~viwa~Gv~~~ 333 (502)
T 4g6h_A 273 KLSSYAQSHLENTSIKVHLRTAVAKVEEK--Q-LLAKTKH---EDGKITEETIPYGTLIWATGNKAR 333 (502)
T ss_dssp HHHHHHHHHHHHTTCEEETTEEEEEECSS--E-EEEEEEC---TTSCEEEEEEECSEEEECCCEECC
T ss_pred HHHHHHHHHHHhcceeeecCceEEEEeCC--c-eEEEEEe---cCcccceeeeccCEEEEccCCcCC
Confidence 34455666778899999999999998532 2 2222222 2333 247999999999996543
No 268
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=96.29 E-value=0.038 Score=59.92 Aligned_cols=34 Identities=21% Similarity=0.225 Sum_probs=30.8
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
..-.++|||||.+|+-.|..+++.|.+|+|+++.
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~ 255 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSLGYDVTVAVRS 255 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESS
T ss_pred CCceEEEECCCHHHHHHHHHHHhcCCeEEEeccc
Confidence 3457999999999999999999999999999864
No 269
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.28 E-value=0.011 Score=62.74 Aligned_cols=33 Identities=30% Similarity=0.474 Sum_probs=29.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC-eEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGL-RVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~~ 104 (627)
-.|+|||||.+|+-+|..+.+.|. +|+++++.+
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRD 298 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCC
Confidence 479999999999999999999998 599998764
No 270
>2pq4_B Periplasmic nitrate reductase precursor; NAPD/NAPA1-35, mixed beta-alpha sandwich structure, protein- peptide complex, alpha-helix; NMR {Escherichia coli}
Probab=96.21 E-value=0.0021 Score=41.02 Aligned_cols=18 Identities=39% Similarity=0.350 Sum_probs=13.9
Q ss_pred CchhhhhHHHHHHHHHhh
Q 006891 1 MSATRIRRFGAVLAAAAG 18 (627)
Q Consensus 1 msrR~f~~~~a~~ga~aa 18 (627)
||||+|||+.++++++++
T Consensus 3 lsRR~FLK~~aaa~Aaaa 20 (35)
T 2pq4_B 3 LSRRSFMKANAVAAAAAA 20 (35)
T ss_dssp CCSHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHH
Confidence 589999998887666544
No 271
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.16 E-value=0.021 Score=60.55 Aligned_cols=33 Identities=30% Similarity=0.545 Sum_probs=31.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
-.|+|||||.+|+-+|..|++.|.+|+|+++.+
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 181 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGE 181 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC
Confidence 489999999999999999999999999999864
No 272
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.05 E-value=0.016 Score=61.17 Aligned_cols=34 Identities=32% Similarity=0.453 Sum_probs=31.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-.|+|||||.+|+-.|..+++.|.+|+|+|+.+
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 180 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD 180 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSS
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeec
Confidence 3579999999999999999999999999999864
No 273
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=96.00 E-value=0.0035 Score=67.57 Aligned_cols=34 Identities=15% Similarity=0.309 Sum_probs=31.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
+..|||||||.+|+.+|..|.+.+++|+|||+++
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSS
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCC
Confidence 4579999999999999999999999999999975
No 274
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=95.94 E-value=0.0048 Score=64.37 Aligned_cols=33 Identities=27% Similarity=0.491 Sum_probs=29.5
Q ss_pred cEEEECCChHHHHHHHHHHHCC--CeEEEEcCCCC
Q 006891 73 DILVIGGGATGCGVALDAATRG--LRVGLVEREDF 105 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G--~~V~lvEk~~~ 105 (627)
.|||||||.+|+++|..|.+.| .+|+|||+++.
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred EEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 5999999999999999998875 68999999863
No 275
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=95.94 E-value=0.08 Score=52.67 Aligned_cols=33 Identities=30% Similarity=0.501 Sum_probs=30.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
-.|+|||||.+|+-+|..|++.|.+|+|+++.+
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 479999999999999999999999999999753
No 276
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=95.88 E-value=0.0056 Score=64.64 Aligned_cols=62 Identities=13% Similarity=0.009 Sum_probs=45.3
Q ss_pred HHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCChHHHhhhhc
Q 006891 235 NVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLAD 304 (627)
Q Consensus 235 ~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s~~l~~~~g 304 (627)
...+.+..+++|+++++++.|+++.. + + +.+++ .+|+..++.+|.||.|+|.-...+....+
T Consensus 203 ~~~l~~~l~~~GV~~~~~~~v~~v~~---~-~---~~~~~-~~g~~~~i~~d~vi~~~G~~~~~~~~~~~ 264 (430)
T 3hyw_A 203 KRLVEDLFAERNIDWIANVAVKAIEP---D-K---VIYED-LNGNTHEVPAKFTMFMPSFQGPEVVASAG 264 (430)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEECS---S-E---EEEEC-TTSCEEEEECSEEEEECEEECCHHHHTTC
T ss_pred HHHHHHHHHhCCeEEEeCceEEEEeC---C-c---eEEEe-eCCCceEeecceEEEeccCCCchHHHhcc
Confidence 34455667889999999999998843 2 3 34444 45666789999999999977666655444
No 277
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.94 E-value=0.033 Score=48.50 Aligned_cols=34 Identities=15% Similarity=0.198 Sum_probs=31.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-.|+|||.|-.|..+|..|.+.|++|+++|++.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3579999999999999999999999999999973
No 278
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.91 E-value=0.03 Score=49.71 Aligned_cols=34 Identities=26% Similarity=0.385 Sum_probs=31.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-.|+|||+|..|..+|..|.+.|++|++++++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999999863
No 279
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.63 E-value=0.034 Score=48.36 Aligned_cols=32 Identities=28% Similarity=0.526 Sum_probs=30.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
-.|+|+|+|-.|..+|..|.++|++|+++|++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 36999999999999999999999999999986
No 280
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.48 E-value=0.039 Score=47.54 Aligned_cols=32 Identities=22% Similarity=0.434 Sum_probs=30.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
..|+|||+|..|...|..|.+.|.+|+++|++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 46999999999999999999999999999985
No 281
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=94.43 E-value=0.035 Score=55.56 Aligned_cols=32 Identities=38% Similarity=0.547 Sum_probs=30.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
-.|.|||+|..|..+|..++..|++|+|+|..
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~ 38 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECC
Confidence 46999999999999999999999999999975
No 282
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.38 E-value=0.041 Score=45.79 Aligned_cols=32 Identities=25% Similarity=0.369 Sum_probs=29.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCC-CeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRG-LRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G-~~V~lvEk~ 103 (627)
..|+|+|+|..|..++..|.++| ++|++++++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 46999999999999999999999 899999985
No 283
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.27 E-value=0.054 Score=47.85 Aligned_cols=32 Identities=19% Similarity=0.245 Sum_probs=30.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
-.|+|||+|-.|...|..|.+.|++|+++|++
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 46999999999999999999999999999986
No 284
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=93.85 E-value=0.043 Score=56.85 Aligned_cols=33 Identities=21% Similarity=0.269 Sum_probs=31.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
-.|+|||||.+|+-+|..|++.|.+|+|+|+.+
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~ 179 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILE 179 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC
Confidence 479999999999999999999999999999975
No 285
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=93.80 E-value=0.043 Score=54.78 Aligned_cols=33 Identities=27% Similarity=0.380 Sum_probs=31.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
-.|+|||||.+|+-+|..|++.|.+|+|||+.+
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 178 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRD 178 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeccc
Confidence 479999999999999999999999999999865
No 286
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=93.16 E-value=0.074 Score=45.95 Aligned_cols=31 Identities=26% Similarity=0.287 Sum_probs=29.6
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 73 DILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
.|+|+|+|..|..+|..|.+.|++|++++++
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5999999999999999999999999999986
No 287
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.11 E-value=0.07 Score=54.78 Aligned_cols=33 Identities=33% Similarity=0.523 Sum_probs=31.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
-.|+|||||.+|+-+|..|++.|.+|+|+|+.+
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 176 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA 176 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 479999999999999999999999999999875
No 288
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=93.02 E-value=0.05 Score=57.24 Aligned_cols=33 Identities=30% Similarity=0.495 Sum_probs=30.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
..|.|||+|..|.++|..+++.|++|+++|++.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 469999999999999999999999999999864
No 289
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=92.88 E-value=0.11 Score=51.55 Aligned_cols=32 Identities=44% Similarity=0.691 Sum_probs=29.9
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 73 DILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.|.|||+|..|.++|..|++.|++|+++|++.
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999999999999999999999999999853
No 290
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=92.84 E-value=0.095 Score=52.57 Aligned_cols=33 Identities=36% Similarity=0.523 Sum_probs=30.5
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
..|.|||+|..|.+.|..++++|++|+++|++.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999853
No 291
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.82 E-value=0.099 Score=51.51 Aligned_cols=33 Identities=24% Similarity=0.451 Sum_probs=30.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
-.|.|||+|..|..+|..+++.|++|+++|++.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 369999999999999999999999999998853
No 292
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.53 E-value=0.12 Score=47.04 Aligned_cols=33 Identities=24% Similarity=0.342 Sum_probs=30.6
Q ss_pred CcEEEECCChHHHHHHHHHHHC-CCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATR-GLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~-G~~V~lvEk~~ 104 (627)
-.|+|||+|..|..+|..|.+. |++|+++|++.
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 4799999999999999999999 99999999863
No 293
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=92.00 E-value=0.12 Score=48.71 Aligned_cols=32 Identities=22% Similarity=0.435 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 73 DILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.|+|||+|-.|..+|..|.++|++|+++|++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 49999999999999999999999999999863
No 294
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=91.56 E-value=0.18 Score=50.13 Aligned_cols=33 Identities=21% Similarity=0.315 Sum_probs=30.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
...|.|||.|..|...|..|++.|++|+++++.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 357999999999999999999999999999875
No 295
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=91.48 E-value=0.14 Score=48.21 Aligned_cols=33 Identities=21% Similarity=0.327 Sum_probs=30.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
.-.|+|||||-+|...|..|.+.|.+|+|++..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 357999999999999999999999999999863
No 296
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=91.45 E-value=0.17 Score=49.95 Aligned_cols=33 Identities=30% Similarity=0.512 Sum_probs=30.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-.|.|||+|..|...|..|+ .|++|+++|+..
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 457999999999999999999 999999999753
No 297
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=91.44 E-value=0.44 Score=52.33 Aligned_cols=40 Identities=28% Similarity=0.463 Sum_probs=36.2
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGT 109 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~g~ 109 (627)
.+|||+|||+|+.|+..|..|++.|.+|++|||++.-+|.
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~ 46 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGN 46 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCc
Confidence 3699999999999999999999999999999999865544
No 298
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=91.40 E-value=0.16 Score=51.70 Aligned_cols=33 Identities=27% Similarity=0.418 Sum_probs=29.7
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
-.|+|||+|.+|+-+|..|++.|.+|+|+++.+
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~ 199 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTT 199 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCC
Confidence 479999999999999999999999999999864
No 299
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=91.38 E-value=0.18 Score=50.51 Aligned_cols=32 Identities=44% Similarity=0.510 Sum_probs=29.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
..|+|||+|..|.+.|..|++.|.+|+++.+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 36999999999999999999999999999885
No 300
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=91.20 E-value=0.39 Score=51.17 Aligned_cols=39 Identities=36% Similarity=0.609 Sum_probs=34.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCCCCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSG 108 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~~~g 108 (627)
+++||+|||||++|+++|+.|+++|++|+|+|+++..+|
T Consensus 38 ~~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG 76 (495)
T 2vvm_A 38 GPWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGG 76 (495)
T ss_dssp CCEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBT
T ss_pred cCCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 458999999999999999999999999999999874443
No 301
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=91.20 E-value=0.2 Score=50.99 Aligned_cols=34 Identities=32% Similarity=0.421 Sum_probs=31.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
....|.|||+|..|.+.|..|++.|.+|.+++++
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSC
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 3457999999999999999999999999999875
No 302
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=91.18 E-value=0.2 Score=50.45 Aligned_cols=34 Identities=26% Similarity=0.300 Sum_probs=30.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~~ 104 (627)
...|+|||+|..|.++|..|+..|+ +|+|+|.+.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 3579999999999999999999998 999999863
No 303
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=91.13 E-value=0.18 Score=50.35 Aligned_cols=32 Identities=28% Similarity=0.341 Sum_probs=29.4
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
..|.|||+|..|.+.|..|++.|.+|+++.++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 36999999999999999999999999999884
No 304
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=90.79 E-value=0.25 Score=46.11 Aligned_cols=33 Identities=21% Similarity=0.403 Sum_probs=30.7
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
..|.|||+|..|.+.|..|++.|.+|.++++..
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~ 52 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKD 52 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 469999999999999999999999999999864
No 305
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=90.74 E-value=0.24 Score=49.56 Aligned_cols=32 Identities=38% Similarity=0.597 Sum_probs=30.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC--eEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~--~V~lvEk~ 103 (627)
..|+|||+|.+|...|..|++.|+ +|++++++
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 479999999999999999999999 99999985
No 306
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=90.67 E-value=0.11 Score=50.77 Aligned_cols=33 Identities=30% Similarity=0.483 Sum_probs=30.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
...|+|||||-+|...+..|.+.|.+|+|++..
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 357999999999999999999999999999874
No 307
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=90.64 E-value=0.2 Score=53.10 Aligned_cols=33 Identities=33% Similarity=0.473 Sum_probs=30.4
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
..|.|||+|..|..+|..|++.|++|+++|++.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 369999999999999999999999999999853
No 308
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=90.63 E-value=0.25 Score=48.52 Aligned_cols=32 Identities=28% Similarity=0.177 Sum_probs=29.8
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 73 DILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.|.|||+|..|...|..|++.|++|+++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 48999999999999999999999999999864
No 309
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=90.54 E-value=0.25 Score=49.87 Aligned_cols=31 Identities=26% Similarity=0.419 Sum_probs=29.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVER 102 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk 102 (627)
..|.|||+|..|.+.|..|++.|.+|+++++
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r 34 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLAR 34 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEEC
Confidence 3699999999999999999999999999987
No 310
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=90.41 E-value=0.25 Score=52.53 Aligned_cols=33 Identities=21% Similarity=0.322 Sum_probs=31.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
...|.|||.|.+|+..|..|++.|++|++++++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~ 40 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVD 40 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECC
Confidence 468999999999999999999999999999986
No 311
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=90.21 E-value=0.23 Score=47.89 Aligned_cols=34 Identities=24% Similarity=0.529 Sum_probs=31.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC-eEEEEcCCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGL-RVGLVEREDF 105 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~~~ 105 (627)
..|+|||+|-.|..+|..|++.|. +++|+|...+
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v 66 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTV 66 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCc
Confidence 579999999999999999999998 8999998754
No 312
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=90.19 E-value=0.28 Score=49.33 Aligned_cols=33 Identities=27% Similarity=0.403 Sum_probs=30.5
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC-eEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGL-RVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~~ 104 (627)
..|.|||+|..|.++|..|+..|+ +|+|+|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 479999999999999999999999 999999863
No 313
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=90.16 E-value=0.28 Score=51.82 Aligned_cols=33 Identities=24% Similarity=0.223 Sum_probs=31.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
-.|+|||.|.+|+++|..|.++|++|++.|+..
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 479999999999999999999999999999865
No 314
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=90.15 E-value=0.3 Score=48.86 Aligned_cols=33 Identities=24% Similarity=0.360 Sum_probs=30.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC--eEEEEcCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~--~V~lvEk~ 103 (627)
...|+|||+|.+|.++|+.|+..|+ .|+|+|.+
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVF 41 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4689999999999999999999998 89999975
No 315
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=90.01 E-value=0.23 Score=52.75 Aligned_cols=33 Identities=9% Similarity=0.129 Sum_probs=30.7
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
-.|+|||+|.+|+-+|..|++.|.+|+|+++.+
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~ 230 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRT 230 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECSS
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECC
Confidence 479999999999999999999999999999764
No 316
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=89.94 E-value=0.36 Score=48.17 Aligned_cols=33 Identities=36% Similarity=0.408 Sum_probs=30.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEcCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~ 103 (627)
.-.|.|||+|.+|.++|+.|+..|+ .|+|+|..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 4579999999999999999999999 99999986
No 317
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=89.92 E-value=0.29 Score=48.64 Aligned_cols=31 Identities=26% Similarity=0.415 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 73 DILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
.|.|||+|..|...|..|++.|++|++++++
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 6999999999999999999999999999874
No 318
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=89.90 E-value=0.28 Score=52.05 Aligned_cols=34 Identities=26% Similarity=0.373 Sum_probs=31.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-.|+|||||.+|+-+|..|++.|.+|+|+|+.+
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 209 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNT 209 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECC
Confidence 4589999999999999999999999999999875
No 319
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=89.87 E-value=0.31 Score=51.79 Aligned_cols=33 Identities=36% Similarity=0.506 Sum_probs=30.5
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
..|.|||+|..|.++|..|++.|++|+++|++.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 369999999999999999999999999999863
No 320
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=89.75 E-value=0.31 Score=48.43 Aligned_cols=31 Identities=32% Similarity=0.522 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHHHHCCC--eEEEEcCC
Q 006891 73 DILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G~--~V~lvEk~ 103 (627)
.|+|||+|.+|.+.|+.|+..|+ .|+|+|.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 48999999999999999999999 99999985
No 321
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=89.73 E-value=0.32 Score=50.06 Aligned_cols=34 Identities=24% Similarity=0.334 Sum_probs=31.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
...|+|||+|.+|+.+|..|...|.+|+++|+..
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3579999999999999999999999999999864
No 322
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=89.59 E-value=0.31 Score=48.83 Aligned_cols=33 Identities=30% Similarity=0.402 Sum_probs=30.4
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC-eEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGL-RVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~~ 104 (627)
..|.|||+|..|.++|..|++.|+ +|+|+|...
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 469999999999999999999998 999999863
No 323
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=89.57 E-value=0.34 Score=50.87 Aligned_cols=35 Identities=23% Similarity=0.268 Sum_probs=32.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
....+.|||.|..|+..|..|++.|++|++++++.
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~ 41 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDA 41 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35789999999999999999999999999999874
No 324
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=89.52 E-value=0.19 Score=52.88 Aligned_cols=33 Identities=21% Similarity=0.301 Sum_probs=30.9
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEcCCCC
Q 006891 73 DILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~~ 105 (627)
.|+|||.|.+|+++|+.|+++|++|++.|....
T Consensus 7 ~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 7 NVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp CEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred EEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 599999999999999999999999999998764
No 325
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=89.39 E-value=0.32 Score=51.26 Aligned_cols=33 Identities=33% Similarity=0.361 Sum_probs=30.5
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
..|.|||.|.+|+..|..|++.|++|++++++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 369999999999999999999999999999863
No 326
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=89.35 E-value=0.34 Score=50.43 Aligned_cols=33 Identities=12% Similarity=0.275 Sum_probs=31.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
-.|+|||.|-.|..+|..|.++|++|++||++.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 469999999999999999999999999999873
No 327
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=89.24 E-value=0.25 Score=52.06 Aligned_cols=33 Identities=12% Similarity=0.142 Sum_probs=30.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCe-EEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLR-VGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~-V~lvEk~~ 104 (627)
-+|+|||+|.+|+-+|..|++.|.+ |+|+++.+
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 4799999999999999999999999 99999854
No 328
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=89.15 E-value=0.23 Score=49.07 Aligned_cols=32 Identities=28% Similarity=0.452 Sum_probs=30.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
..|+|||+|..|.+.|..|++.|.+|+++++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESS
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEec
Confidence 36999999999999999999999999999986
No 329
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=89.11 E-value=0.28 Score=48.77 Aligned_cols=33 Identities=36% Similarity=0.483 Sum_probs=31.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
-.|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 178 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRD 178 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC
Confidence 579999999999999999999999999999875
No 330
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=89.11 E-value=0.45 Score=47.27 Aligned_cols=33 Identities=36% Similarity=0.452 Sum_probs=30.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
...|.|||.|..|...|..|++.|++|+++++.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~ 41 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRS 41 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357999999999999999999999999999875
No 331
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=89.06 E-value=0.31 Score=49.64 Aligned_cols=35 Identities=26% Similarity=0.517 Sum_probs=31.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC-eEEEEcCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGL-RVGLVERED 104 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~~ 104 (627)
.+..|||+|+|.+|..+|..|...|. +|.++|+..
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 35689999999999999999999999 999999964
No 332
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=88.99 E-value=0.29 Score=52.30 Aligned_cols=34 Identities=35% Similarity=0.529 Sum_probs=31.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-.|+|||||.+|+-+|..|++.|.+|+|+|+.+
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 231 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLD 231 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccc
Confidence 3579999999999999999999999999999875
No 333
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=88.95 E-value=0.38 Score=50.89 Aligned_cols=33 Identities=27% Similarity=0.210 Sum_probs=31.1
Q ss_pred CcEEEECCChHHHHHHHHHHHC-CC-eEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATR-GL-RVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~-G~-~V~lvEk~~ 104 (627)
..|.|||+|..|+..|..|++. |+ +|+++|++.
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~ 53 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNS 53 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCC
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 4799999999999999999999 99 999999874
No 334
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=88.91 E-value=0.36 Score=50.25 Aligned_cols=34 Identities=32% Similarity=0.404 Sum_probs=31.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-.|+|||+|..|+-+|..|++.|.+|+++|+.+
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~ 185 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALP 185 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCC
Confidence 4579999999999999999999999999999975
No 335
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=88.90 E-value=0.27 Score=53.27 Aligned_cols=33 Identities=27% Similarity=0.255 Sum_probs=31.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
-.|+|||+|.+|+-+|..|++.|.+|+|+++.+
T Consensus 179 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~ 211 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTP 211 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTCSEEEEEESSC
T ss_pred ceEEEECCCchHHHHHHHHHhhCCEEEEEECCC
Confidence 479999999999999999999999999999975
No 336
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=88.82 E-value=0.42 Score=47.92 Aligned_cols=32 Identities=25% Similarity=0.324 Sum_probs=29.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC-eEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~ 103 (627)
..|.|||+|.+|.++|..|+..|+ +|+|+|.+
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~ 37 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIV 37 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 469999999999999999999998 99999975
No 337
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=88.74 E-value=0.41 Score=48.58 Aligned_cols=32 Identities=25% Similarity=0.205 Sum_probs=29.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
..|.|||+|..|...|..|++.|++|+++++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 47999999999999999999999999999874
No 338
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=88.70 E-value=0.41 Score=47.65 Aligned_cols=31 Identities=35% Similarity=0.393 Sum_probs=28.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
..|+|||+|..|...|..|+ .|.+|+++.+.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECC
Confidence 36999999999999999999 99999999875
No 339
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=88.70 E-value=0.43 Score=48.12 Aligned_cols=34 Identities=26% Similarity=0.284 Sum_probs=30.7
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
.+..|.|||+|..|.+.|..|++.|.+|.++++.
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 3568999999999999999999999999999874
No 340
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=88.68 E-value=0.39 Score=50.92 Aligned_cols=34 Identities=29% Similarity=0.483 Sum_probs=31.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-.|+|||||.+|+-+|..|++.|.+|+|+++.+
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 205 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLD 205 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC
Confidence 3579999999999999999999999999999865
No 341
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=88.60 E-value=0.5 Score=47.07 Aligned_cols=33 Identities=18% Similarity=0.393 Sum_probs=30.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
..|.|||.|..|...|..|++.|++|+++++..
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999999864
No 342
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=88.56 E-value=0.44 Score=46.47 Aligned_cols=33 Identities=33% Similarity=0.471 Sum_probs=30.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
...++|+|+|.+|.++|+.|++.|.+|+++.+.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 346999999999999999999999999999874
No 343
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=88.55 E-value=0.5 Score=47.73 Aligned_cols=32 Identities=19% Similarity=0.153 Sum_probs=29.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
-.|.|||.|..|.+.|..|.+.|++|.+++++
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~ 40 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRS 40 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46999999999999999999999999999875
No 344
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=88.46 E-value=0.42 Score=49.89 Aligned_cols=34 Identities=26% Similarity=0.192 Sum_probs=31.3
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
....|.|||.|.+|+.+|..+++.|++|+.+|-+
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did 53 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVN 53 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSC
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECC
Confidence 3468999999999999999999999999999976
No 345
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=88.45 E-value=0.42 Score=47.83 Aligned_cols=31 Identities=29% Similarity=0.477 Sum_probs=28.7
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
..|.|||+|..|.+.|..|++.|.+|+++ +.
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 46999999999999999999999999999 53
No 346
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=88.39 E-value=0.35 Score=49.34 Aligned_cols=34 Identities=24% Similarity=0.298 Sum_probs=31.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
...|+|||+|.+|..+|..|...|.+|+++|+..
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999863
No 347
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=88.31 E-value=0.48 Score=45.35 Aligned_cols=33 Identities=30% Similarity=0.397 Sum_probs=30.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
...|.|||.|..|.+.|..|++.|++|++.++.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 467999999999999999999999999999875
No 348
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=88.08 E-value=0.31 Score=48.53 Aligned_cols=31 Identities=35% Similarity=0.454 Sum_probs=28.9
Q ss_pred CcEEEECCChHHHHHHHHHHHC-----C-CeEEEEcC
Q 006891 72 LDILVIGGGATGCGVALDAATR-----G-LRVGLVER 102 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~-----G-~~V~lvEk 102 (627)
..|.|||+|..|...|..|++. | .+|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 4799999999999999999999 9 99999976
No 349
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=88.07 E-value=0.19 Score=43.78 Aligned_cols=33 Identities=21% Similarity=0.277 Sum_probs=30.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
.-.|+|||+|..|..+|..|.+.|.+|+++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 357999999999999999999999999999875
No 350
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=88.06 E-value=0.22 Score=52.75 Aligned_cols=33 Identities=18% Similarity=0.489 Sum_probs=30.7
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
..|+|+|+|-+|..+|..|...|++|+|||++.
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 369999999999999999999999999999973
No 351
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=88.05 E-value=0.4 Score=50.32 Aligned_cols=31 Identities=29% Similarity=0.217 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 73 DILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
.|.|||+|.+|+..|..|++.|++|++++++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 4899999999999999999999999999885
No 352
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=88.02 E-value=0.52 Score=44.12 Aligned_cols=32 Identities=19% Similarity=0.298 Sum_probs=29.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
..|.|||+|..|...|..|++.|++|.+++++
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46999999999999999999999999999875
No 353
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=87.99 E-value=0.31 Score=52.85 Aligned_cols=33 Identities=30% Similarity=0.316 Sum_probs=31.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
-.|+|||+|.+|+-+|..|++.+.+|+|+++.+
T Consensus 186 krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~ 218 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAETAKELYVFQRTP 218 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTBSEEEEEESSC
T ss_pred CeEEEECCCccHHHHHHHHHhhCCEEEEEEcCC
Confidence 479999999999999999999999999999975
No 354
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=87.93 E-value=0.49 Score=46.48 Aligned_cols=32 Identities=25% Similarity=0.322 Sum_probs=29.9
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 73 DILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.|.|||.|..|...|..|++.|++|+++++..
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 59999999999999999999999999999863
No 355
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=87.91 E-value=0.42 Score=48.65 Aligned_cols=34 Identities=26% Similarity=0.374 Sum_probs=31.5
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC-eEEEEcCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~ 103 (627)
.+..|||+|+|.+|..+|..|...|. +|+++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 45789999999999999999999998 79999986
No 356
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=87.91 E-value=0.33 Score=52.70 Aligned_cols=33 Identities=21% Similarity=0.224 Sum_probs=31.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
-.|+|||+|.+|+-+|..|++.|.+|+|+++.+
T Consensus 192 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~ 224 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSA 224 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CEEEEECCCchHHHHHHHHHhhCCEEEEEECCC
Confidence 479999999999999999999999999999975
No 357
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=87.88 E-value=0.4 Score=53.66 Aligned_cols=33 Identities=33% Similarity=0.473 Sum_probs=30.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
-.|.|||+|..|..+|+.++..|++|+|+|...
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 479999999999999999999999999999753
No 358
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=87.81 E-value=0.47 Score=49.48 Aligned_cols=32 Identities=19% Similarity=0.154 Sum_probs=29.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
...|.|||.|.+|+..|..|++ |++|+++|++
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~ 67 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIV 67 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSC
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecC
Confidence 3579999999999999999998 9999999986
No 359
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=87.56 E-value=0.56 Score=46.67 Aligned_cols=32 Identities=28% Similarity=0.325 Sum_probs=29.5
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC-eEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~ 103 (627)
..|.|||+|.+|..+|..|+..|+ +|+|+|.+
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~ 35 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIV 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Confidence 369999999999999999999997 99999975
No 360
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=87.40 E-value=0.5 Score=50.86 Aligned_cols=33 Identities=21% Similarity=0.322 Sum_probs=31.4
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
-.|+|||||.+|+-+|..|++.|.+|+|+|+.+
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~ 247 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTE 247 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecC
Confidence 689999999999999999999999999999975
No 361
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=87.39 E-value=0.24 Score=52.02 Aligned_cols=35 Identities=17% Similarity=0.189 Sum_probs=25.4
Q ss_pred CCCCcEEEECCChHHH-HHHHHHHHC-CCeE-EEEcCC
Q 006891 69 SNPLDILVIGGGATGC-GVALDAATR-GLRV-GLVERE 103 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~-~~A~~La~~-G~~V-~lvEk~ 103 (627)
+....|.|||.|..|. ..+..+.+. +.++ .|+++.
T Consensus 81 ~~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~ 118 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGN 118 (433)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSC
T ss_pred CCceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCC
Confidence 4457899999999996 677777664 5564 566654
No 362
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=87.36 E-value=0.5 Score=47.45 Aligned_cols=33 Identities=30% Similarity=0.293 Sum_probs=30.0
Q ss_pred CcEEEECCChHHHH-HHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCG-VALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~-~A~~La~~G~~V~lvEk~~ 104 (627)
-.|.|||.|.+|++ +|..|.++|++|.+.|+.+
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 36999999999996 8999999999999999865
No 363
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=87.29 E-value=0.44 Score=53.44 Aligned_cols=32 Identities=31% Similarity=0.492 Sum_probs=30.1
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 73 DILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.|.|||+|..|..+|..+++.|++|+++|++.
T Consensus 314 kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred EEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 59999999999999999999999999999863
No 364
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=87.25 E-value=0.53 Score=48.03 Aligned_cols=32 Identities=25% Similarity=0.440 Sum_probs=29.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
-.|+|+|+|.+|..++..|...|.+|+++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~ 199 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDIN 199 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 47999999999999999999999999999874
No 365
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=87.21 E-value=0.6 Score=46.50 Aligned_cols=32 Identities=28% Similarity=0.443 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHHHHC--CCeEEEEcCCC
Q 006891 73 DILVIGGGATGCGVALDAATR--GLRVGLVERED 104 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~--G~~V~lvEk~~ 104 (627)
.|.|||+|.+|.+.|..|++. |.+|+++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 489999999999999999995 78999999863
No 366
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=87.21 E-value=0.65 Score=46.57 Aligned_cols=36 Identities=25% Similarity=0.548 Sum_probs=32.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEcCCCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVEREDFS 106 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~~~~ 106 (627)
...|+|||+|-.|+.+|..|+..|. +++|+|...+.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve 70 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 70 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEec
Confidence 4689999999999999999999998 79999987643
No 367
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=87.18 E-value=0.43 Score=47.96 Aligned_cols=30 Identities=20% Similarity=0.386 Sum_probs=28.5
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEcC
Q 006891 73 DILVIGGGATGCGVALDAATRGLRVGLVER 102 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G~~V~lvEk 102 (627)
.|.|||+|..|...|..|++.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 489999999999999999999999999987
No 368
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=87.12 E-value=0.47 Score=47.49 Aligned_cols=31 Identities=23% Similarity=0.465 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHHHHCCC--eEEEEcCC
Q 006891 73 DILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G~--~V~lvEk~ 103 (627)
.|.|||+|.+|.+.|..|++.|+ +|+++|+.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVD 34 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 48999999999999999999999 99999985
No 369
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=87.05 E-value=0.71 Score=46.22 Aligned_cols=34 Identities=29% Similarity=0.332 Sum_probs=30.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~~ 104 (627)
...|.|||+|.+|.++|+.|+..|+ .|+|+|...
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 3579999999999999999999999 999999854
No 370
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=87.02 E-value=0.62 Score=46.58 Aligned_cols=32 Identities=22% Similarity=0.331 Sum_probs=30.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
..|.|||.|..|...|..|++.|++|+++++.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCC
Confidence 47999999999999999999999999999885
No 371
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=86.95 E-value=0.48 Score=46.60 Aligned_cols=35 Identities=17% Similarity=0.336 Sum_probs=31.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEcCCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVEREDF 105 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~~~ 105 (627)
...|+|||+|-.|+.+|..|++.|. +++|+|...+
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~V 71 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKV 71 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 4689999999999999999999997 8999998754
No 372
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=86.95 E-value=0.96 Score=43.46 Aligned_cols=35 Identities=31% Similarity=0.465 Sum_probs=31.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEcCCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVEREDF 105 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~~~ 105 (627)
...|+|||+|-.|..+|..|++.|. +++|+|...+
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v 63 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDV 63 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 3689999999999999999999998 7899998754
No 373
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=86.88 E-value=0.57 Score=47.96 Aligned_cols=32 Identities=25% Similarity=0.495 Sum_probs=29.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
-.|+|+|+|.+|..+|..|...|.+|+++++.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~ 198 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVN 198 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 46999999999999999999999999999875
No 374
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=86.79 E-value=0.58 Score=43.47 Aligned_cols=31 Identities=32% Similarity=0.487 Sum_probs=28.7
Q ss_pred cEEEEC-CChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 73 DILVIG-GGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 73 DVvIIG-gGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
.|+||| +|..|...|..|++.|++|.+++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 489999 9999999999999999999999874
No 375
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=86.78 E-value=0.6 Score=48.34 Aligned_cols=33 Identities=24% Similarity=0.356 Sum_probs=30.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
..|+|||+|.+|+.+|..|...|.+|+++|+..
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 479999999999999999999999999998753
No 376
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=86.71 E-value=0.62 Score=46.67 Aligned_cols=33 Identities=18% Similarity=0.402 Sum_probs=30.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC--eEEEEcCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~--~V~lvEk~ 103 (627)
...|.|||+|.+|.++|+.|+..|+ .|+|+|..
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 3579999999999999999999998 89999974
No 377
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=86.56 E-value=0.6 Score=46.03 Aligned_cols=32 Identities=19% Similarity=0.310 Sum_probs=29.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
..|.|||+|..|...|..|++.|++|.++++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 46999999999999999999999999999874
No 378
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=86.52 E-value=0.51 Score=46.63 Aligned_cols=33 Identities=21% Similarity=0.130 Sum_probs=30.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
..|.|||.|..|...|..|++.|++|++++++.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSST
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999999864
No 379
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=86.52 E-value=0.71 Score=44.81 Aligned_cols=33 Identities=24% Similarity=0.518 Sum_probs=30.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
...++|||+|-+|.++|+.|++.|.+|+|+.|.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt 150 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRS 150 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357999999999999999999999999999886
No 380
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=86.52 E-value=0.6 Score=46.19 Aligned_cols=32 Identities=22% Similarity=0.290 Sum_probs=29.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
..|.|||.|..|...|..|++.|++|+++++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCC
Confidence 36999999999999999999999999999875
No 381
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=86.23 E-value=0.86 Score=45.43 Aligned_cols=32 Identities=19% Similarity=0.321 Sum_probs=29.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC--eEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~--~V~lvEk~ 103 (627)
..|.|||.|..|.+.|..|.+.|+ +|+++++.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~ 67 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 67 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 579999999999999999999999 99999875
No 382
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=86.18 E-value=0.71 Score=44.98 Aligned_cols=31 Identities=35% Similarity=0.368 Sum_probs=28.7
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 73 DILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
.|.|||+|..|.+.|..|++.|++|++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 4899999999999999999999999999874
No 383
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=86.15 E-value=0.66 Score=49.35 Aligned_cols=33 Identities=24% Similarity=0.169 Sum_probs=30.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
-.++|||||.+|+-+|..|++.|.+|+|+++..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 220 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSI 220 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 479999999999999999999999999998853
No 384
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=86.13 E-value=0.51 Score=46.35 Aligned_cols=32 Identities=22% Similarity=0.282 Sum_probs=29.9
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 73 DILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.|.|||.|..|...|..|++.|++|++++++.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 59999999999999999999999999998864
No 385
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=86.07 E-value=0.51 Score=52.81 Aligned_cols=33 Identities=24% Similarity=0.493 Sum_probs=30.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
..|.|||+|..|..+|..+++.|++|+++|++.
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999863
No 386
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=86.07 E-value=0.32 Score=46.11 Aligned_cols=31 Identities=16% Similarity=0.254 Sum_probs=29.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVER 102 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk 102 (627)
..|.|||.|..|.+.|..|.++|++|+++++
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHTTCEEEECSS
T ss_pred cEEEEEeeCHHHHHHHHHHHHCCCEEEEecC
Confidence 4799999999999999999999999999987
No 387
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=86.00 E-value=0.63 Score=46.13 Aligned_cols=33 Identities=30% Similarity=0.616 Sum_probs=30.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC--eEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGL--RVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~--~V~lvEk~~ 104 (627)
..|.|||+|.+|..+|+.++.+|+ .|+|+|...
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 579999999999999999999999 999999864
No 388
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=85.98 E-value=0.76 Score=46.73 Aligned_cols=32 Identities=19% Similarity=0.253 Sum_probs=30.4
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
..|.|||.|..|...|..|++.|++|+++++.
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 57999999999999999999999999999885
No 389
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=85.94 E-value=0.91 Score=45.35 Aligned_cols=34 Identities=26% Similarity=0.306 Sum_probs=30.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~~ 104 (627)
...|.|||+|.+|.++|+.|+..|+ +|+|+|...
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 3579999999999999999999998 999999864
No 390
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=85.86 E-value=0.81 Score=48.78 Aligned_cols=35 Identities=29% Similarity=0.358 Sum_probs=32.0
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
....|.|||.|..|...|..|+++|++|+++++..
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45789999999999999999999999999999863
No 391
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=85.86 E-value=0.67 Score=49.22 Aligned_cols=35 Identities=29% Similarity=0.448 Sum_probs=31.0
Q ss_pred CCCCcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 69 ~~~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
+.+.+|.|||.|..|.+.|..|++.|++|+++++.
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~ 47 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRS 47 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 34568999999999999999999999999999885
No 392
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=85.80 E-value=0.41 Score=48.88 Aligned_cols=31 Identities=23% Similarity=0.319 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 73 DILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
.|.|||+|..|.+.|..|++.|++|+++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 6999999999999999999999999999874
No 393
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=85.78 E-value=0.73 Score=48.52 Aligned_cols=32 Identities=31% Similarity=0.328 Sum_probs=29.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
--|+|+|+|.+|.++|..|+..|.+|+++|+.
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~ 297 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEID 297 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 45899999999999999999999999999874
No 394
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=85.74 E-value=0.61 Score=46.42 Aligned_cols=31 Identities=26% Similarity=0.361 Sum_probs=28.8
Q ss_pred cEEEECCChHHHHHHHHHHHCC--CeEEEEcCC
Q 006891 73 DILVIGGGATGCGVALDAATRG--LRVGLVERE 103 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G--~~V~lvEk~ 103 (627)
.|.|||+|.+|.+.|..|+++| .+|+++|++
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~ 35 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDAN 35 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCC
Confidence 5999999999999999999999 689999985
No 395
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=85.61 E-value=0.96 Score=44.99 Aligned_cols=32 Identities=25% Similarity=0.335 Sum_probs=29.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
..|.|||+|..|...|..|++.|++|+++++.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCC
Confidence 56999999999999999999999999999875
No 396
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=85.54 E-value=0.73 Score=45.55 Aligned_cols=33 Identities=27% Similarity=0.479 Sum_probs=30.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEcCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~ 103 (627)
...|+|||+|.+|.++|+.|++.|. +|+|+.+.
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 3469999999999999999999998 89999875
No 397
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=85.54 E-value=0.79 Score=47.16 Aligned_cols=34 Identities=26% Similarity=0.324 Sum_probs=30.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
...|+|||+|.+|+.++..|...|.+|+++|+..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999998753
No 398
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=85.46 E-value=0.71 Score=45.63 Aligned_cols=32 Identities=28% Similarity=0.478 Sum_probs=29.7
Q ss_pred cEEEEC-CChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 73 DILVIG-GGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 73 DVvIIG-gGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.|.||| .|..|.+.|..|++.|++|.+++++.
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 599999 99999999999999999999998753
No 399
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=85.41 E-value=0.58 Score=45.62 Aligned_cols=32 Identities=25% Similarity=0.406 Sum_probs=29.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
..++|+|+|.+|.++|+.|++.|.+|+|+.|.
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~ 151 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRT 151 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 46999999999999999999999999999885
No 400
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=85.38 E-value=0.77 Score=46.70 Aligned_cols=32 Identities=28% Similarity=0.493 Sum_probs=29.8
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 73 DILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
-|+|||||..|..+|+.+.+.|++|+++|.+.
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~ 34 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNP 34 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 49999999999999999999999999999864
No 401
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=85.35 E-value=0.67 Score=46.05 Aligned_cols=33 Identities=24% Similarity=0.160 Sum_probs=30.0
Q ss_pred CCcEEEECCC-hHHHHHHHHHHHCCCeEEEEcCC
Q 006891 71 PLDILVIGGG-ATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 71 ~~DVvIIGgG-i~G~~~A~~La~~G~~V~lvEk~ 103 (627)
...|+|||+| ++|..+|..|...|.+|+++++.
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 4689999999 67999999999999999999875
No 402
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=85.33 E-value=0.76 Score=47.15 Aligned_cols=32 Identities=31% Similarity=0.473 Sum_probs=29.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
..|+|||+|.+|..+|..|...|.+|+++++.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDIN 200 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 56999999999999999999999999999875
No 403
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=85.28 E-value=0.58 Score=48.52 Aligned_cols=30 Identities=23% Similarity=0.267 Sum_probs=28.2
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 73 DILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
.|.|||.|.+|+..|..|++ |++|++++++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECC
Confidence 48999999999999999999 9999999885
No 404
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=85.19 E-value=0.89 Score=42.15 Aligned_cols=31 Identities=32% Similarity=0.523 Sum_probs=28.7
Q ss_pred cEEEECC-ChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 73 DILVIGG-GATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 73 DVvIIGg-Gi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
.|+|+|| |..|..++..|+++|++|+++.+.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcC
Confidence 3899996 999999999999999999999885
No 405
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=85.11 E-value=0.53 Score=44.22 Aligned_cols=32 Identities=22% Similarity=0.285 Sum_probs=29.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEE-EcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGL-VERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~l-vEk~ 103 (627)
..|.|||+|..|.+.|..|++.|++|++ ++++
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~ 56 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRG 56 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence 4699999999999999999999999998 7664
No 406
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=85.03 E-value=0.75 Score=47.94 Aligned_cols=33 Identities=24% Similarity=0.262 Sum_probs=30.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
...-|||.|.+|+..|..|++.|++|+++|++.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 468999999999999999999999999999873
No 407
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=85.01 E-value=0.87 Score=42.40 Aligned_cols=30 Identities=37% Similarity=0.586 Sum_probs=28.4
Q ss_pred EEEECC-ChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 74 ILVIGG-GATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 74 VvIIGg-Gi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
|+|+|| |..|..++..|+++|++|+++.+.
T Consensus 3 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 899998 999999999999999999999875
No 408
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=85.01 E-value=0.81 Score=48.66 Aligned_cols=34 Identities=32% Similarity=0.539 Sum_probs=31.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-.|+|||+|.+|+-.|..+++.|.+|+++++.+
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~ 224 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGD 224 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCC
Confidence 3589999999999999999999999999999875
No 409
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=84.95 E-value=0.73 Score=48.63 Aligned_cols=32 Identities=25% Similarity=0.284 Sum_probs=30.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
-.|+|||||-+|...+..|.+.|.+|+|++..
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 46999999999999999999999999999975
No 410
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=84.93 E-value=0.73 Score=44.41 Aligned_cols=31 Identities=26% Similarity=0.524 Sum_probs=28.6
Q ss_pred cEEEECCChHHHHHHHHHHHCC-CeEEEEcCC
Q 006891 73 DILVIGGGATGCGVALDAATRG-LRVGLVERE 103 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G-~~V~lvEk~ 103 (627)
.|.|||+|..|...|..|++.| .+|.++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~ 33 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRG 33 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCC
Confidence 4899999999999999999999 999999874
No 411
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=84.92 E-value=0.72 Score=46.07 Aligned_cols=33 Identities=21% Similarity=0.175 Sum_probs=30.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCC-CeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRG-LRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G-~~V~lvEk~~ 104 (627)
..|.|||.|..|.+.|..|++.| ++|+++++..
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 46999999999999999999999 9999999863
No 412
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=84.82 E-value=0.96 Score=42.66 Aligned_cols=33 Identities=18% Similarity=0.338 Sum_probs=30.2
Q ss_pred CcEEEECC-ChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGG-GATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGg-Gi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-|+|.|| |..|..++..|+++|++|+++.+..
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 46999998 9999999999999999999998853
No 413
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=84.63 E-value=0.58 Score=45.63 Aligned_cols=33 Identities=18% Similarity=0.048 Sum_probs=30.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.-.|+|||+|.+|+-+|..|++.| +|+++++.+
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~ 173 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGI 173 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTT
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCC
Confidence 458999999999999999999999 999998754
No 414
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=84.57 E-value=0.66 Score=45.62 Aligned_cols=31 Identities=23% Similarity=0.443 Sum_probs=28.4
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
-.++|+|+|.+|.++|+.|++.| +|+++.+.
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 46999999999999999999999 99999774
No 415
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=84.50 E-value=0.94 Score=44.18 Aligned_cols=31 Identities=19% Similarity=0.349 Sum_probs=28.5
Q ss_pred cEEEECCChHHHHHHHHHHHCCC--eEEEEcCC
Q 006891 73 DILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G~--~V~lvEk~ 103 (627)
.|.|||+|..|.+.|..|++.|+ +|+++++.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 35 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 48999999999999999999998 89998864
No 416
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=84.41 E-value=0.78 Score=45.69 Aligned_cols=32 Identities=16% Similarity=0.248 Sum_probs=30.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC-eEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~ 103 (627)
..|.|||.|..|...|..|++.|+ +|+++++.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 479999999999999999999999 99999985
No 417
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=84.40 E-value=0.92 Score=44.43 Aligned_cols=32 Identities=13% Similarity=0.307 Sum_probs=29.5
Q ss_pred CcEEEECC-ChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGG-GATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGg-Gi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
..|.|||+ |..|.+.|..|++.|++|+++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 36999999 999999999999999999999874
No 418
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=84.27 E-value=0.8 Score=45.12 Aligned_cols=31 Identities=19% Similarity=0.279 Sum_probs=28.8
Q ss_pred cEEEECCChHHHHHHHHHHHCCC--eEEEEcCC
Q 006891 73 DILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G~--~V~lvEk~ 103 (627)
.|.|||+|..|.++|+.|+..|+ +|+|+|..
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~ 34 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIA 34 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 48999999999999999999998 89999985
No 419
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=84.22 E-value=1.1 Score=47.54 Aligned_cols=33 Identities=27% Similarity=0.357 Sum_probs=30.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.+|.|||.|..|...|..|++.|++|+++++..
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999864
No 420
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=84.21 E-value=0.79 Score=45.87 Aligned_cols=32 Identities=31% Similarity=0.400 Sum_probs=29.7
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC--eEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~--~V~lvEk~ 103 (627)
..|.|||+|.+|.++|+.++..|+ .|+|+|..
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKDLADEVALVDVM 55 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 579999999999999999999998 89999974
No 421
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=84.14 E-value=1 Score=44.05 Aligned_cols=33 Identities=21% Similarity=0.453 Sum_probs=29.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEcCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~ 103 (627)
...++|+|+|-+|.++++.|++.|. +|+|+.|.
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 4579999999999999999999999 69999775
No 422
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=84.10 E-value=0.98 Score=44.93 Aligned_cols=33 Identities=18% Similarity=0.484 Sum_probs=29.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEcCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~ 103 (627)
...++|+|+|-+|.++|+.|++.|. +|+|+.|.
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 3579999999999999999999998 89999875
No 423
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=84.09 E-value=0.99 Score=43.39 Aligned_cols=31 Identities=23% Similarity=0.435 Sum_probs=29.5
Q ss_pred cEEEECCChHHHHHHHHHHHCCC-eEEEEcCC
Q 006891 73 DILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~ 103 (627)
.++|||+|.+|.++++.|.+.|. +|.|+.|.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~ 141 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRT 141 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 79999999999999999999998 89999886
No 424
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=83.84 E-value=0.86 Score=44.43 Aligned_cols=32 Identities=31% Similarity=0.428 Sum_probs=29.8
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
..|+|||+|.+|.++|..|.+.|.+|+++++.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECC
Confidence 46999999999999999999999999999885
No 425
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=83.84 E-value=1 Score=45.74 Aligned_cols=32 Identities=19% Similarity=0.236 Sum_probs=29.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVER 102 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk 102 (627)
...|+|+|.|.+|..+|..|.+.|.+|++.|.
T Consensus 173 GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~ 204 (364)
T 1leh_A 173 GLAVSVQGLGNVAKALCKKLNTEGAKLVVTDV 204 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred cCEEEEECchHHHHHHHHHHHHCCCEEEEEcC
Confidence 35699999999999999999999999998874
No 426
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=83.82 E-value=0.97 Score=47.97 Aligned_cols=31 Identities=35% Similarity=0.677 Sum_probs=29.4
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 73 DILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
+|.|||.|..|...|..|++.|++|+++++.
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~ 33 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRT 33 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 6999999999999999999999999999885
No 427
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=83.80 E-value=0.81 Score=44.67 Aligned_cols=33 Identities=21% Similarity=0.282 Sum_probs=30.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC-eEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGL-RVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~~ 104 (627)
..++|||+|.+|.++|+.|++.|. +|+|+.|..
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 479999999999999999999999 899998863
No 428
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=83.79 E-value=1.3 Score=43.38 Aligned_cols=33 Identities=24% Similarity=0.451 Sum_probs=30.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC---eEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGL---RVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~---~V~lvEk~~ 104 (627)
..|.|||+|..|.+.|..|++.|+ +|.+++++.
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 469999999999999999999999 899998853
No 429
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=83.76 E-value=1.2 Score=44.53 Aligned_cols=33 Identities=30% Similarity=0.435 Sum_probs=30.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC--eEEEEcCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~--~V~lvEk~ 103 (627)
...|.|||+|.+|.++|+.|+.+|+ .++|+|..
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 3579999999999999999999998 89999974
No 430
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=83.73 E-value=0.43 Score=45.24 Aligned_cols=32 Identities=13% Similarity=0.142 Sum_probs=29.6
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
-.|+|||+|-.|..+|..|.+.|+ |+++|++.
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 479999999999999999999999 99999864
No 431
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=83.71 E-value=1.1 Score=47.41 Aligned_cols=33 Identities=27% Similarity=0.460 Sum_probs=30.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
..+|.|||.|..|...|..|++.|++|+++++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~ 37 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRT 37 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 357999999999999999999999999999875
No 432
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=83.66 E-value=0.98 Score=44.36 Aligned_cols=31 Identities=19% Similarity=0.191 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 73 DILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
.|.|||.|..|...|..|++.|++|.+++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~ 32 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVF 32 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4899999999999999999999999999875
No 433
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=83.63 E-value=1 Score=47.84 Aligned_cols=32 Identities=28% Similarity=0.398 Sum_probs=30.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
.+|.|||.|..|...|..|++.|++|+++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~ 34 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRT 34 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 36999999999999999999999999999885
No 434
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=83.58 E-value=1.1 Score=44.74 Aligned_cols=32 Identities=22% Similarity=0.524 Sum_probs=29.0
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC--eEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~--~V~lvEk~ 103 (627)
..|.|||+|.+|.+.|+.|+..|+ .|+++|.+
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 579999999999999999998886 79999875
No 435
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=83.57 E-value=0.82 Score=44.49 Aligned_cols=32 Identities=25% Similarity=0.244 Sum_probs=29.7
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
..|+|+|+|..|..++..|.++|++|+++.+.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESC
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcC
Confidence 46999999999999999999999999999875
No 436
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=83.56 E-value=0.76 Score=46.09 Aligned_cols=32 Identities=19% Similarity=0.526 Sum_probs=29.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
-.|+|||+|.+|+-+|..|++.| +|+++.+..
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 57999999999999999999998 799998863
No 437
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=83.54 E-value=1.1 Score=48.31 Aligned_cols=36 Identities=25% Similarity=0.548 Sum_probs=32.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEcCCCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVEREDFS 106 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~~~~ 106 (627)
...|+|||+|-.|+.+|..|++.|. +++|+|.+.+.
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve 362 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 362 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCc
Confidence 4679999999999999999999998 79999987653
No 438
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=83.43 E-value=0.95 Score=45.05 Aligned_cols=32 Identities=34% Similarity=0.496 Sum_probs=29.2
Q ss_pred cEEEECCChHHHHHHHHHHHCCC--eEEEEcCCC
Q 006891 73 DILVIGGGATGCGVALDAATRGL--RVGLVERED 104 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G~--~V~lvEk~~ 104 (627)
.|.|||+|.+|.++|+.|+..|+ .|+|+|...
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 48999999999999999999998 899999864
No 439
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=83.39 E-value=1.3 Score=43.21 Aligned_cols=32 Identities=28% Similarity=0.394 Sum_probs=30.1
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 73 DILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
.|+|.|+|..|..++..|.++|++|+++.+..
T Consensus 5 ~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 5 KILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 59999999999999999999999999998864
No 440
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=83.31 E-value=1.2 Score=40.76 Aligned_cols=32 Identities=28% Similarity=0.487 Sum_probs=29.8
Q ss_pred cEEEECC-ChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 73 DILVIGG-GATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 73 DVvIIGg-Gi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
-|+|+|| |..|..++..|.++|++|+++.+..
T Consensus 5 ~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 5 KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 5999999 9999999999999999999999864
No 441
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=83.28 E-value=1 Score=43.39 Aligned_cols=33 Identities=15% Similarity=0.162 Sum_probs=29.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCC----CeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRG----LRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G----~~V~lvEk~~ 104 (627)
..|.|||+|..|.+.|..|++.| .+|.++++..
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSK 41 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCc
Confidence 46999999999999999999999 6999998864
No 442
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=83.23 E-value=1.1 Score=44.00 Aligned_cols=34 Identities=12% Similarity=0.033 Sum_probs=30.1
Q ss_pred CCCcEEEECCC-hHHHHHHHHHHHCCCeEEEEcCC
Q 006891 70 NPLDILVIGGG-ATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 70 ~~~DVvIIGgG-i~G~~~A~~La~~G~~V~lvEk~ 103 (627)
....|+|||+| ++|..+|..|...|.+|+++.+.
T Consensus 164 ~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 198 (301)
T 1a4i_A 164 AGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK 198 (301)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence 34689999999 68999999999999999999643
No 443
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=83.22 E-value=1.2 Score=44.01 Aligned_cols=33 Identities=27% Similarity=0.393 Sum_probs=30.7
Q ss_pred CcEEEECC-ChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGG-GATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGg-Gi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
--|+|.|| |..|..++..|.++|++|+++.+..
T Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 41 (321)
T 3vps_A 8 HRILITGGAGFIGGHLARALVASGEEVTVLDDLR 41 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCS
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCEEEEEecCC
Confidence 46999999 9999999999999999999999864
No 444
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=83.19 E-value=1.1 Score=44.11 Aligned_cols=32 Identities=28% Similarity=0.334 Sum_probs=29.7
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
..|.|||+|..|...|..|++.|++|+++++.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 46999999999999999999999999999875
No 445
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=83.19 E-value=0.71 Score=47.29 Aligned_cols=33 Identities=21% Similarity=0.342 Sum_probs=30.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCC-------CeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRG-------LRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G-------~~V~lvEk~~ 104 (627)
..|.|||+|..|.+.|..|++.| .+|+++++..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~ 61 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDE 61 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECCh
Confidence 36999999999999999999999 9999998853
No 446
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=82.98 E-value=0.66 Score=47.04 Aligned_cols=33 Identities=21% Similarity=0.297 Sum_probs=30.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCC-------CeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRG-------LRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G-------~~V~lvEk~~ 104 (627)
..|.|||+|..|.+.|..|++.| .+|.++++..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~ 48 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEE 48 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcCh
Confidence 36999999999999999999999 8999999864
No 447
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=82.96 E-value=1.1 Score=48.27 Aligned_cols=36 Identities=25% Similarity=0.548 Sum_probs=32.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEcCCCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVEREDFS 106 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~~~~ 106 (627)
...|+|||+|-.|+.+|..|++.|. +++|+|.+.+.
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve 363 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 363 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCccc
Confidence 4689999999999999999999998 79999987543
No 448
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=82.95 E-value=1.3 Score=43.16 Aligned_cols=33 Identities=21% Similarity=0.372 Sum_probs=29.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEcCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~ 103 (627)
...++|+|+|-+|.++|+.|++.|. +|+|+.|.
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 3579999999999999999999996 89999874
No 449
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=82.78 E-value=1.1 Score=44.59 Aligned_cols=34 Identities=18% Similarity=0.456 Sum_probs=29.9
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC--eEEEEcCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~--~V~lvEk~ 103 (627)
....|+|||+|-+|.+.|+.|+.+|+ .|+|+|.+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 34689999999999999999999885 79999864
No 450
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=82.75 E-value=1 Score=45.65 Aligned_cols=35 Identities=23% Similarity=0.504 Sum_probs=31.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEcCCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVEREDF 105 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~~~ 105 (627)
...|+|||+|-.|+.+|..|++.|. +++|+|...+
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~V 153 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQI 153 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcC
Confidence 4689999999999999999999998 7999998654
No 451
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=82.73 E-value=0.92 Score=43.82 Aligned_cols=32 Identities=28% Similarity=0.461 Sum_probs=28.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCe-EEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLR-VGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~-V~lvEk~ 103 (627)
..|.|||+|..|...|..|++.|++ |.++++.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~ 43 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRT 43 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 3699999999999999999999998 8888864
No 452
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=82.71 E-value=0.84 Score=51.33 Aligned_cols=33 Identities=18% Similarity=0.153 Sum_probs=30.6
Q ss_pred CcEEEEC--CChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIG--GGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIG--gGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
-.|+||| ||.+|+-+|..|++.|.+|+|+++.+
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 4799999 99999999999999999999999865
No 453
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=82.69 E-value=0.74 Score=47.70 Aligned_cols=29 Identities=28% Similarity=0.416 Sum_probs=27.4
Q ss_pred cEEEECCChHHHHHHHHHHH-CCCeEEEEc
Q 006891 73 DILVIGGGATGCGVALDAAT-RGLRVGLVE 101 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~-~G~~V~lvE 101 (627)
.|.|||+|..|.+.|..|++ .|.+|++++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 59999999999999999998 499999998
No 454
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=82.68 E-value=1 Score=47.84 Aligned_cols=32 Identities=19% Similarity=0.333 Sum_probs=29.7
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATR--GLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~--G~~V~lvEk~ 103 (627)
..|.|||.|.+|+..|..|++. |++|++++++
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~ 43 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMN 43 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 4799999999999999999998 7999999986
No 455
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=82.59 E-value=0.99 Score=44.11 Aligned_cols=30 Identities=27% Similarity=0.257 Sum_probs=27.9
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 73 DILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
.|.|||+|..|...|..|++ |++|+++++.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~ 32 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRT 32 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSS
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCC
Confidence 49999999999999999999 9999999875
No 456
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=82.58 E-value=0.88 Score=43.91 Aligned_cols=32 Identities=25% Similarity=0.278 Sum_probs=28.8
Q ss_pred CcEEEECC-C-hHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGG-G-ATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGg-G-i~G~~~A~~La~~G~~V~lvEk~ 103 (627)
--++|.|| | -.|..+|..|+++|++|++++++
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~ 56 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLEGADVVISDYH 56 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCCchHHHHHHHHHHCCCEEEEecCC
Confidence 35899999 7 59999999999999999999875
No 457
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=82.50 E-value=1.2 Score=43.91 Aligned_cols=33 Identities=30% Similarity=0.343 Sum_probs=30.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
...|.|||+|.+|..+|..|...|.+|+++++.
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~ 189 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARS 189 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECC
Confidence 357999999999999999999999999999985
No 458
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=82.37 E-value=1.4 Score=44.35 Aligned_cols=32 Identities=25% Similarity=0.352 Sum_probs=29.1
Q ss_pred CcEEEECC-ChHHHHHHHHHHHCCC--eEEEEcCC
Q 006891 72 LDILVIGG-GATGCGVALDAATRGL--RVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGg-Gi~G~~~A~~La~~G~--~V~lvEk~ 103 (627)
..|+|||+ |.+|.++|+.++.+|+ .|+|+|..
T Consensus 9 ~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 9 EKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 47999998 9999999999999996 89999974
No 459
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=82.18 E-value=1.3 Score=44.61 Aligned_cols=31 Identities=26% Similarity=0.387 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 73 DILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
.|.|||.|..|.+.|..|++.|++|++.++.
T Consensus 18 ~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~ 48 (338)
T 1np3_A 18 KVAIIGYGSQGHAHACNLKDSGVDVTVGLRS 48 (338)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECCT
T ss_pred EEEEECchHHHHHHHHHHHHCcCEEEEEECC
Confidence 5999999999999999999999999998875
No 460
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=82.17 E-value=1.3 Score=42.67 Aligned_cols=31 Identities=35% Similarity=0.522 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 73 DILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
.|+|||+|.+|.++|..|.+.|.+|+++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~ 148 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRT 148 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 7999999999999999999999999999875
No 461
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=82.17 E-value=1.2 Score=43.57 Aligned_cols=33 Identities=18% Similarity=0.126 Sum_probs=30.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEcCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~ 103 (627)
...++|||+|-+|.++++.|++.|. +|+|+.|.
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt 155 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRN 155 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESC
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 4579999999999999999999998 89999875
No 462
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=82.15 E-value=1.3 Score=43.58 Aligned_cols=33 Identities=33% Similarity=0.421 Sum_probs=30.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
...|.|||.|.+|..+|..|...|.+|+++++.
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~ 187 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARE 187 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECC
Confidence 357999999999999999999999999999985
No 463
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=82.14 E-value=1.3 Score=42.24 Aligned_cols=31 Identities=16% Similarity=0.233 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHHHHCCC----eEEEEcCC
Q 006891 73 DILVIGGGATGCGVALDAATRGL----RVGLVERE 103 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G~----~V~lvEk~ 103 (627)
.|.|||+|..|.+.|..|++.|+ +|.+++++
T Consensus 4 ~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~ 38 (247)
T 3gt0_A 4 QIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLN 38 (247)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred eEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCC
Confidence 59999999999999999999998 99999875
No 464
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=82.09 E-value=1.1 Score=43.08 Aligned_cols=30 Identities=23% Similarity=0.201 Sum_probs=27.3
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEcC
Q 006891 73 DILVIGGGATGCGVALDAATRGLRVGLVER 102 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G~~V~lvEk 102 (627)
.|.|||.|..|...|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 489999999999999999999999998654
No 465
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=82.08 E-value=1.3 Score=44.24 Aligned_cols=32 Identities=16% Similarity=0.270 Sum_probs=29.3
Q ss_pred CcEEEECCChHHHHHHHHHHHCC----CeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRG----LRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G----~~V~lvEk~ 103 (627)
..|.|||+|..|.+.|..|++.| .+|+++++.
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~ 58 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPD 58 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCC
Confidence 46999999999999999999999 799999875
No 466
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=81.88 E-value=1.3 Score=43.38 Aligned_cols=33 Identities=24% Similarity=0.355 Sum_probs=29.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEcCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~ 103 (627)
...++|+|+|-+|.++|+.|++.|. +|+|+.|.
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred CCEEEEECchHHHHHHHHHHHhcCCCeEEEEECC
Confidence 3579999999999999999999996 89999874
No 467
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=81.85 E-value=0.93 Score=47.98 Aligned_cols=32 Identities=28% Similarity=0.317 Sum_probs=29.8
Q ss_pred CcEEEECCChHHHHHHHHHHHC--CCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATR--GLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~--G~~V~lvEk~ 103 (627)
..|.|||.|.+|+..|..|++. |++|++++++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~ 39 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVN 39 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 3699999999999999999999 8999999986
No 468
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=81.73 E-value=1.3 Score=44.16 Aligned_cols=34 Identities=24% Similarity=0.553 Sum_probs=30.4
Q ss_pred CCCcEEEECCChHHHHHHHHHHHCCC--eEEEEcCC
Q 006891 70 NPLDILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (627)
Q Consensus 70 ~~~DVvIIGgGi~G~~~A~~La~~G~--~V~lvEk~ 103 (627)
....|.|||+|.+|.++|+.|+..|+ .++|+|..
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 34579999999999999999999988 89999974
No 469
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=81.70 E-value=1.4 Score=43.28 Aligned_cols=32 Identities=28% Similarity=0.296 Sum_probs=29.4
Q ss_pred CcEEEEC-CChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIG-GGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIG-gGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
..++|+| +|-+|.++|..|+++|.+|+++.+.
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 4699999 8999999999999999999999874
No 470
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=81.48 E-value=1.3 Score=48.15 Aligned_cols=33 Identities=27% Similarity=0.477 Sum_probs=31.4
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
-.++|||+|-.|..+|..|.+.|.+|+++|++.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~ 381 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQE 381 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCh
Confidence 579999999999999999999999999999984
No 471
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=81.37 E-value=1.3 Score=43.02 Aligned_cols=34 Identities=21% Similarity=0.297 Sum_probs=30.0
Q ss_pred CCCcEEEECCC-hHHHHHHHHHHHCCCeEEEEcCC
Q 006891 70 NPLDILVIGGG-ATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 70 ~~~DVvIIGgG-i~G~~~A~~La~~G~~V~lvEk~ 103 (627)
...+|+|||+| ++|..+|..|...|.+|+++.+.
T Consensus 158 ~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 192 (288)
T 1b0a_A 158 FGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRF 192 (288)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSS
T ss_pred CCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 34689999999 68999999999999999999643
No 472
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=81.34 E-value=1.2 Score=43.96 Aligned_cols=33 Identities=21% Similarity=0.212 Sum_probs=27.7
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
-.|-+||-|..|...|..|++.|++|+++++..
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~ 38 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTA 38 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC----
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 359999999999999999999999999999863
No 473
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=81.18 E-value=1.2 Score=44.10 Aligned_cols=30 Identities=30% Similarity=0.522 Sum_probs=27.8
Q ss_pred EEEECCChHHHHHHHHHHHCCC-eEEEEcCC
Q 006891 74 ILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (627)
Q Consensus 74 VvIIGgGi~G~~~A~~La~~G~-~V~lvEk~ 103 (627)
|.|||+|.+|.++|+.++..|+ .|+|+|..
T Consensus 2 I~IiGaG~vG~~~a~~l~~~~l~el~L~Di~ 32 (308)
T 2d4a_B 2 ITILGAGKVGMATAVMLMMRGYDDLLLIART 32 (308)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCSCEEEECSS
T ss_pred EEEECcCHHHHHHHHHHHhCCCCEEEEEcCC
Confidence 8999999999999999999898 59999985
No 474
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=81.18 E-value=1.3 Score=46.81 Aligned_cols=56 Identities=11% Similarity=-0.096 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHc--------CCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh
Q 006891 233 RLNVGLALTAALA--------GAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (627)
Q Consensus 233 ~l~~~l~~~a~~~--------Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s 296 (627)
.++..+.+.+.+. |++|+++++|++|..+++ .++ |++ .+|+ ++.||.||+|++.+.
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~--~v~-v~~---~~g~--~~~ad~vI~a~~~~~ 270 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPG--GVT-VKT---EDNS--VYSADYVMVSASLGV 270 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSS--CEE-EEE---TTSC--EEEESEEEECSCHHH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCC--cEE-EEE---CCCC--EEEcCEEEEecCHHH
Confidence 5666676655544 789999999999998774 443 444 3454 689999999999754
No 475
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=80.96 E-value=1.6 Score=41.39 Aligned_cols=32 Identities=22% Similarity=0.230 Sum_probs=29.1
Q ss_pred cEEEECC-ChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 73 DILVIGG-GATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 73 DVvIIGg-Gi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
-|+|.|| |-.|..+|..|+++|++|+++.+..
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~ 35 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLARAGHTVIGIDRGQ 35 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCh
Confidence 3899998 9999999999999999999999864
No 476
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=80.87 E-value=1.6 Score=43.42 Aligned_cols=33 Identities=21% Similarity=0.517 Sum_probs=29.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEcCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~ 103 (627)
...++|+|+|-+|.++|+.|++.|. +|+|+.|.
T Consensus 148 gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 3579999999999999999999998 79999875
No 477
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=80.69 E-value=1.5 Score=42.31 Aligned_cols=33 Identities=9% Similarity=0.203 Sum_probs=29.4
Q ss_pred CCCcEEEECCC-hHHHHHHHHHHHCCCeEEEEcC
Q 006891 70 NPLDILVIGGG-ATGCGVALDAATRGLRVGLVER 102 (627)
Q Consensus 70 ~~~DVvIIGgG-i~G~~~A~~La~~G~~V~lvEk 102 (627)
....++|||.| ++|..+|..|...|.+|+++.+
T Consensus 149 ~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~ 182 (276)
T 3ngx_A 149 HENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHS 182 (276)
T ss_dssp CSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeC
Confidence 34689999976 7999999999999999999975
No 478
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=80.67 E-value=1.9 Score=40.68 Aligned_cols=32 Identities=31% Similarity=0.398 Sum_probs=28.7
Q ss_pred CcEEEECC-ChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGG-GATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGg-Gi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
--|+|.|| |-.|..+|..|+++|++|+++.++
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 3d3w_A 8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRT 40 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35899998 899999999999999999999875
No 479
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=80.64 E-value=1.7 Score=43.93 Aligned_cols=36 Identities=17% Similarity=0.374 Sum_probs=32.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEcCCCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVEREDFS 106 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~~~~ 106 (627)
...|+|||+|..|+.+|..|++.|. +++|+|...+.
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V~ 72 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVT 72 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCcc
Confidence 4789999999999999999999998 89999987543
No 480
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=80.46 E-value=1.6 Score=45.44 Aligned_cols=35 Identities=26% Similarity=0.625 Sum_probs=31.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCC-eEEEEcCCCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVEREDF 105 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~~~ 105 (627)
...|+|||+|-.|+.+|..|++.|. +++|+|...+
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~V 75 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTI 75 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCBC
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCEe
Confidence 3689999999999999999999998 7999998654
No 481
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=80.46 E-value=1.5 Score=42.97 Aligned_cols=34 Identities=21% Similarity=0.195 Sum_probs=29.6
Q ss_pred CCCcEEEECC-ChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 70 NPLDILVIGG-GATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 70 ~~~DVvIIGg-Gi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
.-..++|||. |++|..+|..|...|..|+++.+.
T Consensus 164 ~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~ 198 (300)
T 4a26_A 164 AGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG 198 (300)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 3468999995 569999999999999999999763
No 482
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=80.29 E-value=1.6 Score=46.25 Aligned_cols=33 Identities=30% Similarity=0.440 Sum_probs=30.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 71 ~~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
.-.|+|||.|.+|..+|..|...|.+|+++|+.
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~ 306 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQGARVSVTEID 306 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 346999999999999999999999999999975
No 483
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=79.96 E-value=2.2 Score=40.29 Aligned_cols=32 Identities=28% Similarity=0.325 Sum_probs=28.8
Q ss_pred CcEEEECC-ChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGG-GATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGg-Gi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
--|+|.|| |-.|..+|..|+++|++|+++.+.
T Consensus 8 ~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 8 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 35899998 899999999999999999999875
No 484
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=79.55 E-value=1.7 Score=42.16 Aligned_cols=34 Identities=21% Similarity=0.263 Sum_probs=29.4
Q ss_pred CCCcEEEECC-ChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 70 NPLDILVIGG-GATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 70 ~~~DVvIIGg-Gi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
....++|||. |++|..+|..|...|..|+++.+.
T Consensus 159 ~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~ 193 (285)
T 3p2o_A 159 EGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK 193 (285)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 3468999996 568999999999999999999753
No 485
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=79.54 E-value=2.4 Score=39.31 Aligned_cols=31 Identities=16% Similarity=0.289 Sum_probs=28.5
Q ss_pred cEEEECC-ChHHHHHHHHHH-HCCCeEEEEcCC
Q 006891 73 DILVIGG-GATGCGVALDAA-TRGLRVGLVERE 103 (627)
Q Consensus 73 DVvIIGg-Gi~G~~~A~~La-~~G~~V~lvEk~ 103 (627)
-|+|+|| |-.|..+|..|+ ++|++|+++.++
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESS
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecC
Confidence 3999995 999999999999 899999999886
No 486
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=79.52 E-value=1.5 Score=40.96 Aligned_cols=33 Identities=33% Similarity=0.519 Sum_probs=30.1
Q ss_pred CcEEEECC-ChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGG-GATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGg-Gi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
..|+|+|| |..|..++..|.++|++|.++.+..
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 36999996 9999999999999999999999874
No 487
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=79.46 E-value=1.7 Score=42.24 Aligned_cols=32 Identities=19% Similarity=0.387 Sum_probs=29.4
Q ss_pred CcEEEECCChHHHHHHHHHHHCCC-eEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~-~V~lvEk~ 103 (627)
..++|||+|-+|.++++.|++.|. +|+|+.|.
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 479999999999999999999997 79999875
No 488
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=79.45 E-value=3.3 Score=43.08 Aligned_cols=32 Identities=28% Similarity=0.527 Sum_probs=29.6
Q ss_pred cEEEECCChHHHHHHHHHHHCC--CeEEEEcCCC
Q 006891 73 DILVIGGGATGCGVALDAATRG--LRVGLVERED 104 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G--~~V~lvEk~~ 104 (627)
.|||||||.+|+++|..|++.+ ++|+|||+++
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~ 37 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCC
Confidence 6999999999999999999865 7999999986
No 489
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=79.41 E-value=1.8 Score=42.10 Aligned_cols=33 Identities=27% Similarity=0.421 Sum_probs=29.0
Q ss_pred CCCcEEEECC-ChHHHHHHHHHHHCCCeEEEEcC
Q 006891 70 NPLDILVIGG-GATGCGVALDAATRGLRVGLVER 102 (627)
Q Consensus 70 ~~~DVvIIGg-Gi~G~~~A~~La~~G~~V~lvEk 102 (627)
.-..++|||. |++|..+|..|...|..|+++.+
T Consensus 160 ~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs 193 (286)
T 4a5o_A 160 YGMDAVVVGASNIVGRPMALELLLGGCTVTVTHR 193 (286)
T ss_dssp TTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeC
Confidence 3468999995 57999999999999999999965
No 490
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=79.20 E-value=1.6 Score=42.24 Aligned_cols=32 Identities=16% Similarity=0.296 Sum_probs=28.7
Q ss_pred cEEEECC---ChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 73 DILVIGG---GATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 73 DVvIIGg---Gi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
-++|.|| |-.|..+|..|+++|++|+++.++.
T Consensus 8 ~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~ 42 (275)
T 2pd4_A 8 KGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE 42 (275)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST
T ss_pred EEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4899997 5899999999999999999998754
No 491
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=78.75 E-value=2.1 Score=42.99 Aligned_cols=33 Identities=27% Similarity=0.281 Sum_probs=30.2
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
..|.|||.|..|..+|..|+..|.+|+++++..
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 183 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTR 183 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEECCCc
Confidence 469999999999999999999999999998753
No 492
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=78.50 E-value=1.4 Score=43.20 Aligned_cols=29 Identities=24% Similarity=0.383 Sum_probs=27.7
Q ss_pred cEEEECCChHHHHHHHHHHHCCCeEEEEc
Q 006891 73 DILVIGGGATGCGVALDAATRGLRVGLVE 101 (627)
Q Consensus 73 DVvIIGgGi~G~~~A~~La~~G~~V~lvE 101 (627)
.|.|||+|..|...|..|++.|++|++++
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 5 KLGFIGLGIMGSPMAINLARAGHQLHVTT 33 (295)
T ss_dssp EEEECCCSTTHHHHHHHHHHTTCEEEECC
T ss_pred EEEEEccCHHHHHHHHHHHhCCCEEEEEc
Confidence 59999999999999999999999999987
No 493
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=78.50 E-value=2 Score=45.20 Aligned_cols=57 Identities=23% Similarity=0.169 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEcCCCCeEEEEEEEecCCCcEEEEEcCeEEeccCCCh
Q 006891 232 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 296 (627)
Q Consensus 232 ~~l~~~l~~~a~~~Gv~i~~~t~V~~l~~~~~g~~v~gV~~~d~~~g~~~~i~A~~VV~AtG~~s 296 (627)
..++..+++.+ |++|+++++|++|..++++ +.|++++. + +..++.||.||+|++++.
T Consensus 238 ~~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~---~~v~~~~~-~-~g~~~~ad~vV~a~~~~~ 294 (478)
T 2ivd_A 238 QVLIDALAASL---GDAAHVGARVEGLAREDGG---WRLIIEEH-G-RRAELSVAQVVLAAPAHA 294 (478)
T ss_dssp HHHHHHHHHHH---GGGEESSEEEEEEECC--C---CEEEEEET-T-EEEEEECSEEEECSCHHH
T ss_pred HHHHHHHHHHh---hhhEEcCCEEEEEEecCCe---EEEEEeec-C-CCceEEcCEEEECCCHHH
Confidence 45666666554 6799999999999987643 34555220 1 124789999999999875
No 494
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=78.39 E-value=2.1 Score=44.22 Aligned_cols=32 Identities=25% Similarity=0.305 Sum_probs=29.9
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
-.|+|||.|.+|..+|..|...|.+|+++|++
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~d 252 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMGSIVYVTEID 252 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47999999999999999999999999999975
No 495
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=78.38 E-value=2 Score=41.76 Aligned_cols=33 Identities=18% Similarity=0.129 Sum_probs=28.8
Q ss_pred CCCcEEEECC-ChHHHHHHHHHHHCCCeEEEEcC
Q 006891 70 NPLDILVIGG-GATGCGVALDAATRGLRVGLVER 102 (627)
Q Consensus 70 ~~~DVvIIGg-Gi~G~~~A~~La~~G~~V~lvEk 102 (627)
....++|||. |++|..+|..|...|..|+++.+
T Consensus 160 ~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs 193 (285)
T 3l07_A 160 EGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHR 193 (285)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeC
Confidence 3468999995 56899999999999999999965
No 496
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=78.29 E-value=2.3 Score=42.64 Aligned_cols=35 Identities=17% Similarity=0.114 Sum_probs=31.1
Q ss_pred CCCcEEEECC-ChHHHHHHHHHHHCCCeEEEEcCCC
Q 006891 70 NPLDILVIGG-GATGCGVALDAATRGLRVGLVERED 104 (627)
Q Consensus 70 ~~~DVvIIGg-Gi~G~~~A~~La~~G~~V~lvEk~~ 104 (627)
..--|+|.|| |..|..++..|.++|++|+++.+..
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 59 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFS 59 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 3457999996 9999999999999999999998864
No 497
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=78.19 E-value=1.7 Score=41.71 Aligned_cols=32 Identities=13% Similarity=0.145 Sum_probs=29.1
Q ss_pred CcEEEECCChHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgGi~G~~~A~~La~~G~~V~lvEk~ 103 (627)
..|.|||.|..|...|..|.+.|.+|.+++++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~ 35 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSS 35 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSS
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCC
Confidence 36999999999999999999999999998874
No 498
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=78.04 E-value=2.6 Score=40.51 Aligned_cols=32 Identities=22% Similarity=0.282 Sum_probs=27.7
Q ss_pred CcEEEECC-Ch--HHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGG-GA--TGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGg-Gi--~G~~~A~~La~~G~~V~lvEk~ 103 (627)
--++|.|| |. .|..+|..|+++|++|+++.+.
T Consensus 8 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~ 42 (266)
T 3oig_A 8 RNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAG 42 (266)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCc
Confidence 35899997 45 8999999999999999999775
No 499
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=78.04 E-value=2.2 Score=43.51 Aligned_cols=35 Identities=20% Similarity=0.314 Sum_probs=31.7
Q ss_pred CCCcEEEECC-ChHHHHHHHHHHHCCC---eEEEEcCCC
Q 006891 70 NPLDILVIGG-GATGCGVALDAATRGL---RVGLVERED 104 (627)
Q Consensus 70 ~~~DVvIIGg-Gi~G~~~A~~La~~G~---~V~lvEk~~ 104 (627)
....|+|||| |.+|..++..|...|. +|.++|.+.
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~ 251 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKE 251 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHH
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccc
Confidence 4578999999 9999999999999998 999999864
No 500
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=77.92 E-value=2 Score=42.23 Aligned_cols=32 Identities=22% Similarity=0.286 Sum_probs=28.4
Q ss_pred CcEEEECCC---hHHHHHHHHHHHCCCeEEEEcCC
Q 006891 72 LDILVIGGG---ATGCGVALDAATRGLRVGLVERE 103 (627)
Q Consensus 72 ~DVvIIGgG---i~G~~~A~~La~~G~~V~lvEk~ 103 (627)
--++|.||+ -.|.++|..|+++|++|+++.+.
T Consensus 31 k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~ 65 (296)
T 3k31_A 31 KKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLS 65 (296)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCC
Confidence 358999985 78999999999999999999875
Done!