Query 006894
Match_columns 627
No_of_seqs 351 out of 1432
Neff 5.5
Searched_HMMs 46136
Date Thu Mar 28 16:00:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006894.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006894hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02869 fatty aldehyde decarb 100.0 2E-192 4E-197 1566.8 48.1 608 1-626 1-619 (620)
2 PF12076 Wax2_C: WAX2 C-termin 100.0 5.2E-60 1.1E-64 444.3 10.3 155 466-622 1-164 (164)
3 PRK14982 acyl-ACP reductase; P 100.0 2.3E-36 5.1E-41 320.3 20.1 260 357-624 35-338 (340)
4 COG5322 Predicted dehydrogenas 100.0 2E-36 4.4E-41 305.1 14.3 223 390-624 87-351 (351)
5 KOG0873 C-4 sterol methyl oxid 100.0 5.8E-33 1.3E-37 283.0 14.5 215 50-277 35-260 (283)
6 COG3000 ERG3 Sterol desaturase 99.9 1.4E-26 3E-31 239.6 15.6 152 127-287 94-247 (271)
7 KOG0872 Sterol C5 desaturase [ 99.9 9.5E-24 2.1E-28 213.0 10.9 144 126-283 126-269 (312)
8 KOG0874 Sphingolipid hydroxyla 99.8 1.3E-20 2.8E-25 185.1 0.7 147 128-284 122-273 (287)
9 PF04116 FA_hydroxylase: Fatty 99.7 5.6E-17 1.2E-21 144.5 7.7 111 134-254 3-114 (114)
10 cd01078 NAD_bind_H4MPT_DH NADP 99.3 1.8E-11 3.9E-16 120.1 11.4 154 445-618 1-194 (194)
11 PLN02434 fatty acid hydroxylas 99.1 3.6E-09 7.7E-14 107.9 15.4 136 128-277 83-230 (237)
12 KOG0539 Sphingolipid fatty aci 97.8 9.1E-05 2E-09 74.0 8.2 136 130-278 85-234 (240)
13 PLN02601 beta-carotene hydroxy 97.6 0.00059 1.3E-08 70.5 11.2 132 118-265 126-272 (303)
14 COG4221 Short-chain alcohol de 97.2 0.00059 1.3E-08 70.2 5.8 44 464-509 7-52 (246)
15 COG0300 DltE Short-chain dehyd 97.1 0.00066 1.4E-08 70.9 5.3 49 461-511 4-54 (265)
16 PRK07424 bifunctional sterol d 96.9 0.003 6.6E-08 69.8 8.7 136 137-275 17-174 (406)
17 KOG1014 17 beta-hydroxysteroid 96.8 0.0012 2.7E-08 69.9 4.3 79 464-544 50-138 (312)
18 PF01488 Shikimate_DH: Shikima 96.7 0.0036 7.9E-08 58.5 6.3 43 462-507 11-56 (135)
19 cd01080 NAD_bind_m-THF_DH_Cycl 96.4 0.0096 2.1E-07 58.2 7.4 89 448-546 27-120 (168)
20 PRK14192 bifunctional 5,10-met 96.1 0.015 3.2E-07 61.5 7.2 132 388-541 99-231 (283)
21 TIGR00507 aroE shikimate 5-deh 95.9 0.014 3.1E-07 60.6 6.5 60 445-507 99-160 (270)
22 PRK00258 aroE shikimate 5-dehy 95.9 0.019 4.1E-07 60.1 7.3 62 444-508 103-168 (278)
23 PRK08618 ornithine cyclodeamin 95.9 0.049 1.1E-06 58.3 10.4 127 409-540 64-220 (325)
24 COG1086 Predicted nucleoside-d 95.8 0.046 1E-06 62.4 9.8 81 462-544 249-339 (588)
25 PRK00045 hemA glutamyl-tRNA re 95.7 0.021 4.5E-07 63.4 7.0 145 461-617 180-361 (423)
26 cd05212 NAD_bind_m-THF_DH_Cycl 95.5 0.048 1E-06 51.9 7.7 76 458-541 23-100 (140)
27 PRK06196 oxidoreductase; Provi 95.5 0.027 5.7E-07 59.2 6.4 55 451-507 14-70 (315)
28 PRK06407 ornithine cyclodeamin 95.4 0.077 1.7E-06 56.5 9.5 123 409-541 62-212 (301)
29 PLN02780 ketoreductase/ oxidor 95.4 0.018 4E-07 61.2 4.8 45 463-509 53-99 (320)
30 cd01065 NAD_bind_Shikimate_DH 95.2 0.083 1.8E-06 49.4 8.1 61 445-508 1-64 (155)
31 PRK06046 alanine dehydrogenase 95.2 0.11 2.4E-06 55.7 10.0 131 408-541 65-223 (326)
32 PRK06949 short chain dehydroge 95.2 0.034 7.4E-07 55.8 5.8 47 460-508 6-54 (258)
33 TIGR02371 ala_DH_arch alanine 95.2 0.12 2.7E-06 55.4 10.3 131 408-542 64-223 (325)
34 PF02423 OCD_Mu_crystall: Orni 95.1 0.067 1.4E-06 57.1 8.0 130 408-541 64-224 (313)
35 PRK07340 ornithine cyclodeamin 95.1 0.13 2.8E-06 54.7 10.1 97 409-508 62-171 (304)
36 PRK05867 short chain dehydroge 95.0 0.03 6.5E-07 56.4 5.0 46 462-509 8-55 (253)
37 PRK06141 ornithine cyclodeamin 95.0 0.14 3.1E-06 54.6 10.3 131 408-541 61-219 (314)
38 PLN03209 translocon at the inn 95.0 0.04 8.6E-07 63.5 6.1 59 447-507 59-124 (576)
39 PRK06101 short chain dehydroge 94.9 0.038 8.1E-07 55.4 5.2 41 464-506 2-44 (240)
40 PRK08265 short chain dehydroge 94.9 0.038 8.2E-07 56.2 5.2 44 463-508 6-51 (261)
41 PRK06482 short chain dehydroge 94.9 0.041 8.9E-07 56.2 5.5 42 464-507 3-46 (276)
42 PLN00203 glutamyl-tRNA reducta 94.9 0.11 2.4E-06 59.4 9.4 202 395-617 199-450 (519)
43 PF13460 NAD_binding_10: NADH( 94.8 0.039 8.4E-07 52.7 4.9 35 466-502 1-37 (183)
44 PRK06823 ornithine cyclodeamin 94.8 0.18 3.9E-06 54.1 10.4 129 409-541 64-222 (315)
45 PRK05854 short chain dehydroge 94.8 0.034 7.4E-07 58.6 4.9 45 463-509 14-60 (313)
46 PRK14175 bifunctional 5,10-met 94.8 0.055 1.2E-06 57.4 6.2 153 393-554 44-245 (286)
47 PRK12548 shikimate 5-dehydroge 94.7 0.09 1.9E-06 55.5 7.8 61 445-508 108-174 (289)
48 PRK07523 gluconate 5-dehydroge 94.7 0.045 9.7E-07 55.1 5.3 45 462-508 9-55 (255)
49 PRK07063 short chain dehydroge 94.7 0.039 8.5E-07 55.7 4.9 45 463-509 7-53 (260)
50 PRK09186 flagellin modificatio 94.7 0.045 9.8E-07 54.8 5.1 45 463-509 4-50 (256)
51 PRK07825 short chain dehydroge 94.7 0.045 9.8E-07 55.8 5.2 43 464-508 6-50 (273)
52 PRK12829 short chain dehydroge 94.7 0.051 1.1E-06 54.6 5.4 45 462-508 10-56 (264)
53 PRK13940 glutamyl-tRNA reducta 94.7 0.061 1.3E-06 59.8 6.5 202 395-617 116-354 (414)
54 PRK07890 short chain dehydroge 94.6 0.043 9.4E-07 55.0 4.9 44 463-508 5-50 (258)
55 TIGR01963 PHB_DH 3-hydroxybuty 94.6 0.044 9.6E-07 54.6 4.7 42 464-507 2-45 (255)
56 TIGR02853 spore_dpaA dipicolin 94.5 0.16 3.4E-06 53.7 8.9 120 405-544 108-243 (287)
57 PRK08085 gluconate 5-dehydroge 94.5 0.051 1.1E-06 54.7 5.1 45 462-508 8-54 (254)
58 PRK08339 short chain dehydroge 94.5 0.047 1E-06 55.9 4.8 45 463-509 8-54 (263)
59 PRK07024 short chain dehydroge 94.5 0.059 1.3E-06 54.5 5.5 44 464-509 3-48 (257)
60 PRK08267 short chain dehydroge 94.5 0.056 1.2E-06 54.6 5.2 43 464-508 2-46 (260)
61 cd05213 NAD_bind_Glutamyl_tRNA 94.5 0.061 1.3E-06 57.3 5.7 106 391-508 110-223 (311)
62 PRK12429 3-hydroxybutyrate deh 94.4 0.052 1.1E-06 54.2 4.9 43 464-508 5-49 (258)
63 PF10520 Kua-UEV1_localn: Kua- 94.4 0.1 2.2E-06 51.7 6.7 54 215-273 99-155 (178)
64 PRK07478 short chain dehydroge 94.4 0.053 1.1E-06 54.6 4.8 44 463-508 6-51 (254)
65 PRK08340 glucose-1-dehydrogena 94.4 0.053 1.2E-06 54.9 4.8 43 465-509 2-46 (259)
66 PRK07326 short chain dehydroge 94.3 0.057 1.2E-06 53.4 4.9 45 463-509 6-52 (237)
67 PRK05993 short chain dehydroge 94.3 0.061 1.3E-06 55.3 5.2 40 464-505 5-46 (277)
68 PRK07062 short chain dehydroge 94.3 0.059 1.3E-06 54.6 5.0 46 462-509 7-54 (265)
69 PRK06139 short chain dehydroge 94.3 0.053 1.2E-06 58.0 4.9 44 463-508 7-52 (330)
70 PRK06124 gluconate 5-dehydroge 94.3 0.063 1.4E-06 54.0 5.2 46 461-508 9-56 (256)
71 PRK07067 sorbitol dehydrogenas 94.3 0.065 1.4E-06 54.0 5.2 44 463-508 6-51 (257)
72 PRK07231 fabG 3-ketoacyl-(acyl 94.3 0.066 1.4E-06 53.3 5.2 44 463-508 5-50 (251)
73 PRK08017 oxidoreductase; Provi 94.3 0.065 1.4E-06 53.7 5.2 40 464-505 3-44 (256)
74 PRK05884 short chain dehydroge 94.2 0.064 1.4E-06 53.6 5.0 41 465-507 2-44 (223)
75 TIGR03325 BphB_TodD cis-2,3-di 94.2 0.072 1.6E-06 54.0 5.4 43 463-507 5-49 (262)
76 PRK05872 short chain dehydroge 94.2 0.071 1.5E-06 55.6 5.5 46 462-509 8-55 (296)
77 PRK06200 2,3-dihydroxy-2,3-dih 94.2 0.072 1.6E-06 54.0 5.3 44 463-508 6-51 (263)
78 COG2423 Predicted ornithine cy 94.2 0.22 4.8E-06 53.8 9.2 131 408-542 66-226 (330)
79 PRK05866 short chain dehydroge 94.1 0.062 1.4E-06 56.1 4.9 44 463-508 40-85 (293)
80 PRK08063 enoyl-(acyl carrier p 94.1 0.066 1.4E-06 53.4 4.9 42 464-507 5-49 (250)
81 PRK06500 short chain dehydroge 94.1 0.074 1.6E-06 53.0 5.2 43 464-508 7-51 (249)
82 PRK08643 acetoin reductase; Va 94.1 0.064 1.4E-06 53.9 4.8 43 464-508 3-47 (256)
83 PRK07589 ornithine cyclodeamin 94.1 0.29 6.2E-06 53.3 9.9 130 408-541 65-225 (346)
84 PRK08251 short chain dehydroge 94.1 0.075 1.6E-06 53.1 5.1 44 464-509 3-48 (248)
85 PF01118 Semialdhyde_dh: Semia 94.0 0.14 3.1E-06 46.8 6.4 86 465-555 1-109 (121)
86 KOG1208 Dehydrogenases with di 94.0 0.069 1.5E-06 57.3 5.0 53 455-509 27-81 (314)
87 PRK06180 short chain dehydroge 94.0 0.084 1.8E-06 54.2 5.4 42 463-506 4-47 (277)
88 PRK08703 short chain dehydroge 94.0 0.071 1.5E-06 53.1 4.8 44 463-508 6-51 (239)
89 PLN02253 xanthoxin dehydrogena 93.9 0.11 2.3E-06 53.3 6.0 45 463-509 18-64 (280)
90 PRK08862 short chain dehydroge 93.9 0.074 1.6E-06 53.6 4.8 44 463-508 5-50 (227)
91 PRK06057 short chain dehydroge 93.9 0.088 1.9E-06 53.1 5.3 44 463-508 7-52 (255)
92 PRK05876 short chain dehydroge 93.9 0.074 1.6E-06 54.9 4.8 44 463-508 6-51 (275)
93 PRK12828 short chain dehydroge 93.9 0.089 1.9E-06 51.7 5.2 42 463-506 7-50 (239)
94 PRK06924 short chain dehydroge 93.8 0.085 1.8E-06 52.8 5.0 41 464-506 2-45 (251)
95 PRK06182 short chain dehydroge 93.8 0.095 2.1E-06 53.5 5.4 41 463-505 3-45 (273)
96 PRK14194 bifunctional 5,10-met 93.8 0.11 2.4E-06 55.5 6.0 141 393-541 45-231 (301)
97 PRK08213 gluconate 5-dehydroge 93.8 0.083 1.8E-06 53.3 5.0 44 463-508 12-57 (259)
98 PRK07109 short chain dehydroge 93.8 0.08 1.7E-06 56.6 5.1 45 462-508 7-53 (334)
99 PF00106 adh_short: short chai 93.8 0.08 1.7E-06 49.4 4.5 43 464-508 1-48 (167)
100 PRK06197 short chain dehydroge 93.8 0.088 1.9E-06 54.9 5.2 44 462-507 15-60 (306)
101 PRK05717 oxidoreductase; Valid 93.7 0.11 2.4E-06 52.3 5.8 44 462-507 9-54 (255)
102 PRK10538 malonic semialdehyde 93.7 0.096 2.1E-06 52.7 5.3 42 465-508 2-45 (248)
103 PRK12826 3-ketoacyl-(acyl-carr 93.7 0.081 1.8E-06 52.5 4.6 43 464-508 7-51 (251)
104 PRK06172 short chain dehydroge 93.7 0.09 2E-06 52.8 5.0 44 463-508 7-52 (253)
105 PRK09291 short chain dehydroge 93.7 0.092 2E-06 52.6 5.0 41 464-506 3-45 (257)
106 PRK05875 short chain dehydroge 93.7 0.1 2.3E-06 53.1 5.4 44 462-507 6-51 (276)
107 PRK12550 shikimate 5-dehydroge 93.6 0.14 3E-06 53.8 6.4 97 444-544 104-219 (272)
108 PRK06194 hypothetical protein; 93.6 0.086 1.9E-06 54.0 4.8 43 464-508 7-51 (287)
109 PRK07454 short chain dehydroge 93.6 0.091 2E-06 52.3 4.8 44 463-508 6-51 (241)
110 PRK09072 short chain dehydroge 93.6 0.1 2.3E-06 52.8 5.3 43 463-507 5-49 (263)
111 PRK07035 short chain dehydroge 93.6 0.091 2E-06 52.7 4.8 45 463-509 8-54 (252)
112 PRK05786 fabG 3-ketoacyl-(acyl 93.6 0.094 2E-06 51.9 4.9 43 464-508 6-50 (238)
113 PRK12742 oxidoreductase; Provi 93.6 0.11 2.4E-06 51.4 5.3 43 463-507 6-51 (237)
114 PRK07097 gluconate 5-dehydroge 93.5 0.11 2.3E-06 52.8 5.3 49 458-508 5-55 (265)
115 PRK07453 protochlorophyllide o 93.5 0.1 2.2E-06 55.0 5.2 43 463-507 6-50 (322)
116 PRK07102 short chain dehydroge 93.5 0.098 2.1E-06 52.3 4.9 42 464-507 2-45 (243)
117 PRK06125 short chain dehydroge 93.5 0.099 2.2E-06 52.8 4.9 45 463-509 7-53 (259)
118 PLN02968 Probable N-acetyl-gam 93.5 0.12 2.7E-06 56.8 6.0 125 462-595 37-196 (381)
119 PRK13394 3-hydroxybutyrate deh 93.5 0.096 2.1E-06 52.5 4.8 43 463-507 7-51 (262)
120 PRK07832 short chain dehydroge 93.5 0.099 2.2E-06 53.4 5.0 42 464-507 1-44 (272)
121 PRK08945 putative oxoacyl-(acy 93.5 0.1 2.2E-06 52.3 4.9 46 462-509 11-58 (247)
122 PRK07677 short chain dehydroge 93.5 0.099 2.2E-06 52.6 4.8 43 464-508 2-46 (252)
123 PRK08177 short chain dehydroge 93.4 0.11 2.3E-06 51.6 4.9 39 464-504 2-42 (225)
124 PRK12384 sorbitol-6-phosphate 93.4 0.11 2.3E-06 52.4 4.9 43 464-508 3-47 (259)
125 PRK05653 fabG 3-ketoacyl-(acyl 93.4 0.11 2.4E-06 51.2 4.9 43 464-508 6-50 (246)
126 PRK12939 short chain dehydroge 93.4 0.12 2.6E-06 51.4 5.2 43 463-507 7-51 (250)
127 PRK07074 short chain dehydroge 93.4 0.12 2.5E-06 52.1 5.2 43 464-508 3-47 (257)
128 PRK08263 short chain dehydroge 93.4 0.12 2.7E-06 52.8 5.4 42 464-507 4-47 (275)
129 PRK06935 2-deoxy-D-gluconate 3 93.4 0.12 2.6E-06 52.2 5.2 43 462-507 14-58 (258)
130 PRK06947 glucose-1-dehydrogena 93.3 0.11 2.4E-06 51.9 4.9 42 464-507 3-47 (248)
131 KOG1205 Predicted dehydrogenas 93.3 0.084 1.8E-06 55.9 4.1 45 463-509 12-58 (282)
132 PRK07774 short chain dehydroge 93.3 0.11 2.5E-06 51.7 4.9 43 463-507 6-50 (250)
133 PRK06914 short chain dehydroge 93.3 0.12 2.6E-06 52.8 5.1 42 464-507 4-47 (280)
134 PRK08277 D-mannonate oxidoredu 93.3 0.11 2.4E-06 53.1 4.8 44 463-508 10-55 (278)
135 PRK07831 short chain dehydroge 93.3 0.11 2.4E-06 52.7 4.8 46 463-509 17-64 (262)
136 PRK08589 short chain dehydroge 93.3 0.11 2.4E-06 53.3 4.8 43 463-508 6-50 (272)
137 PRK06138 short chain dehydroge 93.2 0.13 2.8E-06 51.3 5.2 44 463-508 5-50 (252)
138 PRK05599 hypothetical protein; 93.2 0.11 2.5E-06 52.4 4.7 42 465-509 2-45 (246)
139 PRK12936 3-ketoacyl-(acyl-carr 93.2 0.14 3E-06 50.8 5.3 43 463-507 6-50 (245)
140 PRK05650 short chain dehydroge 93.2 0.11 2.5E-06 52.8 4.8 41 465-507 2-44 (270)
141 PRK05693 short chain dehydroge 93.2 0.13 2.9E-06 52.5 5.2 40 464-505 2-43 (274)
142 PRK09242 tropinone reductase; 93.2 0.12 2.6E-06 52.1 4.8 44 463-508 9-54 (257)
143 PRK07775 short chain dehydroge 93.1 0.13 2.9E-06 52.7 5.1 44 462-507 9-54 (274)
144 TIGR02415 23BDH acetoin reduct 93.0 0.13 2.7E-06 51.6 4.8 43 464-508 1-45 (254)
145 PRK07814 short chain dehydroge 93.0 0.14 3.1E-06 52.0 5.2 44 462-507 9-54 (263)
146 TIGR03206 benzo_BadH 2-hydroxy 93.0 0.14 3.1E-06 50.9 5.1 44 463-508 3-48 (250)
147 PRK06953 short chain dehydroge 93.0 0.14 3E-06 50.6 5.0 40 464-505 2-43 (222)
148 PRK07666 fabG 3-ketoacyl-(acyl 93.0 0.15 3.2E-06 50.8 5.2 43 463-507 7-51 (239)
149 PRK07904 short chain dehydroge 92.9 0.14 3E-06 52.2 4.9 45 463-509 8-56 (253)
150 PRK12825 fabG 3-ketoacyl-(acyl 92.9 0.14 3E-06 50.5 4.7 42 464-507 7-51 (249)
151 PF02882 THF_DHG_CYH_C: Tetrah 92.9 0.16 3.4E-06 49.6 5.0 75 459-541 32-108 (160)
152 PRK05557 fabG 3-ketoacyl-(acyl 92.9 0.15 3.3E-06 50.2 5.0 43 463-507 5-50 (248)
153 PRK12746 short chain dehydroge 92.8 0.15 3.2E-06 51.1 4.9 42 464-507 7-51 (254)
154 PRK09135 pteridine reductase; 92.8 0.15 3.3E-06 50.5 5.0 43 463-507 6-51 (249)
155 PRK08416 7-alpha-hydroxysteroi 92.8 0.14 3.1E-06 51.9 4.8 44 463-508 8-54 (260)
156 PRK06199 ornithine cyclodeamin 92.8 0.54 1.2E-05 51.8 9.5 99 409-510 92-204 (379)
157 PRK14179 bifunctional 5,10-met 92.7 0.16 3.5E-06 53.8 5.3 97 450-554 140-245 (284)
158 COG0373 HemA Glutamyl-tRNA red 92.7 0.36 7.9E-06 53.7 8.1 118 462-591 177-320 (414)
159 COG0702 Predicted nucleoside-d 92.7 0.13 2.7E-06 51.9 4.3 38 465-504 2-41 (275)
160 TIGR01289 LPOR light-dependent 92.7 0.16 3.6E-06 53.5 5.3 44 463-508 3-49 (314)
161 PRK14189 bifunctional 5,10-met 92.7 0.21 4.6E-06 52.9 6.0 152 394-554 45-245 (285)
162 PLN00141 Tic62-NAD(P)-related 92.6 0.16 3.5E-06 51.5 4.9 39 463-503 17-57 (251)
163 PRK06181 short chain dehydroge 92.6 0.16 3.4E-06 51.3 4.8 43 464-508 2-46 (263)
164 PRK08264 short chain dehydroge 92.6 0.15 3.3E-06 50.5 4.6 37 463-501 6-45 (238)
165 PRK07060 short chain dehydroge 92.6 0.22 4.7E-06 49.5 5.7 44 462-507 8-53 (245)
166 PRK07576 short chain dehydroge 92.6 0.18 3.9E-06 51.4 5.2 44 462-507 8-53 (264)
167 PRK08306 dipicolinate synthase 92.6 0.43 9.3E-06 50.7 8.2 77 462-541 151-241 (296)
168 PRK12549 shikimate 5-dehydroge 92.5 0.23 4.9E-06 52.4 6.1 61 445-508 109-172 (284)
169 COG2910 Putative NADH-flavin r 92.5 0.31 6.6E-06 48.9 6.5 131 465-597 2-201 (211)
170 PRK06113 7-alpha-hydroxysteroi 92.5 0.19 4.1E-06 50.7 5.2 44 462-507 10-55 (255)
171 PRK06484 short chain dehydroge 92.4 0.21 4.5E-06 56.0 5.9 45 462-508 268-314 (520)
172 PRK08642 fabG 3-ketoacyl-(acyl 92.4 0.22 4.7E-06 49.7 5.4 44 463-508 5-51 (253)
173 PRK14188 bifunctional 5,10-met 92.3 0.19 4.1E-06 53.6 5.1 142 393-541 44-230 (296)
174 TIGR01500 sepiapter_red sepiap 92.3 0.17 3.7E-06 51.2 4.7 43 465-509 2-50 (256)
175 COG0169 AroE Shikimate 5-dehyd 92.2 0.18 4E-06 53.4 4.9 94 402-509 73-172 (283)
176 PLN02730 enoyl-[acyl-carrier-p 92.2 0.17 3.8E-06 53.8 4.8 47 462-508 8-55 (303)
177 PRK12743 oxidoreductase; Provi 92.2 0.2 4.2E-06 50.7 4.9 43 464-508 3-48 (256)
178 TIGR02992 ectoine_eutC ectoine 92.2 0.32 7E-06 52.2 6.8 96 443-541 100-224 (326)
179 PRK06841 short chain dehydroge 92.2 0.24 5.1E-06 49.7 5.5 36 462-499 14-51 (255)
180 PRK14190 bifunctional 5,10-met 92.1 0.36 7.7E-06 51.3 6.9 154 393-554 44-245 (284)
181 TIGR01832 kduD 2-deoxy-D-gluco 92.1 0.2 4.4E-06 50.0 4.8 30 463-494 5-34 (248)
182 TIGR02685 pter_reduc_Leis pter 92.1 0.21 4.5E-06 50.9 5.0 44 464-509 2-48 (267)
183 PRK08291 ectoine utilization p 92.0 0.31 6.8E-06 52.3 6.4 78 460-540 129-226 (330)
184 PRK08690 enoyl-(acyl carrier p 92.0 0.23 5E-06 50.7 5.2 32 463-494 6-37 (261)
185 PF02719 Polysacc_synt_2: Poly 92.0 0.18 3.9E-06 53.6 4.5 42 466-509 1-45 (293)
186 PRK07069 short chain dehydroge 91.9 0.19 4.2E-06 50.0 4.5 42 466-509 2-46 (251)
187 PRK08219 short chain dehydroge 91.9 0.22 4.7E-06 48.8 4.7 41 464-507 4-46 (227)
188 PRK08628 short chain dehydroge 91.9 0.23 5E-06 50.0 5.0 42 462-506 6-49 (258)
189 PRK06179 short chain dehydroge 91.8 0.19 4.2E-06 51.0 4.4 35 464-500 5-41 (270)
190 CHL00194 ycf39 Ycf39; Provisio 91.8 0.22 4.7E-06 52.5 4.9 37 465-503 2-40 (317)
191 PRK08594 enoyl-(acyl carrier p 91.8 0.26 5.6E-06 50.3 5.2 44 463-508 7-57 (257)
192 PRK12747 short chain dehydroge 91.8 0.23 4.9E-06 49.9 4.7 44 463-508 4-50 (252)
193 PRK12937 short chain dehydroge 91.7 0.25 5.5E-06 49.0 5.0 43 463-507 5-50 (245)
194 PRK07041 short chain dehydroge 91.7 0.2 4.4E-06 49.4 4.3 40 467-508 1-42 (230)
195 PRK08217 fabG 3-ketoacyl-(acyl 91.7 0.25 5.3E-06 49.1 4.9 44 463-508 5-50 (253)
196 PLN02896 cinnamyl-alcohol dehy 91.6 0.28 6.1E-06 52.3 5.6 44 458-503 5-50 (353)
197 PRK07889 enoyl-(acyl carrier p 91.5 0.31 6.7E-06 49.6 5.5 45 463-509 7-57 (256)
198 PRK00676 hemA glutamyl-tRNA re 91.5 0.27 5.9E-06 53.3 5.3 139 395-546 110-265 (338)
199 PRK08303 short chain dehydroge 91.5 0.23 5E-06 52.5 4.6 44 463-508 8-63 (305)
200 PRK06123 short chain dehydroge 91.4 0.27 5.9E-06 49.0 4.9 42 464-507 3-47 (248)
201 PRK06463 fabG 3-ketoacyl-(acyl 91.4 0.29 6.3E-06 49.3 5.2 41 463-505 7-50 (255)
202 PRK06997 enoyl-(acyl carrier p 91.4 0.28 6.1E-06 50.2 5.1 45 463-507 6-55 (260)
203 PRK05565 fabG 3-ketoacyl-(acyl 91.4 0.27 5.9E-06 48.6 4.8 43 463-507 5-50 (247)
204 PRK07985 oxidoreductase; Provi 91.4 0.24 5.3E-06 51.7 4.7 43 463-507 49-95 (294)
205 PRK06505 enoyl-(acyl carrier p 91.4 0.32 6.8E-06 50.2 5.4 35 463-497 7-43 (271)
206 PRK12935 acetoacetyl-CoA reduc 91.4 0.28 6E-06 49.0 4.9 44 463-508 6-52 (247)
207 PRK14185 bifunctional 5,10-met 91.2 0.79 1.7E-05 48.9 8.3 142 392-541 42-233 (293)
208 PRK11199 tyrA bifunctional cho 91.2 0.44 9.6E-06 52.2 6.7 82 457-543 92-177 (374)
209 PRK08936 glucose-1-dehydrogena 91.2 0.29 6.4E-06 49.5 5.0 43 463-507 7-52 (261)
210 TIGR03649 ergot_EASG ergot alk 91.1 0.19 4E-06 51.8 3.5 33 465-499 1-35 (285)
211 PRK12823 benD 1,6-dihydroxycyc 91.0 0.3 6.4E-06 49.2 4.8 42 463-507 8-51 (260)
212 PRK09134 short chain dehydroge 90.9 0.38 8.1E-06 48.6 5.4 44 462-507 8-54 (258)
213 PRK06484 short chain dehydroge 90.9 0.39 8.4E-06 53.9 6.0 45 463-509 5-51 (520)
214 PRK09730 putative NAD(P)-bindi 90.9 0.32 6.9E-06 48.2 4.8 42 464-507 2-46 (247)
215 PLN02986 cinnamyl-alcohol dehy 90.9 0.31 6.7E-06 51.1 4.9 36 464-501 6-43 (322)
216 PRK07806 short chain dehydroge 90.8 0.34 7.3E-06 48.4 4.9 43 463-507 6-51 (248)
217 PRK06720 hypothetical protein; 90.7 0.4 8.6E-06 46.7 5.2 44 462-507 15-60 (169)
218 PRK06483 dihydromonapterin red 90.7 0.39 8.4E-06 47.8 5.2 35 463-499 2-38 (236)
219 PRK07577 short chain dehydroge 90.6 0.29 6.3E-06 48.3 4.1 33 464-498 4-38 (234)
220 PRK07856 short chain dehydroge 90.5 0.3 6.5E-06 49.1 4.3 35 463-499 6-42 (252)
221 PRK10792 bifunctional 5,10-met 90.5 0.31 6.8E-06 51.7 4.5 141 393-541 45-231 (285)
222 PRK12827 short chain dehydroge 90.5 0.39 8.4E-06 47.6 5.0 43 463-507 6-54 (249)
223 PLN02650 dihydroflavonol-4-red 90.4 0.34 7.4E-06 51.6 4.8 40 462-503 4-45 (351)
224 PRK06114 short chain dehydroge 90.4 0.4 8.6E-06 48.4 5.0 44 462-507 7-53 (254)
225 PRK12481 2-deoxy-D-gluconate 3 90.4 0.34 7.4E-06 49.0 4.5 31 462-494 7-37 (251)
226 PRK06198 short chain dehydroge 90.3 0.38 8.1E-06 48.4 4.8 43 463-507 6-51 (260)
227 PF03446 NAD_binding_2: NAD bi 90.3 0.68 1.5E-05 44.4 6.3 94 464-560 2-121 (163)
228 KOG0725 Reductases with broad 90.3 0.42 9E-06 50.1 5.2 45 462-508 7-53 (270)
229 PRK12745 3-ketoacyl-(acyl-carr 90.3 0.39 8.4E-06 48.1 4.8 29 464-494 3-31 (256)
230 PLN02686 cinnamoyl-CoA reducta 90.2 0.44 9.4E-06 51.7 5.4 41 461-503 51-93 (367)
231 PRK06079 enoyl-(acyl carrier p 90.1 0.44 9.6E-06 48.3 5.1 37 463-502 7-47 (252)
232 TIGR01831 fabG_rel 3-oxoacyl-( 90.1 0.32 7E-06 48.2 4.0 40 466-507 1-43 (239)
233 PLN00198 anthocyanidin reducta 90.1 0.43 9.2E-06 50.5 5.1 40 459-500 5-46 (338)
234 PRK05855 short chain dehydroge 90.1 0.39 8.4E-06 53.9 5.1 44 463-508 315-360 (582)
235 PF05368 NmrA: NmrA-like famil 90.1 0.42 9.1E-06 47.8 4.8 38 466-505 1-42 (233)
236 PRK08993 2-deoxy-D-gluconate 3 90.0 0.36 7.7E-06 48.8 4.3 32 461-494 8-39 (253)
237 PRK07023 short chain dehydroge 90.0 0.33 7.1E-06 48.5 4.0 33 464-498 2-36 (243)
238 PRK08159 enoyl-(acyl carrier p 90.0 0.49 1.1E-05 48.8 5.4 46 463-508 10-60 (272)
239 PRK14173 bifunctional 5,10-met 90.0 0.35 7.6E-06 51.4 4.3 141 393-541 41-227 (287)
240 TIGR02622 CDP_4_6_dhtase CDP-g 89.9 0.65 1.4E-05 49.5 6.4 37 464-502 5-43 (349)
241 PRK07792 fabG 3-ketoacyl-(acyl 89.8 0.5 1.1E-05 49.7 5.4 44 462-507 11-57 (306)
242 PRK06128 oxidoreductase; Provi 89.8 0.4 8.7E-06 50.0 4.6 30 463-494 55-84 (300)
243 PRK08415 enoyl-(acyl carrier p 89.8 0.49 1.1E-05 49.0 5.2 46 463-508 5-55 (274)
244 PRK07533 enoyl-(acyl carrier p 89.7 0.58 1.3E-05 47.6 5.6 46 462-507 9-59 (258)
245 PRK12938 acetyacetyl-CoA reduc 89.7 0.52 1.1E-05 47.0 5.1 30 463-494 3-32 (246)
246 PRK07201 short chain dehydroge 89.6 0.44 9.4E-06 55.1 5.2 43 463-507 371-415 (657)
247 PRK06523 short chain dehydroge 89.6 0.38 8.3E-06 48.4 4.2 34 463-498 9-44 (260)
248 PRK08226 short chain dehydroge 89.5 0.59 1.3E-05 47.2 5.4 34 463-498 6-41 (263)
249 PLN02583 cinnamoyl-CoA reducta 89.5 0.63 1.4E-05 48.6 5.8 33 462-496 5-39 (297)
250 PRK14180 bifunctional 5,10-met 89.5 0.61 1.3E-05 49.5 5.7 96 450-554 140-244 (282)
251 PRK07791 short chain dehydroge 89.4 0.52 1.1E-05 49.0 5.1 44 463-508 6-60 (286)
252 PLN02778 3,5-epimerase/4-reduc 89.3 0.56 1.2E-05 49.4 5.3 49 457-507 2-53 (298)
253 COG1748 LYS9 Saccharopine dehy 89.2 0.55 1.2E-05 51.9 5.3 76 464-542 2-100 (389)
254 PRK09496 trkA potassium transp 89.2 1 2.3E-05 49.6 7.6 45 460-507 228-274 (453)
255 PRK07424 bifunctional sterol d 89.2 0.53 1.2E-05 52.3 5.2 37 463-501 178-216 (406)
256 PRK06077 fabG 3-ketoacyl-(acyl 89.2 0.53 1.1E-05 46.9 4.8 30 463-494 6-35 (252)
257 PRK06398 aldose dehydrogenase; 89.1 0.43 9.3E-06 48.5 4.1 34 463-498 6-41 (258)
258 PRK08278 short chain dehydroge 89.1 0.49 1.1E-05 48.6 4.6 34 463-498 6-41 (273)
259 TIGR01829 AcAcCoA_reduct aceto 89.0 0.65 1.4E-05 45.9 5.2 41 464-506 1-44 (242)
260 PRK06603 enoyl-(acyl carrier p 89.0 0.62 1.3E-05 47.5 5.2 33 464-496 9-43 (260)
261 PRK14191 bifunctional 5,10-met 88.9 0.62 1.3E-05 49.5 5.2 142 393-541 43-229 (285)
262 TIGR03589 PseB UDP-N-acetylglu 88.8 0.61 1.3E-05 49.4 5.2 41 464-506 5-49 (324)
263 PF01210 NAD_Gly3P_dh_N: NAD-d 88.7 0.72 1.6E-05 44.1 5.1 39 465-506 1-41 (157)
264 PRK14183 bifunctional 5,10-met 88.7 0.8 1.7E-05 48.6 5.8 153 394-554 44-244 (281)
265 PRK14170 bifunctional 5,10-met 88.7 0.46 1E-05 50.4 4.1 155 392-554 42-244 (284)
266 PLN02662 cinnamyl-alcohol dehy 88.7 0.5 1.1E-05 49.2 4.4 34 464-499 5-40 (322)
267 PRK14176 bifunctional 5,10-met 88.6 0.52 1.1E-05 50.1 4.4 83 451-541 147-236 (287)
268 PF02737 3HCDH_N: 3-hydroxyacy 88.6 0.61 1.3E-05 45.9 4.7 42 465-509 1-44 (180)
269 PRK12749 quinate/shikimate deh 88.6 0.62 1.3E-05 49.4 5.0 105 383-509 63-173 (288)
270 PRK06171 sorbitol-6-phosphate 88.3 0.51 1.1E-05 47.8 4.0 35 463-499 9-45 (266)
271 PLN03154 putative allyl alcoho 88.2 1.9 4.1E-05 46.2 8.5 60 448-509 142-205 (348)
272 TIGR01472 gmd GDP-mannose 4,6- 88.2 1.1 2.4E-05 47.5 6.6 32 464-497 1-34 (343)
273 PRK12744 short chain dehydroge 88.1 0.65 1.4E-05 46.8 4.7 30 463-494 8-37 (257)
274 PRK06940 short chain dehydroge 88.1 0.7 1.5E-05 47.7 4.9 41 464-508 3-45 (275)
275 PRK12859 3-ketoacyl-(acyl-carr 88.1 0.67 1.5E-05 47.0 4.7 32 463-494 6-37 (256)
276 PRK06701 short chain dehydroge 88.0 0.7 1.5E-05 48.2 4.9 43 463-507 46-91 (290)
277 PRK07370 enoyl-(acyl carrier p 87.9 0.67 1.4E-05 47.3 4.6 32 463-494 6-37 (258)
278 PRK05476 S-adenosyl-L-homocyst 87.8 5 0.00011 45.0 11.7 134 460-597 209-373 (425)
279 TIGR02632 RhaD_aldol-ADH rhamn 87.8 0.64 1.4E-05 54.8 5.0 44 463-508 414-459 (676)
280 PRK14172 bifunctional 5,10-met 87.6 0.94 2E-05 48.0 5.5 95 451-554 141-244 (278)
281 TIGR01035 hemA glutamyl-tRNA r 87.5 1.5 3.3E-05 48.8 7.4 144 462-617 179-358 (417)
282 TIGR00518 alaDH alanine dehydr 87.5 2.2 4.9E-05 46.7 8.7 79 463-545 167-270 (370)
283 PRK07984 enoyl-(acyl carrier p 87.4 0.79 1.7E-05 47.2 4.9 31 464-494 7-37 (262)
284 PLN02989 cinnamyl-alcohol dehy 87.4 0.72 1.6E-05 48.3 4.6 36 463-500 5-42 (325)
285 PRK08309 short chain dehydroge 87.4 0.78 1.7E-05 45.1 4.5 41 465-508 2-44 (177)
286 PRK14182 bifunctional 5,10-met 87.4 1 2.2E-05 47.8 5.7 153 394-554 43-244 (282)
287 PRK14178 bifunctional 5,10-met 87.4 0.82 1.8E-05 48.4 5.0 141 393-541 38-224 (279)
288 KOG1502 Flavonol reductase/cin 87.3 0.66 1.4E-05 50.1 4.3 39 462-502 5-45 (327)
289 PRK14027 quinate/shikimate deh 87.3 1.1 2.5E-05 47.3 6.0 62 445-509 109-173 (283)
290 PLN02897 tetrahydrofolate dehy 87.1 1.5 3.3E-05 47.7 6.9 84 450-541 196-286 (345)
291 TIGR01915 npdG NADPH-dependent 87.0 1 2.2E-05 45.4 5.2 40 465-506 2-43 (219)
292 PF00670 AdoHcyase_NAD: S-aden 86.9 1.8 3.8E-05 42.5 6.6 80 462-544 22-113 (162)
293 PLN02695 GDP-D-mannose-3',5'-e 86.8 0.75 1.6E-05 49.9 4.5 31 462-494 20-50 (370)
294 PLN02657 3,8-divinyl protochlo 86.8 0.64 1.4E-05 51.0 4.0 41 456-498 53-95 (390)
295 COG2085 Predicted dinucleotide 86.7 1.8 3.9E-05 44.1 6.8 141 466-623 3-176 (211)
296 PLN02775 Probable dihydrodipic 86.6 1.2 2.6E-05 47.3 5.7 120 460-583 8-145 (286)
297 TIGR01830 3oxo_ACP_reduc 3-oxo 86.5 0.79 1.7E-05 45.1 4.1 40 466-507 1-43 (239)
298 PRK14193 bifunctional 5,10-met 86.5 1.2 2.6E-05 47.4 5.6 153 393-553 44-246 (284)
299 PRK12824 acetoacetyl-CoA reduc 86.5 1.1 2.3E-05 44.4 5.1 29 464-494 3-31 (245)
300 PRK12748 3-ketoacyl-(acyl-carr 86.4 0.93 2E-05 45.7 4.6 32 463-494 5-36 (256)
301 PRK14169 bifunctional 5,10-met 86.3 0.77 1.7E-05 48.7 4.1 141 393-541 42-228 (282)
302 PRK08324 short chain dehydroge 86.2 1 2.2E-05 53.0 5.5 45 463-509 422-468 (681)
303 KOG1371 UDP-glucose 4-epimeras 86.2 1.5 3.3E-05 47.4 6.2 77 463-541 2-85 (343)
304 PRK14177 bifunctional 5,10-met 86.2 0.77 1.7E-05 48.8 4.0 84 450-541 141-231 (284)
305 PRK14168 bifunctional 5,10-met 86.1 0.82 1.8E-05 48.9 4.2 85 450-541 143-237 (297)
306 PRK14181 bifunctional 5,10-met 86.1 1.3 2.7E-05 47.2 5.6 140 394-541 39-229 (287)
307 PRK08655 prephenate dehydrogen 85.9 1.7 3.7E-05 48.6 6.8 75 465-541 2-92 (437)
308 PRK14171 bifunctional 5,10-met 85.9 1.3 2.9E-05 47.1 5.6 97 449-554 140-246 (288)
309 TIGR01809 Shik-DH-AROM shikima 85.8 1.3 2.7E-05 46.7 5.4 61 445-508 105-170 (282)
310 PLN02214 cinnamoyl-CoA reducta 85.8 0.95 2.1E-05 48.4 4.6 35 463-499 10-46 (342)
311 PLN02520 bifunctional 3-dehydr 85.7 1.4 3E-05 50.7 6.1 43 462-507 378-422 (529)
312 PRK14186 bifunctional 5,10-met 85.7 0.88 1.9E-05 48.6 4.2 140 394-541 45-230 (297)
313 PLN00015 protochlorophyllide r 85.7 0.86 1.9E-05 47.8 4.1 40 467-508 1-43 (308)
314 PRK14874 aspartate-semialdehyd 85.7 0.84 1.8E-05 49.2 4.1 119 465-597 3-142 (334)
315 PLN02516 methylenetetrahydrofo 85.6 0.94 2E-05 48.5 4.3 84 450-541 149-239 (299)
316 PRK06550 fabG 3-ketoacyl-(acyl 85.5 0.9 1.9E-05 44.9 3.9 30 463-494 5-34 (235)
317 PRK14166 bifunctional 5,10-met 85.4 0.95 2.1E-05 48.0 4.2 153 393-554 42-244 (282)
318 PLN02427 UDP-apiose/xylose syn 85.4 1 2.2E-05 48.7 4.6 42 459-502 10-54 (386)
319 PRK08261 fabG 3-ketoacyl-(acyl 85.3 1.4 3.1E-05 48.7 5.8 45 462-508 209-257 (450)
320 PRK08220 2,3-dihydroxybenzoate 85.2 1.1 2.4E-05 44.7 4.4 30 463-494 8-37 (252)
321 PRK12367 short chain dehydroge 85.0 1.2 2.5E-05 45.6 4.6 33 463-497 14-48 (245)
322 TIGR01777 yfcH conserved hypot 85.0 0.72 1.6E-05 46.9 3.1 32 466-499 1-34 (292)
323 PF13561 adh_short_C2: Enoyl-( 85.0 1 2.2E-05 45.2 4.1 39 470-508 1-45 (241)
324 PLN02616 tetrahydrofolate dehy 84.6 0.93 2E-05 49.6 3.8 142 392-541 114-303 (364)
325 PRK14184 bifunctional 5,10-met 84.6 2.1 4.5E-05 45.6 6.3 141 394-541 44-233 (286)
326 COG1028 FabG Dehydrogenases wi 84.5 1.6 3.5E-05 43.6 5.3 45 462-508 4-52 (251)
327 PRK14187 bifunctional 5,10-met 84.3 1.1 2.4E-05 47.9 4.1 140 394-541 45-232 (294)
328 KOG1210 Predicted 3-ketosphing 84.0 2.4 5.2E-05 45.7 6.4 62 450-513 20-83 (331)
329 cd05191 NAD_bind_amino_acid_DH 84.0 2.3 4.9E-05 36.6 5.2 61 462-541 22-86 (86)
330 cd08294 leukotriene_B4_DH_like 83.9 4.2 9E-05 42.2 8.2 55 449-505 128-186 (329)
331 COG3268 Uncharacterized conser 83.8 1 2.3E-05 48.7 3.7 48 463-512 6-55 (382)
332 COG3967 DltE Short-chain dehyd 83.8 1.7 3.8E-05 44.4 5.0 44 464-509 6-51 (245)
333 PRK07417 arogenate dehydrogena 83.8 2.7 5.9E-05 43.9 6.8 77 465-544 2-94 (279)
334 PF01370 Epimerase: NAD depend 83.7 1.7 3.8E-05 42.6 5.0 27 466-494 1-27 (236)
335 TIGR03466 HpnA hopanoid-associ 83.6 0.92 2E-05 47.0 3.2 33 465-499 2-36 (328)
336 PRK14174 bifunctional 5,10-met 83.6 1.5 3.3E-05 46.8 4.9 140 394-541 44-235 (295)
337 KOG2380 Prephenate dehydrogena 83.5 2.4 5.2E-05 46.2 6.2 138 424-564 10-173 (480)
338 TIGR01746 Thioester-redct thio 83.3 1.4 3E-05 46.1 4.4 32 465-498 1-36 (367)
339 PRK11863 N-acetyl-gamma-glutam 83.2 1.7 3.7E-05 46.8 5.0 119 464-596 3-128 (313)
340 PF03807 F420_oxidored: NADP o 83.1 2.7 5.8E-05 36.1 5.4 42 465-509 1-48 (96)
341 PRK06300 enoyl-(acyl carrier p 83.1 1.9 4.1E-05 45.8 5.3 33 462-494 7-39 (299)
342 PRK07066 3-hydroxybutyryl-CoA 82.5 3.3 7.2E-05 44.7 6.9 41 462-505 6-48 (321)
343 cd08289 MDR_yhfp_like Yhfp put 82.4 3 6.4E-05 43.2 6.4 54 450-505 129-189 (326)
344 PF03435 Saccharop_dh: Sacchar 82.3 1.8 3.8E-05 47.1 4.9 39 466-507 1-43 (386)
345 PRK14167 bifunctional 5,10-met 82.1 1.5 3.3E-05 46.9 4.1 140 394-541 44-233 (297)
346 PRK00436 argC N-acetyl-gamma-g 82.1 2.5 5.5E-05 45.8 5.9 29 464-494 3-32 (343)
347 PLN02653 GDP-mannose 4,6-dehyd 82.0 1.5 3.2E-05 46.4 4.1 30 463-494 6-35 (340)
348 PLN02383 aspartate semialdehyd 81.8 2.2 4.9E-05 46.4 5.4 126 462-597 6-152 (344)
349 smart00822 PKS_KR This enzymat 81.3 1.7 3.7E-05 39.8 3.7 34 464-499 1-37 (180)
350 PLN00016 RNA-binding protein; 81.2 1.5 3.3E-05 47.4 3.9 37 460-498 49-91 (378)
351 TIGR00561 pntA NAD(P) transhyd 81.1 2.8 6E-05 48.1 6.0 89 405-505 103-205 (511)
352 cd05276 p53_inducible_oxidored 81.1 4.7 0.0001 40.8 7.2 41 462-504 139-181 (323)
353 smart00859 Semialdhyde_dh Semi 81.1 5.8 0.00013 35.9 7.1 28 465-494 1-29 (122)
354 COG2130 Putative NADP-dependen 81.1 5.6 0.00012 42.9 7.8 138 362-538 81-223 (340)
355 COG0451 WcaG Nucleoside-diphos 81.0 1.6 3.4E-05 44.9 3.7 28 465-494 2-29 (314)
356 cd01079 NAD_bind_m-THF_DH NAD 80.8 2.6 5.7E-05 42.5 5.0 80 460-541 59-156 (197)
357 cd08270 MDR4 Medium chain dehy 80.8 5.7 0.00012 40.6 7.7 42 462-505 132-175 (305)
358 cd08253 zeta_crystallin Zeta-c 80.7 5.9 0.00013 40.2 7.8 40 463-504 145-186 (325)
359 PLN02494 adenosylhomocysteinas 80.7 18 0.00038 41.3 12.1 152 442-598 232-418 (477)
360 PRK09310 aroDE bifunctional 3- 80.6 3 6.5E-05 47.3 6.1 60 445-507 314-375 (477)
361 TIGR01505 tartro_sem_red 2-hyd 80.6 4.6 9.9E-05 42.2 7.1 77 466-545 2-97 (291)
362 PRK10675 UDP-galactose-4-epime 80.4 1.8 3.8E-05 45.5 3.9 28 465-494 2-29 (338)
363 TIGR01296 asd_B aspartate-semi 80.4 1.1 2.3E-05 48.7 2.3 120 465-598 1-141 (339)
364 PTZ00075 Adenosylhomocysteinas 80.2 8 0.00017 44.1 9.2 136 461-600 252-419 (476)
365 cd00401 AdoHcyase S-adenosyl-L 80.1 12 0.00027 41.8 10.6 97 442-542 180-290 (413)
366 KOG1196 Predicted NAD-dependen 79.7 6.1 0.00013 42.6 7.5 68 442-511 131-202 (343)
367 cd08295 double_bond_reductase_ 79.6 4.5 9.8E-05 42.6 6.7 58 450-509 137-198 (338)
368 PRK08125 bifunctional UDP-gluc 79.2 4 8.7E-05 47.9 6.7 31 462-494 314-345 (660)
369 KOG1370 S-adenosylhomocysteine 79.2 6.2 0.00013 42.6 7.4 144 463-611 214-395 (434)
370 TIGR01179 galE UDP-glucose-4-e 79.0 1.9 4.1E-05 44.3 3.6 28 465-494 1-28 (328)
371 KOG1203 Predicted dehydrogenas 79.0 2.5 5.4E-05 47.2 4.6 62 442-505 57-121 (411)
372 PRK15461 NADH-dependent gamma- 78.7 5.3 0.00011 42.2 6.9 96 465-563 3-125 (296)
373 KOG1200 Mitochondrial/plastidi 78.7 3.4 7.3E-05 42.1 5.0 45 463-509 14-60 (256)
374 PRK11908 NAD-dependent epimera 78.6 2.7 5.8E-05 44.7 4.7 36 464-501 2-40 (347)
375 cd08243 quinone_oxidoreductase 78.6 7.4 0.00016 39.8 7.8 53 450-504 128-184 (320)
376 PRK10217 dTDP-glucose 4,6-dehy 78.6 2 4.2E-05 45.6 3.6 28 464-493 2-29 (355)
377 PLN02166 dTDP-glucose 4,6-dehy 78.4 2.5 5.4E-05 47.3 4.5 31 462-494 119-149 (436)
378 PLN02206 UDP-glucuronate decar 78.4 2.4 5.1E-05 47.6 4.3 30 463-494 119-148 (442)
379 PTZ00354 alcohol dehydrogenase 78.4 7.4 0.00016 40.2 7.7 42 462-505 140-183 (334)
380 cd05280 MDR_yhdh_yhfp Yhdh and 78.2 8.7 0.00019 39.6 8.2 40 463-504 147-188 (325)
381 PLN02572 UDP-sulfoquinovose sy 78.0 2.2 4.9E-05 47.6 4.0 30 463-494 47-76 (442)
382 PF01262 AlaDh_PNT_C: Alanine 77.8 7.4 0.00016 37.6 7.1 40 463-505 20-61 (168)
383 PRK11150 rfaD ADP-L-glycero-D- 77.7 2.1 4.6E-05 44.5 3.5 27 466-494 2-28 (308)
384 PRK15181 Vi polysaccharide bio 77.6 2.7 5.9E-05 44.9 4.4 31 462-494 14-44 (348)
385 PRK14618 NAD(P)H-dependent gly 77.6 6.2 0.00013 42.0 7.1 40 464-506 5-46 (328)
386 PLN02240 UDP-glucose 4-epimera 77.5 2.5 5.5E-05 44.6 4.1 29 464-494 6-34 (352)
387 COG0287 TyrA Prephenate dehydr 77.5 6.3 0.00014 41.8 6.9 29 463-494 3-31 (279)
388 TIGR00936 ahcY adenosylhomocys 77.4 24 0.00052 39.5 11.7 152 442-598 173-357 (406)
389 PF02254 TrkA_N: TrkA-N domain 77.2 4.5 9.7E-05 35.9 5.0 39 466-507 1-41 (116)
390 PRK06035 3-hydroxyacyl-CoA deh 76.9 3.4 7.3E-05 43.3 4.7 38 464-504 4-43 (291)
391 PRK09009 C factor cell-cell si 76.6 3 6.4E-05 41.3 4.0 28 465-494 2-31 (235)
392 PRK08040 putative semialdehyde 76.4 3.2 7E-05 45.1 4.5 118 463-597 4-145 (336)
393 PRK00066 ldh L-lactate dehydro 76.3 3.9 8.6E-05 43.8 5.1 45 462-509 5-53 (315)
394 PRK10669 putative cation:proto 76.3 2.8 6.1E-05 48.1 4.3 41 463-506 417-459 (558)
395 cd08241 QOR1 Quinone oxidoredu 76.2 8.9 0.00019 38.9 7.5 41 462-504 139-181 (323)
396 cd05288 PGDH Prostaglandin deh 76.2 6.8 0.00015 40.6 6.8 44 463-508 146-191 (329)
397 TIGR01181 dTDP_gluc_dehyt dTDP 76.1 2.4 5.3E-05 43.4 3.4 28 465-494 1-30 (317)
398 TIGR01214 rmlD dTDP-4-dehydror 76.1 2.7 5.8E-05 43.0 3.7 28 465-494 1-28 (287)
399 KOG1201 Hydroxysteroid 17-beta 76.0 6.1 0.00013 42.4 6.3 44 463-508 38-83 (300)
400 PF10727 Rossmann-like: Rossma 76.0 5.1 0.00011 37.6 5.2 45 463-510 10-57 (127)
401 PRK07530 3-hydroxybutyryl-CoA 75.9 3.8 8.3E-05 42.9 4.8 39 464-505 5-45 (292)
402 cd08259 Zn_ADH5 Alcohol dehydr 75.6 7.1 0.00015 40.3 6.7 41 462-504 162-204 (332)
403 PRK11559 garR tartronate semia 75.5 8.8 0.00019 40.1 7.4 80 464-546 3-101 (296)
404 cd08293 PTGR2 Prostaglandin re 75.5 7.5 0.00016 40.8 6.9 44 464-509 156-202 (345)
405 cd01075 NAD_bind_Leu_Phe_Val_D 75.4 4.8 0.0001 40.3 5.2 43 462-507 27-71 (200)
406 PRK08293 3-hydroxybutyryl-CoA 75.2 4.5 9.8E-05 42.4 5.1 40 464-506 4-45 (287)
407 cd05195 enoyl_red enoyl reduct 74.6 11 0.00024 37.3 7.5 41 462-504 108-150 (293)
408 PRK11064 wecC UDP-N-acetyl-D-m 74.5 10 0.00022 42.3 7.9 39 464-505 4-44 (415)
409 PRK09260 3-hydroxybutyryl-CoA 74.4 4.5 9.7E-05 42.3 4.9 40 464-506 2-43 (288)
410 cd08268 MDR2 Medium chain dehy 74.3 13 0.00028 37.9 8.1 40 463-504 145-186 (328)
411 cd03514 CrtR_beta-carotene-hyd 74.0 27 0.00058 35.2 10.1 22 239-260 167-188 (207)
412 TIGR02825 B4_12hDH leukotriene 73.9 7.6 0.00016 40.6 6.5 42 462-505 138-181 (325)
413 PRK06129 3-hydroxyacyl-CoA deh 73.8 4.8 0.0001 42.6 5.0 38 464-504 3-42 (308)
414 PRK09496 trkA potassium transp 73.7 4.4 9.6E-05 44.7 4.9 38 465-505 2-41 (453)
415 COG0190 FolD 5,10-methylene-te 73.7 4.9 0.00011 42.7 4.9 83 451-541 139-228 (283)
416 PRK07819 3-hydroxybutyryl-CoA 73.4 4.6 9.9E-05 42.6 4.7 39 463-504 5-45 (286)
417 PF02558 ApbA: Ketopantoate re 73.4 5.3 0.00011 37.1 4.6 37 466-506 1-39 (151)
418 PRK07578 short chain dehydroge 72.8 4 8.6E-05 39.6 3.8 27 465-494 2-28 (199)
419 PRK06598 aspartate-semialdehyd 72.7 3.5 7.5E-05 45.5 3.7 121 465-598 3-149 (369)
420 PRK13656 trans-2-enoyl-CoA red 72.4 5.6 0.00012 44.3 5.1 41 451-494 20-71 (398)
421 PRK06522 2-dehydropantoate 2-r 72.1 5.7 0.00012 41.2 5.0 39 465-506 2-42 (304)
422 PRK09987 dTDP-4-dehydrorhamnos 72.0 3.6 7.8E-05 43.1 3.5 27 465-494 2-28 (299)
423 PRK07364 2-octaprenyl-6-methox 71.9 3 6.5E-05 45.3 2.9 30 462-494 17-46 (415)
424 KOG1207 Diacetyl reductase/L-x 71.8 6 0.00013 39.7 4.6 44 464-509 8-53 (245)
425 PF04321 RmlD_sub_bind: RmlD s 71.7 4.5 9.7E-05 42.4 4.1 28 465-494 2-29 (286)
426 TIGR02197 heptose_epim ADP-L-g 71.6 3.8 8.2E-05 42.3 3.5 27 466-494 1-28 (314)
427 PRK13771 putative alcohol dehy 71.6 13 0.00029 38.7 7.7 54 450-505 149-205 (334)
428 PF01113 DapB_N: Dihydrodipico 71.2 6.4 0.00014 36.2 4.6 28 465-494 2-30 (124)
429 cd05282 ETR_like 2-enoyl thioe 71.0 14 0.00031 37.9 7.7 42 461-504 137-180 (323)
430 COG1090 Predicted nucleoside-d 71.0 3.5 7.6E-05 43.8 3.0 32 466-499 1-34 (297)
431 PF02826 2-Hacid_dh_C: D-isome 70.7 13 0.00029 36.1 6.9 77 462-541 35-127 (178)
432 cd05286 QOR2 Quinone oxidoredu 70.5 16 0.00035 36.8 7.8 40 463-504 137-178 (320)
433 TIGR02823 oxido_YhdH putative 70.1 11 0.00023 39.1 6.4 43 460-504 143-187 (323)
434 TIGR01850 argC N-acetyl-gamma- 70.0 8.5 0.00018 41.8 5.9 27 465-493 2-29 (346)
435 TIGR01851 argC_other N-acetyl- 69.9 6.7 0.00014 42.3 5.0 118 464-595 2-126 (310)
436 PF00056 Ldh_1_N: lactate/mala 69.8 7.9 0.00017 36.6 5.0 41 465-507 2-46 (141)
437 TIGR02130 dapB_plant dihydrodi 69.1 9.1 0.0002 40.6 5.7 28 465-494 2-29 (275)
438 cd08249 enoyl_reductase_like e 68.5 17 0.00036 38.5 7.6 42 461-504 153-195 (339)
439 TIGR02817 adh_fam_1 zinc-bindi 68.3 12 0.00027 38.9 6.5 40 463-504 149-191 (336)
440 COG0499 SAM1 S-adenosylhomocys 68.2 22 0.00049 39.3 8.4 162 443-610 188-388 (420)
441 cd08292 ETR_like_2 2-enoyl thi 68.1 15 0.00032 38.0 7.0 42 462-505 139-182 (324)
442 PRK03562 glutathione-regulated 68.0 6.6 0.00014 46.1 4.8 45 459-506 396-442 (621)
443 PRK06130 3-hydroxybutyryl-CoA 67.9 8.1 0.00018 40.7 5.1 40 464-506 5-46 (311)
444 PLN02545 3-hydroxybutyryl-CoA 67.9 7.3 0.00016 40.8 4.7 36 464-502 5-42 (295)
445 TIGR01751 crot-CoA-red crotony 67.9 12 0.00025 40.8 6.5 41 463-505 190-232 (398)
446 COG0569 TrkA K+ transport syst 67.9 7.6 0.00017 39.6 4.7 36 464-502 1-38 (225)
447 PRK05579 bifunctional phosphop 67.8 5.5 0.00012 44.3 3.9 96 373-494 116-233 (399)
448 cd05291 HicDH_like L-2-hydroxy 67.6 7.2 0.00016 41.4 4.6 41 464-507 1-45 (306)
449 PF03853 YjeF_N: YjeF-related 67.1 15 0.00032 35.8 6.3 39 454-494 15-57 (169)
450 PRK08268 3-hydroxy-acyl-CoA de 67.0 8.3 0.00018 44.2 5.3 39 462-503 6-46 (507)
451 PF00899 ThiF: ThiF family; I 66.8 6.1 0.00013 36.5 3.5 35 463-500 2-37 (135)
452 cd08250 Mgc45594_like Mgc45594 66.7 14 0.0003 38.4 6.5 41 462-504 139-181 (329)
453 PRK12475 thiamine/molybdopteri 66.4 7.1 0.00015 42.4 4.4 42 462-506 23-67 (338)
454 cd08288 MDR_yhdh Yhdh putative 66.3 16 0.00035 37.8 6.9 41 462-504 146-188 (324)
455 PF08659 KR: KR domain; Inter 66.3 11 0.00023 36.7 5.2 30 465-496 2-34 (181)
456 PRK01713 ornithine carbamoyltr 65.5 37 0.0008 37.0 9.6 107 386-498 53-190 (334)
457 cd05311 NAD_bind_2_malic_enz N 65.4 8.9 0.00019 39.2 4.6 32 462-496 24-60 (226)
458 KOG4169 15-hydroxyprostaglandi 65.3 6.9 0.00015 40.7 3.7 30 463-494 5-34 (261)
459 PLN03139 formate dehydrogenase 65.2 6.1 0.00013 43.8 3.6 86 406-494 140-227 (386)
460 KOG1298 Squalene monooxygenase 65.0 8.6 0.00019 42.8 4.6 45 459-506 41-87 (509)
461 cd05284 arabinose_DH_like D-ar 64.9 18 0.00039 37.8 6.9 52 450-504 152-209 (340)
462 smart00829 PKS_ER Enoylreducta 64.8 18 0.0004 35.8 6.7 40 463-504 105-146 (288)
463 PLN02260 probable rhamnose bio 64.8 8.2 0.00018 45.2 4.8 30 463-494 380-409 (668)
464 TIGR02824 quinone_pig3 putativ 64.2 18 0.00039 36.7 6.7 40 462-503 139-180 (325)
465 cd03510 Rhizobitoxine-FADS-lik 64.2 25 0.00053 34.5 7.3 16 154-169 71-86 (175)
466 COG0623 FabI Enoyl-[acyl-carri 64.2 20 0.00044 37.4 6.8 54 463-516 6-60 (259)
467 COG0604 Qor NADPH:quinone redu 64.0 15 0.00032 39.6 6.2 98 408-511 80-190 (326)
468 cd08266 Zn_ADH_like1 Alcohol d 63.9 20 0.00043 36.8 7.0 41 462-504 166-208 (342)
469 PRK14620 NAD(P)H-dependent gly 63.8 10 0.00023 40.2 5.0 38 465-505 2-41 (326)
470 PRK10084 dTDP-glucose 4,6 dehy 63.6 6.6 0.00014 41.6 3.5 27 465-493 2-28 (352)
471 COG0686 Ald Alanine dehydrogen 63.5 10 0.00023 41.1 4.8 74 463-541 168-268 (371)
472 KOG3011 Ubiquitin-conjugating 63.4 8.3 0.00018 40.2 3.9 134 128-271 109-260 (293)
473 cd08244 MDR_enoyl_red Possible 63.1 20 0.00043 36.9 6.8 41 462-504 142-184 (324)
474 TIGR00658 orni_carb_tr ornithi 63.0 44 0.00096 35.8 9.6 106 386-498 46-181 (304)
475 PRK15057 UDP-glucose 6-dehydro 63.0 12 0.00027 41.3 5.5 37 465-505 2-40 (388)
476 cd08291 ETR_like_1 2-enoyl thi 62.5 18 0.00039 37.8 6.4 54 450-505 130-186 (324)
477 PRK08664 aspartate-semialdehyd 61.6 14 0.00031 40.0 5.7 29 464-494 4-33 (349)
478 PRK09424 pntA NAD(P) transhydr 61.4 19 0.0004 41.5 6.7 41 462-505 164-206 (509)
479 PRK00094 gpsA NAD(P)H-dependen 61.4 13 0.00027 39.1 5.1 39 465-506 3-43 (325)
480 cd08246 crotonyl_coA_red croto 61.1 20 0.00044 38.7 6.7 42 462-505 193-236 (393)
481 PRK12320 hypothetical protein; 61.0 9.2 0.0002 45.6 4.3 28 465-494 2-29 (699)
482 KOG1600 Fatty acid desaturase 60.9 7.9 0.00017 41.7 3.3 22 89-110 34-55 (321)
483 PRK14106 murD UDP-N-acetylmura 60.7 12 0.00026 41.4 5.0 29 463-494 5-33 (450)
484 PRK00779 ornithine carbamoyltr 60.6 33 0.00071 36.8 8.0 93 405-499 64-186 (304)
485 TIGR03366 HpnZ_proposed putati 60.5 21 0.00046 36.7 6.5 41 462-505 120-163 (280)
486 KOG0068 D-3-phosphoglycerate d 60.3 42 0.00092 36.9 8.6 128 402-541 62-236 (406)
487 TIGR03201 dearomat_had 6-hydro 60.1 22 0.00047 37.9 6.6 41 462-505 166-208 (349)
488 PRK12921 2-dehydropantoate 2-r 60.1 12 0.00026 38.9 4.6 38 465-506 2-41 (305)
489 PRK07688 thiamine/molybdopteri 59.8 9.7 0.00021 41.4 3.9 30 462-494 23-53 (339)
490 PRK13243 glyoxylate reductase; 59.8 25 0.00054 38.0 7.1 77 462-541 149-240 (333)
491 PRK06728 aspartate-semialdehyd 59.8 11 0.00024 41.2 4.4 120 464-598 6-146 (347)
492 cd05294 LDH-like_MDH_nadp A la 59.6 8.3 0.00018 41.2 3.3 28 465-494 2-31 (309)
493 cd08297 CAD3 Cinnamyl alcohol 59.4 24 0.00053 36.9 6.8 53 450-504 152-207 (341)
494 cd00650 LDH_MDH_like NAD-depen 59.2 9.3 0.0002 39.5 3.5 40 466-507 1-46 (263)
495 PF01494 FAD_binding_3: FAD bi 59.0 11 0.00023 39.1 4.0 28 464-494 2-29 (356)
496 PRK05808 3-hydroxybutyryl-CoA 59.0 12 0.00027 38.9 4.5 35 464-501 4-40 (282)
497 cd08296 CAD_like Cinnamyl alco 58.9 24 0.00053 37.0 6.7 47 455-504 155-204 (333)
498 TIGR00715 precor6x_red precorr 58.8 7.2 0.00016 40.8 2.6 33 465-500 2-36 (256)
499 PLN02712 arogenate dehydrogena 58.6 28 0.00061 41.4 7.7 75 463-542 52-144 (667)
500 PRK11880 pyrroline-5-carboxyla 58.3 14 0.00031 37.8 4.8 39 465-506 4-47 (267)
No 1
>PLN02869 fatty aldehyde decarbonylase
Probab=100.00 E-value=1.7e-192 Score=1566.82 Aligned_cols=608 Identities=72% Similarity=1.270 Sum_probs=582.4
Q ss_pred CCCCCCCCCCCCCCCCCCcceEeehHHHhhhhhhhhcCccccccccchhHHHHHHHHHHHHhHHHHHhhchhhHhcCcCC
Q 006894 1 MASKPGILTEWPWKPLGSYKHVVLAPWAMHSIYCFIGSRKSERDYAYFLIFPFLLLRMLHDQIWISLSRYRTAKRNNRIV 80 (627)
Q Consensus 1 ~~~~~~~l~~wpw~~lg~~ky~~~~P~v~~~~~~~~~~~~~~~~~~~~~il~~~~lRyl~~~~wi~~~~~~~~~~k~kIq 80 (627)
||++||+||+|||++||||||++|+|+|+|++|++.++++++.|+.|++|++++++|++++|+|++++|++++++|+||+
T Consensus 1 ma~~pg~lt~wpW~~lG~~Ky~~~~p~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~l~~q~W~s~sr~~~~~~~~ri~ 80 (620)
T PLN02869 1 MASKPGILTDWPWKPLGSFKYVVLAPWVIHSIYSFVVKDEKERDLSYFLIFPFLLWRMLHNQLWISLSRYRTAKGNNRIV 80 (620)
T ss_pred CCCCCcccccCcccccCCeeeeeehHHHHHHHHHHHhcccccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhceeee
Confidence 99999999999999999999999999999999999988777777789999999999999999999999999999999999
Q ss_pred CCCccccchhhhhccchhhHHHHHHHHHHHhhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhcc
Q 006894 81 DKAIEFDQVDRERNWDDQIVFNGLIFYIVRMLIPPSYSNLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYH 160 (627)
Q Consensus 81 ~~~~~~~qvdrE~~~~n~iil~~li~~l~~~~~p~~~~~lP~W~~~gli~~lll~~l~~Df~~Yw~HRllH~~~ly~r~H 160 (627)
+|+++|+|+|||++||||+|+++++++++++.+| +.+++|.|++.|++..+++|+++.|++|||+||++|++++||++|
T Consensus 81 ~~~i~f~QvDre~~wDd~iil~~l~~~~~~~~~p-~~~~~P~W~~~g~l~~~Llhv~~~Df~fYW~HRllH~~~LYwr~H 159 (620)
T PLN02869 81 DKGIEFEQVDRERNWDDQILFNGILFYVGYMILP-GASHMPLWRTDGVLITILLHMGPVEFLYYWLHRALHHHYLYSRYH 159 (620)
T ss_pred ccCCCceeeccccccchHHHHHHHHHHHHHHhhh-hhhcCcccccchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 9999999999999999999999999999999999 789999999999999999999999999999999999999999999
Q ss_pred cCCCcCcCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhhcccCceecccccccccCCcc
Q 006894 161 SHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLK 240 (627)
Q Consensus 161 ~~HH~s~~p~~~ta~~~hplE~ll~~~l~~iPll~~~llg~~s~~~~~~y~i~~~~~~~~~Hsg~e~~P~~~~~~lp~L~ 240 (627)
++||++.+|+|+|+..+++.|++.+.+++.+|+++..+++..|+.++++|+++.++.++++|||+|++|+++++.+|+++
T Consensus 160 kvHHss~~~~P~Ts~~HP~~E~L~y~ll~~IPLllli~~g~~hi~t~~~yli~~~f~~~~gHSN~El~P~~~~~~~ppLk 239 (620)
T PLN02869 160 SHHHSSIVTEPITSVIHPFAEHIAYFLLFAIPLLTTIFTGTASIAAFFGYISYIDFMNNMGHCNFELIPKWLFSIFPPLK 239 (620)
T ss_pred hhccCCCCCCchhhhcCcHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHhcccccCccccccchhccCCcch
Confidence 99999999999998754445778777778899988777777789999999999999999999999999999988889999
Q ss_pred cccCChhhhhhhhcCCCCCcCCCchhhhhhcCCCCCCCchHHHHHhhcCCccccccCCCCceeeecccCCccccccccch
Q 006894 241 FLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYEKSLKRSGEEEEESADDVDVVHLTHLTTPESIYHLRIG 320 (627)
Q Consensus 241 ~li~tp~~H~lHH~~~~~NYG~~f~~WDrLFGT~~~~~~~~~~~~~~r~~~~~~~~~~~p~~v~l~h~~~~~s~~h~~~~ 320 (627)
|+++||++|++||+++++|||++|++||+||||+++++++++|+... +.++ +||||||||+||++|+||+|||
T Consensus 240 yll~TPsfHdlHHs~fd~NYGlfF~~WDrLFGT~d~~s~~l~e~~~~--~~~~-----~pd~V~l~H~t~~~s~~h~~~~ 312 (620)
T PLN02869 240 YLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTMDKSSDTLYEKSLK--RPEE-----IPDVVHLTHLTTPDSIYHLRLG 312 (620)
T ss_pred heecCchHHhHHhccCCcCcccchHHHHhccCCCCCCchhHHHHhhc--Cccc-----CCCEEEEeccCCHHHhhccchH
Confidence 99999999999999999999999999999999999999999999987 4344 9999999999999999999999
Q ss_pred hhhhccCCccccccCcchhhcchhhHHHHHHHHHHHHhcceEEEeecccCcceeeEEEEeccCcccccchhhHHHHHHHH
Q 006894 321 FASLASKPHRYTYTLSQWYLQLLWPFTASCSVLVSWIYGRTFVSESNTLDKLKLQTWVVPRYIVQYNLPWRREAINSLIE 400 (627)
Q Consensus 321 ~~~~~s~p~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~w~~pr~~~~y~~~~~~~~in~~Ie 400 (627)
|||+||+||+ ++||||||||+|+++|+++ |+|||||++|+|+|||+++|||+||||||||++|+++|+||++||
T Consensus 313 ~~s~as~p~~-----~~~~l~~~wp~~~~~m~~~-w~~~~~f~~~~~~~~~~~~~tw~vpr~~~qy~~~~~~~~in~~Ie 386 (620)
T PLN02869 313 FASLASKPYI-----SKWYLRLMWPVTSWSMMLT-WIYGRTFVLERNRFNKLNLQTWVIPKYKIQYLLKWQNESINSLIE 386 (620)
T ss_pred HHHhccCCcc-----chhHHHHHHHHHHHHHHHH-HHhCCceEeeeeeccceeeeEEEeccccccccCchhhhhHHHHHH
Confidence 9999999999 9999999999999999999 799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCcEEEecccccccccccCCceeEecCCCcccceeecCChhHHHHHHhcCCCCCcEEEEeccCCChhhHHH
Q 006894 401 EAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANA 480 (627)
Q Consensus 401 ~Ai~~A~~~G~kv~~LG~ln~~e~ln~~g~~~~~r~p~~L~irvv~Gnsltaavv~~~ip~~~~~V~l~Gatg~~kig~a 480 (627)
+||++|||+||||+|||+|||+|+|||+|++||+|||+ ||||||||||||||||+|+||++++|||++|||+ |||+|
T Consensus 387 ~ail~ad~~Gvkv~sLg~LNk~~~LN~~G~l~v~k~p~-L~vrvv~G~tLtaAvvln~ip~~~~~vfl~G~~s--K~~ra 463 (620)
T PLN02869 387 EAILEADKRGVKVLSLGLLNQGEELNRYGELYIHRNPK-LKIKVVDGSSLAVAVVLNSIPKGTTQVLFRGNLS--KVAYF 463 (620)
T ss_pred HHHHHHHhcCCEEEechhcchhhhhcCCceEeeecCCC-cceEEEeCCchHHHHHHHhcCCCCceEEEecCcc--HHHHH
Confidence 99999999999999999999999999999999999999 9999999999999999999999999999999996 99999
Q ss_pred HHHHHhccCceEEecchhhhHHHHhhCch-hhcccceeccchhhcc---------HHHhcCCCCcEEeeCcCCCCcCCCC
Q 006894 481 VASSLCQMGIKVATICKDDYEKLKLRIPV-EAQHNLVLSTSYAAHK---------TEQARAPKGTIFIPYTQIPPRKLRK 550 (627)
Q Consensus 481 va~~L~~~~~~v~l~~~~~~~~l~~~~~~-~~~~~lv~~~~~~~a~---------~e~~~a~~G~~~~~~sq~P~~~~R~ 550 (627)
||.+|||||||+++.++|||++||+|+++ ++|++|+++|+|.... +||++|||||+|+||||+|+++.||
T Consensus 464 ia~~lc~r~i~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~k~w~vg~~~~~~eq~~A~~gt~f~~~~~~p~~~~R~ 543 (620)
T PLN02869 464 IASALCQRGIQVATFREDEYEKLNKKLPNTECGSKLLLSKNYSEKIWLVGDGLTEEEQKKASKGTLFIPFSQFPPKRLRK 543 (620)
T ss_pred HHHHHHhcCCeEeecCHHHHHHHHHhccchhhhhhEEEeeccCceeEEecCCCCHHHHhhCCCCCeecccccCCchhhhc
Confidence 99999999999655899999999999999 8999999999875432 8999999999999999999999999
Q ss_pred CeeEeccCccccCCCccccccccccccchhHHHHHHhHHHhhhcCCCCCccchh-hhhHHHHHHHHHhcCCccCCCC
Q 006894 551 DCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQT-MCDIHQVWHASLRHGFRPLFPV 626 (627)
Q Consensus 551 dc~~~~~p~~~~P~~~~~~~~~e~~~pr~~~~Ac~a~~~~~alEg~~~~e~G~i-v~~i~~i~~aa~kHGF~p~~~~ 626 (627)
||+|+++|||++|+++||++|||||||||+|+||||||||||||||++|||| + |++||++|+||+||||+|+...
T Consensus 544 dC~Y~~~pam~~p~~~~~~~sce~~l~r~v~~a~~~~givh~legw~~he~g-~~v~~id~~W~aal~hgf~p~~~~ 619 (620)
T PLN02869 544 DCFYHTTPAMMSPKSFENVDSCENWLPRRAMSAWRVAGILHALEGWNVHECG-YTMFDIEKIWEASLQHGFRPLLIP 619 (620)
T ss_pred cccccCCccccCChhhcccchhhccccchhhhHhhhcceeeeecCccccccc-cccccHHHHHHHHHHcCCccCCCC
Confidence 9999999999999999999999999999999999999999999999999999 8 9999999999999999998754
No 2
>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].
Probab=100.00 E-value=5.2e-60 Score=444.28 Aligned_cols=155 Identities=60% Similarity=1.080 Sum_probs=149.8
Q ss_pred EEEeccCCChhhHHHHHHHHhccCceEEecchhhhHHHHhhCchhhcccceeccchhhcc---------HHHhcCCCCcE
Q 006894 466 VLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLVLSTSYAAHK---------TEQARAPKGTI 536 (627)
Q Consensus 466 V~l~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~lv~~~~~~~a~---------~e~~~a~~G~~ 536 (627)
|||+|+++ |||||||.+|||||+||+|.++|+|++||++++++++.|||++|+|++.. +||.+|||||+
T Consensus 1 V~L~G~~s--KvaraiA~~LC~rgv~V~m~~~~~y~~lk~~~~~~~~~~Lv~~~~~~~K~WlVGd~l~~~EQ~~Ap~Gt~ 78 (164)
T PF12076_consen 1 VFLTGNTS--KVARAIALALCRRGVQVVMLSKERYESLKSEAPEECQSNLVQSTSYQAKTWLVGDGLTEEEQKWAPKGTH 78 (164)
T ss_pred Ceeccccc--HHHHHHHHHHHhcCCEEEEecHHHHHHHHHHcCHHhhccEEeecCCCceeEEeCCCCCHHHHhcCCCCCE
Confidence 79999995 99999999999999999999999999999999999999999999988753 89999999999
Q ss_pred EeeCcCCCCcCCCCCeeEeccCccccCCCccccccccccccchhHHHHHHhHHHhhhcCCCCCccchhhhhHHHHHHHHH
Q 006894 537 FIPYTQIPPRKLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASL 616 (627)
Q Consensus 537 ~~~~sq~P~~~~R~dc~~~~~p~~~~P~~~~~~~~~e~~~pr~~~~Ac~a~~~~~alEg~~~~e~G~iv~~i~~i~~aa~ 616 (627)
|||||||||+++||||+|+++|||++|++++|+||||||||||||+||||||||||||||++||||.-|++||++|+||+
T Consensus 79 FipfsqfP~~~~RkDC~Y~~tPAM~~P~~~~nl~sCEnwlpRrVmsAwr~aGivHaLEgW~~HEcG~~v~~idkvW~AAl 158 (164)
T PF12076_consen 79 FIPFSQFPPKKVRKDCTYHSTPAMKVPKSMENLHSCENWLPRRVMSAWRAAGIVHALEGWNHHECGDDVDRIDKVWEAAL 158 (164)
T ss_pred EeeccCCCcHHHhCCCcccCcccccCChhhhhhhhhhccchhhHHHHHhhhhhhhhhcCCcccccCcccccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999933999999999999
Q ss_pred hcCCcc
Q 006894 617 RHGFRP 622 (627)
Q Consensus 617 kHGF~p 622 (627)
+|||+|
T Consensus 159 ~HGF~P 164 (164)
T PF12076_consen 159 KHGFRP 164 (164)
T ss_pred HcCCCC
Confidence 999998
No 3
>PRK14982 acyl-ACP reductase; Provisional
Probab=100.00 E-value=2.3e-36 Score=320.26 Aligned_cols=260 Identities=15% Similarity=0.192 Sum_probs=202.7
Q ss_pred HhcceEEEeecccCcc---eeeEEEE--eccCcccccchhhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccCC-c
Q 006894 357 IYGRTFVSESNTLDKL---KLQTWVV--PRYIVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNG-E 430 (627)
Q Consensus 357 ~~~~~f~~~~~~~~~~---~~~~w~~--pr~~~~y~~~~~~~~in~~Ie~Ai~~A~~~G~kv~~LG~ln~~e~ln~~g-~ 430 (627)
+...+|++++-.++-- ...-|.| |-.+-|. ...+.+.+.++|.+|+..|+|.|++|++||++++ +.+++ .
T Consensus 35 ~~~~p~~~~~~~v~S~~g~~~eg~~i~~~~~pe~l-~~~~~~~~~~~~~~a~~~a~~~G~~i~~Lg~~ts---iv~~~~~ 110 (340)
T PRK14982 35 CSAPPQLVDHIEVTSATGQTIEGKYIESCFLPEML-SNRRFKTARRKVLNAMALAQKKGINITALGGFSS---IIFENFN 110 (340)
T ss_pred hhCCCeEeeeEEEEeCCCCEEEEEEEeCCCCHHHH-hccChHHHHHHHHHHHHHHHHCCCeEEEcCChHH---HhcCCcc
Confidence 3346899998888544 4466775 5555454 4445666667799999999999999999999999 44443 2
Q ss_pred eeEecC-CCcccc---eeecCChhHHHHHHhcCCC---------CCcEEEEeccCCChhhHHHHHHHHhc-cCc-eEEe-
Q 006894 431 IYLERQ-PNKLKI---KVVDGSSLAAAVVVNSLPK---------TTAHVLLRGTVTANKVANAVASSLCQ-MGI-KVAT- 494 (627)
Q Consensus 431 ~~~~r~-p~~L~i---rvv~Gnsltaavv~~~ip~---------~~~~V~l~Gatg~~kig~ava~~L~~-~~~-~v~l- 494 (627)
+...+. .+ ++| +|||||||||++.++++.. ..++|+|+||+| +||+.+|+.|++ .|+ ++++
T Consensus 111 ~~~~~~~r~-i~ie~~~~TtGNs~T~~ll~~~V~la~~~lg~~l~~k~VLVtGAtG--~IGs~lar~L~~~~gv~~lilv 187 (340)
T PRK14982 111 LLQHKQVRN-TTLEWERFTTGNTHTAYVICRQVEQNAPRLGIDLSKATVAVVGATG--DIGSAVCRWLDAKTGVAELLLV 187 (340)
T ss_pred ccccccccc-ceeccccccCCchhHHHHHHHHHHHhHHHhccCcCCCEEEEEccCh--HHHHHHHHHHHhhCCCCEEEEE
Confidence 221112 12 455 8999999999999998864 367999999999 999999999985 454 6666
Q ss_pred -cchhhhHHHHhhCchh---------hcccce-eccchhhc-cHHHhcCCCCcEEeeCcCCCCc----CCCCCeeEeccC
Q 006894 495 -ICKDDYEKLKLRIPVE---------AQHNLV-LSTSYAAH-KTEQARAPKGTIFIPYTQIPPR----KLRKDCFYHSTP 558 (627)
Q Consensus 495 -~~~~~~~~l~~~~~~~---------~~~~lv-~~~~~~~a-~~e~~~a~~G~~~~~~sq~P~~----~~R~dc~~~~~p 558 (627)
|++++++.++.++... .+.++| .+++.... .++.+.+++++.+||.+ +|+. .-|+|+.+.+++
T Consensus 188 ~R~~~rl~~La~el~~~~i~~l~~~l~~aDiVv~~ts~~~~~~I~~~~l~~~~~viDiA-vPRDVd~~v~~~~V~v~~gG 266 (340)
T PRK14982 188 ARQQERLQELQAELGGGKILSLEEALPEADIVVWVASMPKGVEIDPETLKKPCLMIDGG-YPKNLDTKVQGPGIHVLKGG 266 (340)
T ss_pred cCCHHHHHHHHHHhccccHHhHHHHHccCCEEEECCcCCcCCcCCHHHhCCCeEEEEec-CCCCCCcccCCCCEEEEeCC
Confidence 8888999998886521 223333 44443333 26667889999999999 9944 335999999999
Q ss_pred ccccCCCcc-cc-ccccccccchhHHHHHHhHHHhhhcCCCCC-ccch--h-hhhHHHHHHHHHhcCCccCC
Q 006894 559 AMIIPPSLS-NM-HSCENWLGRRVMSAWRIAGIIHALEGWDLN-ECGQ--T-MCDIHQVWHASLRHGFRPLF 624 (627)
Q Consensus 559 ~~~~P~~~~-~~-~~~e~~~pr~~~~Ac~a~~~~~alEg~~~~-e~G~--i-v~~i~~i~~aa~kHGF~p~~ 624 (627)
.+++|.+++ ++ ...|+++|+|+++||+||+||++||||++| ++|| | +++|++|.++|+||||+|+-
T Consensus 267 ~V~~p~~vd~~l~~~v~~~~~~r~~~Ac~AEtiiL~leg~~~~fS~Gr~~i~~~~v~~i~~~a~kHGf~~~~ 338 (340)
T PRK14982 267 IVEHSLDIDWKIMEIAEMDNPQRQMFACFAEAMLLEFEGCHTNFSWGRNQITLEKMEFIGEASVKHGFSPLL 338 (340)
T ss_pred ccccCCCcCccHHHHHhccchhhHHHHHHHHHHHHHhcCCccCCCcCccccCHHHHHHHHHHHHHcCCcccc
Confidence 999999977 33 346789999999999999999999999999 6997 8 99999999999999999963
No 4
>COG5322 Predicted dehydrogenase [General function prediction only]
Probab=100.00 E-value=2e-36 Score=305.10 Aligned_cols=223 Identities=19% Similarity=0.173 Sum_probs=183.4
Q ss_pred hhhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeEecCCCccc-ceeecCChhHHHHHHhcCCC-------
Q 006894 390 WRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLK-IKVVDGSSLAAAVVVNSLPK------- 461 (627)
Q Consensus 390 ~~~~~in~~Ie~Ai~~A~~~G~kv~~LG~ln~~e~ln~~g~~~~~r~p~~L~-irvv~Gnsltaavv~~~ip~------- 461 (627)
++.|++.|++.+|++.|+|.|++|+|||+|+|+. .|.+.. ...|+|. +. +|+|||||+||+++|.+|.+
T Consensus 87 s~pkaatrrvl~a~~~a~~~Ga~V~gLGgFssIV-gn~~~n-~q~~~~e-~t~~~~ttgns~Tayaa~r~Vl~~~~~lGi 163 (351)
T COG5322 87 SRPKAATRRVLNAMALAQKLGADVTGLGGFSSIV-GNLGQN-VQVRNVE-LTFTRFTTGNSHTAYAACRQVLKHFAQLGI 163 (351)
T ss_pred hCHHHHHHHHHHHHHHHHHcCCeEEeecchhhhh-cccccc-ccccceE-EEEEecccCCccchHHHHHHHHHHHHHhCc
Confidence 5678888889999999999999999999999964 244433 5668988 88 99999999999999999966
Q ss_pred --CCcEEEEeccCCChhhHHHHHHHHh-ccCceEEe------cchhhhHHHHhhCchhhcccceeccc---hhhc-----
Q 006894 462 --TTAHVLLRGTVTANKVANAVASSLC-QMGIKVAT------ICKDDYEKLKLRIPVEAQHNLVLSTS---YAAH----- 524 (627)
Q Consensus 462 --~~~~V~l~Gatg~~kig~ava~~L~-~~~~~v~l------~~~~~~~~l~~~~~~~~~~~lv~~~~---~~~a----- 524 (627)
..++|++||||| +||++||++|+ +-+++.++ |++++++.||+++.++. +.+++ .+++
T Consensus 164 dlsqatvaivGa~G--~Ia~~Iar~la~~~~~~~ll~r~aea~~rq~l~~l~e~~~~~~----i~s~d~~~~~e~i~v~v 237 (351)
T COG5322 164 DLSQATVAIVGATG--DIASAIARWLAPKVGVKELLLRDAEARNRQRLTLLQEELGRGK----IMSLDYALPQEDILVWV 237 (351)
T ss_pred CHHHCeEEEecCCc--hHHHHHHHHhccccCEEEEecccHHhhhhhhhhhcccccCCCe----eeeccccccccceEEEE
Confidence 488999999999 99999999999 55777777 56666777777766653 22222 2222
Q ss_pred -------cHHHhcCCCCcEEeeCcCCCCc-----CCCCCeeEeccCccccCCC--ccccccccccccchhHHHHHHhHHH
Q 006894 525 -------KTEQARAPKGTIFIPYTQIPPR-----KLRKDCFYHSTPAMIIPPS--LSNMHSCENWLGRRVMSAWRIAGII 590 (627)
Q Consensus 525 -------~~e~~~a~~G~~~~~~sq~P~~-----~~R~dc~~~~~p~~~~P~~--~~~~~~~e~~~pr~~~~Ac~a~~~~ 590 (627)
.+.+.+++||+.++|=. .|.. +-|.|+.++.++-+.-|.+ |..+...++ |.|+++||.||++|
T Consensus 238 As~~~g~~I~pq~lkpg~~ivD~g-~P~dvd~~vk~~~~V~Ii~GGlV~~s~~it~gi~~~~~~--p~~~l~aClAEtli 314 (351)
T COG5322 238 ASMPKGVEIFPQHLKPGCLIVDGG-YPKDVDTSVKNVGGVRIIPGGLVEHSLDITWGIMKIVGM--PVRQLFACLAETLI 314 (351)
T ss_pred eecCCCceechhhccCCeEEEcCC-cCcccccccccCCCeEEecCccccCccccchhHHHHccc--chhhHHHHHHHHHH
Confidence 26689999999999988 8854 3346788888888877775 565554444 99999999999999
Q ss_pred hhhcCCCCC-ccch-h-hhhHHHHHHHHHhcCCccCC
Q 006894 591 HALEGWDLN-ECGQ-T-MCDIHQVWHASLRHGFRPLF 624 (627)
Q Consensus 591 ~alEg~~~~-e~G~-i-v~~i~~i~~aa~kHGF~p~~ 624 (627)
+++|||++| +||| | +|+|++|.++|.||||+|+.
T Consensus 315 l~~eg~~~~fS~Grq~~~dk~~~ig~~aekhGF~p~~ 351 (351)
T COG5322 315 LEFEGEHTNFSWGRQILVDKMEFIGDAAEKHGFKPLD 351 (351)
T ss_pred HHhcchhhhccccccccHHHHHHHHHHHHHcCCCCCC
Confidence 999999999 6999 8 99999999999999999964
No 5
>KOG0873 consensus C-4 sterol methyl oxidase [Lipid transport and metabolism]
Probab=100.00 E-value=5.8e-33 Score=282.95 Aligned_cols=215 Identities=19% Similarity=0.247 Sum_probs=172.6
Q ss_pred HHHHHHHHHHHHhHHHHHh--hchhhHhcCcCCCCCccccchhhhhccc-----hhhHHHHHHHHHHHhhcC-C---CCC
Q 006894 50 IFPFLLLRMLHDQIWISLS--RYRTAKRNNRIVDKAIEFDQVDRERNWD-----DQIVFNGLIFYIVRMLIP-P---SYS 118 (627)
Q Consensus 50 il~~~~lRyl~~~~wi~~~--~~~~~~~k~kIq~~~~~~~qvdrE~~~~-----n~iil~~li~~l~~~~~p-~---~~~ 118 (627)
++...+.-++.+.+|+.++ +.+++.||||||+++.+ ..++.++|. ||++++.++..+.+...+ . ...
T Consensus 35 ~~~~~~~y~l~~lpf~~iD~t~~~~~~~rYKIQp~k~~--s~~~~~kc~k~vl~n~~~v~~p~~~~~y~~~~~~~~~~~~ 112 (283)
T KOG0873|consen 35 FIVHELVYWLFCLPFIFIDVTNRPPFLRRYKIQPKKNP--SLSKQLKCLKVVLLNHFLVVLPLTLVSYPFVEWFGLPSGA 112 (283)
T ss_pred HHHHHHHHHHhcchheEeecccCcchhhhhccCCCCCC--CHHHHHHHHHHHHHHHHHHHhhHHHHhHHHHHHhCCCcCC
Confidence 4444555555566666544 46889999999988764 445555553 777777777666654432 1 223
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhcccCCCcCcCCChhhhhhhhhHHHHHHHHHHHHHHHHHHH
Q 006894 119 NLRFWRSDGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMV 198 (627)
Q Consensus 119 ~lP~W~~~gli~~lll~~l~~Df~~Yw~HRllH~~~ly~r~H~~HH~s~~p~~~ta~~~hplE~ll~~~l~~iPll~~~l 198 (627)
.+|.|.+ ++.++++++++.|+.|||.||++|++++||.+||+||++.+|.+.++.|+||+|+++.++ .|+.++.+
T Consensus 113 plPt~~~--~l~~l~i~~liEd~~fY~~HRL~H~~~~Yk~iHKvHHe~taPf~~sa~YaHp~E~~~lg~---~~~~~p~~ 187 (283)
T KOG0873|consen 113 PLPSWKE--MLAQLVVFFLIEDIGFYWSHRLFHHKWLYKYIHKVHHEYTAPFGLSAEYAHPLEHLFLGL---GTVMGPAL 187 (283)
T ss_pred CCCcHHH--HHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhhhhcccCchhHhhhhcCHHHHHHcCC---hhhhhhHH
Confidence 4667765 999999999999999999999999999999999999999999999999999999998875 34444443
Q ss_pred hhhhhHHHHHHHHHHHHHHHhhcccCceecccccccccCCcccccCChhhhhhhhcCCCCCcCCCchhhhhhcCCCCCC
Q 006894 199 LKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRS 277 (627)
Q Consensus 199 lg~~s~~~~~~y~i~~~~~~~~~Hsg~e~~P~~~~~~lp~L~~li~tp~~H~lHH~~~~~NYG~~f~~WDrLFGT~~~~ 277 (627)
++. |+.+.++|+++..+.++..||||++ |+++.+.+|+. .+.++||+||..+.+||+..|+.||||+||....
T Consensus 188 ~~~-H~~t~wiw~~l~i~~t~~~HsGY~f-Pwsl~~~~pfy----~ga~~HD~HH~~f~~n~~~~f~~~D~i~GTd~~~ 260 (283)
T KOG0873|consen 188 LCG-HVITLWIWIALRILETVESHSGYDF-PWSLSKLIPFY----GGAEHHDYHHLVFIGNFASVFGYLDRIHGTDSTY 260 (283)
T ss_pred hhh-HHHHHHHHHHHHHHHHhhccCCCCC-CccccccCccc----CCCcccchhhhhccccccchhHHHHHHhccCccH
Confidence 443 9999999999999999999999997 99988887762 5899999999999999999999999999997643
No 6
>COG3000 ERG3 Sterol desaturase [Lipid metabolism]
Probab=99.94 E-value=1.4e-26 Score=239.57 Aligned_cols=152 Identities=28% Similarity=0.448 Sum_probs=131.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhcccCCCcCcCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhHHH
Q 006894 127 GVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIAS 206 (627)
Q Consensus 127 gli~~lll~~l~~Df~~Yw~HRllH~~~ly~r~H~~HH~s~~p~~~ta~~~hplE~ll~~~l~~iPll~~~llg~~s~~~ 206 (627)
.+++++++.+++.|+.+||.||+.|+.++||++|++||++.+|+++|+.+.||+|.++......+|+.+ ++ .+..+
T Consensus 94 ~~~l~~~~~~~~~D~~~Y~~HR~~H~~~~~w~~H~~HH~~~~~~~~t~~~~hp~e~ll~~~~~~~~~~l---~~-~~~~~ 169 (271)
T COG3000 94 PFALQLLLAFLFLDLGYYWAHRLLHRVPLLWAFHKVHHSSEVPDPLTALRFHPLEILLLAFLGLLPLLL---LG-LSPVA 169 (271)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhhcCcccCCchhhhhcChHHHHHHHHHHHHHHHH---hc-CCHHH
Confidence 357778888899999999999999999999999999999999999999999999999987765566554 23 57777
Q ss_pred HHHHHHHHHHHHhhcccCceecccccccccCCcccccCChhhhhhhhcCC--CCCcCCCchhhhhhcCCCCCCCchHHHH
Q 006894 207 FVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQF--RTNYSLFMPIYDYIYGTIDRSSDSVYEK 284 (627)
Q Consensus 207 ~~~y~i~~~~~~~~~Hsg~e~~P~~~~~~lp~L~~li~tp~~H~lHH~~~--~~NYG~~f~~WDrLFGT~~~~~~~~~~~ 284 (627)
+..+.++..+.+.++|||++. | .. .+++++++.+|++|++||+++ ++|||.++++|||+|||+.++.++..++
T Consensus 170 ~~~~~~~~~~~~~~~H~~~~~-~-~~---~~~~~~v~~~p~~H~lHH~~~~~~~Nyg~~~~~WDrlFGT~~~~~~~~~~~ 244 (271)
T COG3000 170 VALLFIFLLFWAVLIHSNLDL-P-LP---LGWLRYVFNTPRHHRLHHSKDPYDKNYGVTLTFWDRLFGTYHPPDEREPDK 244 (271)
T ss_pred HHHHHHHHHHHHHHHhcCccc-c-CC---cccceeeecCchHHHHhccCCCCCCcchhhhHHHHHHcccCCCCcccCccc
Confidence 778888889999999999996 4 22 345666789999999999997 4999999999999999999998888887
Q ss_pred Hhh
Q 006894 285 SLK 287 (627)
Q Consensus 285 ~~~ 287 (627)
++.
T Consensus 245 ~~~ 247 (271)
T COG3000 245 IGV 247 (271)
T ss_pred ccc
Confidence 665
No 7
>KOG0872 consensus Sterol C5 desaturase [Lipid transport and metabolism]
Probab=99.90 E-value=9.5e-24 Score=212.96 Aligned_cols=144 Identities=21% Similarity=0.365 Sum_probs=120.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhcccCCCcCcCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhHH
Q 006894 126 DGVILTILVHMGPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIA 205 (627)
Q Consensus 126 ~gli~~lll~~l~~Df~~Yw~HRllH~~~ly~r~H~~HH~s~~p~~~ta~~~hplE~ll~~~l~~iPll~~~llg~~s~~ 205 (627)
...++.++++++..||.+||.||.+|++.+||+.|+.||.+...+|+++.++||++.++++ +|-.+..+..+.|..
T Consensus 126 ~~~~~~i~~flfF~Df~iYw~HR~lH~~~vy~~LH~~HH~~~~~tpfAslafhpidg~lqa----ip~~I~~Fi~Plh~~ 201 (312)
T KOG0872|consen 126 FLLFVSIFLFLFFTDFGIYWAHRELHHRGVYKRLHKPHHIWNICTPFASLAFHPIDGFLQA----IPYHIYPFIFPLHKV 201 (312)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhcchhhhhhccCchhhhhcCcchhHhhh----chhHheeeeecchHH
Confidence 4467778888899999999999999999999999999999999999999999999999876 344443333444666
Q ss_pred HHHHHHHHHHHHHhhcccCceecccccccccCCcccccCChhhhhhhhcCCCCCcCCCchhhhhhcCCCCCCCchHHH
Q 006894 206 SFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQFRTNYSLFMPIYDYIYGTIDRSSDSVYE 283 (627)
Q Consensus 206 ~~~~y~i~~~~~~~~~Hsg~e~~P~~~~~~lp~L~~li~tp~~H~lHH~~~~~NYG~~f~~WDrLFGT~~~~~~~~~~ 283 (627)
+.+....+..+++++.|.|.-. -+.+.++||.+|..||..++.|||.++.+|||+|||+..+.++.++
T Consensus 202 t~L~l~~f~~iwt~~IHd~~~~----------~l~~~ingaahHtvHH~~f~~NYG~~tilwDrmfgSfr~p~~~~~d 269 (312)
T KOG0872|consen 202 TYLSLFTFVNIWTISIHDGIYG----------SLNPPINGAAHHTVHHTYFDYNYGQYTILWDRMFGSFRAPDHEDFD 269 (312)
T ss_pred HHHHHHHHHHhHheeeeccccc----------cccCccccccccceeeeeEecCCCcEEEeHHhccCcccCccccccc
Confidence 6666666678888999988642 1344578999999999999999999999999999999988877665
No 8
>KOG0874 consensus Sphingolipid hydroxylase [Lipid transport and metabolism]
Probab=99.79 E-value=1.3e-20 Score=185.15 Aligned_cols=147 Identities=20% Similarity=0.360 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc-hhhhhhhcccCCCcCcCCChhhhhhhhhHHHHHHHHH-HHHHHHHHHHhhhhhHH
Q 006894 128 VILTILVHMGPVEFLYYWFHRALH-HHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLL-FAIPLVTTMVLKNASIA 205 (627)
Q Consensus 128 li~~lll~~l~~Df~~Yw~HRllH-~~~ly~r~H~~HH~s~~p~~~ta~~~hplE~ll~~~l-~~iPll~~~llg~~s~~ 205 (627)
...+++..+++.|.+.|++||.|| .+.+|+.+|++||+-.+|.+..+.|.||+|.++...+ .++.++ +.| .++-
T Consensus 122 ~A~q~f~aflviDtWQYF~HRymH~NK~LYk~iHs~HHrL~VPYayGALyNhP~EGllLDT~G~gla~l---~sg-lspr 197 (287)
T KOG0874|consen 122 LARQFFAAFLVIDTWQYFLHRYMHMNKFLYKHIHSQHHRLIVPYAYGALYNHPVEGLLLDTIGGGLAFL---LSG-LSPR 197 (287)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhceeEecchhhhhhhcCcchhhhhhhhchHHHHH---HcC-CCcc
Confidence 456777888899999999999999 6789999999999999999999999999999987653 111111 123 2344
Q ss_pred HHHHHHHHHHHHHhhcccCceecccccccccCCcccccCChhhhhhhhcC--CCCCcCC-CchhhhhhcCCCCCCCchHH
Q 006894 206 SFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ--FRTNYSL-FMPIYDYIYGTIDRSSDSVY 282 (627)
Q Consensus 206 ~~~~y~i~~~~~~~~~Hsg~e~~P~~~~~~lp~L~~li~tp~~H~lHH~~--~~~NYG~-~f~~WDrLFGT~~~~~~~~~ 282 (627)
+.+++..+.++-++.+||||-+ |..+++.+ +-+.+.+||+||+. .++||+. +|++||+++||+.+.+.|..
T Consensus 198 ~aiifFtfaTiKTVDDHCGy~l-P~dpfqm~-----F~NNa~YHDiHHQ~yG~k~NFsQPFFtfWD~ilgTYmp~~~E~~ 271 (287)
T KOG0874|consen 198 TAIIFFTFATIKTVDDHCGYWL-PGDPFQMF-----FPNNAAYHDIHHQLYGTKYNFSQPFFTFWDRILGTYMPYSLEKR 271 (287)
T ss_pred ceEEEEEeeeeeeecccccccc-CCCceeEe-----ccCCchhhhhhhhhhccccccCCcHHHHHHHHHhhcCCchhccc
Confidence 4444445556778899999976 88776642 23579999999998 6899985 89999999999998875544
Q ss_pred HH
Q 006894 283 EK 284 (627)
Q Consensus 283 ~~ 284 (627)
.+
T Consensus 272 ~e 273 (287)
T KOG0874|consen 272 LE 273 (287)
T ss_pred cc
Confidence 43
No 9
>PF04116 FA_hydroxylase: Fatty acid hydroxylase superfamily; InterPro: IPR006694 This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases. Beta-carotene hydroxylase is involved in zeaxanthin synthesis by hydroxylating beta-carotene, but the enzyme may be involved in other pathways []. This family includes C-5 sterol desaturase and C-4 sterol methyl oxidase. Members of this family are involved in cholesterol biosynthesis and biosynthesis a plant cuticular wax. These enzymes contain two copies of a HXHH motif. Members of this family are integral membrane proteins.; GO: 0005506 iron ion binding, 0016491 oxidoreductase activity, 0006633 fatty acid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.68 E-value=5.6e-17 Score=144.54 Aligned_cols=111 Identities=29% Similarity=0.480 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHHHhhc-hhhhhhhcccCCCcCcCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 006894 134 VHMGPVEFLYYWFHRALH-HHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTMVLKNASIASFVGYII 212 (627)
Q Consensus 134 l~~l~~Df~~Yw~HRllH-~~~ly~r~H~~HH~s~~p~~~ta~~~hplE~ll~~~l~~iPll~~~llg~~s~~~~~~y~i 212 (627)
+.+++.|+++||+||++| .+.+| ++|+.||+.++|+++++.+.+|+|.++..++ ++++..+++..+..++.++.+
T Consensus 3 ~~~l~~d~~~Y~~HRl~H~~~~l~-~~H~~HH~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 78 (114)
T PF04116_consen 3 LGFLLWDFWEYWMHRLLHKIPFLW-RIHKVHHSPKNPTPLSAFRFHPLEALLLALL---PLLLPLLLLPFHALAFLLGIA 78 (114)
T ss_pred eeHHHHHHHHHHHHHHHhcCchHH-HHHHHHhCCcccCchHHHHcChHHHHHHHHH---HHHHHHHHHhHhHHHHHHHHH
Confidence 456778999999999999 55555 9999999999999999999999999987653 333333345567778888888
Q ss_pred HHHHHHhhcccCceecccccccccCCcccccCChhhhhhhhc
Q 006894 213 YVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHT 254 (627)
Q Consensus 213 ~~~~~~~~~Hsg~e~~P~~~~~~lp~L~~li~tp~~H~lHH~ 254 (627)
+..+.+.++|||+.. + ..+..+++..+|++|+.||+
T Consensus 79 ~~~~~~~~~H~~~~~-~-----~~~~~~~~~~~~~~H~~HH~ 114 (114)
T PF04116_consen 79 LFYLWYIFIHSGYHH-R-----FPPRLRYLFVTPRHHDLHHS 114 (114)
T ss_pred HHHHHHHHhhcCccC-C-----CCCcchhHhcCHHHHHhhCc
Confidence 889999999999921 1 12456777889999999995
No 10
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=99.29 E-value=1.8e-11 Score=120.14 Aligned_cols=154 Identities=12% Similarity=0.029 Sum_probs=108.9
Q ss_pred ecCChhHHHHHHhcCCC---------CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCchh---
Q 006894 445 VDGSSLAAAVVVNSLPK---------TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVE--- 510 (627)
Q Consensus 445 v~Gnsltaavv~~~ip~---------~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~--- 510 (627)
|+||++|||++++.+.+ ..++|+++|+|| .+|+++++.|+++|.+|.+ |+.++.+++.+++.+.
T Consensus 1 ~~G~~~ta~aav~~~~~~l~~~~~~l~~~~vlVlGgtG--~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~ 78 (194)
T cd01078 1 SNGSNTTAAAAVAAAGKALELMGKDLKGKTAVVLGGTG--PVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGE 78 (194)
T ss_pred CCCcHHHHHHHHHHHHHHHHHhCcCCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCC
Confidence 68999999999988864 346999999999 9999999999999999988 8888888877655321
Q ss_pred -----------------hcccce-eccchhh-ccHH-HhcCCCCcEEeeCcCCCCc------CCCCCeeEeccCccccCC
Q 006894 511 -----------------AQHNLV-LSTSYAA-HKTE-QARAPKGTIFIPYTQIPPR------KLRKDCFYHSTPAMIIPP 564 (627)
Q Consensus 511 -----------------~~~~lv-~~~~~~~-a~~e-~~~a~~G~~~~~~sq~P~~------~~R~dc~~~~~p~~~~P~ 564 (627)
.+.++| ..|+... ...+ +...++|.+++|.. .||. +.|+|.++.++|...-|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~diVi~at~~g~~~~~~~~~~~~~~~vv~D~~-~~~~~~~~~~~~~~~~~~~~g~~~~g~- 156 (194)
T cd01078 79 GVGAVETSDDAARAAAIKGADVVFAAGAAGVELLEKLAWAPKPLAVAADVN-AVPPVGIEGIDVPDKGVDREGKVPYGA- 156 (194)
T ss_pred cEEEeeCCCHHHHHHHHhcCCEEEECCCCCceechhhhcccCceeEEEEcc-CCCCCCcccccccCCceecCCCeEEEe-
Confidence 112333 2222111 0122 22344589999999 6643 57899999887733212
Q ss_pred CccccccccccccchhHHHHHHhHHHhhhcCCCCCccchhhhhHHHHHHHHHhc
Q 006894 565 SLSNMHSCENWLGRRVMSAWRIAGIIHALEGWDLNECGQTMCDIHQVWHASLRH 618 (627)
Q Consensus 565 ~~~~~~~~e~~~pr~~~~Ac~a~~~~~alEg~~~~e~G~iv~~i~~i~~aa~kH 618 (627)
....++|+++.+||++|.|. +|+... +.++|-+.|+||
T Consensus 157 ------~~~~g~~~~~~~~~~ae~~~--~~~~~~--------~~~~~~~~~~~~ 194 (194)
T cd01078 157 ------IGVGGLKMKTHRACIAKLFE--SNPLVL--------DAEEIYDLAKEM 194 (194)
T ss_pred ------eccchhHHHHHHHHHHHHhh--cCCeee--------chHHHHHHHhcC
Confidence 13478999999999999998 366543 366677777765
No 11
>PLN02434 fatty acid hydroxylase
Probab=99.05 E-value=3.6e-09 Score=107.91 Aligned_cols=136 Identities=21% Similarity=0.290 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh-hchh-------hhhhhcccCCCcCcCCChhhhhhhhhHHHHHHHHHHHHHHHHHH--
Q 006894 128 VILTILVHMGPVEFLYYWFHRA-LHHH-------YLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTM-- 197 (627)
Q Consensus 128 li~~lll~~l~~Df~~Yw~HRl-lH~~-------~ly~r~H~~HH~s~~p~~~ta~~~hplE~ll~~~l~~iPll~~~-- 197 (627)
.+..+++.+++.-+.+|.+||. +|.. .+....|..||... .-..-..++|.-.++....+..++..+.
T Consensus 83 ~~~~~~~G~~~wtl~EY~lHRflfH~~p~~~~~~~~hfllHg~HH~~P--~D~~rLv~PP~~~~~l~~~~~~l~~~~~~~ 160 (237)
T PLN02434 83 VVLMVAFGVFIWTLLEYILHRFLFHIKTKSYWGNTAHYLLHGCHHKHP--MDGLRLVFPPAATAILCVPFWNLIALFATP 160 (237)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHhhcCC--CCCCCeecCcHHHHHHHHHHHHHHHHHcch
Confidence 4555667788899999999997 7842 23346799999753 3223334566554433322211111100
Q ss_pred -HhhhhhHHHHHHHHHHHHHHHhhcccCceecccccccccCCcccccCChhhhhhhhcC-CCCCcCCCchhhhhhcCCCC
Q 006894 198 -VLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ-FRTNYSLFMPIYDYIYGTID 275 (627)
Q Consensus 198 -llg~~s~~~~~~y~i~~~~~~~~~Hsg~e~~P~~~~~~lp~L~~li~tp~~H~lHH~~-~~~NYG~~f~~WDrLFGT~~ 275 (627)
.....-...+.+|++| +......|.+ + |.. ++++. --++|..||.+ .+.|||...++||++|||..
T Consensus 161 ~~a~~~~~G~l~gYl~Y-d~~Hy~lH~~-~--p~~-----~~~r~---lkr~H~~HHfk~~~~~fGVTs~~wD~vFGT~~ 228 (237)
T PLN02434 161 ATAPALFGGGLLGYVMY-DCTHYFLHHG-Q--PST-----DVLRN---LKKYHLNHHFRDQDKGFGITSSLWDRVFGTLP 228 (237)
T ss_pred hHHHHHHHHHHHHHHHH-HHHHHHHHhc-C--cch-----HHHHH---HHHHHHHHcCCCCCCCCCcCchHHHHhcCCCC
Confidence 0000111234445443 5566666753 2 321 22332 37899999987 69999999999999999985
Q ss_pred CC
Q 006894 276 RS 277 (627)
Q Consensus 276 ~~ 277 (627)
++
T Consensus 229 ~~ 230 (237)
T PLN02434 229 PS 230 (237)
T ss_pred Cc
Confidence 54
No 12
>KOG0539 consensus Sphingolipid fatty acid hydroxylase [Lipid transport and metabolism]
Probab=97.75 E-value=9.1e-05 Score=73.96 Aligned_cols=136 Identities=20% Similarity=0.295 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHHHHHHh-hchhh---hh------hhcccCCCcCcCCChhhhhhhhhHHHHHHHHHHHHHHHHHH--
Q 006894 130 LTILVHMGPVEFLYYWFHRA-LHHHY---LY------SRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTTM-- 197 (627)
Q Consensus 130 ~~lll~~l~~Df~~Yw~HRl-lH~~~---ly------~r~H~~HH~s~~p~~~ta~~~hplE~ll~~~l~~iPll~~~-- 197 (627)
..+++.++...+.+|-.||+ +|.+. =| --+|..||... .--.-..++|+-..+....+..++-.+.
T Consensus 85 ~~f~~Gvf~WTl~EY~lHRflFH~k~~~~s~~~~t~Hfl~HGcHHk~P--~D~~RLVfPP~~~~il~~pfy~~~~~vl~~ 162 (240)
T KOG0539|consen 85 GLFVIGVFTWTLIEYTLHRFLFHIKPNPDSYWLITLHFLIHGCHHKLP--MDGYRLVFPPTPFAILAAPFYLILSLVLPH 162 (240)
T ss_pred HHHHHHHHHHHHHHHHHHheEEEecCCCCchHHHHHHHHHhcccccCC--CCCceEecCCchHHHHHHHHHHHHHHhcCc
Confidence 34456667789999999997 68541 11 23699999753 2233345666665554443333322110
Q ss_pred Hhh-hhhHHHHHHHHHHHHHHHhhcccCceecccccccccCCcccccCChhhhhhhhcC-CCCCcCCCchhhhhhcCCCC
Q 006894 198 VLK-NASIASFVGYIIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ-FRTNYSLFMPIYDYIYGTID 275 (627)
Q Consensus 198 llg-~~s~~~~~~y~i~~~~~~~~~Hsg~e~~P~~~~~~lp~L~~li~tp~~H~lHH~~-~~~NYG~~f~~WDrLFGT~~ 275 (627)
..+ ..-...+++|+.|- .....-|-|- .|+. |.++ .-..+|.-||.+ .+..||....+||++|||.-
T Consensus 163 ~~~~a~faG~l~GYV~YD-mtHYyLHhg~--p~~~-----~~~~---~lK~yHl~HHfk~q~~GfGItS~lWD~VFgTl~ 231 (240)
T KOG0539|consen 163 PVAPAGFAGGLLGYVCYD-MTHYYLHHGS--PPKR-----PYLK---HLKKYHLNHHFKHQDLGFGITSSLWDYVFGTLG 231 (240)
T ss_pred chhhhhhccchhhhhhhh-hhhhhhhcCC--CCCc-----hHHH---HHHHHHhhhhhhccccCccccHHHHHHHhccCC
Confidence 000 01112455676654 3444444331 1221 2232 236789999987 89999999999999999986
Q ss_pred CCC
Q 006894 276 RSS 278 (627)
Q Consensus 276 ~~~ 278 (627)
...
T Consensus 232 ~~~ 234 (240)
T KOG0539|consen 232 PLK 234 (240)
T ss_pred CCc
Confidence 654
No 13
>PLN02601 beta-carotene hydroxylase
Probab=97.57 E-value=0.00059 Score=70.54 Aligned_cols=132 Identities=20% Similarity=0.313 Sum_probs=71.7
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHHHHh-hchhhhhhhcccCCCcCcCCChhhhhhhhhHHHHHHHHHHHHHHHHH
Q 006894 118 SNLRFWRSDGVILTILVHMGPVEFLYYWFHRA-LHHHYLYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLLFAIPLVTT 196 (627)
Q Consensus 118 ~~lP~W~~~gli~~lll~~l~~Df~~Yw~HRl-lH~~~ly~r~H~~HH~s~~p~~~ta~~~hplE~ll~~~l~~iPll~~ 196 (627)
.++|.-...+.+..++..++..|++-.|.||. ||. +.|..|+-||+...- ++. ..+. +.+++++|.+.+
T Consensus 126 g~~p~~em~~~~al~lgtfvgMEf~Aw~aHKYvMHG--~LW~lH~sHH~Pr~g-~FE--~NDl-----FaVifAvpAIaL 195 (303)
T PLN02601 126 GEVSMLEMFGTFALSVGAAVGMEFWARWAHRALWHD--SLWNMHESHHKPREG-AFE--LNDV-----FAIVNAVPAIGL 195 (303)
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cchhhhhhcCCCCCC-Ccc--cccc-----hhhhhHHHHHHH
Confidence 45564332233444455566789999999997 786 358899999987642 222 1111 111233333333
Q ss_pred HHhhhhh-----------HHHHHHH-HHHHHHHHhhcccCceecccccccccCCcccccCChhhhhhhhcC--CCCCcCC
Q 006894 197 MVLKNAS-----------IASFVGY-IIYVDFMNNMGHCNFEFIPMWLFTVFPPLKFLMYTPSYHSLHHTQ--FRTNYSL 262 (627)
Q Consensus 197 ~llg~~s-----------~~~~~~y-~i~~~~~~~~~Hsg~e~~P~~~~~~lp~L~~li~tp~~H~lHH~~--~~~NYG~ 262 (627)
+..|..+ -..+.+| ++|+.+...+.|--+ |.....+-|+++. -...|.+||+. ...+||.
T Consensus 196 ~~~G~~~~g~~p~~~fgiGlGITlYGiaYffVHDgLVHqRf---p~~~~a~~~Y~rr---l~~AHklHHa~Ke~Gv~FGf 269 (303)
T PLN02601 196 LYYGFFNKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRF---PVGPIANVPYLRK---VAAAHQLHHTDKFKGVPYGL 269 (303)
T ss_pred HHHhhccccccHHHHHHHHHhHHHHHHHHHHHhhhhhcccc---ccCCCCCCHHHHH---HHHHHHhhccCCcCCccceE
Confidence 3222210 0112223 235555666777533 3322223345554 47899999983 5789998
Q ss_pred Cch
Q 006894 263 FMP 265 (627)
Q Consensus 263 ~f~ 265 (627)
++.
T Consensus 270 ll~ 272 (303)
T PLN02601 270 FLG 272 (303)
T ss_pred Eec
Confidence 654
No 14
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.17 E-value=0.00059 Score=70.20 Aligned_cols=44 Identities=25% Similarity=0.323 Sum_probs=41.8
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 509 (627)
+-|+++||++ -||.|+|+.|++.|.+|.+ |++||+++|+.++++
T Consensus 7 kv~lITGASS--GiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~ 52 (246)
T COG4221 7 KVALITGASS--GIGEATARALAEAGAKVVLAARREERLEALADEIGA 52 (246)
T ss_pred cEEEEecCcc--hHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc
Confidence 6789999996 9999999999999999999 999999999999987
No 15
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.08 E-value=0.00066 Score=70.92 Aligned_cols=49 Identities=16% Similarity=0.252 Sum_probs=44.9
Q ss_pred CCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCchhh
Q 006894 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA 511 (627)
Q Consensus 461 ~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~ 511 (627)
...+.++++||++ -||+++|+.|+++|.+|+| |++||+++|++++....
T Consensus 4 ~~~~~~lITGASs--GIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~ 54 (265)
T COG0300 4 MKGKTALITGASS--GIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT 54 (265)
T ss_pred CCCcEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh
Confidence 3567899999997 9999999999999999999 99999999999988755
No 16
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.90 E-value=0.003 Score=69.80 Aligned_cols=136 Identities=19% Similarity=0.174 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHhhchhhhhhhcccCCCcCcCCChh---------hhhhhhhHHHHHHHHHHHHHHHHHH-HhhhhhH--
Q 006894 137 GPVEFLYYWFHRALHHHYLYSRYHSHHHSSVVTEPI---------TSVIHPFAEHIVYFLLFAIPLVTTM-VLKNASI-- 204 (627)
Q Consensus 137 l~~Df~~Yw~HRllH~~~ly~r~H~~HH~s~~p~~~---------ta~~~hplE~ll~~~l~~iPll~~~-llg~~s~-- 204 (627)
+..|..+=.+|-+.|+...+.|.|..||+...++-- +..|+.|.|.++..++-.+|-.... ......+
T Consensus 17 ~~~~~~~d~~h~~~h~~~~l~~~h~~hh~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (406)
T PRK07424 17 LWVEIVRDSYHALAHQWNPLYRLHNWHHRVFRPDLSVVSEEIYRKAHWYNDVPEALVMLLFGTLPVLLLQQWNVPYGWLA 96 (406)
T ss_pred HHHHHHHHHHHHHHhhchHHHHHHHhHHhhcCCcCCcccHHHHhhhhhhcCCHHHHHHHHHhhHHHHHHhhhcccccchh
Confidence 345666666677777666667899999998877532 2458899997665443222222211 1000000
Q ss_pred HHHHHHHHHHHH------HHhhcc-cCcee--cccccccccCCcccccCChhhhhhhhcCCC-CCcCCCchhhhhhcCCC
Q 006894 205 ASFVGYIIYVDF------MNNMGH-CNFEF--IPMWLFTVFPPLKFLMYTPSYHSLHHTQFR-TNYSLFMPIYDYIYGTI 274 (627)
Q Consensus 205 ~~~~~y~i~~~~------~~~~~H-sg~e~--~P~~~~~~lp~L~~li~tp~~H~lHH~~~~-~NYG~~f~~WDrLFGT~ 274 (627)
..-..|.+.+.. ..+... ++-|. .|.. +.. ++-.| +..+.||-.||-..+ .-||..+++.|+..||.
T Consensus 97 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~d~~h~~~~-~~~-~~~~~-~v~~~~h~rh~~~~~~~~~~~~~~~~d~~~~ta 173 (406)
T PRK07424 97 WLGVLYTLTFLFGAIARGLGLPNADELTDLTHLPGP-FET-LPSQW-FVNRPYHWRHHFDNQNAYYCGTFTLVDKLMGTA 173 (406)
T ss_pred hhhhHHHHHHHHHHHHHhcccccccccccccCCCCc-ccC-CCccC-eecCceeEEEEeccccceeeeeEEEeehhcCcc
Confidence 001112221111 111122 11111 1332 222 22334 457899999998864 77899999999999996
Q ss_pred C
Q 006894 275 D 275 (627)
Q Consensus 275 ~ 275 (627)
.
T Consensus 174 ~ 174 (406)
T PRK07424 174 L 174 (406)
T ss_pred c
Confidence 4
No 17
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=96.79 E-value=0.0012 Score=69.88 Aligned_cols=79 Identities=15% Similarity=0.163 Sum_probs=59.4
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCchhhccc--ce--eccc----hhhccHHHhcCCC
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHN--LV--LSTS----YAAHKTEQARAPK 533 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~--lv--~~~~----~~~a~~e~~~a~~ 533 (627)
.=.+|+|||. +||++.|+-|||||.+|.| |++|||+.+++|+.+..... .+ ..++ |++=+.+-...+=
T Consensus 50 ~WAVVTGaTD--GIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~V 127 (312)
T KOG1014|consen 50 SWAVVTGATD--GIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDV 127 (312)
T ss_pred CEEEEECCCC--cchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCce
Confidence 4567889997 9999999999999999999 99999999999988865422 11 2222 2222244577788
Q ss_pred CcEEeeCcCCC
Q 006894 534 GTIFIPYTQIP 544 (627)
Q Consensus 534 G~~~~~~sq~P 544 (627)
|..+--+.|.+
T Consensus 128 gILVNNvG~~~ 138 (312)
T KOG1014|consen 128 GILVNNVGMSY 138 (312)
T ss_pred EEEEecccccC
Confidence 88888777755
No 18
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=96.68 E-value=0.0036 Score=58.51 Aligned_cols=43 Identities=28% Similarity=0.337 Sum_probs=38.2
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCce-EEe--cchhhhHHHHhhC
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~-v~l--~~~~~~~~l~~~~ 507 (627)
..++|+++||. ..|+++|.+|+++|.+ +++ |+.+|.++|.++.
T Consensus 11 ~~~~vlviGaG---g~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~ 56 (135)
T PF01488_consen 11 KGKRVLVIGAG---GAARAVAAALAALGAKEITIVNRTPERAEALAEEF 56 (135)
T ss_dssp TTSEEEEESSS---HHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH
T ss_pred CCCEEEEECCH---HHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc
Confidence 57799999995 7999999999998888 777 9999999998887
No 19
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.39 E-value=0.0096 Score=58.24 Aligned_cols=89 Identities=13% Similarity=0.134 Sum_probs=60.7
Q ss_pred ChhHHHHHHhcCCC--CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCchhhcccceecc-chh
Q 006894 448 SSLAAAVVVNSLPK--TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST-SYA 522 (627)
Q Consensus 448 nsltaavv~~~ip~--~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~lv~~~-~~~ 522 (627)
-+.++.-.++++.. ..++|+|+|+.. -+|..+|++|.++|.+|++ |+. +++++.+.+ .++|.+. +-.
T Consensus 27 ~~~a~v~l~~~~~~~l~gk~vlViG~G~--~~G~~~a~~L~~~g~~V~v~~r~~---~~l~~~l~~---aDiVIsat~~~ 98 (168)
T cd01080 27 TPAGILELLKRYGIDLAGKKVVVVGRSN--IVGKPLAALLLNRNATVTVCHSKT---KNLKEHTKQ---ADIVIVAVGKP 98 (168)
T ss_pred hHHHHHHHHHHcCCCCCCCEEEEECCcH--HHHHHHHHHHhhCCCEEEEEECCc---hhHHHHHhh---CCEEEEcCCCC
Confidence 34455555666653 678999999973 4699999999999999888 443 344433333 3355333 332
Q ss_pred hccHHHhcCCCCcEEeeCcCCCCc
Q 006894 523 AHKTEQARAPKGTIFIPYTQIPPR 546 (627)
Q Consensus 523 ~a~~e~~~a~~G~~~~~~sq~P~~ 546 (627)
. ....+.+++|+.++|.+ +|+.
T Consensus 99 ~-ii~~~~~~~~~viIDla-~prd 120 (168)
T cd01080 99 G-LVKGDMVKPGAVVIDVG-INRV 120 (168)
T ss_pred c-eecHHHccCCeEEEEcc-CCCc
Confidence 3 55566789999999999 8874
No 20
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.06 E-value=0.015 Score=61.47 Aligned_cols=132 Identities=11% Similarity=0.087 Sum_probs=78.4
Q ss_pred cchhhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeEecCCCcccceeecCChhHHHHHHhcCCCCCcEEE
Q 006894 388 LPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVL 467 (627)
Q Consensus 388 ~~~~~~~in~~Ie~Ai~~A~~~G~kv~~LG~ln~~e~ln~~g~~~~~r~p~~L~irvv~Gnsltaavv~~~ip~~~~~V~ 467 (627)
+|.......+.+.+++..|.+- |++|. +| .|.++..+. +-..=|+ .......=-..++-.-++|+
T Consensus 99 lPlp~~i~~~~~ld~I~~aKDV-------dg~n~---~n-~G~l~~~~~---~~~p~T~-~gii~~L~~~~i~l~Gk~vv 163 (283)
T PRK14192 99 HPVPAQIDERACFDAISLAKDV-------DGVTC---LG-FGRMAMGEA---AYGSATP-AGIMRLLKAYNIELAGKHAV 163 (283)
T ss_pred CCCccccCHHHHHhccCHHHhc-------CCCCc---cc-cCccccCCC---cccCCcH-HHHHHHHHHcCCCCCCCEEE
Confidence 3444444455577777555543 56776 45 566554432 2222233 11111111123455677999
Q ss_pred EeccCCChhhHHHHHHHHhccCceEEecchhhhHHHHhhCchhhcccce-eccchhhccHHHhcCCCCcEEeeCc
Q 006894 468 LRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLV-LSTSYAAHKTEQARAPKGTIFIPYT 541 (627)
Q Consensus 468 l~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~lv-~~~~~~~a~~e~~~a~~G~~~~~~s 541 (627)
++|+.| -+|+++|..|.++|..|++-+ .+-++|++.+ .+.++| ..|. .....+.+.+++|++++|+.
T Consensus 164 ViG~gg--~vGkpia~~L~~~gatVtv~~-~~t~~L~~~~---~~aDIvI~AtG-~~~~v~~~~lk~gavViDvg 231 (283)
T PRK14192 164 VVGRSA--ILGKPMAMMLLNANATVTICH-SRTQNLPELV---KQADIIVGAVG-KPELIKKDWIKQGAVVVDAG 231 (283)
T ss_pred EECCcH--HHHHHHHHHHHhCCCEEEEEe-CCchhHHHHh---ccCCEEEEccC-CCCcCCHHHcCCCCEEEEEE
Confidence 999997 899999999999999999811 1334454444 244555 3332 22245567899999999987
No 21
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.94 E-value=0.014 Score=60.57 Aligned_cols=60 Identities=25% Similarity=0.222 Sum_probs=45.6
Q ss_pred ecCChhHHHHHHhcCCCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 445 v~Gnsltaavv~~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
|||-....+.--.......+.|+++|+ | .+|+++|..|++.|.+|++ |+.++.+++.+++
T Consensus 99 TD~~G~~~~l~~~~~~~~~k~vliiGa-G--g~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~ 160 (270)
T TIGR00507 99 TDGIGLVSDLERLIPLRPNQRVLIIGA-G--GAARAVALPLLKADCNVIIANRTVSKAEELAERF 160 (270)
T ss_pred CCHHHHHHHHHhcCCCccCCEEEEEcC-c--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 677777776422122334578999999 6 8999999999999999888 8888888887664
No 22
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=95.93 E-value=0.019 Score=60.06 Aligned_cols=62 Identities=19% Similarity=0.214 Sum_probs=47.6
Q ss_pred eecCChhHHHHHH-hcCCCCCcEEEEeccCCChhhHHHHHHHHhccC-ceEEe--cchhhhHHHHhhCc
Q 006894 444 VVDGSSLAAAVVV-NSLPKTTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 444 vv~Gnsltaavv~-~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~~~ 508 (627)
=|||-...++.-- .......++|+|+|+ | -+|++++.+|++.| .+|++ |+.++.+++++++.
T Consensus 103 NTD~~G~~~~l~~~~~~~~~~k~vlVlGa-G--g~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~ 168 (278)
T PRK00258 103 NTDGIGFVRALEERLGVDLKGKRILILGA-G--GAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG 168 (278)
T ss_pred cccHHHHHHHHHhccCCCCCCCEEEEEcC-c--HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence 4677777766642 223345578999998 6 89999999999998 68888 88999888887653
No 23
>PRK08618 ornithine cyclodeaminase; Validated
Probab=95.88 E-value=0.049 Score=58.32 Aligned_cols=127 Identities=16% Similarity=0.138 Sum_probs=77.5
Q ss_pred cCCcEEEecccccccccc-cCCceeEecCCC-cccceeecCChhHH-------HHHHhcC-CCCCcEEEEeccCCChhhH
Q 006894 409 KGVKVISLGLLNQGEELN-RNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 478 (627)
Q Consensus 409 ~G~kv~~LG~ln~~e~ln-~~g~~~~~r~p~-~L~irvv~Gnslta-------avv~~~i-p~~~~~V~l~Gatg~~kig 478 (627)
.|+|+++-=-=|....+- -.|. .+.-+++ +.-+-+.||+.+|+ |++.+-+ +++.++|.++|+- .+|
T Consensus 64 ~g~K~~~~~p~n~~~glp~~~g~-i~l~d~~tG~p~a~~d~~~lT~~RTaa~sala~~~la~~~~~~v~iiGaG---~~a 139 (325)
T PRK08618 64 LGLKIVSVVPENKKKGKPTIPGT-VILSDFETGEVLAILDGTYLTQIRTGALSGVATKYLAREDAKTLCLIGTG---GQA 139 (325)
T ss_pred EEEEEEeecCCCcccCCCcceEE-EEEEeCCCCceEEEEccchhhhhhHHHHHHHHHHHhcCCCCcEEEEECCc---HHH
Confidence 578887742222211121 1233 4444433 45589999999985 3334555 5678899999998 789
Q ss_pred HHHHHHHhc-cCc-eEEe--cchhhhHHHHhhCchhhcccceeccchh----------------hccHHHhcCCCCcEEe
Q 006894 479 NAVASSLCQ-MGI-KVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA----------------AHKTEQARAPKGTIFI 538 (627)
Q Consensus 479 ~ava~~L~~-~~~-~v~l--~~~~~~~~l~~~~~~~~~~~lv~~~~~~----------------~a~~e~~~a~~G~~~~ 538 (627)
++.+.+|++ +++ +|.+ |++++-+++.+++....+...+...+++ ....+ +++++|++++
T Consensus 140 ~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~aDiVi~aT~s~~p~i~-~~l~~G~hV~ 218 (325)
T PRK08618 140 KGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVVNSADEAIEEADIIVTVTNAKTPVFS-EKLKKGVHIN 218 (325)
T ss_pred HHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEccCCCCcchH-HhcCCCcEEE
Confidence 999998873 454 4444 8889888887655432222211122222 22266 8999999997
Q ss_pred eC
Q 006894 539 PY 540 (627)
Q Consensus 539 ~~ 540 (627)
.+
T Consensus 219 ~i 220 (325)
T PRK08618 219 AV 220 (325)
T ss_pred ec
Confidence 55
No 24
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=95.75 E-value=0.046 Score=62.36 Aligned_cols=81 Identities=10% Similarity=0.109 Sum_probs=54.6
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe---cchhhhHHHHhhCchhhc-ccce-eccchhhcc--HH-HhcCCC
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVEAQ-HNLV-LSTSYAAHK--TE-QARAPK 533 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~~~~~-~~lv-~~~~~~~a~--~e-~~~a~~ 533 (627)
..++|+++||+| +||+.+|+-+++.+.+.++ +++-....++.|+.+..+ .+++ ..-|.++.+ .+ -+..++
T Consensus 249 ~gK~vLVTGagG--SiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kv 326 (588)
T COG1086 249 TGKTVLVTGGGG--SIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKV 326 (588)
T ss_pred CCCEEEEeCCCC--cHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCC
Confidence 478999999999 9999999999987666555 777777777777666432 2233 333555444 11 245566
Q ss_pred CcEEe--eCcCCC
Q 006894 534 GTIFI--PYTQIP 544 (627)
Q Consensus 534 G~~~~--~~sq~P 544 (627)
-++|| -+-|+|
T Consensus 327 d~VfHAAA~KHVP 339 (588)
T COG1086 327 DIVFHAAALKHVP 339 (588)
T ss_pred ceEEEhhhhccCc
Confidence 77777 344566
No 25
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=95.73 E-value=0.021 Score=63.35 Aligned_cols=145 Identities=17% Similarity=0.246 Sum_probs=87.1
Q ss_pred CCCcEEEEeccCCChhhHHHHHHHHhccCc-eEEe--cchhhhHHHHhhCchh-----------hcccce-eccchhhcc
Q 006894 461 KTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVE-----------AQHNLV-LSTSYAAHK 525 (627)
Q Consensus 461 ~~~~~V~l~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~-----------~~~~lv-~~~~~~~a~ 525 (627)
...++|+++|+ | .+|+.++++|...|. +|++ |+.++.+.++++++.. .+.++| ..|+..+..
T Consensus 180 ~~~~~vlViGa-G--~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~aDvVI~aT~s~~~~ 256 (423)
T PRK00045 180 LSGKKVLVIGA-G--EMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGEAIPLDELPEALAEADIVISSTGAPHPI 256 (423)
T ss_pred ccCCEEEEECc-h--HHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCcEeeHHHHHHHhccCCEEEECCCCCCcE
Confidence 35679999998 6 999999999998887 6776 8888888787765421 112333 222211211
Q ss_pred HHHhcC--------CCCcEEeeCcCCCCc---CC--CCCeeEeccCccccCCCccccccccccccchhHHHHHHhHHHh-
Q 006894 526 TEQARA--------PKGTIFIPYTQIPPR---KL--RKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIH- 591 (627)
Q Consensus 526 ~e~~~a--------~~G~~~~~~sq~P~~---~~--R~dc~~~~~p~~~~P~~~~~~~~~e~~~pr~~~~Ac~a~~~~~- 591 (627)
...+++ .++.+++|.+ .|+. +. -+++.+... ++++. .++..+..|.-.+-.|+.||-
T Consensus 257 i~~~~l~~~~~~~~~~~~vviDla-~Prdid~~v~~l~~v~l~~v------Ddl~~--~~~~n~~~r~~~~~~a~~ii~~ 327 (423)
T PRK00045 257 IGKGMVERALKARRHRPLLLVDLA-VPRDIEPEVGELPGVYLYDV------DDLQE--IVEENLAQRQEAAEKAEAIVEE 327 (423)
T ss_pred EcHHHHHHHHhhccCCCeEEEEeC-CCCCCcccccccCCeEEEEH------HHHHH--HHHhhHHHHHHHHHHHHHHHHH
Confidence 111111 3457888888 7744 22 133332211 22221 244566678888899999986
Q ss_pred ---hhcCCCCC-ccch-h--h-hhHHHHHHHHHh
Q 006894 592 ---ALEGWDLN-ECGQ-T--M-CDIHQVWHASLR 617 (627)
Q Consensus 592 ---alEg~~~~-e~G~-i--v-~~i~~i~~aa~k 617 (627)
.++.|... +... | + +++++|-+.-++
T Consensus 328 ~~~~f~~~~~~~~~~p~I~~lr~~~~~i~~~el~ 361 (423)
T PRK00045 328 EVAEFMEWLRSLEVVPTIRALREQAEEIREEELE 361 (423)
T ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 67777554 6666 4 4 677766555443
No 26
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=95.55 E-value=0.048 Score=51.91 Aligned_cols=76 Identities=16% Similarity=0.128 Sum_probs=54.8
Q ss_pred cCCCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCchhhcccceeccchhhccHHHhcCCCCc
Q 006894 458 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTEQARAPKGT 535 (627)
Q Consensus 458 ~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~lv~~~~~~~a~~e~~~a~~G~ 535 (627)
+++-..++|.++|.+. .+|+.+|..|.++|..|++ ++...++ +. -++.++|-+..-.....+.++++||+
T Consensus 23 ~~~~~gk~v~VvGrs~--~vG~pla~lL~~~gatV~~~~~~t~~l~---~~---v~~ADIVvsAtg~~~~i~~~~ikpGa 94 (140)
T cd05212 23 GVRLDGKKVLVVGRSG--IVGAPLQCLLQRDGATVYSCDWKTIQLQ---SK---VHDADVVVVGSPKPEKVPTEWIKPGA 94 (140)
T ss_pred CCCCCCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEeCCCCcCHH---HH---HhhCCEEEEecCCCCccCHHHcCCCC
Confidence 4455788999999998 9999999999999999999 2222222 11 23344443222222457899999999
Q ss_pred EEeeCc
Q 006894 536 IFIPYT 541 (627)
Q Consensus 536 ~~~~~s 541 (627)
+++|+.
T Consensus 95 ~Vidvg 100 (140)
T cd05212 95 TVINCS 100 (140)
T ss_pred EEEEcC
Confidence 999998
No 27
>PRK06196 oxidoreductase; Provisional
Probab=95.48 E-value=0.027 Score=59.23 Aligned_cols=55 Identities=16% Similarity=0.132 Sum_probs=44.2
Q ss_pred HHHHHHhcCCCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 451 AAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 451 taavv~~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
++..+++.++...+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 14 ~~~~~~~~~~l~~k~vlITGasg--gIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l 70 (315)
T PRK06196 14 TAEEVLAGHDLSGKTAIVTGGYS--GLGLETTRALAQAGAHVIVPARRPDVAREALAGI 70 (315)
T ss_pred cHHHHhcCCCCCCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 34555666655557899999998 9999999999999999998 8888777665554
No 28
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=95.40 E-value=0.077 Score=56.46 Aligned_cols=123 Identities=13% Similarity=0.043 Sum_probs=80.5
Q ss_pred cCCcEEEecccccccccccCCceeEecCCC-cccceeecCChhHH-------HHHHhcCCCCCcEEEEeccCCChhhHHH
Q 006894 409 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSLPKTTAHVLLRGTVTANKVANA 480 (627)
Q Consensus 409 ~G~kv~~LG~ln~~e~ln~~g~~~~~r~p~-~L~irvv~Gnslta-------avv~~~ip~~~~~V~l~Gatg~~kig~a 480 (627)
.|+|+++-+ . |+-.++.+--+|+ +.-.-+.||+.+|+ |+..+-..++.+.+.++|+- ..|+.
T Consensus 62 ~g~K~~~~~---~----~~~~g~v~L~d~~TG~p~Almd~~~lT~~RTaA~salaa~~l~~da~~l~iiGaG---~QA~~ 131 (301)
T PRK06407 62 AGLKTYIAG---R----NGARFVVLLFDVNNPELVAIFEANRLGQIRTGAVTAYATSILHKNVENFTIIGSG---FQAET 131 (301)
T ss_pred eEEEEEecC---C----CCccEEEEEEECCCCCEEEEEccchHHHHHHHHHHHHHHHHhhcCCcEEEEECCc---HHHHH
Confidence 577776642 1 2222234444444 34479999999986 45556566788999999987 89999
Q ss_pred HHHHHh--ccCceEEe--cchhhhHHHHhhCchhhcccceeccchhhc----c------------HHHhcCCCCcEEeeC
Q 006894 481 VASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAH----K------------TEQARAPKGTIFIPY 540 (627)
Q Consensus 481 va~~L~--~~~~~v~l--~~~~~~~~l~~~~~~~~~~~lv~~~~~~~a----~------------~e~~~a~~G~~~~~~ 540 (627)
-++++| +.-.+|.+ |++++-+++.+++.+..+..+.-+.+.++| + .+.++++||+++..+
T Consensus 132 ~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v~~~~~~~eav~~aDIV~taT~s~~P~~~~~~l~pg~hV~ai 211 (301)
T PRK06407 132 QLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDIRPVDNAEAALRDADTITSITNSDTPIFNRKYLGDEYHVNLA 211 (301)
T ss_pred HHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCCcEecHHHcCCCceEEec
Confidence 999999 34455555 999998888877665433232222333332 2 456788999998865
Q ss_pred c
Q 006894 541 T 541 (627)
Q Consensus 541 s 541 (627)
-
T Consensus 212 G 212 (301)
T PRK06407 212 G 212 (301)
T ss_pred C
Confidence 3
No 29
>PLN02780 ketoreductase/ oxidoreductase
Probab=95.37 E-value=0.018 Score=61.19 Aligned_cols=45 Identities=16% Similarity=0.248 Sum_probs=40.2
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 509 (627)
.+.|+++||+| -||+++|+.|+++|.+|.+ |++++++++++++.+
T Consensus 53 g~~~lITGAs~--GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~ 99 (320)
T PLN02780 53 GSWALVTGPTD--GIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQS 99 (320)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH
Confidence 46789999997 9999999999999999998 999999998877654
No 30
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=95.21 E-value=0.083 Score=49.41 Aligned_cols=61 Identities=25% Similarity=0.310 Sum_probs=44.0
Q ss_pred ecCChhHHHHHHhcCCCCCcEEEEeccCCChhhHHHHHHHHhccC-ceEEe--cchhhhHHHHhhCc
Q 006894 445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 445 v~Gnsltaavv~~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~~~ 508 (627)
|||-.+..|.--..+....++|.++|+ | .+|+++++.|++.| .+|.+ |+.++.+++++++.
T Consensus 1 td~~g~~~a~~~~~~~~~~~~i~iiG~-G--~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~ 64 (155)
T cd01065 1 TDGLGFVRALEEAGIELKGKKVLILGA-G--GAARAVAYALAELGAAKIVIVNRTLEKAKALAERFG 64 (155)
T ss_pred CCHHHHHHHHHhhCCCCCCCEEEEECC-c--HHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHh
Confidence 344445555444444455678999998 7 99999999999885 67777 88888777766543
No 31
>PRK06046 alanine dehydrogenase; Validated
Probab=95.19 E-value=0.11 Score=55.73 Aligned_cols=131 Identities=17% Similarity=0.212 Sum_probs=80.0
Q ss_pred HcCCcEEEecccccccccccCCceeEecCCC-cccceeecCChhHH-------HHHHhcC-CCCCcEEEEeccCCChhhH
Q 006894 408 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 478 (627)
Q Consensus 408 ~~G~kv~~LG~ln~~e~ln~~g~~~~~r~p~-~L~irvv~Gnslta-------avv~~~i-p~~~~~V~l~Gatg~~kig 478 (627)
..|+|+++.--=|..+.+..-.++.+--+++ +.-.-+.||+.+|+ |+..+-+ +++.+.|.++|+- ..|
T Consensus 65 ~~g~K~~~~~p~N~~~glp~~~g~i~L~d~~tG~p~aild~~~lT~~RTaA~sala~~~La~~~~~~vgiiG~G---~qa 141 (326)
T PRK06046 65 IAGVKIVNVHPGNPDRGLPTVMAVIILNSPETGFPLAIMDGTYLTDMRTGAAGGVAAKYLARKDSKVVGIIGAG---NQA 141 (326)
T ss_pred eEEEEEEeeCCCCcccCCCceeEEEEEEeCCCCceEEEEcCccHHHHHHHHHHHHHHHHhCCCCCCEEEEECCc---HHH
Confidence 3678887754333322222222334444433 34479999999985 2333555 6788899999987 789
Q ss_pred HHHHHHHhc-cCceEEe---cchhhhHHHHhhCchhhcccceeccchhhc---c------------HHHhcCCCCcEEee
Q 006894 479 NAVASSLCQ-MGIKVAT---ICKDDYEKLKLRIPVEAQHNLVLSTSYAAH---K------------TEQARAPKGTIFIP 539 (627)
Q Consensus 479 ~ava~~L~~-~~~~v~l---~~~~~~~~l~~~~~~~~~~~lv~~~~~~~a---~------------~e~~~a~~G~~~~~ 539 (627)
++.++.|++ ++++... |++++.+++++++.+..+..+....+++++ + .+.+++++|+++..
T Consensus 142 ~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~aDiVv~aTps~~P~~~~~~l~~g~hV~~ 221 (326)
T PRK06046 142 RTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTVAEDIEEACDCDILVTTTPSRKPVVKAEWIKEGTHINA 221 (326)
T ss_pred HHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhhCCEEEEecCCCCcEecHHHcCCCCEEEe
Confidence 999999993 4555554 888888888877643322221112233322 2 34567788888775
Q ss_pred Cc
Q 006894 540 YT 541 (627)
Q Consensus 540 ~s 541 (627)
+.
T Consensus 222 iG 223 (326)
T PRK06046 222 IG 223 (326)
T ss_pred cC
Confidence 54
No 32
>PRK06949 short chain dehydrogenase; Provisional
Probab=95.18 E-value=0.034 Score=55.76 Aligned_cols=47 Identities=21% Similarity=0.246 Sum_probs=40.5
Q ss_pred CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 460 p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
+...+.|+++|++| -||+++|+.|+++|.+|.+ |++++++++++++.
T Consensus 6 ~~~~k~ilItGasg--~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~ 54 (258)
T PRK06949 6 NLEGKVALVTGASS--GLGARFAQVLAQAGAKVVLASRRVERLKELRAEIE 54 (258)
T ss_pred CCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 34457999999998 9999999999999999988 88888888877653
No 33
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=95.15 E-value=0.12 Score=55.42 Aligned_cols=131 Identities=18% Similarity=0.150 Sum_probs=82.0
Q ss_pred HcCCcEEEecccccccccccCCceeEecCCC-cccceeecCChhHH-------HHHHhcC-CCCCcEEEEeccCCChhhH
Q 006894 408 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 478 (627)
Q Consensus 408 ~~G~kv~~LG~ln~~e~ln~~g~~~~~r~p~-~L~irvv~Gnslta-------avv~~~i-p~~~~~V~l~Gatg~~kig 478 (627)
-.|+|+++.--=|....|..-.++.+--++. +.-+-+.||+.+|+ |+..+-+ +++.++|.++|+- ..|
T Consensus 64 ~~g~K~v~~~p~N~~~glp~~~g~i~L~d~~tG~p~ai~d~~~lT~~RTaA~salaa~~La~~~~~~lgiiG~G---~qA 140 (325)
T TIGR02371 64 MAGVKCVNVHPGNPDRHLPTVMALIILVSPETGFPIALMDGTYITDMRTGAAGGVAAKYLARKDSSVLGIIGAG---RQA 140 (325)
T ss_pred eEEEEEEeecCCchhcCCCcceEEEEEeeCCCCCeEEEEeCcchhhHHHHHHHHHHHHHhCCCCCCEEEEECCC---HHH
Confidence 4688888753323222222223344444544 35589999999985 2333545 6678899999987 899
Q ss_pred HHHHHHHh--ccCceEEe--cchhhhHHHHhhCchhhcccceeccchhhc----c------------HHHhcCCCCcEEe
Q 006894 479 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAH----K------------TEQARAPKGTIFI 538 (627)
Q Consensus 479 ~ava~~L~--~~~~~v~l--~~~~~~~~l~~~~~~~~~~~lv~~~~~~~a----~------------~e~~~a~~G~~~~ 538 (627)
++-+++|+ +...+|.+ |++++.+.+.+++.+ .+..+..+.+.+++ + .+.++++||++++
T Consensus 141 ~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~-~g~~v~~~~~~~eav~~aDiVitaT~s~~P~~~~~~l~~g~~v~ 219 (325)
T TIGR02371 141 WTQLEALSRVFDLEEVSVYCRTPSTREKFALRASD-YEVPVRAATDPREAVEGCDILVTTTPSRKPVVKADWVSEGTHIN 219 (325)
T ss_pred HHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHh-hCCcEEEeCCHHHHhccCCEEEEecCCCCcEecHHHcCCCCEEE
Confidence 99888887 45666766 999998888776542 11111112233222 2 3467899999998
Q ss_pred eCcC
Q 006894 539 PYTQ 542 (627)
Q Consensus 539 ~~sq 542 (627)
.+..
T Consensus 220 ~vGs 223 (325)
T TIGR02371 220 AIGA 223 (325)
T ss_pred ecCC
Confidence 7763
No 34
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=95.10 E-value=0.067 Score=57.15 Aligned_cols=130 Identities=18% Similarity=0.089 Sum_probs=74.7
Q ss_pred HcCCcEEEecccccccccccCCceeEecCCC-cccceeecCChhHH-------HHHHhcC-CCCCcEEEEeccCCChhhH
Q 006894 408 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 478 (627)
Q Consensus 408 ~~G~kv~~LG~ln~~e~ln~~g~~~~~r~p~-~L~irvv~Gnslta-------avv~~~i-p~~~~~V~l~Gatg~~kig 478 (627)
-.|+|+++.--=|....+..--++.+--++. +.-+.+.||+.+|+ |+..+-+ |++.+.+.++|+- ..|
T Consensus 64 ~~gvK~v~~~p~N~~~glP~~~g~i~L~D~~TG~p~ai~dg~~lT~~RTaA~sala~~~La~~~~~~l~viGaG---~QA 140 (313)
T PF02423_consen 64 VAGVKWVSVFPGNPKRGLPSIQGVILLFDPETGEPLAIMDGTWLTALRTAAVSALAARYLARPDARTLGVIGAG---VQA 140 (313)
T ss_dssp EEEEEEEEEETTCGGGTSSSEEEEEEEEETTT--EEEEEESHHHHHHHHHHHHHHHHHHHS-TT--EEEEE--S---HHH
T ss_pred EEEEEEEEecCCccccCCCceeEEEEEEECCCCCEEEEecccchhhhHHHHHHHHHHHHhCcCCCceEEEECCC---HHH
Confidence 5788888854434433333222334444433 34478999999985 3333333 6778899999987 999
Q ss_pred HHHHHHHhc-c-CceEEe--cchhhhHHHHhhCchhhcccceeccchhhcc------------------HHHhcCCCCcE
Q 006894 479 NAVASSLCQ-M-GIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHK------------------TEQARAPKGTI 536 (627)
Q Consensus 479 ~ava~~L~~-~-~~~v~l--~~~~~~~~l~~~~~~~~~~~lv~~~~~~~a~------------------~e~~~a~~G~~ 536 (627)
+.-+++|++ + -.+|.+ |++++-+++.+++.. .+..++.+.+.++|. .+.++++||++
T Consensus 141 ~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~-~~~~v~~~~~~~~av~~aDii~taT~s~~~~P~~~~~~l~~g~h 219 (313)
T PF02423_consen 141 RWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRD-LGVPVVAVDSAEEAVRGADIIVTATPSTTPAPVFDAEWLKPGTH 219 (313)
T ss_dssp HHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHC-CCTCEEEESSHHHHHTTSSEEEE----SSEEESB-GGGS-TT-E
T ss_pred HHHHHHHHHhCCceEEEEEccChhHHHHHHHhhcc-ccccceeccchhhhcccCCEEEEccCCCCCCccccHHHcCCCcE
Confidence 999999993 4 444555 999999999888766 344433444544443 22366667766
Q ss_pred EeeCc
Q 006894 537 FIPYT 541 (627)
Q Consensus 537 ~~~~s 541 (627)
++.+.
T Consensus 220 i~~iG 224 (313)
T PF02423_consen 220 INAIG 224 (313)
T ss_dssp EEE-S
T ss_pred EEEec
Confidence 66443
No 35
>PRK07340 ornithine cyclodeaminase; Validated
Probab=95.09 E-value=0.13 Score=54.74 Aligned_cols=97 Identities=14% Similarity=0.130 Sum_probs=66.3
Q ss_pred cCCcEEEecccccccccccCCceeEecCCC-cccceeecCChhHH-------HHHHhcC-CCCCcEEEEeccCCChhhHH
Q 006894 409 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN 479 (627)
Q Consensus 409 ~G~kv~~LG~ln~~e~ln~~g~~~~~r~p~-~L~irvv~Gnslta-------avv~~~i-p~~~~~V~l~Gatg~~kig~ 479 (627)
.|+|+++.--=|..+.|..--++.+--++. +.-.-+.||+.+|+ |+..+-+ +++.++|.++|+- ..|+
T Consensus 62 ~g~K~~~~~p~N~~~glp~~~g~i~l~d~~tG~p~a~~d~~~lT~~RTaA~sala~~~La~~~~~~v~IiGaG---~qa~ 138 (304)
T PRK07340 62 AITKLVTVCPGNAARGLPTIQGEVVVADAATGERLFLLDGPTVTGRRTAAVSLLAARTLAPAPPGDLLLIGTG---VQAR 138 (304)
T ss_pred cEEEEEEeCCCCccCCCCcceEEEEEEECCCCcEEEEEcChhHHHHHHHHHHHHHHHHhCCCCCCEEEEECCc---HHHH
Confidence 588887743323322232223345554544 45589999999985 3444555 5678899999994 8999
Q ss_pred HHHHHHhc-cC-ceEEe--cchhhhHHHHhhCc
Q 006894 480 AVASSLCQ-MG-IKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 480 ava~~L~~-~~-~~v~l--~~~~~~~~l~~~~~ 508 (627)
+.+++||. ++ .++.+ |++++-+++.+++.
T Consensus 139 ~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~ 171 (304)
T PRK07340 139 AHLEAFAAGLPVRRVWVRGRTAASAAAFCAHAR 171 (304)
T ss_pred HHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHH
Confidence 99999984 55 45666 99899888887764
No 36
>PRK05867 short chain dehydrogenase; Provisional
Probab=95.05 E-value=0.03 Score=56.41 Aligned_cols=46 Identities=28% Similarity=0.313 Sum_probs=39.8
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 509 (627)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++..
T Consensus 8 ~~k~vlVtGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~ 55 (253)
T PRK05867 8 HGKRALITGAST--GIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGT 55 (253)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 457899999998 9999999999999999998 888888888776543
No 37
>PRK06141 ornithine cyclodeaminase; Validated
Probab=95.05 E-value=0.14 Score=54.59 Aligned_cols=131 Identities=21% Similarity=0.169 Sum_probs=79.8
Q ss_pred HcCCcEEEecccccccccccCCceeEecCCC-cccceeecCChhHH-------HHHHhcC-CCCCcEEEEeccCCChhhH
Q 006894 408 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 478 (627)
Q Consensus 408 ~~G~kv~~LG~ln~~e~ln~~g~~~~~r~p~-~L~irvv~Gnslta-------avv~~~i-p~~~~~V~l~Gatg~~kig 478 (627)
-.|+|+++---=|....+-.--++.+--+++ +.-+-+.||+.+|+ |+..+-+ +++.++|.++|+ | ..|
T Consensus 61 ~~g~K~~~~~p~N~~~glp~~~g~v~l~d~~tG~p~ai~d~~~lT~~RTaa~sala~~~La~~~~~~v~iiG~-G--~~a 137 (314)
T PRK06141 61 YIGVKAVTVFPGNPARGLPGLHSTYLLFDGRTGEPLALVDGTELTARRTAAASALAASYLARKDASRLLVVGT-G--RLA 137 (314)
T ss_pred eeEEEEEeecCCCCcCCCCceEEEEEEEECCCCCEEEEEcCcchhcchhHHHHHHHHHHhCCCCCceEEEECC-c--HHH
Confidence 3588988843323222222222334444544 35589999999985 2333333 567889999996 5 999
Q ss_pred HHHHHHHhc-c-CceEEe--cchhhhHHHHhhCchh--------------hcccce-eccchhhccHHHhcCCCCcEEee
Q 006894 479 NAVASSLCQ-M-GIKVAT--ICKDDYEKLKLRIPVE--------------AQHNLV-LSTSYAAHKTEQARAPKGTIFIP 539 (627)
Q Consensus 479 ~ava~~L~~-~-~~~v~l--~~~~~~~~l~~~~~~~--------------~~~~lv-~~~~~~~a~~e~~~a~~G~~~~~ 539 (627)
+.++++++. + ..+|.+ |++++-+++.+++.+. .+.++| ..|+-.+...+.++++||++++-
T Consensus 138 ~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~~~~~av~~aDIVi~aT~s~~pvl~~~~l~~g~~i~~ 217 (314)
T PRK06141 138 SLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVTDLEAAVRQADIISCATLSTEPLVRGEWLKPGTHLDL 217 (314)
T ss_pred HHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeCCHHHHHhcCCEEEEeeCCCCCEecHHHcCCCCEEEe
Confidence 999998884 4 466777 8889988888775321 122222 12222222234578889987774
Q ss_pred Cc
Q 006894 540 YT 541 (627)
Q Consensus 540 ~s 541 (627)
..
T Consensus 218 ig 219 (314)
T PRK06141 218 VG 219 (314)
T ss_pred eC
Confidence 44
No 38
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=94.96 E-value=0.04 Score=63.48 Aligned_cols=59 Identities=19% Similarity=0.363 Sum_probs=47.8
Q ss_pred CChhHHHHHHhcCCC-----CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 447 GSSLAAAVVVNSLPK-----TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 447 Gnsltaavv~~~ip~-----~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
|.+.....+.+.+|+ +.+.|+|+||+| .||+++++.|+++|.+|.+ |+.++.+.+.+++
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~gKvVLVTGATG--gIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l 124 (576)
T PLN03209 59 GATKFSSAAIEAIPKELDTKDEDLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSV 124 (576)
T ss_pred cchhhhhhhhhccccccccCCCCEEEEECCCC--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Confidence 555666677777775 356899999999 9999999999999999987 8888887766543
No 39
>PRK06101 short chain dehydrogenase; Provisional
Probab=94.90 E-value=0.038 Score=55.44 Aligned_cols=41 Identities=17% Similarity=0.313 Sum_probs=36.4
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 506 (627)
+.|+++|++| -||+++|+.|+++|.+|.+ |++++.++++++
T Consensus 2 ~~vlItGas~--giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~ 44 (240)
T PRK06101 2 TAVLITGATS--GIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ 44 (240)
T ss_pred cEEEEEcCCc--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh
Confidence 5689999998 9999999999999999988 888888877654
No 40
>PRK08265 short chain dehydrogenase; Provisional
Probab=94.90 E-value=0.038 Score=56.25 Aligned_cols=44 Identities=25% Similarity=0.307 Sum_probs=38.7
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
.+.|+++|++| -||+++|+.|+++|.+|++ |+.++.+++.+++.
T Consensus 6 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 51 (261)
T PRK08265 6 GKVAIVTGGAT--LIGAAVARALVAAGARVAIVDIDADNGAAVAASLG 51 (261)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence 46899999998 9999999999999999998 88888888877663
No 41
>PRK06482 short chain dehydrogenase; Provisional
Probab=94.88 E-value=0.041 Score=56.19 Aligned_cols=42 Identities=21% Similarity=0.290 Sum_probs=37.0
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
++|+|+|++| -||+++|+.|+++|.+|.+ |++++.++++++.
T Consensus 3 k~vlVtGasg--~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~ 46 (276)
T PRK06482 3 KTWFITGASS--GFGRGMTERLLARGDRVAATVRRPDALDDLKARY 46 (276)
T ss_pred CEEEEecCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc
Confidence 5799999998 9999999999999999988 8888888776654
No 42
>PLN00203 glutamyl-tRNA reductase
Probab=94.86 E-value=0.11 Score=59.36 Aligned_cols=202 Identities=18% Similarity=0.250 Sum_probs=111.5
Q ss_pred HHHHHHHHHHHHHHcCCcEEEec-ccccccccccCCceeEecCCCcccceeecCChhHHHHHHh----cCCC---CCcEE
Q 006894 395 INSLIEEAILEADAKGVKVISLG-LLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVN----SLPK---TTAHV 466 (627)
Q Consensus 395 in~~Ie~Ai~~A~~~G~kv~~LG-~ln~~e~ln~~g~~~~~r~p~~L~irvv~Gnsltaavv~~----~ip~---~~~~V 466 (627)
|-.+|-+|...|++.|.- | .||.- -...+.+.|.-. =+.++-.|..=.+.++++ ..+. ..++|
T Consensus 199 IlgQVK~A~~~A~~~g~~----g~~L~~L----F~~Ai~~~KrVR-teT~I~~~~vSv~s~Av~la~~~~~~~~l~~kkV 269 (519)
T PLN00203 199 ILAQVKQVVKVGQGVDGF----GRNLSGL----FKHAITAGKRVR-TETNIASGAVSVSSAAVELALMKLPESSHASARV 269 (519)
T ss_pred HHHHHHHHHHHHHHcCCc----cHHHHHH----HHHHHHHHHHHh-hccCCCCCCcCHHHHHHHHHHHhcCCCCCCCCEE
Confidence 456688899999888752 2 12211 000112222211 112444444322323222 2232 36899
Q ss_pred EEeccCCChhhHHHHHHHHhccCc-eEEe--cchhhhHHHHhhCch---------h-----hcccce-eccchhhcc--H
Q 006894 467 LLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPV---------E-----AQHNLV-LSTSYAAHK--T 526 (627)
Q Consensus 467 ~l~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~---------~-----~~~~lv-~~~~~~~a~--~ 526 (627)
+|+|+ | ++|+++++.|+.+|. +|++ |+.++.+.++++.+. + .+.++| ..|+-.... .
T Consensus 270 lVIGA-G--~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~dl~~al~~aDVVIsAT~s~~pvI~~ 346 (519)
T PLN00203 270 LVIGA-G--KMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLDEMLACAAEADVVFTSTSSETPLFLK 346 (519)
T ss_pred EEEeC-H--HHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhhHHHHHhcCCEEEEccCCCCCeeCH
Confidence 99999 6 999999999998886 5777 888999888876531 0 122333 222111111 1
Q ss_pred -HHhcCCC-------CcEEeeCcCCCCc-C--CC--CCeeEeccCccccCCCccccccccccccchhHHHHHHhHHHh--
Q 006894 527 -EQARAPK-------GTIFIPYTQIPPR-K--LR--KDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIH-- 591 (627)
Q Consensus 527 -e~~~a~~-------G~~~~~~sq~P~~-~--~R--~dc~~~~~p~~~~P~~~~~~~~~e~~~pr~~~~Ac~a~~~~~-- 591 (627)
.-+.+++ ...|+|.+ +|+. + .. +++.+.+. ++++. .++-.+..|.-.+=.|+.||-
T Consensus 347 e~l~~~~~~~~~~~~~~~~IDLA-vPRdIdp~v~~l~~v~lydi------DdL~~--i~~~n~~~R~~~~~~Ae~II~ee 417 (519)
T PLN00203 347 EHVEALPPASDTVGGKRLFVDIS-VPRNVGACVSELESARVYNV------DDLKE--VVAANKEDRLRKAMEAQTIIREE 417 (519)
T ss_pred HHHHHhhhcccccCCCeEEEEeC-CCCCCccccccCCCCeEEEe------ccHHH--HHHHhHHHHHHHHHHHHHHHHHH
Confidence 1222322 25899999 8854 2 21 23333222 33332 245566777766777777775
Q ss_pred --hhcCCCCC-ccch-h--h-hhHHHHHHHHHh
Q 006894 592 --ALEGWDLN-ECGQ-T--M-CDIHQVWHASLR 617 (627)
Q Consensus 592 --alEg~~~~-e~G~-i--v-~~i~~i~~aa~k 617 (627)
.++.|... +... | + ++.+.|-+.-++
T Consensus 418 ~~~F~~w~~~~~~~p~I~~lr~~~~~i~~~Ele 450 (519)
T PLN00203 418 SKNFEAWRDSLETVPTIKKLRSYAERIRAAELE 450 (519)
T ss_pred HHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 78888766 6777 5 4 677776655433
No 43
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=94.85 E-value=0.039 Score=52.72 Aligned_cols=35 Identities=26% Similarity=0.307 Sum_probs=32.5
Q ss_pred EEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHH
Q 006894 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 502 (627)
Q Consensus 466 V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~ 502 (627)
|+|+|||| .+|+.+++.|.++|.+|.. |++++.++
T Consensus 1 I~V~GatG--~vG~~l~~~L~~~~~~V~~~~R~~~~~~~ 37 (183)
T PF13460_consen 1 ILVFGATG--FVGRALAKQLLRRGHEVTALVRSPSKAED 37 (183)
T ss_dssp EEEETTTS--HHHHHHHHHHHHTTSEEEEEESSGGGHHH
T ss_pred eEEECCCC--hHHHHHHHHHHHCCCEEEEEecCchhccc
Confidence 78999999 9999999999999999998 88887776
No 44
>PRK06823 ornithine cyclodeaminase; Validated
Probab=94.83 E-value=0.18 Score=54.10 Aligned_cols=129 Identities=16% Similarity=0.046 Sum_probs=79.5
Q ss_pred cCCcEEEecccccccccccCCceeEecCCC-cccceee-cCChhHH-------HHHHhcC-CCCCcEEEEeccCCChhhH
Q 006894 409 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVV-DGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 478 (627)
Q Consensus 409 ~G~kv~~LG~ln~~e~ln~~g~~~~~r~p~-~L~irvv-~Gnslta-------avv~~~i-p~~~~~V~l~Gatg~~kig 478 (627)
.|+|+++.--=|....+-.--++.+.-+|. +.-+-+. ||+.+|+ |+..+-+ +++.+++.++|+- ..|
T Consensus 64 ~g~K~v~~~p~N~~~glP~~~g~v~l~d~~TG~p~Ail~d~~~lT~~RTaA~sala~~~La~~d~~~l~iiG~G---~qA 140 (315)
T PRK06823 64 FVVKVSTGFYDNPAQGLPSNQGLMLAFSAKTGEPQALLLDEGWLTALRTALAGRIVARLLAPQHVSAIGIVGTG---IQA 140 (315)
T ss_pred EEEEEEeecCCCccCCCCCeeEEEEEEECCCCceEEEEcCCChHHHHHHHHHHHHHHHHhcCCCCCEEEEECCc---HHH
Confidence 567777643323322222222234444544 2336675 9999975 3334445 6788899999987 899
Q ss_pred HHHHHHHh--ccCceEEe--cchhhhHHHHhhCchhhcccceeccchhhc----c------------HHHhcCCCCcEEe
Q 006894 479 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAH----K------------TEQARAPKGTIFI 538 (627)
Q Consensus 479 ~ava~~L~--~~~~~v~l--~~~~~~~~l~~~~~~~~~~~lv~~~~~~~a----~------------~e~~~a~~G~~~~ 538 (627)
+.-++++| +.-.+|.+ |++++-+++++++.+. +.++..+.+.++| + .+.++++||+++.
T Consensus 141 ~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~-~~~v~~~~~~~~av~~ADIV~taT~s~~P~~~~~~l~~G~hi~ 219 (315)
T PRK06823 141 RMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQAL-GFAVNTTLDAAEVAHAANLIVTTTPSREPLLQAEDIQPGTHIT 219 (315)
T ss_pred HHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhc-CCcEEEECCHHHHhcCCCEEEEecCCCCceeCHHHcCCCcEEE
Confidence 99999999 45566666 9999988887665431 2222122233322 2 4568899999988
Q ss_pred eCc
Q 006894 539 PYT 541 (627)
Q Consensus 539 ~~s 541 (627)
.+.
T Consensus 220 ~iG 222 (315)
T PRK06823 220 AVG 222 (315)
T ss_pred ecC
Confidence 664
No 45
>PRK05854 short chain dehydrogenase; Provisional
Probab=94.82 E-value=0.034 Score=58.64 Aligned_cols=45 Identities=16% Similarity=0.147 Sum_probs=38.9
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 509 (627)
.+.|+++|+++ -||+++|+.|+++|.+|.+ |+.++.++..+++.+
T Consensus 14 gk~~lITGas~--GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~ 60 (313)
T PRK05854 14 GKRAVVTGASD--GLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRT 60 (313)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 46899999997 9999999999999999998 988888877766543
No 46
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.79 E-value=0.055 Score=57.37 Aligned_cols=153 Identities=20% Similarity=0.233 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeEec-CCCcccc----------eeecCC-
Q 006894 393 EAINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLER-QPNKLKI----------KVVDGS- 448 (627)
Q Consensus 393 ~~in~~Ie~Ai~~A~~~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~r-~p~~L~i----------rvv~Gn- 448 (627)
.+-+.-+..-.+.|++.|++.. -|. .++..+++|.|. ++.++. -|++++. +=|||=
T Consensus 44 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIivq~Plp~~i~~~~i~~~I~p~KDVDGl~ 123 (286)
T PRK14175 44 GASQSYVRSKKKAAEKIGMISEIVHLEETATEEEVLNELNRLNNDDSVSGILVQVPLPKQVSEQKILEAINPEKDVDGFH 123 (286)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCC
Confidence 3444556666777888888764 333 233346677773 333331 1222321 123332
Q ss_pred ---------------hhHHHHHHhcCC-----CCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh
Q 006894 449 ---------------SLAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (627)
Q Consensus 449 ---------------sltaavv~~~ip-----~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 506 (627)
.-|++.|++-+. -.-++|+++|+.+ -||+.+|..|.++|..|++ ++.+ +|++.
T Consensus 124 ~~n~g~l~~~~~~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~--~VG~pla~lL~~~gatVtv~~s~t~---~l~~~ 198 (286)
T PRK14175 124 PINIGKLYIDEQTFVPCTPLGIMEILKHADIDLEGKNAVVIGRSH--IVGQPVSKLLLQKNASVTILHSRSK---DMASY 198 (286)
T ss_pred ccchHhHhcCCCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCc--hhHHHHHHHHHHCCCeEEEEeCCch---hHHHH
Confidence 236666665443 3578999999996 7999999999999999999 3332 22222
Q ss_pred CchhhcccceeccchhhccHHHhcCCCCcEEeeCcCCCCc---CCCCCeeE
Q 006894 507 IPVEAQHNLVLSTSYAAHKTEQARAPKGTIFIPYTQIPPR---KLRKDCFY 554 (627)
Q Consensus 507 ~~~~~~~~lv~~~~~~~a~~e~~~a~~G~~~~~~sq~P~~---~~R~dc~~ 554 (627)
+ ++.++|.+.--.......++.++|++++|+. .|+. ++-.||-+
T Consensus 199 ~---~~ADIVIsAvg~p~~i~~~~vk~gavVIDvG-i~~~~~gkl~GDvd~ 245 (286)
T PRK14175 199 L---KDADVIVSAVGKPGLVTKDVVKEGAVIIDVG-NTPDENGKLKGDVDY 245 (286)
T ss_pred H---hhCCEEEECCCCCcccCHHHcCCCcEEEEcC-CCcCCCCCeecCccH
Confidence 2 3334443332222234456899999999999 6652 44477765
No 47
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=94.75 E-value=0.09 Score=55.47 Aligned_cols=61 Identities=16% Similarity=0.201 Sum_probs=43.2
Q ss_pred ecCChhHHHHHHhcCCCCCcEEEEeccCCChhhHHHHHHHHhccCce-EEe--cch---hhhHHHHhhCc
Q 006894 445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICK---DDYEKLKLRIP 508 (627)
Q Consensus 445 v~Gnsltaavv~~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~~~-v~l--~~~---~~~~~l~~~~~ 508 (627)
|||.-+..+.--.......++|+++|| | -+|+|+|..|++.|.+ |.+ |+. ++.+++.+++.
T Consensus 108 TD~~G~~~~l~~~~~~~~~k~vlI~GA-G--GagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~ 174 (289)
T PRK12548 108 TDGLGFVRNLREHGVDVKGKKLTVIGA-G--GAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIK 174 (289)
T ss_pred cCHHHHHHHHHhcCCCcCCCEEEEECC-c--HHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHh
Confidence 556555555432333334578999999 5 7899999999999986 877 775 67777766653
No 48
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=94.74 E-value=0.045 Score=55.14 Aligned_cols=45 Identities=20% Similarity=0.213 Sum_probs=38.4
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
..++|+++|++| .||+++|+.|+++|.+|.+ |++++.+++.+++.
T Consensus 9 ~~k~vlItGa~g--~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~ 55 (255)
T PRK07523 9 TGRRALVTGSSQ--GIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLK 55 (255)
T ss_pred CCCEEEEECCcc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence 346899999998 9999999999999999998 88887777766554
No 49
>PRK07063 short chain dehydrogenase; Provisional
Probab=94.73 E-value=0.039 Score=55.70 Aligned_cols=45 Identities=20% Similarity=0.226 Sum_probs=39.5
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 509 (627)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++..
T Consensus 7 ~k~vlVtGas~--gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~ 53 (260)
T PRK07063 7 GKVALVTGAAQ--GIGAAIARAFAREGAAVALADLDAALAERAAAAIAR 53 (260)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 46799999998 9999999999999999988 888888888877643
No 50
>PRK09186 flagellin modification protein A; Provisional
Probab=94.68 E-value=0.045 Score=54.84 Aligned_cols=45 Identities=18% Similarity=0.231 Sum_probs=38.9
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 509 (627)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++..
T Consensus 4 ~k~vlItGas~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~ 50 (256)
T PRK09186 4 GKTILITGAGG--LIGSALVKAILEAGGIVIAADIDKEALNELLESLGK 50 (256)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHh
Confidence 46899999998 9999999999999999998 888888877766543
No 51
>PRK07825 short chain dehydrogenase; Provisional
Probab=94.68 E-value=0.045 Score=55.76 Aligned_cols=43 Identities=19% Similarity=0.228 Sum_probs=37.7
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
+.|+++||+| .||+++|+.|+++|.+|.+ |++++.+++.+++.
T Consensus 6 ~~ilVtGasg--giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 50 (273)
T PRK07825 6 KVVAITGGAR--GIGLATARALAALGARVAIGDLDEALAKETAAELG 50 (273)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc
Confidence 5799999998 9999999999999999988 88888887766544
No 52
>PRK12829 short chain dehydrogenase; Provisional
Probab=94.66 E-value=0.051 Score=54.62 Aligned_cols=45 Identities=20% Similarity=0.420 Sum_probs=38.5
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
..++|+++|++| .||+++|+.|+++|.+|++ |++++.+.++++.+
T Consensus 10 ~~~~vlItGa~g--~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~ 56 (264)
T PRK12829 10 DGLRVLVTGGAS--GIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP 56 (264)
T ss_pred CCCEEEEeCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence 346899999998 9999999999999999888 88887777766654
No 53
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=94.66 E-value=0.061 Score=59.79 Aligned_cols=202 Identities=10% Similarity=0.103 Sum_probs=113.8
Q ss_pred HHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeEecCCCcccceeecCChhHHHHHHhcCCC-----CCcEEEEe
Q 006894 395 INSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPK-----TTAHVLLR 469 (627)
Q Consensus 395 in~~Ie~Ai~~A~~~G~kv~~LG~ln~~e~ln~~g~~~~~r~p~~L~irvv~Gnsltaavv~~~ip~-----~~~~V~l~ 469 (627)
|-.+|-+|...|.+.|.-=--|..+=+ . .+.+.|.-. =+.++-.|..=.+.++++-..+ ..++|+|+
T Consensus 116 IlgQVK~A~~~A~~~g~~g~~L~~lf~-~------A~~~aKrVr-teT~I~~~~vSv~~~Av~la~~~~~~l~~kkvlvi 187 (414)
T PRK13940 116 ILGQVKDSYTLSKKNHAIGKELDRVFQ-K------VFATAKRVR-SETRIGHCPVSVAFSAITLAKRQLDNISSKNVLII 187 (414)
T ss_pred HHHHHHHHHHHHHHcCCchHHHHHHHH-H------HHHHHHHHH-hccCCCCCCcCHHHHHHHHHHHHhcCccCCEEEEE
Confidence 666789999999998864222222111 1 122223311 2245555555444455444422 45789999
Q ss_pred ccCCChhhHHHHHHHHhccCc-eEEe--cchhhhHHHHhhCchh------------hcccce-eccchhhcc--HHHhcC
Q 006894 470 GTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPVE------------AQHNLV-LSTSYAAHK--TEQARA 531 (627)
Q Consensus 470 Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~~------------~~~~lv-~~~~~~~a~--~e~~~a 531 (627)
|+ | ..|+++|.+|+.+|+ ++++ |+.++-++|.++.+.. .+.++| ..|+-..-. .+...
T Consensus 188 Ga-G--~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~~l~~~l~~aDiVI~aT~a~~~vi~~~~~~- 263 (414)
T PRK13940 188 GA-G--QTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSELPQLIKKADIIIAAVNVLEYIVTCKYVG- 263 (414)
T ss_pred cC-c--HHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHHHHHHHhccCCEEEECcCCCCeeECHHHhC-
Confidence 99 5 899999999999885 5666 8888888888775411 122333 222211111 22211
Q ss_pred CCCcEEeeCcCCCCc-C--CC--CCeeEeccCccccCCCccccccccccccchhHHHHHHhHHHh----hhcCCCCC-cc
Q 006894 532 PKGTIFIPYTQIPPR-K--LR--KDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIH----ALEGWDLN-EC 601 (627)
Q Consensus 532 ~~G~~~~~~sq~P~~-~--~R--~dc~~~~~p~~~~P~~~~~~~~~e~~~pr~~~~Ac~a~~~~~----alEg~~~~-e~ 601 (627)
.+...++|.+ +|+. + .. +++.+.+.-- ++. .++-.+..|...+=.|+.||- .++.|... ++
T Consensus 264 ~~~~~~iDLa-vPRdidp~v~~l~~v~l~~iDd------l~~--i~~~n~~~R~~~~~~a~~iI~e~~~~f~~w~~~~~~ 334 (414)
T PRK13940 264 DKPRVFIDIS-IPQALDPKLGELEQNVYYCVDD------INA--VIEDNKDKRKYESSKAQKIIVKSLEEYLEKEKAIIS 334 (414)
T ss_pred CCCeEEEEeC-CCCCCCccccCcCCeEEEeHHH------HHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 2447888999 8855 2 22 3444433222 221 133345566666666777765 67777655 56
Q ss_pred ch-h--h-hhHHHHHHHHHh
Q 006894 602 GQ-T--M-CDIHQVWHASLR 617 (627)
Q Consensus 602 G~-i--v-~~i~~i~~aa~k 617 (627)
.. | + +++++|-+..++
T Consensus 335 ~p~I~~lr~~~~~i~~~el~ 354 (414)
T PRK13940 335 NSAIKELFQKADGLVDLSLE 354 (414)
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 66 5 4 777777555444
No 54
>PRK07890 short chain dehydrogenase; Provisional
Probab=94.63 E-value=0.043 Score=55.03 Aligned_cols=44 Identities=14% Similarity=0.209 Sum_probs=38.5
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++.
T Consensus 5 ~k~vlItGa~~--~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 50 (258)
T PRK07890 5 GKVVVVSGVGP--GLGRTLAVRAARAGADVVLAARTAERLDEVAAEID 50 (258)
T ss_pred CCEEEEECCCC--cHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence 36799999998 9999999999999999998 88888888776654
No 55
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=94.57 E-value=0.044 Score=54.64 Aligned_cols=42 Identities=19% Similarity=0.241 Sum_probs=36.8
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
+.|+++|++| .||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 2 ~~vlItGa~g--~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 45 (255)
T TIGR01963 2 KTALVTGAAS--GIGLAIALALAAAGANVVVNDLGEAGAEAAAKVA 45 (255)
T ss_pred CEEEEcCCcc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 4699999998 9999999999999999888 8888887777654
No 56
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=94.52 E-value=0.16 Score=53.74 Aligned_cols=120 Identities=18% Similarity=0.227 Sum_probs=69.7
Q ss_pred HHHHcCCcEEEecccccccccccCCceeEecCCCcccceeecCChhHHHHHHhcCC--CCCcEEEEeccCCChhhHHHHH
Q 006894 405 EADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVA 482 (627)
Q Consensus 405 ~A~~~G~kv~~LG~ln~~e~ln~~g~~~~~r~p~~L~irvv~Gnsltaavv~~~ip--~~~~~V~l~Gatg~~kig~ava 482 (627)
.|+++|++|+.+-..+. + ...|. +.+ -..+.+.+++..+ -..++|.++|. | .+|+++|
T Consensus 108 ~a~~~gi~v~~~~~~~~---v-------a~~n~----~~~---Ae~ai~~al~~~~~~l~gk~v~IiG~-G--~iG~avA 167 (287)
T TIGR02853 108 LAADAGVKLIELFERDD---V-------AIYNS----IPT---AEGAIMMAIEHTDFTIHGSNVMVLGF-G--RTGMTIA 167 (287)
T ss_pred HHHHCCCeEEEEEeccc---e-------EEEcc----HhH---HHHHHHHHHHhcCCCCCCCEEEEEcC-h--HHHHHHH
Confidence 67788888887665321 1 11110 011 1123334444433 24679999999 5 8999999
Q ss_pred HHHhccCceEEe--cchhhhHHHHhh-Cc--------h-hhcccceecc-chhhc-cHHHhcCCCCcEEeeCcCCC
Q 006894 483 SSLCQMGIKVAT--ICKDDYEKLKLR-IP--------V-EAQHNLVLST-SYAAH-KTEQARAPKGTIFIPYTQIP 544 (627)
Q Consensus 483 ~~L~~~~~~v~l--~~~~~~~~l~~~-~~--------~-~~~~~lv~~~-~~~~a-~~e~~~a~~G~~~~~~sq~P 544 (627)
+.|...|.+|++ |++++.+..++. .. + -.+.++|..+ ...-- ...-+.+++|+.++|.+-.|
T Consensus 168 ~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~~~~~l~~~l~~aDiVint~P~~ii~~~~l~~~k~~aliIDlas~P 243 (287)
T TIGR02853 168 RTFSALGARVFVGARSSADLARITEMGLIPFPLNKLEEKVAEIDIVINTIPALVLTADVLSKLPKHAVIIDLASKP 243 (287)
T ss_pred HHHHHCCCEEEEEeCCHHHHHHHHHCCCeeecHHHHHHHhccCCEEEECCChHHhCHHHHhcCCCCeEEEEeCcCC
Confidence 999999999998 777665554321 10 0 0233444222 21110 12346789999999998434
No 57
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=94.52 E-value=0.051 Score=54.66 Aligned_cols=45 Identities=16% Similarity=0.316 Sum_probs=38.7
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
..+.++++|++| .||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 8 ~~k~~lItGas~--giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~ 54 (254)
T PRK08085 8 AGKNILITGSAQ--GIGFLLATGLAEYGAEIIINDITAERAELAVAKLR 54 (254)
T ss_pred CCCEEEEECCCC--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHH
Confidence 456899999998 9999999999999999999 88888777766654
No 58
>PRK08339 short chain dehydrogenase; Provisional
Probab=94.49 E-value=0.047 Score=55.88 Aligned_cols=45 Identities=16% Similarity=0.193 Sum_probs=39.3
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 509 (627)
.+.++++|++| -||+++|+.|+++|.+|.+ |++++++++++++.+
T Consensus 8 ~k~~lItGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 54 (263)
T PRK08339 8 GKLAFTTASSK--GIGFGVARVLARAGADVILLSRNEENLKKAREKIKS 54 (263)
T ss_pred CCEEEEeCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 46789999997 9999999999999999998 888888888777543
No 59
>PRK07024 short chain dehydrogenase; Provisional
Probab=94.49 E-value=0.059 Score=54.52 Aligned_cols=44 Identities=18% Similarity=0.363 Sum_probs=38.8
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 509 (627)
++|+++|++| -||+++|+.|+++|.+|.+ |+.++.++++++++.
T Consensus 3 ~~vlItGas~--gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~ 48 (257)
T PRK07024 3 LKVFITGASS--GIGQALAREYARQGATLGLVARRTDALQAFAARLPK 48 (257)
T ss_pred CEEEEEcCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccc
Confidence 5799999998 9999999999999999998 888888888777653
No 60
>PRK08267 short chain dehydrogenase; Provisional
Probab=94.47 E-value=0.056 Score=54.61 Aligned_cols=43 Identities=16% Similarity=0.299 Sum_probs=38.2
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++.
T Consensus 2 k~vlItGasg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 46 (260)
T PRK08267 2 KSIFITGAAS--GIGRATALLFAAEGWRVGAYDINEAGLAALAAELG 46 (260)
T ss_pred cEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc
Confidence 5799999998 9999999999999999988 88888888877654
No 61
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=94.46 E-value=0.061 Score=57.29 Aligned_cols=106 Identities=18% Similarity=0.188 Sum_probs=63.7
Q ss_pred hhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeEecCCCcccceeecCChhHHHHHHhcCCC-----CCcE
Q 006894 391 RREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPK-----TTAH 465 (627)
Q Consensus 391 ~~~~in~~Ie~Ai~~A~~~G~kv~~LG~ln~~e~ln~~g~~~~~r~p~~L~irvv~Gnsltaavv~~~ip~-----~~~~ 465 (627)
|.+ |-.++.+|...|++.|.-=--|..|=+ .-+.+.|.-. -+..+-.|..=++..+++...+ ..++
T Consensus 110 E~q-IlgQvk~A~~~a~~~g~~~~~L~~lf~-------~a~~~~k~vr-~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~ 180 (311)
T cd05213 110 ETQ-ILGQVKNAYKLAKEAGTSGKLLNRLFQ-------KAIKVGKRVR-TETGISRGAVSISSAAVELAEKIFGNLKGKK 180 (311)
T ss_pred ChH-HHHHHHHHHHHHHHcCCchHHHHHHHH-------HHHHHHHHHh-hhcCCCCCCcCHHHHHHHHHHHHhCCccCCE
Confidence 444 666799999999998863222221111 0111112211 1234444433333333444432 4678
Q ss_pred EEEeccCCChhhHHHHHHHHhccC-ceEEe--cchhhhHHHHhhCc
Q 006894 466 VLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 466 V~l~Gatg~~kig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~~~ 508 (627)
|+++|+ | .+|+.+++.|+++| .+|++ |+.++.++++++++
T Consensus 181 V~ViGa-G--~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g 223 (311)
T cd05213 181 VLVIGA-G--EMGELAAKHLAAKGVAEITIANRTYERAEELAKELG 223 (311)
T ss_pred EEEECc-H--HHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcC
Confidence 999998 6 99999999999765 56766 88888888877754
No 62
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=94.44 E-value=0.052 Score=54.24 Aligned_cols=43 Identities=16% Similarity=0.241 Sum_probs=37.9
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
+.|+++|++| .||+++|+.|.++|.+|.+ |++++.+++++++.
T Consensus 5 ~~vlItG~sg--~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~ 49 (258)
T PRK12429 5 KVALVTGAAS--GIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQ 49 (258)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHH
Confidence 6899999998 9999999999999999988 88888887776653
No 63
>PF10520 Kua-UEV1_localn: Kua-ubiquitin conjugating enzyme hybrid localisation domain; InterPro: IPR019547 This entry represents part of the transcript of the fusion of two genes, the UEV1. UEV1 is an enzymatically inactive variant of the E2 ubiquitin-conjugating enzymes that regulate non-canonical elongation of ubiquitin chains, and Kua, an otherwise unknown gene. UEV1A is a nuclear protein, whereas both Kua and Kua-UEV localise to cytoplasmic structures, indicating that the addition of a Kua domain to UEV confers new biological properties. UEV1-Kua carries the B domain with its characteristic double histidine motif, and it is probably this domain which determines the cytoplasmic localisation. It is postulated that this hybrid transcript could preferentially direct the variant polyubiquitination of substrates closely associated with the cytoplasmic face of the endoplasmic reticulum, possibly, although not necessarily, in conjunction with membrane-bound ubiquitin-conjugating enzymes [].
Probab=94.38 E-value=0.1 Score=51.68 Aligned_cols=54 Identities=17% Similarity=0.337 Sum_probs=39.3
Q ss_pred HHHHhhcccCceeccccc--ccccCCcccccCChhhhhhhhcC-CCCCcCCCchhhhhhcCC
Q 006894 215 DFMNNMGHCNFEFIPMWL--FTVFPPLKFLMYTPSYHSLHHTQ-FRTNYSLFMPIYDYIYGT 273 (627)
Q Consensus 215 ~~~~~~~Hsg~e~~P~~~--~~~lp~L~~li~tp~~H~lHH~~-~~~NYG~~f~~WDrLFGT 273 (627)
....-+.|.... .|.+. .+..+ ++.+|++|..||.. +++|||...++|+.+...
T Consensus 99 nq~HkWsH~~~~-~P~~V~~LQ~~g----illsr~~H~~HH~aPh~~~YCI~tGw~N~~Ld~ 155 (178)
T PF10520_consen 99 NQFHKWSHTYKS-LPPWVRFLQDAG----ILLSRKHHRIHHVAPHDTNYCITTGWLNPPLDK 155 (178)
T ss_pred HHHHHHHcCCCC-CCHHHHHHHHCC----cccCchhhhccccCcccCCeEeecccchHHHHH
Confidence 344567788666 46541 12223 35689999999999 999999999999988764
No 64
>PRK07478 short chain dehydrogenase; Provisional
Probab=94.38 E-value=0.053 Score=54.58 Aligned_cols=44 Identities=18% Similarity=0.289 Sum_probs=38.6
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
.+.++++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++.
T Consensus 6 ~k~~lItGas~--giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 51 (254)
T PRK07478 6 GKVAIITGASS--GIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIR 51 (254)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 35799999998 9999999999999999998 88888888876654
No 65
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=94.35 E-value=0.053 Score=54.91 Aligned_cols=43 Identities=21% Similarity=0.264 Sum_probs=37.7
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 509 (627)
+|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++.+
T Consensus 2 ~vlItGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~ 46 (259)
T PRK08340 2 NVLVTASSR--GIGFNVARELLKKGARVVISSRNEENLEKALKELKE 46 (259)
T ss_pred eEEEEcCCc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh
Confidence 689999998 9999999999999999998 888888887777643
No 66
>PRK07326 short chain dehydrogenase; Provisional
Probab=94.33 E-value=0.057 Score=53.42 Aligned_cols=45 Identities=22% Similarity=0.240 Sum_probs=38.8
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 509 (627)
.+.|+++|++| .||+++|+.|.++|.+|.+ |++++.+++.+++..
T Consensus 6 ~~~ilItGatg--~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~ 52 (237)
T PRK07326 6 GKVALITGGSK--GIGFAIAEALLAEGYKVAITARDQKELEEAAAELNN 52 (237)
T ss_pred CCEEEEECCCC--cHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhc
Confidence 36799999998 9999999999999999988 888888877776643
No 67
>PRK05993 short chain dehydrogenase; Provisional
Probab=94.32 E-value=0.061 Score=55.31 Aligned_cols=40 Identities=20% Similarity=0.274 Sum_probs=36.0
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHh
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 505 (627)
+.|+++|++| -||+++|+.|+++|.+|.+ |+.++++.+++
T Consensus 5 k~vlItGasg--giG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~ 46 (277)
T PRK05993 5 RSILITGCSS--GIGAYCARALQSDGWRVFATCRKEEDVAALEA 46 (277)
T ss_pred CEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 5799999998 9999999999999999998 88888887765
No 68
>PRK07062 short chain dehydrogenase; Provisional
Probab=94.31 E-value=0.059 Score=54.57 Aligned_cols=46 Identities=15% Similarity=0.161 Sum_probs=39.6
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 509 (627)
..+.++++|++| .||+++|+.|+++|.+|.+ |+.++++++.+++.+
T Consensus 7 ~~k~~lItGas~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 54 (265)
T PRK07062 7 EGRVAVVTGGSS--GIGLATVELLLEAGASVAICGRDEERLASAEARLRE 54 (265)
T ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh
Confidence 346899999998 9999999999999999988 888888887766544
No 69
>PRK06139 short chain dehydrogenase; Provisional
Probab=94.30 E-value=0.053 Score=58.03 Aligned_cols=44 Identities=14% Similarity=0.243 Sum_probs=39.0
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
.+.|+++||+| -||+++|+.|+++|.+|.+ |++++++++.+++.
T Consensus 7 ~k~vlITGAs~--GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~ 52 (330)
T PRK06139 7 GAVVVITGASS--GIGQATAEAFARRGARLVLAARDEEALQAVAEECR 52 (330)
T ss_pred CCEEEEcCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence 46899999997 9999999999999999999 99999888876643
No 70
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=94.30 E-value=0.063 Score=54.01 Aligned_cols=46 Identities=15% Similarity=0.149 Sum_probs=39.2
Q ss_pred CCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 461 ~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
...+.|+++|++| -||+++|+.|+++|.+|.+ |++++++++.+++.
T Consensus 9 ~~~k~ilItGas~--~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 56 (256)
T PRK06124 9 LAGQVALVTGSAR--GLGFEIARALAGAGAHVLVNGRNAATLEAAVAALR 56 (256)
T ss_pred CCCCEEEEECCCc--hHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHH
Confidence 3467899999998 9999999999999999999 88887777766653
No 71
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=94.27 E-value=0.065 Score=54.03 Aligned_cols=44 Identities=25% Similarity=0.258 Sum_probs=38.5
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 6 ~~~vlItGas~--~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 51 (257)
T PRK07067 6 GKVALLTGAAS--GIGEAVAERYLAEGARVVIADIKPARARLAALEIG 51 (257)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC
Confidence 45799999998 9999999999999999988 88888888776653
No 72
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.26 E-value=0.066 Score=53.26 Aligned_cols=44 Identities=14% Similarity=0.273 Sum_probs=38.1
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
.+.|+++|++| -||+++|+.|+++|.+|++ |+.++.+.+.+++.
T Consensus 5 ~~~vlItGasg--~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 50 (251)
T PRK07231 5 GKVAIVTGASS--GIGEGIARRFAAEGARVVVTDRNEEAAERVAAEIL 50 (251)
T ss_pred CcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence 35899999998 9999999999999999988 88888877766654
No 73
>PRK08017 oxidoreductase; Provisional
Probab=94.25 E-value=0.065 Score=53.68 Aligned_cols=40 Identities=23% Similarity=0.295 Sum_probs=34.8
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHh
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 505 (627)
++|+|+|++| -||+++|+.|+++|.+|.+ |+.++.+.+++
T Consensus 3 k~vlVtGasg--~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~ 44 (256)
T PRK08017 3 KSVLITGCSS--GIGLEAALELKRRGYRVLAACRKPDDVARMNS 44 (256)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh
Confidence 5799999998 9999999999999999988 88887776643
No 74
>PRK05884 short chain dehydrogenase; Provisional
Probab=94.23 E-value=0.064 Score=53.58 Aligned_cols=41 Identities=27% Similarity=0.348 Sum_probs=36.7
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
+|+++|++| -||+++|+.|+++|.+|.+ |++++++++.+++
T Consensus 2 ~vlItGas~--giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~ 44 (223)
T PRK05884 2 EVLVTGGDT--DLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL 44 (223)
T ss_pred eEEEEeCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc
Confidence 589999998 9999999999999999988 8888888877665
No 75
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=94.21 E-value=0.072 Score=54.03 Aligned_cols=43 Identities=19% Similarity=0.281 Sum_probs=37.7
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.++++++.
T Consensus 5 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~ 49 (262)
T TIGR03325 5 GEVVLVTGGAS--GLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAH 49 (262)
T ss_pred CcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc
Confidence 46899999998 9999999999999999998 8888888876543
No 76
>PRK05872 short chain dehydrogenase; Provisional
Probab=94.20 E-value=0.071 Score=55.57 Aligned_cols=46 Identities=17% Similarity=0.244 Sum_probs=40.5
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 509 (627)
..+.|+++|++| -||+++|+.|+++|.+|.+ |++++++++.+++..
T Consensus 8 ~gk~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~ 55 (296)
T PRK05872 8 AGKVVVVTGAAR--GIGAELARRLHARGAKLALVDLEEAELAALAAELGG 55 (296)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC
Confidence 346899999998 9999999999999999988 889999988877653
No 77
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=94.16 E-value=0.072 Score=54.00 Aligned_cols=44 Identities=18% Similarity=0.279 Sum_probs=38.9
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.++++
T Consensus 6 ~k~vlVtGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 51 (263)
T PRK06200 6 GQVALITGGGS--GIGRALVERFLAEGARVAVLERSAEKLASLRQRFG 51 (263)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence 35799999997 9999999999999999988 88888888877664
No 78
>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]
Probab=94.15 E-value=0.22 Score=53.85 Aligned_cols=131 Identities=15% Similarity=0.100 Sum_probs=85.3
Q ss_pred HcCCcEEEecccccc-cccccCCceeEecCCC-cccceeecCChhHH-------HHHHhcC-CCCCcEEEEeccCCChhh
Q 006894 408 AKGVKVISLGLLNQG-EELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKV 477 (627)
Q Consensus 408 ~~G~kv~~LG~ln~~-e~ln~~g~~~~~r~p~-~L~irvv~Gnslta-------avv~~~i-p~~~~~V~l~Gatg~~ki 477 (627)
-.|+|+++ |-.... ..|..--++.+--.|+ +..+-+.||+.+|+ |++.+-+ |++.+.+.++|+- ..
T Consensus 66 ~~gvK~v~-~~p~N~~~glp~v~g~~~L~d~~TG~plal~d~~~lTa~RTaAasavAa~~LA~~da~~laiIGaG---~q 141 (330)
T COG2423 66 VAGVKIVG-VHPDNPARGLPTVSGVIVLFDAETGEPLALLDATRLTALRTAAASAVAAKYLARKDASTLAIIGAG---AQ 141 (330)
T ss_pred eEEEEEec-CcCCccccCCCcceEEEEEEecCCCCEEEEecCccHHHHHHHHHHHHHHHHhccCCCcEEEEECCc---HH
Confidence 45667766 222222 2333333444444444 35589999999985 3445554 6789999999998 89
Q ss_pred HHHHHHHHhc--cCceEEe--cchhhhHHHHhhCchhhcccceeccchhhc----------------cHHHhcCCCCcEE
Q 006894 478 ANAVASSLCQ--MGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAH----------------KTEQARAPKGTIF 537 (627)
Q Consensus 478 g~ava~~L~~--~~~~v~l--~~~~~~~~l~~~~~~~~~~~lv~~~~~~~a----------------~~e~~~a~~G~~~ 537 (627)
|+.-++++++ ...++.+ |+++.-+++.+++.+.....+.-..|.++| ..+.++++||+++
T Consensus 142 A~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aDiIvt~T~s~~Pil~~~~l~~G~hI 221 (330)
T COG2423 142 ARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEEAVEGADIVVTATPSTEPVLKAEWLKPGTHI 221 (330)
T ss_pred HHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHHHhhcCCEEEEecCCCCCeecHhhcCCCcEE
Confidence 9999999994 4444555 888888888766555443332233343333 2567999999999
Q ss_pred eeCcC
Q 006894 538 IPYTQ 542 (627)
Q Consensus 538 ~~~sq 542 (627)
.-+..
T Consensus 222 ~aiGa 226 (330)
T COG2423 222 NAIGA 226 (330)
T ss_pred EecCC
Confidence 97776
No 79
>PRK05866 short chain dehydrogenase; Provisional
Probab=94.15 E-value=0.062 Score=56.14 Aligned_cols=44 Identities=23% Similarity=0.339 Sum_probs=38.6
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 40 ~k~vlItGasg--gIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~ 85 (293)
T PRK05866 40 GKRILLTGASS--GIGEAAAEQFARRGATVVAVARREDLLDAVADRIT 85 (293)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence 36899999998 9999999999999999998 88888888876653
No 80
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.14 E-value=0.066 Score=53.42 Aligned_cols=42 Identities=21% Similarity=0.306 Sum_probs=35.5
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe---cchhhhHHHHhhC
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~ 507 (627)
+.|+++|++| .||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 5 ~~vlItGa~g--~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~ 49 (250)
T PRK08063 5 KVALVTGSSR--GIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEI 49 (250)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 5899999998 9999999999999999765 7777777666554
No 81
>PRK06500 short chain dehydrogenase; Provisional
Probab=94.14 E-value=0.074 Score=52.97 Aligned_cols=43 Identities=16% Similarity=0.203 Sum_probs=37.6
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++++++.
T Consensus 7 k~vlItGasg--~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~ 51 (249)
T PRK06500 7 KTALITGGTS--GIGLETARQFLAEGARVAITGRDPASLEAARAELG 51 (249)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhC
Confidence 5799999998 9999999999999999988 77777877776654
No 82
>PRK08643 acetoin reductase; Validated
Probab=94.13 E-value=0.064 Score=53.93 Aligned_cols=43 Identities=21% Similarity=0.264 Sum_probs=37.5
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+++++++.
T Consensus 3 k~~lItGas~--giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 47 (256)
T PRK08643 3 KVALVTGAGQ--GIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLS 47 (256)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 5789999998 9999999999999999988 88888888777654
No 83
>PRK07589 ornithine cyclodeaminase; Validated
Probab=94.07 E-value=0.29 Score=53.32 Aligned_cols=130 Identities=13% Similarity=0.001 Sum_probs=81.6
Q ss_pred HcCCcEEEecccccccccccCCceeEecCCC-cccceeecCChhHH-------HHHHhcC-CCCCcEEEEeccCCChhhH
Q 006894 408 AKGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVA 478 (627)
Q Consensus 408 ~~G~kv~~LG~ln~~e~ln~~g~~~~~r~p~-~L~irvv~Gnslta-------avv~~~i-p~~~~~V~l~Gatg~~kig 478 (627)
-.|+|+++.=-=|....+-.--++++--++. +.-+-+.||+.+|+ |+..+-+ +++.+++.++|+- ..|
T Consensus 65 ~~gvK~v~~~p~N~~~glP~i~g~v~L~D~~TG~p~Alldg~~lT~~RTaA~sala~~~Lar~da~~l~iiGaG---~QA 141 (346)
T PRK07589 65 LYSFKYVNGHPKNTRRGLQTVMAFGVLADVDTGYPLLLSEMTLLTALRTAATSALAAKYLARPDSRTMALIGNG---AQS 141 (346)
T ss_pred ceEEEEEeeCCCccccCCCceeEEEEEEECCCCCEEEEEcCccHHHHHHHHHHHHHHHHhccCCCcEEEEECCc---HHH
Confidence 3678877643324333333333334444443 34589999999984 3344555 6788899999987 899
Q ss_pred HHHHHHHh--ccCceEEe--cchhhhHHHHhhCchhhcccceeccchhhc----c--------------HHHhcCCCCcE
Q 006894 479 NAVASSLC--QMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAH----K--------------TEQARAPKGTI 536 (627)
Q Consensus 479 ~ava~~L~--~~~~~v~l--~~~~~~~~l~~~~~~~~~~~lv~~~~~~~a----~--------------~e~~~a~~G~~ 536 (627)
+.-++++| +.-.+|.+ |++++-+++.+++.+. +.++..+.+.++| + .+.++++||++
T Consensus 142 ~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~-~~~v~~~~~~~~av~~ADIIvtaT~S~~~~Pvl~~~~lkpG~h 220 (346)
T PRK07589 142 EFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGP-GLRIVACRSVAEAVEGADIITTVTADKTNATILTDDMVEPGMH 220 (346)
T ss_pred HHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhc-CCcEEEeCCHHHHHhcCCEEEEecCCCCCCceecHHHcCCCcE
Confidence 99999998 45556666 9999988888776542 2221112232222 2 23579999999
Q ss_pred EeeCc
Q 006894 537 FIPYT 541 (627)
Q Consensus 537 ~~~~s 541 (627)
+.-+-
T Consensus 221 V~aIG 225 (346)
T PRK07589 221 INAVG 225 (346)
T ss_pred EEecC
Confidence 98654
No 84
>PRK08251 short chain dehydrogenase; Provisional
Probab=94.06 E-value=0.075 Score=53.08 Aligned_cols=44 Identities=20% Similarity=0.330 Sum_probs=38.4
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 509 (627)
+.|+++|++| -||+++|+.|+++|.+|++ |+.++.+++.+++..
T Consensus 3 k~vlItGas~--giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~ 48 (248)
T PRK08251 3 QKILITGASS--GLGAGMAREFAAKGRDLALCARRTDRLEELKAELLA 48 (248)
T ss_pred CEEEEECCCC--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh
Confidence 5799999998 9999999999999999988 888888888766543
No 85
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=94.01 E-value=0.14 Score=46.76 Aligned_cols=86 Identities=14% Similarity=0.138 Sum_probs=53.2
Q ss_pred EEEEeccCCChhhHHHHHHHHhc-cCceEEe---cch---hhhHHHHhhCchh-------------hcccce-eccc-hh
Q 006894 465 HVLLRGTVTANKVANAVASSLCQ-MGIKVAT---ICK---DDYEKLKLRIPVE-------------AQHNLV-LSTS-YA 522 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~-~~~~v~l---~~~---~~~~~l~~~~~~~-------------~~~~lv-~~~~-~~ 522 (627)
+|+++|||| -+|+.+++.|.+ ....++. +++ .++.......... .+.++| ..++ -.
T Consensus 1 rV~IvGAtG--~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~ 78 (121)
T PF01118_consen 1 RVAIVGATG--YVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVFLALPHGA 78 (121)
T ss_dssp EEEEESTTS--HHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEEE-SCHHH
T ss_pred CEEEECCCC--HHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHhhcCCEEEecCchhH
Confidence 589999999 999999999996 4666555 333 2344443311110 223333 1221 11
Q ss_pred hccHHHhcCCCCcEEeeCcCCCCc-CCCCCeeEe
Q 006894 523 AHKTEQARAPKGTIFIPYTQIPPR-KLRKDCFYH 555 (627)
Q Consensus 523 ~a~~e~~~a~~G~~~~~~sq~P~~-~~R~dc~~~ 555 (627)
.+...++-+++|+.++|.| .. .+.+|+.|+
T Consensus 79 ~~~~~~~~~~~g~~ViD~s---~~~R~~~~~~~~ 109 (121)
T PF01118_consen 79 SKELAPKLLKAGIKVIDLS---GDFRLDDDVPYG 109 (121)
T ss_dssp HHHHHHHHHHTTSEEEESS---STTTTSTTSEEE
T ss_pred HHHHHHHHhhCCcEEEeCC---HHHhCCCCCCEE
Confidence 2224456689999999998 66 666888886
No 86
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.00 E-value=0.069 Score=57.31 Aligned_cols=53 Identities=19% Similarity=0.203 Sum_probs=43.7
Q ss_pred HHhcCCCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch
Q 006894 455 VVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 455 v~~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 509 (627)
+.+.++-..+.++++|+|+ -||+++|+.||++|.+|.| ||.++-++.++++..
T Consensus 27 ~~~~~~~~~~~~vVTGans--GIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~ 81 (314)
T KOG1208|consen 27 VTHGIDLSGKVALVTGATS--GIGFETARELALRGAHVVLACRNEERGEEAKEQIQK 81 (314)
T ss_pred eeccccCCCcEEEEECCCC--chHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 3344444557899999996 9999999999999999999 999888887777655
No 87
>PRK06180 short chain dehydrogenase; Provisional
Probab=93.98 E-value=0.084 Score=54.19 Aligned_cols=42 Identities=14% Similarity=0.162 Sum_probs=36.9
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 506 (627)
.+.|+|+|++| -||+++|+.|.++|.+|.+ |+.++.+.+++.
T Consensus 4 ~~~vlVtGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~ 47 (277)
T PRK06180 4 MKTWLITGVSS--GFGRALAQAALAAGHRVVGTVRSEAARADFEAL 47 (277)
T ss_pred CCEEEEecCCC--hHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh
Confidence 35799999998 9999999999999999998 888888777654
No 88
>PRK08703 short chain dehydrogenase; Provisional
Probab=93.98 E-value=0.071 Score=53.14 Aligned_cols=44 Identities=20% Similarity=0.250 Sum_probs=38.8
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++.
T Consensus 6 ~k~vlItG~sg--giG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~ 51 (239)
T PRK08703 6 DKTILVTGASQ--GLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIV 51 (239)
T ss_pred CCEEEEECCCC--cHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHH
Confidence 36899999998 9999999999999999988 88888888877654
No 89
>PLN02253 xanthoxin dehydrogenase
Probab=93.93 E-value=0.11 Score=53.26 Aligned_cols=45 Identities=16% Similarity=0.163 Sum_probs=38.1
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 509 (627)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.+..+++.+++..
T Consensus 18 ~k~~lItGas~--gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~ 64 (280)
T PLN02253 18 GKVALVTGGAT--GIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG 64 (280)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC
Confidence 46899999998 9999999999999999988 667777777766643
No 90
>PRK08862 short chain dehydrogenase; Provisional
Probab=93.90 E-value=0.074 Score=53.58 Aligned_cols=44 Identities=5% Similarity=0.155 Sum_probs=38.6
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
.+.++++|+++ -||+++|+.|+++|.+|.+ |++++++++.+++.
T Consensus 5 ~k~~lVtGas~--GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~ 50 (227)
T PRK08862 5 SSIILITSAGS--VLGRTISCHFARLGATLILCDQDQSALKDTYEQCS 50 (227)
T ss_pred CeEEEEECCcc--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH
Confidence 36899999997 9999999999999999999 88888888876653
No 91
>PRK06057 short chain dehydrogenase; Provisional
Probab=93.88 E-value=0.088 Score=53.09 Aligned_cols=44 Identities=16% Similarity=0.122 Sum_probs=38.1
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++++++.
T Consensus 7 ~~~vlItGasg--gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 52 (255)
T PRK06057 7 GRVAVITGGGS--GIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG 52 (255)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC
Confidence 36899999998 9999999999999999988 88888877776653
No 92
>PRK05876 short chain dehydrogenase; Provisional
Probab=93.87 E-value=0.074 Score=54.94 Aligned_cols=44 Identities=11% Similarity=0.203 Sum_probs=37.6
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++++++.+++.
T Consensus 6 ~k~vlVTGas~--gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~ 51 (275)
T PRK05876 6 GRGAVITGGAS--GIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLR 51 (275)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 35799999998 9999999999999999988 88888877766553
No 93
>PRK12828 short chain dehydrogenase; Provisional
Probab=93.87 E-value=0.089 Score=51.73 Aligned_cols=42 Identities=19% Similarity=0.119 Sum_probs=34.3
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 506 (627)
.+.|+++|++| .||+++|+.|+++|.+|.+ |+.++.++..++
T Consensus 7 ~k~vlItGatg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~ 50 (239)
T PRK12828 7 GKVVAITGGFG--GLGRATAAWLAARGARVALIGRGAAPLSQTLPG 50 (239)
T ss_pred CCEEEEECCCC--cHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHH
Confidence 46799999998 9999999999999999888 776665544333
No 94
>PRK06924 short chain dehydrogenase; Provisional
Probab=93.83 E-value=0.085 Score=52.79 Aligned_cols=41 Identities=24% Similarity=0.372 Sum_probs=34.2
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cch-hhhHHHHhh
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLR 506 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~-~~~~~l~~~ 506 (627)
+.|+++|++| -||+++|+.|+++|.+|++ |++ ++++++.++
T Consensus 2 k~vlItGasg--giG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~ 45 (251)
T PRK06924 2 RYVIITGTSQ--GLGEAIANQLLEKGTHVISISRTENKELTKLAEQ 45 (251)
T ss_pred cEEEEecCCc--hHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhc
Confidence 4799999998 9999999999999999988 665 556666544
No 95
>PRK06182 short chain dehydrogenase; Validated
Probab=93.82 E-value=0.095 Score=53.51 Aligned_cols=41 Identities=24% Similarity=0.266 Sum_probs=35.5
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHh
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 505 (627)
.+.|+++|++| .||+++|+.|+++|.+|.+ |+.++++++.+
T Consensus 3 ~k~vlItGasg--giG~~la~~l~~~G~~V~~~~r~~~~l~~~~~ 45 (273)
T PRK06182 3 KKVALVTGASS--GIGKATARRLAAQGYTVYGAARRVDKMEDLAS 45 (273)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 36799999998 9999999999999999998 88887776643
No 96
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.82 E-value=0.11 Score=55.49 Aligned_cols=141 Identities=23% Similarity=0.272 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeEec-CCCcccc----------eeecCCh
Q 006894 393 EAINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLER-QPNKLKI----------KVVDGSS 449 (627)
Q Consensus 393 ~~in~~Ie~Ai~~A~~~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~r-~p~~L~i----------rvv~Gns 449 (627)
++-+.-++.-++.|++.|++.. -|. .++..+++|.|- ++.+.. -|++++. +=|||=+
T Consensus 45 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~ 124 (301)
T PRK14194 45 PASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLLALIAELNADPSVNGILLQLPLPAHIDEARVLQAINPLKDVDGFH 124 (301)
T ss_pred hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhccCchhccCccC
Confidence 3445556666778888888764 343 233335577664 333331 1222331 1234432
Q ss_pred ----------------hHHHHHHhcC-----CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh
Q 006894 450 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (627)
Q Consensus 450 ----------------ltaavv~~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 506 (627)
-|++.|++=+ +-.-++|.++|..| -+|+.+|..|.++|..|++ +..+..+++
T Consensus 125 ~~N~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~--ivG~PmA~~L~~~gatVtv~~~~t~~l~e~--- 199 (301)
T PRK14194 125 SENVGGLSQGRDVLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSN--IVGKPMAALLLQAHCSVTVVHSRSTDAKAL--- 199 (301)
T ss_pred hhhhhHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEECCCCCCHHHH---
Confidence 3566665544 44688999999998 9999999999999999999 333222211
Q ss_pred CchhhcccceeccchhhccHHHhcCCCCcEEeeCc
Q 006894 507 IPVEAQHNLVLSTSYAAHKTEQARAPKGTIFIPYT 541 (627)
Q Consensus 507 ~~~~~~~~lv~~~~~~~a~~e~~~a~~G~~~~~~s 541 (627)
+ ++.++|.+.--.....+..++++|++++|++
T Consensus 200 ~---~~ADIVIsavg~~~~v~~~~ik~GaiVIDvg 231 (301)
T PRK14194 200 C---RQADIVVAAVGRPRLIDADWLKPGAVVIDVG 231 (301)
T ss_pred H---hcCCEEEEecCChhcccHhhccCCcEEEEec
Confidence 1 2344443332222345667799999999999
No 97
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=93.82 E-value=0.083 Score=53.32 Aligned_cols=44 Identities=16% Similarity=0.240 Sum_probs=38.0
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+.+.+++.
T Consensus 12 ~k~ilItGa~g--~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~ 57 (259)
T PRK08213 12 GKTALVTGGSR--GLGLQIAEALGEAGARVVLSARKAEELEEAAAHLE 57 (259)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence 46899999998 9999999999999999988 88888777766543
No 98
>PRK07109 short chain dehydrogenase; Provisional
Probab=93.81 E-value=0.08 Score=56.57 Aligned_cols=45 Identities=24% Similarity=0.313 Sum_probs=39.1
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
..+.|+++|++| -||+++|+.|+++|.+|.+ |++++++++.+++.
T Consensus 7 ~~k~vlITGas~--gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~ 53 (334)
T PRK07109 7 GRQVVVITGASA--GVGRATARAFARRGAKVVLLARGEEGLEALAAEIR 53 (334)
T ss_pred CCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence 346899999998 9999999999999999988 88888888776653
No 99
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=93.81 E-value=0.08 Score=49.44 Aligned_cols=43 Identities=19% Similarity=0.261 Sum_probs=35.5
Q ss_pred cEEEEeccCCChhhHHHHHHHHhcc-CceEEe--cc--hhhhHHHHhhCc
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQM-GIKVAT--IC--KDDYEKLKLRIP 508 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~-~~~v~l--~~--~~~~~~l~~~~~ 508 (627)
+.|+++|+++ -||+++|+.|+++ +.+|.+ |+ .++.+++.+++.
T Consensus 1 k~~lItGa~~--giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~ 48 (167)
T PF00106_consen 1 KTVLITGASS--GIGRALARALARRGARVVILTSRSEDSEGAQELIQELK 48 (167)
T ss_dssp EEEEEETTTS--HHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHH
T ss_pred CEEEEECCCC--HHHHHHHHHHHhcCceEEEEeeeccccccccccccccc
Confidence 5789999997 9999999999998 556666 77 677888877766
No 100
>PRK06197 short chain dehydrogenase; Provisional
Probab=93.75 E-value=0.088 Score=54.92 Aligned_cols=44 Identities=20% Similarity=0.201 Sum_probs=36.1
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.++..+++
T Consensus 15 ~~k~vlItGas~--gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l 60 (306)
T PRK06197 15 SGRVAVVTGANT--GLGYETAAALAAKGAHVVLAVRNLDKGKAAAARI 60 (306)
T ss_pred CCCEEEEcCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 357899999998 9999999999999999877 8877766544443
No 101
>PRK05717 oxidoreductase; Validated
Probab=93.74 E-value=0.11 Score=52.33 Aligned_cols=44 Identities=16% Similarity=0.212 Sum_probs=36.9
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
..+.|+++|++| .||+++|+.|+++|.+|.+ |++++.+++.+++
T Consensus 9 ~~k~vlItG~sg--~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~ 54 (255)
T PRK05717 9 NGRVALVTGAAR--GIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL 54 (255)
T ss_pred CCCEEEEeCCcc--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc
Confidence 456899999998 9999999999999999988 6777766665554
No 102
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=93.74 E-value=0.096 Score=52.67 Aligned_cols=42 Identities=21% Similarity=0.313 Sum_probs=36.9
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.++++
T Consensus 2 ~vlItGasg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 45 (248)
T PRK10538 2 IVLVTGATA--GFGECITRRFIQQGHKVIATGRRQERLQELKDELG 45 (248)
T ss_pred EEEEECCCc--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc
Confidence 589999998 9999999999999999998 88888888776553
No 103
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=93.73 E-value=0.081 Score=52.52 Aligned_cols=43 Identities=26% Similarity=0.371 Sum_probs=36.4
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 7 ~~ilItGasg--~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~ 51 (251)
T PRK12826 7 RVALVTGAAR--GIGRAIAVRLAADGAEVIVVDICGDDAAATAELVE 51 (251)
T ss_pred CEEEEcCCCC--cHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 5799999998 9999999999999999988 88777766665543
No 104
>PRK06172 short chain dehydrogenase; Provisional
Probab=93.72 E-value=0.09 Score=52.77 Aligned_cols=44 Identities=20% Similarity=0.160 Sum_probs=37.8
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++.
T Consensus 7 ~k~ilItGas~--~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 52 (253)
T PRK06172 7 GKVALVTGGAA--GIGRATALAFAREGAKVVVADRDAAGGEETVALIR 52 (253)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence 46899999998 9999999999999999988 88888777766553
No 105
>PRK09291 short chain dehydrogenase; Provisional
Probab=93.68 E-value=0.092 Score=52.63 Aligned_cols=41 Identities=20% Similarity=0.260 Sum_probs=34.7
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 506 (627)
+.|+|+|++| -||+++++.|+++|.+|.. |+.++.+++++.
T Consensus 3 ~~vlVtGasg--~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~ 45 (257)
T PRK09291 3 KTILITGAGS--GFGREVALRLARKGHNVIAGVQIAPQVTALRAE 45 (257)
T ss_pred CEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 4799999999 9999999999999999987 777666666543
No 106
>PRK05875 short chain dehydrogenase; Provisional
Probab=93.65 E-value=0.1 Score=53.11 Aligned_cols=44 Identities=20% Similarity=0.222 Sum_probs=36.9
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
..+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+.+.+++
T Consensus 6 ~~k~vlItGasg--~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l 51 (276)
T PRK05875 6 QDRTYLVTGGGS--GIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEI 51 (276)
T ss_pred CCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence 347899999998 9999999999999999998 7777776665553
No 107
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=93.64 E-value=0.14 Score=53.84 Aligned_cols=97 Identities=19% Similarity=0.191 Sum_probs=61.0
Q ss_pred eecCChhHHHHHHhcCCCCCcEEEEeccCCChhhHHHHHHHHhccCce-EEe--cchhhhHHHHhhCchh-------hcc
Q 006894 444 VVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRIPVE-------AQH 513 (627)
Q Consensus 444 vv~Gnsltaavv~~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~~~-v~l--~~~~~~~~l~~~~~~~-------~~~ 513 (627)
=|||-.+..+.--..++. .++|++.||-| .|+|++.+|.+.|++ +.+ |+.++-++|.+++... ...
T Consensus 104 NTD~~Gf~~~L~~~~~~~-~~~vlilGaGG---aarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~~~~~~~~~~ 179 (272)
T PRK12550 104 NTDYIAIAKLLASYQVPP-DLVVALRGSGG---MAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEWRPDLGGIEA 179 (272)
T ss_pred ecCHHHHHHHHHhcCCCC-CCeEEEECCcH---HHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcchhhcccccC
Confidence 367777766554334443 35899999986 589999999988875 777 9999999887654321 112
Q ss_pred cce-eccchh-----hc---cHHHhcCCCCcEEeeCcCCC
Q 006894 514 NLV-LSTSYA-----AH---KTEQARAPKGTIFIPYTQIP 544 (627)
Q Consensus 514 ~lv-~~~~~~-----~a---~~e~~~a~~G~~~~~~sq~P 544 (627)
++| +.|+.- +. ..+...++++..+.|..--|
T Consensus 180 dlvINaTp~Gm~~~~~~~~~pi~~~~l~~~~~v~D~vY~P 219 (272)
T PRK12550 180 DILVNVTPIGMAGGPEADKLAFPEAEIDAASVVFDVVALP 219 (272)
T ss_pred CEEEECCccccCCCCccccCCCCHHHcCCCCEEEEeecCC
Confidence 333 444311 10 12345566777777776545
No 108
>PRK06194 hypothetical protein; Provisional
Probab=93.64 E-value=0.086 Score=54.02 Aligned_cols=43 Identities=14% Similarity=0.251 Sum_probs=36.8
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
+.|+++|++| -||+++|+.|+++|.+|++ |+.++++++.+++.
T Consensus 7 k~vlVtGasg--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 51 (287)
T PRK06194 7 KVAVITGAAS--GFGLAFARIGAALGMKLVLADVQQDALDRAVAELR 51 (287)
T ss_pred CEEEEeCCcc--HHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH
Confidence 5799999998 9999999999999999988 77777777666543
No 109
>PRK07454 short chain dehydrogenase; Provisional
Probab=93.63 E-value=0.091 Score=52.34 Aligned_cols=44 Identities=20% Similarity=0.341 Sum_probs=37.9
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
.+.++++|++| .||+++|+.|+++|.+|.+ |++++.+.+.+++.
T Consensus 6 ~k~vlItG~sg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 51 (241)
T PRK07454 6 MPRALITGASS--GIGKATALAFAKAGWDLALVARSQDALEALAAELR 51 (241)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 46899999998 9999999999999999998 88888777766553
No 110
>PRK09072 short chain dehydrogenase; Provisional
Probab=93.62 E-value=0.1 Score=52.79 Aligned_cols=43 Identities=26% Similarity=0.394 Sum_probs=38.2
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
.+.|+++|++| -||+++|+.|+++|.+|++ |++++.+++++++
T Consensus 5 ~~~vlItG~s~--~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 49 (263)
T PRK09072 5 DKRVLLTGASG--GIGQALAEALAAAGARLLLVGRNAEKLEALAARL 49 (263)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 35799999998 9999999999999999998 8888888887765
No 111
>PRK07035 short chain dehydrogenase; Provisional
Probab=93.62 E-value=0.091 Score=52.69 Aligned_cols=45 Identities=22% Similarity=0.223 Sum_probs=38.8
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 509 (627)
.+.|+++|++| -||+++|+.|.++|.+|.+ |+.++.+++.+++.+
T Consensus 8 ~k~vlItGas~--gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~ 54 (252)
T PRK07035 8 GKIALVTGASR--GIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVA 54 (252)
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 46799999998 9999999999999999998 888888877776543
No 112
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.62 E-value=0.094 Score=51.95 Aligned_cols=43 Identities=19% Similarity=0.230 Sum_probs=37.2
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
+.|+++|++| .||+++|+.|+++|.+|.+ |++++.+.+.+++.
T Consensus 6 ~~vlItGa~g--~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 50 (238)
T PRK05786 6 KKVAIIGVSE--GLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLS 50 (238)
T ss_pred cEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 5899999998 9999999999999999998 88888877755543
No 113
>PRK12742 oxidoreductase; Provisional
Probab=93.60 E-value=0.11 Score=51.45 Aligned_cols=43 Identities=23% Similarity=0.258 Sum_probs=35.4
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe---cchhhhHHHHhhC
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~ 507 (627)
.+.|+++|++| -||+++|+.|.++|.+|.+ +++++.+++.++.
T Consensus 6 ~k~vlItGasg--gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~ 51 (237)
T PRK12742 6 GKKVLVLGGSR--GIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET 51 (237)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh
Confidence 46899999998 9999999999999999876 4566777765554
No 114
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=93.54 E-value=0.11 Score=52.84 Aligned_cols=49 Identities=14% Similarity=0.135 Sum_probs=40.7
Q ss_pred cCCCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 458 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 458 ~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
..+...+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 5 ~~~~~~k~~lItGa~~--~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~ 55 (265)
T PRK07097 5 LFSLKGKIALITGASY--GIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYR 55 (265)
T ss_pred ccCCCCCEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHH
Confidence 3444567899999998 9999999999999999988 77788877766654
No 115
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=93.54 E-value=0.1 Score=55.01 Aligned_cols=43 Identities=19% Similarity=0.200 Sum_probs=37.8
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 6 ~k~vlVTGas~--gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l 50 (322)
T PRK07453 6 KGTVIITGASS--GVGLYAAKALAKRGWHVIMACRNLKKAEAAAQEL 50 (322)
T ss_pred CCEEEEEcCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence 46799999998 9999999999999999988 8888887776665
No 116
>PRK07102 short chain dehydrogenase; Provisional
Probab=93.53 E-value=0.098 Score=52.28 Aligned_cols=42 Identities=19% Similarity=0.295 Sum_probs=36.2
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
++|+++|++| -||+++|+.|+++|.+|++ |++++.+.+.+++
T Consensus 2 ~~vlItGas~--giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~ 45 (243)
T PRK07102 2 KKILIIGATS--DIARACARRYAAAGARLYLAARDVERLERLADDL 45 (243)
T ss_pred cEEEEEcCCc--HHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHH
Confidence 4799999998 9999999999999999988 8887777665554
No 117
>PRK06125 short chain dehydrogenase; Provisional
Probab=93.52 E-value=0.099 Score=52.84 Aligned_cols=45 Identities=20% Similarity=0.265 Sum_probs=39.2
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 509 (627)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++++++..
T Consensus 7 ~k~vlItG~~~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~ 53 (259)
T PRK06125 7 GKRVLITGASK--GIGAAAAEAFAAEGCHLHLVARDADALEALAADLRA 53 (259)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh
Confidence 47899999998 9999999999999999988 888888887776654
No 118
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=93.51 E-value=0.12 Score=56.75 Aligned_cols=125 Identities=14% Similarity=0.138 Sum_probs=70.2
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhcc-CceEEe--cchhh---hHHHHhh-----C------chh--hcccceecc-ch
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDD---YEKLKLR-----I------PVE--AQHNLVLST-SY 521 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~-~~~v~l--~~~~~---~~~l~~~-----~------~~~--~~~~lv~~~-~~ 521 (627)
...+|+++|||| -+|+.+.+.|.++ +.+++. ++++. +...-.. + ... .+.++|.+. .-
T Consensus 37 ~~~kVaIvGATG--~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~ 114 (381)
T PLN02968 37 EKKRIFVLGASG--YTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPH 114 (381)
T ss_pred cccEEEEECCCC--hHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCH
Confidence 456999999999 9999999999965 888777 32222 1111110 1 000 123333221 11
Q ss_pred hhc-cHHHhcCCCCcEEeeCcCCCCc-CCCCCeeEecc-C-ccccCCCcccccccccccc---------ch-hHHH-HHH
Q 006894 522 AAH-KTEQARAPKGTIFIPYTQIPPR-KLRKDCFYHST-P-AMIIPPSLSNMHSCENWLG---------RR-VMSA-WRI 586 (627)
Q Consensus 522 ~~a-~~e~~~a~~G~~~~~~sq~P~~-~~R~dc~~~~~-p-~~~~P~~~~~~~~~e~~~p---------r~-~~~A-c~a 586 (627)
..+ ...++ +.+|+.+||.| .. .+++|..|-.. + ....|+-.+. +-+++| ++ +.-+ |.+
T Consensus 115 ~~s~~i~~~-~~~g~~VIDlS---s~fRl~~~~~y~~~y~~p~~~pe~~~~---~~yglpE~~r~~i~~~~iIAnPgC~~ 187 (381)
T PLN02968 115 GTTQEIIKA-LPKDLKIVDLS---ADFRLRDIAEYEEWYGHPHRAPELQKE---AVYGLTELQREEIKSARLVANPGCYP 187 (381)
T ss_pred HHHHHHHHH-HhCCCEEEEcC---chhccCCcccchhccCCCCCCcccchh---hhcccchhCHHHhcCCCEEECCCCHH
Confidence 111 12222 45799999999 66 77788888542 2 2234543221 224543 22 2222 999
Q ss_pred hHHHhhhcC
Q 006894 587 AGIIHALEG 595 (627)
Q Consensus 587 ~~~~~alEg 595 (627)
-+++++|--
T Consensus 188 t~~~laL~P 196 (381)
T PLN02968 188 TGIQLPLVP 196 (381)
T ss_pred HHHHHHHHH
Confidence 999987743
No 119
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=93.51 E-value=0.096 Score=52.55 Aligned_cols=43 Identities=19% Similarity=0.317 Sum_probs=37.4
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
.+.|+++|++| -||+++|+.|.++|.+|.+ |++++.+++.+++
T Consensus 7 ~~~vlItGasg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 51 (262)
T PRK13394 7 GKTAVVTGAAS--GIGKEIALELARAGAAVAIADLNQDGANAVADEI 51 (262)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Confidence 46899999998 9999999999999999988 8887777776665
No 120
>PRK07832 short chain dehydrogenase; Provisional
Probab=93.51 E-value=0.099 Score=53.41 Aligned_cols=42 Identities=14% Similarity=0.172 Sum_probs=35.9
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
+.++++|++| -||+++|+.|+++|.+|.+ |+.+..+++.+++
T Consensus 1 k~vlItGas~--giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~ 44 (272)
T PRK07832 1 KRCFVTGAAS--GIGRATALRLAAQGAELFLTDRDADGLAQTVADA 44 (272)
T ss_pred CEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 3689999998 9999999999999999888 7777777766554
No 121
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=93.48 E-value=0.1 Score=52.28 Aligned_cols=46 Identities=15% Similarity=0.197 Sum_probs=38.6
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 509 (627)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.+
T Consensus 11 ~~k~vlItG~~g--~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~ 58 (247)
T PRK08945 11 KDRIILVTGAGD--GIGREAALTYARHGATVILLGRTEEKLEAVYDEIEA 58 (247)
T ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHh
Confidence 456899999998 9999999999999999988 887777777666543
No 122
>PRK07677 short chain dehydrogenase; Provisional
Probab=93.46 E-value=0.099 Score=52.62 Aligned_cols=43 Identities=26% Similarity=0.392 Sum_probs=37.7
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+++++++.
T Consensus 2 k~~lItG~s~--giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~ 46 (252)
T PRK07677 2 KVVIITGGSS--GMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIE 46 (252)
T ss_pred CEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 5789999998 9999999999999999988 88888888776654
No 123
>PRK08177 short chain dehydrogenase; Provisional
Probab=93.44 E-value=0.11 Score=51.59 Aligned_cols=39 Identities=15% Similarity=0.198 Sum_probs=33.9
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHH
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~ 504 (627)
+.|+++|++| .||+++|+.|+++|.+|++ |+.++.++++
T Consensus 2 k~vlItG~sg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 42 (225)
T PRK08177 2 RTALIIGASR--GLGLGLVDRLLERGWQVTATVRGPQQDTALQ 42 (225)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHhCCCEEEEEeCCCcchHHHH
Confidence 5799999998 9999999999999999998 7777666554
No 124
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=93.40 E-value=0.11 Score=52.42 Aligned_cols=43 Identities=16% Similarity=0.231 Sum_probs=36.7
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 3 k~ilItG~~~--~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~ 47 (259)
T PRK12384 3 QVAVVIGGGQ--TLGAFLCHGLAEEGYRVAVADINSEKAANVAQEIN 47 (259)
T ss_pred CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence 5799999998 9999999999999999988 77777777766543
No 125
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=93.40 E-value=0.11 Score=51.21 Aligned_cols=43 Identities=23% Similarity=0.298 Sum_probs=36.8
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
+.|+++|++| .||+.+|+.|.++|.+|.+ |++++.+.+..++.
T Consensus 6 ~~ilItGasg--~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~ 50 (246)
T PRK05653 6 KTALVTGASR--GIGRAIALRLAADGAKVVIYDSNEEAAEALAAELR 50 (246)
T ss_pred CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHH
Confidence 5799999998 9999999999999999888 88888777665543
No 126
>PRK12939 short chain dehydrogenase; Provisional
Probab=93.39 E-value=0.12 Score=51.42 Aligned_cols=43 Identities=21% Similarity=0.265 Sum_probs=36.9
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+.+.+++
T Consensus 7 ~~~vlItGa~g--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 51 (250)
T PRK12939 7 GKRALVTGAAR--GLGAAFAEALAEAGATVAFNDGLAAEARELAAAL 51 (250)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 46899999998 9999999999999999887 7777777776554
No 127
>PRK07074 short chain dehydrogenase; Provisional
Probab=93.38 E-value=0.12 Score=52.08 Aligned_cols=43 Identities=16% Similarity=0.203 Sum_probs=37.5
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+.+.+++.
T Consensus 3 k~ilItGat~--~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~ 47 (257)
T PRK07074 3 RTALVTGAAG--GIGQALARRFLAAGDRVLALDIDAAALAAFADALG 47 (257)
T ss_pred CEEEEECCcc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc
Confidence 5799999998 9999999999999999988 88888887776653
No 128
>PRK08263 short chain dehydrogenase; Provisional
Probab=93.36 E-value=0.12 Score=52.80 Aligned_cols=42 Identities=12% Similarity=0.094 Sum_probs=36.5
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.++++++.
T Consensus 4 k~vlItGasg--~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~ 47 (275)
T PRK08263 4 KVWFITGASR--GFGRAWTEAALERGDRVVATARDTATLADLAEKY 47 (275)
T ss_pred CEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc
Confidence 5799999998 9999999999999999888 8888877776554
No 129
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=93.35 E-value=0.12 Score=52.24 Aligned_cols=43 Identities=14% Similarity=0.241 Sum_probs=35.5
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+ ++.+++++++
T Consensus 14 ~~k~vlItGas~--gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~ 58 (258)
T PRK06935 14 DGKVAIVTGGNT--GLGQGYAVALAKAGADIIITTHG-TNWDETRRLI 58 (258)
T ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHH
Confidence 457899999998 9999999999999999988 55 5566665554
No 130
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=93.34 E-value=0.11 Score=51.90 Aligned_cols=42 Identities=19% Similarity=0.133 Sum_probs=34.9
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe---cchhhhHHHHhhC
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~ 507 (627)
+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++
T Consensus 3 k~ilItGas~--giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 47 (248)
T PRK06947 3 KVVLITGASR--GIGRATAVLAAARGWSVGINYARDAAAAEETADAV 47 (248)
T ss_pred cEEEEeCCCC--cHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence 5799999998 9999999999999999876 5666666665554
No 131
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=93.33 E-value=0.084 Score=55.87 Aligned_cols=45 Identities=20% Similarity=0.271 Sum_probs=38.6
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 509 (627)
.+.|+++||++ =||.++|.-|+++|.++.+ |+.+|++++++++.+
T Consensus 12 ~kvVvITGASs--GIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~ 58 (282)
T KOG1205|consen 12 GKVVLITGASS--GIGEALAYELAKRGAKLVLVARRARRLERVAEELRK 58 (282)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHH
Confidence 56789999995 9999999999999999877 899999988766444
No 132
>PRK07774 short chain dehydrogenase; Provisional
Probab=93.32 E-value=0.11 Score=51.74 Aligned_cols=43 Identities=21% Similarity=0.338 Sum_probs=36.5
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
.+.|+++|++| -||+++|+.|.++|.+|.+ |+++..+++++++
T Consensus 6 ~k~vlItGasg--~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~ 50 (250)
T PRK07774 6 DKVAIVTGAAG--GIGQAYAEALAREGASVVVADINAEGAERVAKQI 50 (250)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 36799999998 9999999999999999998 7766666666554
No 133
>PRK06914 short chain dehydrogenase; Provisional
Probab=93.29 E-value=0.12 Score=52.82 Aligned_cols=42 Identities=14% Similarity=0.135 Sum_probs=36.4
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++++++
T Consensus 4 k~~lItGasg--~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 47 (280)
T PRK06914 4 KIAIVTGASS--GFGLLTTLELAKKGYLVIATMRNPEKQENLLSQA 47 (280)
T ss_pred CEEEEECCCc--hHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHH
Confidence 5789999998 9999999999999999988 8888777776553
No 134
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=93.28 E-value=0.11 Score=53.12 Aligned_cols=44 Identities=23% Similarity=0.256 Sum_probs=38.3
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
.+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 10 ~k~vlVtGas~--giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 55 (278)
T PRK08277 10 GKVAVITGGGG--VLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIK 55 (278)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 46799999998 9999999999999999998 88888887777654
No 135
>PRK07831 short chain dehydrogenase; Provisional
Probab=93.27 E-value=0.11 Score=52.65 Aligned_cols=46 Identities=15% Similarity=0.175 Sum_probs=37.4
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 509 (627)
.+.|+++|++| +-||+++|+.|+++|.+|.+ |+.++.+...+++.+
T Consensus 17 ~k~vlItG~sg-~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~ 64 (262)
T PRK07831 17 GKVVLVTAAAG-TGIGSATARRALEEGARVVISDIHERRLGETADELAA 64 (262)
T ss_pred CCEEEEECCCc-ccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHH
Confidence 46899999997 35999999999999999998 777777766655543
No 136
>PRK08589 short chain dehydrogenase; Validated
Probab=93.26 E-value=0.11 Score=53.28 Aligned_cols=43 Identities=23% Similarity=0.278 Sum_probs=36.6
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+ ++.+++.+++.
T Consensus 6 ~k~vlItGas~--gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~ 50 (272)
T PRK08589 6 NKVAVITGAST--GIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIK 50 (272)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHH
Confidence 46899999998 9999999999999999998 76 77777666654
No 137
>PRK06138 short chain dehydrogenase; Provisional
Probab=93.20 E-value=0.13 Score=51.27 Aligned_cols=44 Identities=16% Similarity=0.231 Sum_probs=37.4
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
.+.++++|++| .||+++|+.|.++|.+|.+ |+.++.+...+++.
T Consensus 5 ~k~~lItG~sg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 50 (252)
T PRK06138 5 GRVAIVTGAGS--GIGRATAKLFAREGARVVVADRDAEAAERVAAAIA 50 (252)
T ss_pred CcEEEEeCCCc--hHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh
Confidence 46899999998 9999999999999999988 88887777666543
No 138
>PRK05599 hypothetical protein; Provisional
Probab=93.19 E-value=0.11 Score=52.43 Aligned_cols=42 Identities=21% Similarity=0.369 Sum_probs=36.8
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 509 (627)
.|+++|+++ -||+++|+.|++ |.+|.+ |++++.+++.+++.+
T Consensus 2 ~vlItGas~--GIG~aia~~l~~-g~~Vil~~r~~~~~~~~~~~l~~ 45 (246)
T PRK05599 2 SILILGGTS--DIAGEIATLLCH-GEDVVLAARRPEAAQGLASDLRQ 45 (246)
T ss_pred eEEEEeCcc--HHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHHHHh
Confidence 589999997 999999999995 999999 999999988877644
No 139
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=93.19 E-value=0.14 Score=50.76 Aligned_cols=43 Identities=19% Similarity=0.247 Sum_probs=36.4
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
.+.|+++|++| -||+++|+.|+++|..|.+ |+.++.+++.+++
T Consensus 6 ~~~vlItGa~g--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~ 50 (245)
T PRK12936 6 GRKALVTGASG--GIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL 50 (245)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence 46899999998 9999999999999999887 7777777766554
No 140
>PRK05650 short chain dehydrogenase; Provisional
Probab=93.18 E-value=0.11 Score=52.82 Aligned_cols=41 Identities=17% Similarity=0.296 Sum_probs=35.4
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
+|+++|++| -||+++|+.|+++|.+|++ |+.++.+++.+++
T Consensus 2 ~vlVtGasg--gIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l 44 (270)
T PRK05650 2 RVMITGAAS--GLGRAIALRWAREGWRLALADVNEEGGEETLKLL 44 (270)
T ss_pred EEEEecCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 689999998 9999999999999999988 7777777665554
No 141
>PRK05693 short chain dehydrogenase; Provisional
Probab=93.16 E-value=0.13 Score=52.49 Aligned_cols=40 Identities=25% Similarity=0.318 Sum_probs=34.5
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHh
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 505 (627)
+.|+++||+| -||+++|+.|+++|.+|++ |+.++.+.+++
T Consensus 2 k~vlItGasg--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 43 (274)
T PRK05693 2 PVVLITGCSS--GIGRALADAFKAAGYEVWATARKAEDVEALAA 43 (274)
T ss_pred CEEEEecCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 4789999998 9999999999999999988 77777766643
No 142
>PRK09242 tropinone reductase; Provisional
Probab=93.15 E-value=0.12 Score=52.10 Aligned_cols=44 Identities=16% Similarity=0.228 Sum_probs=38.3
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
.+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 9 ~k~~lItGa~~--gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~ 54 (257)
T PRK09242 9 GQTALITGASK--GIGLAIAREFLGLGADVLIVARDADALAQARDELA 54 (257)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH
Confidence 46899999998 9999999999999999988 88888887776653
No 143
>PRK07775 short chain dehydrogenase; Provisional
Probab=93.06 E-value=0.13 Score=52.70 Aligned_cols=44 Identities=25% Similarity=0.288 Sum_probs=36.4
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
+.+.|+|+|++| -||+++|+.|.++|.+|.+ |+.++.+++.+++
T Consensus 9 ~~~~vlVtGa~g--~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~ 54 (274)
T PRK07775 9 DRRPALVAGASS--GIGAATAIELAAAGFPVALGARRVEKCEELVDKI 54 (274)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 346899999998 9999999999999999877 7777776665543
No 144
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=93.05 E-value=0.13 Score=51.55 Aligned_cols=43 Identities=19% Similarity=0.304 Sum_probs=36.5
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
++|+++|++| -||+++++.|+++|.+|++ |+.++.+++.+++.
T Consensus 1 k~~lItG~sg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~ 45 (254)
T TIGR02415 1 KVALVTGGAQ--GIGKGIAERLAKDGFAVAVADLNEETAKETAKEIN 45 (254)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 4689999998 9999999999999999988 77777777666543
No 145
>PRK07814 short chain dehydrogenase; Provisional
Probab=93.03 E-value=0.14 Score=52.00 Aligned_cols=44 Identities=14% Similarity=0.243 Sum_probs=37.9
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
..+.|+++|++| -||+++|+.|.++|.+|.+ |+.++.+++.+++
T Consensus 9 ~~~~vlItGasg--gIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l 54 (263)
T PRK07814 9 DDQVAVVTGAGR--GLGAAIALAFAEAGADVLIAARTESQLDEVAEQI 54 (263)
T ss_pred CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 456899999998 9999999999999999988 8888877776664
No 146
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=93.00 E-value=0.14 Score=50.95 Aligned_cols=44 Identities=20% Similarity=0.312 Sum_probs=37.2
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
.+.|+++|++| -||+++|+.|.++|.+|.+ |+.++.+++.+++.
T Consensus 3 ~~~ilItGas~--~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~ 48 (250)
T TIGR03206 3 DKTAIVTGGGG--GIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIR 48 (250)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHH
Confidence 36799999998 9999999999999999988 77777777666543
No 147
>PRK06953 short chain dehydrogenase; Provisional
Probab=93.00 E-value=0.14 Score=50.61 Aligned_cols=40 Identities=15% Similarity=0.161 Sum_probs=34.5
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHh
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 505 (627)
+.|+++|++| .||+++|+.|+++|.+|.+ |+.++.++++.
T Consensus 2 ~~vlvtG~sg--~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~ 43 (222)
T PRK06953 2 KTVLIVGASR--GIGREFVRQYRADGWRVIATARDAAALAALQA 43 (222)
T ss_pred ceEEEEcCCC--chhHHHHHHHHhCCCEEEEEECCHHHHHHHHh
Confidence 4689999998 9999999999999999988 77777766654
No 148
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.99 E-value=0.15 Score=50.77 Aligned_cols=43 Identities=19% Similarity=0.339 Sum_probs=37.1
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+.+.+++
T Consensus 7 ~~~vlVtG~sg--~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~ 51 (239)
T PRK07666 7 GKNALITGAGR--GIGRAVAIALAKEGVNVGLLARTEENLKAVAEEV 51 (239)
T ss_pred CCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 36799999998 9999999999999999988 8888777776665
No 149
>PRK07904 short chain dehydrogenase; Provisional
Probab=92.90 E-value=0.14 Score=52.20 Aligned_cols=45 Identities=13% Similarity=0.207 Sum_probs=37.1
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhcc-CceEEe--cchhh-hHHHHhhCch
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDD-YEKLKLRIPV 509 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~-~~~v~l--~~~~~-~~~l~~~~~~ 509 (627)
.+.|+++|++| -||+++|+.|+++ |.+|.+ |+.++ .+++.+++..
T Consensus 8 ~~~vlItGas~--giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~ 56 (253)
T PRK07904 8 PQTILLLGGTS--EIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKA 56 (253)
T ss_pred CcEEEEEcCCc--HHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHh
Confidence 34799999998 9999999999988 489888 88776 7777766544
No 150
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.89 E-value=0.14 Score=50.49 Aligned_cols=42 Identities=21% Similarity=0.284 Sum_probs=33.6
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe---cchhhhHHHHhhC
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~ 507 (627)
++|+++|++| .||+++|+.|+++|.+|++ ++.++.+.+.+++
T Consensus 7 ~~vlItGasg--~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 51 (249)
T PRK12825 7 RVALVTGAAR--GLGRAIALRLARAGADVVVHYRSDEEAAEELVEAV 51 (249)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHH
Confidence 5899999999 9999999999999999776 4444555555443
No 151
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=92.87 E-value=0.16 Score=49.56 Aligned_cols=75 Identities=15% Similarity=0.196 Sum_probs=46.9
Q ss_pred CCCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCchhhcccceeccchhhccHHHhcCCCCcE
Q 006894 459 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAAHKTEQARAPKGTI 536 (627)
Q Consensus 459 ip~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~lv~~~~~~~a~~e~~~a~~G~~ 536 (627)
++-.-++|+++|..+ -||+-++..|.++|..|++ .+.+.+++.- ++.++|-+..-+......++.++|+.
T Consensus 32 ~~l~Gk~v~VvGrs~--~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~------~~ADIVVsa~G~~~~i~~~~ik~gav 103 (160)
T PF02882_consen 32 IDLEGKKVVVVGRSN--IVGKPLAMLLLNKGATVTICHSKTKNLQEIT------RRADIVVSAVGKPNLIKADWIKPGAV 103 (160)
T ss_dssp -STTT-EEEEE-TTT--TTHHHHHHHHHHTT-EEEEE-TTSSSHHHHH------TTSSEEEE-SSSTT-B-GGGS-TTEE
T ss_pred CCCCCCEEEEECCcC--CCChHHHHHHHhCCCeEEeccCCCCccccee------eeccEEeeeeccccccccccccCCcE
Confidence 355778999999997 9999999999999999999 3333333322 23344433333334467889999999
Q ss_pred EeeCc
Q 006894 537 FIPYT 541 (627)
Q Consensus 537 ~~~~s 541 (627)
+||+.
T Consensus 104 VIDvG 108 (160)
T PF02882_consen 104 VIDVG 108 (160)
T ss_dssp EEE--
T ss_pred EEecC
Confidence 99998
No 152
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=92.85 E-value=0.15 Score=50.21 Aligned_cols=43 Identities=23% Similarity=0.315 Sum_probs=33.5
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchh-hhHHHHhhC
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD-DYEKLKLRI 507 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~-~~~~l~~~~ 507 (627)
.+.|+++|++| .||+++|+.|+++|.+|.+ |+.+ +.+++.+++
T Consensus 5 ~~~vlItG~sg--~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~ 50 (248)
T PRK05557 5 GKVALVTGASR--GIGRAIAERLAAQGANVVINYASSEAGAEALVAEI 50 (248)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH
Confidence 46899999998 9999999999999999966 4433 455555444
No 153
>PRK12746 short chain dehydrogenase; Provisional
Probab=92.82 E-value=0.15 Score=51.14 Aligned_cols=42 Identities=24% Similarity=0.237 Sum_probs=35.4
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe---cchhhhHHHHhhC
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~ 507 (627)
+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++
T Consensus 7 ~~ilItGasg--~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~ 51 (254)
T PRK12746 7 KVALVTGASR--GIGRAIAMRLANDGALVAIHYGRNKQAADETIREI 51 (254)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 6899999998 9999999999999999865 7777776666554
No 154
>PRK09135 pteridine reductase; Provisional
Probab=92.82 E-value=0.15 Score=50.49 Aligned_cols=43 Identities=21% Similarity=0.363 Sum_probs=34.9
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--c-chhhhHHHHhhC
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI 507 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~-~~~~~~~l~~~~ 507 (627)
.+.|+++|++| -||+.+|+.|+++|.+|.+ | ++++.+.+++++
T Consensus 6 ~~~vlItGa~g--~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~ 51 (249)
T PRK09135 6 AKVALITGGAR--RIGAAIARTLHAAGYRVAIHYHRSAAEADALAAEL 51 (249)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 46899999998 9999999999999999988 4 345566665544
No 155
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=92.76 E-value=0.14 Score=51.88 Aligned_cols=44 Identities=14% Similarity=0.290 Sum_probs=36.3
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe---cchhhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~ 508 (627)
.+.|+++|+++ -||+++|+.|+++|.+|.+ +++++.+++.+++.
T Consensus 8 ~k~vlItGas~--gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~ 54 (260)
T PRK08416 8 GKTLVISGGTR--GIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLE 54 (260)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 46899999997 9999999999999999987 45667777665553
No 156
>PRK06199 ornithine cyclodeaminase; Validated
Probab=92.75 E-value=0.54 Score=51.75 Aligned_cols=99 Identities=14% Similarity=0.167 Sum_probs=67.6
Q ss_pred cCCcEEEecccccccccccCCceeEecCCC-cccceeecCChhHH-------HHHHhcC-CCCCcEEEEeccCCChhhHH
Q 006894 409 KGVKVISLGLLNQGEELNRNGEIYLERQPN-KLKIKVVDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVAN 479 (627)
Q Consensus 409 ~G~kv~~LG~ln~~e~ln~~g~~~~~r~p~-~L~irvv~Gnslta-------avv~~~i-p~~~~~V~l~Gatg~~kig~ 479 (627)
.|+|+++.=-=|....+..-.++.+--+|+ +.-.-+.||+.+|+ |+..+-+ +++.+.+.++|+- -.|+
T Consensus 92 ~gvK~v~~~p~N~~~glp~~~g~v~L~D~~TG~p~Ai~dg~~lTa~RTaA~salaa~~LAr~da~~l~iiG~G---~QA~ 168 (379)
T PRK06199 92 AGVKWYGSNIANREKGLPRSILMFVLNDADTGAPLAIMSANLLSAYRTGAVPGVGARHLARKDSKVVGLLGPG---VMGK 168 (379)
T ss_pred eEEEEeccCCCccccCCCceeEEEEEeeCCCCceEEEEcCcchhhhHHHHHHHHHHHHhccCCCCEEEEECCc---HHHH
Confidence 577877743333323333344445555544 34479999999985 4455666 6788899999987 8999
Q ss_pred HHHHHHhc-c--CceEEe--cchhhhHHHHhhCchh
Q 006894 480 AVASSLCQ-M--GIKVAT--ICKDDYEKLKLRIPVE 510 (627)
Q Consensus 480 ava~~L~~-~--~~~v~l--~~~~~~~~l~~~~~~~ 510 (627)
.-++++|+ + -.+|.+ |++++-+++.+++.+.
T Consensus 169 ~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~ 204 (379)
T PRK06199 169 TILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAET 204 (379)
T ss_pred HHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHh
Confidence 99999995 3 346666 9999888877766543
No 157
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.75 E-value=0.16 Score=53.78 Aligned_cols=97 Identities=14% Similarity=0.169 Sum_probs=63.5
Q ss_pred hHHHHHHhcC-----CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe-cchhhhHHHHhhCchhhcccceeccchhh
Q 006894 450 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLVLSTSYAA 523 (627)
Q Consensus 450 ltaavv~~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~~~~~~~~lv~~~~~~~ 523 (627)
-|++.|++=+ +-.-++|.++|..| -+|+.+|..|.++|..|++ .++.+ ++++. -++.++|.+.--..
T Consensus 140 cTp~avi~lL~~~~i~l~Gk~v~vIG~S~--ivG~Pla~lL~~~gatVtv~~s~t~--~l~~~---~~~ADIVI~avg~~ 212 (284)
T PRK14179 140 CTPAGIMEMFREYNVELEGKHAVVIGRSN--IVGKPMAQLLLDKNATVTLTHSRTR--NLAEV---ARKADILVVAIGRG 212 (284)
T ss_pred CCHHHHHHHHHHhCCCCCCCEEEEECCCC--cCcHHHHHHHHHCCCEEEEECCCCC--CHHHH---HhhCCEEEEecCcc
Confidence 3666666544 44678999999998 9999999999999999999 32222 22211 13344443332222
Q ss_pred ccHHHhcCCCCcEEeeCcCCCC--c-CCCCCeeE
Q 006894 524 HKTEQARAPKGTIFIPYTQIPP--R-KLRKDCFY 554 (627)
Q Consensus 524 a~~e~~~a~~G~~~~~~sq~P~--~-~~R~dc~~ 554 (627)
...+..++++|++++|++ .-. . ++..|+-+
T Consensus 213 ~~v~~~~ik~GavVIDvg-in~~~~gkl~GDVdf 245 (284)
T PRK14179 213 HFVTKEFVKEGAVVIDVG-MNRDENGKLIGDVDF 245 (284)
T ss_pred ccCCHHHccCCcEEEEec-ceecCCCCeecCccH
Confidence 235567899999999998 332 1 34456554
No 158
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=92.73 E-value=0.36 Score=53.68 Aligned_cols=118 Identities=22% Similarity=0.296 Sum_probs=76.1
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe---cchhhhHHHHhhCch------h-----hcccce-eccc-----h
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPV------E-----AQHNLV-LSTS-----Y 521 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~~------~-----~~~~lv-~~~~-----~ 521 (627)
..++|+++||. ++|.-+|++|+++|++.++ |+.+|-++|.+++.. + ...++| .+|+ +
T Consensus 177 ~~~~vlvIGAG---em~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~~l~el~~~l~~~DvVissTsa~~~ii 253 (414)
T COG0373 177 KDKKVLVIGAG---EMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVALEELLEALAEADVVISSTSAPHPII 253 (414)
T ss_pred ccCeEEEEccc---HHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeeecHHHHHHhhhhCCEEEEecCCCcccc
Confidence 68899999998 9999999999999865555 999999999988772 2 223334 2332 1
Q ss_pred h-hccHHHhcCCCCcEEeeCcCCCCc---CCC--CCeeEeccCccccCCCccccccccccccchhHHHHHHhHHHh
Q 006894 522 A-AHKTEQARAPKGTIFIPYTQIPPR---KLR--KDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIH 591 (627)
Q Consensus 522 ~-~a~~e~~~a~~G~~~~~~sq~P~~---~~R--~dc~~~~~p~~~~P~~~~~~~~~e~~~pr~~~~Ac~a~~~~~ 591 (627)
. +..++..+.+++-.++|.+ +|+. +.. +|+.+.+..-+ +.+ .+-.+-.|.-.|=.|+.||-
T Consensus 254 ~~~~ve~a~~~r~~~livDia-vPRdie~~v~~l~~v~l~~iDDL------~~i--v~~n~~~R~~~~~~ae~iIe 320 (414)
T COG0373 254 TREMVERALKIRKRLLIVDIA-VPRDVEPEVGELPNVFLYTIDDL------EEI--VEENLEARKEEAAKAEAIIE 320 (414)
T ss_pred CHHHHHHHHhcccCeEEEEec-CCCCCCccccCcCCeEEEehhhH------HHH--HHHhHHHHHHHHHHHHHHHH
Confidence 1 1125566667777888999 9966 222 45555554333 211 12334455555566666654
No 159
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=92.72 E-value=0.13 Score=51.91 Aligned_cols=38 Identities=24% Similarity=0.269 Sum_probs=35.4
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHH
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~ 504 (627)
.|+|+|||| .||+++|+.|.++|.+|.. |+.++...+.
T Consensus 2 ~ilV~GatG--~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~ 41 (275)
T COG0702 2 KILVTGATG--FVGGAVVRELLARGHEVRAAVRNPEAAAALA 41 (275)
T ss_pred eEEEEeccc--chHHHHHHHHHhCCCEEEEEEeCHHHHHhhc
Confidence 689999999 9999999999999999998 9999888887
No 160
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=92.72 E-value=0.16 Score=53.55 Aligned_cols=44 Identities=16% Similarity=0.117 Sum_probs=38.3
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccC-ceEEe--cchhhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~~~ 508 (627)
.+.|+++|+++ -||+++|+.|+++| .+|.+ |++++.+++++++.
T Consensus 3 ~k~vlITGas~--GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~ 49 (314)
T TIGR01289 3 KPTVIITGASS--GLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLG 49 (314)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc
Confidence 45889999997 99999999999999 99988 88888888877654
No 161
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.66 E-value=0.21 Score=52.94 Aligned_cols=152 Identities=22% Similarity=0.260 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEe--c-------ccccccccccCC---ceeEec-CCCcccc----------eeecCCh-
Q 006894 394 AINSLIEEAILEADAKGVKVISL--G-------LLNQGEELNRNG---EIYLER-QPNKLKI----------KVVDGSS- 449 (627)
Q Consensus 394 ~in~~Ie~Ai~~A~~~G~kv~~L--G-------~ln~~e~ln~~g---~~~~~r-~p~~L~i----------rvv~Gns- 449 (627)
+-+.-++..++.|++.|++..-. . .+...++||.|- ++.+.. -|++++. +=|||=+
T Consensus 45 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~ 124 (285)
T PRK14189 45 ASQVYVRNKVKACEDNGFHSLKDRYPADLSEAELLARIDELNRDPKIHGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHV 124 (285)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhhcCcccCcccCCh
Confidence 34445666677888888876443 3 223336677764 333331 1232331 2245543
Q ss_pred ---------------hHHHHHHhc-----CCCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 450 ---------------LAAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 450 ---------------ltaavv~~~-----ip~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
-|+..|++= |+-..++|.++|.++ -||+-+|..|.++|..|++ ...+.++ +.+
T Consensus 125 ~n~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~--iVGkPla~lL~~~~atVt~~hs~t~~l~---~~~ 199 (285)
T PRK14189 125 ANAGALMTGQPLFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSN--IVGKPMAMLLLQAGATVTICHSKTRDLA---AHT 199 (285)
T ss_pred hhhhHhhCCCCCCcCCCHHHHHHHHHHcCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEecCCCCCHH---HHh
Confidence 256666554 345688999999997 8999999999999999998 2222222 111
Q ss_pred chhhcccceeccchhhccHHHhcCCCCcEEeeCcCCCC--c-CCCCCeeE
Q 006894 508 PVEAQHNLVLSTSYAAHKTEQARAPKGTIFIPYTQIPP--R-KLRKDCFY 554 (627)
Q Consensus 508 ~~~~~~~lv~~~~~~~a~~e~~~a~~G~~~~~~sq~P~--~-~~R~dc~~ 554 (627)
++.++|-+..-.+.....+++++|++++|+. .-+ . ++-.|+-+
T Consensus 200 ---~~ADIVV~avG~~~~i~~~~ik~gavVIDVG-in~~~~gkl~GDVd~ 245 (285)
T PRK14189 200 ---RQADIVVAAVGKRNVLTADMVKPGATVIDVG-MNRDDAGKLCGDVDF 245 (285)
T ss_pred ---hhCCEEEEcCCCcCccCHHHcCCCCEEEEcc-ccccCCCCeeCCccH
Confidence 2333442222223346679999999999998 443 1 44466654
No 162
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=92.64 E-value=0.16 Score=51.51 Aligned_cols=39 Identities=18% Similarity=0.242 Sum_probs=33.4
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHH
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL 503 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l 503 (627)
.++|+++||+| .||+++++.|.++|.+|+. |+.++.+++
T Consensus 17 ~~~ilItGasG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~ 57 (251)
T PLN00141 17 TKTVFVAGATG--RTGKRIVEQLLAKGFAVKAGVRDVDKAKTS 57 (251)
T ss_pred CCeEEEECCCc--HHHHHHHHHHHhCCCEEEEEecCHHHHHHh
Confidence 56899999999 9999999999999999876 777765544
No 163
>PRK06181 short chain dehydrogenase; Provisional
Probab=92.60 E-value=0.16 Score=51.31 Aligned_cols=43 Identities=16% Similarity=0.282 Sum_probs=36.1
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
+.|+++|++| .||+++|+.|+++|.+|++ |+.++.+++.+++.
T Consensus 2 ~~vlVtGasg--~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~ 46 (263)
T PRK06181 2 KVVIITGASE--GIGRALAVRLARAGAQLVLAARNETRLASLAQELA 46 (263)
T ss_pred CEEEEecCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 4689999998 9999999999999999988 77777766665543
No 164
>PRK08264 short chain dehydrogenase; Validated
Probab=92.57 E-value=0.15 Score=50.52 Aligned_cols=37 Identities=22% Similarity=0.212 Sum_probs=31.8
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCc-eEEe--cchhhhH
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYE 501 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~ 501 (627)
.+.|+++|++| .||+++|+.|+++|. +|++ |+.++.+
T Consensus 6 ~~~vlItGgsg--~iG~~la~~l~~~G~~~V~~~~r~~~~~~ 45 (238)
T PRK08264 6 GKVVLVTGANR--GIGRAFVEQLLARGAAKVYAAARDPESVT 45 (238)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCcccEEEEecChhhhh
Confidence 46799999998 999999999999998 8887 7666554
No 165
>PRK07060 short chain dehydrogenase; Provisional
Probab=92.57 E-value=0.22 Score=49.45 Aligned_cols=44 Identities=23% Similarity=0.316 Sum_probs=37.5
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
..+.++++|++| -||+++|+.|+++|.+|.+ |+.++.+++.++.
T Consensus 8 ~~~~~lItGa~g--~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~ 53 (245)
T PRK07060 8 SGKSVLVTGASS--GIGRACAVALAQRGARVVAAARNAAALDRLAGET 53 (245)
T ss_pred CCCEEEEeCCcc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 446899999998 9999999999999999988 8877777776554
No 166
>PRK07576 short chain dehydrogenase; Provisional
Probab=92.56 E-value=0.18 Score=51.42 Aligned_cols=44 Identities=14% Similarity=0.288 Sum_probs=37.2
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
..+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+.+.+++
T Consensus 8 ~~k~ilItGasg--gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 53 (264)
T PRK07576 8 AGKNVVVVGGTS--GINLGIAQAFARAGANVAVASRSQEKVDAAVAQL 53 (264)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 456899999998 9999999999999999988 7877777665554
No 167
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=92.56 E-value=0.43 Score=50.67 Aligned_cols=77 Identities=16% Similarity=0.265 Sum_probs=50.1
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh---------Cchh-hcccceecc-chhh-ccHH
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR---------IPVE-AQHNLVLST-SYAA-HKTE 527 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~---------~~~~-~~~~lv~~~-~~~~-a~~e 527 (627)
..++|+++|+ | .+|++++..|.+.|.+|+. |+.++.+..++. +.+. .+.++|..+ ...- ....
T Consensus 151 ~g~kvlViG~-G--~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~~~~~l~~~l~~aDiVI~t~p~~~i~~~~ 227 (296)
T PRK08306 151 HGSNVLVLGF-G--RTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPFHLSELAEEVGKIDIIFNTIPALVLTKEV 227 (296)
T ss_pred CCCEEEEECC-c--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeeecHHHHHHHhCCCCEEEECCChhhhhHHH
Confidence 4689999997 6 8999999999999999998 666654443321 0000 223444323 1110 0122
Q ss_pred HhcCCCCcEEeeCc
Q 006894 528 QARAPKGTIFIPYT 541 (627)
Q Consensus 528 ~~~a~~G~~~~~~s 541 (627)
-+.++||+.++|.+
T Consensus 228 l~~~~~g~vIIDla 241 (296)
T PRK08306 228 LSKMPPEALIIDLA 241 (296)
T ss_pred HHcCCCCcEEEEEc
Confidence 46789999999999
No 168
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=92.54 E-value=0.23 Score=52.42 Aligned_cols=61 Identities=18% Similarity=0.175 Sum_probs=44.5
Q ss_pred ecCChhHHHHHHhcCCCCCcEEEEeccCCChhhHHHHHHHHhccCc-eEEe--cchhhhHHHHhhCc
Q 006894 445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 445 v~Gnsltaavv~~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~ 508 (627)
|||-.+..+.--+......++|+++|+-| .|+|+|..|++.|+ ++++ |+.+|-++|.+++.
T Consensus 109 TD~~G~~~~l~~~~~~~~~k~vlIlGaGG---aaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~ 172 (284)
T PRK12549 109 TDWSGFAESFRRGLPDASLERVVQLGAGG---AGAAVAHALLTLGVERLTIFDVDPARAAALADELN 172 (284)
T ss_pred CCHHHHHHHHHhhccCccCCEEEEECCcH---HHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHH
Confidence 56666655553221223457899999984 79999999999887 6777 88899888877653
No 169
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=92.53 E-value=0.31 Score=48.89 Aligned_cols=131 Identities=18% Similarity=0.159 Sum_probs=84.6
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHH------hhCchh-------hcccceecc-c-h---hhc
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK------LRIPVE-------AQHNLVLST-S-Y---AAH 524 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~------~~~~~~-------~~~~lv~~~-~-~---~~a 524 (627)
+|+++||+| ++|+.++.-..+||.+|+- ||..+....+ .++-+- .+.+.|.+. . . ++.
T Consensus 2 KIaiIgAsG--~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~~~ 79 (211)
T COG2910 2 KIAIIGASG--KAGSRILKEALKRGHEVTAIVRNASKLAARQGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASDNDE 79 (211)
T ss_pred eEEEEecCc--hhHHHHHHHHHhCCCeeEEEEeChHhccccccceeecccccChhhhHhhhcCCceEEEeccCCCCChhH
Confidence 689999999 9999999999999999998 9998875532 222221 122322111 0 1 000
Q ss_pred --------cHH-----------------HhcCCCCcEEeeCcCCCCc-------------CCC----CCeeEeccCcccc
Q 006894 525 --------KTE-----------------QARAPKGTIFIPYTQIPPR-------------KLR----KDCFYHSTPAMII 562 (627)
Q Consensus 525 --------~~e-----------------~~~a~~G~~~~~~sq~P~~-------------~~R----~dc~~~~~p~~~~ 562 (627)
+.+ ...+-+|+..+|.-+||.. .+| =|-+|.+-+++-.
T Consensus 80 ~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~WTfvSPaa~f~ 159 (211)
T COG2910 80 LHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLDWTFVSPAAFFE 159 (211)
T ss_pred HHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHHHHHHHhhccCcceEEeCcHHhcC
Confidence 111 2345678999999999911 233 5788888888877
Q ss_pred CCCccc-cc------cccccccchhHHHHHHhHHHhhhcCCC
Q 006894 563 PPSLSN-MH------SCENWLGRRVMSAWRIAGIIHALEGWD 597 (627)
Q Consensus 563 P~~~~~-~~------~~e~~~pr~~~~Ac~a~~~~~alEg~~ 597 (627)
|+.=.| +. -.|-.=..|..+|=-|.+||-++|.=.
T Consensus 160 PGerTg~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~ 201 (211)
T COG2910 160 PGERTGNYRLGGDQLLVNAKGESRISYADYAIAVLDELEKPQ 201 (211)
T ss_pred CccccCceEeccceEEEcCCCceeeeHHHHHHHHHHHHhccc
Confidence 863110 00 012233478899999999999999743
No 170
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=92.47 E-value=0.19 Score=50.72 Aligned_cols=44 Identities=16% Similarity=0.251 Sum_probs=37.7
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
..+.|+++|++| -||+++|+.|+++|.++.+ |+.++.+++.+++
T Consensus 10 ~~k~vlVtG~s~--gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l 55 (255)
T PRK06113 10 DGKCAIITGAGA--GIGKEIAITFATAGASVVVSDINADAANHVVDEI 55 (255)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence 357899999998 9999999999999999988 7777777776654
No 171
>PRK06484 short chain dehydrogenase; Validated
Probab=92.39 E-value=0.21 Score=56.03 Aligned_cols=45 Identities=18% Similarity=0.209 Sum_probs=39.9
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
..+.++++|++| -||+++|+.|+++|.+|.+ |++++++++++++.
T Consensus 268 ~~k~~lItGas~--gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 314 (520)
T PRK06484 268 SPRVVAITGGAR--GIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALG 314 (520)
T ss_pred CCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC
Confidence 456899999998 9999999999999999998 88888988887664
No 172
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.36 E-value=0.22 Score=49.72 Aligned_cols=44 Identities=23% Similarity=0.323 Sum_probs=35.5
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe---cchhhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~ 508 (627)
.+.++++|++| -||+++|+.|+++|.+|.+ |++++.+++.++++
T Consensus 5 ~k~ilItGas~--gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~ 51 (253)
T PRK08642 5 EQTVLVTGGSR--GLGAAIARAFAREGARVVVNYHQSEDAAEALADELG 51 (253)
T ss_pred CCEEEEeCCCC--cHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhC
Confidence 36799999998 9999999999999999976 45566666665543
No 173
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.32 E-value=0.19 Score=53.63 Aligned_cols=142 Identities=15% Similarity=0.135 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHHHHHcCCcE--EEecc-------cccccccccCC---ceeEec-CCCcccc----------eeecCCh
Q 006894 393 EAINSLIEEAILEADAKGVKV--ISLGL-------LNQGEELNRNG---EIYLER-QPNKLKI----------KVVDGSS 449 (627)
Q Consensus 393 ~~in~~Ie~Ai~~A~~~G~kv--~~LG~-------ln~~e~ln~~g---~~~~~r-~p~~L~i----------rvv~Gns 449 (627)
++-+.-++..++.|++.|+++ +-|-. ++..++||.|- ++.++. -|++++. +=|||=+
T Consensus 44 ~~s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~i~~lN~d~~V~GIlvq~Plp~~~~~~~i~~~I~p~KDVDGl~ 123 (296)
T PRK14188 44 PASQVYVRSKGKQTKEAGMASFEHKLPADTSQAELLALIARLNADPAIHGILVQLPLPKHLDSEAVIQAIDPEKDVDGLH 123 (296)
T ss_pred hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCHHHHHhccCcccccccCC
Confidence 345555777788899999974 44432 22235677773 334432 1332331 2245543
Q ss_pred ----------------hHHHHHHhcC-----CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe-cchhhhHHHHhhC
Q 006894 450 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 507 (627)
Q Consensus 450 ----------------ltaavv~~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~ 507 (627)
-|+..|++=+ +-.-++|.++|.++ -+|+.+|+.|.++|..|++ .++.+ ++++.+
T Consensus 124 ~~n~g~l~~~~~~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~--~mG~PmA~~L~~~g~tVtv~~~rT~--~l~e~~ 199 (296)
T PRK14188 124 VVNAGRLATGETALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSN--LVGKPMAQLLLAANATVTIAHSRTR--DLPAVC 199 (296)
T ss_pred hhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCc--chHHHHHHHHHhCCCEEEEECCCCC--CHHHHH
Confidence 3566666433 44688999999998 9999999999999999999 22221 122111
Q ss_pred chhhcccceeccchhhccHHHhcCCCCcEEeeCc
Q 006894 508 PVEAQHNLVLSTSYAAHKTEQARAPKGTIFIPYT 541 (627)
Q Consensus 508 ~~~~~~~lv~~~~~~~a~~e~~~a~~G~~~~~~s 541 (627)
.+.++|.+.--.....+...+++|++++|+.
T Consensus 200 ---~~ADIVIsavg~~~~v~~~~lk~GavVIDvG 230 (296)
T PRK14188 200 ---RRADILVAAVGRPEMVKGDWIKPGATVIDVG 230 (296)
T ss_pred ---hcCCEEEEecCChhhcchheecCCCEEEEcC
Confidence 2344443332223346677899999999998
No 174
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=92.30 E-value=0.17 Score=51.17 Aligned_cols=43 Identities=19% Similarity=0.255 Sum_probs=37.4
Q ss_pred EEEEeccCCChhhHHHHHHHHhc----cCceEEe--cchhhhHHHHhhCch
Q 006894 465 HVLLRGTVTANKVANAVASSLCQ----MGIKVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~----~~~~v~l--~~~~~~~~l~~~~~~ 509 (627)
.|+++|+++ -||+++|+.|++ +|.+|.+ |++++.+++++++..
T Consensus 2 ~vlItGas~--GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~ 50 (256)
T TIGR01500 2 VCLVTGASR--GFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGA 50 (256)
T ss_pred EEEEecCCC--chHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHh
Confidence 578999997 999999999997 7999888 888998888877644
No 175
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=92.24 E-value=0.18 Score=53.36 Aligned_cols=94 Identities=24% Similarity=0.255 Sum_probs=63.0
Q ss_pred HHHHHHHcCCcEEEeccccccccccc-CCceeEecCCCcccceeecCChhHHHHHHhcCCCC--CcEEEEeccCCChhhH
Q 006894 402 AILEADAKGVKVISLGLLNQGEELNR-NGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKT--TAHVLLRGTVTANKVA 478 (627)
Q Consensus 402 Ai~~A~~~G~kv~~LG~ln~~e~ln~-~g~~~~~r~p~~L~irvv~Gnsltaavv~~~ip~~--~~~V~l~Gatg~~kig 478 (627)
|+..+|+.--.--..|+-|-.. +. +|. |.===|||-.+.-+-.-+.++.. .++|++.||-|| +
T Consensus 73 ~~~~lD~l~~~A~~iGAVNTl~--~~~~g~---------l~G~NTD~~G~~~~L~~~~~~~~~~~~~vlilGAGGA---a 138 (283)
T COG0169 73 ALPLLDELSPRARLIGAVNTLV--REDDGK---------LRGYNTDGIGFLRALKEFGLPVDVTGKRVLILGAGGA---A 138 (283)
T ss_pred HHHHHhcCCHHHHHhCCceEEE--EccCCE---------EEEEcCCHHHHHHHHHhcCCCcccCCCEEEEECCcHH---H
Confidence 3444444444444456666532 22 244 22233677777766666565554 489999999984 8
Q ss_pred HHHHHHHhccCc-eEEe--cchhhhHHHHhhCch
Q 006894 479 NAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 479 ~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~ 509 (627)
+||+..|.+.|+ ++++ |+.+|.++|++...+
T Consensus 139 rAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~ 172 (283)
T COG0169 139 RAVAFALAEAGAKRITVVNRTRERAEELADLFGE 172 (283)
T ss_pred HHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhh
Confidence 999999999985 6777 999999999877553
No 176
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=92.23 E-value=0.17 Score=53.78 Aligned_cols=47 Identities=13% Similarity=0.199 Sum_probs=38.4
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe-cchhhhHHHHhhCc
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP 508 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~~ 508 (627)
..+.++++|+.+.+-||+|+|+.|+++|.+|.+ |+.++++.+..++.
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~~~~~~~l~~~~~~~~ 55 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILVGTWVPALNIFETSLR 55 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeCcchhhHHHHhhh
Confidence 356899999931138999999999999999999 88888888876553
No 177
>PRK12743 oxidoreductase; Provisional
Probab=92.21 E-value=0.2 Score=50.69 Aligned_cols=43 Identities=12% Similarity=0.168 Sum_probs=35.4
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe---cchhhhHHHHhhCc
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP 508 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~ 508 (627)
+.|+++|++| -||+++|+.|+++|.+|.+ +++++.+.+.+++.
T Consensus 3 k~vlItGas~--giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~ 48 (256)
T PRK12743 3 QVAIVTASDS--GIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVR 48 (256)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH
Confidence 5799999998 9999999999999999977 45666666665543
No 178
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=92.18 E-value=0.32 Score=52.16 Aligned_cols=96 Identities=17% Similarity=0.111 Sum_probs=61.6
Q ss_pred ee-ecCChhHH-------HHHHhcC-CCCCcEEEEeccCCChhhHHHHHHHHh-ccCc-eEEe--cchhhhHHHHhhCch
Q 006894 443 KV-VDGSSLAA-------AVVVNSL-PKTTAHVLLRGTVTANKVANAVASSLC-QMGI-KVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 443 rv-v~Gnslta-------avv~~~i-p~~~~~V~l~Gatg~~kig~ava~~L~-~~~~-~v~l--~~~~~~~~l~~~~~~ 509 (627)
-+ .||+.+|+ ++....+ +++.++|.++|+- ..|++.+++|+ .+++ +|.+ |+.++-+++.+++.+
T Consensus 100 ai~~d~~~lT~~RTaa~~~laa~~la~~~~~~v~iiGaG---~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~ 176 (326)
T TIGR02992 100 ALLLDNGYLTDVRTAAAGAVAARHLAREDSSVVAIFGAG---MQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSS 176 (326)
T ss_pred EEEcCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCC---HHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHh
Confidence 44 37777664 1222222 5677899999996 78999999998 4664 5666 999999988877654
Q ss_pred hhcccceeccchhh----cc------------HHHhcCCCCcEEeeCc
Q 006894 510 EAQHNLVLSTSYAA----HK------------TEQARAPKGTIFIPYT 541 (627)
Q Consensus 510 ~~~~~lv~~~~~~~----a~------------~e~~~a~~G~~~~~~s 541 (627)
+.+.+.....+.++ |+ ...+++++|+++..+.
T Consensus 177 ~~g~~v~~~~~~~~av~~aDiVvtaT~s~~p~i~~~~l~~g~~i~~vg 224 (326)
T TIGR02992 177 LLGIDVTAATDPRAAMSGADIIVTTTPSETPILHAEWLEPGQHVTAMG 224 (326)
T ss_pred hcCceEEEeCCHHHHhccCCEEEEecCCCCcEecHHHcCCCcEEEeeC
Confidence 32222111223332 22 3457888999888654
No 179
>PRK06841 short chain dehydrogenase; Provisional
Probab=92.17 E-value=0.24 Score=49.69 Aligned_cols=36 Identities=19% Similarity=0.306 Sum_probs=31.2
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhh
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~ 499 (627)
..+.|+++|++| .||+++|+.|+++|.+|.+ |+.+.
T Consensus 14 ~~k~vlItGas~--~IG~~la~~l~~~G~~Vi~~~r~~~~ 51 (255)
T PRK06841 14 SGKVAVVTGGAS--GIGHAIAELFAAKGARVALLDRSEDV 51 (255)
T ss_pred CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 346899999998 9999999999999999988 66543
No 180
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.12 E-value=0.36 Score=51.26 Aligned_cols=154 Identities=19% Similarity=0.203 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeEecC-CCcccc----------eeecCC-
Q 006894 393 EAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGS- 448 (627)
Q Consensus 393 ~~in~~Ie~Ai~~A~~~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~r~-p~~L~i----------rvv~Gn- 448 (627)
.+-+.-++...+.|++.|++..- |. .++..+++|.|- ++.+..= |++++. +=|||=
T Consensus 44 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PLp~~i~~~~i~~~I~p~KDVDGl~ 123 (284)
T PRK14190 44 PASHSYVRGKKKAAEKVGIYSELYEFPADITEEELLALIDRLNADPRINGILVQLPLPKHIDEKAVIERISPEKDVDGFH 123 (284)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccC
Confidence 34455566777889999988654 44 233346778875 3333321 222331 123332
Q ss_pred ---------------hhHHHHHHhc-----CCCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe-cchhhhHHHHhhC
Q 006894 449 ---------------SLAAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 507 (627)
Q Consensus 449 ---------------sltaavv~~~-----ip~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~ 507 (627)
.-|+..|++= |+-.-++|+++|.+. -||+-+|..|.++|..|++ .++. .+|++.
T Consensus 124 ~~n~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~--iVG~Pla~lL~~~~atVt~chs~t--~~l~~~- 198 (284)
T PRK14190 124 PINVGRMMLGQDTFLPCTPHGILELLKEYNIDISGKHVVVVGRSN--IVGKPVGQLLLNENATVTYCHSKT--KNLAEL- 198 (284)
T ss_pred HhhHHHHhcCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEEeCCc--hhHHHH-
Confidence 2366666643 345688999999998 9999999999999999999 2221 223221
Q ss_pred chhhcccceeccchhhccHHHhcCCCCcEEeeCcCCCCc---CCCCCeeE
Q 006894 508 PVEAQHNLVLSTSYAAHKTEQARAPKGTIFIPYTQIPPR---KLRKDCFY 554 (627)
Q Consensus 508 ~~~~~~~lv~~~~~~~a~~e~~~a~~G~~~~~~sq~P~~---~~R~dc~~ 554 (627)
-++.++|-+..-.......++.++|+++||+. .... ++-.|+-+
T Consensus 199 --~~~ADIvI~AvG~p~~i~~~~ik~gavVIDvG-i~~~~~gkl~GDvd~ 245 (284)
T PRK14190 199 --TKQADILIVAVGKPKLITADMVKEGAVVIDVG-VNRLENGKLCGDVDF 245 (284)
T ss_pred --HHhCCEEEEecCCCCcCCHHHcCCCCEEEEee-ccccCCCCeeccCcH
Confidence 23334442222222236788999999999998 5542 45566655
No 181
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=92.09 E-value=0.2 Score=49.99 Aligned_cols=30 Identities=20% Similarity=0.345 Sum_probs=28.1
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
.+.|+++|++| -||+++|+.|+++|.+|.+
T Consensus 5 ~k~vlItGas~--gIG~~ia~~l~~~G~~vi~ 34 (248)
T TIGR01832 5 GKVALVTGANT--GLGQGIAVGLAEAGADIVG 34 (248)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEE
Confidence 46899999998 9999999999999999988
No 182
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=92.08 E-value=0.21 Score=50.91 Aligned_cols=44 Identities=16% Similarity=0.290 Sum_probs=36.6
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe---cchhhhHHHHhhCch
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPV 509 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~~ 509 (627)
..|+++||+| -||+++|+.|+++|.+|.+ +++++.+.+.+++..
T Consensus 2 ~~~lITGas~--gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~ 48 (267)
T TIGR02685 2 PAAVVTGAAK--RIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNA 48 (267)
T ss_pred CEEEEeCCCC--cHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHh
Confidence 4689999998 9999999999999999988 456677777766643
No 183
>PRK08291 ectoine utilization protein EutC; Validated
Probab=92.00 E-value=0.31 Score=52.31 Aligned_cols=78 Identities=9% Similarity=-0.014 Sum_probs=50.9
Q ss_pred CCCCcEEEEeccCCChhhHHHHHHHHhc-cC-ceEEe--cchhhhHHHHhhCchhhcccceeccchhh------------
Q 006894 460 PKTTAHVLLRGTVTANKVANAVASSLCQ-MG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA------------ 523 (627)
Q Consensus 460 p~~~~~V~l~Gatg~~kig~ava~~L~~-~~-~~v~l--~~~~~~~~l~~~~~~~~~~~lv~~~~~~~------------ 523 (627)
+++.++|.++|+- ..|++.+.+|+. ++ .+|.+ |++++.+++.+++.+..+..+....+.++
T Consensus 129 ~~~~~~v~IiGaG---~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~v~~~~d~~~al~~aDiVi~aT 205 (330)
T PRK08291 129 REDASRAAVIGAG---EQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIPVTVARDVHEAVAGADIIVTTT 205 (330)
T ss_pred CCCCCEEEEECCC---HHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCceEEEeCCHHHHHccCCEEEEee
Confidence 4567799999997 679999999984 55 45666 99999999887664332222111222222
Q ss_pred ----ccHHHhcCCCCcEEeeC
Q 006894 524 ----HKTEQARAPKGTIFIPY 540 (627)
Q Consensus 524 ----a~~e~~~a~~G~~~~~~ 540 (627)
...+.+++++|+++..+
T Consensus 206 ~s~~p~i~~~~l~~g~~v~~v 226 (330)
T PRK08291 206 PSEEPILKAEWLHPGLHVTAM 226 (330)
T ss_pred CCCCcEecHHHcCCCceEEee
Confidence 22445667788777654
No 184
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=91.97 E-value=0.23 Score=50.71 Aligned_cols=32 Identities=19% Similarity=0.388 Sum_probs=27.1
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
.+.|+++|+++++-||+++|+.|+++|.+|.+
T Consensus 6 ~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~ 37 (261)
T PRK08690 6 GKKILITGMISERSIAYGIAKACREQGAELAF 37 (261)
T ss_pred CcEEEEECCCCCCcHHHHHHHHHHHCCCEEEE
Confidence 35799999853247999999999999999988
No 185
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=91.96 E-value=0.18 Score=53.64 Aligned_cols=42 Identities=17% Similarity=0.241 Sum_probs=34.8
Q ss_pred EEEeccCCChhhHHHHHHHHhccCc-eEEe--cchhhhHHHHhhCch
Q 006894 466 VLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 466 V~l~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~ 509 (627)
|+++||+| +||+.+|+.|++.+. ++.+ +++..+..++.++.+
T Consensus 1 VLVTGa~G--SIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~ 45 (293)
T PF02719_consen 1 VLVTGAGG--SIGSELVRQLLRYGPKKLILFDRDENKLYELERELRS 45 (293)
T ss_dssp EEEETTTS--HHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHH
T ss_pred CEEEcccc--HHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhh
Confidence 78999999 999999999998775 4555 888889999999854
No 186
>PRK07069 short chain dehydrogenase; Validated
Probab=91.95 E-value=0.19 Score=50.04 Aligned_cols=42 Identities=19% Similarity=0.324 Sum_probs=35.3
Q ss_pred EEEeccCCChhhHHHHHHHHhccCceEEe--cc-hhhhHHHHhhCch
Q 006894 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--IC-KDDYEKLKLRIPV 509 (627)
Q Consensus 466 V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~-~~~~~~l~~~~~~ 509 (627)
|+++|++| -||+++|+.|+++|.+|.+ |+ .++.+.+++++..
T Consensus 2 ilVtG~~~--~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~ 46 (251)
T PRK07069 2 AFITGAAG--GLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINA 46 (251)
T ss_pred EEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHh
Confidence 79999998 9999999999999999988 66 6677777766543
No 187
>PRK08219 short chain dehydrogenase; Provisional
Probab=91.94 E-value=0.22 Score=48.79 Aligned_cols=41 Identities=15% Similarity=0.243 Sum_probs=34.5
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
+.|+|+|++| .||+++|+.|+++ .+|.. |+.++.++++++.
T Consensus 4 ~~vlVtG~~g--~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~ 46 (227)
T PRK08219 4 PTALITGASR--GIGAAIARELAPT-HTLLLGGRPAERLDELAAEL 46 (227)
T ss_pred CEEEEecCCc--HHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh
Confidence 5799999999 9999999999988 88877 8877777666543
No 188
>PRK08628 short chain dehydrogenase; Provisional
Probab=91.86 E-value=0.23 Score=49.97 Aligned_cols=42 Identities=14% Similarity=0.189 Sum_probs=34.1
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 506 (627)
..+.++++||+| -||+++|+.|+++|.+|.+ |++++. ++.++
T Consensus 6 ~~~~ilItGasg--giG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~ 49 (258)
T PRK08628 6 KDKVVIVTGGAS--GIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEE 49 (258)
T ss_pred CCCEEEEeCCCC--hHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHH
Confidence 356899999998 9999999999999999888 666655 44333
No 189
>PRK06179 short chain dehydrogenase; Provisional
Probab=91.84 E-value=0.19 Score=50.96 Aligned_cols=35 Identities=20% Similarity=0.242 Sum_probs=30.4
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhh
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY 500 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~ 500 (627)
+.|+++|++| -||+++|+.|+++|.+|++ |+.++.
T Consensus 5 ~~vlVtGasg--~iG~~~a~~l~~~g~~V~~~~r~~~~~ 41 (270)
T PRK06179 5 KVALVTGASS--GIGRATAEKLARAGYRVFGTSRNPARA 41 (270)
T ss_pred CEEEEecCCC--HHHHHHHHHHHHCCCEEEEEeCChhhc
Confidence 5799999998 9999999999999999988 665443
No 190
>CHL00194 ycf39 Ycf39; Provisional
Probab=91.83 E-value=0.22 Score=52.51 Aligned_cols=37 Identities=14% Similarity=0.140 Sum_probs=31.4
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHH
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL 503 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l 503 (627)
+|+|+|||| -||+.+++.|.++|.+|.. |+.++...+
T Consensus 2 kIlVtGatG--~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l 40 (317)
T CHL00194 2 SLLVIGATG--TLGRQIVRQALDEGYQVRCLVRNLRKASFL 40 (317)
T ss_pred EEEEECCCc--HHHHHHHHHHHHCCCeEEEEEcChHHhhhH
Confidence 699999999 9999999999999999886 776654433
No 191
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=91.76 E-value=0.26 Score=50.34 Aligned_cols=44 Identities=18% Similarity=0.234 Sum_probs=35.7
Q ss_pred CcEEEEeccC--CChhhHHHHHHHHhccCceEEe--cc---hhhhHHHHhhCc
Q 006894 463 TAHVLLRGTV--TANKVANAVASSLCQMGIKVAT--IC---KDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gat--g~~kig~ava~~L~~~~~~v~l--~~---~~~~~~l~~~~~ 508 (627)
.+.++++|++ + -||+++|+.|+++|.+|.+ |+ +++++++++++.
T Consensus 7 ~k~~lItGa~~s~--GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~ 57 (257)
T PRK08594 7 GKTYVVMGVANKR--SIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE 57 (257)
T ss_pred CCEEEEECCCCCC--CHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC
Confidence 4678999997 4 7999999999999999998 43 356777777664
No 192
>PRK12747 short chain dehydrogenase; Provisional
Probab=91.75 E-value=0.23 Score=49.95 Aligned_cols=44 Identities=25% Similarity=0.284 Sum_probs=35.4
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe---cchhhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~ 508 (627)
.+.++++|++| -||+++|+.|+++|.+|.+ +++++.+++..++.
T Consensus 4 ~k~~lItGas~--gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~ 50 (252)
T PRK12747 4 GKVALVTGASR--GIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQ 50 (252)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHH
Confidence 36899999998 9999999999999999987 45566666655543
No 193
>PRK12937 short chain dehydrogenase; Provisional
Probab=91.75 E-value=0.25 Score=49.00 Aligned_cols=43 Identities=21% Similarity=0.297 Sum_probs=33.6
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--c-chhhhHHHHhhC
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI 507 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~-~~~~~~~l~~~~ 507 (627)
.+.|+++|++| -||+++|+.|+++|.++++ + ++++.+++.+++
T Consensus 5 ~~~vlItG~~~--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 50 (245)
T PRK12937 5 NKVAIVTGASR--GIGAAIARRLAADGFAVAVNYAGSAAAADELVAEI 50 (245)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHH
Confidence 46899999998 9999999999999999877 3 334455554443
No 194
>PRK07041 short chain dehydrogenase; Provisional
Probab=91.72 E-value=0.2 Score=49.37 Aligned_cols=40 Identities=18% Similarity=0.253 Sum_probs=34.2
Q ss_pred EEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 467 LLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 467 ~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
+++||+| -||+++|+.|+++|.+|++ |+.++.+.+.+++.
T Consensus 1 lItGas~--~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 42 (230)
T PRK07041 1 LVVGGSS--GIGLALARAFAAEGARVTIASRSRDRLAAAARALG 42 (230)
T ss_pred CeecCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence 4789998 9999999999999999988 88788777766553
No 195
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=91.66 E-value=0.25 Score=49.13 Aligned_cols=44 Identities=20% Similarity=0.295 Sum_probs=37.1
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
.+.++++|++| -||+++|+.|+++|.+|.+ |++++.+.+.+++.
T Consensus 5 ~~~~lItG~~g--~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~ 50 (253)
T PRK08217 5 DKVIVITGGAQ--GLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECG 50 (253)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 45799999998 9999999999999999888 87777777766543
No 196
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=91.61 E-value=0.28 Score=52.30 Aligned_cols=44 Identities=16% Similarity=0.089 Sum_probs=34.6
Q ss_pred cCCCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHH
Q 006894 458 SLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL 503 (627)
Q Consensus 458 ~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l 503 (627)
+......+|+|+|++| -||+.+++.|.++|.+|.. |+.++.+.+
T Consensus 5 ~~~~~~~~vLVtG~~G--fIG~~l~~~L~~~G~~V~~~~r~~~~~~~~ 50 (353)
T PLN02896 5 GRESATGTYCVTGATG--YIGSWLVKLLLQRGYTVHATLRDPAKSLHL 50 (353)
T ss_pred ccccCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Confidence 3334566899999999 9999999999999999986 665544433
No 197
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=91.53 E-value=0.31 Score=49.64 Aligned_cols=45 Identities=22% Similarity=0.305 Sum_probs=35.5
Q ss_pred CcEEEEecc--CCChhhHHHHHHHHhccCceEEe--cch--hhhHHHHhhCch
Q 006894 463 TAHVLLRGT--VTANKVANAVASSLCQMGIKVAT--ICK--DDYEKLKLRIPV 509 (627)
Q Consensus 463 ~~~V~l~Ga--tg~~kig~ava~~L~~~~~~v~l--~~~--~~~~~l~~~~~~ 509 (627)
.+.|+++|+ ++ -||+++|+.|+++|.+|.+ |++ +..++++++++.
T Consensus 7 ~k~~lItGa~~s~--GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~ 57 (256)
T PRK07889 7 GKRILVTGVITDS--SIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPE 57 (256)
T ss_pred CCEEEEeCCCCcc--hHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCC
Confidence 357899999 54 8999999999999999998 443 446777766643
No 198
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=91.52 E-value=0.27 Score=53.32 Aligned_cols=139 Identities=18% Similarity=0.200 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeEecCCCcccceeecCChhHHHHH---HhcCCC-CCcEEEEec
Q 006894 395 INSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVV---VNSLPK-TTAHVLLRG 470 (627)
Q Consensus 395 in~~Ie~Ai~~A~~~G~kv~~LG~ln~~e~ln~~g~~~~~r~p~~L~irvv~Gnsltaavv---~~~ip~-~~~~V~l~G 470 (627)
|--+|.+|...|.+.|.-=--|..|=+ + .+.+.|.-. -+.++-.|..=.++++ .+..+. ..++|+|+|
T Consensus 110 IlGQVK~Ay~~A~~~g~~g~~L~~lf~-~------A~~~aKrVR-teT~I~~~~vSv~s~av~~~~~~~~l~~k~vLvIG 181 (338)
T PRK00676 110 IQGQVKRAYLKAARERKLPFALHFLFQ-K------ALKEGKVFR-SKGGAPYAEVTIESVVQQELRRRQKSKKASLLFIG 181 (338)
T ss_pred HHHHHHHHHHHHHHcCCchHHHHHHHH-H------HHHHHHHHh-hhcCCCCCCcCHHHHHHHHHHHhCCccCCEEEEEc
Confidence 666789999999999863222221111 1 112222211 1223333322222222 233332 578999999
Q ss_pred cCCChhhHHHHHHHHhccCc-eEEe--cchhh--hHHHH-hhCchhhcccceecc-chhhcc------HHHhcCCCCcEE
Q 006894 471 TVTANKVANAVASSLCQMGI-KVAT--ICKDD--YEKLK-LRIPVEAQHNLVLST-SYAAHK------TEQARAPKGTIF 537 (627)
Q Consensus 471 atg~~kig~ava~~L~~~~~-~v~l--~~~~~--~~~l~-~~~~~~~~~~lv~~~-~~~~a~------~e~~~a~~G~~~ 537 (627)
| | ++|+.+|++|.++|+ ++++ |+.++ |+.+. +.+.-..+.++|.+. +-.++. ...+..++ -.|
T Consensus 182 a-G--em~~l~a~~L~~~g~~~i~v~nRt~~~~~~~~~~~~~~~~~~~~DvVIs~t~~Tas~~p~i~~~~~~~~~~-r~~ 257 (338)
T PRK00676 182 Y-S--EINRKVAYYLQRQGYSRITFCSRQQLTLPYRTVVREELSFQDPYDVIFFGSSESAYAFPHLSWESLADIPD-RIV 257 (338)
T ss_pred c-c--HHHHHHHHHHHHcCCCEEEEEcCCccccchhhhhhhhhhcccCCCEEEEcCCcCCCCCceeeHHHHhhccC-cEE
Confidence 9 5 999999999999885 4666 55443 55442 223334456766441 111111 22223333 388
Q ss_pred eeCcCCCCc
Q 006894 538 IPYTQIPPR 546 (627)
Q Consensus 538 ~~~sq~P~~ 546 (627)
+|.+ +|+.
T Consensus 258 iDLA-vPRd 265 (338)
T PRK00676 258 FDFN-VPRT 265 (338)
T ss_pred EEec-CCCC
Confidence 8999 8865
No 199
>PRK08303 short chain dehydrogenase; Provisional
Probab=91.47 E-value=0.23 Score=52.47 Aligned_cols=44 Identities=16% Similarity=0.172 Sum_probs=35.4
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cc----------hhhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC----------KDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~----------~~~~~~l~~~~~ 508 (627)
.+.|+++|+++ -||+++|+.|+++|.+|.+ |+ +++.+++.+++.
T Consensus 8 ~k~~lITGgs~--GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~ 63 (305)
T PRK08303 8 GKVALVAGATR--GAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVT 63 (305)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHH
Confidence 46899999997 9999999999999999988 66 345666655543
No 200
>PRK06123 short chain dehydrogenase; Provisional
Probab=91.44 E-value=0.27 Score=48.97 Aligned_cols=42 Identities=19% Similarity=0.213 Sum_probs=33.4
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe---cchhhhHHHHhhC
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~ 507 (627)
+.++++|++| -||+++|+.|+++|.+|.+ +++++.+++.+++
T Consensus 3 ~~~lVtG~~~--~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l 47 (248)
T PRK06123 3 KVMIITGASR--GIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAI 47 (248)
T ss_pred CEEEEECCCc--hHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHH
Confidence 4789999998 9999999999999988877 4455565555444
No 201
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=91.43 E-value=0.29 Score=49.33 Aligned_cols=41 Identities=22% Similarity=0.361 Sum_probs=32.9
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe---cchhhhHHHHh
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKL 505 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~ 505 (627)
.+.++++|++| -||+++|+.|+++|.+|.+ ++++..+++++
T Consensus 7 ~k~~lItGas~--gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~ 50 (255)
T PRK06463 7 GKVALITGGTR--GIGRAIAEAFLREGAKVAVLYNSAENEAKELRE 50 (255)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh
Confidence 46899999998 9999999999999999987 34444555543
No 202
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=91.39 E-value=0.28 Score=50.16 Aligned_cols=45 Identities=18% Similarity=0.295 Sum_probs=33.7
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe-----cchhhhHHHHhhC
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT-----ICKDDYEKLKLRI 507 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l-----~~~~~~~~l~~~~ 507 (627)
.+.|+++|+++++-||+|+|+.|+++|.+|.+ |++++.+++.+++
T Consensus 6 ~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~ 55 (260)
T PRK06997 6 GKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF 55 (260)
T ss_pred CcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhc
Confidence 46899999743237999999999999999987 2345566665554
No 203
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=91.38 E-value=0.27 Score=48.65 Aligned_cols=43 Identities=23% Similarity=0.318 Sum_probs=34.8
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe---cchhhhHHHHhhC
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~ 507 (627)
.+.++++|++| .||+.+|+.|+++|.+|.+ |+.++.+++.+++
T Consensus 5 ~~~ilI~Gasg--~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~ 50 (247)
T PRK05565 5 GKVAIVTGASG--GIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEI 50 (247)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 35799999998 9999999999999999877 5566666555543
No 204
>PRK07985 oxidoreductase; Provisional
Probab=91.38 E-value=0.24 Score=51.70 Aligned_cols=43 Identities=23% Similarity=0.320 Sum_probs=34.0
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cc--hhhhHHHHhhC
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC--KDDYEKLKLRI 507 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~--~~~~~~l~~~~ 507 (627)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+ +++.+++++.+
T Consensus 49 ~k~vlITGas~--gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~ 95 (294)
T PRK07985 49 DRKALVTGGDS--GIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKII 95 (294)
T ss_pred CCEEEEECCCC--cHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHH
Confidence 36899999998 9999999999999999988 33 34455555443
No 205
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=91.37 E-value=0.32 Score=50.23 Aligned_cols=35 Identities=20% Similarity=0.258 Sum_probs=29.1
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cch
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK 497 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~ 497 (627)
.+.++++|+++.+-||+++|+.|+++|.+|.+ |++
T Consensus 7 ~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~ 43 (271)
T PRK06505 7 GKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGE 43 (271)
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCch
Confidence 46789999993126999999999999999998 554
No 206
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=91.36 E-value=0.28 Score=48.98 Aligned_cols=44 Identities=23% Similarity=0.307 Sum_probs=35.6
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe---cchhhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~ 508 (627)
.+.++++|++| -||+++|+.|+++|.+|++ |++++.+++.+++.
T Consensus 6 ~~~~lItG~s~--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~ 52 (247)
T PRK12935 6 GKVAIVTGGAK--GIGKAITVALAQEGAKVVINYNSSKEAAENLVNELG 52 (247)
T ss_pred CCEEEEECCCC--HHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHH
Confidence 46899999998 9999999999999999976 45566666655543
No 207
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=91.25 E-value=0.79 Score=48.89 Aligned_cols=142 Identities=14% Similarity=0.193 Sum_probs=88.0
Q ss_pred hHHHHHHHHHHHHHHHHcCCcE--EEecccccc-------cccccCC---ceeEec-CCCcccc----------eeecC-
Q 006894 392 REAINSLIEEAILEADAKGVKV--ISLGLLNQG-------EELNRNG---EIYLER-QPNKLKI----------KVVDG- 447 (627)
Q Consensus 392 ~~~in~~Ie~Ai~~A~~~G~kv--~~LG~ln~~-------e~ln~~g---~~~~~r-~p~~L~i----------rvv~G- 447 (627)
.++-+.-++...+.|++.|++. +-|..-.+. +++|.|- ++.++. -|.+++. +=|||
T Consensus 42 d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl 121 (293)
T PRK14185 42 DGGSETYVANKVKACEECGFKSSLIRYESDVTEEELLAKVRELNQDDDVDGFIVQLPLPKHISEQKVIEAIDYRKDVDGF 121 (293)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcCCC
Confidence 3445555677788999999998 556544322 4677774 334432 1332331 12333
Q ss_pred -----------Ch----hHHHHHHhcC-----CCCCcEEEEeccCCChhhHHHHHHHHhcc----CceEEe-cc-hhhhH
Q 006894 448 -----------SS----LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-IC-KDDYE 501 (627)
Q Consensus 448 -----------ns----ltaavv~~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~----~~~v~l-~~-~~~~~ 501 (627)
+. -|++.|++=+ +-.-++|+++|... -||+-+|..|.++ +..|++ .+ ...+.
T Consensus 122 ~~~N~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~GK~vvViGrS~--iVGkPla~lL~~~~~~~~aTVtvchs~T~nl~ 199 (293)
T PRK14185 122 HPINVGRMSIGLPCFVSATPNGILELLKRYHIETSGKKCVVLGRSN--IVGKPMAQLMMQKAYPGDCTVTVCHSRSKNLK 199 (293)
T ss_pred CHhhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHcCCCCCCCEEEEecCCCCCHH
Confidence 22 1677766544 44678999999998 9999999999987 688988 22 22222
Q ss_pred HHHhhCchhhcccceeccchhhccHHHhcCCCCcEEeeCc
Q 006894 502 KLKLRIPVEAQHNLVLSTSYAAHKTEQARAPKGTIFIPYT 541 (627)
Q Consensus 502 ~l~~~~~~~~~~~lv~~~~~~~a~~e~~~a~~G~~~~~~s 541 (627)
+. -++.++|-+.--.......++.++|++++|+.
T Consensus 200 ~~------~~~ADIvIsAvGkp~~i~~~~vk~gavVIDvG 233 (293)
T PRK14185 200 KE------CLEADIIIAALGQPEFVKADMVKEGAVVIDVG 233 (293)
T ss_pred HH------HhhCCEEEEccCCcCccCHHHcCCCCEEEEec
Confidence 21 12334432222222236679999999999998
No 208
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=91.23 E-value=0.44 Score=52.17 Aligned_cols=82 Identities=18% Similarity=0.284 Sum_probs=53.0
Q ss_pred hcCCCCCcEEEEeccCCChhhHHHHHHHHhccCceEEecchhhhHHHHhhCchhhcccce-eccchh---hccHHHhcCC
Q 006894 457 NSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVEAQHNLV-LSTSYA---AHKTEQARAP 532 (627)
Q Consensus 457 ~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~~~~~lv-~~~~~~---~a~~e~~~a~ 532 (627)
+.+++...+|.++|++| .+|..+|+.|.+.|..|.+.+.+..++..+.+ .+.++| ..+... +...+-..++
T Consensus 92 ~~~~~~~~~I~IiGG~G--lmG~slA~~l~~~G~~V~~~d~~~~~~~~~~~---~~aDlVilavP~~~~~~~~~~l~~l~ 166 (374)
T PRK11199 92 KTLNPDLRPVVIVGGKG--QLGRLFAKMLTLSGYQVRILEQDDWDRAEDIL---ADAGMVIVSVPIHLTEEVIARLPPLP 166 (374)
T ss_pred cccCcccceEEEEcCCC--hhhHHHHHHHHHCCCeEEEeCCCcchhHHHHH---hcCCEEEEeCcHHHHHHHHHHHhCCC
Confidence 33444667899999999 99999999999999999983333333222111 223455 333222 1223333489
Q ss_pred CCcEEeeCcCC
Q 006894 533 KGTIFIPYTQI 543 (627)
Q Consensus 533 ~G~~~~~~sq~ 543 (627)
+|++++|++-+
T Consensus 167 ~~~iv~Dv~Sv 177 (374)
T PRK11199 167 EDCILVDLTSV 177 (374)
T ss_pred CCcEEEECCCc
Confidence 99999999854
No 209
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=91.20 E-value=0.29 Score=49.47 Aligned_cols=43 Identities=19% Similarity=0.195 Sum_probs=34.3
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--c-chhhhHHHHhhC
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI 507 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~-~~~~~~~l~~~~ 507 (627)
.+.|+++|++| -||+++|+.|+++|.++.+ | +++..+++.+++
T Consensus 7 ~k~~lItGa~~--gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l 52 (261)
T PRK08936 7 GKVVVITGGST--GLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEI 52 (261)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence 46899999998 9999999999999999887 4 344555555544
No 210
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=91.11 E-value=0.19 Score=51.78 Aligned_cols=33 Identities=21% Similarity=0.258 Sum_probs=28.9
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe--cchhh
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~ 499 (627)
.|+|+|||| .||+.+++.|.++|.+|.. |+.++
T Consensus 1 ~ilVtGatG--~iG~~vv~~L~~~g~~V~~~~R~~~~ 35 (285)
T TIGR03649 1 TILLTGGTG--KTASRIARLLQAASVPFLVASRSSSS 35 (285)
T ss_pred CEEEEcCCC--hHHHHHHHHHHhCCCcEEEEeCCCcc
Confidence 389999999 9999999999999988887 77653
No 211
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=91.02 E-value=0.3 Score=49.24 Aligned_cols=42 Identities=14% Similarity=0.192 Sum_probs=33.3
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++ ..+++.+++
T Consensus 8 ~k~vlVtGas~--gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~ 51 (260)
T PRK12823 8 GKVVVVTGAAQ--GIGRGVALRAAAEGARVVLVDRSE-LVHEVAAEL 51 (260)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHH
Confidence 46899999998 9999999999999999988 553 344444443
No 212
>PRK09134 short chain dehydrogenase; Provisional
Probab=90.91 E-value=0.38 Score=48.62 Aligned_cols=44 Identities=27% Similarity=0.437 Sum_probs=34.9
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe---cchhhhHHHHhhC
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~ 507 (627)
..+.|+++|++| -||+.+|+.|+++|.+|.+ ++.++.+++.+++
T Consensus 8 ~~k~vlItGas~--giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 54 (258)
T PRK09134 8 APRAALVTGAAR--RIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEI 54 (258)
T ss_pred CCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence 345899999998 9999999999999999876 3455666665553
No 213
>PRK06484 short chain dehydrogenase; Validated
Probab=90.90 E-value=0.39 Score=53.91 Aligned_cols=45 Identities=13% Similarity=0.147 Sum_probs=39.4
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 509 (627)
.+.|+++|+++ -||+++|+.|+++|.+|.+ |+.++++++.+++..
T Consensus 5 ~k~~lITGas~--gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 51 (520)
T PRK06484 5 SRVVLVTGAAG--GIGRAACQRFARAGDQVVVADRNVERARERADSLGP 51 (520)
T ss_pred CeEEEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCC
Confidence 46889999997 9999999999999999988 888888888777643
No 214
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=90.86 E-value=0.32 Score=48.23 Aligned_cols=42 Identities=26% Similarity=0.196 Sum_probs=34.2
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe---cchhhhHHHHhhC
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRI 507 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~ 507 (627)
+.|+++|++| -||+++++.|+++|.+|.+ |+.++.+++.+++
T Consensus 2 ~~~lItGa~g--~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~ 46 (247)
T PRK09730 2 AIALVTGGSR--GIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLI 46 (247)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHH
Confidence 4789999998 9999999999999999865 6666666555543
No 215
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=90.86 E-value=0.31 Score=51.09 Aligned_cols=36 Identities=19% Similarity=0.126 Sum_probs=30.9
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhH
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE 501 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~ 501 (627)
+.|+|+|+|| -||+++++.|.++|.+|.. |+.++.+
T Consensus 6 ~~vlVTGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 43 (322)
T PLN02986 6 KLVCVTGASG--YIASWIVKLLLLRGYTVKATVRDLTDRK 43 (322)
T ss_pred CEEEEECCCc--HHHHHHHHHHHHCCCEEEEEECCCcchH
Confidence 6899999999 9999999999999999975 6665433
No 216
>PRK07806 short chain dehydrogenase; Provisional
Probab=90.77 E-value=0.34 Score=48.38 Aligned_cols=43 Identities=21% Similarity=0.224 Sum_probs=34.2
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cch-hhhHHHHhhC
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI 507 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~-~~~~~l~~~~ 507 (627)
.+.|+++|++| -||+++|+.|.++|.+|.+ |+. ++.+++.+++
T Consensus 6 ~k~vlItGasg--giG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l 51 (248)
T PRK07806 6 GKTALVTGSSR--GIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEI 51 (248)
T ss_pred CcEEEEECCCC--cHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHH
Confidence 36799999998 9999999999999999877 654 3455555444
No 217
>PRK06720 hypothetical protein; Provisional
Probab=90.74 E-value=0.4 Score=46.70 Aligned_cols=44 Identities=18% Similarity=0.168 Sum_probs=36.3
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
..+.++++|+++ -||+++|+.|+++|.+|.+ |+.++.++..+++
T Consensus 15 ~gk~~lVTGa~~--GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l 60 (169)
T PRK06720 15 AGKVAIVTGGGI--GIGRNTALLLAKQGAKVIVTDIDQESGQATVEEI 60 (169)
T ss_pred CCCEEEEecCCC--hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 356889999997 9999999999999999988 6666666665554
No 218
>PRK06483 dihydromonapterin reductase; Provisional
Probab=90.73 E-value=0.39 Score=47.75 Aligned_cols=35 Identities=23% Similarity=0.226 Sum_probs=30.5
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhh
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~ 499 (627)
.+.|+++|++| -||+++|+.|+++|.+|++ |++++
T Consensus 2 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~ 38 (236)
T PRK06483 2 PAPILITGAGQ--RIGLALAWHLLAQGQPVIVSYRTHYP 38 (236)
T ss_pred CceEEEECCCC--hHHHHHHHHHHHCCCeEEEEeCCchh
Confidence 35799999998 9999999999999999988 66544
No 219
>PRK07577 short chain dehydrogenase; Provisional
Probab=90.55 E-value=0.29 Score=48.30 Aligned_cols=33 Identities=21% Similarity=0.272 Sum_probs=29.4
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchh
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 498 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~ 498 (627)
+.|+++|++| .||+++|+.|+++|.+|.+ |+.+
T Consensus 4 k~vlItG~s~--~iG~~ia~~l~~~G~~v~~~~r~~~ 38 (234)
T PRK07577 4 RTVLVTGATK--GIGLALSLRLANLGHQVIGIARSAI 38 (234)
T ss_pred CEEEEECCCC--cHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 5799999998 9999999999999999988 5544
No 220
>PRK07856 short chain dehydrogenase; Provisional
Probab=90.54 E-value=0.3 Score=49.13 Aligned_cols=35 Identities=17% Similarity=0.246 Sum_probs=30.8
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhh
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~ 499 (627)
.+.++++|++| -||+++|+.|+++|.+|.+ |+.++
T Consensus 6 ~k~~lItGas~--gIG~~la~~l~~~g~~v~~~~r~~~~ 42 (252)
T PRK07856 6 GRVVLVTGGTR--GIGAGIARAFLAAGATVVVCGRRAPE 42 (252)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 47899999998 9999999999999999988 65543
No 221
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=90.54 E-value=0.31 Score=51.70 Aligned_cols=141 Identities=18% Similarity=0.190 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHHHHHcCCcE--EEec-------ccccccccccCC---ceeEec-CCCcccc----------eeecCC-
Q 006894 393 EAINSLIEEAILEADAKGVKV--ISLG-------LLNQGEELNRNG---EIYLER-QPNKLKI----------KVVDGS- 448 (627)
Q Consensus 393 ~~in~~Ie~Ai~~A~~~G~kv--~~LG-------~ln~~e~ln~~g---~~~~~r-~p~~L~i----------rvv~Gn- 448 (627)
.+-+.-++.-++.|++.|++. +-|- .++..+++|.|- ++.++. -|++++. +=|||=
T Consensus 45 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~ 124 (285)
T PRK10792 45 PASQVYVASKRKACEEVGFVSRSYDLPETTSEAELLALIDELNADPTIDGILVQLPLPAHIDNVKVLERIHPDKDVDGFH 124 (285)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccCccC
Confidence 344555666777888888884 4443 222336677763 333331 1222320 223333
Q ss_pred ---------------hhHHHHHHhcC-----CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh
Q 006894 449 ---------------SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (627)
Q Consensus 449 ---------------sltaavv~~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 506 (627)
.-|++.|++-+ +-.-++|+++|... -||+-+|..|.++|..|++ +..+. |++.
T Consensus 125 ~~n~g~l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~--iVG~Pla~lL~~~~atVtv~hs~T~~---l~~~ 199 (285)
T PRK10792 125 PYNVGRLAQRIPLLRPCTPRGIMTLLERYGIDTYGLNAVVVGASN--IVGRPMSLELLLAGCTVTVCHRFTKN---LRHH 199 (285)
T ss_pred hhhHhHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCc--ccHHHHHHHHHHCCCeEEEEECCCCC---HHHH
Confidence 23666666655 33578999999997 8999999999999999999 32222 2221
Q ss_pred CchhhcccceeccchhhccHHHhcCCCCcEEeeCc
Q 006894 507 IPVEAQHNLVLSTSYAAHKTEQARAPKGTIFIPYT 541 (627)
Q Consensus 507 ~~~~~~~~lv~~~~~~~a~~e~~~a~~G~~~~~~s 541 (627)
+ ++.++|.++--.......++.++|++++|+.
T Consensus 200 ~---~~ADIvi~avG~p~~v~~~~vk~gavVIDvG 231 (285)
T PRK10792 200 V---RNADLLVVAVGKPGFIPGEWIKPGAIVIDVG 231 (285)
T ss_pred H---hhCCEEEEcCCCcccccHHHcCCCcEEEEcc
Confidence 1 3334443333223345679999999999998
No 222
>PRK12827 short chain dehydrogenase; Provisional
Probab=90.50 E-value=0.39 Score=47.61 Aligned_cols=43 Identities=21% Similarity=0.291 Sum_probs=34.1
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe------cchhhhHHHHhhC
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT------ICKDDYEKLKLRI 507 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l------~~~~~~~~l~~~~ 507 (627)
.+.++++|++| -||+++|+.|+++|.+|.+ ++++..+++.+++
T Consensus 6 ~~~ilItGasg--~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~ 54 (249)
T PRK12827 6 SRRVLITGGSG--GLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGI 54 (249)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHH
Confidence 36799999998 9999999999999999877 3445555555554
No 223
>PLN02650 dihydroflavonol-4-reductase
Probab=90.44 E-value=0.34 Score=51.56 Aligned_cols=40 Identities=15% Similarity=0.160 Sum_probs=32.9
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHH
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL 503 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l 503 (627)
..++|+|+|++| -||+.+++.|.++|.+|.. |+.++.+++
T Consensus 4 ~~k~iLVTGatG--fIGs~l~~~L~~~G~~V~~~~r~~~~~~~~ 45 (351)
T PLN02650 4 QKETVCVTGASG--FIGSWLVMRLLERGYTVRATVRDPANVKKV 45 (351)
T ss_pred CCCEEEEeCCcH--HHHHHHHHHHHHCCCEEEEEEcCcchhHHH
Confidence 356899999999 9999999999999999976 665554443
No 224
>PRK06114 short chain dehydrogenase; Provisional
Probab=90.39 E-value=0.4 Score=48.41 Aligned_cols=44 Identities=20% Similarity=0.279 Sum_probs=34.7
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cch-hhhHHHHhhC
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI 507 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~-~~~~~l~~~~ 507 (627)
..+.++++|++| -||+++|+.|+++|.+|.+ |+. +..+++.+++
T Consensus 7 ~~k~~lVtG~s~--gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l 53 (254)
T PRK06114 7 DGQVAFVTGAGS--GIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHI 53 (254)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHH
Confidence 346899999998 9999999999999999998 544 3455555444
No 225
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=90.39 E-value=0.34 Score=49.04 Aligned_cols=31 Identities=16% Similarity=0.298 Sum_probs=28.4
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
..+.|+++|+++ -||+++|+.|+++|.+|.+
T Consensus 7 ~~k~~lItGas~--gIG~aia~~l~~~G~~vv~ 37 (251)
T PRK12481 7 NGKVAIITGCNT--GLGQGMAIGLAKAGADIVG 37 (251)
T ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHCCCEEEE
Confidence 346899999997 9999999999999999998
No 226
>PRK06198 short chain dehydrogenase; Provisional
Probab=90.33 E-value=0.38 Score=48.40 Aligned_cols=43 Identities=14% Similarity=0.191 Sum_probs=35.0
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCce-EEe--cchhhhHHHHhhC
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~-v~l--~~~~~~~~l~~~~ 507 (627)
.+.|+++|++| -||+.+|+.|+++|.+ |.+ |+.++.+.+.+++
T Consensus 6 ~k~vlItGa~g--~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l 51 (260)
T PRK06198 6 GKVALVTGGTQ--GLGAAIARAFAERGAAGLVICGRNAEKGEAQAAEL 51 (260)
T ss_pred CcEEEEeCCCc--hHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHH
Confidence 46799999998 9999999999999998 777 7766666555443
No 227
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=90.27 E-value=0.68 Score=44.42 Aligned_cols=94 Identities=23% Similarity=0.277 Sum_probs=60.5
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch------h--hccccee--ccchhhc---cHH-
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV------E--AQHNLVL--STSYAAH---KTE- 527 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~------~--~~~~lv~--~~~~~~a---~~e- 527 (627)
++|.++|- | ..|+++|+.|.+.|.+|.. |++++.++++++-.. + .+.++|. +.+.++. ..+
T Consensus 2 ~~Ig~IGl-G--~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~ 78 (163)
T PF03446_consen 2 MKIGFIGL-G--NMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGE 78 (163)
T ss_dssp BEEEEE---S--HHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCT
T ss_pred CEEEEEch-H--HHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhh
Confidence 47889998 4 9999999999999999999 889999999866211 1 2223332 2232221 122
Q ss_pred --HhcCCCCcEEeeCcCCCCc-------CCC-CCeeEeccCcc
Q 006894 528 --QARAPKGTIFIPYTQIPPR-------KLR-KDCFYHSTPAM 560 (627)
Q Consensus 528 --~~~a~~G~~~~~~sq~P~~-------~~R-~dc~~~~~p~~ 560 (627)
-..+++|++|+|.|-..|. .++ +.+.|.+-|..
T Consensus 79 ~i~~~l~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~vdapV~ 121 (163)
T PF03446_consen 79 NILAGLRPGKIIIDMSTISPETSRELAERLAAKGVRYVDAPVS 121 (163)
T ss_dssp THGGGS-TTEEEEE-SS--HHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred HHhhccccceEEEecCCcchhhhhhhhhhhhhccceeeeeeee
Confidence 4668999999999975543 333 67888877766
No 228
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=90.27 E-value=0.42 Score=50.14 Aligned_cols=45 Identities=20% Similarity=0.279 Sum_probs=38.6
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
..+.++++|++. -||+|+|+.|++.|.+|.+ |++++.++.+.++.
T Consensus 7 ~gkvalVTG~s~--GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~ 53 (270)
T KOG0725|consen 7 AGKVALVTGGSS--GIGKAIALLLAKAGAKVVITGRSEERLEETAQELG 53 (270)
T ss_pred CCcEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 346788999996 9999999999999999999 99998888776633
No 229
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=90.27 E-value=0.39 Score=48.10 Aligned_cols=29 Identities=21% Similarity=0.335 Sum_probs=27.1
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
+.|+++|++| -||+++|+.|+++|.+|.+
T Consensus 3 k~vlItG~sg--~iG~~la~~L~~~g~~vi~ 31 (256)
T PRK12745 3 PVALVTGGRR--GIGLGIARALAAAGFDLAI 31 (256)
T ss_pred cEEEEeCCCc--hHHHHHHHHHHHCCCEEEE
Confidence 5799999998 9999999999999999888
No 230
>PLN02686 cinnamoyl-CoA reductase
Probab=90.19 E-value=0.44 Score=51.65 Aligned_cols=41 Identities=27% Similarity=0.307 Sum_probs=34.1
Q ss_pred CCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHH
Q 006894 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL 503 (627)
Q Consensus 461 ~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l 503 (627)
...+.|+|+|++| -||+++|+.|.++|.+|.+ |+.++.+++
T Consensus 51 ~~~k~VLVTGatG--fIG~~lv~~L~~~G~~V~~~~r~~~~~~~l 93 (367)
T PLN02686 51 AEARLVCVTGGVS--FLGLAIVDRLLRHGYSVRIAVDTQEDKEKL 93 (367)
T ss_pred CCCCEEEEECCch--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 3467899999999 9999999999999999875 766655554
No 231
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=90.08 E-value=0.44 Score=48.31 Aligned_cols=37 Identities=19% Similarity=0.256 Sum_probs=30.4
Q ss_pred CcEEEEeccC--CChhhHHHHHHHHhccCceEEe--cchhhhHH
Q 006894 463 TAHVLLRGTV--TANKVANAVASSLCQMGIKVAT--ICKDDYEK 502 (627)
Q Consensus 463 ~~~V~l~Gat--g~~kig~ava~~L~~~~~~v~l--~~~~~~~~ 502 (627)
.+.|+++|++ + -||+++|+.|+++|.+|.+ |+ ++.++
T Consensus 7 ~k~~lItGas~~~--gIG~a~a~~la~~G~~Vi~~~r~-~~~~~ 47 (252)
T PRK06079 7 GKKIVVMGVANKR--SIAWGCAQAIKDQGATVIYTYQN-DRMKK 47 (252)
T ss_pred CCEEEEeCCCCCC--chHHHHHHHHHHCCCEEEEecCc-hHHHH
Confidence 3678999998 5 7999999999999999998 65 34333
No 232
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=90.07 E-value=0.32 Score=48.22 Aligned_cols=40 Identities=25% Similarity=0.390 Sum_probs=31.6
Q ss_pred EEEeccCCChhhHHHHHHHHhccCceEEe--c-chhhhHHHHhhC
Q 006894 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI 507 (627)
Q Consensus 466 V~l~Gatg~~kig~ava~~L~~~~~~v~l--~-~~~~~~~l~~~~ 507 (627)
|+++|++| -||+++|+.|+++|.+|.+ | +.++.+.+.+++
T Consensus 1 vlItGas~--giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l 43 (239)
T TIGR01831 1 VLVTGASR--GIGRAIANRLAADGFEICVHYHSGRSDAESVVSAI 43 (239)
T ss_pred CEEeCCCc--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH
Confidence 58999998 9999999999999999877 3 345555555544
No 233
>PLN00198 anthocyanidin reductase; Provisional
Probab=90.06 E-value=0.43 Score=50.46 Aligned_cols=40 Identities=20% Similarity=0.157 Sum_probs=32.9
Q ss_pred CCCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhh
Q 006894 459 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY 500 (627)
Q Consensus 459 ip~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~ 500 (627)
.|...++|+++|++| -||+.+|+.|.++|.+|.. |+.++.
T Consensus 5 ~~~~~~~vlItG~~G--fIG~~l~~~L~~~g~~V~~~~r~~~~~ 46 (338)
T PLN00198 5 TPTGKKTACVIGGTG--FLASLLIKLLLQKGYAVNTTVRDPENQ 46 (338)
T ss_pred cCCCCCeEEEECCch--HHHHHHHHHHHHCCCEEEEEECCCCCH
Confidence 366678899999999 9999999999999999854 555443
No 234
>PRK05855 short chain dehydrogenase; Validated
Probab=90.06 E-value=0.39 Score=53.87 Aligned_cols=44 Identities=18% Similarity=0.214 Sum_probs=38.3
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
...++++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++.
T Consensus 315 ~~~~lv~G~s~--giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 360 (582)
T PRK05855 315 GKLVVVTGAGS--GIGRETALAFAREGAEVVASDIDEAAAERTAELIR 360 (582)
T ss_pred CCEEEEECCcC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 46789999998 9999999999999999988 88888888776653
No 235
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=90.05 E-value=0.42 Score=47.75 Aligned_cols=38 Identities=21% Similarity=0.326 Sum_probs=31.2
Q ss_pred EEEeccCCChhhHHHHHHHHhccCceEEe--cch--hhhHHHHh
Q 006894 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICK--DDYEKLKL 505 (627)
Q Consensus 466 V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~--~~~~~l~~ 505 (627)
|+|+|||| ++|+.|+++|.+++.+|.. |+. ++.++++.
T Consensus 1 I~V~GatG--~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~ 42 (233)
T PF05368_consen 1 ILVTGATG--NQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQA 42 (233)
T ss_dssp EEEETTTS--HHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHH
T ss_pred CEEECCcc--HHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhc
Confidence 78999999 9999999999998888877 664 34666654
No 236
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=90.05 E-value=0.36 Score=48.80 Aligned_cols=32 Identities=16% Similarity=0.229 Sum_probs=28.7
Q ss_pred CCCcEEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 461 ~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
...+.++++|++| -||+++|+.|+++|.+|.+
T Consensus 8 l~~k~~lItG~~~--gIG~a~a~~l~~~G~~vv~ 39 (253)
T PRK08993 8 LEGKVAVVTGCDT--GLGQGMALGLAEAGCDIVG 39 (253)
T ss_pred CCCCEEEEECCCc--hHHHHHHHHHHHCCCEEEE
Confidence 3446899999998 9999999999999999987
No 237
>PRK07023 short chain dehydrogenase; Provisional
Probab=90.02 E-value=0.33 Score=48.52 Aligned_cols=33 Identities=24% Similarity=0.336 Sum_probs=29.2
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchh
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 498 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~ 498 (627)
..|+++|++| -||+++|+.|+++|.+|++ |+.+
T Consensus 2 ~~vlItGasg--giG~~ia~~l~~~G~~v~~~~r~~~ 36 (243)
T PRK07023 2 VRAIVTGHSR--GLGAALAEQLLQPGIAVLGVARSRH 36 (243)
T ss_pred ceEEEecCCc--chHHHHHHHHHhCCCEEEEEecCcc
Confidence 3689999998 9999999999999999988 6554
No 238
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=89.98 E-value=0.49 Score=48.85 Aligned_cols=46 Identities=20% Similarity=0.195 Sum_probs=34.4
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cc---hhhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC---KDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~---~~~~~~l~~~~~ 508 (627)
.+.|+++|+++.+-||+++|+.|+++|.+|.+ |+ .++.+++++++.
T Consensus 10 ~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~ 60 (272)
T PRK08159 10 GKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELG 60 (272)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcC
Confidence 36789999972127999999999999999988 54 245666665553
No 239
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=89.97 E-value=0.35 Score=51.39 Aligned_cols=141 Identities=21% Similarity=0.216 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeEec-CCCcccc----------eeecCCh
Q 006894 393 EAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLER-QPNKLKI----------KVVDGSS 449 (627)
Q Consensus 393 ~~in~~Ie~Ai~~A~~~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~r-~p~~L~i----------rvv~Gns 449 (627)
++-+.-+..-++.|++.|+++.- |- .++..++||.|. ++.+.. -|++++. +=|||=+
T Consensus 41 ~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~ 120 (287)
T PRK14173 41 PASVSYVRLKDRQAKALGLRSQVEVLPESTSQEELLELIARLNADPEVDGILVQLPLPPHIDFQRVLEAIDPLKDVDGFH 120 (287)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCccccccccC
Confidence 34445566677788999987654 33 233336677764 334432 1222331 2244433
Q ss_pred ----------------hHHHHHHhcC-----CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh
Q 006894 450 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (627)
Q Consensus 450 ----------------ltaavv~~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 506 (627)
-|+..|++=+ +-.-++|+++|.+. -||+-+|..|.++|..|++ +....+++ .
T Consensus 121 ~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~aTVtichs~T~~l~~---~ 195 (287)
T PRK14173 121 PLNVGRLWMGGEALEPCTPAGVVRLLKHYGIPLAGKEVVVVGRSN--IVGKPLAALLLREDATVTLAHSKTQDLPA---V 195 (287)
T ss_pred hhhhHHHhcCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCC--ccHHHHHHHHHHCCCEEEEeCCCCCCHHH---H
Confidence 3566666544 34578999999998 9999999999999999998 22222221 1
Q ss_pred CchhhcccceeccchhhccHHHhcCCCCcEEeeCc
Q 006894 507 IPVEAQHNLVLSTSYAAHKTEQARAPKGTIFIPYT 541 (627)
Q Consensus 507 ~~~~~~~~lv~~~~~~~a~~e~~~a~~G~~~~~~s 541 (627)
-++.++|-+.--.+.....++.++|+++||+.
T Consensus 196 ---~~~ADIvIsAvGkp~~i~~~~vk~GavVIDVG 227 (287)
T PRK14173 196 ---TRRADVLVVAVGRPHLITPEMVRPGAVVVDVG 227 (287)
T ss_pred ---HhhCCEEEEecCCcCccCHHHcCCCCEEEEcc
Confidence 12334443322222336788999999999998
No 240
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=89.90 E-value=0.65 Score=49.48 Aligned_cols=37 Identities=16% Similarity=0.142 Sum_probs=31.1
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHH
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 502 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~ 502 (627)
++|+++|++| =||+++|+.|+++|.+|+. |+++...+
T Consensus 5 k~ilItGatG--~IG~~l~~~L~~~G~~V~~~~r~~~~~~~ 43 (349)
T TIGR02622 5 KKVLVTGHTG--FKGSWLSLWLLELGAEVYGYSLDPPTSPN 43 (349)
T ss_pred CEEEEECCCC--hhHHHHHHHHHHCCCEEEEEeCCCccchh
Confidence 5799999999 9999999999999999987 55554333
No 241
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=89.84 E-value=0.5 Score=49.67 Aligned_cols=44 Identities=18% Similarity=0.247 Sum_probs=34.6
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--c-chhhhHHHHhhC
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLRI 507 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~-~~~~~~~l~~~~ 507 (627)
+.+.++++|++| -||+++|+.|+++|.+|.+ + +.++.+++.+++
T Consensus 11 ~~k~~lVTGas~--gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i 57 (306)
T PRK07792 11 SGKVAVVTGAAA--GLGRAEALGLARLGATVVVNDVASALDASDVLDEI 57 (306)
T ss_pred CCCEEEEECCCC--hHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHH
Confidence 456899999998 9999999999999999998 3 334555555544
No 242
>PRK06128 oxidoreductase; Provisional
Probab=89.79 E-value=0.4 Score=49.99 Aligned_cols=30 Identities=20% Similarity=0.344 Sum_probs=28.0
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
.+.|+++|++| -||+++|+.|+++|.+|.+
T Consensus 55 ~k~vlITGas~--gIG~~~a~~l~~~G~~V~i 84 (300)
T PRK06128 55 GRKALITGADS--GIGRATAIAFAREGADIAL 84 (300)
T ss_pred CCEEEEecCCC--cHHHHHHHHHHHcCCEEEE
Confidence 46899999998 9999999999999999988
No 243
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=89.78 E-value=0.49 Score=49.00 Aligned_cols=46 Identities=15% Similarity=0.247 Sum_probs=34.3
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cch---hhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---DDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~---~~~~~l~~~~~ 508 (627)
.+.|+++|+++.+-||+++|+.|+++|.+|.+ |++ ++.+++.+++.
T Consensus 5 ~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~ 55 (274)
T PRK08415 5 GKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELG 55 (274)
T ss_pred CcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC
Confidence 36889999971137999999999999999998 664 34555555543
No 244
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=89.66 E-value=0.58 Score=47.64 Aligned_cols=46 Identities=17% Similarity=0.252 Sum_probs=33.7
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhh---hHHHHhhC
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD---YEKLKLRI 507 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~---~~~l~~~~ 507 (627)
..+.|+++|+++.+-||+++|+.|+++|.+|.+ |+++. .+++++++
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~ 59 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEEL 59 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhh
Confidence 346899999982016999999999999999988 66433 44554444
No 245
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=89.65 E-value=0.52 Score=46.99 Aligned_cols=30 Identities=17% Similarity=0.320 Sum_probs=27.5
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
.+.|+++|++| -||+++|+.|+++|.+|.+
T Consensus 3 ~k~~lVtG~s~--giG~~~a~~l~~~G~~vv~ 32 (246)
T PRK12938 3 QRIAYVTGGMG--GIGTSICQRLHKDGFKVVA 32 (246)
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHcCCEEEE
Confidence 36789999998 9999999999999999887
No 246
>PRK07201 short chain dehydrogenase; Provisional
Probab=89.62 E-value=0.44 Score=55.06 Aligned_cols=43 Identities=21% Similarity=0.278 Sum_probs=38.1
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++++.+++.+++
T Consensus 371 ~k~vlItGas~--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 415 (657)
T PRK07201 371 GKVVLITGASS--GIGRATAIKVAEAGATVFLVARNGEALDELVAEI 415 (657)
T ss_pred CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 46899999998 9999999999999999998 8888888877664
No 247
>PRK06523 short chain dehydrogenase; Provisional
Probab=89.62 E-value=0.38 Score=48.43 Aligned_cols=34 Identities=21% Similarity=0.332 Sum_probs=29.9
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchh
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 498 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~ 498 (627)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+++
T Consensus 9 ~k~vlItGas~--gIG~~ia~~l~~~G~~v~~~~r~~~ 44 (260)
T PRK06523 9 GKRALVTGGTK--GIGAATVARLLEAGARVVTTARSRP 44 (260)
T ss_pred CCEEEEECCCC--chhHHHHHHHHHCCCEEEEEeCChh
Confidence 46899999998 9999999999999999988 5543
No 248
>PRK08226 short chain dehydrogenase; Provisional
Probab=89.49 E-value=0.59 Score=47.15 Aligned_cols=34 Identities=15% Similarity=0.367 Sum_probs=30.0
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchh
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 498 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~ 498 (627)
.+.++++|++| -||+++|+.|+++|.+|.+ |+++
T Consensus 6 ~~~~lItG~s~--giG~~la~~l~~~G~~Vv~~~r~~~ 41 (263)
T PRK08226 6 GKTALITGALQ--GIGEGIARVFARHGANLILLDISPE 41 (263)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEecCCHH
Confidence 46899999998 9999999999999999998 5543
No 249
>PLN02583 cinnamoyl-CoA reductase
Probab=89.49 E-value=0.63 Score=48.63 Aligned_cols=33 Identities=15% Similarity=0.057 Sum_probs=29.5
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cc
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC 496 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~ 496 (627)
..+.|+|+|+|| -||+++++.|.++|.+|.. |+
T Consensus 5 ~~k~vlVTGatG--~IG~~lv~~Ll~~G~~V~~~~R~ 39 (297)
T PLN02583 5 SSKSVCVMDASG--YVGFWLVKRLLSRGYTVHAAVQK 39 (297)
T ss_pred CCCEEEEECCCC--HHHHHHHHHHHhCCCEEEEEEcC
Confidence 356899999999 9999999999999999986 64
No 250
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=89.47 E-value=0.61 Score=49.47 Aligned_cols=96 Identities=15% Similarity=0.169 Sum_probs=63.3
Q ss_pred hHHHHHHhcC-----CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe-cc-hhhhHHHHhhCchhhcccceeccchh
Q 006894 450 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-IC-KDDYEKLKLRIPVEAQHNLVLSTSYA 522 (627)
Q Consensus 450 ltaavv~~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l-~~-~~~~~~l~~~~~~~~~~~lv~~~~~~ 522 (627)
-|+..|++=+ +-.-++|+++|.+. -||+-+|.+|.++|..|++ .+ .+.+.+ . -++.++|-+.--.
T Consensus 140 cTp~aii~lL~~y~i~l~Gk~vvViGrS~--~VGkPla~lL~~~~ATVt~chs~T~dl~~---~---~k~ADIvIsAvGk 211 (282)
T PRK14180 140 CTPKGIMTMLREYGIKTEGAYAVVVGASN--VVGKPVSQLLLNAKATVTTCHRFTTDLKS---H---TTKADILIVAVGK 211 (282)
T ss_pred CCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEEcCCCCCHHH---H---hhhcCEEEEccCC
Confidence 4566665433 44688999999998 9999999999999999999 22 222222 1 2334443332222
Q ss_pred hccHHHhcCCCCcEEeeCcCCCC-c-CCCCCeeE
Q 006894 523 AHKTEQARAPKGTIFIPYTQIPP-R-KLRKDCFY 554 (627)
Q Consensus 523 ~a~~e~~~a~~G~~~~~~sq~P~-~-~~R~dc~~ 554 (627)
+.....++.++|++++|+. .-. . ++..|+-+
T Consensus 212 p~~i~~~~vk~gavVIDvG-in~~~gkl~GDvd~ 244 (282)
T PRK14180 212 PNFITADMVKEGAVVIDVG-INHVDGKIVGDVDF 244 (282)
T ss_pred cCcCCHHHcCCCcEEEEec-ccccCCceeCCcCH
Confidence 2236678999999999997 332 1 45566654
No 251
>PRK07791 short chain dehydrogenase; Provisional
Probab=89.39 E-value=0.52 Score=48.97 Aligned_cols=44 Identities=18% Similarity=0.169 Sum_probs=35.9
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cch---------hhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK---------DDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~---------~~~~~l~~~~~ 508 (627)
.+.++++|+++ -||+++|+.|+++|.+|.+ ++. ++.+++.+++.
T Consensus 6 ~k~~lITGas~--GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~ 60 (286)
T PRK07791 6 GRVVIVTGAGG--GIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIV 60 (286)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHH
Confidence 46899999997 9999999999999999988 544 66666666653
No 252
>PLN02778 3,5-epimerase/4-reductase
Probab=89.30 E-value=0.56 Score=49.35 Aligned_cols=49 Identities=16% Similarity=0.160 Sum_probs=36.8
Q ss_pred hcCCCC-CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 457 NSLPKT-TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 457 ~~ip~~-~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
++.|++ +.+|+++|++| =||+.+++.|.++|.+|+. .+.++.+.++..+
T Consensus 2 ~~~~~~~~~kiLVtG~tG--fiG~~l~~~L~~~g~~V~~~~~~~~~~~~v~~~l 53 (298)
T PLN02778 2 NGTAGSATLKFLIYGKTG--WIGGLLGKLCQEQGIDFHYGSGRLENRASLEADI 53 (298)
T ss_pred CCCCCCCCCeEEEECCCC--HHHHHHHHHHHhCCCEEEEecCccCCHHHHHHHH
Confidence 456663 56899999999 9999999999999999975 3334445555443
No 253
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=89.24 E-value=0.55 Score=51.90 Aligned_cols=76 Identities=20% Similarity=0.177 Sum_probs=52.2
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccC-ceEEe--cchhhhHHHHhhCchhhcccceecc---chhhcc------------
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVEAQHNLVLST---SYAAHK------------ 525 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~~~~~~~~~lv~~~---~~~~a~------------ 525 (627)
..|++.|+ | .||+++|..|++++ .+|++ |+.+...+++.....+.+--.+.+. ++.+++
T Consensus 2 ~~ilviGa-G--~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~ 78 (389)
T COG1748 2 MKILVIGA-G--GVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPP 78 (389)
T ss_pred CcEEEECC-c--hhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCc
Confidence 47899999 7 99999999999987 89999 9999999887664222111111111 122211
Q ss_pred -----HHHhcCCCCcEEeeCcC
Q 006894 526 -----TEQARAPKGTIFIPYTQ 542 (627)
Q Consensus 526 -----~e~~~a~~G~~~~~~sq 542 (627)
.-++=++.|+..+|.|=
T Consensus 79 ~~~~~i~ka~i~~gv~yvDts~ 100 (389)
T COG1748 79 FVDLTILKACIKTGVDYVDTSY 100 (389)
T ss_pred hhhHHHHHHHHHhCCCEEEccc
Confidence 33566788899998884
No 254
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=89.22 E-value=1 Score=49.60 Aligned_cols=45 Identities=20% Similarity=0.212 Sum_probs=38.6
Q ss_pred CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 460 p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
+...++|+++|. | ++|+.+++.|.++|.+|++ +++++.++++++.
T Consensus 228 ~~~~~~iiIiG~-G--~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~ 274 (453)
T PRK09496 228 EKPVKRVMIVGG-G--NIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL 274 (453)
T ss_pred CCCCCEEEEECC-C--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC
Confidence 335789999999 5 9999999999999999988 8888888887653
No 255
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=89.21 E-value=0.53 Score=52.30 Aligned_cols=37 Identities=24% Similarity=0.289 Sum_probs=32.1
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhH
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE 501 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~ 501 (627)
.++|+++||+| -||+++|+.|+++|.+|.. |++++.+
T Consensus 178 gK~VLITGASg--GIG~aLA~~La~~G~~Vi~l~r~~~~l~ 216 (406)
T PRK07424 178 GKTVAVTGASG--TLGQALLKELHQQGAKVVALTSNSDKIT 216 (406)
T ss_pred CCEEEEeCCCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 46899999998 9999999999999999987 6666554
No 256
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=89.20 E-value=0.53 Score=46.91 Aligned_cols=30 Identities=23% Similarity=0.320 Sum_probs=27.3
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
.+.|+++|++| .||+++|+.|+++|.++.+
T Consensus 6 ~~~vlitGasg--~iG~~l~~~l~~~g~~v~~ 35 (252)
T PRK06077 6 DKVVVVTGSGR--GIGRAIAVRLAKEGSLVVV 35 (252)
T ss_pred CcEEEEeCCCC--hHHHHHHHHHHHCCCEEEE
Confidence 36899999998 9999999999999999876
No 257
>PRK06398 aldose dehydrogenase; Validated
Probab=89.14 E-value=0.43 Score=48.53 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=29.8
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchh
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 498 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~ 498 (627)
.+.|+++|++| -||+++|+.|+++|.+|++ |+++
T Consensus 6 gk~vlItGas~--gIG~~ia~~l~~~G~~Vi~~~r~~~ 41 (258)
T PRK06398 6 DKVAIVTGGSQ--GIGKAVVNRLKEEGSNVINFDIKEP 41 (258)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCcc
Confidence 36899999998 9999999999999999998 5543
No 258
>PRK08278 short chain dehydrogenase; Provisional
Probab=89.08 E-value=0.49 Score=48.58 Aligned_cols=34 Identities=12% Similarity=0.221 Sum_probs=29.8
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchh
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 498 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~ 498 (627)
.+.++++|++| -||+++|+.|+++|.+|.+ |+.+
T Consensus 6 ~k~vlItGas~--gIG~~ia~~l~~~G~~V~~~~r~~~ 41 (273)
T PRK08278 6 GKTLFITGASR--GIGLAIALRAARDGANIVIAAKTAE 41 (273)
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCCEEEEEecccc
Confidence 36899999998 9999999999999999988 5544
No 259
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=89.01 E-value=0.65 Score=45.90 Aligned_cols=41 Identities=20% Similarity=0.247 Sum_probs=32.7
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--c-chhhhHHHHhh
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--I-CKDDYEKLKLR 506 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~-~~~~~~~l~~~ 506 (627)
+.++++|++| -||+++|+.|+++|.+|++ | ++++.+++..+
T Consensus 1 k~~lItG~sg--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 44 (242)
T TIGR01829 1 RIALVTGGMG--GIGTAICQRLAKDGYRVAANCGPNEERAEAWLQE 44 (242)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH
Confidence 4689999998 9999999999999999877 4 55555554443
No 260
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=88.98 E-value=0.62 Score=47.55 Aligned_cols=33 Identities=15% Similarity=0.120 Sum_probs=27.6
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cc
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--IC 496 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~ 496 (627)
+.++++|+++.+-||+++|+.|+++|.+|.+ |+
T Consensus 9 k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~ 43 (260)
T PRK06603 9 KKGLITGIANNMSISWAIAQLAKKHGAELWFTYQS 43 (260)
T ss_pred cEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCc
Confidence 5789999984124999999999999999988 55
No 261
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=88.92 E-value=0.62 Score=49.51 Aligned_cols=142 Identities=18% Similarity=0.227 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeEec-CCCcccc----------eeecCCh
Q 006894 393 EAINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLER-QPNKLKI----------KVVDGSS 449 (627)
Q Consensus 393 ~~in~~Ie~Ai~~A~~~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~r-~p~~L~i----------rvv~Gns 449 (627)
++-+.-+....+.|++.|++.. -|. .++..+++|.|- ++.+.. -|.+++. +=|||=+
T Consensus 43 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~ 122 (285)
T PRK14191 43 PASQTYVNMKIKACERVGMDSDLHTLQENTTEAELLSLIKDLNTDQNIDGILVQLPLPRHIDTKMVLEAIDPNKDVDGFH 122 (285)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccC
Confidence 3444556666778888888754 444 223336677763 333331 1222331 2234433
Q ss_pred ----------------hHHHHHHhcC-----CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe-cchhhhHHHHhhC
Q 006894 450 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 507 (627)
Q Consensus 450 ----------------ltaavv~~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~ 507 (627)
-|++.|++=+ +-.-++|+++|... -||+-+|..|.++|..|++ .+.. ++|++
T Consensus 123 ~~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~--~VG~Pla~lL~~~gAtVtv~hs~t--~~l~~-- 196 (285)
T PRK14191 123 PLNIGKLCSQLDGFVPATPMGVMRLLKHYHIEIKGKDVVIIGASN--IVGKPLAMLMLNAGASVSVCHILT--KDLSF-- 196 (285)
T ss_pred hhhHHHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCc--hhHHHHHHHHHHCCCEEEEEeCCc--HHHHH--
Confidence 4666666544 44678999999998 9999999999999999999 2221 12221
Q ss_pred chhhcccceeccchhhccHHHhcCCCCcEEeeCc
Q 006894 508 PVEAQHNLVLSTSYAAHKTEQARAPKGTIFIPYT 541 (627)
Q Consensus 508 ~~~~~~~lv~~~~~~~a~~e~~~a~~G~~~~~~s 541 (627)
.-++.++|-+..-.......++.++|++++|+.
T Consensus 197 -~~~~ADIvV~AvG~p~~i~~~~vk~GavVIDvG 229 (285)
T PRK14191 197 -YTQNADIVCVGVGKPDLIKASMVKKGAVVVDIG 229 (285)
T ss_pred -HHHhCCEEEEecCCCCcCCHHHcCCCcEEEEee
Confidence 123344443332223336678999999999998
No 262
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=88.81 E-value=0.61 Score=49.44 Aligned_cols=41 Identities=15% Similarity=0.101 Sum_probs=32.0
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccC--ceEEe--cchhhhHHHHhh
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMG--IKVAT--ICKDDYEKLKLR 506 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~--~~v~l--~~~~~~~~l~~~ 506 (627)
+.|+|+|++| -||+++|+.|+++| .+|.+ |+..+.++++++
T Consensus 5 k~vLVTGatG--~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~ 49 (324)
T TIGR03589 5 KSILITGGTG--SFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQK 49 (324)
T ss_pred CEEEEeCCCC--HHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHH
Confidence 5799999999 99999999999875 67776 555555555443
No 263
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=88.69 E-value=0.72 Score=44.12 Aligned_cols=39 Identities=18% Similarity=0.224 Sum_probs=35.4
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 506 (627)
+|.++|+- ..|.|+|..|+++|.+|+| |+++..+.|+++
T Consensus 1 KI~ViGaG---~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~ 41 (157)
T PF01210_consen 1 KIAVIGAG---NWGTALAALLADNGHEVTLWGRDEEQIEEINET 41 (157)
T ss_dssp EEEEESSS---HHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHH
T ss_pred CEEEECcC---HHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHh
Confidence 58899998 8999999999999999999 888889988865
No 264
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=88.68 E-value=0.8 Score=48.58 Aligned_cols=153 Identities=20% Similarity=0.224 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeEecC-CCcccc----------eeecCCh-
Q 006894 394 AINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGSS- 449 (627)
Q Consensus 394 ~in~~Ie~Ai~~A~~~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~r~-p~~L~i----------rvv~Gns- 449 (627)
+-+.-+....+.|++.|++.. -|. .++..++||.|- ++.+..= |.+++. +=|||=+
T Consensus 44 as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~~ 123 (281)
T PRK14183 44 ASHTYVKMKAKACDRVGIYSITHEMPSTISQKEILETIAMMNNNPNIDGILVQLPLPKHIDTTKILEAIDPKKDVDGFHP 123 (281)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCccCeEEEeCCCCCCCCHHHHHhccCchhcccccCh
Confidence 344455666778888888753 342 223335677763 3333321 222331 2234433
Q ss_pred ---------------hHHHHHHhcC-----CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe-cchhhhHHHHhhCc
Q 006894 450 ---------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIP 508 (627)
Q Consensus 450 ---------------ltaavv~~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~~ 508 (627)
-|++.|++=+ +-.-++|+++|... -||+-+|.+|.++|..|++ .++- ++|++.
T Consensus 124 ~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--~VG~Pla~lL~~~~AtVti~hs~T--~~l~~~-- 197 (281)
T PRK14183 124 YNVGRLVTGLDGFVPCTPLGVMELLEEYEIDVKGKDVCVVGASN--IVGKPMAALLLNANATVDICHIFT--KDLKAH-- 197 (281)
T ss_pred hhhhHHhcCCCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC--cCHHHH--
Confidence 3666666543 44688999999997 9999999999999999999 2211 122211
Q ss_pred hhhcccceeccchhhccHHHhcCCCCcEEeeCcCCCC--c-CCCCCeeE
Q 006894 509 VEAQHNLVLSTSYAAHKTEQARAPKGTIFIPYTQIPP--R-KLRKDCFY 554 (627)
Q Consensus 509 ~~~~~~lv~~~~~~~a~~e~~~a~~G~~~~~~sq~P~--~-~~R~dc~~ 554 (627)
-++.++|-+..-.+.....++.++|++++|+. .-. . ++-.|+-+
T Consensus 198 -~~~ADIvV~AvGkp~~i~~~~vk~gavvIDvG-in~~~~gkl~GDVd~ 244 (281)
T PRK14183 198 -TKKADIVIVGVGKPNLITEDMVKEGAIVIDIG-INRTEDGRLVGDVDF 244 (281)
T ss_pred -HhhCCEEEEecCcccccCHHHcCCCcEEEEee-ccccCCCCeECCccH
Confidence 23344443333333347789999999999988 222 1 44455554
No 265
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=88.67 E-value=0.46 Score=50.43 Aligned_cols=155 Identities=20% Similarity=0.257 Sum_probs=93.3
Q ss_pred hHHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeEecC-CCcccc----------eeecCC
Q 006894 392 REAINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLKI----------KVVDGS 448 (627)
Q Consensus 392 ~~~in~~Ie~Ai~~A~~~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~r~-p~~L~i----------rvv~Gn 448 (627)
.++-+.-+...++.|++.|+++. -|. .++..++||.|- ++.++.= |.+++. +=|||=
T Consensus 42 d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl 121 (284)
T PRK14170 42 NQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGF 121 (284)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcccC
Confidence 33455556777788999998764 344 333446677774 3333311 222331 224443
Q ss_pred h----------------hHHHHHHhcC-----CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe-cchhhhHHHHhh
Q 006894 449 S----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLR 506 (627)
Q Consensus 449 s----------------ltaavv~~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~ 506 (627)
+ -|++.|++=+ +-.-++|+++|.+. -||+-+|.+|.++|..|++ .++- .+|++.
T Consensus 122 ~p~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~--iVGkPla~lL~~~~atVtichs~T--~~l~~~ 197 (284)
T PRK14170 122 HPVNVGNLFIGKDSFVPCTPAGIIELIKSTGTQIEGKRAVVIGRSN--IVGKPVAQLLLNENATVTIAHSRT--KDLPQV 197 (284)
T ss_pred ChhhhhHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC--CCHHHH
Confidence 3 3666666544 34688999999998 9999999999999999998 2222 122211
Q ss_pred CchhhcccceeccchhhccHHHhcCCCCcEEeeCcCCCC--c-CCCCCeeE
Q 006894 507 IPVEAQHNLVLSTSYAAHKTEQARAPKGTIFIPYTQIPP--R-KLRKDCFY 554 (627)
Q Consensus 507 ~~~~~~~~lv~~~~~~~a~~e~~~a~~G~~~~~~sq~P~--~-~~R~dc~~ 554 (627)
+ ++.++|-+.--.+.....++.++|++++|+. .-. . ++-.|+-+
T Consensus 198 ~---~~ADIvI~AvG~~~~i~~~~vk~GavVIDvG-in~~~~gkl~GDvdf 244 (284)
T PRK14170 198 A---KEADILVVATGLAKFVKKDYIKPGAIVIDVG-MDRDENNKLCGDVDF 244 (284)
T ss_pred H---hhCCEEEEecCCcCccCHHHcCCCCEEEEcc-CcccCCCCeecccch
Confidence 1 2233432222222336788999999999998 332 1 34455544
No 266
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=88.67 E-value=0.5 Score=49.17 Aligned_cols=34 Identities=24% Similarity=0.204 Sum_probs=29.7
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhh
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~ 499 (627)
++|+|+|+|| -||+.+++.|.++|.+|.. |+.++
T Consensus 5 ~~ilVtGatG--fIG~~l~~~L~~~g~~V~~~~r~~~~ 40 (322)
T PLN02662 5 KVVCVTGASG--YIASWLVKLLLQRGYTVKATVRDPND 40 (322)
T ss_pred CEEEEECChH--HHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence 6899999999 9999999999999999875 65543
No 267
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=88.63 E-value=0.52 Score=50.09 Aligned_cols=83 Identities=16% Similarity=0.236 Sum_probs=56.0
Q ss_pred HHHHHHhcC-----CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCchhhcccceeccchhh
Q 006894 451 AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA 523 (627)
Q Consensus 451 taavv~~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~lv~~~~~~~ 523 (627)
|+..|++-+ +-.-++|+++|... -||+-+|..|.++|..|++ ...+. |++. .++.++|.+..-..
T Consensus 147 Tp~av~~ll~~~~i~l~Gk~vvViGrs~--iVGkPla~lL~~~~atVtv~hs~T~~---l~~~---~~~ADIvv~AvG~p 218 (287)
T PRK14176 147 TPHGVIRALEEYGVDIEGKNAVIVGHSN--VVGKPMAAMLLNRNATVSVCHVFTDD---LKKY---TLDADILVVATGVK 218 (287)
T ss_pred cHHHHHHHHHHcCCCCCCCEEEEECCCc--ccHHHHHHHHHHCCCEEEEEeccCCC---HHHH---HhhCCEEEEccCCc
Confidence 566665544 34678999999997 8999999999999999999 22222 2221 13334443221112
Q ss_pred ccHHHhcCCCCcEEeeCc
Q 006894 524 HKTEQARAPKGTIFIPYT 541 (627)
Q Consensus 524 a~~e~~~a~~G~~~~~~s 541 (627)
.....++.++|++++|+.
T Consensus 219 ~~i~~~~vk~gavVIDvG 236 (287)
T PRK14176 219 HLIKADMVKEGAVIFDVG 236 (287)
T ss_pred cccCHHHcCCCcEEEEec
Confidence 235667999999999998
No 268
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=88.60 E-value=0.61 Score=45.87 Aligned_cols=42 Identities=19% Similarity=0.321 Sum_probs=33.6
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 509 (627)
+|.|+|+ | .+|+.||..+++.|.+|.+ ++++.+++.++++..
T Consensus 1 ~V~ViGa-G--~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~ 44 (180)
T PF02737_consen 1 KVAVIGA-G--TMGRGIAALFARAGYEVTLYDRSPEALERARKRIER 44 (180)
T ss_dssp EEEEES--S--HHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred CEEEEcC-C--HHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence 5899999 5 9999999999999999999 777776665554433
No 269
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=88.60 E-value=0.62 Score=49.39 Aligned_cols=105 Identities=15% Similarity=0.156 Sum_probs=63.2
Q ss_pred CcccccchhhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeEecCCCcccceeecCChhHHHHHHhcCCCC
Q 006894 383 IVQYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKT 462 (627)
Q Consensus 383 ~~~y~~~~~~~~in~~Ie~Ai~~A~~~G~kv~~LG~ln~~e~ln~~g~~~~~r~p~~L~irvv~Gnsltaavv~~~ip~~ 462 (627)
|+--.+|.-.+ +-+.+.+.=..|++.| +.|-.. +.+|. ...-| |||--+..+.--..+...
T Consensus 63 G~nVTiP~K~~-~~~~~D~l~~~A~~iG-------AVNTv~--~~~g~-l~G~N--------TD~~Gf~~~l~~~~~~~~ 123 (288)
T PRK12749 63 GTGVSMPNKQL-ACEYVDELTPAAKLVG-------AINTIV--NDDGY-LRGYN--------TDGTGHIRAIKESGFDIK 123 (288)
T ss_pred EEEECcCCHHH-HHHHhccCCHHHHHhC-------ceeEEE--ccCCE-EEEEe--------cCHHHHHHHHHhcCCCcC
Confidence 44445555433 4444555555566554 455431 23444 22223 666666666543444444
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCc-eEEe--cch---hhhHHHHhhCch
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICK---DDYEKLKLRIPV 509 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~-~v~l--~~~---~~~~~l~~~~~~ 509 (627)
.++|+|.||-| . ||||+-.|++.|+ ++++ |+. +|-++|.+++..
T Consensus 124 ~k~vlvlGaGG--a-arAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~ 173 (288)
T PRK12749 124 GKTMVLLGAGG--A-STAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNE 173 (288)
T ss_pred CCEEEEECCcH--H-HHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhh
Confidence 56899999987 3 8999999998886 5666 774 477777766543
No 270
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=88.29 E-value=0.51 Score=47.79 Aligned_cols=35 Identities=20% Similarity=0.309 Sum_probs=30.3
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhh
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~ 499 (627)
.+.|+++|++| -||+++|+.|+++|.+|.+ +++++
T Consensus 9 ~k~vlItG~s~--gIG~~la~~l~~~G~~v~~~~~~~~~ 45 (266)
T PRK06171 9 GKIIIVTGGSS--GIGLAIVKELLANGANVVNADIHGGD 45 (266)
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 46799999998 9999999999999999998 54443
No 271
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=88.18 E-value=1.9 Score=46.19 Aligned_cols=60 Identities=17% Similarity=0.145 Sum_probs=43.8
Q ss_pred ChhHHHHHHhcC--CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch
Q 006894 448 SSLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 448 nsltaavv~~~i--p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 509 (627)
+.+||+..+... .+....|++.|++| .||.++++.+..+|.+|.. +++++.+.+++++..
T Consensus 142 ~~~TA~~al~~~~~~~~g~~VlV~GaaG--~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa 205 (348)
T PLN03154 142 AGFTAYAGFYEVCSPKKGDSVFVSAASG--AVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF 205 (348)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEecCcc--HHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCC
Confidence 445555555332 34457899999998 9999999888788999876 778888888755544
No 272
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=88.15 E-value=1.1 Score=47.55 Aligned_cols=32 Identities=19% Similarity=0.161 Sum_probs=28.7
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cch
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK 497 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~ 497 (627)
++|+|+||+| =||+.+++.|.++|.+|.. |+.
T Consensus 1 ~~vlVTGatG--fIG~~l~~~L~~~G~~V~~~~r~~ 34 (343)
T TIGR01472 1 KIALITGITG--QDGSYLAEFLLEKGYEVHGLIRRS 34 (343)
T ss_pred CeEEEEcCCC--cHHHHHHHHHHHCCCEEEEEecCC
Confidence 4799999999 9999999999999999987 554
No 273
>PRK12744 short chain dehydrogenase; Provisional
Probab=88.15 E-value=0.65 Score=46.84 Aligned_cols=30 Identities=23% Similarity=0.368 Sum_probs=26.5
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
.+.|+++|++| -||+++|+.|+++|.+|.+
T Consensus 8 ~k~vlItGa~~--gIG~~~a~~l~~~G~~vv~ 37 (257)
T PRK12744 8 GKVVLIAGGAK--NLGGLIARDLAAQGAKAVA 37 (257)
T ss_pred CcEEEEECCCc--hHHHHHHHHHHHCCCcEEE
Confidence 36899999998 9999999999999999544
No 274
>PRK06940 short chain dehydrogenase; Provisional
Probab=88.08 E-value=0.7 Score=47.66 Aligned_cols=41 Identities=20% Similarity=0.261 Sum_probs=33.3
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
+.|+++|+ | -||+++|+.|+ +|.+|.+ |+.++.+++.+++.
T Consensus 3 k~~lItGa-~--gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~ 45 (275)
T PRK06940 3 EVVVVIGA-G--GIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLR 45 (275)
T ss_pred CEEEEECC-C--hHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHH
Confidence 46788887 5 79999999997 7999998 88887777766654
No 275
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=88.06 E-value=0.67 Score=46.97 Aligned_cols=32 Identities=13% Similarity=0.282 Sum_probs=27.8
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
.+.|+++|++|++-||+++|+.|+++|.+|.+
T Consensus 6 ~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~ 37 (256)
T PRK12859 6 NKVAVVTGVSRLDGIGAAICKELAEAGADIFF 37 (256)
T ss_pred CcEEEEECCCCCCChHHHHHHHHHHCCCeEEE
Confidence 46899999995337999999999999999987
No 276
>PRK06701 short chain dehydrogenase; Provisional
Probab=87.98 E-value=0.7 Score=48.18 Aligned_cols=43 Identities=23% Similarity=0.347 Sum_probs=33.7
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cch-hhhHHHHhhC
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI 507 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~-~~~~~l~~~~ 507 (627)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++ ++.+.+.+++
T Consensus 46 ~k~iLItGasg--gIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~ 91 (290)
T PRK06701 46 GKVALITGGDS--GIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRV 91 (290)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHH
Confidence 36799999998 9999999999999999988 543 3345554443
No 277
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=87.87 E-value=0.67 Score=47.27 Aligned_cols=32 Identities=19% Similarity=0.317 Sum_probs=27.2
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
.+.|+++|++|.+-||+++|+.|+++|.+|.+
T Consensus 6 ~k~~lItGas~~~GIG~aia~~la~~G~~v~~ 37 (258)
T PRK07370 6 GKKALVTGIANNRSIAWGIAQQLHAAGAELGI 37 (258)
T ss_pred CcEEEEeCCCCCCchHHHHHHHHHHCCCEEEE
Confidence 46789999972138999999999999999987
No 278
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=87.84 E-value=5 Score=45.04 Aligned_cols=134 Identities=13% Similarity=0.102 Sum_probs=79.3
Q ss_pred CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh-C--c--hh--hcccce-eccchhhcc--HH
Q 006894 460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-I--P--VE--AQHNLV-LSTSYAAHK--TE 527 (627)
Q Consensus 460 p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~-~--~--~~--~~~~lv-~~~~~~~a~--~e 527 (627)
....++|+|+|. | .||+.+|+.|...|.+|++ +++.+....... . . ++ .+.++| ..|.-.... ..
T Consensus 209 ~l~Gk~VlViG~-G--~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~v~~l~eal~~aDVVI~aTG~~~vI~~~~ 285 (425)
T PRK05476 209 LIAGKVVVVAGY-G--DVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFRVMTMEEAAELGDIFVTATGNKDVITAEH 285 (425)
T ss_pred CCCCCEEEEECC-C--HHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCEecCHHHHHhCCCEEEECCCCHHHHHHHH
Confidence 335678999997 5 9999999999999999999 555443221111 0 0 00 122333 222112222 23
Q ss_pred HhcCCCCcEEeeCcCCCC-------------c-CCCCCeeEeccCc---ccc--CCCccccccccccccchhHHHHHHhH
Q 006894 528 QARAPKGTIFIPYTQIPP-------------R-KLRKDCFYHSTPA---MII--PPSLSNMHSCENWLGRRVMSAWRIAG 588 (627)
Q Consensus 528 ~~~a~~G~~~~~~sq~P~-------------~-~~R~dc~~~~~p~---~~~--P~~~~~~~~~e~~~pr~~~~Ac~a~~ 588 (627)
-+.+++|++++....++. . +.|+.+.-...|. +.+ -|.+-|+- |..+.|..+|.--+|.=
T Consensus 286 ~~~mK~GailiNvG~~d~Eid~~~L~~~~~~~~~v~~~v~~y~~~~g~~i~lLa~GrlvNl~-~~~ghp~~vmd~sfa~q 364 (425)
T PRK05476 286 MEAMKDGAILANIGHFDNEIDVAALEELAVKWREIKPQVDEYTLPDGKRIILLAEGRLVNLG-AATGHPSEVMDMSFANQ 364 (425)
T ss_pred HhcCCCCCEEEEcCCCCCccChHHHhhcCcceeecCCCceEEEeCCCCEEEEEeCCcccccC-CCCCCcceeeCHHHHHH
Confidence 577899999987774331 1 3344444333332 222 45566776 88999999987766655
Q ss_pred HHhhhcCCC
Q 006894 589 IIHALEGWD 597 (627)
Q Consensus 589 ~~~alEg~~ 597 (627)
.+-+++=|.
T Consensus 365 ~l~~~~l~~ 373 (425)
T PRK05476 365 ALAQIELFT 373 (425)
T ss_pred HHHHHHHHh
Confidence 555555554
No 279
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=87.79 E-value=0.64 Score=54.79 Aligned_cols=44 Identities=16% Similarity=0.207 Sum_probs=38.2
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++.
T Consensus 414 gkvvLVTGasg--gIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~ 459 (676)
T TIGR02632 414 RRVAFVTGGAG--GIGRETARRLAAEGAHVVLADLNLEAAEAVAAEIN 459 (676)
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHH
Confidence 56899999998 9999999999999999988 88888877766654
No 280
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=87.59 E-value=0.94 Score=48.00 Aligned_cols=95 Identities=14% Similarity=0.182 Sum_probs=61.6
Q ss_pred HHHHHHhcC-----CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe-cc-hhhhHHHHhhCchhhcccceeccchhh
Q 006894 451 AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-IC-KDDYEKLKLRIPVEAQHNLVLSTSYAA 523 (627)
Q Consensus 451 taavv~~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l-~~-~~~~~~l~~~~~~~~~~~lv~~~~~~~ 523 (627)
|++.|++=+ +-.-++|+++|... -||+-++..|-++|..|++ .+ ...+.++ -++.++|-+.--.+
T Consensus 141 Tp~av~~lL~~~~i~l~Gk~vvViGrS~--~VGkPla~lL~~~~AtVt~chs~T~~l~~~------~~~ADIvIsAvGkp 212 (278)
T PRK14172 141 TPNSVITLIKSLNIDIEGKEVVVIGRSN--IVGKPVAQLLLNENATVTICHSKTKNLKEV------CKKADILVVAIGRP 212 (278)
T ss_pred CHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEeCCCCCCHHHH------HhhCCEEEEcCCCc
Confidence 566665533 44678999999998 9999999999999999999 22 2222221 12334433222222
Q ss_pred ccHHHhcCCCCcEEeeCcCCCCc--CCCCCeeE
Q 006894 524 HKTEQARAPKGTIFIPYTQIPPR--KLRKDCFY 554 (627)
Q Consensus 524 a~~e~~~a~~G~~~~~~sq~P~~--~~R~dc~~ 554 (627)
.....++.++|++++|+- .-+. ++-.|+-+
T Consensus 213 ~~i~~~~ik~gavVIDvG-in~~~gkl~GDvd~ 244 (278)
T PRK14172 213 KFIDEEYVKEGAIVIDVG-TSSVNGKITGDVNF 244 (278)
T ss_pred CccCHHHcCCCcEEEEee-ccccCCceeeeccH
Confidence 336788999999999995 2121 44456554
No 281
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=87.53 E-value=1.5 Score=48.77 Aligned_cols=144 Identities=22% Similarity=0.249 Sum_probs=82.0
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccC-ceEEe--cchhhhHHHHhhCchh-----------hcccce-eccchhhcc-
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIPVE-----------AQHNLV-LSTSYAAHK- 525 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~~~~~-----------~~~~lv-~~~~~~~a~- 525 (627)
..++|+++|+ | .+|+.++++|++.| .+|++ |+.++.+++.++++.. .+.++| ..|+..+..
T Consensus 179 ~~~~VlViGa-G--~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i~~~~l~~~l~~aDvVi~aT~s~~~ii 255 (417)
T TIGR01035 179 KGKKALLIGA-G--EMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAVKFEDLEEYLAEADIVISSTGAPHPIV 255 (417)
T ss_pred cCCEEEEECC-h--HHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEeeHHHHHHHHhhCCEEEECCCCCCceE
Confidence 4578999998 7 99999999999888 56777 8878877777654321 123333 222211111
Q ss_pred ----HHHh-c-CCCCcEEeeCcCCCCc---CC--CCCeeEeccCccccCCCccccccccccccchhHHHHHHhHHHh---
Q 006894 526 ----TEQA-R-APKGTIFIPYTQIPPR---KL--RKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSAWRIAGIIH--- 591 (627)
Q Consensus 526 ----~e~~-~-a~~G~~~~~~sq~P~~---~~--R~dc~~~~~p~~~~P~~~~~~~~~e~~~pr~~~~Ac~a~~~~~--- 591 (627)
.++. . -+.+..++|.+ .|.. +. -+++.+... ++++.+ ++-.+..|.-.+=.|+.||-
T Consensus 256 ~~e~l~~~~~~~~~~~~viDla-~Prdid~~v~~l~~v~l~~v------Ddl~~~--~~~n~~~r~~~~~~a~~ii~~~~ 326 (417)
T TIGR01035 256 SKEDVERALRERTRPLFIIDIA-VPRDVDPAVARLEGVFLYDV------DDLQPV--VEENLAERREEAEKAEEIVEEET 326 (417)
T ss_pred cHHHHHHHHhcCCCCeEEEEeC-CCCCCChhhcCcCCeEEEEH------HHHHHH--HHHhHHHHHHHHHHHHHHHHHHH
Confidence 1111 1 12456888888 7743 22 123332211 222211 23345556656667888876
Q ss_pred -hhcCCCCC-ccch-h--h-hhHHHHHHHHHh
Q 006894 592 -ALEGWDLN-ECGQ-T--M-CDIHQVWHASLR 617 (627)
Q Consensus 592 -alEg~~~~-e~G~-i--v-~~i~~i~~aa~k 617 (627)
+++.|... .+-. | + +++++|-+.-++
T Consensus 327 ~~f~~w~~~~~~~p~I~~lr~~~~~i~~~el~ 358 (417)
T TIGR01035 327 AEFKQWLRSLEVEPTIKALRSLAEIVREKELE 358 (417)
T ss_pred HHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 67777655 5555 4 3 666666554443
No 282
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=87.52 E-value=2.2 Score=46.71 Aligned_cols=79 Identities=16% Similarity=0.217 Sum_probs=53.2
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch---------h------hcccceeccc-hh--
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV---------E------AQHNLVLSTS-YA-- 522 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~---------~------~~~~lv~~~~-~~-- 522 (627)
.++|+|+|+ | .+|+.+++.|.+.|.+|++ ++.++.+.++++... + .+.++|..+. ..
T Consensus 167 ~~~VlViGa-G--~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~ 243 (370)
T TIGR00518 167 PGDVTIIGG-G--VVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGA 243 (370)
T ss_pred CceEEEEcC-C--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCC
Confidence 356999999 6 9999999999999999888 777887777655322 0 1233332221 11
Q ss_pred --hc---cHHHhcCCCCcEEeeCcCCCC
Q 006894 523 --AH---KTEQARAPKGTIFIPYTQIPP 545 (627)
Q Consensus 523 --~a---~~e~~~a~~G~~~~~~sq~P~ 545 (627)
.. ....+.+++|++++|++ ..+
T Consensus 244 ~~p~lit~~~l~~mk~g~vIvDva-~d~ 270 (370)
T TIGR00518 244 KAPKLVSNSLVAQMKPGAVIVDVA-IDQ 270 (370)
T ss_pred CCCcCcCHHHHhcCCCCCEEEEEe-cCC
Confidence 11 13356789999999998 553
No 283
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=87.43 E-value=0.79 Score=47.16 Aligned_cols=31 Identities=19% Similarity=0.380 Sum_probs=26.7
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
+.++++|+++..-||+|+|+.|+++|.+|.+
T Consensus 7 k~~lITGas~~~GIG~aia~~la~~G~~vil 37 (262)
T PRK07984 7 KRILVTGVASKLSIAYGIAQAMHREGAELAF 37 (262)
T ss_pred CEEEEeCCCCCccHHHHHHHHHHHCCCEEEE
Confidence 5789999983126999999999999999988
No 284
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=87.39 E-value=0.72 Score=48.31 Aligned_cols=36 Identities=17% Similarity=0.111 Sum_probs=30.7
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhh
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY 500 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~ 500 (627)
.+.|+++|++| -||+++++.|.++|.+|.+ |+.++.
T Consensus 5 ~k~vlVtG~~G--~IG~~l~~~L~~~G~~V~~~~r~~~~~ 42 (325)
T PLN02989 5 GKVVCVTGASG--YIASWIVKLLLFRGYTINATVRDPKDR 42 (325)
T ss_pred CCEEEEECCch--HHHHHHHHHHHHCCCEEEEEEcCCcch
Confidence 46899999999 9999999999999999866 665543
No 285
>PRK08309 short chain dehydrogenase; Provisional
Probab=87.38 E-value=0.78 Score=45.12 Aligned_cols=41 Identities=24% Similarity=0.335 Sum_probs=33.6
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
.|+++|+|| -+| ++++.|+++|.+|.+ |++++.+.++.+++
T Consensus 2 ~vlVtGGtG--~gg-~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~ 44 (177)
T PRK08309 2 HALVIGGTG--MLK-RVSLWLCEKGFHVSVIARREVKLENVKREST 44 (177)
T ss_pred EEEEECcCH--HHH-HHHHHHHHCcCEEEEEECCHHHHHHHHHHhh
Confidence 589999996 555 599999999999988 88888888776554
No 286
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=87.36 E-value=1 Score=47.82 Aligned_cols=153 Identities=17% Similarity=0.201 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeEec-CCCcccc------------------
Q 006894 394 AINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLER-QPNKLKI------------------ 442 (627)
Q Consensus 394 ~in~~Ie~Ai~~A~~~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~r-~p~~L~i------------------ 442 (627)
+-+.-+...++.|++.|++..- |. .++..+++|.|- ++.++. -|++++.
T Consensus 43 as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~d~~V~GIivqlPLp~~i~~~~i~~~I~p~KDVDGl~~ 122 (282)
T PRK14182 43 ASAIYVRGKRKDCEEVGITSVEHHLPATTTQAELLALIARLNADPAVHGILVQLPLPKHVDERAVLDAISPAKDADGFHP 122 (282)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcCCCCH
Confidence 3445566677889999988654 32 233336677764 333331 1232431
Q ss_pred ----eeecCC-----hhHHHHHHhc-----CCCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe-cchhhhHHHHhhC
Q 006894 443 ----KVVDGS-----SLAAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRI 507 (627)
Q Consensus 443 ----rvv~Gn-----sltaavv~~~-----ip~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~ 507 (627)
|+..|+ .-|++.|++= |+-.-++|+++|... -||+-++.+|.++|..|++ .++- ++|++..
T Consensus 123 ~n~g~l~~g~~~~~~PcTp~avi~ll~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~AtVtichs~T--~nl~~~~ 198 (282)
T PRK14182 123 FNVGALSIGIAGVPRPCTPAGVMRMLDEARVDPKGKRALVVGRSN--IVGKPMAMMLLERHATVTIAHSRT--ADLAGEV 198 (282)
T ss_pred hHHHHHhCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCC--CCHHHHH
Confidence 222232 2366666653 345688999999998 9999999999999999999 2221 1222211
Q ss_pred chhhcccceeccchhhccHHHhcCCCCcEEeeCcCCCC--c-CCCCCeeE
Q 006894 508 PVEAQHNLVLSTSYAAHKTEQARAPKGTIFIPYTQIPP--R-KLRKDCFY 554 (627)
Q Consensus 508 ~~~~~~~lv~~~~~~~a~~e~~~a~~G~~~~~~sq~P~--~-~~R~dc~~ 554 (627)
++.++|-+.--.+.....++.++|++++|+. .-. . ++..|+-+
T Consensus 199 ---~~ADIvI~AvGk~~~i~~~~ik~gaiVIDvG-in~~~~gkl~GDVd~ 244 (282)
T PRK14182 199 ---GRADILVAAIGKAELVKGAWVKEGAVVIDVG-MNRLADGKLVGDVEF 244 (282)
T ss_pred ---hhCCEEEEecCCcCccCHHHcCCCCEEEEee-ceecCCCCeeCCCCH
Confidence 2334432222223347789999999999998 322 1 34456554
No 287
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=87.35 E-value=0.82 Score=48.44 Aligned_cols=141 Identities=16% Similarity=0.212 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeEec-CCCcccc-----------------
Q 006894 393 EAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLER-QPNKLKI----------------- 442 (627)
Q Consensus 393 ~~in~~Ie~Ai~~A~~~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~r-~p~~L~i----------------- 442 (627)
.+-+.-+..-++.|++.|++..- |- .+...++||.|- ++.+.. -|++++.
T Consensus 38 ~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~v~~~I~p~KDVDGl~ 117 (279)
T PRK14178 38 PASQMYVRMKHRACERVGIGSVGIELPGDATTRTVLERIRRLNEDPDINGILVQLPLPKGVDTERVIAAILPEKDVDGFH 117 (279)
T ss_pred hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccCcccCC
Confidence 34445566677889999998643 42 333346677775 333331 1332331
Q ss_pred -----eeecCC----hhHHHHHHhcC-----CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh
Q 006894 443 -----KVVDGS----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (627)
Q Consensus 443 -----rvv~Gn----sltaavv~~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 506 (627)
|+..|+ .-|++.|++=+ +-.-++|.++|... -+|+.+|..|.++|..|++ ++.+ +|++.
T Consensus 118 ~~n~g~l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~--~vGrpla~lL~~~~atVtv~hs~t~---~L~~~ 192 (279)
T PRK14178 118 PLNLGRLVSGLPGFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSI--DVGRPMAALLLNADATVTICHSKTE---NLKAE 192 (279)
T ss_pred hhhHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCc--cccHHHHHHHHhCCCeeEEEecChh---HHHHH
Confidence 122222 23566665544 34578999999998 9999999999999999998 3332 23322
Q ss_pred CchhhcccceeccchhhccHHHhcCCCCcEEeeCc
Q 006894 507 IPVEAQHNLVLSTSYAAHKTEQARAPKGTIFIPYT 541 (627)
Q Consensus 507 ~~~~~~~~lv~~~~~~~a~~e~~~a~~G~~~~~~s 541 (627)
+ ++.++|-+.--.+.....++.+||++++|+.
T Consensus 193 ~---~~ADIvI~Avgk~~lv~~~~vk~GavVIDVg 224 (279)
T PRK14178 193 L---RQADILVSAAGKAGFITPDMVKPGATVIDVG 224 (279)
T ss_pred H---hhCCEEEECCCcccccCHHHcCCCcEEEEee
Confidence 2 2333443332222335566789999999998
No 288
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=87.30 E-value=0.66 Score=50.13 Aligned_cols=39 Identities=18% Similarity=0.156 Sum_probs=34.7
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHH
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 502 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~ 502 (627)
+.+.|+|+||+| =||+.|++.|-++|..|.- |+.++-++
T Consensus 5 ~~~~VcVTGAsG--fIgswivk~LL~rGY~V~gtVR~~~~~k~ 45 (327)
T KOG1502|consen 5 EGKKVCVTGASG--FIGSWIVKLLLSRGYTVRGTVRDPEDEKK 45 (327)
T ss_pred CCcEEEEeCCch--HHHHHHHHHHHhCCCEEEEEEcCcchhhh
Confidence 578999999999 9999999999999999987 88887444
No 289
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=87.27 E-value=1.1 Score=47.28 Aligned_cols=62 Identities=23% Similarity=0.171 Sum_probs=45.7
Q ss_pred ecCChhHHHHHHhcCCCCCcEEEEeccCCChhhHHHHHHHHhccCc-eEEe--cchhhhHHHHhhCch
Q 006894 445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 445 v~Gnsltaavv~~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~ 509 (627)
|||.-+..+.--+..+...++|++.||-| .|||++-.|++.|+ ++.+ |+.+|-++|.+++..
T Consensus 109 TD~~Gf~~~L~~~~~~~~~k~vlilGaGG---aarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~ 173 (283)
T PRK14027 109 TDVSGFGRGMEEGLPNAKLDSVVQVGAGG---VGNAVAYALVTHGVQKLQVADLDTSRAQALADVINN 173 (283)
T ss_pred CCHHHHHHHHHhcCcCcCCCeEEEECCcH---HHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhh
Confidence 66777766664222233457899999987 58999999999887 4556 888999998877543
No 290
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=87.14 E-value=1.5 Score=47.73 Aligned_cols=84 Identities=14% Similarity=0.152 Sum_probs=57.6
Q ss_pred hHHHHHHhcC-----CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCchhhcccceeccchh
Q 006894 450 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYA 522 (627)
Q Consensus 450 ltaavv~~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~lv~~~~~~ 522 (627)
-|++.|++=+ +-.-++|+|+|... -||+-+|..|.++|..|++ .....++++ -++.++|-+---.
T Consensus 196 CTp~avi~LL~~~~i~l~GK~vvVIGRS~--iVGkPla~LL~~~~ATVTicHs~T~nl~~~------~~~ADIvIsAvGk 267 (345)
T PLN02897 196 CTPKGCVELLIRSGVEIAGKNAVVIGRSN--IVGLPMSLLLQRHDATVSTVHAFTKDPEQI------TRKADIVIAAAGI 267 (345)
T ss_pred CCHHHHHHHHHHhCCCCCCCEEEEECCCc--cccHHHHHHHHHCCCEEEEEcCCCCCHHHH------HhhCCEEEEccCC
Confidence 3666666543 44688999999998 9999999999999999999 222223222 1233333222222
Q ss_pred hccHHHhcCCCCcEEeeCc
Q 006894 523 AHKTEQARAPKGTIFIPYT 541 (627)
Q Consensus 523 ~a~~e~~~a~~G~~~~~~s 541 (627)
......++.++|+++||+.
T Consensus 268 p~~v~~d~vk~GavVIDVG 286 (345)
T PLN02897 268 PNLVRGSWLKPGAVVIDVG 286 (345)
T ss_pred cCccCHHHcCCCCEEEEcc
Confidence 2336789999999999997
No 291
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=86.98 E-value=1 Score=45.38 Aligned_cols=40 Identities=15% Similarity=0.179 Sum_probs=35.1
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 506 (627)
+|.++|++| .+|+++++.|++.|.+|++ |++++.+.++++
T Consensus 2 kI~IIGG~G--~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~ 43 (219)
T TIGR01915 2 KIAVLGGTG--DQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK 43 (219)
T ss_pred EEEEEcCCC--HHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence 588999888 9999999999999999888 888888877654
No 292
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=86.94 E-value=1.8 Score=42.49 Aligned_cols=80 Identities=15% Similarity=0.179 Sum_probs=47.8
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEecchhhhHHHHhhCch---------hhcccceeccchh-hcc--HHHh
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPV---------EAQHNLVLSTSYA-AHK--TEQA 529 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~---------~~~~~lv~~~~~~-~a~--~e~~ 529 (627)
.-++|+|+|-- ++|+.||+.|...|.+|++...|....+|.-+.. -.+.+++..++-. .-. +.-+
T Consensus 22 ~Gk~vvV~GYG---~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~~~~~a~~~adi~vtaTG~~~vi~~e~~~ 98 (162)
T PF00670_consen 22 AGKRVVVIGYG---KVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVMTLEEALRDADIFVTATGNKDVITGEHFR 98 (162)
T ss_dssp TTSEEEEE--S---HHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE-HHHHTTT-SEEEE-SSSSSSB-HHHHH
T ss_pred CCCEEEEeCCC---cccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEecCHHHHHhhCCEEEECCCCccccCHHHHH
Confidence 56789999987 9999999999999999999444555555432110 0112222111211 111 4457
Q ss_pred cCCCCcEEeeCcCCC
Q 006894 530 RAPKGTIFIPYTQIP 544 (627)
Q Consensus 530 ~a~~G~~~~~~sq~P 544 (627)
.+|.|++++....++
T Consensus 99 ~mkdgail~n~Gh~d 113 (162)
T PF00670_consen 99 QMKDGAILANAGHFD 113 (162)
T ss_dssp HS-TTEEEEESSSST
T ss_pred HhcCCeEEeccCcCc
Confidence 799999999998877
No 293
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=86.82 E-value=0.75 Score=49.87 Aligned_cols=31 Identities=16% Similarity=0.195 Sum_probs=28.9
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
..++|+|+|+|| -||+++|+.|.++|.+|+.
T Consensus 20 ~~~~IlVtGgtG--fIG~~l~~~L~~~G~~V~~ 50 (370)
T PLN02695 20 EKLRICITGAGG--FIASHIARRLKAEGHYIIA 50 (370)
T ss_pred CCCEEEEECCcc--HHHHHHHHHHHhCCCEEEE
Confidence 567899999999 9999999999999999987
No 294
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=86.81 E-value=0.64 Score=50.98 Aligned_cols=41 Identities=22% Similarity=0.237 Sum_probs=33.7
Q ss_pred HhcCCCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchh
Q 006894 456 VNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKD 498 (627)
Q Consensus 456 ~~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~ 498 (627)
..+.+....+|+|+|+|| -||+.+++.|.++|.+|.. |+.+
T Consensus 53 ~~~~~~~~~kVLVtGatG--~IG~~l~~~Ll~~G~~V~~l~R~~~ 95 (390)
T PLN02657 53 FRSKEPKDVTVLVVGATG--YIGKFVVRELVRRGYNVVAVAREKS 95 (390)
T ss_pred ccccCCCCCEEEEECCCc--HHHHHHHHHHHHCCCEEEEEEechh
Confidence 334445567899999999 9999999999999999987 6654
No 295
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=86.73 E-value=1.8 Score=44.12 Aligned_cols=141 Identities=21% Similarity=0.197 Sum_probs=80.6
Q ss_pred EEEeccCCChhhHHHHHHHHhccCceEEe---cchhhhHHHHhhCchh----------hcccceecc-chhh---ccHHH
Q 006894 466 VLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVE----------AQHNLVLST-SYAA---HKTEQ 528 (627)
Q Consensus 466 V~l~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~~~----------~~~~lv~~~-~~~~---a~~e~ 528 (627)
...+|.|| .||+++|+.|++.|..|.+ |.+++++...+++... .+.++|.++ .|+. ...|-
T Consensus 3 ~~~i~GtG--niG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~~a~~~v~~~l 80 (211)
T COG2085 3 IIAIIGTG--NIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPFEAIPDVLAEL 80 (211)
T ss_pred EEEEeccC--hHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccHHHHHhHHHHH
Confidence 34566677 9999999999999999999 6666777777664432 223434333 2322 22555
Q ss_pred hcCCCCcEEeeCcCCCCc-CCCCCeeEe---ccCcc-----ccCCCccccccccccccchhHHH--HHHhHHHhhhcCCC
Q 006894 529 ARAPKGTIFIPYTQIPPR-KLRKDCFYH---STPAM-----IIPPSLSNMHSCENWLGRRVMSA--WRIAGIIHALEGWD 597 (627)
Q Consensus 529 ~~a~~G~~~~~~sq~P~~-~~R~dc~~~---~~p~~-----~~P~~~~~~~~~e~~~pr~~~~A--c~a~~~~~alEg~~ 597 (627)
.++-.|-+++|.+ .|-. ..++--+|. +..+= -+|++ +++.| --.++.+..+..-.
T Consensus 81 ~~~~~~KIvID~t-np~~~~~~~~~~~~~~~~~saae~va~~lp~a-------------kVVkAFn~i~a~~l~~~~~~~ 146 (211)
T COG2085 81 RDALGGKIVIDAT-NPIEVNGEPGDLYLVPSEGSAAEIVAKLLPGA-------------KVVKAFNTIPAAVLADLAKPG 146 (211)
T ss_pred HHHhCCeEEEecC-CCccccCCccccccCCCCCcHHHHHHHHCCCc-------------chhhhhcccCHHHhccCCCcC
Confidence 5555699999988 7732 444333332 11111 22443 23333 11122222222221
Q ss_pred CCc-----cchhhhhHHHHHHHHHhcCCccC
Q 006894 598 LNE-----CGQTMCDIHQVWHASLRHGFRPL 623 (627)
Q Consensus 598 ~~e-----~G~iv~~i~~i~~aa~kHGF~p~ 623 (627)
.. ||+-.+-.+++.+++.+-||+|+
T Consensus 147 -~~~~v~vagDD~~Ak~~v~~L~~~iG~~~l 176 (211)
T COG2085 147 -GRRDVLVAGDDAEAKAVVAELAEDIGFRPL 176 (211)
T ss_pred -CceeEEEecCcHHHHHHHHHHHHhcCccee
Confidence 11 33324567889999999999993
No 296
>PLN02775 Probable dihydrodipicolinate reductase
Probab=86.59 E-value=1.2 Score=47.35 Aligned_cols=120 Identities=14% Similarity=0.092 Sum_probs=70.9
Q ss_pred CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe-cc-hhhhHHHHhhCchhhcccceeccchhhccHHHhcCCCCcEE
Q 006894 460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-IC-KDDYEKLKLRIPVEAQHNLVLSTSYAAHKTEQARAPKGTIF 537 (627)
Q Consensus 460 p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l-~~-~~~~~~l~~~~~~~~~~~lv~~~~~~~a~~e~~~a~~G~~~ 537 (627)
|+.+-+|.|.|++| |+|+++|+++.+++..+.= .+ ...=+++.-++... +..+...+++++++.+...-+++.++
T Consensus 8 ~~~~i~V~V~Ga~G--~MG~~~~~av~~~~~~Lv~~~~~~~~~~~~~~~~~g~-~v~~~~~~dl~~~l~~~~~~~~~~Vv 84 (286)
T PLN02775 8 PGSAIPIMVNGCTG--KMGHAVAEAAVSAGLQLVPVSFTGPAGVGVTVEVCGV-EVRLVGPSEREAVLSSVKAEYPNLIV 84 (286)
T ss_pred cCCCCeEEEECCCC--hHHHHHHHHHhcCCCEEEEEeccccccccccceeccc-eeeeecCccHHHHHHHhhccCCCEEE
Confidence 34556999999999 9999999999997776654 11 11111221121111 11211125676666665555788899
Q ss_pred eeCcCCCC-------c--CCCCCeeEeccCcccc-------CCCccccccccccccchhHHH
Q 006894 538 IPYTQIPP-------R--KLRKDCFYHSTPAMII-------PPSLSNMHSCENWLGRRVMSA 583 (627)
Q Consensus 538 ~~~sq~P~-------~--~~R~dc~~~~~p~~~~-------P~~~~~~~~~e~~~pr~~~~A 583 (627)
+||| .|. . +...++.+++|+--.- -++.-.+-+-||.+.--.+..
T Consensus 85 IDFT-~P~a~~~~~~~~~~~g~~~VvGTTG~~~e~l~~~~~~~~i~vv~apNfSiGv~ll~~ 145 (286)
T PLN02775 85 VDYT-LPDAVNDNAELYCKNGLPFVMGTTGGDRDRLLKDVEESGVYAVIAPQMGKQVVAFQA 145 (286)
T ss_pred EECC-ChHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHhcCCccEEEECcccHHHHHHHH
Confidence 9999 881 1 3446677776654310 123445566667776666665
No 297
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=86.52 E-value=0.79 Score=45.10 Aligned_cols=40 Identities=23% Similarity=0.327 Sum_probs=31.4
Q ss_pred EEEeccCCChhhHHHHHHHHhccCceEEe--cch-hhhHHHHhhC
Q 006894 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICK-DDYEKLKLRI 507 (627)
Q Consensus 466 V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~-~~~~~l~~~~ 507 (627)
|+++|++| -||+.+|+.|+++|.+|.+ |+. ++.+.+.+++
T Consensus 1 vlItG~~g--~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 43 (239)
T TIGR01830 1 ALVTGASR--GIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEEL 43 (239)
T ss_pred CEEECCCc--HHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH
Confidence 57899998 9999999999999999888 443 4555555444
No 298
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=86.52 E-value=1.2 Score=47.38 Aligned_cols=153 Identities=18% Similarity=0.201 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHHHHHHcCCcE--EEec-------ccccccccccCC---ceeEec-CCCcccc----------eeecCC-
Q 006894 393 EAINSLIEEAILEADAKGVKV--ISLG-------LLNQGEELNRNG---EIYLER-QPNKLKI----------KVVDGS- 448 (627)
Q Consensus 393 ~~in~~Ie~Ai~~A~~~G~kv--~~LG-------~ln~~e~ln~~g---~~~~~r-~p~~L~i----------rvv~Gn- 448 (627)
++-+.-+..-.+.|++.|++. +-|. .++..++||.|- ++.+.. -|++++. +=|||=
T Consensus 44 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D~~V~GIlvqlPlP~~id~~~i~~~I~p~KDVDGl~ 123 (284)
T PRK14193 44 PGSQAYVRGKHRDCAEVGITSIRRDLPADATQEELNAVIDELNADPACTGYIVQLPLPKHLDENAVLERIDPAKDADGLH 123 (284)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCcccCccCCC
Confidence 344555666777899999885 4454 233336677773 333332 1222331 224443
Q ss_pred ---------------hhHHHHHHhcC-----CCCCcEEEEeccCCChhhHHHHHHHHhc--cCceEEe-cchhhhHHHHh
Q 006894 449 ---------------SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQ--MGIKVAT-ICKDDYEKLKL 505 (627)
Q Consensus 449 ---------------sltaavv~~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~--~~~~v~l-~~~~~~~~l~~ 505 (627)
.-|+..|++=+ +-.-++|+++|.+. -||+-+|..|.+ ++..|++ .++-+ +|++
T Consensus 124 ~~n~g~l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrS~--~VGkPla~lL~~~~~~atVtvchs~T~--~l~~ 199 (284)
T PRK14193 124 PTNLGRLVLNEPAPLPCTPRGIVHLLRRYDVELAGAHVVVIGRGV--TVGRPIGLLLTRRSENATVTLCHTGTR--DLAA 199 (284)
T ss_pred hhhhhHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHhhccCCCEEEEeCCCCC--CHHH
Confidence 23666666543 44678999999998 999999999997 7999998 22211 1211
Q ss_pred hCchhhcccceeccchhhccHHHhcCCCCcEEeeCcCCCC--c-CCCCCee
Q 006894 506 RIPVEAQHNLVLSTSYAAHKTEQARAPKGTIFIPYTQIPP--R-KLRKDCF 553 (627)
Q Consensus 506 ~~~~~~~~~lv~~~~~~~a~~e~~~a~~G~~~~~~sq~P~--~-~~R~dc~ 553 (627)
. -++.++|-+.--.......++.++|++++|+. ... . ++..|+-
T Consensus 200 ~---~k~ADIvV~AvGkp~~i~~~~ik~GavVIDvG-in~~~~gkl~GDvd 246 (284)
T PRK14193 200 H---TRRADIIVAAAGVAHLVTADMVKPGAAVLDVG-VSRAGDGKLVGDVH 246 (284)
T ss_pred H---HHhCCEEEEecCCcCccCHHHcCCCCEEEEcc-ccccCCCcEEeecC
Confidence 1 12334433222222336789999999999998 443 1 3445554
No 299
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=86.47 E-value=1.1 Score=44.40 Aligned_cols=29 Identities=24% Similarity=0.366 Sum_probs=27.1
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
+.|+++|++| -||+++|+.|+++|.+|.+
T Consensus 3 k~vlItG~s~--~iG~~la~~l~~~g~~vi~ 31 (245)
T PRK12824 3 KIALVTGAKR--GIGSAIARELLNDGYRVIA 31 (245)
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHcCCEEEE
Confidence 5789999998 9999999999999999988
No 300
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=86.41 E-value=0.93 Score=45.70 Aligned_cols=32 Identities=25% Similarity=0.340 Sum_probs=27.6
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
.+.|+++|++|.+-||+++|+.|+++|.+|++
T Consensus 5 ~k~vlItGas~~~giG~~la~~l~~~G~~vi~ 36 (256)
T PRK12748 5 KKIALVTGASRLNGIGAAVCRRLAAKGIDIFF 36 (256)
T ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEE
Confidence 36799999994236999999999999999988
No 301
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=86.29 E-value=0.77 Score=48.72 Aligned_cols=141 Identities=20% Similarity=0.236 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeEec-CCCccc----------ceeecCCh
Q 006894 393 EAINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLER-QPNKLK----------IKVVDGSS 449 (627)
Q Consensus 393 ~~in~~Ie~Ai~~A~~~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~r-~p~~L~----------irvv~Gns 449 (627)
++-+.-++.-.+.|++.|+++.- |. .++..+++|.|. ++.+.. -|++++ .+=|||=+
T Consensus 42 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~ 121 (282)
T PRK14169 42 PASEVYVRNKQRRAEDIGVRSLMFRLPEATTQADLLAKVAELNHDPDVDAILVQLPLPAGLDEQAVIDAIDPDKDVDGFS 121 (282)
T ss_pred hhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhhcCcccCcccCC
Confidence 33445556666778888887643 43 233335677754 333331 122232 12244433
Q ss_pred ----------------hHHHHHHhcC-----CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe-c-chhhhHHHHhh
Q 006894 450 ----------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-I-CKDDYEKLKLR 506 (627)
Q Consensus 450 ----------------ltaavv~~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l-~-~~~~~~~l~~~ 506 (627)
-|+..|++=+ +-.-++|+++|... -||+-+|..|.++|..|++ . ....+++.
T Consensus 122 ~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~atVtichs~T~~l~~~--- 196 (282)
T PRK14169 122 PVSVGRLWANEPTVVASTPYGIMALLDAYDIDVAGKRVVIVGRSN--IVGRPLAGLMVNHDATVTIAHSKTRNLKQL--- 196 (282)
T ss_pred hhhhHHHhcCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEECCCCCCHHHH---
Confidence 3666665544 44678999999998 9999999999999999999 2 22223221
Q ss_pred CchhhcccceeccchhhccHHHhcCCCCcEEeeCc
Q 006894 507 IPVEAQHNLVLSTSYAAHKTEQARAPKGTIFIPYT 541 (627)
Q Consensus 507 ~~~~~~~~lv~~~~~~~a~~e~~~a~~G~~~~~~s 541 (627)
-++.++|-+.--.......++.++|++++|+.
T Consensus 197 ---~~~ADIvI~AvG~p~~i~~~~vk~GavVIDvG 228 (282)
T PRK14169 197 ---TKEADILVVAVGVPHFIGADAVKPGAVVIDVG 228 (282)
T ss_pred ---HhhCCEEEEccCCcCccCHHHcCCCcEEEEee
Confidence 12234432222222236678999999999998
No 302
>PRK08324 short chain dehydrogenase; Validated
Probab=86.25 E-value=1 Score=52.99 Aligned_cols=45 Identities=18% Similarity=0.177 Sum_probs=38.8
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 509 (627)
.+.|+++|++| -||+++|+.|+++|.+|.+ |+.++.+++.+++..
T Consensus 422 gk~vLVTGasg--gIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~ 468 (681)
T PRK08324 422 GKVALVTGAAG--GIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGG 468 (681)
T ss_pred CCEEEEecCCC--HHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhc
Confidence 47899999998 9999999999999999988 888888877766543
No 303
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=86.20 E-value=1.5 Score=47.39 Aligned_cols=77 Identities=17% Similarity=0.126 Sum_probs=50.6
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe---cchhhhHHHH---hhCchhhcccceecc-chhhccHHHhcCCCCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLK---LRIPVEAQHNLVLST-SYAAHKTEQARAPKGT 535 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~---~~~~~~~~~~lv~~~-~~~~a~~e~~~a~~G~ 535 (627)
..+|+|+|+.| =||+.++..|-++|..|+. .+...+++|+ +-..+..+..+++.. +-++++.+..+.-++.
T Consensus 2 ~~~VLVtGgaG--yiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd 79 (343)
T KOG1371|consen 2 GKHVLVTGGAG--YIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFD 79 (343)
T ss_pred CcEEEEecCCc--ceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCc
Confidence 46899999999 9999999999999999999 3333355555 334433322222222 3445566666666677
Q ss_pred EEeeCc
Q 006894 536 IFIPYT 541 (627)
Q Consensus 536 ~~~~~s 541 (627)
.++-|+
T Consensus 80 ~V~Hfa 85 (343)
T KOG1371|consen 80 AVMHFA 85 (343)
T ss_pred eEEeeh
Confidence 766554
No 304
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=86.15 E-value=0.77 Score=48.78 Aligned_cols=84 Identities=12% Similarity=0.128 Sum_probs=57.8
Q ss_pred hHHHHHHhcC-----CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe-c-chhhhHHHHhhCchhhcccceeccchh
Q 006894 450 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-I-CKDDYEKLKLRIPVEAQHNLVLSTSYA 522 (627)
Q Consensus 450 ltaavv~~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l-~-~~~~~~~l~~~~~~~~~~~lv~~~~~~ 522 (627)
-|++.|++=+ +-.-++|+++|.+. -||+-+|..|.++|..|++ . ..+.+++. -++.++|-+.--.
T Consensus 141 cTp~avi~ll~~y~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~atVt~chs~T~~l~~~------~~~ADIvIsAvGk 212 (284)
T PRK14177 141 CTPYGMVLLLKEYGIDVTGKNAVVVGRSP--ILGKPMAMLLTEMNATVTLCHSKTQNLPSI------VRQADIIVGAVGK 212 (284)
T ss_pred CCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCCCCHHHH------HhhCCEEEEeCCC
Confidence 3666665544 44678999999998 9999999999999999999 2 22223221 1333443222222
Q ss_pred hccHHHhcCCCCcEEeeCc
Q 006894 523 AHKTEQARAPKGTIFIPYT 541 (627)
Q Consensus 523 ~a~~e~~~a~~G~~~~~~s 541 (627)
+.....++.++|++++|+.
T Consensus 213 ~~~i~~~~ik~gavVIDvG 231 (284)
T PRK14177 213 PEFIKADWISEGAVLLDAG 231 (284)
T ss_pred cCccCHHHcCCCCEEEEec
Confidence 2236688999999999998
No 305
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=86.15 E-value=0.82 Score=48.87 Aligned_cols=85 Identities=14% Similarity=0.178 Sum_probs=57.6
Q ss_pred hHHHHHHhcC-----CCCCcEEEEeccCCChhhHHHHHHHHhcc----CceEEe-cchhhhHHHHhhCchhhcccceecc
Q 006894 450 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-ICKDDYEKLKLRIPVEAQHNLVLST 519 (627)
Q Consensus 450 ltaavv~~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~----~~~v~l-~~~~~~~~l~~~~~~~~~~~lv~~~ 519 (627)
-|++.|++=+ +-.-++|+++|.+. -||+-+|..|.++ +..|++ .++- .+|++. -++.++|-+.
T Consensus 143 cTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~~~~~atVtv~hs~T--~~l~~~---~~~ADIvVsA 215 (297)
T PRK14168 143 CTPAGIQEMLVRSGVETSGAEVVVVGRSN--IVGKPIANMMTQKGPGANATVTIVHTRS--KNLARH---CQRADILIVA 215 (297)
T ss_pred CCHHHHHHHHHHhCCCCCCCEEEEECCCC--cccHHHHHHHHhcccCCCCEEEEecCCC--cCHHHH---HhhCCEEEEe
Confidence 4666666543 44678999999998 9999999999988 788988 2221 112211 1333444332
Q ss_pred chhhccHHHhcCCCCcEEeeCc
Q 006894 520 SYAAHKTEQARAPKGTIFIPYT 541 (627)
Q Consensus 520 ~~~~a~~e~~~a~~G~~~~~~s 541 (627)
.=.......++.++|++++|+.
T Consensus 216 vGkp~~i~~~~ik~gavVIDvG 237 (297)
T PRK14168 216 AGVPNLVKPEWIKPGATVIDVG 237 (297)
T ss_pred cCCcCccCHHHcCCCCEEEecC
Confidence 2333347789999999999997
No 306
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=86.10 E-value=1.3 Score=47.23 Aligned_cols=140 Identities=15% Similarity=0.203 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEec---------ccccccccccCC---ceeEecC-CCcccc------------------
Q 006894 394 AINSLIEEAILEADAKGVKVISLG---------LLNQGEELNRNG---EIYLERQ-PNKLKI------------------ 442 (627)
Q Consensus 394 ~in~~Ie~Ai~~A~~~G~kv~~LG---------~ln~~e~ln~~g---~~~~~r~-p~~L~i------------------ 442 (627)
+-+.-+....+.|++.|++..-.= ++...++||.|- ++.+..= |.+++.
T Consensus 39 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~d~~V~GIlvqlPlP~~i~~~~i~~~I~p~KDVDGl~p 118 (287)
T PRK14181 39 ASEVYVGMKVKKATDLGMVSKAHRLPSDATLSDILKLIHRLNNDPNIHGILVQLPLPKHLDAQAILQAISPDKDVDGLHP 118 (287)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCcCHHHHHhccCcccCcccCCh
Confidence 344556667778888888765432 234446677664 3333311 222221
Q ss_pred ----eeecCC-----hhHHHHHHhc-----CCCCCcEEEEeccCCChhhHHHHHHHHhcc----CceEEe-cc-hhhhHH
Q 006894 443 ----KVVDGS-----SLAAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-IC-KDDYEK 502 (627)
Q Consensus 443 ----rvv~Gn-----sltaavv~~~-----ip~~~~~V~l~Gatg~~kig~ava~~L~~~----~~~v~l-~~-~~~~~~ 502 (627)
|+..|+ .-|+..|++= |+-.-++|+++|... -||+-+|..|.++ +..|++ .+ ...+++
T Consensus 119 ~n~g~l~~g~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~~~~~AtVtvchs~T~~l~~ 196 (287)
T PRK14181 119 VNMGKLLLGETDGFIPCTPAGIIELLKYYEIPLHGRHVAIVGRSN--IVGKPLAALLMQKHPDTNATVTLLHSQSENLTE 196 (287)
T ss_pred hhHHHHhcCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHhCcCCCCCEEEEeCCCCCCHHH
Confidence 233343 2366666653 455688999999998 9999999999988 889999 22 222222
Q ss_pred HHhhCchhhcccceeccchhhccHHHhcCCCCcEEeeCc
Q 006894 503 LKLRIPVEAQHNLVLSTSYAAHKTEQARAPKGTIFIPYT 541 (627)
Q Consensus 503 l~~~~~~~~~~~lv~~~~~~~a~~e~~~a~~G~~~~~~s 541 (627)
. -++.++|-+.--.+.....++.++|++++|+.
T Consensus 197 ---~---~~~ADIvV~AvG~p~~i~~~~ik~GavVIDvG 229 (287)
T PRK14181 197 ---I---LKTADIIIAAIGVPLFIKEEMIAEKAVIVDVG 229 (287)
T ss_pred ---H---HhhCCEEEEccCCcCccCHHHcCCCCEEEEec
Confidence 1 12333433222222336789999999999987
No 307
>PRK08655 prephenate dehydrogenase; Provisional
Probab=85.88 E-value=1.7 Score=48.64 Aligned_cols=75 Identities=15% Similarity=0.205 Sum_probs=50.1
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch----h-----hccccee-ccc---hhhccHH-H
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV----E-----AQHNLVL-STS---YAAHKTE-Q 528 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~----~-----~~~~lv~-~~~---~~~a~~e-~ 528 (627)
+|.++|++| .+|+++|+.|.+.|.+|.+ |++++.+++..+... + .+.++|. .+. ..+...+ .
T Consensus 2 kI~IIGG~G--~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~~~~~~e~~~~aDvVIlavp~~~~~~vl~~l~ 79 (437)
T PRK08655 2 KISIIGGTG--GLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEYANDNIDAAKDADIVIISVPINVTEDVIKEVA 79 (437)
T ss_pred EEEEEecCC--HHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCeeccCHHHHhccCCEEEEecCHHHHHHHHHHHH
Confidence 589999999 9999999999999999888 777766555544221 1 1234442 222 1111122 3
Q ss_pred hcCCCCcEEeeCc
Q 006894 529 ARAPKGTIFIPYT 541 (627)
Q Consensus 529 ~~a~~G~~~~~~s 541 (627)
..+++|++++|++
T Consensus 80 ~~l~~~~iViDvs 92 (437)
T PRK08655 80 PHVKEGSLLMDVT 92 (437)
T ss_pred hhCCCCCEEEEcc
Confidence 4678999999998
No 308
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=85.87 E-value=1.3 Score=47.08 Aligned_cols=97 Identities=14% Similarity=0.149 Sum_probs=62.6
Q ss_pred hhHHHHHHhcC-----CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe-cc-hhhhHHHHhhCchhhcccceeccch
Q 006894 449 SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-IC-KDDYEKLKLRIPVEAQHNLVLSTSY 521 (627)
Q Consensus 449 sltaavv~~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l-~~-~~~~~~l~~~~~~~~~~~lv~~~~~ 521 (627)
.-|++.|++=+ +-.-++|+++|... -||+-+|..|.++|..|++ .+ ...+.+. -++.++|-+.-=
T Consensus 140 PcTp~av~~lL~~y~i~l~GK~vvViGrS~--iVGkPla~lL~~~~ATVtichs~T~~L~~~------~~~ADIvV~AvG 211 (288)
T PRK14171 140 PCTALGCLAVIKKYEPNLTGKNVVIIGRSN--IVGKPLSALLLKENCSVTICHSKTHNLSSI------TSKADIVVAAIG 211 (288)
T ss_pred CCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCCCCHHHH------HhhCCEEEEccC
Confidence 34666665543 44678999999998 9999999999999999998 22 2222221 122334322222
Q ss_pred hhccHHHhcCCCCcEEeeCcCCCC--c-CCCCCeeE
Q 006894 522 AAHKTEQARAPKGTIFIPYTQIPP--R-KLRKDCFY 554 (627)
Q Consensus 522 ~~a~~e~~~a~~G~~~~~~sq~P~--~-~~R~dc~~ 554 (627)
.......++.++|++++|+. .-. . ++..|+-+
T Consensus 212 kp~~i~~~~vk~GavVIDvG-in~~~~gkl~GDVd~ 246 (288)
T PRK14171 212 SPLKLTAEYFNPESIVIDVG-INRISGNKIIGDVDF 246 (288)
T ss_pred CCCccCHHHcCCCCEEEEee-ccccCCCCeECCccH
Confidence 22336789999999999988 322 1 34466554
No 309
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=85.80 E-value=1.3 Score=46.72 Aligned_cols=61 Identities=18% Similarity=0.159 Sum_probs=45.7
Q ss_pred ecCChhHHHHHHhcC--CCCCcEEEEeccCCChhhHHHHHHHHhccCc-eEEe--cchhhhHHHHhhCc
Q 006894 445 VDGSSLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 445 v~Gnsltaavv~~~i--p~~~~~V~l~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~ 508 (627)
|||.-+..+.--..+ +...++|+|+||- -.|+|++.+|.+.|+ ++++ |+.+|-++|.+++.
T Consensus 105 TD~~G~~~~l~~~~~~~~~~~k~vlvlGaG---Gaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~ 170 (282)
T TIGR01809 105 TDWDGIAGALANIGKFEPLAGFRGLVIGAG---GTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGV 170 (282)
T ss_pred CCHHHHHHHHHhhCCccccCCceEEEEcCc---HHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhh
Confidence 677777766643332 2245689999997 579999999999887 5777 99999999887643
No 310
>PLN02214 cinnamoyl-CoA reductase
Probab=85.77 E-value=0.95 Score=48.39 Aligned_cols=35 Identities=23% Similarity=0.209 Sum_probs=30.4
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhh
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~ 499 (627)
.++|+|+|++| -||+++++.|.++|.+|.. |+.++
T Consensus 10 ~~~vlVTGatG--fIG~~l~~~L~~~G~~V~~~~r~~~~ 46 (342)
T PLN02214 10 GKTVCVTGAGG--YIASWIVKILLERGYTVKGTVRNPDD 46 (342)
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHCcCEEEEEeCCchh
Confidence 45799999999 9999999999999999877 65553
No 311
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=85.74 E-value=1.4 Score=50.66 Aligned_cols=43 Identities=14% Similarity=0.137 Sum_probs=37.1
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
..++|+++|+ | -+|+|+|..|.++|.+|.+ |+.++.+++.+++
T Consensus 378 ~~k~vlIlGa-G--GagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l 422 (529)
T PLN02520 378 AGKLFVVIGA-G--GAGKALAYGAKEKGARVVIANRTYERAKELADAV 422 (529)
T ss_pred CCCEEEEECC-c--HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence 4578999999 5 7899999999999999888 8888888887765
No 312
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=85.69 E-value=0.88 Score=48.63 Aligned_cols=140 Identities=16% Similarity=0.183 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeEec-CCCccc----------ceeecCCh-
Q 006894 394 AINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLER-QPNKLK----------IKVVDGSS- 449 (627)
Q Consensus 394 ~in~~Ie~Ai~~A~~~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~r-~p~~L~----------irvv~Gns- 449 (627)
+-+.-+...++.|++.|++.. -|- +++..+++|.|- ++.+.. -|++++ .+=|||=+
T Consensus 45 as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~ 124 (297)
T PRK14186 45 ASAVYVRNKEKACARVGIASFGKHLPADTSQAEVEALIAQLNQDERVDGILLQLPLPKHLDEVPLLHAIDPDKDADGLHP 124 (297)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCCh
Confidence 445556667778888888774 443 222235567654 333331 122232 12244432
Q ss_pred ---------------hHHHHHHhcC-----CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe-cch-hhhHHHHhhC
Q 006894 450 ---------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICK-DDYEKLKLRI 507 (627)
Q Consensus 450 ---------------ltaavv~~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l-~~~-~~~~~l~~~~ 507 (627)
-|+..|++=+ +-.-++|+++|.+. -||+-+|..|.++|..|++ .++ ..+++.
T Consensus 125 ~n~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~--iVGkPla~lL~~~~atVtv~hs~T~~l~~~---- 198 (297)
T PRK14186 125 LNLGRLVKGEPGLRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSI--LVGKPLALMLLAANATVTIAHSRTQDLASI---- 198 (297)
T ss_pred hhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEeCCCCCCHHHH----
Confidence 3566665544 44578999999998 9999999999999999999 222 223221
Q ss_pred chhhcccceeccchhhccHHHhcCCCCcEEeeCc
Q 006894 508 PVEAQHNLVLSTSYAAHKTEQARAPKGTIFIPYT 541 (627)
Q Consensus 508 ~~~~~~~lv~~~~~~~a~~e~~~a~~G~~~~~~s 541 (627)
-++.++|-+.--.+.....++.++|++++|+.
T Consensus 199 --~~~ADIvIsAvGkp~~i~~~~ik~gavVIDvG 230 (297)
T PRK14186 199 --TREADILVAAAGRPNLIGAEMVKPGAVVVDVG 230 (297)
T ss_pred --HhhCCEEEEccCCcCccCHHHcCCCCEEEEec
Confidence 12334432222222336788999999999987
No 313
>PLN00015 protochlorophyllide reductase
Probab=85.66 E-value=0.86 Score=47.84 Aligned_cols=40 Identities=18% Similarity=0.140 Sum_probs=34.7
Q ss_pred EEeccCCChhhHHHHHHHHhccC-ceEEe--cchhhhHHHHhhCc
Q 006894 467 LLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 467 ~l~Gatg~~kig~ava~~L~~~~-~~v~l--~~~~~~~~l~~~~~ 508 (627)
+++|+++ -||+++|+.|+++| .+|.+ |+.++.+++.+++.
T Consensus 1 lITGas~--GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~ 43 (308)
T PLN00015 1 IITGASS--GLGLATAKALAETGKWHVVMACRDFLKAERAAKSAG 43 (308)
T ss_pred CEeCCCC--hHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhc
Confidence 4789997 99999999999999 89888 88888887777664
No 314
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=85.65 E-value=0.84 Score=49.21 Aligned_cols=119 Identities=13% Similarity=0.202 Sum_probs=63.2
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceE---E-e-cchhhhHHHH---hh-----Cchh--hccccee-cc-chhhccHH
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKV---A-T-ICKDDYEKLK---LR-----IPVE--AQHNLVL-ST-SYAAHKTE 527 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v---~-l-~~~~~~~~l~---~~-----~~~~--~~~~lv~-~~-~~~~a~~e 527 (627)
+|+++|||| .+|+.+++.|.+++..+ . + ++++.=+.+. .+ +... .+.++|. .+ +...++..
T Consensus 3 ~V~IvGAtG--~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~~~~~~vDvVf~A~g~g~s~~~~ 80 (334)
T PRK14874 3 NVAVVGATG--AVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVEDLTTFDFSGVDIALFSAGGSVSKKYA 80 (334)
T ss_pred EEEEECCCC--HHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEeeCCHHHHcCCCEEEECCChHHHHHHH
Confidence 799999999 99999999999865432 2 2 3322211111 00 0000 1234442 22 23333344
Q ss_pred HhcCCCCcEEeeCcCCCCc-CCCCCeeEeccCccccCCCc-cccccccccccchhHH-H-HHHhHHHhhhcCCC
Q 006894 528 QARAPKGTIFIPYTQIPPR-KLRKDCFYHSTPAMIIPPSL-SNMHSCENWLGRRVMS-A-WRIAGIIHALEGWD 597 (627)
Q Consensus 528 ~~~a~~G~~~~~~sq~P~~-~~R~dc~~~~~p~~~~P~~~-~~~~~~e~~~pr~~~~-A-c~a~~~~~alEg~~ 597 (627)
++.+..|+.++|.| .. .+++|+.| .+|+-- +.+. ...-++.++ + |.+-+++++|--..
T Consensus 81 ~~~~~~G~~VIDlS---~~~R~~~~~p~------~lpevn~~~i~---~~~~~~iVanp~C~~t~~~l~l~pL~ 142 (334)
T PRK14874 81 PKAAAAGAVVIDNS---SAFRMDPDVPL------VVPEVNPEALA---EHRKKGIIANPNCSTIQMVVALKPLH 142 (334)
T ss_pred HHHHhCCCEEEECC---chhhcCCCCCe------EcCCcCHHHHh---hhhcCCeEECccHHHHHHHHHHHHHH
Confidence 55567899999998 33 44456554 234310 0010 100013333 3 99999998776554
No 315
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=85.63 E-value=0.94 Score=48.48 Aligned_cols=84 Identities=15% Similarity=0.172 Sum_probs=57.8
Q ss_pred hHHHHHHhcC-----CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe-cch-hhhHHHHhhCchhhcccceeccchh
Q 006894 450 LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICK-DDYEKLKLRIPVEAQHNLVLSTSYA 522 (627)
Q Consensus 450 ltaavv~~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l-~~~-~~~~~l~~~~~~~~~~~lv~~~~~~ 522 (627)
-|++.|++=+ +-.-++|+++|.+. -||+-+|..|.++|..|++ .++ ..+++. + ++.++|-+.--.
T Consensus 149 cTp~avi~lL~~~~i~l~Gk~vvVIGRS~--iVGkPla~lL~~~~ATVtvchs~T~nl~~~---~---~~ADIvv~AvGk 220 (299)
T PLN02516 149 CTPKGCLELLSRSGIPIKGKKAVVVGRSN--IVGLPVSLLLLKADATVTVVHSRTPDPESI---V---READIVIAAAGQ 220 (299)
T ss_pred CCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEeCCCCCCHHHH---H---hhCCEEEEcCCC
Confidence 4666666544 44678999999998 9999999999999999999 222 222221 1 233443222222
Q ss_pred hccHHHhcCCCCcEEeeCc
Q 006894 523 AHKTEQARAPKGTIFIPYT 541 (627)
Q Consensus 523 ~a~~e~~~a~~G~~~~~~s 541 (627)
+.....++.++|++++|+.
T Consensus 221 ~~~i~~~~vk~gavVIDvG 239 (299)
T PLN02516 221 AMMIKGDWIKPGAAVIDVG 239 (299)
T ss_pred cCccCHHHcCCCCEEEEee
Confidence 3346789999999999987
No 316
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=85.50 E-value=0.9 Score=44.94 Aligned_cols=30 Identities=27% Similarity=0.346 Sum_probs=27.6
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
.+.++++|++| -||+++|+.|+++|.+|.+
T Consensus 5 ~k~~lVtGas~--~iG~~ia~~l~~~G~~v~~ 34 (235)
T PRK06550 5 TKTVLITGAAS--GIGLAQARAFLAQGAQVYG 34 (235)
T ss_pred CCEEEEcCCCc--hHHHHHHHHHHHCCCEEEE
Confidence 46799999998 9999999999999999888
No 317
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=85.44 E-value=0.95 Score=48.04 Aligned_cols=153 Identities=18% Similarity=0.237 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeEec-CCCcccc-----------------
Q 006894 393 EAINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLER-QPNKLKI----------------- 442 (627)
Q Consensus 393 ~~in~~Ie~Ai~~A~~~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~r-~p~~L~i----------------- 442 (627)
.+-+.-+..-.+.|++.|++.. -|. .++..++||.|- ++.++. -|++++.
T Consensus 42 ~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~ 121 (282)
T PRK14166 42 PASQTYVKSKAKACEECGIKSLVYHLNENTTQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGFH 121 (282)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCC
Confidence 3445555666678888888743 343 223335677763 333331 1222221
Q ss_pred -----eeecC-C----hhHHHHHHhcC-----CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHh
Q 006894 443 -----KVVDG-S----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (627)
Q Consensus 443 -----rvv~G-n----sltaavv~~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 505 (627)
|+..| + .-|++.|++=+ +-.-++|+++|... -||+-+|.+|.++|..|++ +..+.+++.
T Consensus 122 ~~N~g~l~~g~~~~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~--iVGkPla~lL~~~~atVt~chs~T~nl~~~-- 197 (282)
T PRK14166 122 PINVGYLNLGLESGFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASN--IVGRPMATMLLNAGATVSVCHIKTKDLSLY-- 197 (282)
T ss_pred hhhhHHHhcCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHHCCCEEEEeCCCCCCHHHH--
Confidence 22233 1 34666665544 44678999999998 9999999999999999998 222223221
Q ss_pred hCchhhcccceeccchhhccHHHhcCCCCcEEeeCcCCCC--c-CCCCCeeE
Q 006894 506 RIPVEAQHNLVLSTSYAAHKTEQARAPKGTIFIPYTQIPP--R-KLRKDCFY 554 (627)
Q Consensus 506 ~~~~~~~~~lv~~~~~~~a~~e~~~a~~G~~~~~~sq~P~--~-~~R~dc~~ 554 (627)
-++.++|-+.--........+.++|++++|+. .-. . ++-.||-+
T Consensus 198 ----~~~ADIvIsAvGkp~~i~~~~vk~GavVIDvG-in~~~~gkl~GDVd~ 244 (282)
T PRK14166 198 ----TRQADLIIVAAGCVNLLRSDMVKEGVIVVDVG-INRLESGKIVGDVDF 244 (282)
T ss_pred ----HhhCCEEEEcCCCcCccCHHHcCCCCEEEEec-ccccCCCCeeCCCCH
Confidence 12333432222222236678999999999998 322 1 44466654
No 318
>PLN02427 UDP-apiose/xylose synthase
Probab=85.40 E-value=1 Score=48.74 Aligned_cols=42 Identities=14% Similarity=0.184 Sum_probs=32.7
Q ss_pred CCCCCcEEEEeccCCChhhHHHHHHHHhcc-CceEEe--cchhhhHH
Q 006894 459 LPKTTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEK 502 (627)
Q Consensus 459 ip~~~~~V~l~Gatg~~kig~ava~~L~~~-~~~v~l--~~~~~~~~ 502 (627)
-|-...+|+|+|+|| =||+.+++.|.++ |.+|.. |+.++.+.
T Consensus 10 ~~~~~~~VlVTGgtG--fIGs~lv~~L~~~~g~~V~~l~r~~~~~~~ 54 (386)
T PLN02427 10 KPIKPLTICMIGAGG--FIGSHLCEKLMTETPHKVLALDVYNDKIKH 54 (386)
T ss_pred CcccCcEEEEECCcc--hHHHHHHHHHHhcCCCEEEEEecCchhhhh
Confidence 344566899999999 9999999999987 588876 55544443
No 319
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=85.34 E-value=1.4 Score=48.70 Aligned_cols=45 Identities=18% Similarity=0.303 Sum_probs=36.1
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--c--chhhhHHHHhhCc
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--I--CKDDYEKLKLRIP 508 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~--~~~~~~~l~~~~~ 508 (627)
..+.|+++|++| -||+++|+.|+++|.+|++ + +.++++++.+++.
T Consensus 209 ~g~~vlItGasg--gIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~ 257 (450)
T PRK08261 209 AGKVALVTGAAR--GIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVG 257 (450)
T ss_pred CCCEEEEecCCC--HHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcC
Confidence 456899999998 9999999999999999988 3 3455666665543
No 320
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=85.20 E-value=1.1 Score=44.72 Aligned_cols=30 Identities=27% Similarity=0.353 Sum_probs=28.1
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
.+.|+++|++| -||+++|+.|+++|.+|.+
T Consensus 8 ~k~vlItGas~--~iG~~la~~l~~~G~~v~~ 37 (252)
T PRK08220 8 GKTVWVTGAAQ--GIGYAVALAFVEAGAKVIG 37 (252)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCCEEEE
Confidence 46899999998 9999999999999999988
No 321
>PRK12367 short chain dehydrogenase; Provisional
Probab=85.03 E-value=1.2 Score=45.62 Aligned_cols=33 Identities=18% Similarity=0.244 Sum_probs=29.4
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cch
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICK 497 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~ 497 (627)
.+.|+++|++| -||+++|+.|+++|.+|.+ |++
T Consensus 14 ~k~~lITGas~--gIG~ala~~l~~~G~~Vi~~~r~~ 48 (245)
T PRK12367 14 GKRIGITGASG--ALGKALTKAFRAKGAKVIGLTHSK 48 (245)
T ss_pred CCEEEEEcCCc--HHHHHHHHHHHHCCCEEEEEECCc
Confidence 46899999998 9999999999999999987 554
No 322
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=85.02 E-value=0.72 Score=46.95 Aligned_cols=32 Identities=19% Similarity=0.279 Sum_probs=28.2
Q ss_pred EEEeccCCChhhHHHHHHHHhccCceEEe--cchhh
Q 006894 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (627)
Q Consensus 466 V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~ 499 (627)
|+++|+|| -||+.+++.|.++|.+|.. |+.++
T Consensus 1 vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~ 34 (292)
T TIGR01777 1 ILITGGTG--FIGRALTQRLTKDGHEVTILTRSPPA 34 (292)
T ss_pred CEEEcccc--hhhHHHHHHHHHcCCEEEEEeCCCCC
Confidence 68999999 9999999999999999887 65554
No 323
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=85.00 E-value=1 Score=45.15 Aligned_cols=39 Identities=21% Similarity=0.307 Sum_probs=29.2
Q ss_pred ccCCChhhHHHHHHHHhccCceEEe--cchhh----hHHHHhhCc
Q 006894 470 GTVTANKVANAVASSLCQMGIKVAT--ICKDD----YEKLKLRIP 508 (627)
Q Consensus 470 Gatg~~kig~ava~~L~~~~~~v~l--~~~~~----~~~l~~~~~ 508 (627)
|++..+-||++||+.|+++|.+|++ |++++ ++++.++.+
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~ 45 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG 45 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC
Confidence 4552138999999999999999999 88887 444544444
No 324
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=84.56 E-value=0.93 Score=49.63 Aligned_cols=142 Identities=11% Similarity=0.137 Sum_probs=86.7
Q ss_pred hHHHHHHHHHHHHHHHHcCCcEEEe--cccc-------cccccccCC---ceeEec-CCCcccc----------------
Q 006894 392 REAINSLIEEAILEADAKGVKVISL--GLLN-------QGEELNRNG---EIYLER-QPNKLKI---------------- 442 (627)
Q Consensus 392 ~~~in~~Ie~Ai~~A~~~G~kv~~L--G~ln-------~~e~ln~~g---~~~~~r-~p~~L~i---------------- 442 (627)
..+-+.-+...++.|++.|++..-. -.-. ..++||.|- ++.++. -|++++.
T Consensus 114 dpaS~~Yv~~k~K~~e~~GI~~~~~~lpe~~te~ell~~I~~LN~D~~V~GIlVQlPLP~~id~~~i~~aI~P~KDVDGl 193 (364)
T PLN02616 114 RKDSATYVRNKKKACDSVGINSFEVRLPEDSTEQEVLKFISGFNNDPSVHGILVQLPLPSHMDEQNILNAVSIEKDVDGF 193 (364)
T ss_pred ChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccC
Confidence 3344555667778899999975433 2221 225677764 333331 1332331
Q ss_pred ------eeecC--C----hhHHHHHHhcC-----CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe-cc-hhhhHHH
Q 006894 443 ------KVVDG--S----SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-IC-KDDYEKL 503 (627)
Q Consensus 443 ------rvv~G--n----sltaavv~~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l-~~-~~~~~~l 503 (627)
|+..| + .-|++.|++=+ +-.-++|+|+|... -||+-+|..|-++|..|++ .+ ...+++.
T Consensus 194 ~p~N~G~L~~g~~~~~f~PCTp~avielL~~y~i~l~GK~vvVIGRS~--iVGkPLa~LL~~~~ATVTicHs~T~nl~~~ 271 (364)
T PLN02616 194 HPLNIGRLAMRGREPLFVPCTPKGCIELLHRYNVEIKGKRAVVIGRSN--IVGMPAALLLQREDATVSIVHSRTKNPEEI 271 (364)
T ss_pred ChhhhHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cccHHHHHHHHHCCCeEEEeCCCCCCHHHH
Confidence 23333 2 34666666654 44678999999998 9999999999999999999 22 2222222
Q ss_pred HhhCchhhcccceeccchhhccHHHhcCCCCcEEeeCc
Q 006894 504 KLRIPVEAQHNLVLSTSYAAHKTEQARAPKGTIFIPYT 541 (627)
Q Consensus 504 ~~~~~~~~~~~lv~~~~~~~a~~e~~~a~~G~~~~~~s 541 (627)
-++.++|-+---.......++.++|+++||+-
T Consensus 272 ------~r~ADIVIsAvGkp~~i~~d~vK~GAvVIDVG 303 (364)
T PLN02616 272 ------TREADIIISAVGQPNMVRGSWIKPGAVVIDVG 303 (364)
T ss_pred ------HhhCCEEEEcCCCcCcCCHHHcCCCCEEEecc
Confidence 13334432222222336789999999999987
No 325
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=84.56 E-value=2.1 Score=45.62 Aligned_cols=141 Identities=18% Similarity=0.174 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeEec-CCCcccc----------eeecCC--
Q 006894 394 AINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLER-QPNKLKI----------KVVDGS-- 448 (627)
Q Consensus 394 ~in~~Ie~Ai~~A~~~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~r-~p~~L~i----------rvv~Gn-- 448 (627)
+-+.-++.-++.|++.|++..- |. .++..++||.|- ++.++. -|++++. +=|||=
T Consensus 44 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~ 123 (286)
T PRK14184 44 ASQVYVRNKERACEDAGIVSEAFRLPADTTQEELEDLIAELNARPDIDGILLQLPLPKGLDSQRCLELIDPAKDVDGFHP 123 (286)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCcCceEEEecCCCCCCCHHHHHhccCcccCcccCCH
Confidence 3444466667788888887654 33 233336677764 333331 1333431 112332
Q ss_pred --------------hhHHHHHHhc-----CCCCCcEEEEeccCCChhhHHHHHHHHhc----cCceEEe-cchhhhHHHH
Q 006894 449 --------------SLAAAVVVNS-----LPKTTAHVLLRGTVTANKVANAVASSLCQ----MGIKVAT-ICKDDYEKLK 504 (627)
Q Consensus 449 --------------sltaavv~~~-----ip~~~~~V~l~Gatg~~kig~ava~~L~~----~~~~v~l-~~~~~~~~l~ 504 (627)
.-|++.|++= |+-.-++|+++|... -||+-++.+|.+ +|..|++ .++. .+|+
T Consensus 124 ~N~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~--iVG~Pla~lL~~~~~~~~AtVt~~hs~t--~~l~ 199 (286)
T PRK14184 124 ENMGRLALGLPGFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSN--IVGKPLALMLGAPGKFANATVTVCHSRT--PDLA 199 (286)
T ss_pred hhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHhCCcccCCCEEEEEeCCc--hhHH
Confidence 2366666653 455678999999998 999999999998 8889988 2222 1222
Q ss_pred hhCchhhcccceeccchhhccHHHhcCCCCcEEeeCc
Q 006894 505 LRIPVEAQHNLVLSTSYAAHKTEQARAPKGTIFIPYT 541 (627)
Q Consensus 505 ~~~~~~~~~~lv~~~~~~~a~~e~~~a~~G~~~~~~s 541 (627)
+.+ ++.++|-+.--.......++.++|++++|+.
T Consensus 200 ~~~---~~ADIVI~AvG~p~li~~~~vk~GavVIDVG 233 (286)
T PRK14184 200 EEC---READFLFVAIGRPRFVTADMVKPGAVVVDVG 233 (286)
T ss_pred HHH---HhCCEEEEecCCCCcCCHHHcCCCCEEEEee
Confidence 221 2233332222112225568889999999998
No 326
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=84.46 E-value=1.6 Score=43.56 Aligned_cols=45 Identities=22% Similarity=0.343 Sum_probs=34.0
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhh--hHHHHhhCc
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD--YEKLKLRIP 508 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~--~~~l~~~~~ 508 (627)
..+.|+++|+++ -||+++|+.|+++|.+|++ ++.++ .+.+.++..
T Consensus 4 ~~~~ilITGas~--GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~ 52 (251)
T COG1028 4 SGKVALVTGASS--GIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK 52 (251)
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH
Confidence 457899999996 9999999999999999776 54443 444444433
No 327
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=84.26 E-value=1.1 Score=47.87 Aligned_cols=140 Identities=17% Similarity=0.237 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHHHHcCCcEEE--ec-------ccccccccccCC---ceeEecC-CCcccc------------------
Q 006894 394 AINSLIEEAILEADAKGVKVIS--LG-------LLNQGEELNRNG---EIYLERQ-PNKLKI------------------ 442 (627)
Q Consensus 394 ~in~~Ie~Ai~~A~~~G~kv~~--LG-------~ln~~e~ln~~g---~~~~~r~-p~~L~i------------------ 442 (627)
+-+.-+...++.|++.|++.-- |. .+...++||.|- ++.+..= |.+++.
T Consensus 45 as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~e~~l~~~I~~lN~d~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~ 124 (294)
T PRK14187 45 ASQLYVRNKQRKAEMLGLRSETILLPSTISESSLIEKINELNNDDSVHGILVQLPVPNHIDKNLIINTIDPEKDVDGFHN 124 (294)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCCh
Confidence 3444466667788999987644 43 223335677774 3344321 222331
Q ss_pred ----eeecCC---hh---HHHHHHhcC-----CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe-cc-hhhhHHHHh
Q 006894 443 ----KVVDGS---SL---AAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-IC-KDDYEKLKL 505 (627)
Q Consensus 443 ----rvv~Gn---sl---taavv~~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l-~~-~~~~~~l~~ 505 (627)
|+..|+ .+ |++.|++=+ +-.-++|+++|.+. -||+-++.+|-++|..|++ .+ ...+++.
T Consensus 125 ~n~g~l~~g~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~aTVt~chs~T~~l~~~-- 200 (294)
T PRK14187 125 ENVGRLFTGQKKNCLIPCTPKGCLYLIKTITRNLSGSDAVVIGRSN--IVGKPMACLLLGENCTVTTVHSATRDLADY-- 200 (294)
T ss_pred hhHHHHhCCCCCCCccCcCHHHHHHHHHHhCCCCCCCEEEEECCCc--cchHHHHHHHhhCCCEEEEeCCCCCCHHHH--
Confidence 233443 22 777766544 45688999999998 9999999999999999999 22 2222211
Q ss_pred hCchhhcccceeccchhhccHHHhcCCCCcEEeeCc
Q 006894 506 RIPVEAQHNLVLSTSYAAHKTEQARAPKGTIFIPYT 541 (627)
Q Consensus 506 ~~~~~~~~~lv~~~~~~~a~~e~~~a~~G~~~~~~s 541 (627)
-++.++|-+.--.......++.++|++++|+-
T Consensus 201 ----~~~ADIvVsAvGkp~~i~~~~ik~gaiVIDVG 232 (294)
T PRK14187 201 ----CSKADILVAAVGIPNFVKYSWIKKGAIVIDVG 232 (294)
T ss_pred ----HhhCCEEEEccCCcCccCHHHcCCCCEEEEec
Confidence 12333432222222236788999999999996
No 328
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=84.03 E-value=2.4 Score=45.71 Aligned_cols=62 Identities=19% Similarity=0.176 Sum_probs=50.3
Q ss_pred hHHHHHHhcCCCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCchhhcc
Q 006894 450 LAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQH 513 (627)
Q Consensus 450 ltaavv~~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~ 513 (627)
+-.....-..|+...+|+++|... -+|.++|.-+.++|.+|++ |++++++++++++.-..+.
T Consensus 20 ~~~~~~~~~~~k~~~hi~itggS~--glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~ 83 (331)
T KOG1210|consen 20 LLDHRSFIVKPKPRRHILITGGSS--GLGLALALECKREGADVTITARSGKKLLEAKAELELLTQV 83 (331)
T ss_pred HHHHHhhhcccCccceEEEecCcc--hhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhcc
Confidence 334444445577779999999985 8999999999999988888 9999999999997776543
No 329
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=83.97 E-value=2.3 Score=36.56 Aligned_cols=61 Identities=20% Similarity=0.328 Sum_probs=41.5
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhcc-CceEEecchhhhHHHHhhCchhhcccceeccc-hhhccHH--HhcCCCCcEE
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQM-GIKVATICKDDYEKLKLRIPVEAQHNLVLSTS-YAAHKTE--QARAPKGTIF 537 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~-~~~v~l~~~~~~~~l~~~~~~~~~~~lv~~~~-~~~a~~e--~~~a~~G~~~ 537 (627)
..++|.++|+ | .+|+.++++|++. +.++.+-++ +++...+ -.....| -+...+|+.+
T Consensus 22 ~~~~v~i~G~-G--~~g~~~a~~l~~~~~~~v~v~~r----------------di~i~~~~~~~~~~~~~~~~~~~~~~v 82 (86)
T cd05191 22 KGKTVVVLGA-G--EVGKGIAKLLADEGGKKVVLCDR----------------DILVTATPAGVPVLEEATAKINEGAVV 82 (86)
T ss_pred CCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEEEcC----------------CEEEEcCCCCCCchHHHHHhcCCCCEE
Confidence 4678999999 7 9999999999987 677777222 3332222 2222233 4777888888
Q ss_pred eeCc
Q 006894 538 IPYT 541 (627)
Q Consensus 538 ~~~s 541 (627)
+|.+
T Consensus 83 ~~~a 86 (86)
T cd05191 83 IDLA 86 (86)
T ss_pred EecC
Confidence 8753
No 330
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=83.93 E-value=4.2 Score=42.21 Aligned_cols=55 Identities=25% Similarity=0.225 Sum_probs=40.6
Q ss_pred hhHHHHHHhcC--CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHh
Q 006894 449 SLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (627)
Q Consensus 449 sltaavv~~~i--p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 505 (627)
.+||+-.+... .+....|++.|++| .||.++++.+...|.+|.. +++++.+.+++
T Consensus 128 ~~ta~~al~~~~~~~~g~~vlI~ga~g--~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~ 186 (329)
T cd08294 128 GLTAYFGLLEICKPKAGETVVVNGAAG--AVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE 186 (329)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEecCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 34555444322 23456899999998 9999998888788999876 78888888865
No 331
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=83.85 E-value=1 Score=48.75 Aligned_cols=48 Identities=19% Similarity=0.268 Sum_probs=43.3
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCchhhc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQ 512 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~ 512 (627)
...+.+.|||| =.|.-||++||++|.+-.| ||.++++.|..++..+.+
T Consensus 6 e~d~iiYGAtG--y~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~ 55 (382)
T COG3268 6 EYDIIIYGATG--YAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAA 55 (382)
T ss_pred ceeEEEEcccc--chhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCcccc
Confidence 45788999999 9999999999999999988 999999999999887653
No 332
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=83.79 E-value=1.7 Score=44.39 Aligned_cols=44 Identities=18% Similarity=0.288 Sum_probs=39.4
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 509 (627)
.+|+++|.++ -||++.|+.+.+-|-+|.+ |+++++++.+.+.+.
T Consensus 6 nTiLITGG~s--GIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~ 51 (245)
T COG3967 6 NTILITGGAS--GIGLALAKRFLELGNTVIICGRNEERLAEAKAENPE 51 (245)
T ss_pred cEEEEeCCcc--hhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcc
Confidence 3689998874 8999999999999999999 999999999988776
No 333
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=83.79 E-value=2.7 Score=43.86 Aligned_cols=77 Identities=13% Similarity=0.154 Sum_probs=50.3
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh-Cch--------hhccccee-ccchhh---ccHH-H
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-IPV--------EAQHNLVL-STSYAA---HKTE-Q 528 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~-~~~--------~~~~~lv~-~~~~~~---a~~e-~ 528 (627)
+|.++| +| .+|.++|+.|.++|.+|+. ++++..++++++ +.. -.+.++|. .++.+. ...+ .
T Consensus 2 ~I~IIG-~G--~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~aDlVilavp~~~~~~~~~~l~ 78 (279)
T PRK07417 2 KIGIVG-LG--LIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVDEASTDLSLLKDCDLVILALPIGLLLPPSEQLI 78 (279)
T ss_pred eEEEEe-ec--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCcccccCCHhHhcCCCEEEEcCCHHHHHHHHHHHH
Confidence 588999 56 9999999999999999988 777777776543 110 12233442 222211 1122 3
Q ss_pred hcCCCCcEEeeCcCCC
Q 006894 529 ARAPKGTIFIPYTQIP 544 (627)
Q Consensus 529 ~~a~~G~~~~~~sq~P 544 (627)
..+++|+++.|.+-++
T Consensus 79 ~~l~~~~ii~d~~Svk 94 (279)
T PRK07417 79 PALPPEAIVTDVGSVK 94 (279)
T ss_pred HhCCCCcEEEeCcchH
Confidence 4578899999988655
No 334
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=83.71 E-value=1.7 Score=42.56 Aligned_cols=27 Identities=22% Similarity=0.397 Sum_probs=25.0
Q ss_pred EEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 466 VLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 466 V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
|+++|||| =||+++++.|.++|.+|+.
T Consensus 1 IlI~GatG--~iG~~l~~~l~~~g~~v~~ 27 (236)
T PF01370_consen 1 ILITGATG--FIGSALVRQLLKKGHEVIV 27 (236)
T ss_dssp EEEETTTS--HHHHHHHHHHHHTTTEEEE
T ss_pred EEEEccCC--HHHHHHHHHHHHcCCcccc
Confidence 78999999 9999999999999999664
No 335
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=83.61 E-value=0.92 Score=46.98 Aligned_cols=33 Identities=30% Similarity=0.322 Sum_probs=29.0
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe--cchhh
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~ 499 (627)
+|+++|++| -||+.+++.|.++|.+|.. |+.++
T Consensus 2 ~vlItG~~G--~iG~~l~~~L~~~g~~V~~~~r~~~~ 36 (328)
T TIGR03466 2 KVLVTGATG--FVGSAVVRLLLEQGEEVRVLVRPTSD 36 (328)
T ss_pred eEEEECCcc--chhHHHHHHHHHCCCEEEEEEecCcc
Confidence 689999999 9999999999999999887 65444
No 336
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=83.60 E-value=1.5 Score=46.79 Aligned_cols=140 Identities=17% Similarity=0.238 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEe--c-------ccccccccccCC---ceeEecC-CCcccc------------------
Q 006894 394 AINSLIEEAILEADAKGVKVISL--G-------LLNQGEELNRNG---EIYLERQ-PNKLKI------------------ 442 (627)
Q Consensus 394 ~in~~Ie~Ai~~A~~~G~kv~~L--G-------~ln~~e~ln~~g---~~~~~r~-p~~L~i------------------ 442 (627)
+-+.-++.-++.|++.|+++.-. . .++..+++|.|- ++.+..= |++++.
T Consensus 44 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~Plp~~id~~~i~~~I~p~KDVDGl~~ 123 (295)
T PRK14174 44 ASQVYVRNKAKSCKEIGMNSTVIELPADTTEEHLLKKIEDLNNDPDVHGILVQQPLPKQIDEFAVTLAIDPAKDVDGFHP 123 (295)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccCh
Confidence 44555666777888888876543 3 334446677774 3333311 222331
Q ss_pred ----eeecCC------hhHHHHHHhcC-----CCCCcEEEEeccCCChhhHHHHHHHHhc----cCceEEe--cchhhhH
Q 006894 443 ----KVVDGS------SLAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQ----MGIKVAT--ICKDDYE 501 (627)
Q Consensus 443 ----rvv~Gn------sltaavv~~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~----~~~~v~l--~~~~~~~ 501 (627)
|+..|. .-|++.|++=+ +-.-++|+++|... -||+-+|..|.+ ++..|++ .++..++
T Consensus 124 ~n~g~l~~~~~~~~~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS~--iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~ 201 (295)
T PRK14174 124 ENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETKGKHCVVVGRSN--IVGKPMANLMLQKLKESNCTVTICHSATKDIP 201 (295)
T ss_pred hhHHHHhcCCCCCCcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCC--cchHHHHHHHHhccccCCCEEEEEeCCchhHH
Confidence 222232 25777777655 34678999999998 999999999986 7888888 3332222
Q ss_pred HHHhhCchhhcccceeccchhhccHHHhcCCCCcEEeeCc
Q 006894 502 KLKLRIPVEAQHNLVLSTSYAAHKTEQARAPKGTIFIPYT 541 (627)
Q Consensus 502 ~l~~~~~~~~~~~lv~~~~~~~a~~e~~~a~~G~~~~~~s 541 (627)
+ .+ ++.++|-+.--.+.....++.++|++++|+.
T Consensus 202 ~---~~---~~ADIvI~Avg~~~li~~~~vk~GavVIDVg 235 (295)
T PRK14174 202 S---YT---RQADILIAAIGKARFITADMVKPGAVVIDVG 235 (295)
T ss_pred H---HH---HhCCEEEEecCccCccCHHHcCCCCEEEEee
Confidence 2 22 2233332222122336678889999999997
No 337
>KOG2380 consensus Prephenate dehydrogenase (NADP+) [Amino acid transport and metabolism]
Probab=83.51 E-value=2.4 Score=46.25 Aligned_cols=138 Identities=22% Similarity=0.311 Sum_probs=88.6
Q ss_pred ccccCCceeEecCCCcccceeecCChhHHHHHH-hcCCC--CCcEEEEeccCCChhhHHHHHHHHhccCceEEecchhhh
Q 006894 424 ELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVV-NSLPK--TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDY 500 (627)
Q Consensus 424 ~ln~~g~~~~~r~p~~L~irvv~Gnsltaavv~-~~ip~--~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~ 500 (627)
+|.++-.-+..--|.-|++|-.|--+.+-+.+. +++.+ .+.+|.++|=. ..|+-.|..|.+.|-.+..-++++|
T Consensus 10 ~l~~~~~t~~~~~p~~~~~~a~~~~~i~d~~~~~~s~~~~k~tl~IaIIGfG---nmGqflAetli~aGh~li~hsRsdy 86 (480)
T KOG2380|consen 10 NLRRNSPTFLISPPRSLRIRAIDAAQIFDYMVSEDSIEQWKATLVIAIIGFG---NMGQFLAETLIDAGHGLICHSRSDY 86 (480)
T ss_pred CcccCCCceeccCcHHHHHHhhhhhhhhhcccCcchhhhcccceEEEEEecC---cHHHHHHHHHHhcCceeEecCcchh
Confidence 344444545555555466776664444444333 22322 46688888865 8999999999999999999666669
Q ss_pred HHHHhhCchh----------hcccce-eccch---hhcc--HHHhcCCCCcEEeeCcCC--CCc-----CCCCCeeEecc
Q 006894 501 EKLKLRIPVE----------AQHNLV-LSTSY---AAHK--TEQARAPKGTIFIPYTQI--PPR-----KLRKDCFYHST 557 (627)
Q Consensus 501 ~~l~~~~~~~----------~~~~lv-~~~~~---~~a~--~e~~~a~~G~~~~~~sq~--P~~-----~~R~dc~~~~~ 557 (627)
+++++..+.. ++.+.| .+++. ++-+ -..++.+-||+|.|+.-+ |++ -+-+||-++.+
T Consensus 87 ssaa~~yg~~~ft~lhdlcerhpDvvLlctsilsiekilatypfqrlrrgtlfvdvlSvKefek~lfekYLPkdfDIlct 166 (480)
T KOG2380|consen 87 SSAAEKYGSAKFTLLHDLCERHPDVVLLCTSILSIEKILATYPFQRLRRGTLFVDVLSVKEFEKELFEKYLPKDFDILCT 166 (480)
T ss_pred HHHHHHhcccccccHHHHHhcCCCEEEEEehhhhHHHHHHhcCchhhccceeEeeeeecchhHHHHHHHhCccccceEee
Confidence 9999886652 333433 33332 1111 225678999999988753 233 34599999877
Q ss_pred CccccCC
Q 006894 558 PAMIIPP 564 (627)
Q Consensus 558 p~~~~P~ 564 (627)
-.|-=|+
T Consensus 167 HpmfGPk 173 (480)
T KOG2380|consen 167 HPMFGPK 173 (480)
T ss_pred cCCcCCC
Confidence 7775555
No 338
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=83.34 E-value=1.4 Score=46.06 Aligned_cols=32 Identities=22% Similarity=0.209 Sum_probs=27.0
Q ss_pred EEEEeccCCChhhHHHHHHHHhccC--ceEEe--cchh
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMG--IKVAT--ICKD 498 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~--~~v~l--~~~~ 498 (627)
+|+|+|||| -||+.+++.|.++| .+|.. |+.+
T Consensus 1 ~vlvtGatG--~lG~~l~~~L~~~g~~~~V~~l~R~~~ 36 (367)
T TIGR01746 1 TVLLTGATG--FLGAYLLEELLRRSTQAKVICLVRAAS 36 (367)
T ss_pred CEEEeccch--HHHHHHHHHHHhCCCCCEEEEEEccCC
Confidence 489999999 99999999999887 56666 6554
No 339
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=83.19 E-value=1.7 Score=46.81 Aligned_cols=119 Identities=12% Similarity=0.057 Sum_probs=66.8
Q ss_pred cEEEEeccCCChhhHHHHHHHHhcc-CceEEe-cchhhhHHHHhhCchh-hcccceec-c-chhhccHHHhcCCCCcEEe
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQM-GIKVAT-ICKDDYEKLKLRIPVE-AQHNLVLS-T-SYAAHKTEQARAPKGTIFI 538 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~-~~~v~l-~~~~~~~~l~~~~~~~-~~~~lv~~-~-~~~~a~~e~~~a~~G~~~~ 538 (627)
-+|+++|||| -+|..+.+.|.++ .++++- .+++ ...+. ..... .+.++|++ + +-..++..++-+.+|+.++
T Consensus 3 ~~VaIvGAtG--y~G~eLlrlL~~hp~~~l~~~~s~~-~~~~~-~~~~~~~~~DvvFlalp~~~s~~~~~~~~~~g~~VI 78 (313)
T PRK11863 3 PKVFIDGEAG--TTGLQIRERLAGRSDIELLSIPEAK-RKDAA-ARRELLNAADVAILCLPDDAAREAVALIDNPATRVI 78 (313)
T ss_pred cEEEEECCCC--HHHHHHHHHHhcCCCeEEEEEecCC-CCccc-CchhhhcCCCEEEECCCHHHHHHHHHHHHhCCCEEE
Confidence 3799999999 9999999999964 666665 1111 11111 11111 23455533 3 2223333444456899999
Q ss_pred eCcCCCCc-CCCCCeeEeccCccccCCCccccccccccccchhHHH-HHHhHHHhhhcCC
Q 006894 539 PYTQIPPR-KLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSA-WRIAGIIHALEGW 596 (627)
Q Consensus 539 ~~sq~P~~-~~R~dc~~~~~p~~~~P~~~~~~~~~e~~~pr~~~~A-c~a~~~~~alEg~ 596 (627)
|.| .. .+++|+.|+---.+. +..+.+ .-.+.+.-+ |.+-+++++|--.
T Consensus 79 DlS---adfRl~~~~~yglPEvn~--~~~~~i-----~~~~~IanPgC~~Ta~~laL~PL 128 (313)
T PRK11863 79 DAS---TAHRTAPGWVYGFPELAP--GQRERI-----AAAKRVANPGCYPTGAIALLRPL 128 (313)
T ss_pred ECC---hhhhcCCCCeEEcCccCH--HHHHHh-----hcCCeEEcCCcHHHHHHHHHHHH
Confidence 998 66 777888775322110 001101 111223334 9999999887554
No 340
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=83.06 E-value=2.7 Score=36.15 Aligned_cols=42 Identities=19% Similarity=0.200 Sum_probs=35.8
Q ss_pred EEEEeccCCChhhHHHHHHHHhccC---ceEEe---cchhhhHHHHhhCch
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMG---IKVAT---ICKDDYEKLKLRIPV 509 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~---~~v~l---~~~~~~~~l~~~~~~ 509 (627)
+|.++|+- ++|.++++.|.+.| .++++ |++|+.++++++.+.
T Consensus 1 kI~iIG~G---~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~ 48 (96)
T PF03807_consen 1 KIGIIGAG---NMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGV 48 (96)
T ss_dssp EEEEESTS---HHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTT
T ss_pred CEEEECCC---HHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcc
Confidence 46778665 99999999999999 89985 999999999888663
No 341
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=83.06 E-value=1.9 Score=45.78 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=27.8
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
..+.++++|+...+-||+|+|+.|+++|.+|.+
T Consensus 7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv 39 (299)
T PRK06300 7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILV 39 (299)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEE
Confidence 456789999951148999999999999999999
No 342
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=82.52 E-value=3.3 Score=44.71 Aligned_cols=41 Identities=10% Similarity=0.082 Sum_probs=33.4
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHh
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 505 (627)
+-++|.|+|+- -+|+.+|..+++.|.+|++ ++++..++.++
T Consensus 6 ~i~~VaVIGaG---~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~ 48 (321)
T PRK07066 6 DIKTFAAIGSG---VIGSGWVARALAHGLDVVAWDPAPGAEAALRA 48 (321)
T ss_pred CCCEEEEECcC---HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence 45689999985 8999999999999999999 66665555433
No 343
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=82.38 E-value=3 Score=43.25 Aligned_cols=54 Identities=26% Similarity=0.328 Sum_probs=40.7
Q ss_pred hHHHHHHhcCC-----CCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHh
Q 006894 450 LAAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (627)
Q Consensus 450 ltaavv~~~ip-----~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 505 (627)
+||+..++.+. .+..+|++.|++| .+|.++++.+.++|.+|.. +++++.+.+++
T Consensus 129 ~ta~~~l~~~~~~~~~~~~~~vlI~g~~g--~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 189 (326)
T cd08289 129 FTAALSIHRLEENGLTPEQGPVLVTGATG--GVGSLAVSILAKLGYEVVASTGKADAADYLKK 189 (326)
T ss_pred HHHHHHHHHHHhcCCCCCCCEEEEEcCCc--hHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH
Confidence 35555554432 2356899999998 9999999988889999877 78888877743
No 344
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=82.28 E-value=1.8 Score=47.13 Aligned_cols=39 Identities=26% Similarity=0.444 Sum_probs=31.3
Q ss_pred EEEeccCCChhhHHHHHHHHhccC-c-eEEe--cchhhhHHHHhhC
Q 006894 466 VLLRGTVTANKVANAVASSLCQMG-I-KVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 466 V~l~Gatg~~kig~ava~~L~~~~-~-~v~l--~~~~~~~~l~~~~ 507 (627)
|++.|+ | .||+++|+.|++++ . ++++ ||.++.+++.+++
T Consensus 1 IlvlG~-G--~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~ 43 (386)
T PF03435_consen 1 ILVLGA-G--RVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL 43 (386)
T ss_dssp EEEE---S--HHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--
T ss_pred CEEEcC-c--HHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc
Confidence 689999 9 99999999999875 5 7888 9999999998764
No 345
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=82.09 E-value=1.5 Score=46.87 Aligned_cols=140 Identities=19% Similarity=0.271 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHHcCCcEE--Eec-------ccccccccccCC---ceeEecC-CCccc----------ceeecCCh-
Q 006894 394 AINSLIEEAILEADAKGVKVI--SLG-------LLNQGEELNRNG---EIYLERQ-PNKLK----------IKVVDGSS- 449 (627)
Q Consensus 394 ~in~~Ie~Ai~~A~~~G~kv~--~LG-------~ln~~e~ln~~g---~~~~~r~-p~~L~----------irvv~Gns- 449 (627)
+-+.-+....+.|++.|++.. -|. +++..+++|.|- ++.+..= |++++ .+=|||=+
T Consensus 44 as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PLP~~i~~~~i~~~I~p~KDVDGl~~ 123 (297)
T PRK14167 44 ASETYVSMKQRDCEEVGIEAIDVEIDPDAPAEELYDTIDELNADEDVHGILVQMPVPDHVDDREVLRRIDPAKDVDGFHP 123 (297)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCcccCcccCCh
Confidence 344445666778888888764 343 233335677764 4333311 22222 12234433
Q ss_pred ---------------hHHHHHHhcC-----CCCCcEEEEeccCCChhhHHHHHHHHhcc----CceEEe-cc-hhhhHHH
Q 006894 450 ---------------LAAAVVVNSL-----PKTTAHVLLRGTVTANKVANAVASSLCQM----GIKVAT-IC-KDDYEKL 503 (627)
Q Consensus 450 ---------------ltaavv~~~i-----p~~~~~V~l~Gatg~~kig~ava~~L~~~----~~~v~l-~~-~~~~~~l 503 (627)
-|+..|++=+ +-.-++|+++|... -||+-+|..|-++ +..|++ .+ .+.+++.
T Consensus 124 ~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~--iVGkPla~lL~~~~~~~~aTVtvchs~T~~l~~~ 201 (297)
T PRK14167 124 ENVGRLVAGDARFKPCTPHGIQKLLAAAGVDTEGADVVVVGRSD--IVGKPMANLLIQKADGGNATVTVCHSRTDDLAAK 201 (297)
T ss_pred hhhHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc--ccHHHHHHHHhcCccCCCCEEEEeCCCCCCHHHH
Confidence 3666666544 44678999999998 9999999999987 888998 22 2222211
Q ss_pred HhhCchhhcccceeccchhhccHHHhcCCCCcEEeeCc
Q 006894 504 KLRIPVEAQHNLVLSTSYAAHKTEQARAPKGTIFIPYT 541 (627)
Q Consensus 504 ~~~~~~~~~~~lv~~~~~~~a~~e~~~a~~G~~~~~~s 541 (627)
-++.++|-+.-=.+.....++.++|++++|+.
T Consensus 202 ------~~~ADIvIsAvGkp~~i~~~~ik~gaiVIDvG 233 (297)
T PRK14167 202 ------TRRADIVVAAAGVPELIDGSMLSEGATVIDVG 233 (297)
T ss_pred ------HhhCCEEEEccCCcCccCHHHcCCCCEEEEcc
Confidence 13334433322222236789999999999987
No 346
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=82.06 E-value=2.5 Score=45.76 Aligned_cols=29 Identities=10% Similarity=0.129 Sum_probs=24.9
Q ss_pred cEEEEeccCCChhhHHHHHHHHhcc-CceEEe
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQM-GIKVAT 494 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~-~~~v~l 494 (627)
.+|+++|||| -+|+.+++.|.+. +.++..
T Consensus 3 ~kVaIiGAtG--~vG~~l~~~L~~~p~~elv~ 32 (343)
T PRK00436 3 IKVGIVGASG--YTGGELLRLLLNHPEVEIVA 32 (343)
T ss_pred eEEEEECCCC--HHHHHHHHHHHcCCCceEEE
Confidence 4799999999 9999999999964 777655
No 347
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=81.97 E-value=1.5 Score=46.39 Aligned_cols=30 Identities=17% Similarity=0.185 Sum_probs=27.7
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
.+.|+|+|++| -||+++++.|.++|.+|..
T Consensus 6 ~~~vlVTGatG--fiG~~l~~~L~~~G~~V~~ 35 (340)
T PLN02653 6 RKVALITGITG--QDGSYLTEFLLSKGYEVHG 35 (340)
T ss_pred CCEEEEECCCC--ccHHHHHHHHHHCCCEEEE
Confidence 35799999999 9999999999999999987
No 348
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=81.77 E-value=2.2 Score=46.37 Aligned_cols=126 Identities=9% Similarity=0.090 Sum_probs=64.9
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCc---eEEe----cchhhhHHHHh------hCchh--hcccceecc--chhhc
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGI---KVAT----ICKDDYEKLKL------RIPVE--AQHNLVLST--SYAAH 524 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~---~v~l----~~~~~~~~l~~------~~~~~--~~~~lv~~~--~~~~a 524 (627)
...+|+++|||| .+|+.+.+.|.+++. ++.. |+.++-...+. ++..+ .+.++|... +-..+
T Consensus 6 ~~~kVaVvGAtG--~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~~~~~~~v~~~~~~~~~~~D~vf~a~p~~~s~ 83 (344)
T PLN02383 6 NGPSVAIVGVTG--AVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTFEGRDYTVEELTEDSFDGVDIALFSAGGSISK 83 (344)
T ss_pred CCCeEEEEcCCC--hHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeeecCceeEEEeCCHHHHcCCCEEEECCCcHHHH
Confidence 345899999999 999999999997543 3332 33222111110 01100 123334222 22222
Q ss_pred cHHHhcCCCCcEEeeCcCCCCc-CCCCCeeEeccCccccCCCccccccccccc-cchhHHH--HHHhHHHhhhcCCC
Q 006894 525 KTEQARAPKGTIFIPYTQIPPR-KLRKDCFYHSTPAMIIPPSLSNMHSCENWL-GRRVMSA--WRIAGIIHALEGWD 597 (627)
Q Consensus 525 ~~e~~~a~~G~~~~~~sq~P~~-~~R~dc~~~~~p~~~~P~~~~~~~~~e~~~-pr~~~~A--c~a~~~~~alEg~~ 597 (627)
...++-+.+|+.++|.| .. .+++|+.|+--..+ ++.+++-. ..- +++.+.- |.+-+++++|-...
T Consensus 84 ~~~~~~~~~g~~VIDlS---~~fR~~~~~p~~vPEvn--~~~i~~~~---~~~~~~~iIanPgC~~t~~~laL~PL~ 152 (344)
T PLN02383 84 KFGPIAVDKGAVVVDNS---SAFRMEEGVPLVIPEVN--PEAMKHIK---LGKGKGALIANPNCSTIICLMAVTPLH 152 (344)
T ss_pred HHHHHHHhCCCEEEECC---chhhcCCCCceECCCcC--HHHHHhhh---hcccCCcEEECCCcHHHHHHHHHHHHH
Confidence 23344456899999998 66 66677665321111 01122110 000 1223332 99999988876554
No 349
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=81.29 E-value=1.7 Score=39.81 Aligned_cols=34 Identities=18% Similarity=0.226 Sum_probs=27.3
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCc-eEEe--cchhh
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDD 499 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~ 499 (627)
+.|+++|++| -||+++++.|+++|. .|.+ |++++
T Consensus 1 ~~~li~Ga~~--~iG~~~~~~l~~~g~~~v~~~~r~~~~ 37 (180)
T smart00822 1 GTYLITGGLG--GLGLELARWLAERGARHLVLLSRSGPD 37 (180)
T ss_pred CEEEEEcCCC--hHHHHHHHHHHHhhCCeEEEEeCCCCC
Confidence 3689999998 999999999999886 4555 55443
No 350
>PLN00016 RNA-binding protein; Provisional
Probab=81.22 E-value=1.5 Score=47.42 Aligned_cols=37 Identities=22% Similarity=0.229 Sum_probs=31.8
Q ss_pred CCCCcEEEEe----ccCCChhhHHHHHHHHhccCceEEe--cchh
Q 006894 460 PKTTAHVLLR----GTVTANKVANAVASSLCQMGIKVAT--ICKD 498 (627)
Q Consensus 460 p~~~~~V~l~----Gatg~~kig~ava~~L~~~~~~v~l--~~~~ 498 (627)
....++|+|+ |+|| -||+.+++.|.++|.+|+. |+.+
T Consensus 49 ~~~~~~VLVt~~~~GatG--~iG~~lv~~L~~~G~~V~~l~R~~~ 91 (378)
T PLN00016 49 AVEKKKVLIVNTNSGGHA--FIGFYLAKELVKAGHEVTLFTRGKE 91 (378)
T ss_pred ccccceEEEEeccCCCce--eEhHHHHHHHHHCCCEEEEEecCCc
Confidence 3455789999 9999 9999999999999999987 6554
No 351
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=81.13 E-value=2.8 Score=48.10 Aligned_cols=89 Identities=18% Similarity=0.197 Sum_probs=55.8
Q ss_pred HHHHcCCcEEEecccc------------cccccccCCceeEecCCCcccceeecCChhHHHHHHhcCCCCCcEEEEeccC
Q 006894 405 EADAKGVKVISLGLLN------------QGEELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTV 472 (627)
Q Consensus 405 ~A~~~G~kv~~LG~ln------------~~e~ln~~g~~~~~r~p~~L~irvv~Gnsltaavv~~~ip~~~~~V~l~Gat 472 (627)
...++|+.++++=.+. ++-++.|+..+...-| .|.-.+ +|..-+|. .+| .++|+|.|+-
T Consensus 103 ~l~~k~it~ia~E~vprisraq~~d~lssma~iAGy~Avi~Aa~--~lgr~~-~g~~taag----~vp--~akVlViGaG 173 (511)
T TIGR00561 103 KLAAKNITVLAMDAVPRISRAQKLDALSSMANIAGYRAIIEAAH--EFGRFF-TGQITAAG----KVP--PAKVLVIGAG 173 (511)
T ss_pred HHHHcCCEEEEeecccccccCCccCcchhhHHHHHHHHHHHHHH--Hhhhhc-CCceecCC----CCC--CCEEEEECCC
Confidence 3466788888876544 3334444444333322 022233 45544332 344 4799999984
Q ss_pred CChhhHHHHHHHHhccCceEEe--cchhhhHHHHh
Q 006894 473 TANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (627)
Q Consensus 473 g~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 505 (627)
-+|.+.+..+...|.+|.. ++.++.+..++
T Consensus 174 ---~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~ 205 (511)
T TIGR00561 174 ---VAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS 205 (511)
T ss_pred ---HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 8999999999989988887 77777776653
No 352
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=81.11 E-value=4.7 Score=40.77 Aligned_cols=41 Identities=20% Similarity=0.285 Sum_probs=34.5
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHH
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~ 504 (627)
...+|++.|++| .+|.++++.+...|.++.+ +++++.+.++
T Consensus 139 ~~~~vlv~g~~~--~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~ 181 (323)
T cd05276 139 AGETVLIHGGAS--GVGTAAIQLAKALGARVIATAGSEEKLEACR 181 (323)
T ss_pred CCCEEEEEcCcC--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH
Confidence 356899999998 9999999999999999877 7777777664
No 353
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=81.08 E-value=5.8 Score=35.88 Aligned_cols=28 Identities=18% Similarity=0.248 Sum_probs=23.8
Q ss_pred EEEEeccCCChhhHHHHHHHHhc-cCceEEe
Q 006894 465 HVLLRGTVTANKVANAVASSLCQ-MGIKVAT 494 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~-~~~~v~l 494 (627)
+|.++|++| .+|+.++..|.+ +++++..
T Consensus 1 ki~iiG~~g--~~g~~~~~~l~~~~~~~l~a 29 (122)
T smart00859 1 KVAIVGATG--YVGQELLRLLAEHPDFEVVA 29 (122)
T ss_pred CEEEECCCC--hHHHHHHHHHhcCCCceEEE
Confidence 478999999 999999999997 5777665
No 354
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=81.05 E-value=5.6 Score=42.86 Aligned_cols=138 Identities=16% Similarity=0.120 Sum_probs=90.0
Q ss_pred EEEeecccCcceeeEEEEeccCc-ccccchhhHHHHHHHHHHHHHHHHcCCcEEEecccccccccccCCceeEecCCCcc
Q 006894 362 FVSESNTLDKLKLQTWVVPRYIV-QYNLPWRREAINSLIEEAILEADAKGVKVISLGLLNQGEELNRNGEIYLERQPNKL 440 (627)
Q Consensus 362 f~~~~~~~~~~~~~~w~~pr~~~-~y~~~~~~~~in~~Ie~Ai~~A~~~G~kv~~LG~ln~~e~ln~~g~~~~~r~p~~L 440 (627)
=.+..-+..++..--||+--.|+ .|.+-.. + ++.| ++-.. -.+. -
T Consensus 81 ~~Vv~S~~~~f~~GD~V~~~~GWq~y~i~~~-~------------------------~l~K---vd~~~-----~pl~-~ 126 (340)
T COG2130 81 AKVVASNHPGFQPGDIVVGVSGWQEYAISDG-E------------------------GLRK---LDPSP-----APLS-A 126 (340)
T ss_pred EEEEecCCCCCCCCCEEEecccceEEEeech-h------------------------hcee---cCCCC-----CCcc-h
Confidence 34555566777778888888888 4554221 1 2222 11000 0111 2
Q ss_pred cceeecCChhHHHHHHhcC--CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCchhhcccce
Q 006894 441 KIKVVDGSSLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLV 516 (627)
Q Consensus 441 ~irvv~Gnsltaavv~~~i--p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~lv 516 (627)
-.-+.-..++||+..+..| ||.-.+|++.||+| -||+.+.+.---+|-+|.= -+.|+-.-+.+++.-....|-
T Consensus 127 ~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaG--aVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idy- 203 (340)
T COG2130 127 YLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAG--AVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDY- 203 (340)
T ss_pred HHhhcCCchHHHHHHHHHhcCCCCCCEEEEEeccc--ccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeec-
Confidence 3678888899999999999 77788999999999 9999999855457888876 778888878777776552221
Q ss_pred eccchhhccHHHhcCCCCcEEe
Q 006894 517 LSTSYAAHKTEQARAPKGTIFI 538 (627)
Q Consensus 517 ~~~~~~~a~~e~~~a~~G~~~~ 538 (627)
.-.++.+++. +-+|+|.-+.
T Consensus 204 k~~d~~~~L~--~a~P~GIDvy 223 (340)
T COG2130 204 KAEDFAQALK--EACPKGIDVY 223 (340)
T ss_pred CcccHHHHHH--HHCCCCeEEE
Confidence 1113444433 4577886554
No 355
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=81.03 E-value=1.6 Score=44.89 Aligned_cols=28 Identities=18% Similarity=0.291 Sum_probs=26.2
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
.|+|+|+|| -||+++++.|.++|.+|..
T Consensus 2 ~ILVtG~tG--fiG~~l~~~L~~~g~~V~~ 29 (314)
T COG0451 2 RILVTGGAG--FIGSHLVERLLAAGHDVRG 29 (314)
T ss_pred eEEEEcCcc--cHHHHHHHHHHhCCCeEEE
Confidence 389999999 9999999999998999888
No 356
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=80.83 E-value=2.6 Score=42.55 Aligned_cols=80 Identities=14% Similarity=0.099 Sum_probs=51.6
Q ss_pred CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEecc--hh---------hhH-----HHHhhCch-hhcccceeccchh
Q 006894 460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVATIC--KD---------DYE-----KLKLRIPV-EAQHNLVLSTSYA 522 (627)
Q Consensus 460 p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l~~--~~---------~~~-----~l~~~~~~-~~~~~lv~~~~~~ 522 (627)
+-.-++|+++|... -||+-+|..|.++|..|++-+ .. ++. ++...+.+ -++.++|-+.--.
T Consensus 59 ~l~GK~vvVIGrS~--iVGkPla~lL~~~~AtVti~~~~~~~~~~~~~~~~hs~t~~~~~~~~l~~~~~~ADIVIsAvG~ 136 (197)
T cd01079 59 RLYGKTITIINRSE--VVGRPLAALLANDGARVYSVDINGIQVFTRGESIRHEKHHVTDEEAMTLDCLSQSDVVITGVPS 136 (197)
T ss_pred CCCCCEEEEECCCc--cchHHHHHHHHHCCCEEEEEecCcccccccccccccccccccchhhHHHHHhhhCCEEEEccCC
Confidence 44678999999998 999999999999999998821 10 011 10111111 1333443222222
Q ss_pred hcc-HHHhcCCCCcEEeeCc
Q 006894 523 AHK-TEQARAPKGTIFIPYT 541 (627)
Q Consensus 523 ~a~-~e~~~a~~G~~~~~~s 541 (627)
+.. ...++.++|++++|+.
T Consensus 137 ~~~~i~~d~ik~GavVIDVG 156 (197)
T cd01079 137 PNYKVPTELLKDGAICINFA 156 (197)
T ss_pred CCCccCHHHcCCCcEEEEcC
Confidence 333 5788999999999998
No 357
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=80.79 E-value=5.7 Score=40.64 Aligned_cols=42 Identities=19% Similarity=0.136 Sum_probs=35.5
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHh
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 505 (627)
....|++.|++| .+|.++++.....|.++.. +++++.+.+++
T Consensus 132 ~~~~vli~g~~~--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 175 (305)
T cd08270 132 LGRRVLVTGASG--GVGRFAVQLAALAGAHVVAVVGSPARAEGLRE 175 (305)
T ss_pred CCCEEEEECCCc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 367999999998 9999999988889999877 77788887765
No 358
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=80.75 E-value=5.9 Score=40.19 Aligned_cols=40 Identities=20% Similarity=0.223 Sum_probs=33.7
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHH
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~ 504 (627)
.+.|++.|+.| .+|.++++.+..+|.++.+ +++++.+.++
T Consensus 145 g~~vlI~g~~~--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 186 (325)
T cd08253 145 GETVLVHGGSG--AVGHAAVQLARWAGARVIATASSAEGAELVR 186 (325)
T ss_pred CCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 46899999987 9999999998889999888 6677776664
No 359
>PLN02494 adenosylhomocysteinase
Probab=80.74 E-value=18 Score=41.34 Aligned_cols=152 Identities=16% Similarity=0.140 Sum_probs=91.0
Q ss_pred ceeecCChhHHHHHHhcCC--CCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhh-hHHHHhhCc----hh--
Q 006894 442 IKVVDGSSLAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD-YEKLKLRIP----VE-- 510 (627)
Q Consensus 442 irvv~Gnsltaavv~~~ip--~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~-~~~l~~~~~----~~-- 510 (627)
-|.=+|.|. .-.+.+... ..-++|.|+|.- +||+.+|+.|...|.+|+. ++..+ .+....... ++
T Consensus 232 n~yGtgqS~-~d~i~r~t~i~LaGKtVvViGyG---~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv~leEal 307 (477)
T PLN02494 232 NLYGCRHSL-PDGLMRATDVMIAGKVAVICGYG---DVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVLTLEDVV 307 (477)
T ss_pred ccccccccH-HHHHHHhcCCccCCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeeccHHHHH
Confidence 366667775 333334432 246789999987 9999999999888999988 55544 222211110 01
Q ss_pred hcccceeccchh-hcc--HHHhcCCCCcEEeeCcCCC-----------C-c---CCCCCeeEeccCc----ccc--CCCc
Q 006894 511 AQHNLVLSTSYA-AHK--TEQARAPKGTIFIPYTQIP-----------P-R---KLRKDCFYHSTPA----MII--PPSL 566 (627)
Q Consensus 511 ~~~~lv~~~~~~-~a~--~e~~~a~~G~~~~~~sq~P-----------~-~---~~R~dc~~~~~p~----~~~--P~~~ 566 (627)
.+.++|..++-. ... ..-+.+++|++++-+.-+. + . +.|..+..-..|- +.+ -|.+
T Consensus 308 ~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~~eID~~aL~~~~~l~~~~i~~~vd~y~~~d~g~~i~ll~eGrl 387 (477)
T PLN02494 308 SEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTGSGIIVLAEGRL 387 (477)
T ss_pred hhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCCCCccCHHHHhhccccceeccCCCceEEEcCCCCCEEEEEeCCcc
Confidence 123433333222 221 3457899999999888321 1 0 3333333333322 222 4567
Q ss_pred cccccccccccchhHHHHHHhHHHhhhcCCCC
Q 006894 567 SNMHSCENWLGRRVMSAWRIAGIIHALEGWDL 598 (627)
Q Consensus 567 ~~~~~~e~~~pr~~~~Ac~a~~~~~alEg~~~ 598 (627)
-|+. |-.|.|..+|.-.++--.+-..|-|..
T Consensus 388 vNl~-~~~GhP~evmd~sFa~Q~la~~~l~~~ 418 (477)
T PLN02494 388 MNLG-CATGHPSFVMSCSFTNQVIAQLELWNE 418 (477)
T ss_pred cccc-CCCCCCcceeeHHHHHHHHHHHHHHhc
Confidence 7887 899999999998887766666666654
No 360
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=80.64 E-value=3 Score=47.30 Aligned_cols=60 Identities=27% Similarity=0.390 Sum_probs=45.1
Q ss_pred ecCChhHHHHHHhcCCCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 445 VDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 445 v~Gnsltaavv~~~ip~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
|||.....+.--+......+.|+++|+ | .+|++++..|.+.|.++.+ |+.++.+++.++.
T Consensus 314 TD~~G~~~~l~~~~~~~~~k~vlIiGa-G--giG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~ 375 (477)
T PRK09310 314 TDGEGLFSLLKQKNIPLNNQHVAIVGA-G--GAAKAIATTLARAGAELLIFNRTKAHAEALASRC 375 (477)
T ss_pred cCHHHHHHHHHhcCCCcCCCEEEEEcC-c--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 566666655533334445678999996 6 8999999999999999888 7777777776554
No 361
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=80.62 E-value=4.6 Score=42.22 Aligned_cols=77 Identities=14% Similarity=0.223 Sum_probs=51.1
Q ss_pred EEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh-Cc-h-h-----hcccceecc--chhh---cc--HH-
Q 006894 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-IP-V-E-----AQHNLVLST--SYAA---HK--TE- 527 (627)
Q Consensus 466 V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~-~~-~-~-----~~~~lv~~~--~~~~---a~--~e- 527 (627)
|.++|. | .+|+++|+.|++.|.+|+. |++++.+.+++. .. . + .+.++|.+. +... .. .+
T Consensus 2 IgvIG~-G--~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDivi~~vp~~~~~~~v~~~~~~ 78 (291)
T TIGR01505 2 VGFIGL-G--IMGSPMSINLAKAGYQLHVTTIGPEVADELLAAGAVTAETARQVTEQADVIFTMVPDSPQVEEVAFGENG 78 (291)
T ss_pred EEEEEe-c--HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCcccCCHHHHHhcCCEEEEecCCHHHHHHHHcCcch
Confidence 778886 4 9999999999999999998 888888887754 11 0 1 233444222 1111 10 11
Q ss_pred -HhcCCCCcEEeeCcCCCC
Q 006894 528 -QARAPKGTIFIPYTQIPP 545 (627)
Q Consensus 528 -~~~a~~G~~~~~~sq~P~ 545 (627)
...+++|+++++.|-.+|
T Consensus 79 ~~~~~~~g~iivd~st~~~ 97 (291)
T TIGR01505 79 IIEGAKPGKTLVDMSSISP 97 (291)
T ss_pred HhhcCCCCCEEEECCCCCH
Confidence 245789999999887665
No 362
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=80.40 E-value=1.8 Score=45.49 Aligned_cols=28 Identities=25% Similarity=0.300 Sum_probs=26.4
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
+|+|+|+|| -||+++|+.|.++|.+|++
T Consensus 2 ~vlVtGatG--~iG~~l~~~L~~~g~~V~~ 29 (338)
T PRK10675 2 RVLVTGGSG--YIGSHTCVQLLQNGHDVVI 29 (338)
T ss_pred eEEEECCCC--hHHHHHHHHHHHCCCeEEE
Confidence 589999999 9999999999999999987
No 363
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=80.36 E-value=1.1 Score=48.67 Aligned_cols=120 Identities=14% Similarity=0.196 Sum_probs=61.4
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCce---EEe--cchhhhHH--HHh-h-----Cchh--hcccce-ecc-chhhccHH
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIK---VAT--ICKDDYEK--LKL-R-----IPVE--AQHNLV-LST-SYAAHKTE 527 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~---v~l--~~~~~~~~--l~~-~-----~~~~--~~~~lv-~~~-~~~~a~~e 527 (627)
+|+++|||| .+|+.+.+.|.+++.. +.. ++++.=+. ++. + +..+ .+.++| ..+ +-..+...
T Consensus 1 ~VaIvGAtG--~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~~~~~~~~~~~~~~~~~~~D~v~~a~g~~~s~~~a 78 (339)
T TIGR01296 1 NVAIVGATG--AVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTFKGKELEVNEAKIESFEGIDIALFSAGGSVSKEFA 78 (339)
T ss_pred CEEEEcCCC--HHHHHHHHHHHhCCCChhhEEEEeccccCCCeeeeCCeeEEEEeCChHHhcCCCEEEECCCHHHHHHHH
Confidence 489999999 9999999999975443 332 22221111 110 0 0000 123333 223 22222344
Q ss_pred HhcCCCCcEEeeCcCCCCc-CCCCCeeEeccCccccCCC-ccccccccccccchhHH-H-HHHhHHHhhhcCCCC
Q 006894 528 QARAPKGTIFIPYTQIPPR-KLRKDCFYHSTPAMIIPPS-LSNMHSCENWLGRRVMS-A-WRIAGIIHALEGWDL 598 (627)
Q Consensus 528 ~~~a~~G~~~~~~sq~P~~-~~R~dc~~~~~p~~~~P~~-~~~~~~~e~~~pr~~~~-A-c~a~~~~~alEg~~~ 598 (627)
++.+.+|+.++|.| .. .+++|+-|+ +|+- -+.+. ....++.++ + |.+-+++++|---..
T Consensus 79 ~~~~~~G~~VID~s---s~~R~~~~~p~~------vpevN~~~i~---~~~~~~iianp~C~~t~~~l~l~pL~~ 141 (339)
T TIGR01296 79 PKAAKCGAIVIDNT---SAFRMDPDVPLV------VPEVNLEDLK---EFNTKGIIANPNCSTIQMVVVLKPLHD 141 (339)
T ss_pred HHHHHCCCEEEECC---HHHhCCCCCCEE------eCCcCHHHHh---hCccCCEEECCCcHHHHHHHHHHHHHH
Confidence 55567899999988 44 445565442 3331 00011 111122333 3 998888887765443
No 364
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=80.24 E-value=8 Score=44.06 Aligned_cols=136 Identities=15% Similarity=0.157 Sum_probs=80.1
Q ss_pred CCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh-Cc-----h-hhcccceeccchhhcc---HHH
Q 006894 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-IP-----V-EAQHNLVLSTSYAAHK---TEQ 528 (627)
Q Consensus 461 ~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~-~~-----~-~~~~~lv~~~~~~~a~---~e~ 528 (627)
-..++|.|+|.- .||+++|+.|...|.+|+. ++..+-.....+ .. + -.+.++|....-.... ..-
T Consensus 252 LaGKtVgVIG~G---~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~~leell~~ADIVI~atGt~~iI~~e~~ 328 (476)
T PTZ00075 252 IAGKTVVVCGYG---DVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVVTLEDVVETADIFVTATGNKDIITLEHM 328 (476)
T ss_pred cCCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceeccHHHHHhcCCEEEECCCcccccCHHHH
Confidence 356789999966 8999999999999999988 343332111111 00 0 0122333111111111 345
Q ss_pred hcCCCCcEEeeCcCCCCc----CCC--CCeeE---------eccC---cccc--CCCccccccccccccchhHHHHHHhH
Q 006894 529 ARAPKGTIFIPYTQIPPR----KLR--KDCFY---------HSTP---AMII--PPSLSNMHSCENWLGRRVMSAWRIAG 588 (627)
Q Consensus 529 ~~a~~G~~~~~~sq~P~~----~~R--~dc~~---------~~~p---~~~~--P~~~~~~~~~e~~~pr~~~~Ac~a~~ 588 (627)
+.+++|++++.++-+... .++ .|.-. ...| .+.+ -|.+-|+. |-.|.|..+|+--++--
T Consensus 329 ~~MKpGAiLINvGr~d~Ei~i~aL~~~~~vdv~evep~v~~~~~~~g~~i~llaeGrlvNl~-~~~GhP~~vMd~sfa~Q 407 (476)
T PTZ00075 329 RRMKNNAIVGNIGHFDNEIQVAELEAYPGIEIVEIKPQVDRYTFPDGKGIILLAEGRLVNLG-CATGHPSFVMSNSFTNQ 407 (476)
T ss_pred hccCCCcEEEEcCCCchHHhHHHHHhcCCceeecccCCCCeEEeCCCCEEEEEeCCCccccC-CCCCCCeeEeeHHHHHH
Confidence 788999999999843211 122 12222 1121 1111 34577787 88899999999888877
Q ss_pred HHhhhcCCCCCc
Q 006894 589 IIHALEGWDLNE 600 (627)
Q Consensus 589 ~~~alEg~~~~e 600 (627)
.+-.++=|..++
T Consensus 408 ~la~~~l~~~~~ 419 (476)
T PTZ00075 408 VLAQIELWENRD 419 (476)
T ss_pred HHHHHHHHhccC
Confidence 777777665544
No 365
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=80.13 E-value=12 Score=41.80 Aligned_cols=97 Identities=13% Similarity=0.045 Sum_probs=59.6
Q ss_pred ceeecCChhHHHHHHhcCC--CCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh-Cc---h-h--
Q 006894 442 IKVVDGSSLAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-IP---V-E-- 510 (627)
Q Consensus 442 irvv~Gnsltaavv~~~ip--~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~-~~---~-~-- 510 (627)
-|.=+|.|.. -.+.+... ...++|+|+|+- .||+.+|+.+...|.+|++ +++.|.+.-+.. .. . +
T Consensus 180 n~~g~g~s~~-~~i~r~t~~~l~GktVvViG~G---~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~~~~e~v 255 (413)
T cd00401 180 NLYGCRESLI-DGIKRATDVMIAGKVAVVAGYG---DVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVMTMEEAV 255 (413)
T ss_pred ccchhchhhH-HHHHHhcCCCCCCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEccHHHHH
Confidence 3444677743 44444432 356789999998 9999999999889999988 676676544332 10 0 0
Q ss_pred hcccce-eccchhhcc-H-HHhcCCCCcEEeeCcC
Q 006894 511 AQHNLV-LSTSYAAHK-T-EQARAPKGTIFIPYTQ 542 (627)
Q Consensus 511 ~~~~lv-~~~~~~~a~-~-e~~~a~~G~~~~~~sq 542 (627)
.+.++| ..+.-.... . ..+.+++|++++.+..
T Consensus 256 ~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~ 290 (413)
T cd00401 256 KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGH 290 (413)
T ss_pred cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCC
Confidence 122333 222222222 2 2578899999987773
No 366
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=79.69 E-value=6.1 Score=42.56 Aligned_cols=68 Identities=19% Similarity=0.209 Sum_probs=55.0
Q ss_pred ceeecCChhHHHHHHhcC--CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCchhh
Q 006894 442 IKVVDGSSLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA 511 (627)
Q Consensus 442 irvv~Gnsltaavv~~~i--p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~ 511 (627)
..+.-+.++||++.+.+| |++-++|+|-||.| .||+.+-+.---.|-+|.= -++|+..-|+++..-..
T Consensus 131 lg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsG--AvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~ 202 (343)
T KOG1196|consen 131 LGLLGMPGLTAYAGFYEICSPKKGETVFVSAASG--AVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDD 202 (343)
T ss_pred hhccCCchhHHHHHHHHhcCCCCCCEEEEeeccc--hhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCcc
Confidence 566778899999999999 77779999999999 9999887744346777766 78888888888876654
No 367
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=79.61 E-value=4.5 Score=42.64 Aligned_cols=58 Identities=19% Similarity=0.166 Sum_probs=43.3
Q ss_pred hHHHHHHhcC--CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch
Q 006894 450 LAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 450 ltaavv~~~i--p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 509 (627)
+||+..+... .+....|++.|++| -||.++++++..+|.+|.. +++++.+.+++++..
T Consensus 137 ~tA~~~l~~~~~~~~g~~VlI~Ga~G--~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa 198 (338)
T cd08295 137 LTAYAGFYEVCKPKKGETVFVSAASG--AVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGF 198 (338)
T ss_pred HHHHHHHHHhcCCCCCCEEEEecCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC
Confidence 5555555433 23456899999998 9999999877788999876 788888888764443
No 368
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=79.23 E-value=4 Score=47.93 Aligned_cols=31 Identities=19% Similarity=0.215 Sum_probs=27.6
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhcc-CceEEe
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQM-GIKVAT 494 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~-~~~v~l 494 (627)
..++|+|+|+|| =||+.+++.|.++ |.+|..
T Consensus 314 ~~~~VLVTGatG--FIGs~Lv~~Ll~~~g~~V~~ 345 (660)
T PRK08125 314 RRTRVLILGVNG--FIGNHLTERLLRDDNYEVYG 345 (660)
T ss_pred cCCEEEEECCCc--hHHHHHHHHHHhCCCcEEEE
Confidence 466899999999 9999999999975 788886
No 369
>KOG1370 consensus S-adenosylhomocysteine hydrolase [Coenzyme transport and metabolism]
Probab=79.19 E-value=6.2 Score=42.58 Aligned_cols=144 Identities=15% Similarity=0.186 Sum_probs=88.7
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEecchhhhHHHHhhCchh---------hcccceeccchhhcc----HHHh
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPVE---------AQHNLVLSTSYAAHK----TEQA 529 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~~---------~~~~lv~~~~~~~a~----~e~~ 529 (627)
-+.++++|- | +||.-||.+|--.|-+|.+..-|..-.||..+..- ++.+ +.+|.--..+ .--+
T Consensus 214 GKv~Vv~GY-G--dVGKgCaqaLkg~g~~VivTEiDPI~ALQAaMeG~~V~tm~ea~~e~d-ifVTtTGc~dii~~~H~~ 289 (434)
T KOG1370|consen 214 GKVAVVCGY-G--DVGKGCAQALKGFGARVIVTEIDPICALQAAMEGYEVTTLEEAIREVD-IFVTTTGCKDIITGEHFD 289 (434)
T ss_pred ccEEEEecc-C--ccchhHHHHHhhcCcEEEEeccCchHHHHHHhhccEeeeHHHhhhcCC-EEEEccCCcchhhHHHHH
Confidence 345555555 4 99999999999899999996667777777543220 1112 1222110000 2247
Q ss_pred cCCCCcEEeeCcCCCCc--------------CCC--CCeeEec-cCcccc--CCCccccccccccccchhHHHHHHhHHH
Q 006894 530 RAPKGTIFIPYTQIPPR--------------KLR--KDCFYHS-TPAMII--PPSLSNMHSCENWLGRRVMSAWRIAGII 590 (627)
Q Consensus 530 ~a~~G~~~~~~sq~P~~--------------~~R--~dc~~~~-~p~~~~--P~~~~~~~~~e~~~pr~~~~Ac~a~~~~ 590 (627)
.+|.++++|..-+|--+ ..| -|-.... +-.+.+ .+.+-|+. |-.+.|.=+||-.+.--++
T Consensus 290 ~mk~d~IvCN~Ghfd~EiDv~~L~~~~~~~~~vk~QvD~~~~~~gr~iIlLAeGRLvNL~-CatghpSFvmS~sftnQvl 368 (434)
T KOG1370|consen 290 QMKNDAIVCNIGHFDTEIDVKWLNTPALTWENVKPQVDRYILPNGKHIILLAEGRLVNLG-CATGHPSFVMSNSFTNQVL 368 (434)
T ss_pred hCcCCcEEeccccccceeehhhccCCcceeeecccccceeeccCCcEEEEEecCceeecc-cccCCCceEEecchHHHHH
Confidence 78999999966654311 111 1111111 111111 45677887 9999999999999998899
Q ss_pred hhhcCCCCCc----cch-h-hhhHHHH
Q 006894 591 HALEGWDLNE----CGQ-T-MCDIHQV 611 (627)
Q Consensus 591 ~alEg~~~~e----~G~-i-v~~i~~i 611 (627)
.-+|=|++.+ .|- . ..++|+-
T Consensus 369 AqIeLwt~p~~kY~~~V~~LPKklDE~ 395 (434)
T KOG1370|consen 369 AQIELWTAPEGKYKVGVYVLPKKLDEY 395 (434)
T ss_pred HHHHHhcCCCCccccceEecchhhHHH
Confidence 9999999885 443 3 3777763
No 370
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=79.01 E-value=1.9 Score=44.35 Aligned_cols=28 Identities=18% Similarity=0.328 Sum_probs=26.2
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
+|+++|+|| .||+++++.|.++|.+|.+
T Consensus 1 kvlV~GatG--~iG~~l~~~l~~~g~~V~~ 28 (328)
T TIGR01179 1 KILVTGGAG--YIGSHTVRQLLESGHEVVV 28 (328)
T ss_pred CEEEeCCCC--HHHHHHHHHHHhCCCeEEE
Confidence 489999999 9999999999999999887
No 371
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=78.99 E-value=2.5 Score=47.17 Aligned_cols=62 Identities=26% Similarity=0.263 Sum_probs=45.6
Q ss_pred ceeecCChhHHHHHHhc-CCCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHh
Q 006894 442 IKVVDGSSLAAAVVVNS-LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (627)
Q Consensus 442 irvv~Gnsltaavv~~~-ip~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 505 (627)
++.++|.+--+++-.-. -......|+|+|||| ++|+-+++-|-++|..|-. |++++=+++-.
T Consensus 57 ~~~~~~~~~e~~v~~~~~~~~~~~~VlVvGatG--~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~ 121 (411)
T KOG1203|consen 57 ISPVTGTTSEAEVSPPNNNSKKPTTVLVVGATG--KVGRRIVKILLKRGFSVRALVRDEQKAEDLLG 121 (411)
T ss_pred CCccccccceeeeccCCCCCCCCCeEEEecCCC--chhHHHHHHHHHCCCeeeeeccChhhhhhhhc
Confidence 46666665555443222 233577999999999 9999999999999988877 88887666654
No 372
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=78.72 E-value=5.3 Score=42.17 Aligned_cols=96 Identities=14% Similarity=0.162 Sum_probs=62.3
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh-Cch--h-----hcccceecc--ch---hhccH---
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-IPV--E-----AQHNLVLST--SY---AAHKT--- 526 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~-~~~--~-----~~~~lv~~~--~~---~~a~~--- 526 (627)
+|.++|.. .+|.++|+.|.+.|.+|.. |++++.++++++ +.. + .+.++|.+. +. ++...
T Consensus 3 ~Ig~IGlG---~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g~~~~~s~~~~~~~aDvVi~~vp~~~~~~~vl~~~~ 79 (296)
T PRK15461 3 AIAFIGLG---QMGSPMASNLLKQGHQLQVFDVNPQAVDALVDKGATPAASPAQAAAGAEFVITMLPNGDLVRSVLFGEN 79 (296)
T ss_pred eEEEEeeC---HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCcccCCHHHHHhcCCEEEEecCCHHHHHHHHcCcc
Confidence 68889866 9999999999999999988 888888888754 111 1 223333211 11 11111
Q ss_pred -HHhcCCCCcEEeeCcCCCCc-------CCC-CCeeEeccCccccC
Q 006894 527 -EQARAPKGTIFIPYTQIPPR-------KLR-KDCFYHSTPAMIIP 563 (627)
Q Consensus 527 -e~~~a~~G~~~~~~sq~P~~-------~~R-~dc~~~~~p~~~~P 563 (627)
-...+++|++++|.|-.+|. .++ +.+.|.+.|.+..|
T Consensus 80 ~i~~~l~~g~lvid~sT~~p~~~~~l~~~l~~~g~~~ldapV~g~~ 125 (296)
T PRK15461 80 GVCEGLSRDALVIDMSTIHPLQTDKLIADMQAKGFSMMDVPVGRTS 125 (296)
T ss_pred cHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCcEEEccCCCCH
Confidence 02347899999999976654 122 56777777777544
No 373
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=78.69 E-value=3.4 Score=42.11 Aligned_cols=45 Identities=18% Similarity=0.186 Sum_probs=36.3
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 509 (627)
.+-++++|+.. -||+|||+.|+++|.+|.. ++.+.-+.-...++.
T Consensus 14 sk~~~vtGg~s--GIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g 60 (256)
T KOG1200|consen 14 SKVAAVTGGSS--GIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG 60 (256)
T ss_pred cceeEEecCCc--hHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC
Confidence 45667888884 9999999999999999999 566666666666666
No 374
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=78.62 E-value=2.7 Score=44.66 Aligned_cols=36 Identities=14% Similarity=0.194 Sum_probs=28.9
Q ss_pred cEEEEeccCCChhhHHHHHHHHhcc-CceEEe--cchhhhH
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYE 501 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~-~~~v~l--~~~~~~~ 501 (627)
++|+|+|||| =||+.+|+.|.++ |.+|.. |+.++..
T Consensus 2 ~~ilVtGatG--fiGs~l~~~L~~~~~~~V~~~~r~~~~~~ 40 (347)
T PRK11908 2 KKVLILGVNG--FIGHHLSKRILETTDWEVYGMDMQTDRLG 40 (347)
T ss_pred cEEEEECCCc--HHHHHHHHHHHhCCCCeEEEEeCcHHHHH
Confidence 4699999999 9999999999865 688886 5554433
No 375
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=78.62 E-value=7.4 Score=39.76 Aligned_cols=53 Identities=19% Similarity=0.135 Sum_probs=39.3
Q ss_pred hHHHHHHhcCC--CCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHH
Q 006894 450 LAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (627)
Q Consensus 450 ltaavv~~~ip--~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~ 504 (627)
+||+..+..+- +....|++.|++| .+|.++++.+..+|.+|.. +++++.+.++
T Consensus 128 ~ta~~~l~~~~~~~~g~~vlV~ga~g--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 184 (320)
T cd08243 128 YTAWGSLFRSLGLQPGDTLLIRGGTS--SVGLAALKLAKALGATVTATTRSPERAALLK 184 (320)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCC--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 44555554442 2346999999998 9999999988889999877 6777766663
No 376
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=78.60 E-value=2 Score=45.64 Aligned_cols=28 Identities=11% Similarity=0.190 Sum_probs=25.2
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEE
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVA 493 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~ 493 (627)
++|+|+|+|| -||+++|+.|+++|.+++
T Consensus 2 ~~vlVtGatG--fIG~~l~~~L~~~g~~~v 29 (355)
T PRK10217 2 RKILITGGAG--FIGSALVRYIINETSDAV 29 (355)
T ss_pred cEEEEEcCCc--HHHHHHHHHHHHcCCCEE
Confidence 5799999999 999999999999987754
No 377
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=78.40 E-value=2.5 Score=47.28 Aligned_cols=31 Identities=16% Similarity=0.220 Sum_probs=28.4
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
...+|+|+|+|| -||+.+++.|.++|.+|..
T Consensus 119 ~~mkILVTGatG--FIGs~Lv~~Ll~~G~~V~~ 149 (436)
T PLN02166 119 KRLRIVVTGGAG--FVGSHLVDKLIGRGDEVIV 149 (436)
T ss_pred CCCEEEEECCcc--HHHHHHHHHHHHCCCEEEE
Confidence 456899999999 9999999999999999887
No 378
>PLN02206 UDP-glucuronate decarboxylase
Probab=78.38 E-value=2.4 Score=47.57 Aligned_cols=30 Identities=20% Similarity=0.215 Sum_probs=27.9
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
.++|+|+|+|| -||+.+++.|.++|.+|..
T Consensus 119 ~~kILVTGatG--fIGs~Lv~~Ll~~G~~V~~ 148 (442)
T PLN02206 119 GLRVVVTGGAG--FVGSHLVDRLMARGDSVIV 148 (442)
T ss_pred CCEEEEECccc--HHHHHHHHHHHHCcCEEEE
Confidence 46799999999 9999999999999999987
No 379
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=78.35 E-value=7.4 Score=40.21 Aligned_cols=42 Identities=17% Similarity=0.148 Sum_probs=34.8
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHh
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 505 (627)
....|++.|+.| -+|.++++.+..+|.++.. +++++.+.+++
T Consensus 140 ~~~~vlI~ga~g--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 183 (334)
T PTZ00354 140 KGQSVLIHAGAS--GVGTAAAQLAEKYGAATIITTSSEEKVDFCKK 183 (334)
T ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 346899999998 9999999988889998766 78888877743
No 380
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=78.25 E-value=8.7 Score=39.57 Aligned_cols=40 Identities=23% Similarity=0.326 Sum_probs=32.6
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHH
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~ 504 (627)
...|++.|++| .+|.++++....+|.+|.. +++++.+.++
T Consensus 147 ~~~vlI~g~~g--~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 188 (325)
T cd05280 147 DGPVLVTGATG--GVGSIAVAILAKLGYTVVALTGKEEQADYLK 188 (325)
T ss_pred CCEEEEECCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 45899999998 9999998876678999876 7777777663
No 381
>PLN02572 UDP-sulfoquinovose synthase
Probab=77.99 E-value=2.2 Score=47.64 Aligned_cols=30 Identities=27% Similarity=0.234 Sum_probs=27.9
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
.++|+|+||+| =||+.+|+.|.++|.+|.+
T Consensus 47 ~k~VLVTGatG--fIGs~Lv~~L~~~G~~V~~ 76 (442)
T PLN02572 47 KKKVMVIGGDG--YCGWATALHLSKRGYEVAI 76 (442)
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHCCCeEEE
Confidence 45799999999 9999999999999999887
No 382
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=77.79 E-value=7.4 Score=37.56 Aligned_cols=40 Identities=20% Similarity=0.274 Sum_probs=29.8
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHh
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 505 (627)
.++|+|+|+- .+|...++.|.+.|.+|+. .+.++.++++.
T Consensus 20 p~~vvv~G~G---~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~ 61 (168)
T PF01262_consen 20 PAKVVVTGAG---RVGQGAAEIAKGLGAEVVVPDERPERLRQLES 61 (168)
T ss_dssp T-EEEEESTS---HHHHHHHHHHHHTT-EEEEEESSHHHHHHHHH
T ss_pred CeEEEEECCC---HHHHHHHHHHhHCCCEEEeccCCHHHHHhhhc
Confidence 4688888865 9999999999999999998 55555555543
No 383
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=77.74 E-value=2.1 Score=44.45 Aligned_cols=27 Identities=15% Similarity=0.306 Sum_probs=23.9
Q ss_pred EEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 466 VLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 466 V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
|+|+|||| =||+.+|+.|.++|.++..
T Consensus 2 ilVtGa~G--fiG~~l~~~L~~~g~~~v~ 28 (308)
T PRK11150 2 IIVTGGAG--FIGSNIVKALNDKGITDIL 28 (308)
T ss_pred EEEecCCc--HHHHHHHHHHHhCCCceEE
Confidence 79999999 9999999999999985443
No 384
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=77.63 E-value=2.7 Score=44.87 Aligned_cols=31 Identities=13% Similarity=0.174 Sum_probs=28.1
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
..++|+|+|+|| =||+.+++.|.++|.+|+.
T Consensus 14 ~~~~vlVtGatG--fiG~~lv~~L~~~g~~V~~ 44 (348)
T PRK15181 14 APKRWLITGVAG--FIGSGLLEELLFLNQTVIG 44 (348)
T ss_pred cCCEEEEECCcc--HHHHHHHHHHHHCCCEEEE
Confidence 346899999999 9999999999999998876
No 385
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=77.59 E-value=6.2 Score=42.03 Aligned_cols=40 Identities=18% Similarity=0.077 Sum_probs=34.5
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 506 (627)
.+|.++|+- .+|.++|..|++.|.+|++ |++++.+.+++.
T Consensus 5 m~I~iIG~G---~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~ 46 (328)
T PRK14618 5 MRVAVLGAG---AWGTALAVLAASKGVPVRLWARRPEFAAALAAE 46 (328)
T ss_pred CeEEEECcC---HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHh
Confidence 478999986 9999999999999999999 877887777753
No 386
>PLN02240 UDP-glucose 4-epimerase
Probab=77.54 E-value=2.5 Score=44.59 Aligned_cols=29 Identities=21% Similarity=0.288 Sum_probs=27.2
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
++|+++|+|| -||+++++.|.++|.+|+.
T Consensus 6 ~~vlItGatG--~iG~~l~~~L~~~g~~V~~ 34 (352)
T PLN02240 6 RTILVTGGAG--YIGSHTVLQLLLAGYKVVV 34 (352)
T ss_pred CEEEEECCCC--hHHHHHHHHHHHCCCEEEE
Confidence 5799999999 9999999999999999887
No 387
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=77.48 E-value=6.3 Score=41.79 Aligned_cols=29 Identities=21% Similarity=0.314 Sum_probs=24.9
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
..+|.++| .| .||+.+|+.|.++|..+.+
T Consensus 3 ~~~v~IvG-~G--liG~s~a~~l~~~g~~v~i 31 (279)
T COG0287 3 SMKVGIVG-LG--LMGGSLARALKEAGLVVRI 31 (279)
T ss_pred CcEEEEEC-Cc--hHHHHHHHHHHHcCCeEEE
Confidence 35677777 77 9999999999999999966
No 388
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=77.39 E-value=24 Score=39.48 Aligned_cols=152 Identities=13% Similarity=0.056 Sum_probs=84.6
Q ss_pred ceeecCChhHHHHHHhcC--CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh-C---c-hh--
Q 006894 442 IKVVDGSSLAAAVVVNSL--PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-I---P-VE-- 510 (627)
Q Consensus 442 irvv~Gnsltaavv~~~i--p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~-~---~-~~-- 510 (627)
-|.=+|.|..- .+.+.. ....++|+|+|.- .||+.+|+.|...|.+|+. +++.|....... . + ++
T Consensus 173 n~yg~g~s~~~-~i~r~t~~~l~Gk~VvViG~G---~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~v~~leeal 248 (406)
T TIGR00936 173 NRYGTGQSTID-GILRATNLLIAGKTVVVAGYG---WCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAA 248 (406)
T ss_pred cccccchhHHH-HHHHhcCCCCCcCEEEEECCC---HHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCEeCCHHHHH
Confidence 35556666433 344432 3456799999976 9999999999989999988 455543222111 0 0 00
Q ss_pred hcccce-eccchhhcc--HHHhcCCCCcEEeeCcCCCCc--------------CCCCCeeEeccCc---c-cc-CCCccc
Q 006894 511 AQHNLV-LSTSYAAHK--TEQARAPKGTIFIPYTQIPPR--------------KLRKDCFYHSTPA---M-II-PPSLSN 568 (627)
Q Consensus 511 ~~~~lv-~~~~~~~a~--~e~~~a~~G~~~~~~sq~P~~--------------~~R~dc~~~~~p~---~-~~-P~~~~~ 568 (627)
.+.++| ..|.-.... ..-..+++|++++-++.++.. +.|.....-..|. + .+ -|.+-|
T Consensus 249 ~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~~eId~~aL~~~~~~~~~~~~~v~~~~~~~g~~i~ll~~GrlvN 328 (406)
T TIGR00936 249 KIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFDVEIDVKALEELAVEKRNVRPQVDEYILKDGRRIYLLAEGRLVN 328 (406)
T ss_pred hcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCCceeCHHHHHHHHhhccccccceEEEEeCCCCEEEEEeCCceec
Confidence 122332 222111111 234789999999988744420 2343332222221 1 11 345666
Q ss_pred cccccccccchhHHHHHHhHHHhhhcCCCC
Q 006894 569 MHSCENWLGRRVMSAWRIAGIIHALEGWDL 598 (627)
Q Consensus 569 ~~~~e~~~pr~~~~Ac~a~~~~~alEg~~~ 598 (627)
+- |..+.|..+|.--+|-=.+-+++=+.+
T Consensus 329 l~-~~~ghp~~vmd~sfa~q~la~~~l~~~ 357 (406)
T TIGR00936 329 LA-AAEGHPSEVMDMSFANQALAAEYLWKN 357 (406)
T ss_pred cc-CCCCCcceeeCHHHHHHHHHHHHHHhc
Confidence 76 888999999976555444444444443
No 389
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=77.23 E-value=4.5 Score=35.88 Aligned_cols=39 Identities=23% Similarity=0.285 Sum_probs=32.5
Q ss_pred EEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 466 V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
|+++|.. .+|+.+++.|.+++.+|++ +++++.++++++-
T Consensus 1 vvI~G~g---~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~ 41 (116)
T PF02254_consen 1 VVIIGYG---RIGREIAEQLKEGGIDVVVIDRDPERVEELREEG 41 (116)
T ss_dssp EEEES-S---HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTT
T ss_pred eEEEcCC---HHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcc
Confidence 6789987 9999999999998878888 8888888887663
No 390
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=76.88 E-value=3.4 Score=43.33 Aligned_cols=38 Identities=11% Similarity=0.204 Sum_probs=32.9
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHH
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~ 504 (627)
++|.++|+. .+|+++|..|++.|.+|++ +++++.++.+
T Consensus 4 ~~I~ViGaG---~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~ 43 (291)
T PRK06035 4 KVIGVVGSG---VMGQGIAQVFARTGYDVTIVDVSEEILKNAM 43 (291)
T ss_pred cEEEEECcc---HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHH
Confidence 579999996 9999999999999999999 7777776543
No 391
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=76.61 E-value=3 Score=41.32 Aligned_cols=28 Identities=18% Similarity=0.303 Sum_probs=24.3
Q ss_pred EEEEeccCCChhhHHHHHHHHhcc--CceEEe
Q 006894 465 HVLLRGTVTANKVANAVASSLCQM--GIKVAT 494 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~--~~~v~l 494 (627)
+|+++|++| -||+++|+.|+++ ++++..
T Consensus 2 ~vlItGas~--gIG~~ia~~l~~~~~~~~v~~ 31 (235)
T PRK09009 2 NILIVGGSG--GIGKAMVKQLLERYPDATVHA 31 (235)
T ss_pred EEEEECCCC--hHHHHHHHHHHHhCCCCEEEE
Confidence 689999998 9999999999987 566655
No 392
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=76.42 E-value=3.2 Score=45.09 Aligned_cols=118 Identities=14% Similarity=0.178 Sum_probs=66.4
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhc---cCceEEe----cchhhhHHHHh------hCchh--hcccceec-cchh-hcc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQ---MGIKVAT----ICKDDYEKLKL------RIPVE--AQHNLVLS-TSYA-AHK 525 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~---~~~~v~l----~~~~~~~~l~~------~~~~~--~~~~lv~~-~~~~-~a~ 525 (627)
+-+|.++|||| -+|..+.+.|.+ ...++.. ++..+--.++. ++.+. .+.++|+. +.-. .+.
T Consensus 4 ~~~vaIvGATG--~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~~~~~~~~v~~~~~~~~~~~Dvvf~a~p~~~s~~ 81 (336)
T PRK08040 4 GWNIALLGATG--AVGEALLELLAERQFPVGELYALASEESAGETLRFGGKSVTVQDAAEFDWSQAQLAFFVAGREASAA 81 (336)
T ss_pred CCEEEEEccCC--HHHHHHHHHHhcCCCCceEEEEEEccCcCCceEEECCcceEEEeCchhhccCCCEEEECCCHHHHHH
Confidence 45899999999 999999999997 4666655 22221111111 11111 23444432 2222 222
Q ss_pred HHHhcCCCCcEEeeCcCCCCc-CCCCCeeEeccCccccCCC----ccccccccccccchhHH-H-HHHhHHHhhhcCCC
Q 006894 526 TEQARAPKGTIFIPYTQIPPR-KLRKDCFYHSTPAMIIPPS----LSNMHSCENWLGRRVMS-A-WRIAGIIHALEGWD 597 (627)
Q Consensus 526 ~e~~~a~~G~~~~~~sq~P~~-~~R~dc~~~~~p~~~~P~~----~~~~~~~e~~~pr~~~~-A-c~a~~~~~alEg~~ 597 (627)
..++-++.|+.++|-| .. .+++|. | +.+|+- ++.+. .++.+. + |.+-+++++|.-..
T Consensus 82 ~~~~~~~~g~~VIDlS---~~fRl~~~v-----P-~~lPEvn~~~l~~i~------~~~iIAnPgC~~t~~~laL~PL~ 145 (336)
T PRK08040 82 YAEEATNAGCLVIDSS---GLFALEPDV-----P-LVVPEVNPFVLADYR------NRNIIAVADSLTSQLLTAIKPLI 145 (336)
T ss_pred HHHHHHHCCCEEEECC---hHhcCCCCC-----c-eEccccCHHHHhhhc------cCCEEECCCHHHHHHHHHHHHHH
Confidence 3334456899999998 66 666664 3 445552 12111 122322 2 99999999886543
No 393
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=76.27 E-value=3.9 Score=43.83 Aligned_cols=45 Identities=24% Similarity=0.325 Sum_probs=35.2
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCc--eEEe--cchhhhHHHHhhCch
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~~~~ 509 (627)
...+|.++|| | .||+++|..|+.+|+ ++.| +++++.+-...++..
T Consensus 5 ~~~ki~iiGa-G--~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~ 53 (315)
T PRK00066 5 QHNKVVLVGD-G--AVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSH 53 (315)
T ss_pred CCCEEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHh
Confidence 3459999999 8 999999999998877 6777 777777666655443
No 394
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=76.27 E-value=2.8 Score=48.14 Aligned_cols=41 Identities=24% Similarity=0.395 Sum_probs=36.3
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 506 (627)
+.+|.+||.. ++|+.+|+.|.++|.++++ .|+|+.++++++
T Consensus 417 ~~hiiI~G~G---~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~ 459 (558)
T PRK10669 417 CNHALLVGYG---RVGSLLGEKLLAAGIPLVVIETSRTRVDELRER 459 (558)
T ss_pred CCCEEEECCC---hHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHC
Confidence 6799999998 9999999999999999988 788888888753
No 395
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=76.23 E-value=8.9 Score=38.87 Aligned_cols=41 Identities=17% Similarity=0.203 Sum_probs=33.5
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHH
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~ 504 (627)
....|++.|++| .+|.++++.+...|.+|.. ++.++.+.++
T Consensus 139 ~~~~vli~g~~~--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 181 (323)
T cd08241 139 PGETVLVLGAAG--GVGLAAVQLAKALGARVIAAASSEEKLALAR 181 (323)
T ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHhCCEEEEEeCCHHHHHHHH
Confidence 346899999987 9999999988889999877 6667766654
No 396
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=76.15 E-value=6.8 Score=40.60 Aligned_cols=44 Identities=14% Similarity=0.132 Sum_probs=35.9
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
..+|++.|++| .+|.++++.+.+.|.++.. ++.++.+.+++++.
T Consensus 146 ~~~vlI~g~~g--~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g 191 (329)
T cd05288 146 GETVVVSAAAG--AVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELG 191 (329)
T ss_pred CCEEEEecCcc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcC
Confidence 46899999998 9999999988889999877 67777777765443
No 397
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=76.14 E-value=2.4 Score=43.43 Aligned_cols=28 Identities=11% Similarity=0.173 Sum_probs=24.9
Q ss_pred EEEEeccCCChhhHHHHHHHHhccC--ceEEe
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMG--IKVAT 494 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~--~~v~l 494 (627)
+|+++|+|| .||+++++.|.++| .+|+.
T Consensus 1 ~ilItGatG--~iG~~l~~~l~~~~~~~~v~~ 30 (317)
T TIGR01181 1 RILVTGGAG--FIGSNFVRYILNEHPDAEVIV 30 (317)
T ss_pred CEEEEcCCc--hHHHHHHHHHHHhCCCCEEEE
Confidence 489999999 99999999999876 77876
No 398
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=76.11 E-value=2.7 Score=42.98 Aligned_cols=28 Identities=18% Similarity=0.348 Sum_probs=26.1
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
+|+|+|+|| -||+++++.|.++|.+|..
T Consensus 1 kilv~G~tG--~iG~~l~~~l~~~g~~v~~ 28 (287)
T TIGR01214 1 RILITGANG--QLGRELVQQLSPEGRVVVA 28 (287)
T ss_pred CEEEEcCCC--HHHHHHHHHHHhcCCEEEE
Confidence 489999999 9999999999999999887
No 399
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=76.03 E-value=6.1 Score=42.35 Aligned_cols=44 Identities=23% Similarity=0.262 Sum_probs=33.9
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCc
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIP 508 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~ 508 (627)
.+.|+++|+.+ =+||++|+-++|+|-++.+ .|++-.++-.+++.
T Consensus 38 g~~vLITGgg~--GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~ 83 (300)
T KOG1201|consen 38 GEIVLITGGGS--GLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIR 83 (300)
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHH
Confidence 45778888886 9999999999999998877 66665555554433
No 400
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=75.99 E-value=5.1 Score=37.61 Aligned_cols=45 Identities=20% Similarity=0.220 Sum_probs=33.2
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe---cchhhhHHHHhhCchh
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT---ICKDDYEKLKLRIPVE 510 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l---~~~~~~~~l~~~~~~~ 510 (627)
+-+|-++|+ | |||.+++++|.+.|..|.- |+.+.-++++.+++..
T Consensus 10 ~l~I~iIGa-G--rVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~ 57 (127)
T PF10727_consen 10 RLKIGIIGA-G--RVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAG 57 (127)
T ss_dssp --EEEEECT-S--CCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-
T ss_pred ccEEEEECC-C--HHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccc
Confidence 448999999 4 9999999999999998866 7777777777766553
No 401
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=75.87 E-value=3.8 Score=42.90 Aligned_cols=39 Identities=21% Similarity=0.185 Sum_probs=33.7
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHh
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 505 (627)
++|.++|+- .+|+++|..|++.|.+|++ +++++.++.++
T Consensus 5 ~kI~vIGaG---~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 45 (292)
T PRK07530 5 KKVGVIGAG---QMGNGIAHVCALAGYDVLLNDVSADRLEAGLA 45 (292)
T ss_pred CEEEEECCc---HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence 579999996 9999999999999999999 88887776543
No 402
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=75.60 E-value=7.1 Score=40.29 Aligned_cols=41 Identities=20% Similarity=0.195 Sum_probs=34.3
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHH
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~ 504 (627)
....|++.|++| .+|.++++.+...|.++.. ++.++.+.++
T Consensus 162 ~~~~vlI~ga~g--~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 204 (332)
T cd08259 162 KGDTVLVTGAGG--GVGIHAIQLAKALGARVIAVTRSPEKLKILK 204 (332)
T ss_pred CCCEEEEECCCC--HHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH
Confidence 345899999998 9999999999999999877 7777766664
No 403
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=75.51 E-value=8.8 Score=40.10 Aligned_cols=80 Identities=14% Similarity=0.196 Sum_probs=52.2
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh-Cc--h---h--hcccceecc-c----hhhcc--H
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-IP--V---E--AQHNLVLST-S----YAAHK--T 526 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~-~~--~---~--~~~~lv~~~-~----~~~a~--~ 526 (627)
.+|.++|. | .+|+++|+.|.+.|.+|.. |++++.+.+++. +. . + .+.++|.+. . .++.. .
T Consensus 3 ~~IgviG~-G--~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~g~~~~~~~~e~~~~~d~vi~~vp~~~~~~~v~~~~ 79 (296)
T PRK11559 3 MKVGFIGL-G--IMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAGAETASTAKAVAEQCDVIITMLPNSPHVKEVALGE 79 (296)
T ss_pred ceEEEEcc-C--HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHcCc
Confidence 36899996 5 9999999999999999988 788877776543 11 0 1 223444222 1 11111 0
Q ss_pred H--HhcCCCCcEEeeCcCCCCc
Q 006894 527 E--QARAPKGTIFIPYTQIPPR 546 (627)
Q Consensus 527 e--~~~a~~G~~~~~~sq~P~~ 546 (627)
+ ...+++|++++|.|..+|.
T Consensus 80 ~~~~~~~~~g~iiid~st~~~~ 101 (296)
T PRK11559 80 NGIIEGAKPGTVVIDMSSIAPL 101 (296)
T ss_pred chHhhcCCCCcEEEECCCCCHH
Confidence 1 2457899999999876653
No 404
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=75.49 E-value=7.5 Score=40.81 Aligned_cols=44 Identities=11% Similarity=0.153 Sum_probs=36.3
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCc-eEEe--cchhhhHHHHhhCch
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~~~~ 509 (627)
..|++.|++| -||.++++.+...|. +|.. +++++.+.++++++.
T Consensus 156 ~~VlI~ga~g--~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa 202 (345)
T cd08293 156 QTMVVSGAAG--ACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGF 202 (345)
T ss_pred CEEEEECCCc--HHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCC
Confidence 7899999998 999999987777898 6766 788888888776554
No 405
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=75.44 E-value=4.8 Score=40.26 Aligned_cols=43 Identities=21% Similarity=0.227 Sum_probs=36.3
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~ 507 (627)
..++|.+.|.. ++|+++|+.|.+.|.+|+. ++.++.+.++++.
T Consensus 27 ~gk~v~I~G~G---~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~ 71 (200)
T cd01075 27 EGKTVAVQGLG---KVGYKLAEHLLEEGAKLIVADINEEAVARAAELF 71 (200)
T ss_pred CCCEEEEECCC---HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence 35689999994 9999999999999999999 7777777776654
No 406
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=75.15 E-value=4.5 Score=42.35 Aligned_cols=40 Identities=25% Similarity=0.307 Sum_probs=34.1
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 506 (627)
++|.++|+. .+|+++|..|++.|.+|++ ++++..++.++.
T Consensus 4 ~kIaViGaG---~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~ 45 (287)
T PRK08293 4 KNVTVAGAG---VLGSQIAFQTAFHGFDVTIYDISDEALEKAKER 45 (287)
T ss_pred cEEEEECCC---HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHH
Confidence 579999985 9999999999999999999 777777766543
No 407
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=74.58 E-value=11 Score=37.33 Aligned_cols=41 Identities=20% Similarity=0.224 Sum_probs=32.7
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHH
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~ 504 (627)
....|++.|++| .+|.++++.+..+|+++.. ++.++.+.++
T Consensus 108 ~g~~vlv~g~~g--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 150 (293)
T cd05195 108 KGESVLIHAAAG--GVGQAAIQLAQHLGAEVFATVGSEEKREFLR 150 (293)
T ss_pred CCCEEEEecCCC--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 446899999998 9999999888888999887 5656666554
No 408
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=74.47 E-value=10 Score=42.26 Aligned_cols=39 Identities=10% Similarity=0.116 Sum_probs=34.6
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHh
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 505 (627)
.+|.++|.. -+|...|..|+++|.+|+. +++++.+.++.
T Consensus 4 ~kI~VIGlG---~~G~~~A~~La~~G~~V~~~D~~~~~v~~l~~ 44 (415)
T PRK11064 4 ETISVIGLG---YIGLPTAAAFASRQKQVIGVDINQHAVDTINR 44 (415)
T ss_pred cEEEEECcc---hhhHHHHHHHHhCCCEEEEEeCCHHHHHHHHC
Confidence 579999985 9999999999999999998 88888888763
No 409
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=74.43 E-value=4.5 Score=42.34 Aligned_cols=40 Identities=13% Similarity=0.242 Sum_probs=34.8
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 506 (627)
++|.++|+- .+|+.+|..|++.|.+|++ +++++.++++++
T Consensus 2 ~~V~VIG~G---~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~ 43 (288)
T PRK09260 2 EKLVVVGAG---VMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQE 43 (288)
T ss_pred cEEEEECcc---HHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHH
Confidence 479999995 9999999999999999999 888888877643
No 410
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=74.25 E-value=13 Score=37.88 Aligned_cols=40 Identities=18% Similarity=0.161 Sum_probs=33.4
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHH
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~ 504 (627)
.+.|++.|++| .+|.++++.+..+|.++.. ++.++.+.++
T Consensus 145 ~~~vli~g~~~--~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~ 186 (328)
T cd08268 145 GDSVLITAASS--SVGLAAIQIANAAGATVIATTRTSEKRDALL 186 (328)
T ss_pred CCEEEEecCcc--HHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH
Confidence 46899999988 9999999988889999887 6777776664
No 411
>cd03514 CrtR_beta-carotene-hydroxylase Beta-carotene hydroxylase (CrtR), the carotenoid zeaxanthin biosynthetic enzyme catalyzes the addition of hydroxyl groups to the beta-ionone rings of beta-carotene to form zeaxanthin and is found in bacteria and red algae. Carotenoids are important natural pigments; zeaxanthin and lutein are the only dietary carotenoids that accumulate in the macular region of the retina and lens. It is proposed that these carotenoids protect ocular tissues against photooxidative damage. CrtR does not show overall amino acid sequence similarity to the beta-carotene hydroxylases similar to CrtZ, an astaxanthin biosynthetic beta-carotene hydroxylase. However, CrtR does show sequence similarity to the green alga, Haematococcus pluvialis, beta-carotene ketolase (CrtW), which converts beta-carotene to canthaxanthin. Sequences of the CrtR_beta-carotene-hydroxylase domain family, as well as, the CrtW_beta-carotene-ketolase domain family appear to be structurally related
Probab=74.04 E-value=27 Score=35.21 Aligned_cols=22 Identities=27% Similarity=0.410 Sum_probs=15.6
Q ss_pred cccccCChhhhhhhhcCCCCCc
Q 006894 239 LKFLMYTPSYHSLHHTQFRTNY 260 (627)
Q Consensus 239 L~~li~tp~~H~lHH~~~~~NY 260 (627)
++++...-.+|..||...+..+
T Consensus 167 ~~~l~~~~nyH~~HHL~P~IP~ 188 (207)
T cd03514 167 LNPLIMGQNYHLVHHLWPSIPW 188 (207)
T ss_pred HheeecCCchhHHHhCCCCCch
Confidence 3555556679999999876444
No 412
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=73.87 E-value=7.6 Score=40.64 Aligned_cols=42 Identities=19% Similarity=0.145 Sum_probs=34.6
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHh
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 505 (627)
....|++.|++| .||.++++.+..+|.+|.. +++++.+.+++
T Consensus 138 ~g~~VLI~ga~g--~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~ 181 (325)
T TIGR02825 138 GGETVMVNAAAG--AVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKK 181 (325)
T ss_pred CCCEEEEeCCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 456899999998 9999999877788999876 77888887753
No 413
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=73.79 E-value=4.8 Score=42.63 Aligned_cols=38 Identities=16% Similarity=0.094 Sum_probs=32.0
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHH
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~ 504 (627)
.+|.++| .| -+|+++|..|+++|.+|++ ++++..+..+
T Consensus 3 ~~V~VIG-~G--~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~ 42 (308)
T PRK06129 3 GSVAIIG-AG--LIGRAWAIVFARAGHEVRLWDADPAAAAAAP 42 (308)
T ss_pred cEEEEEC-cc--HHHHHHHHHHHHCCCeeEEEeCCHHHHHHHH
Confidence 3699999 55 9999999999999999999 7777666544
No 414
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=73.71 E-value=4.4 Score=44.69 Aligned_cols=38 Identities=16% Similarity=0.273 Sum_probs=33.9
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHh
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 505 (627)
+|+++|+ | .+|+++++.|+++|.+|.+ +++++.+++++
T Consensus 2 ~viIiG~-G--~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~ 41 (453)
T PRK09496 2 KIIIVGA-G--QVGYTLAENLSGENNDVTVIDTDEERLRRLQD 41 (453)
T ss_pred EEEEECC-C--HHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh
Confidence 6899998 6 9999999999999999988 88888888765
No 415
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]
Probab=73.68 E-value=4.9 Score=42.75 Aligned_cols=83 Identities=16% Similarity=0.179 Sum_probs=54.9
Q ss_pred HHHHHHhcCC-----CCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCchhhcccceeccchhh
Q 006894 451 AAAVVVNSLP-----KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLSTSYAA 523 (627)
Q Consensus 451 taavv~~~ip-----~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~lv~~~~~~~ 523 (627)
|++.|+.=++ -.-++|+++|... =||+=++..|..++..|++ ...+.+.+.- ++.+++-+---++
T Consensus 139 Tp~gi~~ll~~~~i~l~Gk~~vVVGrS~--iVGkPla~lL~~~naTVtvcHs~T~~l~~~~------k~ADIvv~AvG~p 210 (283)
T COG0190 139 TPAGIMTLLEEYGIDLRGKNVVVVGRSN--IVGKPLALLLLNANATVTVCHSRTKDLASIT------KNADIVVVAVGKP 210 (283)
T ss_pred CHHHHHHHHHHhCCCCCCCEEEEECCCC--cCcHHHHHHHHhCCCEEEEEcCCCCCHHHHh------hhCCEEEEecCCc
Confidence 4555544432 2578999999997 9999999999999999999 2222233221 2233332222222
Q ss_pred ccHHHhcCCCCcEEeeCc
Q 006894 524 HKTEQARAPKGTIFIPYT 541 (627)
Q Consensus 524 a~~e~~~a~~G~~~~~~s 541 (627)
......+.++|++++|+-
T Consensus 211 ~~i~~d~vk~gavVIDVG 228 (283)
T COG0190 211 HFIKADMVKPGAVVIDVG 228 (283)
T ss_pred cccccccccCCCEEEecC
Confidence 225578999999999987
No 416
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=73.44 E-value=4.6 Score=42.61 Aligned_cols=39 Identities=13% Similarity=0.153 Sum_probs=33.5
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHH
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~ 504 (627)
-++|.++|+- .+|+.+|..|++.|.+|++ ++++..++.+
T Consensus 5 ~~~V~ViGaG---~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~ 45 (286)
T PRK07819 5 IQRVGVVGAG---QMGAGIAEVCARAGVDVLVFETTEELATAGR 45 (286)
T ss_pred ccEEEEEccc---HHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence 3589999995 9999999999999999999 7888776633
No 417
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=73.40 E-value=5.3 Score=37.15 Aligned_cols=37 Identities=24% Similarity=0.319 Sum_probs=32.1
Q ss_pred EEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh
Q 006894 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (627)
Q Consensus 466 V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 506 (627)
|+++|+- .||+.+|-.|++.|.+|.+ |++ +++.++++
T Consensus 1 I~I~G~G---aiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~~~ 39 (151)
T PF02558_consen 1 ILIIGAG---AIGSLYAARLAQAGHDVTLVSRSP-RLEAIKEQ 39 (151)
T ss_dssp EEEESTS---HHHHHHHHHHHHTTCEEEEEESHH-HHHHHHHH
T ss_pred CEEECcC---HHHHHHHHHHHHCCCceEEEEccc-cHHhhhhe
Confidence 5788887 8999999999999999999 666 88888765
No 418
>PRK07578 short chain dehydrogenase; Provisional
Probab=72.77 E-value=4 Score=39.55 Aligned_cols=27 Identities=26% Similarity=0.389 Sum_probs=24.4
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
+|+++|++| -||+++|+.|+++ .+|.+
T Consensus 2 ~vlItGas~--giG~~la~~l~~~-~~vi~ 28 (199)
T PRK07578 2 KILVIGASG--TIGRAVVAELSKR-HEVIT 28 (199)
T ss_pred eEEEEcCCc--HHHHHHHHHHHhc-CcEEE
Confidence 589999998 9999999999987 77777
No 419
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=72.75 E-value=3.5 Score=45.47 Aligned_cols=121 Identities=9% Similarity=0.098 Sum_probs=66.7
Q ss_pred EEEEeccCCChhhHHHHHH-HHhccCce---EEe----cchhhhHHHHhh------Cc-hh--hcccceecc-c-hhhcc
Q 006894 465 HVLLRGTVTANKVANAVAS-SLCQMGIK---VAT----ICKDDYEKLKLR------IP-VE--AQHNLVLST-S-YAAHK 525 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~-~L~~~~~~---v~l----~~~~~~~~l~~~------~~-~~--~~~~lv~~~-~-~~~a~ 525 (627)
+|+++|||| -+|+.+.+ .|.++... +.+ ++.++...++.+ +. .+ .+.++|... . -..+.
T Consensus 3 ~VAIVGATG--~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~~~~f~g~~~~v~~~~~~~~~~~~Divf~a~~~~~s~~ 80 (369)
T PRK06598 3 KVGFVGWRG--MVGSVLMQRMVEENDFDLIEPVFFSTSQAGGAAPSFGGKEGTLQDAFDIDALKKLDIIITCQGGDYTNE 80 (369)
T ss_pred EEEEEeCCC--HHHHHHHHHHHhCCCCCcCcEEEecchhhCCcccccCCCcceEEecCChhHhcCCCEEEECCCHHHHHH
Confidence 689999999 99999998 77777776 444 222233222211 01 00 123343222 1 11122
Q ss_pred HHHhcCCCC--cEEeeCcCCCCc-CCCCCeeEeccCccccCCCccccccccccccch---hHHH-HHHhHHHhhhcCCCC
Q 006894 526 TEQARAPKG--TIFIPYTQIPPR-KLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRR---VMSA-WRIAGIIHALEGWDL 598 (627)
Q Consensus 526 ~e~~~a~~G--~~~~~~sq~P~~-~~R~dc~~~~~p~~~~P~~~~~~~~~e~~~pr~---~~~A-c~a~~~~~alEg~~~ 598 (627)
.+++-++.| +.++|-| .. .+++|+.|+--..+. +.++ ...+++ +... |.+-+|+++|-....
T Consensus 81 ~~~~~~~aG~~~~VID~S---s~fR~~~dvplvvPEvN~--e~i~------~~~~~g~~iIanPnC~tt~~~laL~PL~~ 149 (369)
T PRK06598 81 VYPKLRAAGWQGYWIDAA---STLRMKDDAIIILDPVNR--DVID------DALANGVKTFVGGNCTVSLMLMALGGLFK 149 (369)
T ss_pred HHHHHHhCCCCeEEEECC---hHHhCCCCCcEEcCCcCH--HHHH------hhhhcCCCEEEcCChHHHHHHHHHHHHHh
Confidence 334445678 6799888 55 667787775322221 1222 111222 3333 999999998877644
No 420
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=72.39 E-value=5.6 Score=44.27 Aligned_cols=41 Identities=20% Similarity=0.252 Sum_probs=33.2
Q ss_pred HHHHHHhcC---------CCCCcEEEEeccCCChhhHHH--HHHHHhccCceEEe
Q 006894 451 AAAVVVNSL---------PKTTAHVLLRGTVTANKVANA--VASSLCQMGIKVAT 494 (627)
Q Consensus 451 taavv~~~i---------p~~~~~V~l~Gatg~~kig~a--va~~L~~~~~~v~l 494 (627)
..+-|.||| .++.+.|+++|+++ .+|.| ||+.| +.|.++++
T Consensus 20 c~~~v~~qi~~~~~~~~~~~ggK~aLVTGaSs--GIGlA~~IA~al-~~GA~Vi~ 71 (398)
T PRK13656 20 CEANVKEQIEYVKAQGPIANGPKKVLVIGASS--GYGLASRIAAAF-GAGADTLG 71 (398)
T ss_pred HHHHHHHHHHHHHhcCCcCCCCCEEEEECCCc--hHhHHHHHHHHH-HcCCeEEE
Confidence 345666666 24678999999997 99999 99999 99998766
No 421
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=72.11 E-value=5.7 Score=41.21 Aligned_cols=39 Identities=15% Similarity=0.237 Sum_probs=34.0
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 506 (627)
+|.++|+ | .+|.++|..|++.|.+|++ |++++++.++++
T Consensus 2 ~I~IiG~-G--~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~ 42 (304)
T PRK06522 2 KIAILGA-G--AIGGLFGAALAQAGHDVTLVARRGAHLDALNEN 42 (304)
T ss_pred EEEEECC-C--HHHHHHHHHHHhCCCeEEEEECChHHHHHHHHc
Confidence 5899998 5 9999999999999999998 778888888764
No 422
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=72.01 E-value=3.6 Score=43.06 Aligned_cols=27 Identities=22% Similarity=0.434 Sum_probs=24.2
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
+|+|+|++| -||+.+++.|.++| +|..
T Consensus 2 ~iLVtG~~G--fiGs~l~~~L~~~g-~V~~ 28 (299)
T PRK09987 2 NILLFGKTG--QVGWELQRALAPLG-NLIA 28 (299)
T ss_pred eEEEECCCC--HHHHHHHHHhhccC-CEEE
Confidence 699999999 99999999999888 6654
No 423
>PRK07364 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=71.87 E-value=3 Score=45.26 Aligned_cols=30 Identities=27% Similarity=0.306 Sum_probs=27.6
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
.+.+|+++||- =.|.++|.+|+|.|.+|++
T Consensus 17 ~~~dV~IvGaG---~aGl~~A~~L~~~G~~v~v 46 (415)
T PRK07364 17 LTYDVAIVGGG---IVGLTLAAALKDSGLRIAL 46 (415)
T ss_pred cccCEEEECcC---HHHHHHHHHHhcCCCEEEE
Confidence 46689999997 8899999999999999999
No 424
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=71.79 E-value=6 Score=39.70 Aligned_cols=44 Identities=20% Similarity=0.279 Sum_probs=37.7
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV 509 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~ 509 (627)
..|.++||.- -||+++|+.|++.|.+|.- |+++.+++|-+|-+.
T Consensus 8 ~~vlvTgaga--GIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~ 53 (245)
T KOG1207|consen 8 VIVLVTGAGA--GIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPS 53 (245)
T ss_pred eEEEeecccc--cccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCc
Confidence 4678888664 8999999999999999998 999999999877544
No 425
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=71.71 E-value=4.5 Score=42.39 Aligned_cols=28 Identities=25% Similarity=0.409 Sum_probs=26.1
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
+|+++|++| -||+++++.|.++|.++..
T Consensus 2 riLI~GasG--~lG~~l~~~l~~~~~~v~~ 29 (286)
T PF04321_consen 2 RILITGASG--FLGSALARALKERGYEVIA 29 (286)
T ss_dssp EEEEETTTS--HHHHHHHHHHTTTSEEEEE
T ss_pred EEEEECCCC--HHHHHHHHHHhhCCCEEEE
Confidence 689999999 9999999999999988877
No 426
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=71.63 E-value=3.8 Score=42.30 Aligned_cols=27 Identities=15% Similarity=0.386 Sum_probs=24.1
Q ss_pred EEEeccCCChhhHHHHHHHHhccCc-eEEe
Q 006894 466 VLLRGTVTANKVANAVASSLCQMGI-KVAT 494 (627)
Q Consensus 466 V~l~Gatg~~kig~ava~~L~~~~~-~v~l 494 (627)
|+++|+|| -||+.+|+.|.++|. +|..
T Consensus 1 ilItGatG--~iG~~l~~~L~~~g~~~v~~ 28 (314)
T TIGR02197 1 IIVTGGAG--FIGSNLVKALNERGITDILV 28 (314)
T ss_pred CEEeCCcc--hhhHHHHHHHHHcCCceEEE
Confidence 68999999 999999999999997 5665
No 427
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=71.63 E-value=13 Score=38.67 Aligned_cols=54 Identities=13% Similarity=0.009 Sum_probs=39.2
Q ss_pred hHHHHHHhcCCC-CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHh
Q 006894 450 LAAAVVVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (627)
Q Consensus 450 ltaavv~~~ip~-~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 505 (627)
.||...++.+.. ....|++.|++| .+|.+.++.+.++|.+++. ++.++.+.+++
T Consensus 149 ~~a~~~~~~~~~~~~~~vlI~g~~g--~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~ 205 (334)
T PRK13771 149 GMVYRGLRRAGVKKGETVLVTGAGG--GVGIHAIQVAKALGAKVIAVTSSESKAKIVSK 205 (334)
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCc--cHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 344444445522 345899999998 9999999988889999876 77777776643
No 428
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=71.24 E-value=6.4 Score=36.25 Aligned_cols=28 Identities=18% Similarity=0.358 Sum_probs=25.3
Q ss_pred EEEEeccCCChhhHHHHHHHHhc-cCceEEe
Q 006894 465 HVLLRGTVTANKVANAVASSLCQ-MGIKVAT 494 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~-~~~~v~l 494 (627)
+|.++|++| |+|+++++.+.+ ++.++.-
T Consensus 2 rV~i~G~~G--rMG~~i~~~i~~~~~~~lv~ 30 (124)
T PF01113_consen 2 RVGIVGASG--RMGRAIAEAILESPGFELVG 30 (124)
T ss_dssp EEEEETTTS--HHHHHHHHHHHHSTTEEEEE
T ss_pred EEEEECCCC--HHHHHHHHHHHhcCCcEEEE
Confidence 589999999 999999999996 7888777
No 429
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=71.01 E-value=14 Score=37.91 Aligned_cols=42 Identities=17% Similarity=0.184 Sum_probs=34.8
Q ss_pred CCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHH
Q 006894 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (627)
Q Consensus 461 ~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~ 504 (627)
+....|++.|++| .||.++++.+..+|.++.. ++.++.+.++
T Consensus 137 ~~~~~vlI~g~~~--~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 180 (323)
T cd05282 137 PPGDWVIQNAANS--AVGRMLIQLAKLLGFKTINVVRRDEQVEELK 180 (323)
T ss_pred CCCCEEEEccccc--HHHHHHHHHHHHCCCeEEEEecChHHHHHHH
Confidence 3456899999998 9999998888889999877 7777777774
No 430
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=70.98 E-value=3.5 Score=43.85 Aligned_cols=32 Identities=19% Similarity=0.265 Sum_probs=28.6
Q ss_pred EEEeccCCChhhHHHHHHHHhccCceEEe--cchhh
Q 006894 466 VLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDD 499 (627)
Q Consensus 466 V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~ 499 (627)
|+++|+|| =||++++..|++.|-+|++ |+..+
T Consensus 1 IliTGgTG--lIG~~L~~~L~~~gh~v~iltR~~~~ 34 (297)
T COG1090 1 ILITGGTG--LIGRALTARLRKGGHQVTILTRRPPK 34 (297)
T ss_pred CeEecccc--chhHHHHHHHHhCCCeEEEEEcCCcc
Confidence 58999999 9999999999999999998 66554
No 431
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=70.68 E-value=13 Score=36.13 Aligned_cols=77 Identities=18% Similarity=0.147 Sum_probs=47.1
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh-C-----ch-hhcccceecc-chh---hcc---
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR-I-----PV-EAQHNLVLST-SYA---AHK--- 525 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~-~-----~~-~~~~~lv~~~-~~~---~a~--- 525 (627)
..++|.++|.. .||+++|+.|..-|.+|.. |+.+.-+..... . .+ -.+.++|.+. .+. ...
T Consensus 35 ~g~tvgIiG~G---~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~~~l~ell~~aDiv~~~~plt~~T~~li~~ 111 (178)
T PF02826_consen 35 RGKTVGIIGYG---RIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEYVSLDELLAQADIVSLHLPLTPETRGLINA 111 (178)
T ss_dssp TTSEEEEESTS---HHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEESSHHHHHHH-SEEEE-SSSSTTTTTSBSH
T ss_pred CCCEEEEEEEc---CCcCeEeeeeecCCceeEEecccCChhhhcccccceeeehhhhcchhhhhhhhhccccccceeeee
Confidence 46789999985 9999999999999999999 444432211111 1 11 0223333111 222 122
Q ss_pred HHHhcCCCCcEEeeCc
Q 006894 526 TEQARAPKGTIFIPYT 541 (627)
Q Consensus 526 ~e~~~a~~G~~~~~~s 541 (627)
.+=+.+|+|+.|+.++
T Consensus 112 ~~l~~mk~ga~lvN~a 127 (178)
T PF02826_consen 112 EFLAKMKPGAVLVNVA 127 (178)
T ss_dssp HHHHTSTTTEEEEESS
T ss_pred eeeeccccceEEEecc
Confidence 4468999999999988
No 432
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=70.50 E-value=16 Score=36.81 Aligned_cols=40 Identities=15% Similarity=0.132 Sum_probs=33.2
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHH
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~ 504 (627)
...|++.|++| -+|.+.++.+...|.+|.. ++.++.+.++
T Consensus 137 g~~vlI~g~~g--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 178 (320)
T cd05286 137 GDTVLVHAAAG--GVGLLLTQWAKALGATVIGTVSSEEKAELAR 178 (320)
T ss_pred CCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH
Confidence 46899999998 9999999887788999887 6777777663
No 433
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=70.08 E-value=11 Score=39.15 Aligned_cols=43 Identities=21% Similarity=0.298 Sum_probs=33.3
Q ss_pred CCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHH
Q 006894 460 PKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (627)
Q Consensus 460 p~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~ 504 (627)
.++...|++.|++| .+|.++++.+..+|.++.. +++++.+.++
T Consensus 143 ~~~~~~vlI~g~~g--~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~ 187 (323)
T TIGR02823 143 TPEDGPVLVTGATG--GVGSLAVAILSKLGYEVVASTGKAEEEDYLK 187 (323)
T ss_pred CCCCceEEEEcCCc--HHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH
Confidence 33434899999998 9999999988889999876 5666656553
No 434
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=69.99 E-value=8.5 Score=41.84 Aligned_cols=27 Identities=11% Similarity=0.186 Sum_probs=24.2
Q ss_pred EEEEeccCCChhhHHHHHHHHhcc-CceEE
Q 006894 465 HVLLRGTVTANKVANAVASSLCQM-GIKVA 493 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~-~~~v~ 493 (627)
+|+++|||| -+|..+++.|.+. +.++.
T Consensus 2 kVaIiGATG--~vG~ellr~L~~hP~~el~ 29 (346)
T TIGR01850 2 KVAIVGASG--YTGGELLRLLLNHPEVEIT 29 (346)
T ss_pred EEEEECCCC--HHHHHHHHHHHcCCCceEE
Confidence 689999999 9999999999964 77777
No 435
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form. This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.
Probab=69.94 E-value=6.7 Score=42.31 Aligned_cols=118 Identities=11% Similarity=0.096 Sum_probs=66.2
Q ss_pred cEEEEeccCCChhhHHHHHHHHhc-cCceEEe-cchhhhHHHHh-hCchhhcccceec-cc-hhhccHHHhcCCCCcEEe
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQ-MGIKVAT-ICKDDYEKLKL-RIPVEAQHNLVLS-TS-YAAHKTEQARAPKGTIFI 538 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~-~~~~v~l-~~~~~~~~l~~-~~~~~~~~~lv~~-~~-~~~a~~e~~~a~~G~~~~ 538 (627)
-+|+++||+| =.|.-+.|.|.+ ..+++.- .++++++.... ++. .+.++|+. +. -..+...++-..+|+.+|
T Consensus 2 ~~v~IvGasG--y~G~el~rlL~~HP~~el~~l~s~~~~~~~~~~~~~--~~~D~vFlalp~~~s~~~~~~~~~~g~~VI 77 (310)
T TIGR01851 2 PKVFIDGEAG--TTGLQIRERLSGRDDIELLSIAPDRRKDAAERAKLL--NAADVAILCLPDDAAREAVSLVDNPNTCII 77 (310)
T ss_pred CeEEEECCCC--hhHHHHHHHHhCCCCeEEEEEecccccCcCCHhHhh--cCCCEEEECCCHHHHHHHHHHHHhCCCEEE
Confidence 4799999999 999999999996 5777766 33333332111 111 13455533 32 222222233346799999
Q ss_pred eCcCCCCc-CCCCCeeEeccCccccCCCccccccccccccchhHHH-HHHhHHHhhhcC
Q 006894 539 PYTQIPPR-KLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRRVMSA-WRIAGIIHALEG 595 (627)
Q Consensus 539 ~~sq~P~~-~~R~dc~~~~~p~~~~P~~~~~~~~~e~~~pr~~~~A-c~a~~~~~alEg 595 (627)
|.| .. .+++|..|+---.+. +..+. ..-.+.+.-+ |.+-+++++|--
T Consensus 78 DlS---adfRl~~~~~yglPEln~--~~~~~-----i~~a~lIAnPgC~aTa~~LaL~P 126 (310)
T TIGR01851 78 DAS---TAYRTADDWAYGFPELAP--GQREK-----IRNSKRIANPGCYPTGFIALMRP 126 (310)
T ss_pred ECC---hHHhCCCCCeEEccccCH--HHHHh-----hccCCEEECCCCHHHHHHHHHHH
Confidence 998 66 666777775211110 00000 1112334444 999999887644
No 436
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=69.84 E-value=7.9 Score=36.56 Aligned_cols=41 Identities=24% Similarity=0.276 Sum_probs=30.3
Q ss_pred EEEEeccCCChhhHHHHHHHHhcc--CceEEe--cchhhhHHHHhhC
Q 006894 465 HVLLRGTVTANKVANAVASSLCQM--GIKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~--~~~v~l--~~~~~~~~l~~~~ 507 (627)
+|.++||+| .||+++|..|+.+ +-++.| +++++.+....++
T Consensus 2 KV~IiGa~G--~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl 46 (141)
T PF00056_consen 2 KVAIIGAAG--NVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDL 46 (141)
T ss_dssp EEEEESTTS--HHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHH
T ss_pred EEEEECCCC--hHHHHHHHHHHhCCCCCceEEeccCcccceeeehhh
Confidence 789999998 9999999999965 345665 6656555544443
No 437
>TIGR02130 dapB_plant dihydrodipicolinate reductase. This narrow family includes genes from Arabidopsis and Fibrobacter succinogenes (which probably recieved the gene from a plant via lateral gene transfer). The sequences are distantly related to the dihydrodipicolinate reductases from archaea. In Fibrobacter this gene is the only candidate DHPR in the genome.
Probab=69.13 E-value=9.1 Score=40.63 Aligned_cols=28 Identities=21% Similarity=0.437 Sum_probs=24.3
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
+|.|.|++| |+|++++++..+++.++.=
T Consensus 2 ~V~V~Ga~G--kMG~~v~~av~~~~~~Lv~ 29 (275)
T TIGR02130 2 QIMVNGCPG--KMGKAVAEAADAAGLEIVP 29 (275)
T ss_pred eEEEeCCCC--hHHHHHHHHHhcCCCEEEe
Confidence 589999999 9999999998887766654
No 438
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=68.50 E-value=17 Score=38.47 Aligned_cols=42 Identities=21% Similarity=0.263 Sum_probs=33.4
Q ss_pred CCCcEEEEeccCCChhhHHHHHHHHhccCceEEe-cchhhhHHHH
Q 006894 461 KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLK 504 (627)
Q Consensus 461 ~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~ 504 (627)
+..++|++.|++| .+|.++++.+..+|.++.. .+.++.+.++
T Consensus 153 ~~~~~vlI~ga~g--~vg~~~~~~a~~~G~~v~~~~~~~~~~~~~ 195 (339)
T cd08249 153 SKGKPVLIWGGSS--SVGTLAIQLAKLAGYKVITTASPKNFDLVK 195 (339)
T ss_pred CCCCEEEEEcChh--HHHHHHHHHHHHcCCeEEEEECcccHHHHH
Confidence 3467999999998 9999998888889999877 4456666663
No 439
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=68.28 E-value=12 Score=38.87 Aligned_cols=40 Identities=18% Similarity=0.193 Sum_probs=32.7
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhcc-CceEEe--cchhhhHHHH
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQM-GIKVAT--ICKDDYEKLK 504 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~-~~~v~l--~~~~~~~~l~ 504 (627)
...|++.|+.| .+|.++++.+... |++|.. +++++.+.++
T Consensus 149 g~~vlV~ga~g--~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~ 191 (336)
T TIGR02817 149 KRALLIIGGAG--GVGSILIQLARQLTGLTVIATASRPESQEWVL 191 (336)
T ss_pred CCEEEEEcCCc--HHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHH
Confidence 56899999998 9999998877766 999877 6677777764
No 440
>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]
Probab=68.17 E-value=22 Score=39.26 Aligned_cols=162 Identities=16% Similarity=0.126 Sum_probs=98.5
Q ss_pred eeecCChhHHHHHHhcCC--CCCcEEEEeccCCChhhHHHHHHHHhccCceEEecchhhhHHHHhhCch---------hh
Q 006894 443 KVVDGSSLAAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDDYEKLKLRIPV---------EA 511 (627)
Q Consensus 443 rvv~Gnsltaavv~~~ip--~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l~~~~~~~~l~~~~~~---------~~ 511 (627)
|-=||.|+.-++ .+..- -.-+.|+|+|=- .+|+-||+.|...|.+|.+..-|.-..|+..... -.
T Consensus 188 rYGtgqS~~DgI-~RaTn~liaGK~vVV~GYG---~vGrG~A~~~rg~GA~ViVtEvDPI~AleA~MdGf~V~~m~~Aa~ 263 (420)
T COG0499 188 RYGTGQSLLDGI-LRATNVLLAGKNVVVAGYG---WVGRGIAMRLRGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAAK 263 (420)
T ss_pred ccccchhHHHHH-HhhhceeecCceEEEeccc---ccchHHHHHhhcCCCeEEEEecCchHHHHHhhcCcEEEEhHHhhh
Confidence 445555554332 22221 134566777765 9999999999999999999444554455432211 01
Q ss_pred cccceeccc--hhhcc--HHHhcCCCCcEEeeCcCCC--------------CcCCCCCeeEeccCc-ccc----CCCccc
Q 006894 512 QHNLVLSTS--YAAHK--TEQARAPKGTIFIPYTQIP--------------PRKLRKDCFYHSTPA-MII----PPSLSN 568 (627)
Q Consensus 512 ~~~lv~~~~--~~~a~--~e~~~a~~G~~~~~~sq~P--------------~~~~R~dc~~~~~p~-~~~----P~~~~~ 568 (627)
..++ .+|. -.... ++-+.+|.|++++..-+|- .++.|+.+.-.+.|- -++ -|.+-|
T Consensus 264 ~gDi-fiT~TGnkdVi~~eh~~~MkDgaIl~N~GHFd~EI~~~~L~~~~~~~~~vr~~V~ey~l~~Gkri~llaeGRLvN 342 (420)
T COG0499 264 TGDI-FVTATGNKDVIRKEHFEKMKDGAILANAGHFDVEIDVAGLEELAVEKREVRPQVDEYELPDGKRIILLAEGRLVN 342 (420)
T ss_pred cCCE-EEEccCCcCccCHHHHHhccCCeEEecccccceeccHHHHHHhhhhHhccccCceEEEcCCCCEEEEEecceeee
Confidence 1121 2221 11111 5568999999998665533 115565555555442 211 566788
Q ss_pred cccccccccchhHHHHHHhHHHhhhcCCCCC---ccch--hhhhHHH
Q 006894 569 MHSCENWLGRRVMSAWRIAGIIHALEGWDLN---ECGQ--TMCDIHQ 610 (627)
Q Consensus 569 ~~~~e~~~pr~~~~Ac~a~~~~~alEg~~~~---e~G~--iv~~i~~ 610 (627)
+. |--|.|..+|+..+|--.+-+.|=|..| |-|- +...+|+
T Consensus 343 La-~a~GHPs~VMd~SFanQaLa~~~L~~n~~~~~~~Vy~lP~~lD~ 388 (420)
T COG0499 343 LA-AATGHPSEVMDMSFANQALAQIYLVKNHGKLEPGVYRLPKELDE 388 (420)
T ss_pred ec-cCCCCcHHHhhhhHHHHHHHHHHHHhcccccCCceeeCcHHHHH
Confidence 88 8899999999999999998888877766 4554 2355554
No 441
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=68.14 E-value=15 Score=37.99 Aligned_cols=42 Identities=17% Similarity=0.134 Sum_probs=34.3
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHh
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 505 (627)
....|++.|++| .||.++++.+...|.++.. ++.++.+.+++
T Consensus 139 ~g~~vlI~g~~g--~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~ 182 (324)
T cd08292 139 PGQWLIQNAAGG--AVGKLVAMLAAARGINVINLVRRDAGVAELRA 182 (324)
T ss_pred CCCEEEEccccc--HHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh
Confidence 356899999998 9999999988889999877 66777776654
No 442
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=67.99 E-value=6.6 Score=46.05 Aligned_cols=45 Identities=20% Similarity=0.286 Sum_probs=38.6
Q ss_pred CCCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh
Q 006894 459 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (627)
Q Consensus 459 ip~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 506 (627)
+++.+++|.++|.. .+|+.+|+.|.++|+++++ .|+++-++++++
T Consensus 396 ~~~~~~~vII~G~G---r~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~ 442 (621)
T PRK03562 396 IDEQQPRVIIAGFG---RFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKF 442 (621)
T ss_pred cccccCcEEEEecC---hHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhc
Confidence 44456799999998 9999999999999999988 888888888754
No 443
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=67.93 E-value=8.1 Score=40.71 Aligned_cols=40 Identities=13% Similarity=0.287 Sum_probs=34.5
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 506 (627)
++|.++|+. .+|+++|..|++.|.+|++ +++++.++++++
T Consensus 5 ~~I~vIGaG---~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~ 46 (311)
T PRK06130 5 QNLAIIGAG---TMGSGIAALFARKGLQVVLIDVMEGALERARGV 46 (311)
T ss_pred cEEEEECCC---HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH
Confidence 579999996 9999999999999999998 778887777653
No 444
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=67.93 E-value=7.3 Score=40.84 Aligned_cols=36 Identities=14% Similarity=0.138 Sum_probs=31.4
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHH
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 502 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~ 502 (627)
++|.++|+- .+|+++|+.|++.|.+|.+ ++.++.++
T Consensus 5 ~~V~vIG~G---~mG~~iA~~l~~~G~~V~~~d~~~~~~~~ 42 (295)
T PLN02545 5 KKVGVVGAG---QMGSGIAQLAAAAGMDVWLLDSDPAALSR 42 (295)
T ss_pred CEEEEECCC---HHHHHHHHHHHhcCCeEEEEeCCHHHHHH
Confidence 569999986 9999999999999999999 77777664
No 445
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=67.92 E-value=12 Score=40.79 Aligned_cols=41 Identities=12% Similarity=0.056 Sum_probs=33.5
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHh
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 505 (627)
...|+|.|++| .||.++++++...|.++.. ++.++.+.+++
T Consensus 190 g~~vlV~Ga~g--~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~ 232 (398)
T TIGR01751 190 GDNVLIWGAAG--GLGSYATQLARAGGGNPVAVVSSPEKAEYCRE 232 (398)
T ss_pred CCEEEEEcCCc--HHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH
Confidence 46999999998 9999999888788998765 77777777654
No 446
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=67.86 E-value=7.6 Score=39.60 Aligned_cols=36 Identities=22% Similarity=0.342 Sum_probs=32.0
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHH
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEK 502 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~ 502 (627)
.++.++|+. .+|+.+|+-|.++|..|++ +++++.++
T Consensus 1 m~iiIiG~G---~vG~~va~~L~~~g~~Vv~Id~d~~~~~~ 38 (225)
T COG0569 1 MKIIIIGAG---RVGRSVARELSEEGHNVVLIDRDEERVEE 38 (225)
T ss_pred CEEEEECCc---HHHHHHHHHHHhCCCceEEEEcCHHHHHH
Confidence 368899998 9999999999999999999 88888777
No 447
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=67.77 E-value=5.5 Score=44.28 Aligned_cols=96 Identities=24% Similarity=0.339 Sum_probs=58.0
Q ss_pred eeeEEEEeccCcc-cccchhhHHHHHHHHHHHHHHHHcCCcEEEe--cccccccccccCCceeEecCCCcccceeecCCh
Q 006894 373 KLQTWVVPRYIVQ-YNLPWRREAINSLIEEAILEADAKGVKVISL--GLLNQGEELNRNGEIYLERQPNKLKIKVVDGSS 449 (627)
Q Consensus 373 ~~~~w~~pr~~~~-y~~~~~~~~in~~Ie~Ai~~A~~~G~kv~~L--G~ln~~e~ln~~g~~~~~r~p~~L~irvv~Gns 449 (627)
....-++|.-+-. |..|-- .+-+..-.+.|+.|+.= |-|-.+| .|.| |-|+ .+
T Consensus 116 ~~pvvi~Pamn~~m~~~p~~--------~~Nl~~L~~~G~~ii~P~~g~la~~~--~g~g-----r~~~-~~-------- 171 (399)
T PRK05579 116 TAPVLVAPAMNTQMWENPAT--------QRNLATLRSRGVEIIGPASGRLACGD--VGPG-----RMAE-PE-------- 171 (399)
T ss_pred CCCEEEEeCCChhHcCCHHH--------HHHHHHHHHCCCEEECCCCccccCCC--cCCC-----CCCC-HH--------
Confidence 3467778876663 333333 23344445579999853 3343333 2333 3444 21
Q ss_pred hHHHHHHhcC-CC--CCcEEEEecc----------------CCChhhHHHHHHHHhccCceEEe
Q 006894 450 LAAAVVVNSL-PK--TTAHVLLRGT----------------VTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 450 ltaavv~~~i-p~--~~~~V~l~Ga----------------tg~~kig~ava~~L~~~~~~v~l 494 (627)
-.+..+.+.+ ++ ..+.|+++|+ +| ++|+++|+.|+++|.+|++
T Consensus 172 ~I~~~~~~~~~~~~l~gk~vlITgG~T~E~ID~VR~isN~SSG--~~G~aiA~~l~~~Ga~V~~ 233 (399)
T PRK05579 172 EIVAAAERALSPKDLAGKRVLITAGPTREPIDPVRYITNRSSG--KMGYALARAAARRGADVTL 233 (399)
T ss_pred HHHHHHHHHhhhcccCCCEEEEeCCCccccccceeeeccCCcc--hHHHHHHHHHHHCCCEEEE
Confidence 1122333333 22 4568999998 77 9999999999999999998
No 448
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=67.56 E-value=7.2 Score=41.42 Aligned_cols=41 Identities=27% Similarity=0.386 Sum_probs=33.0
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCc--eEEe--cchhhhHHHHhhC
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGI--KVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~--~v~l--~~~~~~~~l~~~~ 507 (627)
++|.++|+ | .||+++|..|+++|. ++.+ +++++.+.+..++
T Consensus 1 ~kI~IIGa-G--~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL 45 (306)
T cd05291 1 RKVVIIGA-G--HVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDL 45 (306)
T ss_pred CEEEEECC-C--HHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhH
Confidence 36899997 6 899999999998884 6777 7778777666655
No 449
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=67.13 E-value=15 Score=35.79 Aligned_cols=39 Identities=21% Similarity=0.266 Sum_probs=29.3
Q ss_pred HHHhcC--CCCCcEEEEec--cCCChhhHHHHHHHHhccCceEEe
Q 006894 454 VVVNSL--PKTTAHVLLRG--TVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 454 vv~~~i--p~~~~~V~l~G--atg~~kig~ava~~L~~~~~~v~l 494 (627)
.+.+.+ ++..+-++||| ++| --|.++||.|+++|++|.+
T Consensus 15 ~i~~~~~~~~~~~v~il~G~GnNG--gDgl~~AR~L~~~G~~V~v 57 (169)
T PF03853_consen 15 LIRKLFGSPKGPRVLILCGPGNNG--GDGLVAARHLANRGYNVTV 57 (169)
T ss_dssp HHHHHSTCCTT-EEEEEE-SSHHH--HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHhcccCCCeEEEEECCCCCh--HHHHHHHHHHHHCCCeEEE
Confidence 455566 56677777885 455 7899999999999999988
No 450
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=67.03 E-value=8.3 Score=44.17 Aligned_cols=39 Identities=18% Similarity=0.144 Sum_probs=34.2
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHH
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL 503 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l 503 (627)
.-++|.++|+ | ..|+.||..|++.|.+|++ ++++.+++.
T Consensus 6 ~i~~V~VIGa-G--~MG~gIA~~la~aG~~V~l~D~~~e~l~~~ 46 (507)
T PRK08268 6 SIATVAVIGA-G--AMGAGIAQVAAQAGHTVLLYDARAGAAAAA 46 (507)
T ss_pred CCCEEEEECC-C--HHHHHHHHHHHhCCCeEEEEeCCHHHHHHH
Confidence 4578999999 5 9999999999999999999 888877764
No 451
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=66.79 E-value=6.1 Score=36.50 Aligned_cols=35 Identities=26% Similarity=0.370 Sum_probs=27.8
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCce-EEecchhhh
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIK-VATICKDDY 500 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~-v~l~~~~~~ 500 (627)
.++|+++|+. .+|+.+|..|++-|++ +++-+.+..
T Consensus 2 ~~~v~iiG~G---~vGs~va~~L~~~Gv~~i~lvD~d~v 37 (135)
T PF00899_consen 2 NKRVLIIGAG---GVGSEVAKNLARSGVGKITLVDDDIV 37 (135)
T ss_dssp T-EEEEESTS---HHHHHHHHHHHHHTTSEEEEEESSBB
T ss_pred CCEEEEECcC---HHHHHHHHHHHHhCCCceeecCCcce
Confidence 4689999998 7999999999999995 555555543
No 452
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=66.65 E-value=14 Score=38.36 Aligned_cols=41 Identities=17% Similarity=0.115 Sum_probs=33.4
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHH
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~ 504 (627)
....|++.|++| .+|.++++.+.+.|.+|.. +++++.+.++
T Consensus 139 ~~~~vlI~ga~g--~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 181 (329)
T cd08250 139 SGETVLVTAAAG--GTGQFAVQLAKLAGCHVIGTCSSDEKAEFLK 181 (329)
T ss_pred CCCEEEEEeCcc--HHHHHHHHHHHHcCCeEEEEeCcHHHHHHHH
Confidence 356899999998 9999988877788999877 7777777664
No 453
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=66.39 E-value=7.1 Score=42.39 Aligned_cols=42 Identities=26% Similarity=0.361 Sum_probs=31.1
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCc-eEEe--cchhhhHHHHhh
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT--ICKDDYEKLKLR 506 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~-~v~l--~~~~~~~~l~~~ 506 (627)
..++|+++|+. .+|+.+|..|++.|+ ++++ ++.-+..+|+++
T Consensus 23 ~~~~VlIiG~G---glGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ 67 (338)
T PRK12475 23 REKHVLIVGAG---ALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQ 67 (338)
T ss_pred cCCcEEEECCC---HHHHHHHHHHHHcCCCEEEEEcCCcccccccCcc
Confidence 46789999986 799999999999998 6666 333234444433
No 454
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=66.29 E-value=16 Score=37.75 Aligned_cols=41 Identities=20% Similarity=0.324 Sum_probs=34.0
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHH
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~ 504 (627)
+...|++.|++| .+|.++++.....|.++.. .++++.+.++
T Consensus 146 ~~~~vlI~ga~g--~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~ 188 (324)
T cd08288 146 GDGPVLVTGAAG--GVGSVAVALLARLGYEVVASTGRPEEADYLR 188 (324)
T ss_pred CCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence 446899999998 9999999987789999877 6777777773
No 455
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=66.26 E-value=11 Score=36.69 Aligned_cols=30 Identities=17% Similarity=0.267 Sum_probs=25.3
Q ss_pred EEEEeccCCChhhHHHHHHHHhccC-ceEEe--cc
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMG-IKVAT--IC 496 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~-~~v~l--~~ 496 (627)
.++++|.+| .||..+|++|++++ .++.+ |+
T Consensus 2 tylitGG~g--glg~~la~~La~~~~~~~il~~r~ 34 (181)
T PF08659_consen 2 TYLITGGLG--GLGQSLARWLAERGARRLILLGRS 34 (181)
T ss_dssp EEEEETTTS--HHHHHHHHHHHHTT-SEEEEEESS
T ss_pred EEEEECCcc--HHHHHHHHHHHHcCCCEEEEeccC
Confidence 578999999 99999999999874 46666 66
No 456
>PRK01713 ornithine carbamoyltransferase; Provisional
Probab=65.48 E-value=37 Score=36.97 Aligned_cols=107 Identities=16% Similarity=0.172 Sum_probs=72.1
Q ss_pred cccchhhHHHHHHHHHHHHHHHHcCCcEEEeccc----ccccc-------cccCCceeEecCCC---------cccceee
Q 006894 386 YNLPWRREAINSLIEEAILEADAKGVKVISLGLL----NQGEE-------LNRNGEIYLERQPN---------KLKIKVV 445 (627)
Q Consensus 386 y~~~~~~~~in~~Ie~Ai~~A~~~G~kv~~LG~l----n~~e~-------ln~~g~~~~~r~p~---------~L~irvv 445 (627)
|+-|+-+- =.. -|.|+ .++|.+++.|+.= +++|. |.+..-+.+.|+|. ...|.|+
T Consensus 53 F~epSTRT-R~S-Fe~A~---~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~y~D~iv~R~~~~~~~~~~a~~~~vPVI 127 (334)
T PRK01713 53 FEKTSTRT-RCA-FEVAA---YDQGAQVTYIDPNSSQIGHKESMKDTARVLGRMYDAIEYRGFKQSIVNELAEYAGVPVF 127 (334)
T ss_pred eCCCCchH-HHH-HHHHH---HHcCCeEEEcCCccccCCCCcCHHHHHHHHHHhCCEEEEEcCchHHHHHHHHhCCCCEE
Confidence 44455443 222 45554 6899999999743 44454 34556677888886 3679999
Q ss_pred cCCh--------h-HHHHHHhcCC--CCCcEEEEeccCCChhhHHHHHHHHhccCceEEecchh
Q 006894 446 DGSS--------L-AAAVVVNSLP--KTTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKD 498 (627)
Q Consensus 446 ~Gns--------l-taavv~~~ip--~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l~~~~ 498 (627)
+|.+ | =..++.+... -+..+|+++|... +.+++..+.++++-|.++.+-.++
T Consensus 128 Na~~~~~HPtQaL~Dl~Ti~e~~g~~l~gl~ia~vGD~~-~~v~~Sl~~~~~~~g~~v~~~~P~ 190 (334)
T PRK01713 128 NGLTDEFHPTQMLADVLTMIENCDKPLSEISYVYIGDAR-NNMGNSLLLIGAKLGMDVRICAPK 190 (334)
T ss_pred ECCCCCCChHHHHHHHHHHHHHcCCCcCCcEEEEECCCc-cCHHHHHHHHHHHcCCEEEEECCc
Confidence 9866 1 2356666543 2456999999973 369999999998999999993333
No 457
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=65.44 E-value=8.9 Score=39.20 Aligned_cols=32 Identities=19% Similarity=0.258 Sum_probs=26.8
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCce---EEe--cc
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIK---VAT--IC 496 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~---v~l--~~ 496 (627)
...+|++.||- ..|++||..|++.|++ +.+ |+
T Consensus 24 ~~~rvlvlGAG---gAg~aiA~~L~~~G~~~~~i~ivdr~ 60 (226)
T cd05311 24 EEVKIVINGAG---AAGIAIARLLLAAGAKPENIVVVDSK 60 (226)
T ss_pred cCCEEEEECch---HHHHHHHHHHHHcCcCcceEEEEeCC
Confidence 45689999995 7899999999998875 777 55
No 458
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=65.35 E-value=6.9 Score=40.72 Aligned_cols=30 Identities=27% Similarity=0.367 Sum_probs=27.2
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
-+.|+++|+.| -||++.+..|.++|++++.
T Consensus 5 GKna~vtggag--GIGl~~sk~Ll~kgik~~~ 34 (261)
T KOG4169|consen 5 GKNALVTGGAG--GIGLATSKALLEKGIKVLV 34 (261)
T ss_pred CceEEEecCCc--hhhHHHHHHHHHcCchhee
Confidence 35788999887 9999999999999999998
No 459
>PLN03139 formate dehydrogenase; Provisional
Probab=65.22 E-value=6.1 Score=43.83 Aligned_cols=86 Identities=17% Similarity=0.056 Sum_probs=48.8
Q ss_pred HHHcCCcEEEecccccc--cccccCCceeEecCCCcccceeecCChhHHHHHHhcCCCCCcEEEEeccCCChhhHHHHHH
Q 006894 406 ADAKGVKVISLGLLNQG--EELNRNGEIYLERQPNKLKIKVVDGSSLAAAVVVNSLPKTTAHVLLRGTVTANKVANAVAS 483 (627)
Q Consensus 406 A~~~G~kv~~LG~ln~~--e~ln~~g~~~~~r~p~~L~irvv~Gnsltaavv~~~ip~~~~~V~l~Gatg~~kig~ava~ 483 (627)
|.++|+.|..-..-|.. -|..-.-.|...|+-....-.+.+|.=-.+.....+..-..++|.++|. | .||+++|+
T Consensus 140 a~~~gI~V~n~~g~na~sVAE~al~liL~l~R~~~~~~~~~~~g~W~~~~~~~~~~~L~gktVGIVG~-G--~IG~~vA~ 216 (386)
T PLN03139 140 AAAAGLTVAEVTGSNVVSVAEDELMRILILLRNFLPGYHQVVSGEWNVAGIAYRAYDLEGKTVGTVGA-G--RIGRLLLQ 216 (386)
T ss_pred HHHCCeEEEECCCcCcHHHHHHHHHHHHHHHcCcHHHHHHHHhCCCccccccCCCcCCCCCEEEEEee-c--HHHHHHHH
Confidence 56688888887666654 2233333333334411011222233211100011122335678999994 6 99999999
Q ss_pred HHhccCceEEe
Q 006894 484 SLCQMGIKVAT 494 (627)
Q Consensus 484 ~L~~~~~~v~l 494 (627)
.|..-|.+|..
T Consensus 217 ~L~afG~~V~~ 227 (386)
T PLN03139 217 RLKPFNCNLLY 227 (386)
T ss_pred HHHHCCCEEEE
Confidence 99999999987
No 460
>KOG1298 consensus Squalene monooxygenase [Lipid transport and metabolism]
Probab=65.01 E-value=8.6 Score=42.85 Aligned_cols=45 Identities=18% Similarity=0.177 Sum_probs=34.7
Q ss_pred CCCCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh
Q 006894 459 LPKTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (627)
Q Consensus 459 ip~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 506 (627)
-..+++.|.++||. -.|+|+|-.|+|+|.||.+ |+-.+=+++-.|
T Consensus 41 ~~~~~~DvIIVGAG---V~GsaLa~~L~kdGRrVhVIERDl~EPdRivGE 87 (509)
T KOG1298|consen 41 RNDGAADVIIVGAG---VAGSALAYALAKDGRRVHVIERDLSEPDRIVGE 87 (509)
T ss_pred ccCCcccEEEECCc---chHHHHHHHHhhCCcEEEEEecccccchHHHHH
Confidence 34456789999998 8899999999999999999 555444444444
No 461
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=64.89 E-value=18 Score=37.83 Aligned_cols=52 Identities=15% Similarity=0.155 Sum_probs=36.7
Q ss_pred hHHHHHHhcC---CCCCcEEEEeccCCChhhHHHHHHHHhccC-ceEEe--cchhhhHHHH
Q 006894 450 LAAAVVVNSL---PKTTAHVLLRGTVTANKVANAVASSLCQMG-IKVAT--ICKDDYEKLK 504 (627)
Q Consensus 450 ltaavv~~~i---p~~~~~V~l~Gatg~~kig~ava~~L~~~~-~~v~l--~~~~~~~~l~ 504 (627)
.||...+..+ .+....|++.| .| .+|.++++.+.+.| .+|.. +++++.+.++
T Consensus 152 ~ta~~~l~~~~~~~~~~~~vlI~g-~~--~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~ 209 (340)
T cd05284 152 LTAYHAVKKALPYLDPGSTVVVIG-VG--GLGHIAVQILRALTPATVIAVDRSEEALKLAE 209 (340)
T ss_pred HHHHHHHHHhcccCCCCCEEEEEc-Cc--HHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHH
Confidence 3444444443 23456899999 55 59999999888888 88876 7788877764
No 462
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=64.83 E-value=18 Score=35.79 Aligned_cols=40 Identities=18% Similarity=0.206 Sum_probs=33.3
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHH
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~ 504 (627)
...|++.|++| .+|.++++.+...|++|.. +++++.+.++
T Consensus 105 g~~vlv~g~~~--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 146 (288)
T smart00829 105 GESVLIHAAAG--GVGQAAIQLAQHLGAEVFATAGSPEKRDFLR 146 (288)
T ss_pred CCEEEEecCCc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 45899999998 9999999888788999877 6778877664
No 463
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=64.76 E-value=8.2 Score=45.20 Aligned_cols=30 Identities=13% Similarity=0.159 Sum_probs=26.9
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
..+|+|+|++| -||+++++.|+++|.+|..
T Consensus 380 ~mkiLVtGa~G--~iG~~l~~~L~~~g~~v~~ 409 (668)
T PLN02260 380 SLKFLIYGRTG--WIGGLLGKLCEKQGIAYEY 409 (668)
T ss_pred CceEEEECCCc--hHHHHHHHHHHhCCCeEEe
Confidence 45899999999 9999999999999988843
No 464
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=64.19 E-value=18 Score=36.74 Aligned_cols=40 Identities=15% Similarity=0.206 Sum_probs=32.6
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHH
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKL 503 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l 503 (627)
....|++.|++| -+|.++.+.+..+|.++.. +++++.+.+
T Consensus 139 ~~~~vlv~g~~~--~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~ 180 (325)
T TIGR02824 139 AGETVLIHGGAS--GIGTTAIQLAKAFGARVFTTAGSDEKCAAC 180 (325)
T ss_pred CCCEEEEEcCcc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 346899999998 9999998888889999877 677666655
No 465
>cd03510 Rhizobitoxine-FADS-like This CD includes the dihydrorhizobitoxine fatty acid desaturase (RtxC) characterized in Bradyrhizobium japonicum USDA110, and other related proteins. Dihydrorhizobitoxine desaturase is reported to be involved in the final step of rhizobitoxine biosynthesis. This domain family appears to be structurally related to the membrane fatty acid desaturases and the alkane hydroxylases. They all share in common extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of sequences also reveals the existence of three regions of conserved histidine cluster motifs that contain eight histidine residues: HXXXH, HXX(X)HH, and HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within homologs, stearoyl CoA desaturase and alkane hydroxylase.
Probab=64.19 E-value=25 Score=34.55 Aligned_cols=16 Identities=38% Similarity=0.503 Sum_probs=12.2
Q ss_pred hhhhhcccCCCcCcCC
Q 006894 154 YLYSRYHSHHHSSVVT 169 (627)
Q Consensus 154 ~ly~r~H~~HH~s~~p 169 (627)
..|+..|..||...+.
T Consensus 71 ~~~r~~H~~HH~~~~~ 86 (175)
T cd03510 71 AAYRRSHLKHHRHLGT 86 (175)
T ss_pred HHHHHHHHHHhCccCC
Confidence 3677889999997653
No 466
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=64.16 E-value=20 Score=37.42 Aligned_cols=54 Identities=22% Similarity=0.302 Sum_probs=39.7
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe-cchhhhHHHHhhCchhhcccce
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT-ICKDDYEKLKLRIPVEAQHNLV 516 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l-~~~~~~~~l~~~~~~~~~~~lv 516 (627)
-++.+++|-.+..+|+..||+.|.+.|.++.. ...||+++=-+++.++.+..+|
T Consensus 6 GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v 60 (259)
T COG0623 6 GKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLV 60 (259)
T ss_pred CceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeE
Confidence 35677888666579999999999999999998 5555666555555555555555
No 467
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=64.01 E-value=15 Score=39.58 Aligned_cols=98 Identities=21% Similarity=0.274 Sum_probs=58.5
Q ss_pred HcCCcEEEeccc-ccc---cccccCCceeEecCCCcccceeecCChh-----HHHHHHhcCC--CCCcEEEEeccCCChh
Q 006894 408 AKGVKVISLGLL-NQG---EELNRNGEIYLERQPNKLKIKVVDGSSL-----AAAVVVNSLP--KTTAHVLLRGTVTANK 476 (627)
Q Consensus 408 ~~G~kv~~LG~l-n~~---e~ln~~g~~~~~r~p~~L~irvv~Gnsl-----taavv~~~ip--~~~~~V~l~Gatg~~k 476 (627)
+-|=+|+.+|.. ..+ |-.+-.... +.+.|++| .....-++ ||+..+.+.- +...+|++.||+| -
T Consensus 80 ~~GdrV~~~~~~~~~G~~AEy~~v~a~~-~~~~P~~l--s~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaG--g 154 (326)
T COG0604 80 KVGDRVAALGGVGRDGGYAEYVVVPADW-LVPLPDGL--SFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAG--G 154 (326)
T ss_pred CCCCEEEEccCCCCCCcceeEEEecHHH-ceeCCCCC--CHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCc--h
Confidence 678888888511 111 223333332 22335522 22233333 7777777722 1267899999998 9
Q ss_pred hHHHHHHHHhccCceEEe--cchhhhHHHHhhCchhh
Q 006894 477 VANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEA 511 (627)
Q Consensus 477 ig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~ 511 (627)
||++.++.+...|..+.. .+.++.+ +.+++....
T Consensus 155 VG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd~ 190 (326)
T COG0604 155 VGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGADH 190 (326)
T ss_pred HHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCCE
Confidence 999999988888854333 6667777 555555543
No 468
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=63.85 E-value=20 Score=36.82 Aligned_cols=41 Identities=24% Similarity=0.271 Sum_probs=34.3
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHH
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~ 504 (627)
....|++.|+++ .+|.++++.+...|.++.+ +++++.+.++
T Consensus 166 ~~~~vlI~g~~~--~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~ 208 (342)
T cd08266 166 PGETVLVHGAGS--GVGSAAIQIAKLFGATVIATAGSEDKLERAK 208 (342)
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 456899999997 9999999998889999887 7777777664
No 469
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=63.81 E-value=10 Score=40.23 Aligned_cols=38 Identities=18% Similarity=0.262 Sum_probs=33.4
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHh
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 505 (627)
+|.++||- .+|.++|..|.+.|.+|.+ |+++..+.+++
T Consensus 2 kI~IiGaG---a~G~ala~~L~~~g~~V~l~~r~~~~~~~i~~ 41 (326)
T PRK14620 2 KISILGAG---SFGTAIAIALSSKKISVNLWGRNHTTFESINT 41 (326)
T ss_pred EEEEECcC---HHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH
Confidence 48899996 9999999999999999988 88887887775
No 470
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=63.64 E-value=6.6 Score=41.59 Aligned_cols=27 Identities=15% Similarity=0.215 Sum_probs=23.9
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEE
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVA 493 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~ 493 (627)
+|+++|+|| =||+.+++.|+++|.++.
T Consensus 2 kilITGgtG--~iG~~l~~~L~~~g~~~v 28 (352)
T PRK10084 2 KILVTGGAG--FIGSAVVRHIINNTQDSV 28 (352)
T ss_pred eEEEECCCc--HHhHHHHHHHHHhCCCeE
Confidence 589999999 999999999999886533
No 471
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=63.48 E-value=10 Score=41.09 Aligned_cols=74 Identities=18% Similarity=0.199 Sum_probs=52.6
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCchhhcccceecc--chh----hcc---------
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPVEAQHNLVLST--SYA----AHK--------- 525 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~~~~~~lv~~~--~~~----~a~--------- 525 (627)
..+|++.|.- -||.--|+...--|.+|++ +|-+|+..|...-...- ....+| .++ +|+
T Consensus 168 ~~kv~iiGGG---vvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv--~~~~st~~~iee~v~~aDlvIgaVLIp 242 (371)
T COG0686 168 PAKVVVLGGG---VVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRV--HTLYSTPSNIEEAVKKADLVIGAVLIP 242 (371)
T ss_pred CccEEEECCc---cccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCcee--EEEEcCHHHHHHHhhhccEEEEEEEec
Confidence 4578888876 7899999999999999999 99999988865522210 111222 122 222
Q ss_pred ---------HH-HhcCCCCcEEeeCc
Q 006894 526 ---------TE-QARAPKGTIFIPYT 541 (627)
Q Consensus 526 ---------~e-~~~a~~G~~~~~~s 541 (627)
+| +++++||++++|++
T Consensus 243 gakaPkLvt~e~vk~MkpGsVivDVA 268 (371)
T COG0686 243 GAKAPKLVTREMVKQMKPGSVIVDVA 268 (371)
T ss_pred CCCCceehhHHHHHhcCCCcEEEEEE
Confidence 44 89999999999987
No 472
>KOG3011 consensus Ubiquitin-conjugating enzyme [Posttranslational modification, protein turnover, chaperones]
Probab=63.38 E-value=8.3 Score=40.24 Aligned_cols=134 Identities=16% Similarity=0.325 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhch------hh---hhhhcccCCCcCcCCChhhhhhhhhHHHHHHHHH----HHHHHH
Q 006894 128 VILTILVHMGPVEFLYYWFHRALHH------HY---LYSRYHSHHHSSVVTEPITSVIHPFAEHIVYFLL----FAIPLV 194 (627)
Q Consensus 128 li~~lll~~l~~Df~~Yw~HRllH~------~~---ly~r~H~~HH~s~~p~~~ta~~~hplE~ll~~~l----~~iPll 194 (627)
.+++.+...+..||..=.+|.+--. |. -+-+ =+.||.. |++-.+..++|.+..... ...|.-
T Consensus 109 ~~La~~aG~i~AD~~SGl~HWaaD~~Gsv~tP~vG~~f~r-freHH~d----P~tITr~~f~~~~~ll~~a~~f~v~~~d 183 (293)
T KOG3011|consen 109 PALAAYAGYITADLGSGVYHWAADNYGSVSTPWVGRQFER-FQEHHKD----PWTITRRQFANNLHLLARAYTFIVLPLD 183 (293)
T ss_pred HHHHHHHHHHHHhhhcceeEeeccccCccccchhHHHHHH-HHhccCC----cceeeHHHHhhhhHHHHHhheeEecCHH
Confidence 5666667778899999888987542 11 2334 5667764 566667777776432211 111221
Q ss_pred HHH--HhhhhhHHHHHHHHHHHHHHHhhcccCceecccccc--cccCCcccccCChhhhhhhhcC-CCCCcCCCchhhhh
Q 006894 195 TTM--VLKNASIASFVGYIIYVDFMNNMGHCNFEFIPMWLF--TVFPPLKFLMYTPSYHSLHHTQ-FRTNYSLFMPIYDY 269 (627)
Q Consensus 195 ~~~--llg~~s~~~~~~y~i~~~~~~~~~Hsg~e~~P~~~~--~~lp~L~~li~tp~~H~lHH~~-~~~NYG~~f~~WDr 269 (627)
.+. ....+-+.++.+++++..-..-+.|.=..+ |.+.. +..+ ++....+|..||.. .++|||....+|.+
T Consensus 184 ~~~q~~~~h~fV~~~~i~v~~tnQiHkWsHTy~gL-P~wVv~LQd~h----lilpRkhH~iHH~aPh~~yyCI~tGw~N~ 258 (293)
T KOG3011|consen 184 LAFQDPVFHGFVFLFAICVLFTNQIHKWSHTYSGL-PPWVVLLQDMH----LILPRKHHRIHHVAPHNTYYCIVSGWWNW 258 (293)
T ss_pred HHhhcccHHHHHHHHHHHHHHHHHHHHHHhhhccC-chHHHHHhhcc----eecccccccccccCccccceEEeechhhc
Confidence 110 000111233334455555666788865555 55422 1122 34568899999998 79999999999987
Q ss_pred hc
Q 006894 270 IY 271 (627)
Q Consensus 270 LF 271 (627)
..
T Consensus 259 ~L 260 (293)
T KOG3011|consen 259 VL 260 (293)
T ss_pred hH
Confidence 53
No 473
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=63.08 E-value=20 Score=36.88 Aligned_cols=41 Identities=10% Similarity=0.033 Sum_probs=33.8
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHH
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~ 504 (627)
....|++.|++| .+|.++++.+..+|.++.. +++++.+.++
T Consensus 142 ~~~~vlI~g~~~--~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~ 184 (324)
T cd08244 142 PGDVVLVTAAAG--GLGSLLVQLAKAAGATVVGAAGGPAKTALVR 184 (324)
T ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 356799999998 9999998888889999877 7777777664
No 474
>TIGR00658 orni_carb_tr ornithine carbamoyltransferase. Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily.
Probab=63.05 E-value=44 Score=35.80 Aligned_cols=106 Identities=21% Similarity=0.273 Sum_probs=71.1
Q ss_pred cccchhhHHHHHHHHHHHHHHHHcCCcEEEeccc----ccccc-------cccCCceeEecCCC---------cccceee
Q 006894 386 YNLPWRREAINSLIEEAILEADAKGVKVISLGLL----NQGEE-------LNRNGEIYLERQPN---------KLKIKVV 445 (627)
Q Consensus 386 y~~~~~~~~in~~Ie~Ai~~A~~~G~kv~~LG~l----n~~e~-------ln~~g~~~~~r~p~---------~L~irvv 445 (627)
|+-|+-+- =.. -|.|+ .++|++++.|+.= +++|. |....-+.+.|+|+ ..++.|+
T Consensus 46 F~epSTRT-R~S-Fe~A~---~~LGg~~i~l~~~~ss~~kgEsl~Dt~~vls~y~D~iv~R~~~~~~~~~~a~~~~vPVI 120 (304)
T TIGR00658 46 FEKPSTRT-RVS-FEVAA---YQLGGHPLYLNPNDLQLGRGESIKDTARVLSRYVDGIMARVYKHEDVEELAKYASVPVI 120 (304)
T ss_pred ecCCCcch-HHH-HHHHH---HHcCCCEEEeCCccccCCCCCCHHHHHHHHHHhCCEEEEECCChHHHHHHHHhCCCCEE
Confidence 45555443 222 45554 5699999999643 33444 35566678889887 3568888
Q ss_pred cCCh--------h-HHHHHHhcCCC-CCcEEEEeccCCChhhHHHHHHHHhccCceEEecchh
Q 006894 446 DGSS--------L-AAAVVVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKD 498 (627)
Q Consensus 446 ~Gns--------l-taavv~~~ip~-~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l~~~~ 498 (627)
++.+ | =..++.+..+. +..+|+.+|..+ .+.+..+.+|.+-|++|.+-.++
T Consensus 121 Na~~~~~HPtQaL~Dl~Ti~e~~g~l~g~~v~~vGd~~--~v~~Sl~~~l~~~g~~v~~~~P~ 181 (304)
T TIGR00658 121 NGLTDLFHPCQALADLLTIIEHFGKLKGVKVVYVGDGN--NVCNSLMLAGAKLGMDVVVATPE 181 (304)
T ss_pred ECCCCCCChHHHHHHHHHHHHHhCCCCCcEEEEEeCCC--chHHHHHHHHHHcCCEEEEECCc
Confidence 8654 1 13455555442 456899999986 89999999999999999993333
No 475
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=63.03 E-value=12 Score=41.31 Aligned_cols=37 Identities=19% Similarity=0.135 Sum_probs=32.1
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHh
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 505 (627)
+|.++|.. -+|..+|..|++ |.+|+. +++++.+++++
T Consensus 2 kI~VIGlG---yvGl~~A~~lA~-G~~VigvD~d~~kv~~l~~ 40 (388)
T PRK15057 2 KITISGTG---YVGLSNGLLIAQ-NHEVVALDILPSRVAMLND 40 (388)
T ss_pred EEEEECCC---HHHHHHHHHHHh-CCcEEEEECCHHHHHHHHc
Confidence 58889877 999999987775 999998 89999998886
No 476
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=62.51 E-value=18 Score=37.83 Aligned_cols=54 Identities=19% Similarity=0.209 Sum_probs=36.7
Q ss_pred hHHHHHHhcCCCCCcEEEEe-ccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHh
Q 006894 450 LAAAVVVNSLPKTTAHVLLR-GTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (627)
Q Consensus 450 ltaavv~~~ip~~~~~V~l~-Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 505 (627)
+||+..++.......+|++. |++| .||.+.++.....|.+|.. +++++.+.+++
T Consensus 130 ~ta~~~~~~~~~~~~~vlv~~~g~g--~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~ 186 (324)
T cd08291 130 LTALGMLETAREEGAKAVVHTAAAS--ALGRMLVRLCKADGIKVINIVRRKEQVDLLKK 186 (324)
T ss_pred HHHHHHHHhhccCCCcEEEEccCcc--HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 44444333333333456666 8888 9999998876678999876 78888877764
No 477
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=61.59 E-value=14 Score=40.00 Aligned_cols=29 Identities=17% Similarity=0.148 Sum_probs=24.4
Q ss_pred cEEEEeccCCChhhHHHHHHHHhcc-CceEEe
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQM-GIKVAT 494 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~-~~~v~l 494 (627)
.+|+++|||| .+|+.+.+.|.+. ..++..
T Consensus 4 ~~V~I~GatG--~iG~~l~~~L~~~p~~el~~ 33 (349)
T PRK08664 4 LKVGILGATG--MVGQRFVQLLANHPWFEVTA 33 (349)
T ss_pred cEEEEECCCC--HHHHHHHHHHHcCCCceEEE
Confidence 4799999999 9999999999964 556555
No 478
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=61.40 E-value=19 Score=41.54 Aligned_cols=41 Identities=20% Similarity=0.165 Sum_probs=34.1
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHh
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 505 (627)
..++|+|.|+- -+|...++.+...|.+|.. ++.+|.+..++
T Consensus 164 pg~kVlViGaG---~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes 206 (509)
T PRK09424 164 PPAKVLVIGAG---VAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES 206 (509)
T ss_pred CCCEEEEECCc---HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 37799999998 8999999999888998877 77777776654
No 479
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=61.37 E-value=13 Score=39.10 Aligned_cols=39 Identities=15% Similarity=0.176 Sum_probs=34.0
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 506 (627)
+|.++|+ | .+|+++|..|++.|.+|.+ |++++.++++++
T Consensus 3 kI~iiG~-G--~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~ 43 (325)
T PRK00094 3 KIAVLGA-G--SWGTALAIVLARNGHDVTLWARDPEQAAEINAD 43 (325)
T ss_pred EEEEECC-C--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHc
Confidence 5899997 5 9999999999999999988 888888888764
No 480
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=61.06 E-value=20 Score=38.69 Aligned_cols=42 Identities=12% Similarity=0.126 Sum_probs=34.6
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHh
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 505 (627)
....|++.|++| .||.++++++...|.++.. +++++.+.+++
T Consensus 193 ~g~~vlV~ga~g--~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~ 236 (393)
T cd08246 193 PGDNVLIWGASG--GLGSMAIQLARAAGANPVAVVSSEEKAEYCRA 236 (393)
T ss_pred CCCEEEEECCCc--HHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH
Confidence 456999999998 9999999888788999766 77888877754
No 481
>PRK12320 hypothetical protein; Provisional
Probab=60.95 E-value=9.2 Score=45.60 Aligned_cols=28 Identities=21% Similarity=0.338 Sum_probs=26.4
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
+|+|+|++| .||+.+|+.|.++|.+|..
T Consensus 2 kILVTGAaG--FIGs~La~~Ll~~G~~Vi~ 29 (699)
T PRK12320 2 QILVTDATG--AVGRSVTRQLIAAGHTVSG 29 (699)
T ss_pred EEEEECCCC--HHHHHHHHHHHhCCCEEEE
Confidence 589999999 9999999999999999887
No 482
>KOG1600 consensus Fatty acid desaturase [Lipid transport and metabolism]
Probab=60.86 E-value=7.9 Score=41.71 Aligned_cols=22 Identities=23% Similarity=0.465 Sum_probs=16.6
Q ss_pred hhhhhccchhhHHHHHHHHHHH
Q 006894 89 VDRERNWDDQIVFNGLIFYIVR 110 (627)
Q Consensus 89 vdrE~~~~n~iil~~li~~l~~ 110 (627)
.+||+.|.|.++++++-....+
T Consensus 34 ~~~~~~w~nv~~~~~l~~~a~y 55 (321)
T KOG1600|consen 34 WKRELVWRNVVLFSALHIVALY 55 (321)
T ss_pred hhcchhhhhhHHHHHHHHHHHH
Confidence 6899999998887777554433
No 483
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=60.69 E-value=12 Score=41.39 Aligned_cols=29 Identities=31% Similarity=0.286 Sum_probs=26.8
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
.+.|+++|+. ++|.++|+.|.++|.+|++
T Consensus 5 ~k~v~iiG~g---~~G~~~A~~l~~~G~~V~~ 33 (450)
T PRK14106 5 GKKVLVVGAG---VSGLALAKFLKKLGAKVIL 33 (450)
T ss_pred CCEEEEECCC---HHHHHHHHHHHHCCCEEEE
Confidence 4689999987 7999999999999999999
No 484
>PRK00779 ornithine carbamoyltransferase; Provisional
Probab=60.61 E-value=33 Score=36.84 Aligned_cols=93 Identities=17% Similarity=0.189 Sum_probs=64.4
Q ss_pred HHHHcCCcEEEecc----ccccccc-------ccCCceeEecCCC---------cccceeecCChh---------HHHHH
Q 006894 405 EADAKGVKVISLGL----LNQGEEL-------NRNGEIYLERQPN---------KLKIKVVDGSSL---------AAAVV 455 (627)
Q Consensus 405 ~A~~~G~kv~~LG~----ln~~e~l-------n~~g~~~~~r~p~---------~L~irvv~Gnsl---------taavv 455 (627)
-|.++|++++.|+. +.++|.+ ....-+.+.|+|+ ..++.|+++-+= =+.++
T Consensus 64 A~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~~l~~~~D~iv~R~~~~~~~~~~a~~~~vPVINag~~~~HPtQaL~Dl~Ti 143 (304)
T PRK00779 64 GMAQLGGHAIFLSPRDTQLGRGEPIEDTARVLSRYVDAIMIRTFEHETLEELAEYSTVPVINGLTDLSHPCQILADLLTI 143 (304)
T ss_pred HHHHcCCcEEEECcccccCCCCcCHHHHHHHHHHhCCEEEEcCCChhHHHHHHHhCCCCEEeCCCCCCChHHHHHHHHHH
Confidence 35789999999964 3344443 3446677888877 356788877541 13445
Q ss_pred HhcCCC-CCcEEEEeccCCChhhHHHHHHHHhccCceEEecchhh
Q 006894 456 VNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVATICKDD 499 (627)
Q Consensus 456 ~~~ip~-~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l~~~~~ 499 (627)
.+.... +..+|+++|..+ .+.+..+..|.+-|.+|.+-.++.
T Consensus 144 ~e~~g~l~gl~i~~vGd~~--~v~~Sl~~~l~~~g~~v~~~~P~~ 186 (304)
T PRK00779 144 YEHRGSLKGLKVAWVGDGN--NVANSLLLAAALLGFDLRVATPKG 186 (304)
T ss_pred HHHhCCcCCcEEEEEeCCC--ccHHHHHHHHHHcCCEEEEECCcc
Confidence 444432 346899999965 899999999999999999944443
No 485
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=60.54 E-value=21 Score=36.75 Aligned_cols=41 Identities=20% Similarity=0.156 Sum_probs=31.0
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCce-EEe--cchhhhHHHHh
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIK-VAT--ICKDDYEKLKL 505 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~-v~l--~~~~~~~~l~~ 505 (627)
..+.|++.|+ | -||.+.++.+...|.+ |.. ++++|++..++
T Consensus 120 ~g~~VlV~G~-G--~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~ 163 (280)
T TIGR03366 120 KGRRVLVVGA-G--MLGLTAAAAAAAAGAARVVAADPSPDRRELALS 163 (280)
T ss_pred CCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 4568899987 6 8999999987778987 665 67777765543
No 486
>KOG0068 consensus D-3-phosphoglycerate dehydrogenase, D-isomer-specific 2-hydroxy acid dehydrogenase superfamily [Amino acid transport and metabolism]
Probab=60.31 E-value=42 Score=36.94 Aligned_cols=128 Identities=20% Similarity=0.198 Sum_probs=74.0
Q ss_pred HHHHHHHcCCcEEEecc--ccccc-ccccCCceeEecCCCcccceeecCChhHHHH--------HHhcCCCC--------
Q 006894 402 AILEADAKGVKVISLGL--LNQGE-ELNRNGEIYLERQPNKLKIKVVDGSSLAAAV--------VVNSLPKT-------- 462 (627)
Q Consensus 402 Ai~~A~~~G~kv~~LG~--ln~~e-~ln~~g~~~~~r~p~~L~irvv~Gnsltaav--------v~~~ip~~-------- 462 (627)
=+++|-+.|.||+|+.. .|+.. .---.-++.|.+-|. +||..||= .-++|++.
T Consensus 62 dvl~aa~~~lkvVgrag~G~dNVDL~AAte~gi~Vvn~P~--------~Ns~saAEltigli~SLaR~i~~A~~s~k~g~ 133 (406)
T KOG0068|consen 62 DVLEAAAGGLKVVGRAGIGVDNVDLKAATENGILVVNTPT--------ANSRSAAELTIGLILSLARQIGQASASMKEGK 133 (406)
T ss_pred HHHHhhcCCeEEEEecccCccccChhhHHhCCeEEEeCCC--------CChHHHHHHHHHHHHHHhhhcchhheeeecCc
Confidence 35667889999999853 44420 011122345555555 99998873 34666661
Q ss_pred ------------CcEEEEeccCCChhhHHHHHHHHhccCceEEe----cchhhhHHHH------hhCchhhcccce-e--
Q 006894 463 ------------TAHVLLRGTVTANKVANAVASSLCQMGIKVAT----ICKDDYEKLK------LRIPVEAQHNLV-L-- 517 (627)
Q Consensus 463 ------------~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l----~~~~~~~~l~------~~~~~~~~~~lv-~-- 517 (627)
-+++.+.|- | +||+-+|+-+---|-+|+. ...++.++.- +|+-.. ...+- .
T Consensus 134 wnr~~~~G~el~GKTLgvlG~-G--rIGseVA~r~k~~gm~vI~~dpi~~~~~~~a~gvq~vsl~Eil~~-ADFitlH~P 209 (406)
T KOG0068|consen 134 WNRVKYLGWELRGKTLGVLGL-G--RIGSEVAVRAKAMGMHVIGYDPITPMALAEAFGVQLVSLEEILPK-ADFITLHVP 209 (406)
T ss_pred eeecceeeeEEeccEEEEeec-c--cchHHHHHHHHhcCceEEeecCCCchHHHHhccceeeeHHHHHhh-cCEEEEccC
Confidence 457777774 5 9999999988778999888 2333333331 111100 00000 0
Q ss_pred ccchhhcc---HHHhcCCCCcEEeeCc
Q 006894 518 STSYAAHK---TEQARAPKGTIFIPYT 541 (627)
Q Consensus 518 ~~~~~~a~---~e~~~a~~G~~~~~~s 541 (627)
.|.-.+.. +.-+++|||+.++.++
T Consensus 210 LtP~T~~lin~~tfA~mKkGVriIN~a 236 (406)
T KOG0068|consen 210 LTPSTEKLLNDETFAKMKKGVRIINVA 236 (406)
T ss_pred CCcchhhccCHHHHHHhhCCcEEEEec
Confidence 01111111 4468999999999888
No 487
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=60.11 E-value=22 Score=37.85 Aligned_cols=41 Identities=22% Similarity=0.243 Sum_probs=33.5
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHh
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKL 505 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~ 505 (627)
...+|++.|+ | .||.+.++++...|.+|.. ++++|++.+++
T Consensus 166 ~g~~VlV~G~-G--~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~ 208 (349)
T TIGR03201 166 KGDLVIVIGA-G--GVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKG 208 (349)
T ss_pred CCCEEEEECC-C--HHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH
Confidence 3568999999 8 9999999888888998776 78888876643
No 488
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=60.08 E-value=12 Score=38.93 Aligned_cols=38 Identities=18% Similarity=0.229 Sum_probs=32.7
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhh
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLR 506 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~ 506 (627)
+|.++|+. .+|.++|..|++.|.+|++ | +++.+.++++
T Consensus 2 kI~IiG~G---~iG~~~a~~L~~~g~~V~~~~r-~~~~~~~~~~ 41 (305)
T PRK12921 2 RIAVVGAG---AVGGTFGGRLLEAGRDVTFLVR-PKRAKALRER 41 (305)
T ss_pred eEEEECCC---HHHHHHHHHHHHCCCceEEEec-HHHHHHHHhC
Confidence 58899987 8999999999999999988 6 7778887753
No 489
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=59.85 E-value=9.7 Score=41.38 Aligned_cols=30 Identities=33% Similarity=0.467 Sum_probs=26.6
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCc-eEEe
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGI-KVAT 494 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~-~v~l 494 (627)
..++|+++|+- -+|+.+|.+|++.|+ ++++
T Consensus 23 ~~~~VlVvG~G---glGs~va~~La~aGvg~i~l 53 (339)
T PRK07688 23 REKHVLIIGAG---ALGTANAEMLVRAGVGKVTI 53 (339)
T ss_pred cCCcEEEECCC---HHHHHHHHHHHHcCCCeEEE
Confidence 47789999996 799999999999999 6666
No 490
>PRK13243 glyoxylate reductase; Reviewed
Probab=59.80 E-value=25 Score=38.02 Aligned_cols=77 Identities=13% Similarity=0.150 Sum_probs=46.7
Q ss_pred CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhC-----ch-hhcccce-eccchhh---cc---H
Q 006894 462 TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRI-----PV-EAQHNLV-LSTSYAA---HK---T 526 (627)
Q Consensus 462 ~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~-----~~-~~~~~lv-~~~~~~~---a~---~ 526 (627)
..++|.++|- | .||+.+|+.|...|.+|.. |+.+.-....... .+ -.+.++| ....+.+ .. .
T Consensus 149 ~gktvgIiG~-G--~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP~t~~T~~~i~~~ 225 (333)
T PRK13243 149 YGKTIGIIGF-G--RIGQAVARRAKGFGMRILYYSRTRKPEAEKELGAEYRPLEELLRESDFVSLHVPLTKETYHMINEE 225 (333)
T ss_pred CCCEEEEECc-C--HHHHHHHHHHHHCCCEEEEECCCCChhhHHHcCCEecCHHHHHhhCCEEEEeCCCChHHhhccCHH
Confidence 4678999998 5 9999999999989999988 4332211101000 00 0123333 1112211 11 4
Q ss_pred HHhcCCCCcEEeeCc
Q 006894 527 EQARAPKGTIFIPYT 541 (627)
Q Consensus 527 e~~~a~~G~~~~~~s 541 (627)
.-+.+|+|+.++..+
T Consensus 226 ~~~~mk~ga~lIN~a 240 (333)
T PRK13243 226 RLKLMKPTAILVNTA 240 (333)
T ss_pred HHhcCCCCeEEEECc
Confidence 467899999999998
No 491
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=59.77 E-value=11 Score=41.23 Aligned_cols=120 Identities=13% Similarity=0.148 Sum_probs=65.3
Q ss_pred cEEEEeccCCChhhHHHHHHHHh-ccCce---EEe----cchhhhHHHHhh------Cchh--hcccceec-c-chhhcc
Q 006894 464 AHVLLRGTVTANKVANAVASSLC-QMGIK---VAT----ICKDDYEKLKLR------IPVE--AQHNLVLS-T-SYAAHK 525 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~-~~~~~---v~l----~~~~~~~~l~~~------~~~~--~~~~lv~~-~-~~~~a~ 525 (627)
-+|.++|||| -+|+.+.+.|. .+... +.+ ++..+--.++.+ +..+ .+.++|+. + +-..++
T Consensus 6 ~~VaIvGATG--~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~~~l~v~~~~~~~~~~~Divf~a~~~~~s~~ 83 (347)
T PRK06728 6 YHVAVVGATG--AVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKGREIIIQEAKINSFEGVDIAFFSAGGEVSRQ 83 (347)
T ss_pred CEEEEEeCCC--HHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCCcceEEEeCCHHHhcCCCEEEECCChHHHHH
Confidence 4899999999 99999999999 47776 333 222221111110 1111 22344422 2 122222
Q ss_pred HHHhcCCCCcEEeeCcCCCCc-CCCCCeeEeccCccccCCCccccccccccccch-hHHH-HHHhHHHhhhcCCCC
Q 006894 526 TEQARAPKGTIFIPYTQIPPR-KLRKDCFYHSTPAMIIPPSLSNMHSCENWLGRR-VMSA-WRIAGIIHALEGWDL 598 (627)
Q Consensus 526 ~e~~~a~~G~~~~~~sq~P~~-~~R~dc~~~~~p~~~~P~~~~~~~~~e~~~pr~-~~~A-c~a~~~~~alEg~~~ 598 (627)
-.++-+.+|+.++|-| .. .+.+|+-|+--..+. +.+++ . ++ +.-. |.+-+|+++|-....
T Consensus 84 ~~~~~~~~G~~VID~S---s~fR~~~~vplvvPEvN~--e~i~~------~--~~iIanPnC~tt~~~laL~PL~~ 146 (347)
T PRK06728 84 FVNQAVSSGAIVIDNT---SEYRMAHDVPLVVPEVNA--HTLKE------H--KGIIAVPNCSALQMVTALQPIRK 146 (347)
T ss_pred HHHHHHHCCCEEEECc---hhhcCCCCCCeEeCCcCH--HHHhc------c--CCEEECCCCHHHHHHHHHHHHHH
Confidence 3344457899999998 55 555666643211110 12221 1 23 2222 999999998876543
No 492
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=59.63 E-value=8.3 Score=41.21 Aligned_cols=28 Identities=21% Similarity=0.270 Sum_probs=25.0
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCce--EEe
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIK--VAT 494 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~--v~l 494 (627)
+|.++|||| .||+++|..|+..|.. |.+
T Consensus 2 kI~IiGatG--~vG~~~a~~l~~~g~~~~v~l 31 (309)
T cd05294 2 KVSIIGASG--RVGSATALLLAKEDVVKEINL 31 (309)
T ss_pred EEEEECCCC--hHHHHHHHHHHhCCCCCEEEE
Confidence 689999999 9999999999988875 666
No 493
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=59.37 E-value=24 Score=36.92 Aligned_cols=53 Identities=15% Similarity=0.193 Sum_probs=38.6
Q ss_pred hHHHHHHhcCC-CCCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHH
Q 006894 450 LAAAVVVNSLP-KTTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (627)
Q Consensus 450 ltaavv~~~ip-~~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~ 504 (627)
+||+-.++.++ +....|++.|+.| .+|.++++.+.+.|++|.+ +++++.+.++
T Consensus 152 ~ta~~~~~~~~~~~~~~vlV~g~~~--~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 207 (341)
T cd08297 152 VTVYKALKKAGLKPGDWVVISGAGG--GLGHLGVQYAKAMGLRVIAIDVGDEKLELAK 207 (341)
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCc--hHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence 34443444442 2456899999987 8999999988889999888 7777776663
No 494
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=59.21 E-value=9.3 Score=39.53 Aligned_cols=40 Identities=18% Similarity=0.270 Sum_probs=31.8
Q ss_pred EEEeccCCChhhHHHHHHHHhccC----ceEEe--cchhhhHHHHhhC
Q 006894 466 VLLRGTVTANKVANAVASSLCQMG----IKVAT--ICKDDYEKLKLRI 507 (627)
Q Consensus 466 V~l~Gatg~~kig~ava~~L~~~~----~~v~l--~~~~~~~~l~~~~ 507 (627)
|.++||.| .+|+.+|..|++.| .++.| .++++++....++
T Consensus 1 I~IIGagG--~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl 46 (263)
T cd00650 1 IAVIGAGG--NVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDL 46 (263)
T ss_pred CEEECCCC--hHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHH
Confidence 57899988 89999999999888 67887 6667766655543
No 495
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways. In this reaction, two atoms of dioxygen are reduced to one hydroxyl group and one H2O molecule by the concomitant oxidation of NAD(P)H []. P-hydroxybenzoate hydroxylase from Pseudomonas fluorescens contains this sequence motif (present in in flavoprotein hydroxylases) with a putative dual function in FAD and NADPH binding [].; PDB: 2Y6R_B 2XYO_C 2Y6Q_C 3P9U_D 2XDO_C 1FOH_D 1PN0_A 3IHG_C 2QA2_A 2VOU_C ....
Probab=59.04 E-value=11 Score=39.08 Aligned_cols=28 Identities=29% Similarity=0.309 Sum_probs=24.2
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT 494 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l 494 (627)
.+|+++||- =.|.++|.+|+|+|++|++
T Consensus 2 ~dV~IvGaG---~aGl~~A~~L~~~G~~v~i 29 (356)
T PF01494_consen 2 YDVAIVGAG---PAGLAAALALARAGIDVTI 29 (356)
T ss_dssp EEEEEE--S---HHHHHHHHHHHHTTCEEEE
T ss_pred ceEEEECCC---HHHHHHHHHHHhccccccc
Confidence 479999998 7899999999999999999
No 496
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=59.02 E-value=12 Score=38.86 Aligned_cols=35 Identities=17% Similarity=0.243 Sum_probs=30.7
Q ss_pred cEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhH
Q 006894 464 AHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYE 501 (627)
Q Consensus 464 ~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~ 501 (627)
++|.++|+. .+|.++|..|++.|.+|++ +++++.+
T Consensus 4 ~kI~VIG~G---~mG~~ia~~la~~g~~V~~~d~~~~~~~ 40 (282)
T PRK05808 4 QKIGVIGAG---TMGNGIAQVCAVAGYDVVMVDISDAAVD 40 (282)
T ss_pred cEEEEEccC---HHHHHHHHHHHHCCCceEEEeCCHHHHH
Confidence 469999995 9999999999999999999 7777765
No 497
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=58.88 E-value=24 Score=37.05 Aligned_cols=47 Identities=11% Similarity=0.190 Sum_probs=35.2
Q ss_pred HHhcCCC-CCcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHH
Q 006894 455 VVNSLPK-TTAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLK 504 (627)
Q Consensus 455 v~~~ip~-~~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~ 504 (627)
.++.++- ....|++.| +| .+|.++++.+...|.++.. +++++.+.++
T Consensus 155 ~~~~~~~~~~~~vlV~g-~g--~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~ 204 (333)
T cd08296 155 ALRNSGAKPGDLVAVQG-IG--GLGHLAVQYAAKMGFRTVAISRGSDKADLAR 204 (333)
T ss_pred HHHhcCCCCCCEEEEEC-Cc--HHHHHHHHHHHHCCCeEEEEeCChHHHHHHH
Confidence 3444432 345899999 77 9999998877788999877 7778877774
No 498
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=58.76 E-value=7.2 Score=40.82 Aligned_cols=33 Identities=27% Similarity=0.408 Sum_probs=27.6
Q ss_pred EEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhh
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDY 500 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~ 500 (627)
.|+|.|+|| . |+.+|+.|+++|.+|+. ++++.-
T Consensus 2 ~ILvlGGT~--e-gr~la~~L~~~g~~v~~s~~t~~~~ 36 (256)
T TIGR00715 2 TVLLMGGTV--D-SRAIAKGLIAQGIEILVTVTTSEGK 36 (256)
T ss_pred eEEEEechH--H-HHHHHHHHHhCCCeEEEEEccCCcc
Confidence 689999997 7 99999999999999888 554443
No 499
>PLN02712 arogenate dehydrogenase
Probab=58.57 E-value=28 Score=41.36 Aligned_cols=75 Identities=16% Similarity=0.228 Sum_probs=46.3
Q ss_pred CcEEEEeccCCChhhHHHHHHHHhccCceEEe--cchhhhHHHHhhCch-------h---hcccce-eccchhh---ccH
Q 006894 463 TAHVLLRGTVTANKVANAVASSLCQMGIKVAT--ICKDDYEKLKLRIPV-------E---AQHNLV-LSTSYAA---HKT 526 (627)
Q Consensus 463 ~~~V~l~Gatg~~kig~ava~~L~~~~~~v~l--~~~~~~~~l~~~~~~-------~---~~~~lv-~~~~~~~---a~~ 526 (627)
+.+|.++| .| .+|.++|+.|.+.|.+|.. |+.++ +. ..++.. + .+.++| ..++.+. ...
T Consensus 52 ~~kIgIIG-~G--~mG~slA~~L~~~G~~V~~~dr~~~~-~~-A~~~Gv~~~~d~~e~~~~~aDvViLavP~~~~~~vl~ 126 (667)
T PLN02712 52 QLKIAIIG-FG--NYGQFLAKTLISQGHTVLAHSRSDHS-LA-ARSLGVSFFLDPHDLCERHPDVILLCTSIISTENVLK 126 (667)
T ss_pred CCEEEEEc-cC--HHHHHHHHHHHHCCCEEEEEeCCHHH-HH-HHHcCCEEeCCHHHHhhcCCCEEEEcCCHHHHHHHHH
Confidence 46899999 67 9999999999999998877 54332 21 222210 1 123545 2333221 112
Q ss_pred H-H-hcCCCCcEEeeCcC
Q 006894 527 E-Q-ARAPKGTIFIPYTQ 542 (627)
Q Consensus 527 e-~-~~a~~G~~~~~~sq 542 (627)
+ . ..+++|++++|++-
T Consensus 127 ~l~~~~l~~g~iVvDv~S 144 (667)
T PLN02712 127 SLPLQRLKRNTLFVDVLS 144 (667)
T ss_pred hhhhhcCCCCeEEEECCC
Confidence 2 1 34789999999984
No 500
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=58.31 E-value=14 Score=37.82 Aligned_cols=39 Identities=15% Similarity=0.188 Sum_probs=32.4
Q ss_pred EEEEeccCCChhhHHHHHHHHhccC---ceEEe--cchhhhHHHHhh
Q 006894 465 HVLLRGTVTANKVANAVASSLCQMG---IKVAT--ICKDDYEKLKLR 506 (627)
Q Consensus 465 ~V~l~Gatg~~kig~ava~~L~~~~---~~v~l--~~~~~~~~l~~~ 506 (627)
+|.++|. | .+|+++++.|.+.| .+|.+ |++++.++++++
T Consensus 4 ~I~iIG~-G--~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~ 47 (267)
T PRK11880 4 KIGFIGG-G--NMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEE 47 (267)
T ss_pred EEEEEec-h--HHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHh
Confidence 6899997 6 99999999999887 56666 888888877764
Done!