Query 006903
Match_columns 626
No_of_seqs 568 out of 4706
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 12:00:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006903.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006903hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 1.7E-53 5.6E-58 435.8 19.4 259 340-616 9-290 (299)
2 4gt4_A Tyrosine-protein kinase 100.0 3.3E-53 1.1E-57 435.4 20.6 256 340-613 22-304 (308)
3 4aoj_A High affinity nerve gro 100.0 5.8E-53 2E-57 437.6 22.0 259 340-616 37-320 (329)
4 3omv_A RAF proto-oncogene seri 100.0 1.3E-52 4.3E-57 429.5 22.8 260 339-616 31-301 (307)
5 3hmm_A TGF-beta receptor type- 100.0 1.1E-51 3.8E-56 424.5 16.3 258 351-618 8-300 (303)
6 4b9d_A Serine/threonine-protei 100.0 1.9E-50 6.6E-55 419.2 19.1 241 351-608 29-276 (350)
7 3fpq_A Serine/threonine-protei 100.0 5.2E-50 1.8E-54 407.2 21.5 239 352-608 32-282 (290)
8 4g3f_A NF-kappa-beta-inducing 100.0 5.8E-50 2E-54 413.8 18.8 245 351-616 63-317 (336)
9 4ase_A Vascular endothelial gr 100.0 2.7E-50 9.2E-55 421.0 16.5 259 341-616 61-348 (353)
10 4fih_A Serine/threonine-protei 100.0 8.9E-50 3.1E-54 413.6 20.0 239 352-608 80-323 (346)
11 4fie_A Serine/threonine-protei 100.0 1.3E-48 4.4E-53 414.7 21.4 240 351-608 156-400 (423)
12 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.7E-49 9.3E-54 404.0 15.2 238 350-607 36-283 (311)
13 3hyh_A Carbon catabolite-derep 100.0 1.4E-48 4.8E-53 393.3 20.0 237 351-608 18-262 (275)
14 4g31_A Eukaryotic translation 100.0 4E-48 1.4E-52 396.5 18.4 240 351-608 10-279 (299)
15 3ubd_A Ribosomal protein S6 ki 100.0 1.1E-48 3.8E-53 399.4 13.5 238 351-608 29-281 (304)
16 4b99_A Mitogen-activated prote 100.0 1.6E-44 5.4E-49 383.8 22.4 249 351-608 59-344 (398)
17 4f9c_A Cell division cycle 7-r 100.0 4.4E-44 1.5E-48 376.2 21.8 247 351-608 26-352 (361)
18 3uto_A Twitchin; kinase, muscl 100.0 3.3E-43 1.1E-47 391.3 19.8 244 350-608 161-410 (573)
19 3v5w_A G-protein coupled recep 100.0 3.4E-43 1.2E-47 389.4 18.6 239 351-608 194-449 (689)
20 2qkw_B Protein kinase; three-h 100.0 6.2E-42 2.1E-46 355.4 24.2 262 351-617 44-317 (321)
21 3uim_A Brassinosteroid insensi 100.0 5.3E-42 1.8E-46 356.4 20.8 262 351-614 35-310 (326)
22 3s95_A LIMK-1, LIM domain kina 100.0 6.2E-42 2.1E-46 353.5 19.9 250 351-616 15-283 (310)
23 3p86_A Serine/threonine-protei 100.0 7.5E-42 2.6E-46 353.0 19.9 250 351-616 42-299 (309)
24 3soc_A Activin receptor type-2 100.0 7E-42 2.4E-46 355.3 18.3 257 350-616 28-319 (322)
25 4hcu_A Tyrosine-protein kinase 100.0 3.1E-41 1.1E-45 340.9 21.9 248 351-616 15-267 (269)
26 2psq_A Fibroblast growth facto 100.0 2.7E-41 9.1E-46 357.8 21.0 251 350-616 85-365 (370)
27 3sxs_A Cytoplasmic tyrosine-pr 100.0 3E-41 1E-45 340.6 19.0 249 351-617 13-266 (268)
28 3kul_A Ephrin type-A receptor 100.0 3.8E-41 1.3E-45 350.2 19.2 251 350-618 53-316 (325)
29 3fxz_A Serine/threonine-protei 100.0 1E-40 3.5E-45 342.5 22.0 240 351-608 25-269 (297)
30 1qcf_A Haematopoetic cell kina 100.0 4.1E-41 1.4E-45 366.2 19.9 249 351-617 193-446 (454)
31 1k9a_A Carboxyl-terminal SRC k 100.0 6E-41 2E-45 364.4 20.8 247 351-616 198-446 (450)
32 3cbl_A C-FES, proto-oncogene t 100.0 1.1E-41 3.6E-46 361.8 14.4 248 351-616 119-375 (377)
33 3gen_A Tyrosine-protein kinase 100.0 1E-40 3.5E-45 339.5 20.5 248 351-616 29-281 (283)
34 2qol_A Ephrin receptor; recept 100.0 4.2E-41 1.4E-45 356.6 18.2 249 350-616 49-310 (373)
35 2nru_A Interleukin-1 receptor- 100.0 2E-40 6.8E-45 341.5 21.7 256 352-615 37-306 (307)
36 2eva_A TAK1 kinase - TAB1 chim 100.0 2.2E-40 7.7E-45 341.6 22.1 250 351-616 13-264 (307)
37 3fe3_A MAP/microtubule affinit 100.0 8.9E-41 3E-45 347.7 19.0 239 351-609 20-265 (328)
38 1opk_A P150, C-ABL, proto-onco 100.0 9.1E-41 3.1E-45 367.1 19.4 250 350-616 224-479 (495)
39 4f0f_A Serine/threonine-protei 100.0 4.8E-40 1.7E-44 335.2 23.1 245 351-613 24-287 (287)
40 3zgw_A Maternal embryonic leuc 100.0 1.6E-40 5.5E-45 348.1 20.1 239 351-609 15-261 (347)
41 1tki_A Titin; serine kinase, m 100.0 1.6E-40 5.4E-45 345.0 19.7 243 351-608 10-257 (321)
42 3lb7_A RAF proto-oncogene seri 100.0 4.2E-40 1.4E-44 339.6 22.7 250 351-616 41-301 (307)
43 3q4u_A Activin receptor type-1 100.0 1.1E-40 3.7E-45 342.2 17.2 252 351-613 13-300 (301)
44 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.3E-40 4.6E-45 361.8 18.6 249 351-617 189-442 (452)
45 3t9t_A Tyrosine-protein kinase 100.0 3.7E-40 1.3E-44 332.1 20.3 248 351-616 13-265 (267)
46 1luf_A Muscle-specific tyrosin 100.0 1.6E-40 5.6E-45 347.5 18.4 254 351-620 52-340 (343)
47 2c30_A Serine/threonine-protei 100.0 9.7E-40 3.3E-44 339.0 24.0 241 351-609 50-295 (321)
48 4eqm_A Protein kinase; transfe 100.0 3.1E-40 1.1E-44 338.4 19.8 252 351-617 16-277 (294)
49 2yab_A Death-associated protei 100.0 6.7E-40 2.3E-44 345.4 22.6 243 350-608 16-272 (361)
50 1o6l_A RAC-beta serine/threoni 100.0 7E-40 2.4E-44 342.1 22.5 239 351-609 10-261 (337)
51 3vhe_A Vascular endothelial gr 100.0 9.6E-41 3.3E-45 351.6 15.8 251 351-616 27-356 (359)
52 3pls_A Macrophage-stimulating 100.0 5.8E-40 2E-44 336.2 21.2 258 343-617 18-289 (298)
53 1fot_A TPK1 delta, CAMP-depend 100.0 8.2E-40 2.8E-44 339.0 22.4 238 351-608 11-258 (318)
54 4euu_A Serine/threonine-protei 100.0 9.5E-40 3.2E-44 338.6 22.4 260 351-614 14-308 (319)
55 3kmu_A ILK, integrin-linked ki 100.0 6.1E-40 2.1E-44 330.9 20.2 246 351-615 15-270 (271)
56 3l9p_A Anaplastic lymphoma kin 100.0 2.5E-40 8.5E-45 350.0 18.0 250 351-616 76-346 (367)
57 3ugc_A Tyrosine-protein kinase 100.0 1.7E-40 5.8E-45 340.1 16.0 257 351-616 15-292 (295)
58 2y0a_A Death-associated protei 100.0 1.4E-39 4.9E-44 338.5 23.1 243 350-608 15-271 (326)
59 3tt0_A Basic fibroblast growth 100.0 5.9E-40 2E-44 349.1 20.5 251 350-616 73-353 (382)
60 3qd2_B Eukaryotic translation 100.0 4E-40 1.4E-44 342.5 18.7 240 351-608 11-325 (332)
61 3op5_A Serine/threonine-protei 100.0 5E-40 1.7E-44 347.3 19.5 255 351-616 40-330 (364)
62 3c1x_A Hepatocyte growth facto 100.0 4.2E-40 1.4E-44 348.7 19.0 250 350-617 93-357 (373)
63 4fvq_A Tyrosine-protein kinase 100.0 3.1E-40 1.1E-44 336.9 17.0 250 351-620 13-280 (289)
64 3niz_A Rhodanese family protei 100.0 1.1E-39 3.8E-44 337.0 21.3 250 351-608 26-300 (311)
65 1t46_A HOMO sapiens V-KIT hard 100.0 4.6E-40 1.6E-44 339.4 18.4 254 350-618 27-310 (313)
66 2ivs_A Proto-oncogene tyrosine 100.0 4.8E-40 1.6E-44 339.5 18.3 251 350-616 27-312 (314)
67 3og7_A AKAP9-BRAF fusion prote 100.0 9.8E-40 3.4E-44 333.6 19.4 249 351-615 29-288 (289)
68 3tki_A Serine/threonine-protei 100.0 5.7E-40 1.9E-44 341.1 17.8 242 351-609 12-262 (323)
69 3dtc_A Mitogen-activated prote 100.0 7.8E-40 2.7E-44 330.7 18.3 243 351-613 12-271 (271)
70 1rjb_A FL cytokine receptor; k 100.0 6.7E-40 2.3E-44 343.2 18.4 253 350-617 49-336 (344)
71 1mp8_A Focal adhesion kinase 1 100.0 5.6E-40 1.9E-44 333.9 17.1 249 350-617 19-278 (281)
72 3poz_A Epidermal growth factor 100.0 4.9E-40 1.7E-44 342.1 17.0 247 351-616 20-279 (327)
73 2izr_A Casein kinase I isoform 100.0 9.1E-40 3.1E-44 340.4 19.0 250 351-616 14-282 (330)
74 3mdy_A Bone morphogenetic prot 100.0 1.4E-39 4.6E-44 339.5 20.3 258 350-618 41-334 (337)
75 3kfa_A Tyrosine-protein kinase 100.0 1E-39 3.4E-44 332.9 18.8 250 350-616 17-272 (288)
76 2x4f_A Myosin light chain kina 100.0 1.2E-39 4.2E-44 345.3 19.9 248 351-613 94-349 (373)
77 2ozo_A Tyrosine-protein kinase 100.0 1.5E-39 5.2E-44 366.0 21.8 246 353-617 343-600 (613)
78 2w4o_A Calcium/calmodulin-depe 100.0 1.4E-39 4.7E-44 341.9 19.5 242 351-608 58-305 (349)
79 2bdw_A Hypothetical protein K1 100.0 3.6E-39 1.2E-43 340.4 22.8 244 350-609 33-285 (362)
80 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.1E-39 7.2E-44 340.4 20.6 238 351-608 46-293 (350)
81 2h8h_A Proto-oncogene tyrosine 100.0 6.6E-40 2.2E-44 363.6 17.5 249 351-617 272-525 (535)
82 1csn_A Casein kinase-1; phosph 100.0 2.3E-39 8E-44 331.7 20.3 253 351-618 15-286 (298)
83 4e5w_A Tyrosine-protein kinase 100.0 5.3E-40 1.8E-44 337.4 15.3 256 350-614 25-301 (302)
84 3f66_A Hepatocyte growth facto 100.0 2.1E-39 7.1E-44 332.4 19.7 252 349-617 28-293 (298)
85 3o0g_A Cell division protein k 100.0 1.9E-39 6.5E-44 331.9 19.2 251 351-608 7-282 (292)
86 1ob3_A PFPK5, cell division co 100.0 2.6E-39 8.8E-44 330.3 20.1 250 351-608 7-280 (288)
87 3qup_A Tyrosine-protein kinase 100.0 1.3E-39 4.4E-44 338.0 17.9 251 350-616 27-299 (323)
88 3c0i_A Peripheral plasma membr 100.0 3.5E-39 1.2E-43 339.1 21.0 245 350-608 28-286 (351)
89 2pvf_A Fibroblast growth facto 100.0 2.6E-39 8.8E-44 337.6 19.6 251 350-616 39-319 (334)
90 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.1E-39 3.8E-44 342.8 16.9 238 351-608 28-280 (353)
91 3uc3_A Serine/threonine-protei 100.0 2.9E-39 9.9E-44 341.0 20.1 242 351-609 25-275 (361)
92 3kex_A Receptor tyrosine-prote 100.0 7.6E-40 2.6E-44 340.4 15.4 247 351-616 18-277 (325)
93 2zv2_A Calcium/calmodulin-depe 100.0 4.3E-39 1.5E-43 330.3 20.7 239 351-608 18-292 (298)
94 1qpc_A LCK kinase; alpha beta 100.0 2E-39 7E-44 329.2 18.1 248 351-616 18-270 (279)
95 4dc2_A Protein kinase C IOTA t 100.0 2.2E-39 7.7E-44 344.9 19.0 234 351-603 57-307 (396)
96 3soa_A Calcium/calmodulin-depe 100.0 4.2E-39 1.4E-43 348.3 21.4 242 351-608 16-267 (444)
97 3llt_A Serine/threonine kinase 100.0 2.4E-39 8.4E-44 341.2 19.0 251 351-608 40-355 (360)
98 1u59_A Tyrosine-protein kinase 100.0 3E-39 1E-43 329.6 18.9 252 352-622 16-279 (287)
99 3lxp_A Non-receptor tyrosine-p 100.0 9.2E-40 3.1E-44 338.7 15.0 260 351-618 36-313 (318)
100 1kob_A Twitchin; kinase, intra 100.0 5E-39 1.7E-43 341.8 20.9 244 351-609 56-305 (387)
101 1xjd_A Protein kinase C, theta 100.0 1.8E-39 6.2E-44 340.0 17.1 237 351-607 22-268 (345)
102 3g2f_A Bone morphogenetic prot 100.0 1.2E-39 4E-44 340.1 15.6 256 351-620 18-323 (336)
103 1byg_A CSK, protein (C-termina 100.0 1.4E-39 4.7E-44 330.4 15.5 248 351-617 26-275 (278)
104 3brb_A Proto-oncogene tyrosine 100.0 1.1E-38 3.7E-43 329.5 22.4 251 350-616 38-309 (313)
105 3a8x_A Protein kinase C IOTA t 100.0 4.6E-39 1.6E-43 337.2 19.3 234 351-603 14-264 (345)
106 2pmi_A Negative RE, cyclin-dep 100.0 7.9E-39 2.7E-43 331.5 20.8 257 351-614 10-301 (317)
107 1u5q_A Serine/threonine protei 100.0 3.5E-39 1.2E-43 338.5 18.3 240 351-609 59-306 (348)
108 1mqb_A Ephrin type-A receptor 100.0 5.2E-39 1.8E-43 335.3 19.3 248 351-616 49-310 (333)
109 1fvr_A Tyrosine-protein kinase 100.0 6.5E-39 2.2E-43 333.5 20.0 262 339-618 20-303 (327)
110 4fr4_A YANK1, serine/threonine 100.0 5.4E-39 1.8E-43 340.7 19.7 239 351-608 20-271 (384)
111 2v62_A Serine/threonine-protei 100.0 3.1E-39 1.1E-43 338.6 17.7 255 351-615 42-328 (345)
112 2wqm_A Serine/threonine-protei 100.0 9.4E-39 3.2E-43 329.5 20.9 259 351-623 37-305 (310)
113 3gxj_A TGF-beta receptor type- 100.0 4.9E-41 1.7E-45 344.9 3.5 256 351-618 8-300 (303)
114 4eut_A Serine/threonine-protei 100.0 3.9E-39 1.3E-43 344.4 17.8 262 351-616 14-310 (396)
115 2ac3_A MAP kinase-interacting 100.0 9.9E-39 3.4E-43 330.2 20.1 243 351-608 18-295 (316)
116 3p1a_A MYT1 kinase, membrane-a 100.0 4.6E-39 1.6E-43 332.4 17.5 237 350-608 61-304 (311)
117 2xir_A Vascular endothelial gr 100.0 3.9E-39 1.3E-43 332.9 17.0 252 350-616 31-311 (316)
118 3a62_A Ribosomal protein S6 ki 100.0 1.2E-38 4.1E-43 331.7 20.8 238 351-608 22-276 (327)
119 2i0e_A Protein kinase C-beta I 100.0 4.8E-39 1.6E-43 337.8 17.9 238 351-608 25-276 (353)
120 3kn6_A Ribosomal protein S6 ki 100.0 2.5E-39 8.6E-44 336.5 15.6 241 351-608 16-270 (325)
121 3lzb_A Epidermal growth factor 100.0 5.5E-39 1.9E-43 334.2 18.1 247 351-616 20-279 (327)
122 3gni_B Strad alpha; kinase fol 100.0 8.9E-39 3E-43 340.8 20.0 256 351-613 30-340 (389)
123 3h4j_B AMPK kdaid, SNF1-like p 100.0 2E-39 6.9E-44 338.4 14.6 237 351-608 14-258 (336)
124 3dbq_A Dual specificity protei 100.0 7.9E-39 2.7E-43 335.3 18.9 240 351-609 14-274 (343)
125 3ork_A Serine/threonine protei 100.0 2.8E-39 9.5E-44 333.9 15.2 248 351-614 17-280 (311)
126 3fdn_A Serine/threonine-protei 100.0 1.7E-38 5.9E-43 322.5 20.7 239 351-609 14-258 (279)
127 2i1m_A Macrophage colony-stimu 100.0 1.3E-39 4.5E-44 339.4 12.8 253 350-617 50-328 (333)
128 1p4o_A Insulin-like growth fac 100.0 3.8E-39 1.3E-43 334.2 16.1 251 350-616 29-300 (322)
129 4fl3_A Tyrosine-protein kinase 100.0 4E-39 1.4E-43 363.6 17.5 244 352-615 375-631 (635)
130 2y94_A 5'-AMP-activated protei 100.0 2.2E-38 7.6E-43 345.0 22.7 238 351-608 21-266 (476)
131 3lxl_A Tyrosine-protein kinase 100.0 1.3E-39 4.4E-44 338.8 12.3 259 350-616 27-304 (327)
132 2zmd_A Dual specificity protei 100.0 1.5E-38 5E-43 339.1 20.5 241 350-609 60-321 (390)
133 4aw2_A Serine/threonine-protei 100.0 4.1E-39 1.4E-43 347.2 16.4 244 351-608 79-338 (437)
134 4ejn_A RAC-alpha serine/threon 100.0 7.9E-39 2.7E-43 347.4 18.6 239 351-608 153-404 (446)
135 2a2a_A Death-associated protei 100.0 2.8E-38 9.5E-43 327.9 21.9 243 350-608 16-272 (321)
136 2r5t_A Serine/threonine-protei 100.0 9.6E-39 3.3E-43 338.0 18.7 238 351-608 43-289 (373)
137 2a19_B Interferon-induced, dou 100.0 1.4E-38 4.7E-43 323.5 19.1 243 351-618 16-277 (284)
138 3ll6_A Cyclin G-associated kin 100.0 5.1E-39 1.7E-43 334.8 16.2 250 348-617 30-310 (337)
139 2jii_A Serine/threonine-protei 100.0 4.1E-39 1.4E-43 338.7 15.6 255 351-619 47-340 (352)
140 2eue_A Carbon catabolite derep 100.0 2.4E-38 8.1E-43 320.8 20.6 237 351-608 18-262 (275)
141 3bhy_A Death-associated protei 100.0 2.7E-38 9.3E-43 321.4 21.1 253 351-619 10-278 (283)
142 3g33_A Cell division protein k 100.0 1.8E-38 6.3E-43 327.1 20.1 251 351-608 14-296 (308)
143 1cm8_A Phosphorylated MAP kina 100.0 2.1E-38 7.2E-43 335.1 21.0 253 351-613 30-314 (367)
144 3is5_A Calcium-dependent prote 100.0 1.7E-38 5.9E-43 323.8 19.6 243 351-608 27-278 (285)
145 3cc6_A Protein tyrosine kinase 100.0 8.3E-39 2.8E-43 325.2 17.2 247 351-616 17-274 (281)
146 1nxk_A MAP kinase-activated pr 100.0 1.4E-38 4.8E-43 340.3 19.7 242 351-609 67-322 (400)
147 1t4h_A Serine/threonine-protei 100.0 3.7E-38 1.3E-42 321.9 21.9 240 351-608 31-282 (290)
148 3v8s_A RHO-associated protein 100.0 5E-39 1.7E-43 343.9 16.1 242 351-609 74-330 (410)
149 3f3z_A Calcium/calmodulin-depe 100.0 2.4E-38 8.4E-43 320.9 20.2 248 351-615 14-270 (277)
150 2clq_A Mitogen-activated prote 100.0 2.5E-38 8.5E-43 323.6 20.0 243 352-608 28-278 (295)
151 4agu_A Cyclin-dependent kinase 100.0 2.4E-38 8.3E-43 326.5 19.8 251 351-608 8-284 (311)
152 4hgt_A Casein kinase I isoform 100.0 1.6E-38 5.6E-43 324.9 18.3 253 351-618 14-283 (296)
153 1xbb_A Tyrosine-protein kinase 100.0 9.3E-39 3.2E-43 326.6 16.4 246 352-617 23-281 (291)
154 1b6c_B TGF-B superfamily recep 100.0 1.3E-38 4.4E-43 332.9 17.3 257 350-618 46-339 (342)
155 3cok_A Serine/threonine-protei 100.0 1.8E-38 6.2E-43 322.0 17.8 239 351-608 16-262 (278)
156 3uzp_A CKI-delta, CKID, casein 100.0 2.8E-38 9.6E-43 323.4 19.3 253 351-618 14-283 (296)
157 3dls_A PAS domain-containing s 100.0 9.7E-39 3.3E-43 333.5 16.0 233 351-609 29-275 (335)
158 2yfx_A Tyrosine-protein kinase 100.0 3.3E-38 1.1E-42 328.1 19.8 250 351-616 35-305 (327)
159 3oz6_A Mitogen-activated prote 100.0 1.7E-38 6E-43 338.4 18.1 249 351-609 14-329 (388)
160 3hko_A Calcium/calmodulin-depe 100.0 2.1E-38 7E-43 332.0 18.3 252 350-614 30-338 (345)
161 2h34_A Serine/threonine-protei 100.0 3.2E-38 1.1E-42 325.7 19.4 250 351-617 39-298 (309)
162 3kvw_A DYRK2, dual specificity 100.0 1.5E-38 5.2E-43 343.2 17.7 193 351-549 102-303 (429)
163 2w1i_A JAK2; chromosomal rearr 100.0 9E-39 3.1E-43 332.4 15.3 258 350-616 45-323 (326)
164 2yex_A Serine/threonine-protei 100.0 4.3E-38 1.5E-42 318.6 19.7 241 351-608 12-261 (276)
165 3i6u_A CDS1, serine/threonine- 100.0 2.3E-38 7.8E-43 340.9 18.7 243 350-608 139-399 (419)
166 3ttj_A Mitogen-activated prote 100.0 3.3E-38 1.1E-42 343.7 20.2 248 351-609 67-356 (464)
167 2vd5_A DMPK protein; serine/th 100.0 7.6E-39 2.6E-43 342.8 14.8 243 351-608 66-327 (412)
168 3byv_A Rhoptry kinase; malaria 100.0 1.4E-39 4.9E-44 345.5 8.6 242 351-615 78-368 (377)
169 3lm5_A Serine/threonine-protei 100.0 4.6E-38 1.6E-42 327.3 19.8 247 349-609 32-288 (327)
170 3kk8_A Calcium/calmodulin depe 100.0 5.9E-38 2E-42 319.1 19.9 242 351-608 11-261 (284)
171 4aaa_A Cyclin-dependent kinase 100.0 3.5E-38 1.2E-42 328.6 18.4 251 351-608 30-306 (331)
172 2buj_A Serine/threonine-protei 100.0 1.7E-38 5.6E-43 328.6 15.8 253 351-617 34-308 (317)
173 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.1E-38 7.1E-43 330.1 16.7 249 351-608 39-318 (329)
174 3nsz_A CK II alpha, casein kin 100.0 6E-38 2.1E-42 326.3 19.8 246 351-608 41-319 (330)
175 3c4z_A Rhodopsin kinase; Ser/T 100.0 5E-38 1.7E-42 346.3 20.0 242 351-608 190-448 (543)
176 2rku_A Serine/threonine-protei 100.0 6E-38 2.1E-42 321.0 19.0 239 351-609 20-266 (294)
177 2acx_A G protein-coupled recep 100.0 2.9E-38 9.9E-43 349.1 17.8 241 351-608 189-444 (576)
178 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.4E-38 4.8E-43 336.3 14.5 243 351-616 70-340 (365)
179 3mtl_A Cell division protein k 100.0 2.3E-38 8E-43 329.0 15.7 256 351-614 7-289 (324)
180 2qr7_A Ribosomal protein S6 ki 100.0 2.4E-38 8.3E-43 331.3 15.8 240 351-608 27-277 (342)
181 3a7i_A MST3 kinase, serine/thr 100.0 8.2E-38 2.8E-42 321.4 19.4 240 351-610 27-272 (303)
182 2fst_X Mitogen-activated prote 100.0 5.7E-38 1.9E-42 331.7 18.7 249 351-609 34-312 (367)
183 2owb_A Serine/threonine-protei 100.0 4.5E-38 1.5E-42 328.5 17.7 238 351-608 46-291 (335)
184 2vwi_A Serine/threonine-protei 100.0 2.3E-38 7.9E-43 325.0 15.2 251 351-608 20-287 (303)
185 1x8b_A WEE1HU, WEE1-like prote 100.0 1.3E-38 4.4E-43 324.0 13.2 238 351-608 16-279 (289)
186 2vgo_A Serine/threonine-protei 100.0 1.2E-37 4.1E-42 317.1 20.2 238 351-608 19-262 (284)
187 3rp9_A Mitogen-activated prote 100.0 8.4E-38 2.9E-42 340.6 20.3 183 351-541 58-280 (458)
188 3rgf_A Cyclin-dependent kinase 100.0 1.1E-37 3.9E-42 334.1 20.8 201 341-547 16-238 (405)
189 1wak_A Serine/threonine-protei 100.0 4.8E-38 1.6E-42 335.2 17.7 252 351-608 42-391 (397)
190 1z57_A Dual specificity protei 100.0 9.1E-38 3.1E-42 325.4 19.2 252 351-609 19-329 (339)
191 3nyv_A Calmodulin-domain prote 100.0 1.1E-37 3.6E-42 342.2 20.7 241 351-608 31-281 (484)
192 2jam_A Calcium/calmodulin-depe 100.0 9.5E-38 3.2E-42 321.2 19.0 242 351-608 14-261 (304)
193 3com_A Serine/threonine-protei 100.0 1.3E-37 4.6E-42 321.3 19.9 241 351-608 34-278 (314)
194 3mi9_A Cell division protein k 100.0 2.1E-37 7.2E-42 325.4 21.5 251 351-609 22-312 (351)
195 1j1b_A Glycogen synthase kinas 100.0 5.1E-38 1.7E-42 338.2 17.1 257 349-614 57-344 (420)
196 2pml_X PFPK7, Ser/Thr protein 100.0 5.2E-38 1.8E-42 329.3 16.6 253 351-608 36-322 (348)
197 3fme_A Dual specificity mitoge 100.0 5.6E-38 1.9E-42 320.2 16.4 247 351-612 12-272 (290)
198 3e3p_A Protein kinase, putativ 100.0 9E-38 3.1E-42 329.1 18.5 260 351-614 28-322 (360)
199 2y4i_B KSR2, HKSR2, kinase sup 100.0 8.6E-38 2.9E-42 323.4 18.0 249 351-619 38-306 (319)
200 3mwu_A Calmodulin-domain prote 100.0 1.6E-37 5.4E-42 341.0 21.0 242 351-609 27-277 (486)
201 2w5a_A Serine/threonine-protei 100.0 2.9E-38 9.9E-43 320.5 13.9 247 351-613 11-272 (279)
202 3an0_A Dual specificity mitoge 100.0 1.1E-37 3.6E-42 326.1 18.6 244 351-608 56-310 (340)
203 2y7j_A Phosphorylase B kinase 100.0 1.5E-37 5.2E-42 328.3 20.0 243 350-608 98-359 (365)
204 1ua2_A CAK, cell division prot 100.0 1.3E-37 4.6E-42 326.3 19.3 251 351-609 15-292 (346)
205 3q60_A ROP5B; pseudokinase, tr 100.0 4.5E-39 1.6E-43 340.8 8.2 254 351-616 67-362 (371)
206 2j7t_A Serine/threonine-protei 100.0 6.9E-38 2.4E-42 321.5 16.7 242 351-608 24-275 (302)
207 2r3i_A Cell division protein k 100.0 2E-37 6.9E-42 317.6 20.1 251 351-608 8-283 (299)
208 2ycf_A Serine/threonine-protei 100.0 9.9E-38 3.4E-42 323.8 18.0 242 351-608 15-274 (322)
209 4exu_A Mitogen-activated prote 100.0 2.1E-37 7.2E-42 328.1 20.7 248 351-609 47-324 (371)
210 3lij_A Calcium/calmodulin depe 100.0 2.1E-37 7E-42 340.7 21.3 241 351-608 42-291 (494)
211 3q5i_A Protein kinase; CDPK, m 100.0 1.9E-37 6.6E-42 341.7 21.1 241 351-608 41-301 (504)
212 2vx3_A Dual specificity tyrosi 100.0 1.4E-37 4.8E-42 330.8 19.2 195 351-549 59-262 (382)
213 3pg1_A Mitogen-activated prote 100.0 1.9E-37 6.6E-42 327.0 20.0 250 351-608 27-316 (362)
214 2xrw_A Mitogen-activated prote 100.0 2.6E-37 8.8E-42 327.4 20.9 247 351-608 30-318 (371)
215 1u46_A ACK-1, activated CDC42 100.0 4.6E-38 1.6E-42 320.9 14.6 249 351-617 23-286 (291)
216 1vzo_A Ribosomal protein S6 ki 100.0 4.1E-38 1.4E-42 331.5 14.6 241 351-610 59-323 (355)
217 1zy4_A Serine/threonine-protei 100.0 9.1E-38 3.1E-42 320.2 16.7 242 351-609 11-284 (303)
218 3sv0_A Casein kinase I-like; t 100.0 2.1E-37 7E-42 338.0 20.4 251 351-616 12-279 (483)
219 3eqc_A Dual specificity mitoge 100.0 6.9E-38 2.4E-42 330.2 16.0 251 351-608 38-324 (360)
220 2x7f_A TRAF2 and NCK-interacti 100.0 1.2E-37 4E-42 323.6 17.5 242 351-608 29-286 (326)
221 4e7w_A Glycogen synthase kinas 100.0 6.6E-38 2.3E-42 334.5 16.0 257 350-614 44-329 (394)
222 3pfq_A PKC-B, PKC-beta, protei 100.0 1.4E-37 4.7E-42 353.4 19.5 238 351-608 346-597 (674)
223 2j0j_A Focal adhesion kinase 1 100.0 1.5E-37 5.1E-42 352.0 19.7 249 350-617 394-653 (656)
224 2h6d_A 5'-AMP-activated protei 100.0 2.4E-37 8.2E-42 313.3 19.2 239 351-609 16-262 (276)
225 3n9x_A Phosphotransferase; mal 100.0 4.2E-37 1.4E-41 332.4 21.9 186 351-544 31-251 (432)
226 3eb0_A Putative uncharacterize 100.0 1.2E-37 4.1E-42 331.4 17.2 250 351-608 12-321 (383)
227 3coi_A Mitogen-activated prote 100.0 4.3E-37 1.5E-41 323.3 18.9 247 351-608 29-305 (353)
228 2eu9_A Dual specificity protei 100.0 5.1E-37 1.7E-41 322.1 19.1 259 351-615 24-342 (355)
229 2wtk_C Serine/threonine-protei 100.0 6.1E-37 2.1E-41 315.0 19.0 240 351-609 10-264 (305)
230 1q8y_A SR protein kinase; tran 100.0 3.4E-37 1.2E-41 326.1 17.5 252 351-608 24-333 (373)
231 2i6l_A Mitogen-activated prote 100.0 5.4E-37 1.9E-41 317.1 18.5 248 351-608 16-305 (320)
232 1phk_A Phosphorylase kinase; g 100.0 8E-37 2.7E-41 313.0 18.4 242 351-608 22-283 (298)
233 3qyz_A Mitogen-activated prote 100.0 7.3E-37 2.5E-41 323.0 18.6 248 351-608 32-313 (364)
234 2wei_A Calmodulin-domain prote 100.0 2E-36 6.9E-41 308.6 20.2 241 351-608 27-276 (287)
235 3cek_A Dual specificity protei 100.0 1.1E-36 3.8E-41 314.5 18.5 240 351-609 33-293 (313)
236 3fhr_A MAP kinase-activated pr 100.0 7.2E-37 2.5E-41 319.5 16.6 243 350-608 33-287 (336)
237 2rio_A Serine/threonine-protei 100.0 1.1E-36 3.7E-41 329.3 17.7 243 351-608 20-295 (434)
238 1blx_A Cyclin-dependent kinase 100.0 1.3E-36 4.4E-41 315.6 17.6 251 351-608 16-296 (326)
239 3p23_A Serine/threonine-protei 100.0 1.7E-36 5.9E-41 327.1 18.1 241 349-608 27-283 (432)
240 3aln_A Dual specificity mitoge 100.0 4.1E-37 1.4E-41 319.9 12.5 246 351-608 27-285 (327)
241 2b9h_A MAP kinase FUS3, mitoge 100.0 2.5E-36 8.6E-41 317.1 18.5 253 351-613 16-312 (353)
242 3uqc_A Probable conserved tran 100.0 1.2E-36 4E-41 310.5 14.8 227 351-617 36-267 (286)
243 2dyl_A Dual specificity mitoge 100.0 4E-36 1.4E-40 310.6 17.4 243 351-608 30-283 (318)
244 3a99_A Proto-oncogene serine/t 100.0 7.6E-37 2.6E-41 317.0 9.6 232 351-608 48-293 (320)
245 3m2w_A MAP kinase-activated pr 100.0 1E-35 3.6E-40 305.3 17.3 225 351-608 23-256 (299)
246 3qa8_A MGC80376 protein; kinas 100.0 1.9E-36 6.4E-41 338.0 10.8 261 351-615 19-309 (676)
247 2iwi_A Serine/threonine-protei 100.0 2.3E-36 7.7E-41 312.0 10.4 232 351-608 36-283 (312)
248 2pzi_A Probable serine/threoni 100.0 2.7E-35 9.2E-40 336.2 16.1 233 351-614 85-327 (681)
249 3dzo_A Rhoptry kinase domain; 100.0 1.4E-35 5E-40 318.4 10.3 235 351-608 83-363 (413)
250 2vuw_A Serine/threonine-protei 100.0 5.5E-34 1.9E-38 297.5 10.3 236 351-607 25-329 (336)
251 4azs_A Methyltransferase WBDD; 99.9 2.8E-28 9.4E-33 271.2 7.8 181 352-543 240-436 (569)
252 1ogq_A PGIP-2, polygalacturona 99.9 1.1E-26 3.7E-31 239.9 15.5 185 24-213 3-196 (313)
253 3en9_A Glycoprotease, O-sialog 99.9 1.1E-25 3.7E-30 248.9 9.5 178 350-545 340-538 (540)
254 3rgz_A Protein brassinosteroid 99.9 4.8E-24 1.6E-28 246.6 13.2 183 19-209 4-218 (768)
255 3rgz_A Protein brassinosteroid 99.9 5.2E-23 1.8E-27 238.0 11.9 163 73-237 514-751 (768)
256 4eco_A Uncharacterized protein 99.9 8.6E-23 2.9E-27 231.0 12.5 182 27-214 30-329 (636)
257 4ecn_A Leucine-rich repeat pro 99.9 5.9E-23 2E-27 237.5 10.8 177 25-214 267-572 (876)
258 1zar_A RIO2 kinase; serine kin 99.9 3.4E-22 1.2E-26 202.8 10.0 128 351-497 95-241 (282)
259 4fcg_A Uncharacterized protein 99.8 9.3E-21 3.2E-25 196.6 6.9 179 25-213 25-227 (328)
260 1ogq_A PGIP-2, polygalacturona 99.8 3.2E-20 1.1E-24 191.2 8.7 160 73-234 125-312 (313)
261 1zth_A RIO1 serine protein kin 99.8 4.7E-19 1.6E-23 177.3 9.3 136 350-498 51-219 (258)
262 2v70_A SLIT-2, SLIT homolog 2 99.8 2.3E-18 8E-23 167.9 12.7 152 57-208 7-170 (220)
263 3e6j_A Variable lymphocyte rec 99.8 4.9E-18 1.7E-22 166.7 14.1 137 52-207 12-151 (229)
264 3m19_A Variable lymphocyte rec 99.8 1E-17 3.5E-22 166.7 15.7 153 73-226 35-193 (251)
265 2o6s_A Variable lymphocyte rec 99.7 9.8E-18 3.4E-22 161.8 14.5 151 58-209 4-166 (208)
266 1w8a_A SLIT protein; signaling 99.7 9.4E-18 3.2E-22 160.0 9.1 149 77-229 12-166 (192)
267 2v9t_B SLIT homolog 2 protein 99.7 4.1E-17 1.4E-21 159.1 13.2 129 98-226 32-166 (220)
268 4fcg_A Uncharacterized protein 99.7 3.4E-17 1.2E-21 169.7 11.9 148 73-223 127-288 (328)
269 3rfs_A Internalin B, repeat mo 99.7 4.6E-16 1.6E-20 156.7 15.8 151 73-226 63-219 (272)
270 1w8a_A SLIT protein; signaling 99.7 4.4E-16 1.5E-20 148.3 12.9 171 58-228 5-186 (192)
271 2xot_A Amphoterin-induced prot 99.7 1.4E-16 4.8E-21 167.4 10.1 169 58-227 15-204 (361)
272 3m19_A Variable lymphocyte rec 99.6 1E-15 3.5E-20 152.2 14.2 135 73-208 59-196 (251)
273 3rfs_A Internalin B, repeat mo 99.6 9.9E-16 3.4E-20 154.3 14.2 137 72-209 84-223 (272)
274 2v70_A SLIT-2, SLIT homolog 2 99.6 1.1E-15 3.9E-20 148.8 14.0 158 57-226 3-167 (220)
275 4gyi_A RIO2 kinase; protein ki 99.6 5.1E-17 1.7E-21 169.5 4.6 137 349-500 98-267 (397)
276 2o6s_A Variable lymphocyte rec 99.6 2.7E-16 9.2E-21 151.7 9.2 138 73-216 52-190 (208)
277 2o6q_A Variable lymphocyte rec 99.6 1.6E-15 5.4E-20 152.6 15.2 137 74-211 38-177 (270)
278 2z81_A CD282 antigen, TOLL-lik 99.6 3.1E-16 1E-20 174.0 10.9 153 58-214 3-171 (549)
279 2o6q_A Variable lymphocyte rec 99.6 2.5E-15 8.6E-20 151.1 15.9 154 73-227 61-220 (270)
280 4g8a_A TOLL-like receptor 4; l 99.6 6.6E-16 2.3E-20 173.9 12.4 147 65-212 35-194 (635)
281 2v9t_B SLIT homolog 2 protein 99.6 2.4E-15 8.2E-20 146.5 14.7 149 57-206 7-167 (220)
282 3v47_A TOLL-like receptor 5B a 99.6 6.4E-16 2.2E-20 167.3 11.8 149 65-214 14-177 (455)
283 1p9a_G Platelet glycoprotein I 99.6 2.9E-15 9.9E-20 152.4 15.2 129 74-206 32-163 (290)
284 2z62_A TOLL-like receptor 4, v 99.6 1.1E-15 3.7E-20 154.2 11.8 138 73-211 28-169 (276)
285 2z66_A Variable lymphocyte rec 99.6 1E-15 3.4E-20 156.8 11.6 134 73-208 78-216 (306)
286 1ozn_A Reticulon 4 receptor; N 99.6 1.3E-15 4.5E-20 154.3 12.1 141 73-214 56-200 (285)
287 2z80_A TOLL-like receptor 2, v 99.6 1.1E-15 3.6E-20 160.0 11.4 158 52-213 23-196 (353)
288 3e6j_A Variable lymphocyte rec 99.6 5.8E-15 2E-19 144.7 15.7 135 73-208 40-176 (229)
289 4b8c_D Glucose-repressible alc 99.6 2.8E-16 9.6E-21 179.8 6.6 179 25-212 130-337 (727)
290 2o6r_A Variable lymphocyte rec 99.6 3.4E-15 1.2E-19 140.0 12.7 112 97-208 27-141 (177)
291 3vq2_A TLR4, TOLL-like recepto 99.6 2.3E-15 7.7E-20 169.1 13.3 140 73-213 32-175 (606)
292 3zyi_A Leucine-rich repeat-con 99.6 2.4E-15 8.1E-20 162.9 12.8 146 59-205 52-210 (452)
293 4eco_A Uncharacterized protein 99.6 4.5E-16 1.5E-20 175.9 7.4 139 73-214 206-375 (636)
294 3vq2_A TLR4, TOLL-like recepto 99.6 1.4E-15 4.7E-20 170.9 11.2 135 74-210 377-516 (606)
295 3cvr_A Invasion plasmid antige 99.6 1.3E-15 4.5E-20 168.5 10.1 139 51-209 35-177 (571)
296 4glp_A Monocyte differentiatio 99.6 1.7E-15 5.7E-20 155.6 10.2 146 74-222 146-304 (310)
297 2id5_A Lingo-1, leucine rich r 99.6 1.8E-15 6.2E-20 164.9 11.0 150 59-209 9-170 (477)
298 3v47_A TOLL-like receptor 5B a 99.6 3.8E-15 1.3E-19 161.2 13.4 134 74-208 276-412 (455)
299 1ozn_A Reticulon 4 receptor; N 99.6 5.7E-15 1.9E-19 149.6 13.6 139 73-212 32-174 (285)
300 3oja_A Leucine-rich immune mol 99.6 1.2E-15 4E-20 166.8 8.9 113 97-211 119-233 (487)
301 2ell_A Acidic leucine-rich nuc 99.6 2.9E-15 9.9E-20 139.2 10.3 129 73-204 24-160 (168)
302 3j0a_A TOLL-like receptor 5; m 99.6 9.9E-16 3.4E-20 178.8 7.9 134 94-227 422-562 (844)
303 4ecn_A Leucine-rich repeat pro 99.6 2.1E-15 7.3E-20 174.4 10.0 147 73-223 448-630 (876)
304 4ezg_A Putative uncharacterize 99.6 5.4E-15 1.8E-19 141.3 10.8 126 75-205 46-173 (197)
305 2z62_A TOLL-like receptor 4, v 99.6 1.1E-14 3.9E-19 146.6 13.5 112 73-185 52-165 (276)
306 2je0_A Acidic leucine-rich nuc 99.6 2.6E-15 9E-20 136.6 7.8 125 73-200 17-149 (149)
307 3oja_B Anopheles plasmodium-re 99.6 4.2E-15 1.4E-19 166.8 10.9 172 49-221 9-201 (597)
308 1wwl_A Monocyte differentiatio 99.6 7.5E-15 2.6E-19 150.9 11.1 147 73-222 121-284 (312)
309 3zyj_A Leucine-rich repeat-con 99.6 1.9E-14 6.3E-19 155.3 14.1 148 59-208 41-201 (440)
310 3t6q_A CD180 antigen; protein- 99.6 4.8E-15 1.6E-19 166.5 9.5 150 63-213 14-175 (606)
311 1p9a_G Platelet glycoprotein I 99.5 2.4E-14 8.1E-19 145.6 13.5 150 73-227 55-210 (290)
312 2z66_A Variable lymphocyte rec 99.5 1.3E-14 4.3E-19 148.6 11.4 154 73-226 101-262 (306)
313 3j0a_A TOLL-like receptor 5; m 99.5 1E-14 3.4E-19 170.3 11.1 147 62-211 15-168 (844)
314 2xwt_C Thyrotropin receptor; s 99.5 1.4E-14 4.9E-19 142.7 10.6 135 73-210 31-174 (239)
315 2wfh_A SLIT homolog 2 protein 99.5 4.2E-14 1.4E-18 134.7 13.4 124 77-205 14-140 (193)
316 1wwl_A Monocyte differentiatio 99.5 3.7E-15 1.3E-19 153.2 6.5 136 73-209 95-246 (312)
317 3t6q_A CD180 antigen; protein- 99.5 1.3E-14 4.6E-19 162.8 11.7 142 73-215 376-524 (606)
318 4ezg_A Putative uncharacterize 99.5 1.4E-14 4.8E-19 138.4 9.8 130 73-205 66-195 (197)
319 3o6n_A APL1; leucine-rich repe 99.5 1.3E-14 4.6E-19 153.7 10.4 134 73-207 45-181 (390)
320 1ziw_A TOLL-like receptor 3; i 99.5 1.8E-14 6.1E-19 164.1 11.7 136 73-209 25-163 (680)
321 2z7x_B TOLL-like receptor 1, v 99.5 2.1E-14 7.1E-19 158.2 10.9 135 74-212 303-441 (520)
322 2z63_A TOLL-like receptor 4, v 99.5 2.4E-14 8.4E-19 159.3 11.5 153 73-227 373-533 (570)
323 2wfh_A SLIT homolog 2 protein 99.5 4E-14 1.4E-18 134.8 11.0 125 58-184 7-141 (193)
324 3oja_A Leucine-rich immune mol 99.5 7.8E-15 2.7E-19 160.3 6.9 146 62-212 110-259 (487)
325 3a79_B TLR6, VLRB.59, TOLL-lik 99.5 5E-14 1.7E-18 156.8 12.5 134 74-211 332-469 (562)
326 3a79_B TLR6, VLRB.59, TOLL-lik 99.5 6.3E-14 2.1E-18 156.0 12.9 93 119-211 350-448 (562)
327 2ft3_A Biglycan; proteoglycan, 99.5 1.2E-13 4.2E-18 143.0 14.0 144 62-210 34-190 (332)
328 1xku_A Decorin; proteoglycan, 99.5 1.1E-13 3.7E-18 143.2 13.5 147 58-209 28-188 (330)
329 4b8c_D Glucose-repressible alc 99.5 4E-15 1.4E-19 170.2 2.8 138 72-214 223-364 (727)
330 3zyi_A Leucine-rich repeat-con 99.5 1.1E-13 3.6E-18 149.9 13.9 138 73-212 99-263 (452)
331 4g8a_A TOLL-like receptor 4; l 99.5 6.9E-14 2.4E-18 157.3 12.6 155 73-227 420-582 (635)
332 2z7x_B TOLL-like receptor 1, v 99.5 3.6E-14 1.2E-18 156.3 10.0 135 74-211 248-419 (520)
333 1dce_A Protein (RAB geranylger 99.5 5E-14 1.7E-18 156.3 11.2 105 100-208 443-550 (567)
334 2z63_A TOLL-like receptor 4, v 99.5 6.3E-14 2.1E-18 156.0 12.0 149 73-222 347-504 (570)
335 4glp_A Monocyte differentiatio 99.5 1.8E-14 6.2E-19 147.8 6.5 138 74-213 92-246 (310)
336 3zyj_A Leucine-rich repeat-con 99.5 1.7E-13 5.8E-18 147.7 13.1 138 73-212 88-228 (440)
337 3oja_B Anopheles plasmodium-re 99.5 1.4E-13 4.7E-18 154.4 12.8 131 73-205 75-206 (597)
338 3o53_A Protein LRIM1, AGAP0063 99.5 9.5E-14 3.3E-18 142.9 9.8 112 97-210 119-232 (317)
339 2o6r_A Variable lymphocyte rec 99.5 1.4E-13 4.8E-18 128.9 9.9 130 57-187 3-142 (177)
340 2id5_A Lingo-1, leucine rich r 99.5 1.2E-13 4.1E-18 150.5 10.9 140 73-213 56-198 (477)
341 2z81_A CD282 antigen, TOLL-lik 99.5 1.1E-13 3.6E-18 153.5 10.5 130 74-209 335-468 (549)
342 1xku_A Decorin; proteoglycan, 99.5 3.4E-13 1.2E-17 139.5 13.3 134 73-211 121-259 (330)
343 1h6t_A Internalin B; cell adhe 99.5 2.4E-13 8E-18 138.3 11.7 125 73-205 68-192 (291)
344 2xot_A Amphoterin-induced prot 99.4 4.4E-13 1.5E-17 140.6 13.4 140 56-207 9-152 (361)
345 2je0_A Acidic leucine-rich nuc 99.4 6.7E-14 2.3E-18 127.1 6.1 111 96-208 15-130 (149)
346 1ziw_A TOLL-like receptor 3; i 99.4 1.7E-13 5.7E-18 156.1 10.7 139 73-212 49-192 (680)
347 2xwt_C Thyrotropin receptor; s 99.4 3.3E-13 1.1E-17 132.9 11.1 137 73-213 55-202 (239)
348 3cvr_A Invasion plasmid antige 99.4 4.4E-13 1.5E-17 148.3 13.1 118 73-209 80-197 (571)
349 1dce_A Protein (RAB geranylger 99.4 2.4E-13 8.4E-18 150.8 10.6 117 75-197 443-566 (567)
350 2ell_A Acidic leucine-rich nuc 99.4 2.3E-13 8E-18 126.2 8.8 112 95-208 21-137 (168)
351 3o6n_A APL1; leucine-rich repe 99.4 5.4E-13 1.9E-17 141.3 12.8 130 73-205 69-200 (390)
352 3bz5_A Internalin-J, INLJ; leu 99.4 2.8E-13 9.6E-18 146.7 10.6 100 73-183 148-247 (457)
353 3g39_A Variable lymphocyte rec 99.4 6.2E-13 2.1E-17 123.8 11.4 106 77-186 13-119 (170)
354 1h6u_A Internalin H; cell adhe 99.4 4.9E-13 1.7E-17 137.0 11.3 128 73-208 63-190 (308)
355 3g39_A Variable lymphocyte rec 99.4 8.2E-13 2.8E-17 123.0 11.6 106 100-208 11-119 (170)
356 1xeu_A Internalin C; cellular 99.4 5.8E-13 2E-17 133.3 11.0 125 73-206 41-165 (263)
357 1m9s_A Internalin B; cell inva 99.4 5E-13 1.7E-17 149.3 11.6 126 73-206 65-190 (605)
358 1a9n_A U2A', U2A'; complex (nu 99.4 3.2E-13 1.1E-17 126.5 8.5 126 73-204 19-153 (176)
359 2r9u_A Variable lymphocyte rec 99.4 1E-12 3.5E-17 122.9 11.4 106 76-185 15-121 (174)
360 2ft3_A Biglycan; proteoglycan, 99.4 1.1E-12 3.7E-17 135.9 12.4 135 73-213 78-215 (332)
361 1h6u_A Internalin H; cell adhe 99.4 8.3E-13 2.9E-17 135.3 11.4 124 74-205 42-165 (308)
362 1o6v_A Internalin A; bacterial 99.4 5.8E-13 2E-17 144.6 10.6 128 73-208 243-370 (466)
363 2r9u_A Variable lymphocyte rec 99.4 1.4E-12 4.9E-17 121.8 11.5 104 100-206 14-120 (174)
364 1xeu_A Internalin C; cellular 99.4 8.6E-13 2.9E-17 132.0 10.7 125 73-206 63-187 (263)
365 1h6t_A Internalin B; cell adhe 99.4 9.1E-13 3.1E-17 133.9 10.8 127 73-208 46-173 (291)
366 2z80_A TOLL-like receptor 2, v 99.4 4.7E-13 1.6E-17 139.8 8.2 133 73-208 76-214 (353)
367 1ds9_A Outer arm dynein; leuci 99.4 1.4E-15 4.8E-20 145.5 -10.2 132 74-209 19-158 (198)
368 1jl5_A Outer protein YOPM; leu 99.4 2.9E-12 1E-16 138.5 13.9 135 74-222 132-267 (454)
369 3o53_A Protein LRIM1, AGAP0063 99.4 8.3E-13 2.8E-17 135.9 9.0 136 73-212 120-259 (317)
370 3bz5_A Internalin-J, INLJ; leu 99.4 3.5E-12 1.2E-16 138.1 14.1 123 73-208 106-228 (457)
371 1m9s_A Internalin B; cell inva 99.4 1.9E-12 6.4E-17 144.6 12.1 127 73-208 87-214 (605)
372 1o6v_A Internalin A; bacterial 99.4 1.7E-12 5.9E-17 140.9 11.0 126 73-206 221-346 (466)
373 4fmz_A Internalin; leucine ric 99.3 2.2E-12 7.6E-17 134.2 10.7 128 73-209 177-305 (347)
374 4fmz_A Internalin; leucine ric 99.3 2.1E-12 7E-17 134.4 9.2 143 73-223 199-344 (347)
375 1jl5_A Outer protein YOPM; leu 99.3 8.1E-12 2.8E-16 135.0 13.6 121 74-209 112-232 (454)
376 2ifg_A High affinity nerve gro 99.3 7.1E-12 2.4E-16 130.5 10.7 101 81-184 16-118 (347)
377 3g06_A SSPH2 (leucine-rich rep 99.3 2.7E-12 9.2E-17 143.6 7.9 142 51-214 14-163 (622)
378 2ca6_A RAN GTPase-activating p 99.3 5.9E-13 2E-17 140.9 0.2 150 73-222 122-313 (386)
379 4ay9_X Follicle-stimulating ho 99.2 1.4E-11 4.7E-16 128.6 10.5 146 59-205 7-168 (350)
380 2ast_B S-phase kinase-associat 99.2 4E-13 1.4E-17 139.1 -1.5 126 74-201 71-205 (336)
381 3g06_A SSPH2 (leucine-rich rep 99.2 2.6E-11 8.8E-16 135.7 12.4 137 74-222 102-271 (622)
382 2ifg_A High affinity nerve gro 99.2 1.9E-11 6.4E-16 127.3 10.3 103 102-206 12-118 (347)
383 1a9n_A U2A', U2A'; complex (nu 99.2 1.4E-11 4.9E-16 115.1 8.0 111 93-209 14-130 (176)
384 1ds9_A Outer arm dynein; leuci 99.2 2E-13 6.8E-18 130.4 -6.5 124 73-204 48-185 (198)
385 2ast_B S-phase kinase-associat 99.2 2.3E-12 8E-17 133.3 0.4 138 73-211 93-243 (336)
386 2ca6_A RAN GTPase-activating p 99.2 2.5E-12 8.6E-17 136.0 -0.7 110 95-204 91-229 (386)
387 3tm0_A Aminoglycoside 3'-phosp 99.1 8.1E-11 2.8E-15 117.3 9.6 136 352-496 20-212 (263)
388 3goz_A Leucine-rich repeat-con 99.1 1.8E-11 6.3E-16 128.2 4.6 135 74-208 23-184 (362)
389 3goz_A Leucine-rich repeat-con 99.1 1E-11 3.5E-16 130.2 1.7 127 78-205 3-152 (362)
390 4ay9_X Follicle-stimulating ho 99.1 3.4E-10 1.2E-14 117.9 12.7 142 73-214 54-225 (350)
391 1nd4_A Aminoglycoside 3'-phosp 99.1 2.8E-10 9.5E-15 112.9 9.4 129 355-496 29-213 (264)
392 3dxp_A Putative acyl-COA dehyd 99.0 1.3E-09 4.5E-14 113.8 10.5 140 352-497 44-248 (359)
393 3rw6_A Nuclear RNA export fact 99.0 2.2E-11 7.7E-16 120.9 -3.6 127 57-186 76-237 (267)
394 1z7x_W Ribonuclease inhibitor; 98.9 4E-11 1.4E-15 129.6 -3.1 138 73-210 227-393 (461)
395 1z7x_W Ribonuclease inhibitor; 98.9 2.7E-10 9.1E-15 123.1 -0.0 134 73-206 3-157 (461)
396 3un9_A NLR family member X1; l 98.8 2.5E-10 8.4E-15 120.0 -0.9 133 73-205 101-253 (372)
397 3sg8_A APH(2'')-ID; antibiotic 98.7 1.1E-08 3.7E-13 104.3 5.5 184 352-545 26-287 (304)
398 3ogk_B Coronatine-insensitive 98.6 3.5E-09 1.2E-13 118.1 -1.4 87 118-204 432-526 (592)
399 3un9_A NLR family member X1; l 98.5 3E-09 1E-13 111.6 -3.7 133 73-205 72-225 (372)
400 3rw6_A Nuclear RNA export fact 98.5 1E-07 3.5E-12 94.5 5.1 78 96-175 168-257 (267)
401 3ogk_B Coronatine-insensitive 98.4 1.2E-07 4.2E-12 105.5 3.4 135 74-210 139-288 (592)
402 3r70_A Aminoglycoside phosphot 98.3 9.6E-07 3.3E-11 90.5 8.4 133 351-497 42-237 (320)
403 1io0_A Tropomodulin; LRR prote 98.3 1.9E-07 6.3E-12 87.8 1.8 110 94-203 32-163 (185)
404 3sb4_A Hypothetical leucine ri 98.3 3.2E-06 1.1E-10 86.8 10.9 37 73-111 101-137 (329)
405 3d1u_A Putative fructosamine-3 98.3 3E-06 1E-10 85.4 10.3 73 352-428 21-97 (288)
406 2p1m_B Transport inhibitor res 98.2 6.4E-08 2.2E-12 107.8 -3.5 132 73-205 338-495 (594)
407 3tdw_A Gentamicin resistance p 98.2 4.6E-06 1.6E-10 84.8 9.7 136 352-497 25-224 (306)
408 1io0_A Tropomodulin; LRR prote 98.0 6.2E-07 2.1E-11 84.1 -0.1 110 73-182 36-164 (185)
409 3ovc_A Hygromycin-B 4-O-kinase 98.0 1.2E-05 4.1E-10 83.8 8.6 73 352-429 47-122 (362)
410 2p1m_B Transport inhibitor res 98.0 2.1E-06 7.1E-11 95.5 2.7 104 96-201 103-221 (594)
411 4gkh_A Aminoglycoside 3'-phosp 98.0 1.9E-05 6.4E-10 78.4 9.3 136 352-496 30-222 (272)
412 2q83_A YTAA protein; 2635576, 97.9 6.1E-05 2.1E-09 77.3 12.0 141 352-496 38-251 (346)
413 3ats_A Putative uncharacterize 97.9 1.3E-05 4.6E-10 83.1 6.9 79 352-430 26-122 (357)
414 2ra8_A Uncharacterized protein 97.9 5.2E-06 1.8E-10 86.4 3.4 109 94-205 168-293 (362)
415 2ra8_A Uncharacterized protein 97.8 1.3E-05 4.4E-10 83.4 5.7 127 73-204 172-320 (362)
416 3sb4_A Hypothetical leucine ri 97.8 3.1E-05 1.1E-09 79.4 7.8 98 97-197 225-327 (329)
417 2olc_A MTR kinase, methylthior 97.7 0.00016 5.6E-09 76.0 11.0 73 352-426 36-120 (397)
418 3f7w_A Putative fructosamine-3 97.5 0.0004 1.4E-08 69.6 10.8 73 352-428 21-97 (288)
419 3jr1_A Putative fructosamine-3 97.5 0.00034 1.2E-08 70.9 9.9 138 352-493 42-232 (312)
420 2pyw_A Uncharacterized protein 97.2 0.0011 3.6E-08 70.4 10.3 31 466-497 231-261 (420)
421 1zyl_A Hypothetical protein YI 97.1 0.0023 7.8E-08 65.1 11.3 142 353-497 33-223 (328)
422 4fdw_A Leucine rich hypothetic 97.0 0.0029 1E-07 66.5 11.7 121 74-201 204-333 (401)
423 4fdw_A Leucine rich hypothetic 97.0 0.0025 8.6E-08 67.0 10.6 123 74-204 158-284 (401)
424 2ppq_A HSK, HK, homoserine kin 96.9 0.0019 6.5E-08 65.5 8.2 143 352-496 28-216 (322)
425 3dxq_A Choline/ethanolamine ki 96.8 0.0018 6.2E-08 65.2 7.6 70 352-428 24-95 (301)
426 3e4g_A ATP synthase subunit S, 96.8 0.00069 2.4E-08 62.2 3.5 82 74-156 62-149 (176)
427 3rfe_A Platelet glycoprotein I 96.8 0.0019 6.7E-08 56.3 6.2 36 123-158 32-67 (130)
428 3feg_A Choline/ethanolamine ki 96.5 0.0085 2.9E-07 62.3 10.2 141 352-496 56-253 (379)
429 3csv_A Aminoglycoside phosphot 96.5 0.0086 2.9E-07 61.0 10.1 142 352-497 24-217 (333)
430 3e4g_A ATP synthase subunit S, 96.5 0.0014 4.7E-08 60.3 3.5 83 98-180 61-150 (176)
431 3c5i_A Choline kinase; choline 96.4 0.0029 1E-07 65.6 5.5 72 352-427 39-120 (369)
432 3rfe_A Platelet glycoprotein I 96.3 0.0044 1.5E-07 53.9 5.5 56 125-182 11-68 (130)
433 1pgv_A TMD-1, tropomodulin TMD 96.3 0.0014 4.8E-08 61.3 2.2 85 95-179 38-136 (197)
434 1nw1_A Choline kinase (49.2 KD 95.8 0.03 1E-06 59.2 10.2 71 352-427 79-158 (429)
435 3i1a_A Spectinomycin phosphotr 95.5 0.077 2.6E-06 54.1 11.7 32 466-497 205-236 (339)
436 2qg7_A Ethanolamine kinase PV0 95.5 0.054 1.8E-06 57.7 10.8 73 352-428 114-188 (458)
437 1pgv_A TMD-1, tropomodulin TMD 95.0 0.0064 2.2E-07 56.8 1.2 84 73-156 41-136 (197)
438 2yle_A Protein spire homolog 1 94.7 0.25 8.5E-06 46.5 11.4 104 427-546 34-137 (229)
439 4gt6_A Cell surface protein; l 94.2 0.12 4.1E-06 53.7 9.1 104 93-202 260-368 (394)
440 3mes_A Choline kinase; malaria 94.1 0.097 3.3E-06 55.1 8.1 140 352-496 76-290 (424)
441 4h09_A Hypothetical leucine ri 93.0 0.37 1.3E-05 49.6 10.2 84 96-182 215-299 (379)
442 4fs7_A Uncharacterized protein 92.2 0.26 8.7E-06 51.2 7.6 118 75-201 255-376 (394)
443 3f2s_A CK, chetk-alpha, cholin 91.6 0.69 2.3E-05 48.1 10.0 29 467-495 244-278 (401)
444 4gt6_A Cell surface protein; l 91.3 0.81 2.8E-05 47.3 10.3 82 115-200 258-343 (394)
445 4h09_A Hypothetical leucine ri 90.5 0.58 2E-05 48.0 8.3 132 75-222 219-355 (379)
446 4fs7_A Uncharacterized protein 89.7 1.2 4.2E-05 45.9 10.0 119 74-201 231-353 (394)
447 3cxl_A N-chimerin; SH2, RHO-GA 80.7 0.28 9.7E-06 52.2 -0.4 58 352-412 148-215 (463)
448 4ano_A ESSB; membrane protein, 71.9 6.7 0.00023 36.8 6.4 83 399-495 48-131 (219)
449 4ann_A ESSB; membrane protein, 68.2 5.8 0.0002 37.1 5.1 115 399-546 43-158 (215)
450 3g15_A CK, chetk-alpha, cholin 50.6 6.2 0.00021 40.8 2.2 28 469-496 246-279 (401)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.7e-53 Score=435.77 Aligned_cols=259 Identities=18% Similarity=0.306 Sum_probs=209.8
Q ss_pred ccchhhhhcccccccccCCCcceEEEEeC------CCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEe
Q 006903 340 KLKFEDLLRAPAELLGRGKHGSLYRVVLD------DGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCS 412 (626)
Q Consensus 340 ~~~~~~l~~~~~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~ 412 (626)
.++.+++. ..+.||+|+||+||+|++. +++.||||+++... ...++|.+|+++|++++|||||+++|+|.+
T Consensus 9 ~I~r~~~~--l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~ 86 (299)
T 4asz_A 9 HIKRHNIV--LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVE 86 (299)
T ss_dssp BCCGGGEE--EEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred ccCHHHeE--EeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEee
Confidence 34445543 3478999999999999853 47899999998654 234679999999999999999999999999
Q ss_pred CCeEEEEEeecCCCChhHhhcCCC----------CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeC
Q 006903 413 KQEKLLVYEYQPNGSLFNLLHGSE----------NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFN 482 (626)
Q Consensus 413 ~~~~~lv~Ey~~~g~L~~~l~~~~----------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~ 482 (626)
++..+||||||++|+|.++|+... ....++|.+++.|+.|||+||+||| +++||||||||+|||++
T Consensus 87 ~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH----~~~iiHRDlKp~NILl~ 162 (299)
T 4asz_A 87 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA----SQHFVHRDLATRNCLVG 162 (299)
T ss_dssp SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEC
T ss_pred CCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCccCHhhEEEC
Confidence 999999999999999999996421 2357999999999999999999999 57999999999999999
Q ss_pred CCCCeEEeeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHH
Q 006903 483 NNMEPCISEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVH 556 (626)
Q Consensus 483 ~~~~~kl~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~ 556 (626)
+++.+||+|||+++...... ....+|..|+|||......++.++|||||||++|||+| |+.||... +..+...
T Consensus 163 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~-~~~~~~~ 241 (299)
T 4asz_A 163 ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL-SNNEVIE 241 (299)
T ss_dssp GGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS-CHHHHHH
T ss_pred CCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCC-CHHHHHH
Confidence 99999999999997543221 22357889999999998899999999999999999999 89998743 3444444
Q ss_pred HHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 557 SVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 557 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.+...... . .+..++..+.+++.+||+.||++||||+||++.|+++.+.
T Consensus 242 ~i~~~~~~-~----------~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 242 CITQGRVL-Q----------RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp HHHHTCCC-C----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHcCCCC-C----------CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 44333211 1 1122344588999999999999999999999999998754
No 2
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=3.3e-53 Score=435.36 Aligned_cols=256 Identities=18% Similarity=0.287 Sum_probs=207.8
Q ss_pred ccchhhhhcccccccccCCCcceEEEEeC------CCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEE
Q 006903 340 KLKFEDLLRAPAELLGRGKHGSLYRVVLD------DGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYC 411 (626)
Q Consensus 340 ~~~~~~l~~~~~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~ 411 (626)
.++++++. ..+.||+|+||+||+|.+. +++.||||+++... ...++|.+|+.++++++|||||+++|+|.
T Consensus 22 ei~~~~~~--~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~ 99 (308)
T 4gt4_A 22 EISLSAVR--FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT 99 (308)
T ss_dssp BCCGGGEE--EEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cCCHHHCe--EeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEE
Confidence 34444442 2477999999999999862 47899999997654 34578999999999999999999999999
Q ss_pred eCCeEEEEEeecCCCChhHhhcCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCC
Q 006903 412 SKQEKLLVYEYQPNGSLFNLLHGSEN-------------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNN 478 (626)
Q Consensus 412 ~~~~~~lv~Ey~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~N 478 (626)
+++..+||||||++|+|.++|+.... ...++|..+++|+.|||+||+||| +++||||||||+|
T Consensus 100 ~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH----~~~iiHRDLK~~N 175 (308)
T 4gt4_A 100 KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS----SHHVVHKDLATRN 175 (308)
T ss_dssp SSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGG
T ss_pred ECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH----hCCCCCCCccccc
Confidence 99999999999999999999964321 236899999999999999999999 5789999999999
Q ss_pred eeeCCCCCeEEeeccCccccCCC-----ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchh
Q 006903 479 ILFNNNMEPCISEYGLIVTENHD-----QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLA 552 (626)
Q Consensus 479 ILl~~~~~~kl~DFGl~~~~~~~-----~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~ 552 (626)
|||++++.+||+|||+++..... .....++..|+|||......++.++|||||||++|||+| |+.||.+ .+..
T Consensus 176 ILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~-~~~~ 254 (308)
T 4gt4_A 176 VLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG-YSNQ 254 (308)
T ss_dssp EEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT-CCHH
T ss_pred eEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCC-CCHH
Confidence 99999999999999998753221 223467889999999988899999999999999999999 8889864 3444
Q ss_pred HHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 553 TWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 553 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
+.+..+..... .. .++.++..+.+++.+||+.||++||||+||++.|+.+
T Consensus 255 ~~~~~i~~~~~-~~----------~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 255 DVVEMIRNRQV-LP----------CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHHHHHHTTCC-CC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHHHHHcCCC-CC----------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 44444433221 11 1223345688999999999999999999999999875
No 3
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=5.8e-53 Score=437.61 Aligned_cols=259 Identities=20% Similarity=0.291 Sum_probs=206.6
Q ss_pred ccchhhhhcccccccccCCCcceEEEEeC------CCcEEEEEEcCCCCC-CHHHHHHHHHHhccCCCCCccccceEEEe
Q 006903 340 KLKFEDLLRAPAELLGRGKHGSLYRVVLD------DGLMLAVKRLRDWSI-SSEDFKNRMQKIDHVKHPNVLPPLAYYCS 412 (626)
Q Consensus 340 ~~~~~~l~~~~~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~-~~~~~~~ei~~l~~l~H~nIv~l~g~~~~ 412 (626)
.++.+|+. ..+.||+|+||+||+|++. +++.||||+++.... ..++|.+|+++|++++|||||+++|+|.+
T Consensus 37 ~i~~~d~~--l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~ 114 (329)
T 4aoj_A 37 HIKRRDIV--LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTE 114 (329)
T ss_dssp BCCGGGEE--EEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred ccCHHHeE--EEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE
Confidence 34445553 2478999999999999864 478999999986542 34679999999999999999999999999
Q ss_pred CCeEEEEEeecCCCChhHhhcCCCC------------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCee
Q 006903 413 KQEKLLVYEYQPNGSLFNLLHGSEN------------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNIL 480 (626)
Q Consensus 413 ~~~~~lv~Ey~~~g~L~~~l~~~~~------------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NIL 480 (626)
.+..+||||||++|+|.++++.... ..+++|.+++.|+.|||+||+||| +++||||||||+|||
T Consensus 115 ~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH----~~~iiHRDLKp~NIL 190 (329)
T 4aoj_A 115 GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA----GLHFVHRDLATRNCL 190 (329)
T ss_dssp SSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEE
T ss_pred CCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh----cCCeecccccHhhEE
Confidence 9999999999999999999975321 246999999999999999999999 578999999999999
Q ss_pred eCCCCCeEEeeccCccccCCC-----ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHH
Q 006903 481 FNNNMEPCISEYGLIVTENHD-----QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATW 554 (626)
Q Consensus 481 l~~~~~~kl~DFGl~~~~~~~-----~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~ 554 (626)
|++++.+||+|||+++..... .....+|..|+|||......++.++|||||||++|||+| |+.||... +..+.
T Consensus 191 l~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~-~~~~~ 269 (329)
T 4aoj_A 191 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL-SNTEA 269 (329)
T ss_dssp EETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSS-CHHHH
T ss_pred ECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCC-CHHHH
Confidence 999999999999999754322 123457889999999999999999999999999999999 89998743 33344
Q ss_pred HHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 555 VHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 555 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
+..+...... . .+..++..+.+|+.+||+.||++||||+||+++|+.+.+.
T Consensus 270 ~~~i~~g~~~-~----------~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 270 IDCITQGREL-E----------RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp HHHHHHTCCC-C----------CCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHHHHcCCCC-C----------CcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 4443332211 1 1122334588999999999999999999999999998754
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-52 Score=429.47 Aligned_cols=260 Identities=20% Similarity=0.345 Sum_probs=204.0
Q ss_pred cccchhhhhcccccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCH---HHHHHHHHHhccCCCCCccccceEEEeCCe
Q 006903 339 NKLKFEDLLRAPAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVLPPLAYYCSKQE 415 (626)
Q Consensus 339 ~~~~~~~l~~~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~---~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~ 415 (626)
+.++++++. ..+.||+|+||+||+|++.+ .||||+++...... +.|.+|++++++++|||||+++|++. ++.
T Consensus 31 Wei~~~~l~--l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~ 105 (307)
T 3omv_A 31 WEIEASEVM--LSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDN 105 (307)
T ss_dssp CBCCTTSCC--EEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSS
T ss_pred cEEcHHHeE--EeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCe
Confidence 345555553 35789999999999999753 59999997655433 57899999999999999999999865 567
Q ss_pred EEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCc
Q 006903 416 KLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLI 495 (626)
Q Consensus 416 ~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~ 495 (626)
.+||||||++|+|.++|+.. ...++|.+++.|+.|||+||+||| +++||||||||+||||++++.+||+|||+|
T Consensus 106 ~~iVmEy~~gGsL~~~l~~~--~~~l~~~~~~~i~~qia~gL~yLH----~~~IiHRDlKp~NILl~~~~~~Ki~DFGla 179 (307)
T 3omv_A 106 LAIVTQWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLH----AKNIIHRDMKSNNIFLHEGLTVKIGDFGLA 179 (307)
T ss_dssp CEEEEECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHH----HTTCBCSCCCSSSEEEETTEEEEECCCSSC
T ss_pred EEEEEEcCCCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHH----HCCccCCccCHHHEEECCCCcEEEeeccCc
Confidence 89999999999999999742 356999999999999999999999 579999999999999999999999999999
Q ss_pred cccCC-----Cccccccccccchhhcccc---CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccccc
Q 006903 496 VTENH-----DQSFLAQTSSLKINDISNQ---MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEV 567 (626)
Q Consensus 496 ~~~~~-----~~~~~~~~~~~~~pe~~~~---~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 567 (626)
+.... ......||+.|+|||++.. ..++.++|||||||++|||+||+.||.+..+.......+.........
T Consensus 180 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~ 259 (307)
T 3omv_A 180 TVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDL 259 (307)
T ss_dssp BC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCS
T ss_pred eecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCc
Confidence 75332 1233568999999998753 357899999999999999999999997544433333222222111110
Q ss_pred ccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 568 FDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 568 ~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
......++..+.+++.+||+.||++||||.||++.|+.++..
T Consensus 260 -------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 260 -------SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp -------TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred -------ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 011223345688999999999999999999999999988643
No 5
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.1e-51 Score=424.48 Aligned_cols=258 Identities=22% Similarity=0.309 Sum_probs=197.1
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCC----eEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ----EKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~----~~~lv~Ey~~~g 426 (626)
.+.||+|+||+||+|++ +|+.||||+++........+..|+..+.+++|||||+++|+|..++ ..|||||||++|
T Consensus 8 ~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~g 86 (303)
T 3hmm_A 8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHG 86 (303)
T ss_dssp EEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTC
T ss_pred EEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCC
Confidence 47899999999999998 5899999999764333333456777778899999999999998754 579999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhc----cCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEEL----REDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ 502 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~----~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~ 502 (626)
+|.++|+. ..++|..+.+++.|+++||+|||+.+ +.++||||||||+|||++.++++||+|||+++......
T Consensus 87 sL~~~l~~----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~ 162 (303)
T 3hmm_A 87 SLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 162 (303)
T ss_dssp BHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTT
T ss_pred cHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCC
Confidence 99999974 35899999999999999999999532 24599999999999999999999999999987543221
Q ss_pred -------cccccccccchhhccccC------CCCCcchhHHHHHHHHHHHcCCCCCCCCc--------------chhHHH
Q 006903 503 -------SFLAQTSSLKINDISNQM------CSTIKADVYGFGVILLELLTGKLVQNNGF--------------NLATWV 555 (626)
Q Consensus 503 -------~~~~~~~~~~~pe~~~~~------~~~~k~DVwSfGvvl~elltg~~p~~~~~--------------~~~~~~ 555 (626)
....||+.|+|||++... .++.++|||||||++|||+||+.|+.... ......
T Consensus 163 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 242 (303)
T 3hmm_A 163 DTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMR 242 (303)
T ss_dssp TEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHH
T ss_pred CceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHH
Confidence 224689999999987643 25679999999999999999987754211 111111
Q ss_pred HHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccc
Q 006903 556 HSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618 (626)
Q Consensus 556 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~ 618 (626)
....... .++.++......+.+..+.+++.+||+.||++||||.||++.|+++.+++.
T Consensus 243 ~~~~~~~-----~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~~ 300 (303)
T 3hmm_A 243 KVVCEQK-----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 300 (303)
T ss_dssp HHHTTSC-----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred HHHhccc-----CCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHcC
Confidence 1111111 111111222234556778999999999999999999999999999976543
No 6
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.9e-50 Score=419.23 Aligned_cols=241 Identities=21% Similarity=0.334 Sum_probs=197.9
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||+||+|+. .+|+.||||+++..... .+.+.+|+++|++++|||||++++++.+++..|||||||++|
T Consensus 29 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg 108 (350)
T 4b9d_A 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGG 108 (350)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred eEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCC
Confidence 47899999999999984 57999999999765533 356899999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---c
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ---S 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~---~ 503 (626)
+|.+++... ....+++.....|+.||+.||.||| ++|||||||||+||||+.++.+||+|||+++...... .
T Consensus 109 ~L~~~i~~~-~~~~~~e~~~~~~~~qi~~aL~ylH----~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 183 (350)
T 4b9d_A 109 DLFKRINAQ-KGVLFQEDQILDWFVQICLALKHVH----DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELAR 183 (350)
T ss_dssp BHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHH----HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHHH
T ss_pred cHHHHHHHc-CCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeeccCCHHHEEECCCCCEEEcccccceeecCCccccc
Confidence 999999643 3456789999999999999999999 6799999999999999999999999999998654322 2
Q ss_pred ccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 504 FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
...||+.|++||++.+..|+.++|||||||++|||+||+.||... +..+.+..+....... .+.....
T Consensus 184 ~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~-~~~~~~~~i~~~~~~~-----------~~~~~s~ 251 (350)
T 4b9d_A 184 ACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG-SMKNLVLKIISGSFPP-----------VSLHYSY 251 (350)
T ss_dssp HHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS-SHHHHHHHHHHTCCCC-----------CCTTSCH
T ss_pred ccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-CHHHHHHHHHcCCCCC-----------CCccCCH
Confidence 356899999999999889999999999999999999999999754 4455555555443221 0111233
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 584 KLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+.+++.+||+.||++|||++|+++
T Consensus 252 ~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 252 DLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHccCChhHCcCHHHHhc
Confidence 5788999999999999999999976
No 7
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=5.2e-50 Score=407.16 Aligned_cols=239 Identities=22% Similarity=0.314 Sum_probs=196.0
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEe----CCeEEEEEeec
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCS----KQEKLLVYEYQ 423 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~----~~~~~lv~Ey~ 423 (626)
+.||+|+||+||+|.. .++..||||++...... .+.|.+|++++++++|||||+++++|.+ ++..|||||||
T Consensus 32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~ 111 (290)
T 3fpq_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELM 111 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCC
Confidence 5699999999999985 56899999999765433 3568999999999999999999999875 34579999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCC--ceeccCCCCCeeeCC-CCCeEEeeccCccccCC
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDG--IAHGNLKSNNILFNN-NMEPCISEYGLIVTENH 500 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~--ivHrDlkp~NILl~~-~~~~kl~DFGl~~~~~~ 500 (626)
++|+|.++++. ...+++..+..++.||+.||+||| +++ ||||||||+|||++. ++.+||+|||+|+....
T Consensus 112 ~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~ylH----~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 112 TSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLH----TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp CSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred CCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 99999999963 357999999999999999999999 455 999999999999984 78999999999976433
Q ss_pred C-ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccH
Q 006903 501 D-QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASE 579 (626)
Q Consensus 501 ~-~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 579 (626)
. .....||+.|+|||+..+ .++.++|||||||++|||+||+.||.+..+.......+....... .++ ...
T Consensus 185 ~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~-~~~-----~~~-- 255 (290)
T 3fpq_A 185 SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA-SFD-----KVA-- 255 (290)
T ss_dssp TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCG-GGG-----GCC--
T ss_pred CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCC-CCC-----ccC--
Confidence 2 234578999999998865 589999999999999999999999986655555554444332111 111 111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 580 ERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 580 ~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+.+.+++.+||+.||++|||++|+++
T Consensus 256 --~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 256 --IPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp --CHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred --CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 234788999999999999999999975
No 8
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=5.8e-50 Score=413.77 Aligned_cols=245 Identities=17% Similarity=0.224 Sum_probs=200.8
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
.+.||+|+||.||+|+. .+|+.||||+++.... ..+|++++++++|||||++++++.+++..|||||||++|+|.
T Consensus 63 ~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~ 138 (336)
T 4g3f_A 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLG 138 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHH
T ss_pred CcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHH
Confidence 46799999999999995 5799999999976432 247999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC-CeEEeeccCccccCCC-------
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM-EPCISEYGLIVTENHD------- 501 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGl~~~~~~~------- 501 (626)
++++. ...+++..+..++.||+.||+||| +++||||||||+|||++.++ .+||+|||+++.....
T Consensus 139 ~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH----~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~ 211 (336)
T 4g3f_A 139 QLIKQ---MGCLPEDRALYYLGQALEGLEYLH----TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL 211 (336)
T ss_dssp HHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----------
T ss_pred HHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccccee
Confidence 99963 346999999999999999999999 78999999999999999987 6999999999754321
Q ss_pred -ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHH
Q 006903 502 -QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 502 -~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
.....||+.|+|||++....|+.++|||||||++|||+||+.||..... .+....+........ ..++.
T Consensus 212 ~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~-~~~~~~i~~~~~~~~---------~~~~~ 281 (336)
T 4g3f_A 212 TGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR-GPLCLKIASEPPPIR---------EIPPS 281 (336)
T ss_dssp --CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCC-SCCHHHHHHSCCGGG---------GSCTT
T ss_pred cCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH-HHHHHHHHcCCCCch---------hcCcc
Confidence 1234689999999999988999999999999999999999999974322 222333333221111 11122
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 581 RMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
....+.+++.+||+.||++|||+.|+++.|.....+
T Consensus 282 ~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~ 317 (336)
T 4g3f_A 282 CAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQE 317 (336)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence 334588899999999999999999999998876543
No 9
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2.7e-50 Score=421.00 Aligned_cols=259 Identities=19% Similarity=0.266 Sum_probs=205.9
Q ss_pred cchhhhhcccccccccCCCcceEEEEeC------CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCC-CCccccceEEE
Q 006903 341 LKFEDLLRAPAELLGRGKHGSLYRVVLD------DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKH-PNVLPPLAYYC 411 (626)
Q Consensus 341 ~~~~~l~~~~~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H-~nIv~l~g~~~ 411 (626)
++.+++. ..+.||+|+||+||+|.+. +++.||||.++.... ..++|.+|+++|.+++| ||||+++|+|.
T Consensus 61 i~~~~~~--l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~ 138 (353)
T 4ase_A 61 FPRDRLK--LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT 138 (353)
T ss_dssp CCGGGEE--EEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ecHHHeE--EeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEE
Confidence 4444442 3578999999999999843 246899999976543 23579999999999965 89999999987
Q ss_pred eC-CeEEEEEeecCCCChhHhhcCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCC
Q 006903 412 SK-QEKLLVYEYQPNGSLFNLLHGSEN-------------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSN 477 (626)
Q Consensus 412 ~~-~~~~lv~Ey~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~ 477 (626)
.+ +..++|||||++|+|.++|+.... ...++|..++.++.|||+||+||| +++||||||||+
T Consensus 139 ~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH----~~~iiHRDLK~~ 214 (353)
T 4ase_A 139 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA----SRKCIHRDLAAR 214 (353)
T ss_dssp CTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGG
T ss_pred ecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh----hCCeecCccCcc
Confidence 65 568999999999999999974321 245899999999999999999999 679999999999
Q ss_pred CeeeCCCCCeEEeeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcch
Q 006903 478 NILFNNNMEPCISEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNL 551 (626)
Q Consensus 478 NILl~~~~~~kl~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~ 551 (626)
|||+++++.+||+|||+++...... ....+|..|+|||.+....++.++|||||||++|||+| |+.||.+....
T Consensus 215 NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~ 294 (353)
T 4ase_A 215 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 294 (353)
T ss_dssp GEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred ceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH
Confidence 9999999999999999998643322 22457888999999998899999999999999999998 89999754333
Q ss_pred hHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 552 ATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 552 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
..... .......... ++.+...+.+++.+||+.||++||||.||++.|+++.+.
T Consensus 295 ~~~~~-~i~~g~~~~~----------p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 295 EEFCR-RLKEGTRMRA----------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp HHHHH-HHHHTCCCCC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHH-HHHcCCCCCC----------CccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 33332 2222222111 112234588999999999999999999999999988653
No 10
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=8.9e-50 Score=413.59 Aligned_cols=239 Identities=18% Similarity=0.272 Sum_probs=200.1
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+++|++++|||||+++++|.+++..|||||||++|+|.
T Consensus 80 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~ 159 (346)
T 4fih_A 80 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 159 (346)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHH
T ss_pred EEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHH
Confidence 6799999999999995 579999999997544 34567899999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---ccccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSFLA 506 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~~~ 506 (626)
+++.. ..+++..+..++.||+.||+||| +++||||||||+|||++.++.+||+|||+++..... .....
T Consensus 160 ~~l~~----~~l~e~~~~~~~~qi~~aL~ylH----~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~ 231 (346)
T 4fih_A 160 DIVTH----TRMNEEQIAAVCLAVLQALSVLH----AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLV 231 (346)
T ss_dssp HHHHH----SCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCC
T ss_pred HHHHc----CCCCHHHHHHHHHHHHHHHHHHH----HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccccc
Confidence 99963 35899999999999999999999 679999999999999999999999999998764332 23467
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLL 586 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~ 586 (626)
||+.|+|||++....|+.++|||||||++|||+||+.||.+. +..+.+..+..... ..... .......+.
T Consensus 232 GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~-~~~~~~~~i~~~~~-~~~~~--------~~~~s~~~~ 301 (346)
T 4fih_A 232 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE-PPLKAMKMIRDNLP-PRLKN--------LHKVSPSLK 301 (346)
T ss_dssp SCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS-CHHHHHHHHHHSSC-CCCSC--------GGGSCHHHH
T ss_pred cCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-CHHHHHHHHHcCCC-CCCCc--------cccCCHHHH
Confidence 999999999998888999999999999999999999999754 33333333332211 11100 011223578
Q ss_pred HHHhhccCCCCCCCCCHHHHHH
Q 006903 587 QVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 587 ~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+++.+||+.||++|||++|+++
T Consensus 302 dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 302 GFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHcCCChhHCcCHHHHhc
Confidence 8999999999999999999976
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.3e-48 Score=414.69 Aligned_cols=240 Identities=18% Similarity=0.264 Sum_probs=200.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|+++|++++|||||+++++|.+++..|||||||++|+|
T Consensus 156 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L 235 (423)
T 4fie_A 156 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 235 (423)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred eeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcH
Confidence 36799999999999995 579999999997654 3456789999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---cccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSFL 505 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~~ 505 (626)
.++++. ..+++..+..|+.||+.||+||| +++||||||||+||||+.++.+||+|||+++..... ....
T Consensus 236 ~~~i~~----~~l~e~~~~~~~~qil~aL~ylH----~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~ 307 (423)
T 4fie_A 236 TDIVTH----TRMNEEQIAAVCLAVLQALSVLH----AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSL 307 (423)
T ss_dssp HHHHHH----SCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCC
T ss_pred HHHHhc----cCCCHHHHHHHHHHHHHHHHHHH----HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCcccccc
Confidence 999963 35899999999999999999999 679999999999999999999999999998764332 2346
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.||+.|+|||++....|+.++|||||||++|||++|+.||.+.. ..+.+..+..... ..... .......+
T Consensus 308 ~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~-~~~~~~~i~~~~~-~~~~~--------~~~~s~~~ 377 (423)
T 4fie_A 308 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP-PLKAMKMIRDNLP-PRLKN--------LHKVSPSL 377 (423)
T ss_dssp EECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-HHHHHHHHHHSCC-CCCSC--------TTSSCHHH
T ss_pred ccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-HHHHHHHHHcCCC-CCCcc--------cccCCHHH
Confidence 78999999999998899999999999999999999999997543 3333333332211 11100 01122347
Q ss_pred HHHHhhccCCCCCCCCCHHHHHH
Q 006903 586 LQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+|+.+||+.||++|||++|+++
T Consensus 378 ~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 378 KGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHcCCChhHCcCHHHHhc
Confidence 88999999999999999999987
No 12
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.7e-49 Score=403.99 Aligned_cols=238 Identities=18% Similarity=0.277 Sum_probs=201.1
Q ss_pred cccccccCCCcceEEEE-eCCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecC
Q 006903 350 PAELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
..+.||+|+||+||+|+ ..+|+.||||++.+.. ...+.+.+|+++|++++|||||++++++.+++..|+|||||+
T Consensus 36 i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~ 115 (311)
T 4aw0_A 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAK 115 (311)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCC
Confidence 35789999999999998 4679999999997532 345679999999999999999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--- 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--- 501 (626)
+|+|.+++.. ...+++.....++.||+.||+||| +++||||||||+|||++.++.+||+|||+++.....
T Consensus 116 gG~L~~~i~~---~~~l~e~~~~~~~~qi~~al~ylH----~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~ 188 (311)
T 4aw0_A 116 NGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLH----GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188 (311)
T ss_dssp TEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence 9999999963 346999999999999999999999 679999999999999999999999999999764321
Q ss_pred --ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccH
Q 006903 502 --QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASE 579 (626)
Q Consensus 502 --~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 579 (626)
.....||+.|+|||+.....|+.++||||+||++|||+||+.||... +..+....+....... . +..
T Consensus 189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~-~~~~~~~~i~~~~~~~---p-----~~~-- 257 (311)
T 4aw0_A 189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-NEGLIFAKIIKLEYDF---P-----EKF-- 257 (311)
T ss_dssp CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHTCCCC---C-----TTC--
T ss_pred ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHcCCCCC---C-----ccc--
Confidence 23457999999999999889999999999999999999999999743 4445555554443211 0 112
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 006903 580 ERMLKLLQVALRCINQSPNERPSMNQVA 607 (626)
Q Consensus 580 ~~~~~l~~l~~~Cl~~dP~~RPs~~ev~ 607 (626)
...+.+++.+||+.||++|||++|+.
T Consensus 258 --s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 258 --FPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp --CHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred --CHHHHHHHHHHccCCHhHCcChHHHc
Confidence 23478899999999999999999864
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.4e-48 Score=393.26 Aligned_cols=237 Identities=18% Similarity=0.268 Sum_probs=187.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||+||+|+. .+|+.||||++++.. ...+.+.+|++++++++|||||++++++.+++..|+||||+ +
T Consensus 18 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~ 96 (275)
T 3hyh_A 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-G 96 (275)
T ss_dssp EEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-C
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-C
Confidence 47899999999999994 579999999997543 23457899999999999999999999999999999999999 6
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC--cc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--QS 503 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--~~ 503 (626)
|+|.+++.. ...+++.....++.||+.||+||| +++|+||||||+|||+++++.+||+|||+++..... ..
T Consensus 97 g~L~~~l~~---~~~l~e~~~~~~~~qi~~al~ylH----~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~ 169 (275)
T 3hyh_A 97 NELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCH----RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLK 169 (275)
T ss_dssp EEHHHHHHH---SCSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCTTTEEECTTCCEEECCSSCC----------
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCccC
Confidence 899999964 346999999999999999999999 679999999999999999999999999999764332 23
Q ss_pred ccccccccchhhccccCCC-CCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 504 FLAQTSSLKINDISNQMCS-TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~-~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
...||+.|+|||+.....+ +.++||||+||++|||+||+.||.. .+..+..+.+....... +....
T Consensus 170 ~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~-~~~~~~~~~i~~~~~~~------------p~~~s 236 (275)
T 3hyh_A 170 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD-ESIPVLFKNISNGVYTL------------PKFLS 236 (275)
T ss_dssp -----CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHTCCCC------------CTTSC
T ss_pred CeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCC-CCHHHHHHHHHcCCCCC------------CCCCC
Confidence 4578999999999877665 6899999999999999999999974 34445555444433211 01112
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..+.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 237 PGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHccCChhHCcCHHHHHc
Confidence 34778999999999999999999987
No 14
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=4e-48 Score=396.45 Aligned_cols=240 Identities=19% Similarity=0.283 Sum_probs=185.3
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCC------------e
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ------------E 415 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~------------~ 415 (626)
.+.||+|+||+||+|+. .+|+.||||+++.... ..+.+.+|+++|++++|||||++++++.+.+ .
T Consensus 10 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~ 89 (299)
T 4g31_A 10 IQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVY 89 (299)
T ss_dssp EEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEE
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcE
Confidence 47899999999999984 5799999999975442 2357899999999999999999999987654 3
Q ss_pred EEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCc
Q 006903 416 KLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLI 495 (626)
Q Consensus 416 ~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~ 495 (626)
.|+|||||++|+|.+++.........++..++.++.||+.||+||| +++||||||||+|||++.++.+||+|||++
T Consensus 90 l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH----~~~IiHRDlKp~NILl~~~~~vKl~DFGla 165 (299)
T 4g31_A 90 LYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH----SKGLMHRDLKPSNIFFTMDDVVKVGDFGLV 165 (299)
T ss_dssp EEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTCCEEECCCCCC
T ss_pred EEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH----HCcCccccCcHHHeEECCCCcEEEccCccc
Confidence 6899999999999999975444445677888999999999999999 679999999999999999999999999998
Q ss_pred cccCCCc---------------cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhh
Q 006903 496 VTENHDQ---------------SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVR 560 (626)
Q Consensus 496 ~~~~~~~---------------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~ 560 (626)
+...... ....||+.|+|||+.....|+.++|||||||++|||++ ||....+..........
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~~~~ 242 (299)
T 4g31_A 166 TAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVRN 242 (299)
T ss_dssp --------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHT
T ss_pred eecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHHHhc
Confidence 7543211 12358999999999998899999999999999999997 66543222222222221
Q ss_pred cccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 561 EEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 561 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
... .+ ...+..+.+.+++.+||+.||++|||+.|+++
T Consensus 243 ~~~-----p~------~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 243 LKF-----PP------LFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp TCC-----CH------HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCC-----CC------CCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111 11 11122334678999999999999999999987
No 15
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.1e-48 Score=399.35 Aligned_cols=238 Identities=20% Similarity=0.277 Sum_probs=192.0
Q ss_pred ccccccCCCcceEEEEe----CCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVL----DDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~----~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.+.||+|+||+||+|+. .+++.||||+++.... ....+.+|+++|++++|||||++++++.+++..|+|||||
T Consensus 29 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~ 108 (304)
T 3ubd_A 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFL 108 (304)
T ss_dssp EEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEECCC
T ss_pred EEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcC
Confidence 47899999999999984 2478999999975432 2346889999999999999999999999999999999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH--- 500 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~--- 500 (626)
++|+|.+++.. ...+++..+..++.|++.||+||| +++||||||||+|||++.++.+||+|||+++....
T Consensus 109 ~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH----~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 181 (304)
T 3ubd_A 109 RGGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLH----SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK 181 (304)
T ss_dssp TTCEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----C
T ss_pred CCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCCc
Confidence 99999999963 346999999999999999999999 67999999999999999999999999999975322
Q ss_pred CccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHH
Q 006903 501 DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 501 ~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
......||+.|+|||+.....|+.++||||+||++|||+||+.||... +..+....+....... +..
T Consensus 182 ~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~-~~~~~~~~i~~~~~~~------------p~~ 248 (304)
T 3ubd_A 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK-DRKETMTMILKAKLGM------------PQF 248 (304)
T ss_dssp CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCC------------CTT
T ss_pred cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc-CHHHHHHHHHcCCCCC------------CCc
Confidence 223457899999999999899999999999999999999999999743 4445555544432211 111
Q ss_pred HHHHHHHHHhhccCCCCCCCCCH-----HHHHH
Q 006903 581 RMLKLLQVALRCINQSPNERPSM-----NQVAV 608 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RPs~-----~ev~~ 608 (626)
....+.+++.+||+.||++|||+ +|+++
T Consensus 249 ~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 249 LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp SCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred CCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 22347889999999999999984 56654
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-44 Score=383.78 Aligned_cols=249 Identities=17% Similarity=0.190 Sum_probs=192.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeC------CeEEEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSK------QEKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~------~~~~lv~ 420 (626)
.+.||+|+||+||+|+. .+|+.||||+++..... .+.+.+|+++|++++|||||++++++... +..||||
T Consensus 59 ~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivm 138 (398)
T 4b99_A 59 IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVL 138 (398)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEE
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEE
Confidence 47899999999999984 57999999999765433 34688999999999999999999987643 5689999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
|||+ |+|.+++.. ...+++..+..++.||+.||.||| ++|||||||||+|||++.++.+||+|||+++....
T Consensus 139 E~~~-g~L~~~i~~---~~~l~~~~~~~~~~qil~al~ylH----~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~ 210 (398)
T 4b99_A 139 DLME-SDLHQIIHS---SQPLTLEHVRYFLYQLLRGLKYMH----SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCT 210 (398)
T ss_dssp ECCS-EEHHHHHTS---SSCCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC--
T ss_pred eCCC-CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCcCcCCCcCccccccCCCCCEEEeecceeeeccc
Confidence 9996 789999953 457999999999999999999999 67999999999999999999999999999875321
Q ss_pred -------Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccc--ccccH
Q 006903 501 -------DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTV--EVFDE 570 (626)
Q Consensus 501 -------~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~--~~~d~ 570 (626)
......||+.|+|||+..+ ..++.++||||+||++|||+||+.||.+... .+.+..+....... .....
T Consensus 211 ~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~-~~~l~~I~~~~g~p~~~~~~~ 289 (398)
T 4b99_A 211 SPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNY-VHQLQLIMMVLGTPSPAVIQA 289 (398)
T ss_dssp -----CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSH-HHHHHHHHHHHCCCCGGGTC-
T ss_pred CccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCH-HHHHHHHHHhcCCCChHHhhh
Confidence 1234578999999998765 4569999999999999999999999975433 33333322211100 00000
Q ss_pred --------HHHh---------hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 571 --------VLIA---------EAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 571 --------~~~~---------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.... ....+.....+.+|+.+||+.||++|||++|+++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 290 VGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp ----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 0000 0000111235789999999999999999999987
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=4.4e-44 Score=376.24 Aligned_cols=247 Identities=19% Similarity=0.263 Sum_probs=191.5
Q ss_pred ccccccCCCcceEEEEe----CCCcEEEEEEcCCCCCCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL----DDGLMLAVKRLRDWSISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~----~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||+||+|+. .+++.||||++... .....+.+|+++|+.+ +|||||++++++.+++..|+||||+++
T Consensus 26 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~-~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g 104 (361)
T 4f9c_A 26 EDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT-SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEH 104 (361)
T ss_dssp EEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT-SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCC
T ss_pred EEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc-cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCc
Confidence 57899999999999974 25789999998654 3456788999999988 699999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC-CCeEEeeccCccccCCC---
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN-MEPCISEYGLIVTENHD--- 501 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGl~~~~~~~--- 501 (626)
|+|.+++. .+++.++..++.|++.||+||| ++|||||||||+|||++.+ +.+||+|||+|+.....
T Consensus 105 ~~L~~~~~------~l~~~~~~~~~~qll~al~ylH----~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~ 174 (361)
T 4f9c_A 105 ESFLDILN------SLSFQEVREYMLNLFKALKRIH----QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIE 174 (361)
T ss_dssp CCHHHHHT------TCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCG
T ss_pred ccHHHHHc------CCCHHHHHHHHHHHHHHHHHHH----HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccc
Confidence 99999993 4889999999999999999999 6799999999999999876 79999999998643211
Q ss_pred ----------------------------ccccccccccchhhccccC-CCCCcchhHHHHHHHHHHHcCCCCCCCCcchh
Q 006903 502 ----------------------------QSFLAQTSSLKINDISNQM-CSTIKADVYGFGVILLELLTGKLVQNNGFNLA 552 (626)
Q Consensus 502 ----------------------------~~~~~~~~~~~~pe~~~~~-~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~ 552 (626)
.....||+.|+|||+..+. .++.++||||+||++|||+||+.||..+.+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~ 254 (361)
T 4f9c_A 175 LLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDL 254 (361)
T ss_dssp GGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHH
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHH
Confidence 1123589999999987654 58999999999999999999999997665544
Q ss_pred HHHHHHhhcccc-----------------ccc----c----------c---HHHHh--------hhccHHHHHHHHHHHh
Q 006903 553 TWVHSVVREEWT-----------------VEV----F----------D---EVLIA--------EAASEERMLKLLQVAL 590 (626)
Q Consensus 553 ~~~~~~~~~~~~-----------------~~~----~----------d---~~~~~--------~~~~~~~~~~l~~l~~ 590 (626)
+.+..+...... .+. . + +.... ..........+.+|+.
T Consensus 255 ~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~ 334 (361)
T 4f9c_A 255 TALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLD 334 (361)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHHH
T ss_pred HHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHH
Confidence 433322210000 000 0 0 00000 0000111245789999
Q ss_pred hccCCCCCCCCCHHHHHH
Q 006903 591 RCINQSPNERPSMNQVAV 608 (626)
Q Consensus 591 ~Cl~~dP~~RPs~~ev~~ 608 (626)
+||+.||++|||++|+++
T Consensus 335 ~lL~~dP~~R~ta~eaL~ 352 (361)
T 4f9c_A 335 KLLDLNPASRITAEEALL 352 (361)
T ss_dssp HHTCSCTTTSCCHHHHHT
T ss_pred HHCcCChhHCcCHHHHhc
Confidence 999999999999999976
No 18
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=3.3e-43 Score=391.34 Aligned_cols=244 Identities=20% Similarity=0.302 Sum_probs=201.8
Q ss_pred cccccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 350 PAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
..+.||+|+||.||+|.. .+|+.||+|++.... ...+.+.+|+++|+.++|||||++++++.+++..|+|||||++|+
T Consensus 161 i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~ 240 (573)
T 3uto_A 161 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGE 240 (573)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCB
T ss_pred EEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCc
Confidence 357899999999999985 579999999997654 234678899999999999999999999999999999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC--CCeEEeeccCccccCCCc--c
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN--MEPCISEYGLIVTENHDQ--S 503 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~--~~~kl~DFGl~~~~~~~~--~ 503 (626)
|.+++.. ....+++.++..++.||+.||.||| +++|+||||||+|||++.+ +.+||+|||+++...... .
T Consensus 241 L~~~i~~--~~~~l~e~~~~~~~~qi~~al~ylH----~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~ 314 (573)
T 3uto_A 241 LFEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMH----ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 314 (573)
T ss_dssp HHHHHTC--TTSCEEHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEE
T ss_pred HHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCcee
Confidence 9999963 2356899999999999999999999 6799999999999999854 889999999998654332 3
Q ss_pred ccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 504 FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
...||+.|+|||++....|+.++||||+||++|||++|+.||.+. +..+.+..+....+... +.. ......
T Consensus 315 ~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~-~~~~~~~~i~~~~~~~~--~~~------~~~~s~ 385 (573)
T 3uto_A 315 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE-NDDETLRNVKSCDWNMD--DSA------FSGISE 385 (573)
T ss_dssp EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS-SHHHHHHHHHTTCCCCC--SGG------GTTSCH
T ss_pred eeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-CHHHHHHHHHhCCCCCC--ccc------ccCCCH
Confidence 457899999999999889999999999999999999999999754 33444444444332211 000 011123
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 584 KLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+.+|+.+||+.||++|||+.|+++
T Consensus 386 ~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 386 DGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHccCChhHCcCHHHHhc
Confidence 4778999999999999999999987
No 19
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=3.4e-43 Score=389.43 Aligned_cols=239 Identities=17% Similarity=0.169 Sum_probs=192.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHH---HHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFK---NRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~---~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
.++||+|+||+||+|+. .+|+.||||++++.. .....+. .++++++.++|||||+++++|.+++..|+||||
T Consensus 194 ~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy 273 (689)
T 3v5w_A 194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDL 273 (689)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEec
Confidence 57899999999999995 579999999996432 2223333 346777888999999999999999999999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC-C
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH-D 501 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~-~ 501 (626)
|+||+|.++|.. ...+++.....++.||+.||.||| ++|||||||||+||||+.++.+||+|||+|+.... .
T Consensus 274 ~~GGdL~~~l~~---~~~l~E~~a~~y~~qIl~aL~yLH----~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~ 346 (689)
T 3v5w_A 274 MNGGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHMH----NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 346 (689)
T ss_dssp CCSCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCC
T ss_pred CCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCchHHeEEeCCCCEEecccceeeecCCCC
Confidence 999999999963 346999999999999999999999 78999999999999999999999999999976443 3
Q ss_pred ccccccccccchhhccc-cCCCCCcchhHHHHHHHHHHHcCCCCCCCCc--chhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 502 QSFLAQTSSLKINDISN-QMCSTIKADVYGFGVILLELLTGKLVQNNGF--NLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~-~~~~~~k~DVwSfGvvl~elltg~~p~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
....+||+.|+|||++. ...|+.++||||+||++|||+||+.||.... +..+........... .+
T Consensus 347 ~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~------------~p 414 (689)
T 3v5w_A 347 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE------------LP 414 (689)
T ss_dssp CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCC------------CC
T ss_pred CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC------------CC
Confidence 34467999999999985 4578999999999999999999999996422 222222232222111 01
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 006903 579 EERMLKLLQVALRCINQSPNERPS-----MNQVAV 608 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs-----~~ev~~ 608 (626)
......+.+|+.+||+.||++|++ ++||.+
T Consensus 415 ~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 415 DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 112234788999999999999998 677754
No 20
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=6.2e-42 Score=355.35 Aligned_cols=262 Identities=28% Similarity=0.464 Sum_probs=213.3
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCC-CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSI-SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~-~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
.+.||+|+||.||+|...+++.||||++..... ..+.+.+|+++++.++||||+++++++...+..++||||+++|+|.
T Consensus 44 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 123 (321)
T 2qkw_B 44 KFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLK 123 (321)
T ss_dssp CCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTG
T ss_pred cceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHH
Confidence 478999999999999988899999999876543 3467999999999999999999999999999999999999999999
Q ss_pred HhhcCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC-----cc
Q 006903 430 NLLHGSEN-GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD-----QS 503 (626)
Q Consensus 430 ~~l~~~~~-~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~-----~~ 503 (626)
+++..... ...++|..++.++.|++.||.||| +++|+||||||+||+++.++.+||+|||+++..... ..
T Consensus 124 ~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 199 (321)
T 2qkw_B 124 RHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH----TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLST 199 (321)
T ss_dssp GGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBC
T ss_pred HHHhccCCCccccCHHHHHHHHHHHHHHHHHhc----CCCeecCCCCHHHEEECCCCCEEEeeccccccccccccccccc
Confidence 99965332 236999999999999999999999 579999999999999999999999999998653221 12
Q ss_pred ccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCc-----chhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 504 FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGF-----NLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~-----~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
...++..|++||......++.++|||||||++|||+||+.||.... ....|..............++... ....
T Consensus 200 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 278 (321)
T 2qkw_B 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLA-DKIR 278 (321)
T ss_dssp CCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCT-TCSC
T ss_pred ccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhc-cccC
Confidence 3457888999999887788999999999999999999999986432 233333332222222223332221 1234
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 579 EERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
.+....+.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 279 ~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 279 PESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp HHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 567778999999999999999999999999999886543
No 21
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=5.3e-42 Score=356.44 Aligned_cols=262 Identities=31% Similarity=0.525 Sum_probs=212.0
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|...+|+.||||++..... ....+.+|+++++.++||||+++++++...+..++||||+++|+|
T Consensus 35 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 114 (326)
T 3uim_A 35 KNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSV 114 (326)
T ss_dssp TTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTTCBH
T ss_pred ceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEeccCCCH
Confidence 478999999999999988899999999976542 334789999999999999999999999999999999999999999
Q ss_pred hHhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc----c
Q 006903 429 FNLLHGSE-NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ----S 503 (626)
Q Consensus 429 ~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~----~ 503 (626)
.+++.... ....++|..+..++.|++.||.|||+.+ ..+|+||||||+|||++.++.+||+|||++....... .
T Consensus 115 ~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 193 (326)
T 3uim_A 115 ASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHC-DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT 193 (326)
T ss_dssp HHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSS-SSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSCEEC
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCC-CCCeEeCCCchhhEEECCCCCEEeccCccccccCcccccccc
Confidence 99997543 2346999999999999999999999532 2399999999999999999999999999987543221 2
Q ss_pred ccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCC-------CCcchhHHHHHHhhcccccccccHHHHhhh
Q 006903 504 FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQN-------NGFNLATWVHSVVREEWTVEVFDEVLIAEA 576 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~-------~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 576 (626)
...++..|++||......++.++|||||||++|||+||+.||. ......+|+.............+.... ..
T Consensus 194 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 272 (326)
T 3uim_A 194 AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQ-GN 272 (326)
T ss_dssp CCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCT-TS
T ss_pred cccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhc-cc
Confidence 2347889999999877778999999999999999999999985 222334444443333333333333222 23
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 006903 577 ASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIK 614 (626)
Q Consensus 577 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~ 614 (626)
...+....+.+++.+||+.||++|||+.||+++|+...
T Consensus 273 ~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 273 YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp CCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred cCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 45667788999999999999999999999999998643
No 22
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=6.2e-42 Score=353.46 Aligned_cols=250 Identities=19% Similarity=0.357 Sum_probs=201.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|++++++++||||+++++++.+++..++||||+++|+|
T Consensus 15 ~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 94 (310)
T 3s95_A 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTL 94 (310)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred cceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcH
Confidence 57899999999999995 568999999986543 3346789999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc------
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ------ 502 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~------ 502 (626)
.+++... ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 95 ~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH----~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 168 (310)
T 3s95_A 95 RGIIKSM--DSQYPWSQRVSFAKDIASGMAYLH----SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGL 168 (310)
T ss_dssp HHHHHHC--CTTSCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC---------
T ss_pred HHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCCcCeEEECCCCCEEEeecccceeccccccccccc
Confidence 9999742 356999999999999999999999 5799999999999999999999999999986532211
Q ss_pred -----------cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHH
Q 006903 503 -----------SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEV 571 (626)
Q Consensus 503 -----------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 571 (626)
....++..|++||......++.++|||||||++|||++|..|+......... ...... .
T Consensus 169 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~---------~~~~~~-~ 238 (310)
T 3s95_A 169 RSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD---------FGLNVR-G 238 (310)
T ss_dssp -----------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT---------SSBCHH-H
T ss_pred ccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH---------Hhhhhh-c
Confidence 1345788899999998888999999999999999999999887532111000 000000 0
Q ss_pred HHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 572 LIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 572 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
......+......+.+++.+||+.||++|||+.|+++.|+.++..
T Consensus 239 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 239 FLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp HHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 000011122234588899999999999999999999999998764
No 23
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=7.5e-42 Score=353.00 Aligned_cols=250 Identities=27% Similarity=0.355 Sum_probs=197.4
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCH---HHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~---~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|+. +|+.||||++....... +.+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 42 ~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 120 (309)
T 3p86_A 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGS 120 (309)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCB
T ss_pred eeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCc
Confidence 47899999999999987 58899999997665433 468899999999999999999999999999999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCC--ceeccCCCCCeeeCCCCCeEEeeccCccccCCC---c
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDG--IAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---Q 502 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~--ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~ 502 (626)
|.+++........+++..++.++.|++.||+||| +.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 121 L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 196 (309)
T 3p86_A 121 LYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH----NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSS 196 (309)
T ss_dssp HHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH----TSSSCCCCTTCCGGGEEECTTCCEEECCCC------------
T ss_pred HHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH----cCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccccccccc
Confidence 9999975332234899999999999999999999 667 999999999999999999999999998653322 2
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
....++..|++||......++.++|||||||++|||+||+.||.... ..+............. .+....
T Consensus 197 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~-~~~~~~~~~~~~~~~~----------~~~~~~ 265 (309)
T 3p86_A 197 KSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN-PAQVVAAVGFKCKRLE----------IPRNLN 265 (309)
T ss_dssp -----CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSC-HHHHHHHHHHSCCCCC----------CCTTSC
T ss_pred ccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhcCCCCC----------CCccCC
Confidence 33467889999999988888999999999999999999999997543 2222222211111111 111223
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
..+.+++.+||+.||++|||++|+++.|+.+...
T Consensus 266 ~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 266 PQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 3588899999999999999999999999998764
No 24
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=7e-42 Score=355.30 Aligned_cols=257 Identities=21% Similarity=0.325 Sum_probs=199.2
Q ss_pred cccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCC----eEEEEEeecCC
Q 006903 350 PAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ----EKLLVYEYQPN 425 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~----~~~lv~Ey~~~ 425 (626)
..+.||+|+||.||+|+.. ++.||||++.........+.+|+.++++++||||+++++++.... ..++||||+++
T Consensus 28 ~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~ 106 (322)
T 3soc_A 28 LLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEK 106 (322)
T ss_dssp EEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred hhheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCC
Confidence 3578999999999999875 789999999765544556778999999999999999999998754 36999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh------ccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEE------LREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN 499 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~------~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~ 499 (626)
|+|.++++. ..++|..+..++.|++.||+|||+. +++++|+||||||+|||++.++.+||+|||+++...
T Consensus 107 g~L~~~l~~----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~ 182 (322)
T 3soc_A 107 GSLSDFLKA----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFE 182 (322)
T ss_dssp CBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEEC
T ss_pred CCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccc
Confidence 999999964 3489999999999999999999932 112299999999999999999999999999986533
Q ss_pred CC-----ccccccccccchhhccccC-----CCCCcchhHHHHHHHHHHHcCCCCCCCCcc---------------hhHH
Q 006903 500 HD-----QSFLAQTSSLKINDISNQM-----CSTIKADVYGFGVILLELLTGKLVQNNGFN---------------LATW 554 (626)
Q Consensus 500 ~~-----~~~~~~~~~~~~pe~~~~~-----~~~~k~DVwSfGvvl~elltg~~p~~~~~~---------------~~~~ 554 (626)
.. .....++..|++||..... .++.++|||||||++|||+||+.||....+ ...+
T Consensus 183 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 262 (322)
T 3soc_A 183 AGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDM 262 (322)
T ss_dssp TTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHH
T ss_pred cccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhh
Confidence 22 1224578899999987652 345688999999999999999999864321 1111
Q ss_pred HHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 555 VHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 555 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.......... .... ...........+.+++.+||+.||++|||+.||++.|+++.+.
T Consensus 263 ~~~~~~~~~~-~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 263 QEVVVHKKKR-PVLR----DYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp HHHHTTSCCC-CCCC----GGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhhhhcccCC-CCcc----ccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 1111111110 0011 1111224456689999999999999999999999999998754
No 25
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.1e-41 Score=340.87 Aligned_cols=248 Identities=20% Similarity=0.303 Sum_probs=206.5
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||+|...+++.||+|++.......+++.+|++++++++||||+++++++.+.+..++||||+++|+|.+
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 94 (269)
T 4hcu_A 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 94 (269)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHH
T ss_pred eheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHH
Confidence 47899999999999998889999999998877778899999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC----ccccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD----QSFLA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~----~~~~~ 506 (626)
++.. ....+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++...... .....
T Consensus 95 ~l~~--~~~~~~~~~~~~i~~~i~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 168 (269)
T 4hcu_A 95 YLRT--QRGLFAAETLLGMCLDVCEGMAYLE----EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 168 (269)
T ss_dssp HHHT--TTTCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTT
T ss_pred HHHh--cCcccCHHHHHHHHHHHHHHHHHHH----hCCeecCCcchheEEEcCCCCEEeccccccccccccccccccCcc
Confidence 9964 2346899999999999999999999 579999999999999999999999999998754322 12233
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
++..|++||......++.++||||||+++|||+| |+.||... ...+............ . +......+
T Consensus 169 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~-~~~~~~~~~~~~~~~~---~--------~~~~~~~~ 236 (269)
T 4hcu_A 169 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR-SNSEVVEDISTGFRLY---K--------PRLASTHV 236 (269)
T ss_dssp CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-CHHHHHHHHHTTCCCC---C--------CTTSCHHH
T ss_pred cccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCC-CHHHHHHHHhcCccCC---C--------CCcCCHHH
Confidence 4567999999888888999999999999999999 88888643 3333333332221110 0 11112347
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 237 ~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 237 YQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 8899999999999999999999999998764
No 26
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.7e-41 Score=357.78 Aligned_cols=251 Identities=18% Similarity=0.277 Sum_probs=202.6
Q ss_pred cccccccCCCcceEEEEe--------CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEE
Q 006903 350 PAELLGRGKHGSLYRVVL--------DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLL 418 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~--------~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~l 418 (626)
..+.||+|+||.||+|.. .++..||||+++.... ..+.+.+|+++++++ +||||+++++++...+..|+
T Consensus 85 ~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 164 (370)
T 2psq_A 85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 164 (370)
T ss_dssp EEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEE
T ss_pred eeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEE
Confidence 357899999999999984 2456899999976542 235789999999999 89999999999999999999
Q ss_pred EEeecCCCChhHhhcCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC
Q 006903 419 VYEYQPNGSLFNLLHGSEN-------------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM 485 (626)
Q Consensus 419 v~Ey~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~ 485 (626)
||||+++|+|.+++..... ...+++..++.++.|++.||.||| +++|+||||||+|||++.++
T Consensus 165 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~~ 240 (370)
T 2psq_A 165 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA----SQKCIHRDLAARNVLVTENN 240 (370)
T ss_dssp EEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEECTTC
T ss_pred EEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH----hCCeeccccchhhEEECCCC
Confidence 9999999999999975321 235899999999999999999999 57999999999999999999
Q ss_pred CeEEeeccCccccCCC-----ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHh
Q 006903 486 EPCISEYGLIVTENHD-----QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVV 559 (626)
Q Consensus 486 ~~kl~DFGl~~~~~~~-----~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~ 559 (626)
.+||+|||+++..... .....++..|++||......++.++|||||||++|||+| |+.||... +..+....+.
T Consensus 241 ~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~-~~~~~~~~~~ 319 (370)
T 2psq_A 241 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEELFKLLK 319 (370)
T ss_dssp CEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-CGGGHHHHHH
T ss_pred CEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHh
Confidence 9999999998754322 122345667999999888889999999999999999999 88888643 3333333322
Q ss_pred hcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 560 REEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 560 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
... ... .+......+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 320 ~~~-~~~----------~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~ 365 (370)
T 2psq_A 320 EGH-RMD----------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 365 (370)
T ss_dssp TTC-CCC----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCC-CCC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 221 111 1112234588899999999999999999999999998653
No 27
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=3e-41 Score=340.61 Aligned_cols=249 Identities=21% Similarity=0.333 Sum_probs=205.1
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||+|...++..||+|+++......+++.+|++++++++||||+++++++...+..++||||+++|+|.+
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 92 (268)
T 3sxs_A 13 LKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLN 92 (268)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHH
T ss_pred eeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHHH
Confidence 47899999999999999888899999998877778899999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc----ccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS----FLA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~----~~~ 506 (626)
++... ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++........ ...
T Consensus 93 ~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~ 166 (268)
T 3sxs_A 93 YLRSH--GKGLEPSQLLEMCYDVCEGMAFLE----SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTK 166 (268)
T ss_dssp HHHHH--GGGCCHHHHHHHHHHHHHHHHHHH----HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCC
T ss_pred HHHHc--CCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCC
Confidence 99642 346899999999999999999999 57999999999999999999999999999875433221 123
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
++..|++||......++.++||||||+++|||+| |+.||..... .+............ . +......+
T Consensus 167 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-~~~~~~~~~~~~~~---~--------~~~~~~~l 234 (268)
T 3sxs_A 167 FPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN-SEVVLKVSQGHRLY---R--------PHLASDTI 234 (268)
T ss_dssp CCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH-HHHHHHHHTTCCCC---C--------CTTSCHHH
T ss_pred cCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh-HHHHHHHHcCCCCC---C--------CCcChHHH
Confidence 4456999999887778999999999999999999 9999864332 22222222221110 0 01112347
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
.+++.+||+.||++|||+.|+++.|+.+++..
T Consensus 235 ~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 235 YQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp HHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 88999999999999999999999999997653
No 28
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=3.8e-41 Score=350.24 Aligned_cols=251 Identities=21% Similarity=0.282 Sum_probs=201.5
Q ss_pred cccccccCCCcceEEEEeC----CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 350 PAELLGRGKHGSLYRVVLD----DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~----~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
..+.||+|+||.||+|... .+..||||+++.... ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 53 i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 132 (325)
T 3kul_A 53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYM 132 (325)
T ss_dssp EEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECC
T ss_pred EeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCC
Confidence 3578999999999999963 355699999976432 2357899999999999999999999999999999999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc-
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ- 502 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~- 502 (626)
++|+|.++++. ....+++..++.++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 133 ~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 206 (325)
T 3kul_A 133 ENGSLDTFLRT--HDGQFTIMQLVGMLRGVGAGMRYLS----DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD 206 (325)
T ss_dssp TTCBHHHHHHT--TTTCSCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----
T ss_pred CCCcHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHH----HCCeeCCCCCcceEEECCCCCEEECCCCcccccccCcc
Confidence 99999999964 2346999999999999999999999 5799999999999999999999999999987543321
Q ss_pred -----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhh
Q 006903 503 -----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEA 576 (626)
Q Consensus 503 -----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 576 (626)
....++..|++||......++.++|||||||++|||++ |+.||.... ..+....+...... .
T Consensus 207 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~-~~~~~~~~~~~~~~-~---------- 274 (325)
T 3kul_A 207 AAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT-NRDVISSVEEGYRL-P---------- 274 (325)
T ss_dssp CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSC-HHHHHHHHHTTCCC-C----------
T ss_pred ceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCC-HHHHHHHHHcCCCC-C----------
Confidence 11223557999999887788999999999999999999 999986432 22333332222111 0
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccc
Q 006903 577 ASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618 (626)
Q Consensus 577 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~ 618 (626)
.+......+.+++.+||+.||++|||+.|+++.|+.+.....
T Consensus 275 ~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 275 APMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred CCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 111223458889999999999999999999999999876544
No 29
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1e-40 Score=342.50 Aligned_cols=240 Identities=20% Similarity=0.327 Sum_probs=198.0
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|. ..+++.||||++.... ...+.+.+|+.++++++||||+++++++...+..++||||+++|+|
T Consensus 25 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (297)
T 3fxz_A 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104 (297)
T ss_dssp CEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred eeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCH
Confidence 4789999999999998 4679999999986544 4567789999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---cccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSFL 505 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~~ 505 (626)
.+++.. ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++...... ....
T Consensus 105 ~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 176 (297)
T 3fxz_A 105 TDVVTE----TCMDEGQIAAVCRECLQALEFLH----SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM 176 (297)
T ss_dssp HHHHHH----SCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCC
T ss_pred HHHHhh----cCCCHHHHHHHHHHHHHHHHHHH----hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCCc
Confidence 999964 25899999999999999999999 579999999999999999999999999998654322 2334
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.++..|++||......++.++|||||||++|||+||+.||.......... ........ ... .+......+
T Consensus 177 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-~~~~~~~~-~~~--------~~~~~~~~~ 246 (297)
T 3fxz_A 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTP-ELQ--------NPEKLSAIF 246 (297)
T ss_dssp CSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HHHHHCSC-CCS--------CGGGSCHHH
T ss_pred cCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhCCCC-CCC--------CccccCHHH
Confidence 67889999999988888999999999999999999999997554333222 22211111 000 011123347
Q ss_pred HHHHhhccCCCCCCCCCHHHHHH
Q 006903 586 LQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+++.+||+.||++|||++|+++
T Consensus 247 ~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 247 RDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHccCChhHCcCHHHHhh
Confidence 88999999999999999999986
No 30
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=4.1e-41 Score=366.18 Aligned_cols=249 Identities=21% Similarity=0.370 Sum_probs=205.4
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||+|...++..||||+++......++|.+|++++++++|||||++++++. .+..++||||+++|+|.+
T Consensus 193 ~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~~ 271 (454)
T 1qcf_A 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLD 271 (454)
T ss_dssp EEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHH
T ss_pred EEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHHH
Confidence 4789999999999999988899999999877777889999999999999999999999875 667899999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc----cccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ----SFLA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~----~~~~ 506 (626)
+++.. ....+++..++.++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++...... ....
T Consensus 272 ~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~ 346 (454)
T 1qcf_A 272 FLKSD-EGSKQPLPKLIDFSAQIAEGMAFIE----QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAK 346 (454)
T ss_dssp HHHSH-HHHTCCHHHHHHHHHHHHHHHHHHH----HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSS
T ss_pred HHHhc-cCCCCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCc
Confidence 99642 1235889999999999999999999 5799999999999999999999999999987643221 1223
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
++..|++||......++.++|||||||++|||+| |+.||... +..+....+...... . .+..++..+
T Consensus 347 ~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~-~~~~~~~~i~~~~~~-~----------~~~~~~~~l 414 (454)
T 1qcf_A 347 FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM-SNPEVIRALERGYRM-P----------RPENCPEEL 414 (454)
T ss_dssp SCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-CHHHHHHHHHHTCCC-C----------CCTTSCHHH
T ss_pred ccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHcCCCC-C----------CCCCCCHHH
Confidence 4567999999888889999999999999999999 99998643 333333333222111 0 111233458
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
.+++.+||+.||++|||+++|++.|+.+....
T Consensus 415 ~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 415 YNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred HHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 89999999999999999999999999987543
No 31
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=6e-41 Score=364.37 Aligned_cols=247 Identities=19% Similarity=0.320 Sum_probs=201.6
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCC-eEEEEEeecCCCChh
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ-EKLLVYEYQPNGSLF 429 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~-~~~lv~Ey~~~g~L~ 429 (626)
.+.||+|+||.||+|... |+.||||.++... ..+.|.+|++++++++||||+++++++...+ ..++||||+++|+|.
T Consensus 198 ~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~ 275 (450)
T 1k9a_A 198 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 275 (450)
T ss_dssp EEEEEECSSEEEEEEEET-TEEEEEEEESSCT-TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHH
T ss_pred EeeecCcCCeeEEEEEec-CCeEEEEEeCCch-HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHH
Confidence 478999999999999975 7899999998644 5578999999999999999999999987765 789999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcccccccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTS 509 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~~~~~ 509 (626)
++++.. ....+++..++.++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++..........++.
T Consensus 276 ~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 350 (450)
T 1k9a_A 276 DYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLE----GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 350 (450)
T ss_dssp HHHHHH-CTTTCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC------CCCT
T ss_pred HHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCCCCc
Confidence 999742 2235799999999999999999999 57999999999999999999999999999876544333345677
Q ss_pred ccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHH
Q 006903 510 SLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQV 588 (626)
Q Consensus 510 ~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l 588 (626)
.|++||......++.++|||||||++|||+| |+.||... +..+....+.... ... .+..+...+.++
T Consensus 351 ~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~-~~~~~~~~i~~~~-~~~----------~p~~~~~~l~~l 418 (450)
T 1k9a_A 351 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-PLKDVVPRVEKGY-KMD----------APDGCPPAVYDV 418 (450)
T ss_dssp TTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTS-CTTTHHHHHHTTC-CCC----------CCTTCCHHHHHH
T ss_pred ceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHcCC-CCC----------CCCcCCHHHHHH
Confidence 8999999988889999999999999999999 99998643 2223333322221 111 112233458899
Q ss_pred HhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 589 ALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 589 ~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
+.+||+.||++|||+.++++.|+.+...
T Consensus 419 i~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 419 MKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999998754
No 32
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.1e-41 Score=361.84 Aligned_cols=248 Identities=20% Similarity=0.293 Sum_probs=200.9
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|... +++.||||.++.... ..++|.+|++++++++||||+++++++..++..++||||+++|+
T Consensus 119 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 198 (377)
T 3cbl_A 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD 198 (377)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCB
T ss_pred eeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCC
Confidence 578999999999999965 789999999975432 12468899999999999999999999999899999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc----
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS---- 503 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~---- 503 (626)
|.++++. .+..+++..++.++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.......
T Consensus 199 L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~ 272 (377)
T 3cbl_A 199 FLTFLRT--EGARLRVKTLLQMVGDAAAGMEYLE----SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASG 272 (377)
T ss_dssp HHHHHHH--HGGGCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCS
T ss_pred HHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH----HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecC
Confidence 9999963 2346899999999999999999999 57999999999999999999999999999875433211
Q ss_pred -ccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 504 -FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 504 -~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
...++..|++||......++.++|||||||++|||+| |+.||.... ..+....+.... ... .+..+
T Consensus 273 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~-~~~~~~~~~~~~-~~~----------~~~~~ 340 (377)
T 3cbl_A 273 GLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS-NQQTREFVEKGG-RLP----------CPELC 340 (377)
T ss_dssp SCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC-HHHHHHHHHTTC-CCC----------CCTTC
T ss_pred CCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHcCC-CCC----------CCCCC
Confidence 1223557999999887778999999999999999999 888886432 222222222111 111 11122
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
+..+.+++.+||+.||++|||++++++.|++++..
T Consensus 341 ~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 341 PDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 34588899999999999999999999999998754
No 33
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1e-40 Score=339.50 Aligned_cols=248 Identities=18% Similarity=0.271 Sum_probs=203.0
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||++...++..||||+++......+++.+|++++++++||||+++++++.+.+..++||||+++|+|.+
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 108 (283)
T 3gen_A 29 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 108 (283)
T ss_dssp EEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHHH
T ss_pred HhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHHH
Confidence 47899999999999999888899999998877778899999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc----cccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ----SFLA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~----~~~~ 506 (626)
++... ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++....... ....
T Consensus 109 ~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 182 (283)
T 3gen_A 109 YLREM--RHRFQTQQLLEMCKDVCEAMEYLE----SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 182 (283)
T ss_dssp HHHCG--GGCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTT
T ss_pred HHHHh--ccCCCHHHHHHHHHHHHHHHHHHH----HCCccCCCCccceEEEcCCCCEEEccccccccccccccccccCCc
Confidence 99642 346999999999999999999999 5799999999999999999999999999986543221 1223
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
++..|++||......++.++||||||+++|||+| |+.||.... ..+....+....... . +......+
T Consensus 183 ~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~-~~~~~~~~~~~~~~~---~--------~~~~~~~l 250 (283)
T 3gen_A 183 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT-NSETAEHIAQGLRLY---R--------PHLASEKV 250 (283)
T ss_dssp SCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC-HHHHHHHHHTTCCCC---C--------CTTCCHHH
T ss_pred cCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccC-hhHHHHHHhcccCCC---C--------CCcCCHHH
Confidence 4567999999888888999999999999999999 999987433 223333322221110 0 01112357
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.+++.+||+.||++|||++|+++.|+++.++
T Consensus 251 ~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 251 YTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp HHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 8899999999999999999999999998754
No 34
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=4.2e-41 Score=356.59 Aligned_cols=249 Identities=20% Similarity=0.301 Sum_probs=193.3
Q ss_pred cccccccCCCcceEEEEeC----CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 350 PAELLGRGKHGSLYRVVLD----DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~----~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
..+.||+|+||.||+|+.. ++..||||+++.... ..++|.+|++++++++||||+++++++...+..++||||+
T Consensus 49 ~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 128 (373)
T 2qol_A 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128 (373)
T ss_dssp CCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred eeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCC
Confidence 3578999999999999854 578899999976432 2357999999999999999999999999999999999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS 503 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~ 503 (626)
++|+|.++++. ....+++..++.++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++.......
T Consensus 129 ~~~sL~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 202 (373)
T 2qol_A 129 ENGSLDSFLRK--HDAQFTVIQLVGMLRGIASGMKYLS----DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPE 202 (373)
T ss_dssp TTCBHHHHHHT--TTTCSCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred CCCcHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCc
Confidence 99999999974 3356999999999999999999999 57999999999999999999999999999875432211
Q ss_pred ------ccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhh
Q 006903 504 ------FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEA 576 (626)
Q Consensus 504 ------~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 576 (626)
...++..|++||......++.++|||||||++|||++ |+.||... +..+....+.... ...
T Consensus 203 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~-~~~~~~~~i~~~~-~~~---------- 270 (373)
T 2qol_A 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM-SNQDVIKAVDEGY-RLP---------- 270 (373)
T ss_dssp -----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTC-CHHHHHHHHHTTE-ECC----------
T ss_pred cceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHcCC-CCC----------
Confidence 1123457999999888889999999999999999998 99998643 2233333222211 100
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 577 ASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 577 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
........+.+++.+||+.||++||++.||++.|+++...
T Consensus 271 ~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 271 PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp CCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 1112234588999999999999999999999999998654
No 35
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2e-40 Score=341.46 Aligned_cols=256 Identities=25% Similarity=0.450 Sum_probs=203.9
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCC-----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWS-----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~-----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
+.||+|+||.||+|.. +++.||||++.... ...+.+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 37 ~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 115 (307)
T 2nru_A 37 NKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNG 115 (307)
T ss_dssp CEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred CccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCC
Confidence 6799999999999987 58899999987532 12467899999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC-----
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD----- 501 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~----- 501 (626)
+|.+++........+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 116 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH----~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 191 (307)
T 2nru_A 116 SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH----ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191 (307)
T ss_dssp BHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEE
T ss_pred cHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh----cCCeecCCCCHHHEEEcCCCcEEEeeccccccccccccccc
Confidence 99999975444567999999999999999999999 579999999999999999999999999998654321
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcc---hhHHHHHHhhccc-ccccccHHHHhhhc
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFN---LATWVHSVVREEW-TVEVFDEVLIAEAA 577 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~---~~~~~~~~~~~~~-~~~~~d~~~~~~~~ 577 (626)
.....++..|++||.... .++.++||||||+++|||+||+.||..... ...+......... ..+.++..+ ...
T Consensus 192 ~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 268 (307)
T 2nru_A 192 TSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM--NDA 268 (307)
T ss_dssp CSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSC--SCC
T ss_pred ccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccc--ccc
Confidence 122457888999998764 368899999999999999999999874322 1222222211111 011111111 113
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhh
Q 006903 578 SEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKE 615 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~ 615 (626)
.......+.+++.+||+.||++|||+.++++.|+++..
T Consensus 269 ~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 269 DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp CHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred chHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 34566779999999999999999999999999998864
No 36
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.2e-40 Score=341.57 Aligned_cols=250 Identities=20% Similarity=0.325 Sum_probs=193.7
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||+|... ++.||||++... ...+.+.+|++++++++||||+++++++. +..++||||+++|+|.+
T Consensus 13 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~~ 88 (307)
T 2eva_A 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESE-SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYN 88 (307)
T ss_dssp EEEEECCSSSEEEEEEET-TEEEEEEECSST-THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBHHH
T ss_pred eeEeecCCCceEEEEEEC-CeeEEEEEecCh-hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCHHH
Confidence 478999999999999975 788999998643 34567999999999999999999999876 45899999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC-eEEeeccCccccCCCcccccccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME-PCISEYGLIVTENHDQSFLAQTS 509 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~-~kl~DFGl~~~~~~~~~~~~~~~ 509 (626)
++........+++..++.++.|+++||.|||+. +.++|+||||||+|||++.++. +||+|||++...........++.
T Consensus 89 ~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~ 167 (307)
T 2eva_A 89 VLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM-QPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSA 167 (307)
T ss_dssp HHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTC-SSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------CCT
T ss_pred HHhccCCCCccCHHHHHHHHHHHHHHHHHHHhC-CCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccccCCCCC
Confidence 997544334688999999999999999999942 1278999999999999998887 79999999876544444456788
Q ss_pred ccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcc-hhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHH
Q 006903 510 SLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFN-LATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQV 588 (626)
Q Consensus 510 ~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l 588 (626)
.|++||......++.++|||||||++|||+||+.||..... ............ .... .......+.++
T Consensus 168 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~----------~~~~~~~l~~l 236 (307)
T 2eva_A 168 AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGT-RPPL----------IKNLPKPIESL 236 (307)
T ss_dssp TSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTC-CCCC----------BTTCCHHHHHH
T ss_pred ceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCC-CCCc----------ccccCHHHHHH
Confidence 99999999888889999999999999999999999974322 111111111111 1111 11123357889
Q ss_pred HhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 589 ALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 589 ~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
+.+||+.||++|||++|+++.|+.+...
T Consensus 237 i~~~l~~dp~~Rps~~ell~~L~~~~~~ 264 (307)
T 2eva_A 237 MTRCWSKDPSQRPSMEEIVKIMTHLMRY 264 (307)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHGGG
T ss_pred HHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999988654
No 37
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=8.9e-41 Score=347.75 Aligned_cols=239 Identities=18% Similarity=0.273 Sum_probs=198.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|+++++.++||||+++++++.+.+..++||||+++|
T Consensus 20 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~ 99 (328)
T 3fe3_A 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGG 99 (328)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCC
Confidence 47899999999999995 67999999999765433 346889999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC--Cccc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH--DQSF 504 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~--~~~~ 504 (626)
+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++..... ....
T Consensus 100 ~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~lH----~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 172 (328)
T 3fe3_A 100 EVFDYLVA---HGRMKEKEARSKFRQIVSAVQYCH----QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA 172 (328)
T ss_dssp BHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGT
T ss_pred cHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcccc
Confidence 99999963 246899999999999999999999 57999999999999999999999999999865432 2234
Q ss_pred cccccccchhhccccCCC-CCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 505 LAQTSSLKINDISNQMCS-TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~-~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
..+++.|++||......+ +.++|||||||++|||+||+.||... +..+....+........ .....
T Consensus 173 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~-~~~~~~~~i~~~~~~~p------------~~~s~ 239 (328)
T 3fe3_A 173 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ-NLKELRERVLRGKYRIP------------FYMST 239 (328)
T ss_dssp TSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCCC------------TTSCH
T ss_pred ccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCC-CHHHHHHHHHhCCCCCC------------CCCCH
Confidence 568889999999877665 47999999999999999999999743 44444444443322111 11123
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 584 KLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
.+.+++.+||+.||++|||++|+++.
T Consensus 240 ~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 240 DCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp HHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred HHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 47789999999999999999999763
No 38
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=9.1e-41 Score=367.13 Aligned_cols=250 Identities=23% Similarity=0.337 Sum_probs=205.9
Q ss_pred cccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 350 PAELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
..+.||+|+||.||+|... ++..||||.++......++|.+|++++++++|||||++++++...+..++||||+++|+|
T Consensus 224 ~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L 303 (495)
T 1opk_A 224 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 303 (495)
T ss_dssp EEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred eeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCH
Confidence 3578999999999999965 488999999987777788999999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc----cc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ----SF 504 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~----~~ 504 (626)
.++++.. ....+++..++.++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 304 ~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~ 378 (495)
T 1opk_A 304 LDYLREC-NRQEVSAVVLLYMATQISSAMEYLE----KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 378 (495)
T ss_dssp HHHHHHS-CTTTSCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTT
T ss_pred HHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCChhhEEECCCCcEEEeecccceeccCCceeecCC
Confidence 9999743 2356899999999999999999999 5799999999999999999999999999987643322 11
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
..++..|++||......++.++|||||||++|||+| |+.||... +..+....+... .... .+..+..
T Consensus 379 ~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~-~~~~~~~~~~~~-~~~~----------~~~~~~~ 446 (495)
T 1opk_A 379 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKD-YRME----------RPEGCPE 446 (495)
T ss_dssp CCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC-CGGGHHHHHHTT-CCCC----------CCTTCCH
T ss_pred CcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHcC-CCCC----------CCCCCCH
Confidence 234567999999887788999999999999999999 88888643 333333222221 1111 1112234
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 584 KLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.+.+++.+||+.||++|||+.+|++.|+.+...
T Consensus 447 ~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 447 KVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred HHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 588899999999999999999999999988643
No 39
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=4.8e-40 Score=335.22 Aligned_cols=245 Identities=22% Similarity=0.360 Sum_probs=197.2
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC--H------HHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS--S------EDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~--~------~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~E 421 (626)
.+.||+|+||.||+|.. .+++.||||++...... . +.+.+|++++++++||||+++++++.+.. ++|||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e 101 (287)
T 4f0f_A 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVME 101 (287)
T ss_dssp EEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEEE
T ss_pred hhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEEE
Confidence 47899999999999995 57899999998754421 1 57899999999999999999999886554 79999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCC--ceeccCCCCCeeeCCCCC-----eEEeeccC
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDG--IAHGNLKSNNILFNNNME-----PCISEYGL 494 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~--ivHrDlkp~NILl~~~~~-----~kl~DFGl 494 (626)
|+++|+|.+++.. ....+++..++.++.|++.||+||| +.+ |+||||||+|||++.++. +||+|||+
T Consensus 102 ~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~l~~~l~~lH----~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~ 175 (287)
T 4f0f_A 102 FVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIALGIEYMQ----NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL 175 (287)
T ss_dssp CCTTCBHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHH----TSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTT
T ss_pred ecCCCCHHHHHhc--ccCCccHHHHHHHHHHHHHHHHHHH----hCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCc
Confidence 9999999998864 3457999999999999999999999 567 999999999999988776 99999999
Q ss_pred ccccCCCccccccccccchhhcc--ccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcch-hHHHHHHhhcccccccccHH
Q 006903 495 IVTENHDQSFLAQTSSLKINDIS--NQMCSTIKADVYGFGVILLELLTGKLVQNNGFNL-ATWVHSVVREEWTVEVFDEV 571 (626)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~pe~~--~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~d~~ 571 (626)
++..........++..|++||.. ....++.++|||||||++|||++|+.||...... ...............
T Consensus 176 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~----- 250 (287)
T 4f0f_A 176 SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPT----- 250 (287)
T ss_dssp CBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCC-----
T ss_pred cccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCC-----
Confidence 98665555556788899999987 3445688999999999999999999999743221 122222222221111
Q ss_pred HHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 572 LIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 572 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
........+.+++.+||+.||++|||++|+++.|+++
T Consensus 251 -----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 251 -----IPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp -----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred -----CCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 1112234588999999999999999999999999864
No 40
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=348.14 Aligned_cols=239 Identities=19% Similarity=0.320 Sum_probs=192.6
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++++++||||+++++++.+.+..++||||+++|+
T Consensus 15 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~ 94 (347)
T 3zgw_A 15 HETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGE 94 (347)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCB
T ss_pred EEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCCCCC
Confidence 47899999999999984 6799999999876542 33578999999999999999999999999999999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC----cc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD----QS 503 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~----~~ 503 (626)
|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||+++++.+||+|||++...... ..
T Consensus 95 L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH----~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~ 167 (347)
T 3zgw_A 95 LFDYIIS---QDRLSEEETRVVFRQIVSAVAYVH----SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQ 167 (347)
T ss_dssp HHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC----------
T ss_pred HHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCcccc
Confidence 9999963 246899999999999999999999 579999999999999999999999999998653322 23
Q ss_pred ccccccccchhhccccCCC-CCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 504 FLAQTSSLKINDISNQMCS-TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~-~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
...+++.|++||......+ +.++|||||||++|||++|+.||... +..+....+....... +....
T Consensus 168 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~-~~~~~~~~i~~~~~~~------------p~~~s 234 (347)
T 3zgw_A 168 TCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDD-NVMALYKKIMRGKYDV------------PKWLS 234 (347)
T ss_dssp ----CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHTCCCC------------CTTCC
T ss_pred ccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHcCCCCC------------CCCCC
Confidence 3467889999999876664 88999999999999999999999753 3444444444332211 01112
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
..+.+++.+||+.||++|||++|+++.
T Consensus 235 ~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 235 PSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred HHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 347789999999999999999999873
No 41
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-40 Score=344.96 Aligned_cols=243 Identities=17% Similarity=0.264 Sum_probs=200.3
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
.+.||+|+||.||+|.. .+++.||+|.+.......+.+.+|+++++.++||||+++++++.+.+..++||||+++|+|.
T Consensus 10 ~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~ 89 (321)
T 1tki_A 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIF 89 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHH
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHH
Confidence 47899999999999985 46899999999765555567899999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC--CCCeEEeeccCccccCCCc--ccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN--NMEPCISEYGLIVTENHDQ--SFL 505 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~--~~~~kl~DFGl~~~~~~~~--~~~ 505 (626)
+++.. ....+++..+..++.|++.||.||| +.||+||||||+|||++. ++.+||+|||++....... ...
T Consensus 90 ~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH----~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 163 (321)
T 1tki_A 90 ERINT--SAFELNEREIVSYVHQVCEALQFLH----SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLL 163 (321)
T ss_dssp HHHTS--SSCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEE
T ss_pred HHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH----HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccccc
Confidence 99963 2346899999999999999999999 579999999999999997 7899999999987643322 334
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.+++.|++||......++.++|||||||++|||++|+.||.... ..+....+....... +.... ......+
T Consensus 164 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~~i~~~~~~~---~~~~~-----~~~s~~~ 234 (321)
T 1tki_A 164 FTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET-NQQIIENIMNAEYTF---DEEAF-----KEISIEA 234 (321)
T ss_dssp ESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS-HHHHHHHHHHTCCCC---CHHHH-----TTSCHHH
T ss_pred cCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCC-HHHHHHHHHcCCCCC---Chhhh-----ccCCHHH
Confidence 67889999999887778999999999999999999999997543 333444443332211 11110 1123357
Q ss_pred HHHHhhccCCCCCCCCCHHHHHH
Q 006903 586 LQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+++.+||+.||++|||+.|+++
T Consensus 235 ~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 235 MDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHcCCChhHCcCHHHHhc
Confidence 89999999999999999999987
No 42
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=4.2e-40 Score=339.62 Aligned_cols=250 Identities=21% Similarity=0.350 Sum_probs=197.0
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCH---HHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~---~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|... ..+|+|.++...... +.+.+|++++++++||||+++++++. .+..++||||+++|+
T Consensus 41 ~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~~ 117 (307)
T 3lb7_A 41 STRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSS 117 (307)
T ss_dssp EEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSCB
T ss_pred EeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEecCCCCc
Confidence 478999999999999864 358999987654433 56889999999999999999999764 566899999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC-----Cc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH-----DQ 502 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~-----~~ 502 (626)
|.+++.. ....+++..++.++.|++.||+||| +.+|+||||||+|||+++++.+||+|||++..... ..
T Consensus 118 L~~~l~~--~~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~ 191 (307)
T 3lb7_A 118 LYKHLHV--QETKFQMFQLIDIARQTAQGMDYLH----AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQV 191 (307)
T ss_dssp HHHHHHT--SCCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC----------
T ss_pred HHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHH----hCCEeeCCCChhhEEEcCCCCEEEccCCCceecccccccccc
Confidence 9999974 3457999999999999999999999 57999999999999999999999999999864321 12
Q ss_pred cccccccccchhhccc---cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccH
Q 006903 503 SFLAQTSSLKINDISN---QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASE 579 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~---~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 579 (626)
....++..|++||... ...++.++|||||||++|||+||+.||...................... . ....
T Consensus 192 ~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~-~------~~~~ 264 (307)
T 3lb7_A 192 EQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDL-S------KLYK 264 (307)
T ss_dssp --CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCS-T------TSCS
T ss_pred cCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcch-h------hhhc
Confidence 2346788999999875 5567889999999999999999999997554433333222222111110 0 0111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 580 ERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 580 ~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.+...+.+++.+||+.||++||++.|+++.|+.+...
T Consensus 265 ~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~ 301 (307)
T 3lb7_A 265 NCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp SSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred CCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence 2234588899999999999999999999999988754
No 43
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.1e-40 Score=342.17 Aligned_cols=252 Identities=24% Similarity=0.336 Sum_probs=192.1
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhcc--CCCCCccccceEEEeC----CeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDH--VKHPNVLPPLAYYCSK----QEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~--l~H~nIv~l~g~~~~~----~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|+. +++.||||++... ..+.+.+|.+++.. ++||||+++++++... ...++||||++
T Consensus 13 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~ 89 (301)
T 3q4u_A 13 LECVGKGRYGEVWRGSW-QGENVAVKIFSSR--DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHE 89 (301)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCT
T ss_pred EEeeccCCCcEEEEEEE-CCEEEEEEEeccc--cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhcc
Confidence 47899999999999987 6899999998653 34456666666555 8999999999987653 45799999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhc----cCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEEL----REDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~----~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
+|+|.++++. ..+++..++.++.|++.||+|||... ++++|+||||||+|||++.++.+||+|||+++....
T Consensus 90 ~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 165 (301)
T 3q4u_A 90 MGSLYDYLQL----TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ 165 (301)
T ss_dssp TCBHHHHHTT----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEET
T ss_pred CCCHHHHHhh----cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeeccc
Confidence 9999999952 46899999999999999999999321 146899999999999999999999999999865322
Q ss_pred Cc-------cccccccccchhhccccC------CCCCcchhHHHHHHHHHHHcC----------CCCCCCCcc---hhHH
Q 006903 501 DQ-------SFLAQTSSLKINDISNQM------CSTIKADVYGFGVILLELLTG----------KLVQNNGFN---LATW 554 (626)
Q Consensus 501 ~~-------~~~~~~~~~~~pe~~~~~------~~~~k~DVwSfGvvl~elltg----------~~p~~~~~~---~~~~ 554 (626)
.. ....++..|++||..... .++.++|||||||++|||+|| +.||..... ....
T Consensus 166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~ 245 (301)
T 3q4u_A 166 STNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFED 245 (301)
T ss_dssp TTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHH
T ss_pred ccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhh
Confidence 21 123678899999987665 334689999999999999999 777753221 1112
Q ss_pred HHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 555 VHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 555 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
.............. ............+.+++.+||+.||++|||+.||++.|+++
T Consensus 246 ~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 246 MRKVVCVDQQRPNI----PNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp HHHHHTTSCCCCCC----CGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred hhHHHhccCCCCCC----ChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 22222111111111 11112334566799999999999999999999999999976
No 44
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.3e-40 Score=361.82 Aligned_cols=249 Identities=22% Similarity=0.340 Sum_probs=201.9
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||+|...++..||||+++......++|.+|++++++++||||+++++++.. +..++||||+++|+|.+
T Consensus 189 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~ 267 (452)
T 1fmk_A 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLD 267 (452)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHHH
T ss_pred eeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHHH
Confidence 47899999999999999888889999998776777899999999999999999999998765 67899999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc----cccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ----SFLA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~----~~~~ 506 (626)
+++.. ....+++..++.++.|++.||+||| +++|+||||||+|||+++++.+||+|||+++...... ....
T Consensus 268 ~l~~~-~~~~~~~~~~~~i~~qi~~~l~~LH----~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~ 342 (452)
T 1fmk_A 268 FLKGE-TGKYLRLPQLVDMAAQIASGMAYVE----RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 342 (452)
T ss_dssp HHSHH-HHTTCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------------
T ss_pred HHHhc-CCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCc
Confidence 99631 2246899999999999999999999 5799999999999999999999999999987543221 1223
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
++..|++||......++.++|||||||++|||+| |+.||... ...+....+.... ... .+..++..+
T Consensus 343 ~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~-~~~~~~~~i~~~~-~~~----------~~~~~~~~l 410 (452)
T 1fmk_A 343 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGY-RMP----------CPPECPESL 410 (452)
T ss_dssp CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC-CHHHHHHHHHTTC-CCC----------CCTTSCHHH
T ss_pred ccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHcCC-CCC----------CCCCCCHHH
Confidence 4567999999888888999999999999999999 88888643 3333333332221 111 112233458
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
.+++.+||+.||++|||++++++.|+.+....
T Consensus 411 ~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 411 HDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 88999999999999999999999999987543
No 45
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.7e-40 Score=332.15 Aligned_cols=248 Identities=20% Similarity=0.289 Sum_probs=205.9
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||+|...+++.||+|++.......+++.+|++++++++||||+++++++...+..++||||+++|+|.+
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 92 (267)
T 3t9t_A 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSD 92 (267)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHH
T ss_pred eeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHH
Confidence 47899999999999998888999999998877777899999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC----ccccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD----QSFLA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~----~~~~~ 506 (626)
++... ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++...... .....
T Consensus 93 ~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 166 (267)
T 3t9t_A 93 YLRTQ--RGLFAAETLLGMCLDVCEGMAYLE----EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 166 (267)
T ss_dssp HHHHT--TTCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTT
T ss_pred HHhhC--cccCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCchheEEECCCCCEEEccccccccccccccccccccc
Confidence 99742 346899999999999999999999 579999999999999999999999999998654321 12233
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
++..|++||......++.++||||||+++|||+| |+.||... ...+....+...... . .+......+
T Consensus 167 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~-~~~~~~~~i~~~~~~-~----------~~~~~~~~l 234 (267)
T 3t9t_A 167 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR-SNSEVVEDISTGFRL-Y----------KPRLASTHV 234 (267)
T ss_dssp CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-CHHHHHHHHHTTCCC-C----------CCTTSCHHH
T ss_pred ccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCC-CHHHHHHHHhcCCcC-C----------CCccCcHHH
Confidence 4567999999887888999999999999999999 88888643 333333333222110 0 011122357
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.+++.+||+.||++|||+.|+++.|+++.++
T Consensus 235 ~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 235 YQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 8899999999999999999999999998753
No 46
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-40 Score=347.49 Aligned_cols=254 Identities=21% Similarity=0.295 Sum_probs=202.1
Q ss_pred ccccccCCCcceEEEEeC------CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVLD------DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
.+.||+|+||.||+|+.. +++.||||.++.... ..+.+.+|++++++++||||+++++++...+..++||||
T Consensus 52 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 131 (343)
T 1luf_A 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEY 131 (343)
T ss_dssp EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEec
Confidence 478999999999999863 458999999976542 235789999999999999999999999999999999999
Q ss_pred cCCCChhHhhcCCCC---------------------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee
Q 006903 423 QPNGSLFNLLHGSEN---------------------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF 481 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl 481 (626)
+++|+|.+++..... ...+++..++.++.|++.||.||| +.+|+||||||+|||+
T Consensus 132 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH----~~~ivH~Dlkp~NIl~ 207 (343)
T 1luf_A 132 MAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS----ERKFVHRDLATRNCLV 207 (343)
T ss_dssp CTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEE
T ss_pred CCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCcceEEE
Confidence 999999999975321 256899999999999999999999 5799999999999999
Q ss_pred CCCCCeEEeeccCccccCCC-----ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHH
Q 006903 482 NNNMEPCISEYGLIVTENHD-----QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWV 555 (626)
Q Consensus 482 ~~~~~~kl~DFGl~~~~~~~-----~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~ 555 (626)
+.++.+||+|||++...... .....++..|++||......++.++|||||||++|||+| |+.||... ...+..
T Consensus 208 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~-~~~~~~ 286 (343)
T 1luf_A 208 GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM-AHEEVI 286 (343)
T ss_dssp CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS-CHHHHH
T ss_pred CCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC-ChHHHH
Confidence 99999999999998643221 122345677999999888888999999999999999999 99898643 333333
Q ss_pred HHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccccc
Q 006903 556 HSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEERS 620 (626)
Q Consensus 556 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~~~ 620 (626)
..+...... . .+......+.+++.+||+.||++|||+.|+++.|+++.+.....
T Consensus 287 ~~~~~~~~~-~----------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~~~ 340 (343)
T 1luf_A 287 YYVRDGNIL-A----------CPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAEGT 340 (343)
T ss_dssp HHHHTTCCC-C----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-----
T ss_pred HHHhCCCcC-C----------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhhhh
Confidence 333222111 1 11122345888999999999999999999999999998765443
No 47
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=9.7e-40 Score=339.04 Aligned_cols=241 Identities=18% Similarity=0.255 Sum_probs=198.1
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|+.++++++||||+++++++...+..++||||+++|+|
T Consensus 50 ~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 129 (321)
T 2c30_A 50 YVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGAL 129 (321)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBH
T ss_pred cEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCH
Confidence 468999999999999965 79999999997654 3456799999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---cccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSFL 505 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~~ 505 (626)
.+++.. ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++...... ....
T Consensus 130 ~~~l~~----~~l~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 201 (321)
T 2c30_A 130 TDIVSQ----VRLNEEQIATVCEAVLQALAYLH----AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSL 201 (321)
T ss_dssp HHHHTT----CCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCC
T ss_pred HHHHHh----cCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccc
Confidence 999853 35899999999999999999999 579999999999999999999999999998654322 2334
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.++..|++||......++.++|||||||++|||+||+.||..... .+....+...... .... .......+
T Consensus 202 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~-~~~~~~~~~~~~~-~~~~--------~~~~~~~l 271 (321)
T 2c30_A 202 VGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP-VQAMKRLRDSPPP-KLKN--------SHKVSPVL 271 (321)
T ss_dssp CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-HHHHHHHHHSSCC-CCTT--------GGGSCHHH
T ss_pred cCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHhcCCCC-CcCc--------cccCCHHH
Confidence 678899999999888889999999999999999999999975432 2222222221110 0000 01122347
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHH
Q 006903 586 LQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
.+++.+||+.||++|||+.|+++.
T Consensus 272 ~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 272 RDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHccCChhhCcCHHHHhcC
Confidence 889999999999999999999874
No 48
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.1e-40 Score=338.37 Aligned_cols=252 Identities=16% Similarity=0.240 Sum_probs=200.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC----HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS----SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~----~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|.. .+++.||+|.+...... .+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 95 (294)
T 4eqm_A 16 VDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEG 95 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCC
Confidence 47899999999999984 56899999998654322 25688999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC----
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---- 501 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---- 501 (626)
|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++......
T Consensus 96 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 168 (294)
T 4eqm_A 96 PTLSEYIES---HGPLSVDTAINFTNQILDGIKHAH----DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ 168 (294)
T ss_dssp CBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-------
T ss_pred CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccccc
Confidence 999999963 246899999999999999999999 579999999999999999999999999998754322
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
.....++..|++||......++.++|||||||++|||+||+.||.......... ........ .. . .......
T Consensus 169 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~-~~~~~~~~-~~-~-----~~~~~~~ 240 (294)
T 4eqm_A 169 TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAI-KHIQDSVP-NV-T-----TDVRKDI 240 (294)
T ss_dssp ------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHH-HHHSSCCC-CH-H-----HHSCTTS
T ss_pred cCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHhhccCC-Cc-c-----hhcccCC
Confidence 123457889999999888888999999999999999999999997544332222 22221111 00 0 0111223
Q ss_pred HHHHHHHHhhccCCCCCCCC-CHHHHHHHHHhhhhcc
Q 006903 582 MLKLLQVALRCINQSPNERP-SMNQVAVMINNIKEEE 617 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RP-s~~ev~~~L~~i~~~~ 617 (626)
+..+.+++.+||+.||++|| +++++.+.|+.+..+.
T Consensus 241 ~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 241 PQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp CHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred CHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 34588899999999999998 9999999999886543
No 49
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=6.7e-40 Score=345.44 Aligned_cols=243 Identities=19% Similarity=0.275 Sum_probs=199.3
Q ss_pred cccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC-------CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEe
Q 006903 350 PAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI-------SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYE 421 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~-------~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~E 421 (626)
..+.||+|+||.||+|.. .+|+.||+|.++.... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 16 ~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e 95 (361)
T 2yab_A 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILE 95 (361)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred EeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEE
Confidence 357899999999999995 4699999999975432 24689999999999999999999999999999999999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC----CeEEeeccCccc
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM----EPCISEYGLIVT 497 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGl~~~ 497 (626)
|+++|+|.+++.. ...+++..+..++.||+.||.||| +.||+||||||+|||+++++ .+||+|||++..
T Consensus 96 ~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH----~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~ 168 (361)
T 2yab_A 96 LVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (361)
T ss_dssp CCCSCBHHHHHTT---CSCCBHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEE
T ss_pred cCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceE
Confidence 9999999999953 357999999999999999999999 57999999999999998877 799999999875
Q ss_pred cCCC--ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhh
Q 006903 498 ENHD--QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 498 ~~~~--~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
.... .....+++.|++||......++.++|||||||++|||++|+.||... +..+....+...... +++...
T Consensus 169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~-~~~~~~~~i~~~~~~---~~~~~~-- 242 (361)
T 2yab_A 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD-TKQETLANITAVSYD---FDEEFF-- 242 (361)
T ss_dssp CCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS-SHHHHHHHHHTTCCC---CCHHHH--
T ss_pred cCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhcCCC---CCchhc--
Confidence 4332 23456889999999998888999999999999999999999999754 333333333332211 111111
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 576 AASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
......+.+++.+||+.||++|||+.|+++
T Consensus 243 ---~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 243 ---SQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp ---TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---cCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 112234788999999999999999999975
No 50
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=7e-40 Score=342.12 Aligned_cols=239 Identities=18% Similarity=0.252 Sum_probs=198.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCC----CCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDW----SISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~----~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|+. .+|+.||+|+++.. ....+.+.+|+++++.++||||+++++++.+.+..++||||+++
T Consensus 10 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~g 89 (337)
T 1o6l_A 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG 89 (337)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 47899999999999995 46999999999753 23456789999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC---CCc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN---HDQ 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~---~~~ 502 (626)
|+|.+++.. ...+++..+..++.||+.||.||| +++|+||||||+|||++.++.+||+|||+++... ...
T Consensus 90 g~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 162 (337)
T 1o6l_A 90 GELFFHLSR---ERVFTEERARFYGAEIVSALEYLH----SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM 162 (337)
T ss_dssp CBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCB
T ss_pred CcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCcc
Confidence 999999963 346899999999999999999999 5799999999999999999999999999987532 222
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
....+++.|++||+.....++.++|||||||++|||++|+.||... +..+....+....... +....
T Consensus 163 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~-~~~~~~~~i~~~~~~~------------p~~~s 229 (337)
T 1o6l_A 163 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-DHERLFELILMEEIRF------------PRTLS 229 (337)
T ss_dssp CCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCC------------CTTSC
T ss_pred cccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCC-CHHHHHHHHHcCCCCC------------CCCCC
Confidence 3456889999999998888899999999999999999999999753 3333333333322110 11122
Q ss_pred HHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERP-----SMNQVAVM 609 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RP-----s~~ev~~~ 609 (626)
..+.+++.+||+.||++|| +++|+++.
T Consensus 230 ~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 230 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred HHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 3478899999999999999 89998763
No 51
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=9.6e-41 Score=351.64 Aligned_cols=251 Identities=19% Similarity=0.278 Sum_probs=199.5
Q ss_pred ccccccCCCcceEEEEe------CCCcEEEEEEcCCCCCC--HHHHHHHHHHhccC-CCCCccccceEEEeCCe-EEEEE
Q 006903 351 AELLGRGKHGSLYRVVL------DDGLMLAVKRLRDWSIS--SEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQE-KLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~~--~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~-~~lv~ 420 (626)
.+.||+|+||.||+|+. .+++.||||+++..... .+.+.+|++++.++ +||||+++++++...+. .++||
T Consensus 27 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~ 106 (359)
T 3vhe_A 27 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 106 (359)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEE
T ss_pred ceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEE
Confidence 57899999999999973 34689999999764422 35689999999999 79999999999887654 89999
Q ss_pred eecCCCChhHhhcCCCC---------------------------------------------------------------
Q 006903 421 EYQPNGSLFNLLHGSEN--------------------------------------------------------------- 437 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~--------------------------------------------------------------- 437 (626)
||+++|+|.++++....
T Consensus 107 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (359)
T 3vhe_A 107 EFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLY 186 (359)
T ss_dssp ECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------CTT
T ss_pred EecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchh
Confidence 99999999999975332
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc-----cccccccccc
Q 006903 438 GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ-----SFLAQTSSLK 512 (626)
Q Consensus 438 ~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~-----~~~~~~~~~~ 512 (626)
...+++..++.++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++...... ....++..|+
T Consensus 187 ~~~l~~~~~~~~~~ql~~aL~~LH----~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~ 262 (359)
T 3vhe_A 187 KDFLTLEHLICYSFQVAKGMEFLA----SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 262 (359)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGC
T ss_pred ccccCHHHHHHHHHHHHHHHHHHH----HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeE
Confidence 112899999999999999999999 5799999999999999999999999999987542221 2234567899
Q ss_pred hhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhh
Q 006903 513 INDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALR 591 (626)
Q Consensus 513 ~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~ 591 (626)
+||......++.++|||||||++|||+| |+.||................. .... +......+.+++.+
T Consensus 263 aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~-~~~~----------~~~~~~~l~~li~~ 331 (359)
T 3vhe_A 263 APETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT-RMRA----------PDYTTPEMYQTMLD 331 (359)
T ss_dssp CHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTC-CCCC----------CTTCCHHHHHHHHH
T ss_pred ChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCC-CCCC----------CCCCCHHHHHHHHH
Confidence 9999888888999999999999999999 9999875433222222222211 1111 11122358889999
Q ss_pred ccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 592 CINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 592 Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
||+.||++|||+.|++++|+++...
T Consensus 332 ~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 332 CWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HccCChhhCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999998754
No 52
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.8e-40 Score=336.22 Aligned_cols=258 Identities=19% Similarity=0.282 Sum_probs=204.7
Q ss_pred hhhhhcccccccccCCCcceEEEEe-CC---CcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeE
Q 006903 343 FEDLLRAPAELLGRGKHGSLYRVVL-DD---GLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEK 416 (626)
Q Consensus 343 ~~~l~~~~~~~lG~G~fG~Vy~~~~-~~---g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~ 416 (626)
.+.+.....+.||+|+||.||+|.. .+ +..||+|.+..... ..+.+.+|++++++++||||+++++++.+.+..
T Consensus 18 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 97 (298)
T 3pls_A 18 HERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGL 97 (298)
T ss_dssp GGGEEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSC
T ss_pred ccceEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCC
Confidence 3444444568899999999999984 23 33799999976443 235788999999999999999999999876655
Q ss_pred -EEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCc
Q 006903 417 -LLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLI 495 (626)
Q Consensus 417 -~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~ 495 (626)
++||||+.+|+|.+++.. ....+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++
T Consensus 98 ~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH----~~~i~H~dikp~Nili~~~~~~kl~Dfg~~ 171 (298)
T 3pls_A 98 PHVLLPYMCHGDLLQFIRS--PQRNPTVKDLISFGLQVARGMEYLA----EQKFVHRDLAARNCMLDESFTVKVADFGLA 171 (298)
T ss_dssp CEEEECCCTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECTTCCEEECCTTSS
T ss_pred cEEEEecccCCCHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCcceEEEcCCCcEEeCcCCCc
Confidence 999999999999999974 3457899999999999999999999 579999999999999999999999999998
Q ss_pred cccCC-------CccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccc
Q 006903 496 VTENH-------DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVF 568 (626)
Q Consensus 496 ~~~~~-------~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 568 (626)
+.... ......++..|++||......++.++|||||||++|||+||..|+....+..+............
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~--- 248 (298)
T 3pls_A 172 RDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLP--- 248 (298)
T ss_dssp CTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCC---
T ss_pred ccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCC---
Confidence 64322 12233457789999999888889999999999999999997777655544444433333222111
Q ss_pred cHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 569 DEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 569 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
.+......+.+++.+||+.||++|||++++++.|+++....
T Consensus 249 --------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l 289 (298)
T 3pls_A 249 --------QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL 289 (298)
T ss_dssp --------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred --------CCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence 01112235888999999999999999999999999987654
No 53
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=8.2e-40 Score=338.98 Aligned_cols=238 Identities=21% Similarity=0.253 Sum_probs=200.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|+. .+|+.||+|+++... ...+.+.+|+.+++.++||||+++++++.+.+..++||||+++
T Consensus 11 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~g 90 (318)
T 1fot_A 11 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEG 90 (318)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCC
Confidence 47899999999999995 479999999987532 3456788999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcccc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFL 505 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~ 505 (626)
|+|.+++.. ...+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||+++.........
T Consensus 91 g~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~~ 163 (318)
T 1fot_A 91 GELFSLLRK---SQRFPNPVAKFYAAEVCLALEYLH----SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTL 163 (318)
T ss_dssp CBHHHHHHH---TSSCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCC
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCChheEEEcCCCCEEEeecCcceecCCccccc
Confidence 999999964 346899999999999999999999 7899999999999999999999999999998765555556
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.+++.|++||+.....++.++|||||||++|||++|+.||.... ..+....+....... +......+
T Consensus 164 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-~~~~~~~i~~~~~~~------------p~~~~~~~ 230 (318)
T 1fot_A 164 CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN-TMKTYEKILNAELRF------------PPFFNEDV 230 (318)
T ss_dssp CSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS-HHHHHHHHHHCCCCC------------CTTSCHHH
T ss_pred cCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC-HHHHHHHHHhCCCCC------------CCCCCHHH
Confidence 78999999999988888999999999999999999999997543 333333443332110 01112347
Q ss_pred HHHHhhccCCCCCCCC-----CHHHHHH
Q 006903 586 LQVALRCINQSPNERP-----SMNQVAV 608 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RP-----s~~ev~~ 608 (626)
.+++.+||+.||++|| +++|+++
T Consensus 231 ~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 231 KDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp HHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 8899999999999999 8888875
No 54
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=9.5e-40 Score=338.59 Aligned_cols=260 Identities=18% Similarity=0.241 Sum_probs=204.2
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCC--eEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ--EKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~--~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|... +++.||||+++... ...+.+.+|++++++++||||+++++++...+ ..++||||+++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 93 (319)
T 4euu_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93 (319)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTT
T ss_pred EEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCC
Confidence 478999999999999954 58999999997544 34577889999999999999999999988765 67999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee----CCCCCeEEeeccCccccCCC
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF----NNNMEPCISEYGLIVTENHD 501 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl----~~~~~~kl~DFGl~~~~~~~ 501 (626)
|+|.+++........+++..++.++.|++.||.||| +.+|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 94 ~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~ 169 (319)
T 4euu_A 94 GSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR----ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (319)
T ss_dssp CBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTT
T ss_pred CCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH----HCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCC
Confidence 999999976444445999999999999999999999 5799999999999999 78888999999998764332
Q ss_pred c--cccccccccchhhccc--------cCCCCCcchhHHHHHHHHHHHcCCCCCCCC---cchhHHHHHHhhcccccc--
Q 006903 502 Q--SFLAQTSSLKINDISN--------QMCSTIKADVYGFGVILLELLTGKLVQNNG---FNLATWVHSVVREEWTVE-- 566 (626)
Q Consensus 502 ~--~~~~~~~~~~~pe~~~--------~~~~~~k~DVwSfGvvl~elltg~~p~~~~---~~~~~~~~~~~~~~~~~~-- 566 (626)
. ....++..|++||... ...++.++|||||||++|||+||+.||... ....+.+..+........
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (319)
T 4euu_A 170 EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAIS 249 (319)
T ss_dssp CCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCE
T ss_pred CceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccch
Confidence 2 3345788999999865 456789999999999999999999998632 222333333332211000
Q ss_pred --------c--ccHHH-HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 006903 567 --------V--FDEVL-IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIK 614 (626)
Q Consensus 567 --------~--~d~~~-~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~ 614 (626)
. +.... ............+.+++.+||+.||++|||++|+++...+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 250 GVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp EEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred hhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 0 00000 011233556667889999999999999999999999887654
No 55
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=6.1e-40 Score=330.94 Aligned_cols=246 Identities=22% Similarity=0.324 Sum_probs=198.3
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeC--CeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSK--QEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~--~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|+.. ++.||||+++..... .+.+.+|++++++++||||+++++++... +..++||||+++
T Consensus 15 ~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 93 (271)
T 3kmu_A 15 LTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPY 93 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTT
T ss_pred HHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCC
Confidence 478999999999999985 889999999865533 35689999999999999999999999877 778999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCC--ceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDG--IAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS 503 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~--ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~ 503 (626)
|+|.+++... ....+++..++.++.|++.||.||| +.+ |+||||||+||+++.++.++|+|||++..... .
T Consensus 94 ~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH----~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~--~ 166 (271)
T 3kmu_A 94 GSLYNVLHEG-TNFVVDQSQAVKFALDMARGMAFLH----TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS--P 166 (271)
T ss_dssp CBHHHHHHSC-SSCCCCHHHHHHHHHHHHHHHHHHT----TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC--T
T ss_pred CcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHh----cCCCceecCCCccceEEEcCCcceeEEeccceeeecc--c
Confidence 9999999753 2336899999999999999999999 567 99999999999999999999999988654322 2
Q ss_pred ccccccccchhhccccCCCC---CcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHH
Q 006903 504 FLAQTSSLKINDISNQMCST---IKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~~---~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
...++..|++||......++ .++|||||||++|||+||+.||..... .+.............. +..
T Consensus 167 ~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~~----------~~~ 235 (271)
T 3kmu_A 167 GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN-MEIGMKVALEGLRPTI----------PPG 235 (271)
T ss_dssp TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH-HHHHHHHHHSCCCCCC----------CTT
T ss_pred CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh-HHHHHHHHhcCCCCCC----------CCC
Confidence 23567889999987654443 379999999999999999999975433 2222222222211111 111
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhh
Q 006903 581 RMLKLLQVALRCINQSPNERPSMNQVAVMINNIKE 615 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~ 615 (626)
....+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 236 ISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 23358889999999999999999999999999864
No 56
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=349.97 Aligned_cols=250 Identities=18% Similarity=0.252 Sum_probs=200.3
Q ss_pred ccccccCCCcceEEEEeC------CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVLD------DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
.+.||+|+||.||+|.+. +++.||||+++.... ...++.+|+.++++++||||+++++++...+..++||||
T Consensus 76 ~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 155 (367)
T 3l9p_A 76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLEL 155 (367)
T ss_dssp EEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEe
Confidence 478999999999999843 467899999975432 234688999999999999999999999999999999999
Q ss_pred cCCCChhHhhcCCC----CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC---CeEEeeccCc
Q 006903 423 QPNGSLFNLLHGSE----NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM---EPCISEYGLI 495 (626)
Q Consensus 423 ~~~g~L~~~l~~~~----~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~---~~kl~DFGl~ 495 (626)
+++|+|.+++.... ....+++..++.++.|++.||+||| +++|+||||||+|||++.++ .+||+|||++
T Consensus 156 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a 231 (367)
T 3l9p_A 156 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE----ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 231 (367)
T ss_dssp CTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEESCSSTTCCEEECCCHHH
T ss_pred CCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH----hCCeeCCCCChhhEEEecCCCCceEEECCCccc
Confidence 99999999996432 1246899999999999999999999 67999999999999999554 5999999998
Q ss_pred cccC-----CCccccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhccccccccc
Q 006903 496 VTEN-----HDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFD 569 (626)
Q Consensus 496 ~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d 569 (626)
+... .......++..|++||......++.++|||||||++|||+| |+.||... +..+....+...... .
T Consensus 232 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~-~~~~~~~~i~~~~~~-~--- 306 (367)
T 3l9p_A 232 RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-SNQEVLEFVTSGGRM-D--- 306 (367)
T ss_dssp HHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-CHHHHHHHHHTTCCC-C---
T ss_pred cccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHcCCCC-C---
Confidence 6421 12223445778999999888889999999999999999998 88888643 333333333322211 0
Q ss_pred HHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 570 EVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 570 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
........+.+++.+||+.||++|||+.||++.|+.+...
T Consensus 307 -------~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 307 -------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp -------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -------CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 0112233588899999999999999999999999988654
No 57
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.7e-40 Score=340.09 Aligned_cols=257 Identities=22% Similarity=0.334 Sum_probs=196.6
Q ss_pred ccccccCCCcceEEEEe-----CCCcEEEEEEcCCCCC-CHHHHHHHHHHhccCCCCCccccceEEEeC--CeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVL-----DDGLMLAVKRLRDWSI-SSEDFKNRMQKIDHVKHPNVLPPLAYYCSK--QEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-----~~g~~vAvK~l~~~~~-~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~--~~~~lv~Ey 422 (626)
.+.||+|+||.||+|++ .+++.||||++..... ..+.+.+|++++++++||||+++++++... ...++||||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 94 (295)
T 3ugc_A 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 94 (295)
T ss_dssp EEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEEC
T ss_pred hheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEe
Confidence 47899999999999984 3689999999976442 235789999999999999999999998654 458999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ 502 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~ 502 (626)
+++|+|.+++... ...+++..++.++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++.......
T Consensus 95 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (295)
T 3ugc_A 95 LPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLG----TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 168 (295)
T ss_dssp CTTCBHHHHHHHC--GGGCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEEETTEEEECCCCSCC------
T ss_pred CCCCCHHHHHHhc--ccccCHHHHHHHHHHHHHHHHHHh----cCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCc
Confidence 9999999999743 345899999999999999999999 5799999999999999999999999999987543221
Q ss_pred ------cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccccccc----HHH
Q 006903 503 ------SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFD----EVL 572 (626)
Q Consensus 503 ------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d----~~~ 572 (626)
....++..|++||......++.++|||||||++|||+||..|+.... .++........ ...... ..+
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~ 245 (295)
T 3ugc_A 169 EFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP--AEFMRMIGNDK-QGQMIVFHLIELL 245 (295)
T ss_dssp -------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHH--HHHHHHHCTTC-CTHHHHHHHHHHH
T ss_pred ceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCCh--HHHHhhhcCcc-ccchhHHHHHHHH
Confidence 12235566999999888888999999999999999999998875321 11111111100 000000 000
Q ss_pred Hh---hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 573 IA---EAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 573 ~~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.. ...+......+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 246 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 246 KNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred hccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 00 001122345688999999999999999999999999998764
No 58
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=338.49 Aligned_cols=243 Identities=21% Similarity=0.296 Sum_probs=198.1
Q ss_pred cccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC-------CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEe
Q 006903 350 PAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI-------SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYE 421 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~-------~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~E 421 (626)
..+.||+|+||.||+|.. .+|+.||+|.+..... ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus 15 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 94 (326)
T 2y0a_A 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILE 94 (326)
T ss_dssp EEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred eceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEE
Confidence 357899999999999995 4689999999865432 35789999999999999999999999999999999999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC----CeEEeeccCccc
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM----EPCISEYGLIVT 497 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGl~~~ 497 (626)
|+++|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++ .+||+|||++..
T Consensus 95 ~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH----~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~ 167 (326)
T 2y0a_A 95 LVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167 (326)
T ss_dssp CCCSCBHHHHHTT---SSCCBHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred cCCCCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHH----HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeE
Confidence 9999999999953 356999999999999999999999 57999999999999999887 799999999876
Q ss_pred cCC--CccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhh
Q 006903 498 ENH--DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 498 ~~~--~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
... ......+++.|++||......++.++|||||||++|||+||+.||.... ..+....+...... +.....
T Consensus 168 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~~~~~~~~~---~~~~~~-- 241 (326)
T 2y0a_A 168 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-KQETLANVSAVNYE---FEDEYF-- 241 (326)
T ss_dssp CCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS-HHHHHHHHHHTCCC---CCHHHH--
T ss_pred CCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC-HHHHHHHHHhcCCC---cCcccc--
Confidence 432 2234567889999999988888999999999999999999999997543 22333332222111 111110
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 576 AASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
......+.+++.+||+.||++|||+.|+++
T Consensus 242 ---~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 242 ---SNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp ---TTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ---ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 112235788999999999999999999987
No 59
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.9e-40 Score=349.07 Aligned_cols=251 Identities=19% Similarity=0.255 Sum_probs=202.7
Q ss_pred cccccccCCCcceEEEEe--------CCCcEEEEEEcCCCCCC--HHHHHHHHHHhccC-CCCCccccceEEEeCCeEEE
Q 006903 350 PAELLGRGKHGSLYRVVL--------DDGLMLAVKRLRDWSIS--SEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLL 418 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~--------~~g~~vAvK~l~~~~~~--~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~l 418 (626)
..+.||+|+||.||+|+. .++..||||+++..... .+.+.+|+++++++ +||||+++++++...+..++
T Consensus 73 i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 152 (382)
T 3tt0_A 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV 152 (382)
T ss_dssp EEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred eeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEE
Confidence 357899999999999984 23468999999765432 25688999999999 99999999999999999999
Q ss_pred EEeecCCCChhHhhcCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC
Q 006903 419 VYEYQPNGSLFNLLHGSEN-------------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM 485 (626)
Q Consensus 419 v~Ey~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~ 485 (626)
||||+++|+|.+++..... ...+++..++.++.|++.||.||| +.+|+||||||+|||++.++
T Consensus 153 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~ 228 (382)
T 3tt0_A 153 IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA----SKKCIHRDLAARNVLVTEDN 228 (382)
T ss_dssp EEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTC
T ss_pred EEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH----hCCEecCCCCcceEEEcCCC
Confidence 9999999999999975321 245999999999999999999999 57999999999999999999
Q ss_pred CeEEeeccCccccCCC-----ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHh
Q 006903 486 EPCISEYGLIVTENHD-----QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVV 559 (626)
Q Consensus 486 ~~kl~DFGl~~~~~~~-----~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~ 559 (626)
.+||+|||+++..... .....++..|++||......++.++|||||||++|||+| |+.||... +..+....+.
T Consensus 229 ~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~-~~~~~~~~~~ 307 (382)
T 3tt0_A 229 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEELFKLLK 307 (382)
T ss_dssp CEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-CHHHHHHHHH
T ss_pred cEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHH
Confidence 9999999998754322 122345677999999888888999999999999999999 88888643 3333333332
Q ss_pred hcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 560 REEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 560 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
..... .. +......+.+++.+||+.||++|||++|+++.|+++...
T Consensus 308 ~~~~~-~~----------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 353 (382)
T 3tt0_A 308 EGHRM-DK----------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 353 (382)
T ss_dssp TTCCC-CC----------CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCCC-CC----------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 22111 11 111233588899999999999999999999999998754
No 60
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=4e-40 Score=342.48 Aligned_cols=240 Identities=18% Similarity=0.290 Sum_probs=190.5
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCC-------------
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ------------- 414 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~------------- 414 (626)
.+.||+|+||.||+|+.. +|+.||||+++... ...+.+.+|++++++++||||+++++++.+.+
T Consensus 11 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~ 90 (332)
T 3qd2_B 11 IQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWL 90 (332)
T ss_dssp EEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC---
T ss_pred eeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhh
Confidence 478999999999999965 79999999997543 23467999999999999999999999986543
Q ss_pred --------------------------------------------eEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHH
Q 006903 415 --------------------------------------------EKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVA 450 (626)
Q Consensus 415 --------------------------------------------~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~ 450 (626)
..++||||+++|+|.+++.........++..++.++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~ 170 (332)
T 3qd2_B 91 KDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIF 170 (332)
T ss_dssp -----------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHH
T ss_pred ccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHH
Confidence 279999999999999999865544567788899999
Q ss_pred HHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---------------ccccccccccchhh
Q 006903 451 ACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---------------QSFLAQTSSLKIND 515 (626)
Q Consensus 451 ~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---------------~~~~~~~~~~~~pe 515 (626)
.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++..... .....++..|++||
T Consensus 171 ~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 246 (332)
T 3qd2_B 171 IQIAEAVEFLH----SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPE 246 (332)
T ss_dssp HHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHH
T ss_pred HHHHHHHHHHH----hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChH
Confidence 99999999999 579999999999999999999999999998754332 12235788999999
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCC
Q 006903 516 ISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQ 595 (626)
Q Consensus 516 ~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~ 595 (626)
......++.++|||||||++|||++|..|+.. ............ . . .........+.+++.+||+.
T Consensus 247 ~~~~~~~~~~~Di~slG~il~el~~~~~~~~~---~~~~~~~~~~~~-~----~------~~~~~~~~~~~~li~~~l~~ 312 (332)
T 3qd2_B 247 QIHGNNYSHKVDIFSLGLILFELLYSFSTQME---RVRIITDVRNLK-F----P------LLFTQKYPQEHMMVQDMLSP 312 (332)
T ss_dssp HHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH---HHHHHHHHHTTC-C----C------HHHHHHCHHHHHHHHHHHCS
T ss_pred HhcCCCCcchhhHHHHHHHHHHHHHcCCChhH---HHHHHHHhhccC-C----C------cccccCChhHHHHHHHHccC
Confidence 99888889999999999999999998766431 111111111111 0 0 01122334578899999999
Q ss_pred CCCCCCCHHHHHH
Q 006903 596 SPNERPSMNQVAV 608 (626)
Q Consensus 596 dP~~RPs~~ev~~ 608 (626)
||++|||++|+++
T Consensus 313 ~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 313 SPTERPEATDIIE 325 (332)
T ss_dssp SGGGSCCHHHHHH
T ss_pred CCCcCCCHHHHhh
Confidence 9999999999976
No 61
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=5e-40 Score=347.31 Aligned_cols=255 Identities=16% Similarity=0.201 Sum_probs=195.0
Q ss_pred ccccccCCCcceEEEEeCC------CcEEEEEEcCCCCCC------------HHHHHHHHHHhccCCCCCccccceEEEe
Q 006903 351 AELLGRGKHGSLYRVVLDD------GLMLAVKRLRDWSIS------------SEDFKNRMQKIDHVKHPNVLPPLAYYCS 412 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~------g~~vAvK~l~~~~~~------------~~~~~~ei~~l~~l~H~nIv~l~g~~~~ 412 (626)
.+.||+|+||.||+|...+ ++.||||.+...... ...+..|+..++.++||||+++++++..
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~ 119 (364)
T 3op5_A 40 GLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLH 119 (364)
T ss_dssp EEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEE
T ss_pred EEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeee
Confidence 4789999999999998654 478999998654311 1234456667788899999999999877
Q ss_pred C----CeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeC--CCCC
Q 006903 413 K----QEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFN--NNME 486 (626)
Q Consensus 413 ~----~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~--~~~~ 486 (626)
. ...++||||+ +|+|.+++.. ....+++..++.++.|++.||.||| +.+|+||||||+|||++ .++.
T Consensus 120 ~~~~~~~~~lv~e~~-g~~L~~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH----~~~iiHrDlkp~Nill~~~~~~~ 192 (364)
T 3op5_A 120 DKNGKSYRFMIMDRF-GSDLQKIYEA--NAKRFSRKTVLQLSLRILDILEYIH----EHEYVHGDIKASNLLLNYKNPDQ 192 (364)
T ss_dssp EETTEEEEEEEEECE-EEEHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEEESSCTTC
T ss_pred ccCCcceEEEEEeCC-CCCHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHH----HCCeEEecCCHHHEEEecCCCCe
Confidence 5 4589999999 9999999974 2357999999999999999999999 57999999999999999 8899
Q ss_pred eEEeeccCccccCCCc----------cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHH
Q 006903 487 PCISEYGLIVTENHDQ----------SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVH 556 (626)
Q Consensus 487 ~kl~DFGl~~~~~~~~----------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~ 556 (626)
+||+|||+++...... ....++..|++||......++.++|||||||++|||+||+.||........+..
T Consensus 193 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~ 272 (364)
T 3op5_A 193 VYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVR 272 (364)
T ss_dssp EEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHH
T ss_pred EEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHH
Confidence 9999999986532211 223478899999999888899999999999999999999999974333322222
Q ss_pred HHhhc--ccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 557 SVVRE--EWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 557 ~~~~~--~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
..... ....+..+..+.. ...+..+.+++..||+.||++||++.++++.|+++...
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~ 330 (364)
T 3op5_A 273 DSKIRYRENIASLMDKCFPA----ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA 330 (364)
T ss_dssp HHHHHHHHCHHHHHHHHSCT----TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHhhhhHHHHHHHhccc----ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 11111 0111111111110 11234588899999999999999999999999988764
No 62
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.2e-40 Score=348.72 Aligned_cols=250 Identities=22% Similarity=0.299 Sum_probs=190.6
Q ss_pred cccccccCCCcceEEEEeC--C--CcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEe-CCeEEEEEee
Q 006903 350 PAELLGRGKHGSLYRVVLD--D--GLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCS-KQEKLLVYEY 422 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~--~--g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~-~~~~~lv~Ey 422 (626)
..+.||+|+||.||+|... + +..||||.++.... ..+++.+|+.++++++||||+++++++.. ++..++||||
T Consensus 93 ~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~ 172 (373)
T 3c1x_A 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY 172 (373)
T ss_dssp EEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEEC
T ss_pred cCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEEC
Confidence 4578999999999999853 2 24689999875443 23678999999999999999999998754 4578999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC-
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD- 501 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~- 501 (626)
+++|+|.++++. ....+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 173 ~~~g~L~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 246 (373)
T 3c1x_A 173 MKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKFLA----SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246 (373)
T ss_dssp CTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred CCCCCHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHH----HCCEecCccchheEEECCCCCEEEeeccccccccccc
Confidence 999999999974 3456889999999999999999999 579999999999999999999999999998643221
Q ss_pred ------ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHh
Q 006903 502 ------QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIA 574 (626)
Q Consensus 502 ------~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 574 (626)
.....++..|++||......++.++|||||||++|||+| |.+||... +..+............
T Consensus 247 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~-~~~~~~~~~~~~~~~~--------- 316 (373)
T 3c1x_A 247 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLL--------- 316 (373)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS-CSSCHHHHHHTTCCCC---------
T ss_pred cccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCC-CHHHHHHHHHcCCCCC---------
Confidence 122345667999999888888999999999999999999 55566432 2222222222221110
Q ss_pred hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 575 EAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 575 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
.+......+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 317 --~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~ 357 (373)
T 3c1x_A 317 --QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 357 (373)
T ss_dssp --CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred --CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 01112335888999999999999999999999999987653
No 63
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=3.1e-40 Score=336.85 Aligned_cols=250 Identities=20% Similarity=0.269 Sum_probs=197.5
Q ss_pred ccccccCCCcceEEEEeC-CC-------cEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVVLD-DG-------LMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g-------~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~E 421 (626)
.+.||+|+||.||+|... ++ ..||+|.+.... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 92 (289)
T 4fvq_A 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQE 92 (289)
T ss_dssp EEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEE
T ss_pred eeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEE
Confidence 478999999999999843 33 579999997654 345779999999999999999999999999999999999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC--------eEEeecc
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME--------PCISEYG 493 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~--------~kl~DFG 493 (626)
|+++|+|.+++... ...+++..+..++.|++.||.||| +++|+||||||+|||++.++. +||+|||
T Consensus 93 ~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg 166 (289)
T 4fvq_A 93 FVKFGSLDTYLKKN--KNCINILWKLEVAKQLAAAMHFLE----ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG 166 (289)
T ss_dssp CCTTCBHHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCC
T ss_pred CCCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHh----hCCeECCCcCcceEEEecCCcccccccceeeeccCc
Confidence 99999999999742 345899999999999999999999 579999999999999998887 9999999
Q ss_pred CccccCCCccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHH
Q 006903 494 LIVTENHDQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVL 572 (626)
Q Consensus 494 l~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 572 (626)
++...... ....++..|++||.... ..++.++|||||||++|||+||..|+....+................
T Consensus 167 ~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~------ 239 (289)
T 4fvq_A 167 ISITVLPK-DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPA------ 239 (289)
T ss_dssp SCTTTSCH-HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC------
T ss_pred ccccccCc-cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccCCCCC------
Confidence 98654332 23446778999998876 66899999999999999999976665544443333222211111110
Q ss_pred HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccccc
Q 006903 573 IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEERS 620 (626)
Q Consensus 573 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~~~ 620 (626)
.....+.+++.+||+.||++|||+.|+++.|+++.......
T Consensus 240 -------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~~ 280 (289)
T 4fvq_A 240 -------PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVP 280 (289)
T ss_dssp -------CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC------
T ss_pred -------CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCCC
Confidence 01224778899999999999999999999999997755433
No 64
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.1e-39 Score=337.02 Aligned_cols=250 Identities=19% Similarity=0.244 Sum_probs=191.5
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|+..+|+.||+|+++..... .+.+.+|++++++++||||+++++++.+++..++||||+++ +
T Consensus 26 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~ 104 (311)
T 3niz_A 26 LEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-D 104 (311)
T ss_dssp EEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCSE-E
T ss_pred hhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCCC-C
Confidence 4789999999999999888999999999754422 35788999999999999999999999999999999999984 8
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---Cccc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---DQSF 504 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~~~~ 504 (626)
|.+++.. ....+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++.... ....
T Consensus 105 l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 178 (311)
T 3niz_A 105 LKKVLDE--NKTGLQDSQIKIYLYQLLRGVAHCH----QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH 178 (311)
T ss_dssp HHHHHHT--CTTCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---C
T ss_pred HHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcccccC
Confidence 8888864 3356899999999999999999999 57999999999999999999999999999875432 2233
Q ss_pred cccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHH--HHHHhhcccccc---------------
Q 006903 505 LAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATW--VHSVVREEWTVE--------------- 566 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~--------------- 566 (626)
..++..|++||.... ..++.++|||||||++|||+||+.||......... +...........
T Consensus 179 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (311)
T 3niz_A 179 EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTF 258 (311)
T ss_dssp CCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCC
T ss_pred CcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhccc
Confidence 456888999998754 56799999999999999999999999743332221 111111110000
Q ss_pred -cccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 567 -VFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 567 -~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
....... ....+.....+.+++.+||+.||++|||++|+++
T Consensus 259 ~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 259 QVFEKKPW-SSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp CCCCCCCH-HHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred ccccCCcH-HHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0000000 0001112345789999999999999999999987
No 65
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=4.6e-40 Score=339.41 Aligned_cols=254 Identities=20% Similarity=0.323 Sum_probs=203.5
Q ss_pred cccccccCCCcceEEEEe------CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEE
Q 006903 350 PAELLGRGKHGSLYRVVL------DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVY 420 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~ 420 (626)
..+.||+|+||.||+|.. .+++.||||+++.... ..+.+.+|+++++++ +||||+++++++...+..++||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 106 (313)
T 1t46_A 27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVIT 106 (313)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEE
Confidence 457899999999999984 3578999999976542 236789999999999 9999999999999999999999
Q ss_pred eecCCCChhHhhcCCCC---------------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC
Q 006903 421 EYQPNGSLFNLLHGSEN---------------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM 485 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~---------------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~ 485 (626)
||+++|+|.+++..... ...+++..++.++.|++.||.||| +.+|+||||||+||+++.++
T Consensus 107 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~ 182 (313)
T 1t46_A 107 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA----SKNCIHRDLAARNILLTHGR 182 (313)
T ss_dssp ECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEETTT
T ss_pred ecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCccceEEEcCCC
Confidence 99999999999975322 125899999999999999999999 57999999999999999999
Q ss_pred CeEEeeccCccccCCCcc-----ccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHh
Q 006903 486 EPCISEYGLIVTENHDQS-----FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVV 559 (626)
Q Consensus 486 ~~kl~DFGl~~~~~~~~~-----~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~ 559 (626)
.+||+|||++........ ...++..|++||......++.++|||||||++|||+| |+.||......... ....
T Consensus 183 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~-~~~~ 261 (313)
T 1t46_A 183 ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF-YKMI 261 (313)
T ss_dssp EEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHH-HHHH
T ss_pred CEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHH-HHHh
Confidence 999999999875433221 2334567999999888888999999999999999999 99998754332222 2222
Q ss_pred hcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccc
Q 006903 560 REEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618 (626)
Q Consensus 560 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~ 618 (626)
....... ........+.+++.+||+.||++|||+.|+++.|+++..+..
T Consensus 262 ~~~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 310 (313)
T 1t46_A 262 KEGFRML----------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310 (313)
T ss_dssp HHTCCCC----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred ccCCCCC----------CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence 2211110 011123458889999999999999999999999999876543
No 66
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=4.8e-40 Score=339.45 Aligned_cols=251 Identities=21% Similarity=0.309 Sum_probs=201.1
Q ss_pred cccccccCCCcceEEEEe------CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEe
Q 006903 350 PAELLGRGKHGSLYRVVL------DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYE 421 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~E 421 (626)
..+.||+|+||.||+|.. .+++.||||.++.... ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 106 (314)
T 2ivs_A 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVE 106 (314)
T ss_dssp EEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEe
Confidence 457899999999999984 3458999999976432 23578899999999999999999999999999999999
Q ss_pred ecCCCChhHhhcCCCC---------------------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCee
Q 006903 422 YQPNGSLFNLLHGSEN---------------------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNIL 480 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NIL 480 (626)
|+++|+|.+++..... ...+++..++.++.|++.||.||| +++|+||||||+||+
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~dikp~NIl 182 (314)
T 2ivs_A 107 YAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA----EMKLVHRDLAARNIL 182 (314)
T ss_dssp CCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEE
T ss_pred ecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH----HCCCcccccchheEE
Confidence 9999999999975322 134889999999999999999999 579999999999999
Q ss_pred eCCCCCeEEeeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHH
Q 006903 481 FNNNMEPCISEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATW 554 (626)
Q Consensus 481 l~~~~~~kl~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~ 554 (626)
++.++.+||+|||++....... ....++..|++||......++.++|||||||++|||+| |+.||.... ....
T Consensus 183 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~-~~~~ 261 (314)
T 2ivs_A 183 VAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP-PERL 261 (314)
T ss_dssp EETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC-GGGH
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC-HHHH
Confidence 9999999999999987543222 22345667999999887778999999999999999999 999986432 2222
Q ss_pred HHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 555 VHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 555 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
........ ... ........+.+++.+||+.||++|||+.|+++.|+++..+
T Consensus 262 ~~~~~~~~-~~~----------~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 262 FNLLKTGH-RME----------RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp HHHHHTTC-CCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHhhcCC-cCC----------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 22222211 111 1112234588899999999999999999999999998653
No 67
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=9.8e-40 Score=333.61 Aligned_cols=249 Identities=23% Similarity=0.402 Sum_probs=191.7
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCH---HHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~---~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|+... .||||+++...... +.+.+|++++++++||||+++++++ ..+..++||||+++++
T Consensus 29 ~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~ 105 (289)
T 3og7_A 29 GQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSS 105 (289)
T ss_dssp EEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEE
T ss_pred eeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCCc
Confidence 4789999999999998643 59999997655433 5689999999999999999999964 5567899999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC-----Cc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH-----DQ 502 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~-----~~ 502 (626)
|.+++.. ....+++..++.++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++..... ..
T Consensus 106 L~~~l~~--~~~~~~~~~~~~i~~qi~~~L~~lH----~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 179 (289)
T 3og7_A 106 LYHHLHA--SETKFEMKKLIDIARQTARGMDYLH----AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF 179 (289)
T ss_dssp HHHHHTT--C---CCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEEETTTEEEECCCC--------------
T ss_pred HHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHH----hCCcccccCccceEEECCCCCEEEccceeccccccccccccc
Confidence 9999963 3356999999999999999999999 57999999999999999999999999999864322 11
Q ss_pred cccccccccchhhccc---cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccH
Q 006903 503 SFLAQTSSLKINDISN---QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASE 579 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~---~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 579 (626)
....++..|++||... ...++.++|||||||++|||+||+.||...................... . ....
T Consensus 180 ~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~ 252 (289)
T 3og7_A 180 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDL-S------KVRS 252 (289)
T ss_dssp ----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCT-T------SSCT
T ss_pred cccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcch-h------hccc
Confidence 2345788899999875 5567889999999999999999999997655544443333332211110 0 0111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhh
Q 006903 580 ERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKE 615 (626)
Q Consensus 580 ~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~ 615 (626)
.....+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 253 ~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 253 NCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 233468899999999999999999999999999864
No 68
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=5.7e-40 Score=341.08 Aligned_cols=242 Identities=17% Similarity=0.191 Sum_probs=193.2
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|... +++.||||++.... ...+.+.+|+.+++.++||||+++++++.+.+..++||||+++|+
T Consensus 12 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~ 91 (323)
T 3tki_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91 (323)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEE
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCc
Confidence 478999999999999854 78999999986543 234678999999999999999999999999999999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC-----Cc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH-----DQ 502 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~-----~~ 502 (626)
|.+++.. ...+++..+..++.|++.||.||| +.||+||||||+|||++.++.+||+|||++..... ..
T Consensus 92 L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH----~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 164 (323)
T 3tki_A 92 LFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164 (323)
T ss_dssp GGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCB
T ss_pred HHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCccccc
Confidence 9999963 356999999999999999999999 57999999999999999999999999999864321 12
Q ss_pred cccccccccchhhccccCCC-CCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 503 SFLAQTSSLKINDISNQMCS-TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~-~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
....++..|++||......+ +.++|||||||++|||+||+.||...................... ....
T Consensus 165 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~----------~~~~ 234 (323)
T 3tki_A 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP----------WKKI 234 (323)
T ss_dssp CSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTT----------GGGS
T ss_pred CCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCc----------cccC
Confidence 23467889999998866554 778999999999999999999997544332222222221111100 0112
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
...+.+++.+||+.||++|||+.|+++.
T Consensus 235 ~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 235 DSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 2347789999999999999999999764
No 69
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=7.8e-40 Score=330.67 Aligned_cols=243 Identities=24% Similarity=0.341 Sum_probs=188.3
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCC-----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSI-----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~-----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|... ++.||||+++.... ..+.+.+|+++++.++||||+++++++..++..++||||+++
T Consensus 12 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 90 (271)
T 3dtc_A 12 EEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARG 90 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTT
T ss_pred eeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCC
Confidence 478999999999999975 88999999875432 236789999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCC---ceeccCCCCCeeeCC--------CCCeEEeeccC
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDG---IAHGNLKSNNILFNN--------NMEPCISEYGL 494 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~---ivHrDlkp~NILl~~--------~~~~kl~DFGl 494 (626)
|+|.+++.. ..+++..+..++.|++.||.|||+ .+ |+||||||+|||++. ++.+||+|||+
T Consensus 91 ~~L~~~~~~----~~~~~~~~~~i~~~l~~~l~~lH~----~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~ 162 (271)
T 3dtc_A 91 GPLNRVLSG----KRIPPDILVNWAVQIARGMNYLHD----EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL 162 (271)
T ss_dssp EEHHHHHTS----SCCCHHHHHHHHHHHHHHHHHHHH----SSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC
T ss_pred CCHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHh----CCCCceeecCCchHHEEEecccccccccCcceEEccCCc
Confidence 999999952 468999999999999999999994 56 999999999999986 67899999999
Q ss_pred ccccCCC-ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHH
Q 006903 495 IVTENHD-QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLI 573 (626)
Q Consensus 495 ~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 573 (626)
+...... .....++..|++||......++.++||||||+++|||+||+.||...... ..............
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~------- 234 (271)
T 3dtc_A 163 AREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL-AVAYGVAMNKLALP------- 234 (271)
T ss_dssp -------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH-HHHHHHHTSCCCCC-------
T ss_pred ccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHhhhcCCCCCC-------
Confidence 8653322 22346788899999988888899999999999999999999999754322 22222222211111
Q ss_pred hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 574 AEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 574 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
.+......+.+++.+||+.||++|||+.|+++.|+++
T Consensus 235 ---~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 235 ---IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp ---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred ---CCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 1112234588899999999999999999999999864
No 70
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.7e-40 Score=343.23 Aligned_cols=253 Identities=18% Similarity=0.268 Sum_probs=199.4
Q ss_pred cccccccCCCcceEEEEe------CCCcEEEEEEcCCCC--CCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEE
Q 006903 350 PAELLGRGKHGSLYRVVL------DDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVY 420 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~ 420 (626)
..+.||+|+||.||+|.. .++..||||.++... ...+.+.+|+++++++ +||||+++++++...+..++||
T Consensus 49 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 128 (344)
T 1rjb_A 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIF 128 (344)
T ss_dssp EEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEE
Confidence 357899999999999985 246789999997543 2346799999999999 8999999999999999999999
Q ss_pred eecCCCChhHhhcCCCCC--------------------CCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCee
Q 006903 421 EYQPNGSLFNLLHGSENG--------------------QSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNIL 480 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~--------------------~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NIL 480 (626)
||+++|+|.+++...... ..+++..++.++.|++.||.||| +.||+||||||+|||
T Consensus 129 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dikp~NIl 204 (344)
T 1rjb_A 129 EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE----FKSCVHRDLAARNVL 204 (344)
T ss_dssp ECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH----HTTEEETTCSGGGEE
T ss_pred ecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCChhhEE
Confidence 999999999999753321 34899999999999999999999 579999999999999
Q ss_pred eCCCCCeEEeeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHH
Q 006903 481 FNNNMEPCISEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATW 554 (626)
Q Consensus 481 l~~~~~~kl~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~ 554 (626)
++.++.+||+|||++....... ....++..|++||......++.++|||||||++|||+| |+.||........
T Consensus 205 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~- 283 (344)
T 1rjb_A 205 VTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN- 283 (344)
T ss_dssp EETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-
T ss_pred EcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHH-
Confidence 9999999999999986543221 12345667999999888888999999999999999998 9999875433222
Q ss_pred HHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 555 VHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 555 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
+............ +......+.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 284 ~~~~~~~~~~~~~----------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 284 FYKLIQNGFKMDQ----------PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp HHHHHHTTCCCCC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred HHHHHhcCCCCCC----------CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 2222222211110 1112345888999999999999999999999999987653
No 71
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=5.6e-40 Score=333.90 Aligned_cols=249 Identities=20% Similarity=0.267 Sum_probs=191.4
Q ss_pred cccccccCCCcceEEEEeC----CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 350 PAELLGRGKHGSLYRVVLD----DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~----~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
..+.||+|+||.||+|... .+..||+|.++.... ..+.+.+|+.++++++||||+++++++ .++..++||||+
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~ 97 (281)
T 1mp8_A 19 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELC 97 (281)
T ss_dssp EEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEEEEECC
T ss_pred EEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEEEEecC
Confidence 3578999999999999853 256799999876432 235789999999999999999999987 456789999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc-
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ- 502 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~- 502 (626)
++|+|.+++... ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 98 ~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 171 (281)
T 1mp8_A 98 TLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLE----SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 171 (281)
T ss_dssp TTEEHHHHHHHT--TTTSCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEEETTEEEECC------------
T ss_pred CCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH----hCCeecccccHHHEEECCCCCEEECccccccccCcccc
Confidence 999999999742 346899999999999999999999 5799999999999999999999999999986543221
Q ss_pred ---cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 503 ---SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 503 ---~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
....++..|++||......++.++|||||||++|||++ |+.||..... .+....+...... . .+
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~-~~~~~~i~~~~~~-~----------~~ 239 (281)
T 1mp8_A 172 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN-NDVIGRIENGERL-P----------MP 239 (281)
T ss_dssp -------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG-GGHHHHHHTTCCC-C----------CC
T ss_pred cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH-HHHHHHHHcCCCC-C----------CC
Confidence 22334567999999888888999999999999999997 8888864322 2233332222111 0 11
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 579 EERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
......+.+++.+||+.||++|||+.|+++.|+++.++.
T Consensus 240 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 240 PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 122345788999999999999999999999999987654
No 72
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=4.9e-40 Score=342.15 Aligned_cols=247 Identities=17% Similarity=0.281 Sum_probs=192.7
Q ss_pred ccccccCCCcceEEEEe-CCCc----EEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVL-DDGL----MLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~----~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.+.||+|+||.||+|+. .+++ .||+|.++... ...+.+.+|++++++++||||+++++++... ..++|+||+
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~v~e~~ 98 (327)
T 3poz_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLM 98 (327)
T ss_dssp EEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEEEEECC
T ss_pred ceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEEEEEec
Confidence 47899999999999984 3444 46888886543 3457899999999999999999999998865 478999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc-
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ- 502 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~- 502 (626)
++|+|.+++... ...+++..++.++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 99 ~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 172 (327)
T 3poz_A 99 PFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLE----DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172 (327)
T ss_dssp TTCBHHHHHHHS--TTSCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC
T ss_pred CCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHh----hCCeeCCCCChheEEECCCCCEEEccCcceeEccCCcc
Confidence 999999999742 356999999999999999999999 5799999999999999999999999999986533221
Q ss_pred ----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhc
Q 006903 503 ----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 503 ----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
....++..|++||......++.++|||||||++|||+| |+.||... ...+............ .
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~-~~~~~~~~~~~~~~~~-----------~ 240 (327)
T 3poz_A 173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLP-----------Q 240 (327)
T ss_dssp -------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-CGGGHHHHHHTTCCCC-----------C
T ss_pred cccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCC-CHHHHHHHHHcCCCCC-----------C
Confidence 12234668999999888889999999999999999999 99998643 2222222222211110 1
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 578 SEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.......+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 241 ~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 241 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp CTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred CccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 112233588899999999999999999999999987653
No 73
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=9.1e-40 Score=340.44 Aligned_cols=250 Identities=13% Similarity=0.105 Sum_probs=201.0
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|.. .+|+.||||.+.... ..+.+.+|+++++++ +||||+++++++...+..++||||+ +|+|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L 91 (330)
T 2izr_A 14 GKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSL 91 (330)
T ss_dssp EEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCH
Confidence 47899999999999994 679999999987543 234688999999999 9999999999999999999999999 9999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC-----eEEeeccCccccCCC--
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME-----PCISEYGLIVTENHD-- 501 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~-----~kl~DFGl~~~~~~~-- 501 (626)
.+++... ...+++..++.++.|++.||.||| +.+|+||||||+|||++.++. +||+|||+++.....
T Consensus 92 ~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH----~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~ 165 (330)
T 2izr_A 92 EDLFDLC--DRTFSLKTVLMIAIQLISRMEYVH----SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPET 165 (330)
T ss_dssp HHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTT
T ss_pred HHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCC
Confidence 9999743 357999999999999999999999 579999999999999998887 999999998753221
Q ss_pred --------ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCC--cchhHHHHHHhhcccccccccHH
Q 006903 502 --------QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNG--FNLATWVHSVVREEWTVEVFDEV 571 (626)
Q Consensus 502 --------~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~--~~~~~~~~~~~~~~~~~~~~d~~ 571 (626)
.....++..|++||......++.++|||||||++|||+||+.||... ....+....+....... ...
T Consensus 166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~---~~~ 242 (330)
T 2izr_A 166 KKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRAT---PIE 242 (330)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHS---CHH
T ss_pred CccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccC---CHH
Confidence 12456788999999998888899999999999999999999999743 22323232222111000 000
Q ss_pred HHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 572 LIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 572 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
. .....+ .+.+++..||+.||.+||++.+|.+.|+++...
T Consensus 243 ~----~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~ 282 (330)
T 2izr_A 243 V----LCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 282 (330)
T ss_dssp H----HTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred H----HhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence 0 001112 688999999999999999999999999987654
No 74
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-39 Score=339.53 Aligned_cols=258 Identities=23% Similarity=0.333 Sum_probs=194.3
Q ss_pred cccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhcc--CCCCCccccceEEEeC----CeEEEEEeec
Q 006903 350 PAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDH--VKHPNVLPPLAYYCSK----QEKLLVYEYQ 423 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~--l~H~nIv~l~g~~~~~----~~~~lv~Ey~ 423 (626)
..+.||+|+||.||+|+.. ++.||||++.... ...+.+|.+++.. ++||||+++++++... ...++||||+
T Consensus 41 ~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 117 (337)
T 3mdy_A 41 MVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE--EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYH 117 (337)
T ss_dssp EEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCC
T ss_pred EEeEeecCCCeEEEEEEEC-CceEEEEEEeccc--cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEecc
Confidence 3578999999999999975 8999999986432 3444555555544 5999999999999887 6789999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhc----cCCCceeccCCCCCeeeCCCCCeEEeeccCccccC
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEEL----REDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN 499 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~----~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~ 499 (626)
++|+|.++++. ..+++..++.++.|++.||.|||+.+ +.++|+||||||+|||++.++.+||+|||+++...
T Consensus 118 ~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~ 193 (337)
T 3mdy_A 118 ENGSLYDYLKS----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFI 193 (337)
T ss_dssp TTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred CCCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeec
Confidence 99999999963 35899999999999999999999321 12299999999999999999999999999986532
Q ss_pred CCc-------cccccccccchhhccccCCCCCc------chhHHHHHHHHHHHcC----------CCCCCCCc---chhH
Q 006903 500 HDQ-------SFLAQTSSLKINDISNQMCSTIK------ADVYGFGVILLELLTG----------KLVQNNGF---NLAT 553 (626)
Q Consensus 500 ~~~-------~~~~~~~~~~~pe~~~~~~~~~k------~DVwSfGvvl~elltg----------~~p~~~~~---~~~~ 553 (626)
... ....++..|++||.......+.+ +|||||||++|||+|| +.||.... ....
T Consensus 194 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~ 273 (337)
T 3mdy_A 194 SDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYE 273 (337)
T ss_dssp ---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHH
T ss_pred cccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchh
Confidence 221 13457889999999876655554 9999999999999999 55554211 1111
Q ss_pred HHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccc
Q 006903 554 WVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618 (626)
Q Consensus 554 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~ 618 (626)
..............+. ......++...+.+++.+||+.||++|||+.|+++.|+.+.++.+
T Consensus 274 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 274 DMREIVCIKKLRPSFP----NRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp HHHHHHTTSCCCCCCC----GGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred hhHHHHhhhccCcccc----ccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 1122111111111111 111223566779999999999999999999999999999987654
No 75
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1e-39 Score=332.92 Aligned_cols=250 Identities=22% Similarity=0.326 Sum_probs=204.8
Q ss_pred cccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 350 PAELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
..+.||+|+||.||+|... ++..||+|.+.......+.+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 17 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 96 (288)
T 3kfa_A 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 96 (288)
T ss_dssp EEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEH
T ss_pred EEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcH
Confidence 3578999999999999965 588999999987666668899999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc----cc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ----SF 504 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~----~~ 504 (626)
.+++... ....+++..+..++.+++.||.||| +.+|+||||||+||+++.++.+||+|||++....... ..
T Consensus 97 ~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 171 (288)
T 3kfa_A 97 LDYLREC-NRQEVSAVVLLYMATQISSAMEYLE----KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171 (288)
T ss_dssp HHHHHHC-CTTTSCHHHHHHHHHHHHHHHHHHH----HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETT
T ss_pred HHHHHhc-ccCCccHhHHHHHHHHHHHHHHHHH----HCCccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccC
Confidence 9999753 3356899999999999999999999 5689999999999999999999999999987644322 12
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
..++..|++||......++.++||||||+++|||++ |+.||... +............ ... .+.....
T Consensus 172 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~-~~~~~~~~~~~~~-~~~----------~~~~~~~ 239 (288)
T 3kfa_A 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDY-RME----------RPEGCPE 239 (288)
T ss_dssp EEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-CGGGHHHHHHTTC-CCC----------CCTTCCH
T ss_pred CccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHhccC-CCC----------CCCCCCH
Confidence 234567999999888888999999999999999999 88888643 2222222222211 111 1112234
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 584 KLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.+.+++.+||+.||++|||+.|+++.|+.+..+
T Consensus 240 ~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 240 KVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 588899999999999999999999999987654
No 76
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=345.27 Aligned_cols=248 Identities=21% Similarity=0.284 Sum_probs=196.3
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|.. .+|+.||+|+++... ...+.+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 46799999999999985 579999999997654 3456799999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee--CCCCCeEEeeccCccccCCC--ccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF--NNNMEPCISEYGLIVTENHD--QSF 504 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl--~~~~~~kl~DFGl~~~~~~~--~~~ 504 (626)
.+++.. ....+++..+..++.|++.||.||| +.+|+||||||+|||+ +.++.+||+|||+++..... ...
T Consensus 174 ~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~ 247 (373)
T 2x4f_A 174 FDRIID--ESYNLTELDTILFMKQICEGIRHMH----QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV 247 (373)
T ss_dssp HHHHHH--TGGGCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCC
T ss_pred HHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH----HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccccc
Confidence 998863 2346899999999999999999999 5799999999999999 66788999999998764332 233
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK 584 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 584 (626)
..++..|++||......++.++|||||||++|||+||+.||.... ..+....+....+... ... .......
T Consensus 248 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~-~~~~~~~i~~~~~~~~--~~~------~~~~~~~ 318 (373)
T 2x4f_A 248 NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN-DAETLNNILACRWDLE--DEE------FQDISEE 318 (373)
T ss_dssp CCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSS-HHHHHHHHHHTCCCSC--SGG------GTTSCHH
T ss_pred ccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhccCCCC--hhh------hccCCHH
Confidence 457889999999888888999999999999999999999997543 3333344433322111 000 0112335
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHH--HHHhh
Q 006903 585 LLQVALRCINQSPNERPSMNQVAV--MINNI 613 (626)
Q Consensus 585 l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i 613 (626)
+.+++.+||+.||++|||+.|+++ .+.+.
T Consensus 319 ~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 319 AKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred HHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 888999999999999999999987 45443
No 77
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=365.97 Aligned_cols=246 Identities=20% Similarity=0.249 Sum_probs=198.6
Q ss_pred ccccCCCcceEEEEeC---CCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 353 LLGRGKHGSLYRVVLD---DGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 353 ~lG~G~fG~Vy~~~~~---~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.||+|+||.||+|.+. ++..||||+++... ...+++.+|+++|++++|||||++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 6999999999999853 56789999998653 345789999999999999999999999876 56899999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc----
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS---- 503 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~---- 503 (626)
|.+++.. ....+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++.......
T Consensus 422 L~~~l~~--~~~~l~~~~~~~i~~qi~~~L~~LH----~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 495 (613)
T 2ozo_A 422 LHKFLVG--KREEIPVSNVAELLHQVSMGMKYLE----EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 495 (613)
T ss_dssp HHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------
T ss_pred HHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHH----HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeee
Confidence 9999964 3456999999999999999999999 57999999999999999999999999999876432211
Q ss_pred --ccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHH
Q 006903 504 --FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 504 --~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
...++..|++||......++.++|||||||++|||+| |+.||..... .+....+.... ... .+..
T Consensus 496 ~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~-~~~~~~i~~~~-~~~----------~p~~ 563 (613)
T 2ozo_A 496 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-PEVMAFIEQGK-RME----------CPPE 563 (613)
T ss_dssp ------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS-HHHHHHHHTTC-CCC----------CCTT
T ss_pred ccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH-HHHHHHHHcCC-CCC----------CCCc
Confidence 1223467999999988889999999999999999998 9999875332 33333332221 111 1122
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 581 RMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
+...+.+++.+||+.||++||++.+|++.|+.+....
T Consensus 564 ~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~ 600 (613)
T 2ozo_A 564 CPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 600 (613)
T ss_dssp CCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 3346889999999999999999999999999876543
No 78
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=341.90 Aligned_cols=242 Identities=20% Similarity=0.260 Sum_probs=185.0
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
.+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|++++++++||||+++++++...+..++||||+++|+|.
T Consensus 58 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 136 (349)
T 2w4o_A 58 ESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELF 136 (349)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHH
Confidence 478999999999999965 58899999997543 4467889999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC---CCCeEEeeccCccccCCC--ccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN---NMEPCISEYGLIVTENHD--QSF 504 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGl~~~~~~~--~~~ 504 (626)
+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++. ++.+||+|||+++..... ...
T Consensus 137 ~~l~~---~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~ 209 (349)
T 2w4o_A 137 DRIVE---KGYYSERDAADAVKQILEAVAYLH----ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT 209 (349)
T ss_dssp HHHTT---CSSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEESSSSTTCCEEECCCC-------------
T ss_pred HHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCccccccc
Confidence 99963 346899999999999999999999 579999999999999975 889999999998754332 233
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK 584 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 584 (626)
..++..|++||......++.++|||||||++|||+||+.||............+........ .+ ........
T Consensus 210 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~--~~------~~~~~~~~ 281 (349)
T 2w4o_A 210 VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFI--SP------WWDEVSLN 281 (349)
T ss_dssp ---CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCC--TT------TTTTSCHH
T ss_pred ccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccC--Cc------hhhhCCHH
Confidence 45788999999998888899999999999999999999999765544333444333321110 00 01112335
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHH
Q 006903 585 LLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 585 l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+.+++.+||+.||++|||+.|+++
T Consensus 282 ~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 282 AKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHHhc
Confidence 788999999999999999999976
No 79
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=3.6e-39 Score=340.35 Aligned_cols=244 Identities=18% Similarity=0.264 Sum_probs=197.7
Q ss_pred cccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCH---HHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 350 PAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~---~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
..+.||+|+||.||+|.. .+|+.||+|++....... +.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 33 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g 112 (362)
T 2bdw_A 33 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 112 (362)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence 357899999999999985 468999999997655433 4688999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC---CeEEeeccCccccCCCc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM---EPCISEYGLIVTENHDQ 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~---~~kl~DFGl~~~~~~~~ 502 (626)
|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++ .+||+|||++.......
T Consensus 113 g~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH----~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~ 185 (362)
T 2bdw_A 113 GELFEDIVA---REFYSEADASHCIQQILESIAYCH----SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE 185 (362)
T ss_dssp CBHHHHHTT---CSCCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc
Confidence 999999953 346899999999999999999999 57999999999999998654 59999999987644322
Q ss_pred --cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHH
Q 006903 503 --SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 503 --~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
....+++.|++||......++.++|||||||++|||++|+.||.... ..+....+........ .+ ....
T Consensus 186 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~-~~~~~~~i~~~~~~~~--~~------~~~~ 256 (362)
T 2bdw_A 186 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED-QHRLYAQIKAGAYDYP--SP------EWDT 256 (362)
T ss_dssp SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHTCCCCC--TT------GGGG
T ss_pred ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC-HHHHHHHHHhCCCCCC--cc------cccC
Confidence 23567889999999988889999999999999999999999997543 3333333333221110 00 0011
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 581 RMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
....+.+++.+||+.||++|||+.|+++.
T Consensus 257 ~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 257 VTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 22357889999999999999999998763
No 80
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.1e-39 Score=340.36 Aligned_cols=238 Identities=17% Similarity=0.175 Sum_probs=200.2
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|+++++.++||||+++++++.+.+..++||||+++
T Consensus 46 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 125 (350)
T 1rdq_E 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125 (350)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCC
Confidence 47899999999999995 469999999986532 3456788999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcccc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFL 505 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~ 505 (626)
|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++.........
T Consensus 126 g~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~~ 198 (350)
T 1rdq_E 126 GEMFSHLRR---IGRFSEPHARFYAAQIVLTFEYLH----SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTL 198 (350)
T ss_dssp CBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCC
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCcccccCccceEEECCCCCEEEcccccceeccCCcccc
Confidence 999999964 245899999999999999999999 5799999999999999999999999999998765555556
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
.+++.|++||+.....++.++|||||||++|||++|+.||... +..+....+....... +......+
T Consensus 199 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~-~~~~~~~~i~~~~~~~------------p~~~~~~~ 265 (350)
T 1rdq_E 199 CGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD-QPIQIYEKIVSGKVRF------------PSHFSSDL 265 (350)
T ss_dssp EECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCC------------CTTCCHHH
T ss_pred cCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCC-CHHHHHHHHHcCCCCC------------CCCCCHHH
Confidence 7899999999988888899999999999999999999999754 3334444443332110 11122347
Q ss_pred HHHHhhccCCCCCCCCC-----HHHHHH
Q 006903 586 LQVALRCINQSPNERPS-----MNQVAV 608 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs-----~~ev~~ 608 (626)
.+++.+||+.||++||+ ++|+++
T Consensus 266 ~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 266 KDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp HHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 88999999999999998 888865
No 81
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=6.6e-40 Score=363.60 Aligned_cols=249 Identities=22% Similarity=0.340 Sum_probs=204.6
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||+|.+.++..||||+++......++|.+|+++|++++||||+++++++.. +..++||||+++|+|.+
T Consensus 272 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~ 350 (535)
T 2h8h_A 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLD 350 (535)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHHH
T ss_pred heecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHHH
Confidence 47899999999999999888889999998776777899999999999999999999998765 67899999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc----cccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ----SFLA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~----~~~~ 506 (626)
+++.. ....+++..++.++.||+.||.||| +++|+||||||+|||+++++.+||+|||+++...... ....
T Consensus 351 ~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH----~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~ 425 (535)
T 2h8h_A 351 FLKGE-TGKYLRLPQLVDMAAQIASGMAYVE----RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 425 (535)
T ss_dssp HHSHH-HHTTCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTT
T ss_pred HHhhc-CCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCc
Confidence 99632 2245899999999999999999999 5799999999999999999999999999987543211 1223
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
++..|++||......++.++|||||||++|||+| |+.||... ...+....+.... ... ....+...+
T Consensus 426 ~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~-~~~~~~~~i~~~~-~~~----------~~~~~~~~l 493 (535)
T 2h8h_A 426 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGY-RMP----------CPPECPESL 493 (535)
T ss_dssp SCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC-CHHHHHHHHHTTC-CCC----------CCTTCCHHH
T ss_pred CcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHcCC-CCC----------CCCCCCHHH
Confidence 4567999999888888999999999999999999 88888643 3333333332221 111 111223458
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
.+++.+||+.||++|||+++|++.|+.+....
T Consensus 494 ~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 494 HDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred HHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 88999999999999999999999999986543
No 82
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.3e-39 Score=331.73 Aligned_cols=253 Identities=13% Similarity=0.139 Sum_probs=202.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|+++++.+ +|+|++++++++......++||||+ +++|
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L 92 (298)
T 1csn_A 15 GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSL 92 (298)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCH
Confidence 47899999999999994 679999999986533 345688999999999 7999999999999999999999999 9999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC-----eEEeeccCccccCCC--
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME-----PCISEYGLIVTENHD-- 501 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~-----~kl~DFGl~~~~~~~-- 501 (626)
.+++... ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++. +||+|||+++.....
T Consensus 93 ~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~ 166 (298)
T 1csn_A 93 EDLLDLC--GRKFSVKTVAMAAKQMLARVQSIH----EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVT 166 (298)
T ss_dssp HHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTT
T ss_pred HHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHH----hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccc
Confidence 9999743 346999999999999999999999 689999999999999987776 999999998653321
Q ss_pred --------ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCc--chhHHHHHHhhcccccccccHH
Q 006903 502 --------QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGF--NLATWVHSVVREEWTVEVFDEV 571 (626)
Q Consensus 502 --------~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~--~~~~~~~~~~~~~~~~~~~d~~ 571 (626)
.....++..|++||......++.++|||||||++|||+||+.||.... ...+....+........ .+
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~- 243 (298)
T 1csn_A 167 KQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTP--LR- 243 (298)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSC--HH-
T ss_pred cccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCcc--HH-
Confidence 123457889999999888888999999999999999999999997532 22222222211110000 00
Q ss_pred HHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccc
Q 006903 572 LIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618 (626)
Q Consensus 572 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~ 618 (626)
.........+.+++.+||+.||++|||+++|++.|+++.....
T Consensus 244 ----~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 244 ----ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp ----HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred ----HHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 0011223468899999999999999999999999999876543
No 83
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=5.3e-40 Score=337.35 Aligned_cols=256 Identities=21% Similarity=0.261 Sum_probs=196.0
Q ss_pred cccccccCCCcceEEEEe-----CCCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeC--CeEEEEE
Q 006903 350 PAELLGRGKHGSLYRVVL-----DDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSK--QEKLLVY 420 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~-----~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~--~~~~lv~ 420 (626)
..+.||+|+||.||+|++ .+++.||||+++... ...+.+.+|++++++++||||+++++++... ...++||
T Consensus 25 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 104 (302)
T 4e5w_A 25 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIM 104 (302)
T ss_dssp EEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEE
T ss_pred hhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEE
Confidence 357899999999999983 468999999997543 3447899999999999999999999999876 6689999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||+++|+|.+++.. ....+++..++.++.|++.||+||| +.+|+||||||+|||++.++.+||+|||++.....
T Consensus 105 e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 178 (302)
T 4e5w_A 105 EFLPSGSLKEYLPK--NKNKINLKQQLKYAVQICKGMDYLG----SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET 178 (302)
T ss_dssp ECCTTCBHHHHHHH--HTTTCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EeCCCCcHHHHHHh--ccccCCHHHHHHHHHHHHHHHHHhh----cCCcccCCCchheEEEcCCCCEEECcccccccccC
Confidence 99999999999953 2346899999999999999999999 57999999999999999999999999999875433
Q ss_pred Cc------cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccc---cccccHH
Q 006903 501 DQ------SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWT---VEVFDEV 571 (626)
Q Consensus 501 ~~------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~---~~~~d~~ 571 (626)
.. ....++..|++||......++.++||||||+++|||+||+.|+...... .......... .......
T Consensus 179 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 255 (302)
T 4e5w_A 179 DKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL---FLKMIGPTHGQMTVTRLVNT 255 (302)
T ss_dssp TCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH---HHHHHCSCCGGGHHHHHHHH
T ss_pred CCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhH---HhhccCCcccccCHHHHHHH
Confidence 22 2234566799999988777889999999999999999999886422110 0000000000 0000000
Q ss_pred HHh---hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 006903 572 LIA---EAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIK 614 (626)
Q Consensus 572 ~~~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~ 614 (626)
... ...+......+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 256 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 256 LKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 000 0011223346889999999999999999999999999874
No 84
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=2.1e-39 Score=332.39 Aligned_cols=252 Identities=22% Similarity=0.288 Sum_probs=197.4
Q ss_pred ccccccccCCCcceEEEEeCC----CcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEe-CCeEEEEEe
Q 006903 349 APAELLGRGKHGSLYRVVLDD----GLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCS-KQEKLLVYE 421 (626)
Q Consensus 349 ~~~~~lG~G~fG~Vy~~~~~~----g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~-~~~~~lv~E 421 (626)
...+.||+|+||.||+|...+ ...||+|.+..... ..+.+.+|++++++++||||+++++++.. ++..++|||
T Consensus 28 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e 107 (298)
T 3f66_A 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP 107 (298)
T ss_dssp EEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEE
T ss_pred hhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEe
Confidence 345789999999999998532 33689999876442 23578899999999999999999998654 567899999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD 501 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~ 501 (626)
|+++|+|.+++.. ....+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 108 ~~~~~~L~~~l~~--~~~~~~~~~~~~i~~ql~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 108 YMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKYLA----SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp CCTTCBHHHHHHC--TTCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred CCCCCCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCchheEEECCCCCEEECccccccccccc
Confidence 9999999999974 3456899999999999999999999 579999999999999999999999999998653221
Q ss_pred -------ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHh
Q 006903 502 -------QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIA 574 (626)
Q Consensus 502 -------~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 574 (626)
.....++..|++||......++.++||||||+++|||++|..|+..+.+..+.............
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 253 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-------- 253 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCC--------
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCC--------
Confidence 12234566799999988888899999999999999999965554433333333333322221110
Q ss_pred hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 575 EAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 575 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
+......+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 254 ---~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 293 (298)
T 3f66_A 254 ---PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 293 (298)
T ss_dssp ---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred ---CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 1112235888999999999999999999999999987654
No 85
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.9e-39 Score=331.89 Aligned_cols=251 Identities=18% Similarity=0.169 Sum_probs=195.0
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|.. .+++.||||+++..... .+.+.+|++++++++||||+++++++.+++..++||||+++
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~- 85 (292)
T 3o0g_A 7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ- 85 (292)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-
T ss_pred eeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-
Confidence 47899999999999995 46899999999754432 36788999999999999999999999999999999999986
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---Ccc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---DQS 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~~~ 503 (626)
++.+++.. ....+++..+..++.|++.||+||| +.||+||||||+|||++.++.+||+|||++..... ...
T Consensus 86 ~l~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH----~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 159 (292)
T 3o0g_A 86 DLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCH----SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYS 159 (292)
T ss_dssp EHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCC
T ss_pred CHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcccccc
Confidence 66665543 2356999999999999999999999 57999999999999999999999999999875432 223
Q ss_pred ccccccccchhhccccCC-CCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccc--ccccHH---------
Q 006903 504 FLAQTSSLKINDISNQMC-STIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTV--EVFDEV--------- 571 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~-~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~--~~~d~~--------- 571 (626)
...++..|++||...... ++.++|||||||++|||+||+.|+..+.+..+....+....... +.....
T Consensus 160 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 239 (292)
T 3o0g_A 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY 239 (292)
T ss_dssp SCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCC
T ss_pred CCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccccccc
Confidence 345688899999876554 79999999999999999999998766666555544443211000 000000
Q ss_pred ------HHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 572 ------LIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 572 ------~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.......+.....+.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0000011122345788999999999999999999976
No 86
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2.6e-39 Score=330.32 Aligned_cols=250 Identities=18% Similarity=0.234 Sum_probs=192.2
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|+..+|+.||+|++..... ..+.+.+|++++++++||||+++++++...+..++||||+++ +
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~ 85 (288)
T 1ob3_A 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-D 85 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-E
T ss_pred hhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-C
Confidence 478999999999999988899999999975432 336788999999999999999999999999999999999985 9
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---Cccc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---DQSF 504 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~~~~ 504 (626)
|.+++... ...+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||++..... ....
T Consensus 86 l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 159 (288)
T 1ob3_A 86 LKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCH----DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH 159 (288)
T ss_dssp HHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-------
T ss_pred HHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEEcCCCCEEEeECccccccCcccccccc
Confidence 99998642 356899999999999999999999 57999999999999999999999999999865332 1223
Q ss_pred cccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc---c----ccc----ccccHHH
Q 006903 505 LAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE---E----WTV----EVFDEVL 572 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~---~----~~~----~~~d~~~ 572 (626)
..++..|++||.... ..++.++|||||||++|||+||+.||....... ....+... . +.. ..+++..
T Consensus 160 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T 1ob3_A 160 EIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILGTPNSKNWPNVTELPKYDPNF 238 (288)
T ss_dssp --CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred ccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHHCCCChhhchhhhccccccccc
Confidence 456888999998754 457999999999999999999999997543322 22222110 0 000 0000000
Q ss_pred H------hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 573 I------AEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 573 ~------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
. ...........+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0 00001112345788999999999999999999975
No 87
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.3e-39 Score=338.02 Aligned_cols=251 Identities=20% Similarity=0.325 Sum_probs=189.7
Q ss_pred cccccccCCCcceEEEEeCC-C---cEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCeE------
Q 006903 350 PAELLGRGKHGSLYRVVLDD-G---LMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEK------ 416 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~~-g---~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~------ 416 (626)
..+.||+|+||.||+|.... + ..||||.++.... ..+.+.+|++++++++||||+++++++...+..
T Consensus 27 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 106 (323)
T 3qup_A 27 LGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIP 106 (323)
T ss_dssp EEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CE
T ss_pred EeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCcc
Confidence 35789999999999998543 3 2799999976432 236789999999999999999999999877655
Q ss_pred EEEEeecCCCChhHhhcCCC---CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeecc
Q 006903 417 LLVYEYQPNGSLFNLLHGSE---NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYG 493 (626)
Q Consensus 417 ~lv~Ey~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 493 (626)
++||||+++|+|.+++.... ....+++..++.++.|++.||.||| +.+|+||||||+|||+++++.+||+|||
T Consensus 107 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH----~~~ivH~Dikp~NIli~~~~~~kl~Dfg 182 (323)
T 3qup_A 107 MVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS----SRNFIHRDLAARNCMLAEDMTVCVADFG 182 (323)
T ss_dssp EEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECTTSCEEECCCC
T ss_pred EEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH----cCCcccCCCCcceEEEcCCCCEEEeecc
Confidence 99999999999999995322 2236899999999999999999999 5799999999999999999999999999
Q ss_pred CccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhccccccc
Q 006903 494 LIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEV 567 (626)
Q Consensus 494 l~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 567 (626)
+++...... ....++..|++||......++.++|||||||++|||+| |+.||.... ..+............
T Consensus 183 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~-~~~~~~~~~~~~~~~-- 259 (323)
T 3qup_A 183 LSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIE-NAEIYNYLIGGNRLK-- 259 (323)
T ss_dssp C-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-GGGHHHHHHTTCCCC--
T ss_pred ccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccC-hHHHHHHHhcCCCCC--
Confidence 986533221 12334567999999888889999999999999999999 888886433 223333332222111
Q ss_pred ccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 568 FDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 568 ~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
........+.+++.+||+.||++|||+.++++.|+++...
T Consensus 260 ---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~ 299 (323)
T 3qup_A 260 ---------QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH 299 (323)
T ss_dssp ---------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ---------CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 1112234588999999999999999999999999998654
No 88
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=3.5e-39 Score=339.14 Aligned_cols=245 Identities=19% Similarity=0.280 Sum_probs=196.6
Q ss_pred cccccccCCCcceEEEEe-CCCcEEEEEEcCCC------CCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 350 PAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDW------SISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~------~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|+++++.++||||+++++++...+..++||||
T Consensus 28 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 107 (351)
T 3c0i_A 28 LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEF 107 (351)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeC
Confidence 357899999999999985 57999999998532 12467899999999999999999999999999999999999
Q ss_pred cCCCChhHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC---eEEeeccCcccc
Q 006903 423 QPNGSLFNLLHGS-ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME---PCISEYGLIVTE 498 (626)
Q Consensus 423 ~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGl~~~~ 498 (626)
+++|+|.+++... .....+++..+..++.|++.||.||| +++|+||||||+|||++.++. +||+|||++...
T Consensus 108 ~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH----~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~ 183 (351)
T 3c0i_A 108 MDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH----DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183 (351)
T ss_dssp CSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred CCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH----HCCceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence 9999998887532 12346899999999999999999999 579999999999999987654 999999998764
Q ss_pred CCCc---cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhh
Q 006903 499 NHDQ---SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 499 ~~~~---~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
.... ....+++.|++||......++.++|||||||++|||+||+.||.... .+....+....... .+...
T Consensus 184 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~i~~~~~~~---~~~~~-- 256 (351)
T 3c0i_A 184 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGIIKGKYKM---NPRQW-- 256 (351)
T ss_dssp CTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH--HHHHHHHHHTCCCC---CHHHH--
T ss_pred cCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH--HHHHHHHHcCCCCC---Ccccc--
Confidence 4322 23467889999999988888999999999999999999999997532 22233332222111 11100
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 576 AASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
......+.+++.+||+.||++|||+.|+++
T Consensus 257 ---~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 257 ---SHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp ---TTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---ccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 112335788999999999999999999986
No 89
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.6e-39 Score=337.61 Aligned_cols=251 Identities=18% Similarity=0.280 Sum_probs=200.0
Q ss_pred cccccccCCCcceEEEEe--------CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEE
Q 006903 350 PAELLGRGKHGSLYRVVL--------DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLL 418 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~--------~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~l 418 (626)
..+.||+|+||.||+|.. .++..||||+++.... ..+.+.+|+++++++ +||||+++++++...+..++
T Consensus 39 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 118 (334)
T 2pvf_A 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 118 (334)
T ss_dssp EEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEE
T ss_pred EeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEE
Confidence 357899999999999985 3577899999976542 235688999999999 89999999999999999999
Q ss_pred EEeecCCCChhHhhcCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC
Q 006903 419 VYEYQPNGSLFNLLHGSEN-------------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM 485 (626)
Q Consensus 419 v~Ey~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~ 485 (626)
||||+++|+|.+++..... ...+++..++.++.|++.||.||| +.+|+||||||+|||++.++
T Consensus 119 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~ 194 (334)
T 2pvf_A 119 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA----SQKCIHRDLAARNVLVTENN 194 (334)
T ss_dssp EEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTC
T ss_pred EEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCccceEEEcCCC
Confidence 9999999999999975331 134899999999999999999999 57999999999999999999
Q ss_pred CeEEeeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHh
Q 006903 486 EPCISEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVV 559 (626)
Q Consensus 486 ~~kl~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~ 559 (626)
.+||+|||++....... ....++..|++||......++.++|||||||++|||+| |+.||... +..+....+.
T Consensus 195 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~-~~~~~~~~~~ 273 (334)
T 2pvf_A 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEELFKLLK 273 (334)
T ss_dssp CEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC-CHHHHHHHHH
T ss_pred CEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC-CHHHHHHHHh
Confidence 99999999987543321 22334567999998877778999999999999999999 99888643 3333333332
Q ss_pred hcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 560 REEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 560 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.... .. ........+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 274 ~~~~-~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~ 319 (334)
T 2pvf_A 274 EGHR-MD----------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319 (334)
T ss_dssp HTCC-CC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCC-CC----------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 2211 11 1112234588899999999999999999999999998653
No 90
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=342.77 Aligned_cols=238 Identities=18% Similarity=0.265 Sum_probs=194.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|.++++.+ +||||+++++++.+.+..|+||||++
T Consensus 28 ~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 107 (353)
T 3txo_A 28 IRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVN 107 (353)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCC
Confidence 47899999999999985 468999999997532 3445688999999988 79999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---C
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---D 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~ 501 (626)
+|+|.+++.. ...+++..+..++.|++.||.||| +++|+||||||+|||++.++.+||+|||+++.... .
T Consensus 108 gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH----~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~ 180 (353)
T 3txo_A 108 GGDLMFHIQK---SRRFDEARARFYAAEIISALMFLH----DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT 180 (353)
T ss_dssp SCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC----
T ss_pred CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCCcccCCCHHHEEECCCCCEEEccccceeecccCCcc
Confidence 9999999963 246999999999999999999999 57999999999999999999999999999875322 2
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
.....+++.|++||+.....++.++|||||||++|||+||+.||... +..+....+....... +...
T Consensus 181 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~-~~~~~~~~i~~~~~~~------------p~~~ 247 (353)
T 3txo_A 181 TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE-NEDDLFEAILNDEVVY------------PTWL 247 (353)
T ss_dssp -----CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCC------------CTTS
T ss_pred ccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCC-CHHHHHHHHHcCCCCC------------CCCC
Confidence 23456889999999988888899999999999999999999999754 3344444444332211 1112
Q ss_pred HHHHHHHHhhccCCCCCCCCCH------HHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSM------NQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~------~ev~~ 608 (626)
...+.+++.+||+.||++||++ +|+++
T Consensus 248 ~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 248 HEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp CHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 2347789999999999999998 67765
No 91
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2.9e-39 Score=340.99 Aligned_cols=242 Identities=16% Similarity=0.217 Sum_probs=188.8
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
.+.||+|+||.||+++.. +++.||||++.......+.+.+|+.+++.++||||+++++++.+.+..++||||+++|+|.
T Consensus 25 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~ 104 (361)
T 3uc3_A 25 VKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELY 104 (361)
T ss_dssp EEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHH
T ss_pred EEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHH
Confidence 478999999999999954 7999999999876666688999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC--eEEeeccCccccC--CCcccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME--PCISEYGLIVTEN--HDQSFL 505 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~--~kl~DFGl~~~~~--~~~~~~ 505 (626)
+++.. ...+++..+..++.|++.||.||| +.||+||||||+|||++.++. +||+|||+++... ......
T Consensus 105 ~~l~~---~~~~~~~~~~~i~~ql~~~L~~LH----~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 177 (361)
T 3uc3_A 105 ERICN---AGRFSEDEARFFFQQLLSGVSYCH----SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST 177 (361)
T ss_dssp HHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC------------
T ss_pred HHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCCC
Confidence 99953 246899999999999999999999 579999999999999987765 9999999986422 222345
Q ss_pred ccccccchhhccccCCCCCc-chhHHHHHHHHHHHcCCCCCCCCcc---hhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 506 AQTSSLKINDISNQMCSTIK-ADVYGFGVILLELLTGKLVQNNGFN---LATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k-~DVwSfGvvl~elltg~~p~~~~~~---~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
.++..|++||......++.+ +|||||||++|||++|+.||..... ................ + ....
T Consensus 178 ~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~--~--------~~~~ 247 (361)
T 3uc3_A 178 VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIP--D--------DIRI 247 (361)
T ss_dssp ---CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCC--T--------TSCC
T ss_pred cCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCC--C--------cCCC
Confidence 67889999998876666555 8999999999999999999974332 2222222222211110 0 0011
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
...+.+++.+||+.||++|||+.|+++.
T Consensus 248 s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 248 SPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp CHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 2347889999999999999999999874
No 92
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=7.6e-40 Score=340.36 Aligned_cols=247 Identities=21% Similarity=0.282 Sum_probs=194.5
Q ss_pred ccccccCCCcceEEEEe-CCCcE----EEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLM----LAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~----vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.+.||+|+||.||+|.. .+++. ||+|.+.... ...+.+.+|+.++++++||||+++++++. .+..++||||+
T Consensus 18 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 96 (325)
T 3kex_A 18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYL 96 (325)
T ss_dssp EEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEECC
T ss_pred eeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEeC
Confidence 47899999999999985 44543 8888876443 23356789999999999999999999875 56789999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc-
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ- 502 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~- 502 (626)
++|+|.+++... ...+++..++.++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 97 ~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 170 (325)
T 3kex_A 97 PLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLE----EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK 170 (325)
T ss_dssp TTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHH----HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTT
T ss_pred CCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHH----hCCCCCCccchheEEECCCCeEEECCCCcccccCcccc
Confidence 999999999742 347899999999999999999999 5799999999999999999999999999987543221
Q ss_pred ----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhc
Q 006903 503 ----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 503 ----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
....++..|++||......++.++|||||||++|||+| |+.||.... ..+........... ..
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-~~~~~~~~~~~~~~-~~---------- 238 (325)
T 3kex_A 171 QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR-LAEVPDLLEKGERL-AQ---------- 238 (325)
T ss_dssp CCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC-TTHHHHHHHTTCBC-CC----------
T ss_pred cccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccC-HHHHHHHHHcCCCC-CC----------
Confidence 23445668999999988889999999999999999999 999987432 22222222221111 00
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 578 SEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
+......+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 239 ~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 239 PQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp CTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred CCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 011122477889999999999999999999999988654
No 93
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.3e-39 Score=330.29 Aligned_cols=239 Identities=16% Similarity=0.235 Sum_probs=187.8
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC---------------------------CHHHHHHHHHHhccCCCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI---------------------------SSEDFKNRMQKIDHVKHPN 402 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---------------------------~~~~~~~ei~~l~~l~H~n 402 (626)
.+.||+|+||.||+|.. .+++.||||++..... ..+.+.+|++++++++|||
T Consensus 18 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 97 (298)
T 2zv2_A 18 KDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPN 97 (298)
T ss_dssp EEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTT
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCC
Confidence 47899999999999985 5689999999865431 1246889999999999999
Q ss_pred ccccceEEEe--CCeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCee
Q 006903 403 VLPPLAYYCS--KQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNIL 480 (626)
Q Consensus 403 Iv~l~g~~~~--~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NIL 480 (626)
|+++++++.. .+..++||||+++|+|.+++. ...+++..+..++.|++.||.||| +.+|+||||||+|||
T Consensus 98 iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dlkp~Nil 169 (298)
T 2zv2_A 98 VVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT----LKPLSEDQARFYFQDLIKGIEYLH----YQKIIHRDIKPSNLL 169 (298)
T ss_dssp BCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC----SSCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEE
T ss_pred CCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHEE
Confidence 9999999986 567899999999999988763 246999999999999999999999 579999999999999
Q ss_pred eCCCCCeEEeeccCccccCCCc---cccccccccchhhccccCC---CCCcchhHHHHHHHHHHHcCCCCCCCCcchhHH
Q 006903 481 FNNNMEPCISEYGLIVTENHDQ---SFLAQTSSLKINDISNQMC---STIKADVYGFGVILLELLTGKLVQNNGFNLATW 554 (626)
Q Consensus 481 l~~~~~~kl~DFGl~~~~~~~~---~~~~~~~~~~~pe~~~~~~---~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~ 554 (626)
++.++.+||+|||++....... ....++..|++||...... ++.++|||||||++|||++|+.||.... ...+
T Consensus 170 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~-~~~~ 248 (298)
T 2zv2_A 170 VGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER-IMCL 248 (298)
T ss_dssp ECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS-HHHH
T ss_pred ECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc-HHHH
Confidence 9999999999999987543322 2346788999999886554 3678999999999999999999997542 2233
Q ss_pred HHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 555 VHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 555 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
...+........ + .......+.+++.+||+.||++|||+.|+++
T Consensus 249 ~~~~~~~~~~~~--~--------~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 249 HSKIKSQALEFP--D--------QPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHHHHHCCCCCC--S--------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHhcccCCCC--C--------ccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 322222211100 0 0112234788999999999999999999875
No 94
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2e-39 Score=329.20 Aligned_cols=248 Identities=23% Similarity=0.371 Sum_probs=202.3
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChhH
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~ 430 (626)
.+.||+|+||.||+|...++..||||.++......+.+.+|++++++++||||+++++++. .+..++||||+++|+|.+
T Consensus 18 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~ 96 (279)
T 1qpc_A 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVD 96 (279)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHH
T ss_pred eeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCCCCHHH
Confidence 4789999999999999888889999999877677889999999999999999999999876 456899999999999999
Q ss_pred hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc----cccc
Q 006903 431 LLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ----SFLA 506 (626)
Q Consensus 431 ~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~----~~~~ 506 (626)
++... ....+++..+..++.|++.||.||| +.+|+||||||+||++++++.+||+|||++....... ....
T Consensus 97 ~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 171 (279)
T 1qpc_A 97 FLKTP-SGIKLTINKLLDMAAQIAEGMAFIE----ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK 171 (279)
T ss_dssp HTTSH-HHHTCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCC
T ss_pred HHhcC-CCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCC
Confidence 99631 1226899999999999999999999 5799999999999999999999999999987543322 1223
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
++..|++||......++.++||||||+++|||+| |+.||... ...+......... ... ........+
T Consensus 172 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-~~~~~~~~~~~~~-~~~----------~~~~~~~~l 239 (279)
T 1qpc_A 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGY-RMV----------RPDNCPEEL 239 (279)
T ss_dssp CCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTC-CHHHHHHHHHTTC-CCC----------CCTTCCHHH
T ss_pred CccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCccc-CHHHHHHHHhccc-CCC----------CcccccHHH
Confidence 4567999999877778899999999999999999 88888643 2233333322221 110 011123458
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.+++.+||+.||++|||+.++++.|+++...
T Consensus 240 ~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 240 YQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 8899999999999999999999999998654
No 95
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.2e-39 Score=344.86 Aligned_cols=234 Identities=17% Similarity=0.266 Sum_probs=189.6
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.++||+|+||.||+|+. .+++.||+|++++... ..+.+.+|..++.++ +|||||++++++.+.+..++||||++
T Consensus 57 ~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~ 136 (396)
T 4dc2_A 57 LRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 136 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCC
Confidence 47899999999999995 4688999999976432 224578899998876 89999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcccc---CCC
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTE---NHD 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~---~~~ 501 (626)
+|+|.+++.. ...+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++.. ...
T Consensus 137 gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH----~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~ 209 (396)
T 4dc2_A 137 GGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLH----ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT 209 (396)
T ss_dssp TCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCC
T ss_pred CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCEEeccCCHHHEEECCCCCEEEeecceeeecccCCCc
Confidence 9999999963 246999999999999999999999 579999999999999999999999999998752 222
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcc-------hhH-HHHHHhhcccccccccHHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFN-------LAT-WVHSVVREEWTVEVFDEVLI 573 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~-------~~~-~~~~~~~~~~~~~~~d~~~~ 573 (626)
.....+++.|++||+.....++.++|||||||++|||++|+.||..... ..+ ....+......
T Consensus 210 ~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~--------- 280 (396)
T 4dc2_A 210 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR--------- 280 (396)
T ss_dssp BCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCC---------
T ss_pred cccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccC---------
Confidence 3445789999999999888899999999999999999999999963211 111 11222211110
Q ss_pred hhhccHHHHHHHHHHHhhccCCCCCCCCCH
Q 006903 574 AEAASEERMLKLLQVALRCINQSPNERPSM 603 (626)
Q Consensus 574 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 603 (626)
.+......+.+++.+||+.||++||++
T Consensus 281 ---~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 281 ---IPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp ---CCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred ---CCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 111123357889999999999999996
No 96
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=4.2e-39 Score=348.28 Aligned_cols=242 Identities=17% Similarity=0.232 Sum_probs=196.1
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|. ..+|+.||+|++...... .+.+.+|+++++.++||||+++++++.+++..++||||+++|
T Consensus 16 ~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg 95 (444)
T 3soa_A 16 FEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGG 95 (444)
T ss_dssp EEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCC
T ss_pred EEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCC
Confidence 5789999999999998 457999999999765432 356889999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeC---CCCCeEEeeccCccccCCCc-
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFN---NNMEPCISEYGLIVTENHDQ- 502 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~---~~~~~kl~DFGl~~~~~~~~- 502 (626)
+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++ +++.+||+|||++.......
T Consensus 96 ~L~~~i~~---~~~~~e~~~~~i~~qil~aL~~lH----~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~ 168 (444)
T 3soa_A 96 ELFEDIVA---REYYSEADASHCIQQILEAVLHCH----QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ 168 (444)
T ss_dssp BHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCC
T ss_pred CHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCc
Confidence 99999964 246899999999999999999999 57999999999999998 46789999999987544322
Q ss_pred --cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHH
Q 006903 503 --SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 503 --~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
....+++.|++||......++.++||||+||++|||++|+.||.... ..+....+........ .+ ....
T Consensus 169 ~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~-~~~~~~~i~~~~~~~~--~~------~~~~ 239 (444)
T 3soa_A 169 AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED-QHRLYQQIKAGAYDFP--SP------EWDT 239 (444)
T ss_dssp BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHHHHHTCCCCC--TT------TTTT
T ss_pred eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc-HHHHHHHHHhCCCCCC--cc------cccc
Confidence 23568899999999988888999999999999999999999997543 3333333333221111 00 0011
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 581 RMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
....+.+++.+||+.||++|||+.|+++
T Consensus 240 ~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 240 VTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 2235788999999999999999999987
No 97
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.4e-39 Score=341.24 Aligned_cols=251 Identities=17% Similarity=0.238 Sum_probs=196.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCC-----CCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK-----HPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~-----H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|+. .+++.||||+++......+.+..|+++++.++ ||||+++++++...+..++||||+
T Consensus 40 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~- 118 (360)
T 3llt_A 40 IRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL- 118 (360)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-
T ss_pred EEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-
Confidence 47899999999999995 57899999999764444567888999998886 999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC---------------------
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN--------------------- 483 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~--------------------- 483 (626)
+++|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+|||++.
T Consensus 119 ~~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~ 193 (360)
T 3llt_A 119 GPSLYEIITRN-NYNGFHIEDIKLYCIEILKALNYLR----KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQI 193 (360)
T ss_dssp CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEE
T ss_pred CCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeeCCCCcccEEEccccccccccchhcccccccccc
Confidence 89999999753 2346899999999999999999999 679999999999999985
Q ss_pred ----CCCeEEeeccCccccCCCccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHh
Q 006903 484 ----NMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVV 559 (626)
Q Consensus 484 ----~~~~kl~DFGl~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~ 559 (626)
++.+||+|||++...........++..|++||......++.++|||||||++|||+||+.||...... +....+.
T Consensus 194 ~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~~~ 272 (360)
T 3llt_A 194 YRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHM-EHLAMME 272 (360)
T ss_dssp EEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHH
T ss_pred cccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHH-HHHHHHH
Confidence 78899999999987655555567888999999998888999999999999999999999999754322 2111111
Q ss_pred hc--ccccccccHH-----------------HHhhh---------------ccHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 006903 560 RE--EWTVEVFDEV-----------------LIAEA---------------ASEERMLKLLQVALRCINQSPNERPSMNQ 605 (626)
Q Consensus 560 ~~--~~~~~~~d~~-----------------~~~~~---------------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~e 605 (626)
.. .......... ..... ........+.+++.+||+.||++|||++|
T Consensus 273 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~e 352 (360)
T 3llt_A 273 SIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAE 352 (360)
T ss_dssp HHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred HhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHH
Confidence 10 0000000000 00000 00001145779999999999999999999
Q ss_pred HHH
Q 006903 606 VAV 608 (626)
Q Consensus 606 v~~ 608 (626)
+++
T Consensus 353 lL~ 355 (360)
T 3llt_A 353 LLK 355 (360)
T ss_dssp HTT
T ss_pred Hhc
Confidence 975
No 98
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3e-39 Score=329.60 Aligned_cols=252 Identities=19% Similarity=0.239 Sum_probs=202.6
Q ss_pred cccccCCCcceEEEEeC---CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 352 ELLGRGKHGSLYRVVLD---DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~---~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
+.||+|+||.||+|... ++..||||.++.... ..+.+.+|++++++++||||+++++++ ..+..++||||+++|
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 94 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGG 94 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCC
Confidence 48999999999999853 578899999986532 346789999999999999999999998 556799999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc----
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ---- 502 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~---- 502 (626)
+|.+++.. ....+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 95 ~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 168 (287)
T 1u59_A 95 PLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLE----EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 168 (287)
T ss_dssp EHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEEC
T ss_pred CHHHHHHh--CCccCCHHHHHHHHHHHHHHHHHHH----HCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceee
Confidence 99999963 3456999999999999999999999 5799999999999999999999999999987543222
Q ss_pred --cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccH
Q 006903 503 --SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASE 579 (626)
Q Consensus 503 --~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 579 (626)
....++..|++||......++.++|||||||++|||+| |+.||..... .+....+..... .. .+.
T Consensus 169 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-~~~~~~i~~~~~-~~----------~~~ 236 (287)
T 1u59_A 169 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-PEVMAFIEQGKR-ME----------CPP 236 (287)
T ss_dssp CCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT-HHHHHHHHTTCC-CC----------CCT
T ss_pred ccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH-HHHHHHHhcCCc-CC----------CCC
Confidence 12234677999999887778999999999999999999 9999875332 233222222211 11 111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccccccc
Q 006903 580 ERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEERSIS 622 (626)
Q Consensus 580 ~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~~~~~ 622 (626)
.....+.+++.+||+.||++||++.|+++.|+++..+......
T Consensus 237 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~~ 279 (287)
T 1u59_A 237 ECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVE 279 (287)
T ss_dssp TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTCS
T ss_pred CcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCccc
Confidence 2234588899999999999999999999999999876554443
No 99
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=9.2e-40 Score=338.68 Aligned_cols=260 Identities=20% Similarity=0.261 Sum_probs=198.8
Q ss_pred ccccccCCCcceEEEEeC-----CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeC--CeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVVLD-----DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSK--QEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-----~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~--~~~~lv~E 421 (626)
.+.||+|+||.||++.+. +++.||||+++.... ..+.+.+|++++++++||||+++++++... ...++|||
T Consensus 36 ~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 115 (318)
T 3lxp_A 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVME 115 (318)
T ss_dssp EEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEEC
T ss_pred hheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEe
Confidence 478999999999998642 688999999986542 235689999999999999999999999874 57899999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD 501 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~ 501 (626)
|+++|+|.+++.. ..+++..++.++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++......
T Consensus 116 ~~~~~~L~~~l~~----~~~~~~~~~~i~~~l~~~l~~LH----~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 116 YVPLGSLRDYLPR----HSIGLAQLLLFAQQICEGMAYLH----AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp CCTTCBHHHHGGG----SCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred cccCCcHHHHHhh----CCCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 9999999999964 24899999999999999999999 579999999999999999999999999998764332
Q ss_pred c------cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHH--
Q 006903 502 Q------SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLI-- 573 (626)
Q Consensus 502 ~------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-- 573 (626)
. ....++..|++||......++.++|||||||++|||+||+.||..........................+.
T Consensus 188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG 267 (318)
T ss_dssp CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcc
Confidence 2 22345667999999887778899999999999999999999986321100000000000000000000000
Q ss_pred -hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccc
Q 006903 574 -AEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618 (626)
Q Consensus 574 -~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~ 618 (626)
...........+.+++.+||+.||++|||+.|+++.|+.+.+...
T Consensus 268 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 313 (318)
T 3lxp_A 268 ERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313 (318)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred cCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence 000112234468899999999999999999999999999987654
No 100
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=5e-39 Score=341.83 Aligned_cols=244 Identities=20% Similarity=0.298 Sum_probs=198.5
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|.. .+|+.||+|.+.... .....+.+|+++++.++||||+++++++.+.+..++||||+++|+|
T Consensus 56 ~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L 135 (387)
T 1kob_A 56 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGEL 135 (387)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBH
T ss_pred EEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcH
Confidence 47899999999999985 468999999987644 2345789999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC--CCCeEEeeccCccccCCCc--cc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN--NMEPCISEYGLIVTENHDQ--SF 504 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~--~~~~kl~DFGl~~~~~~~~--~~ 504 (626)
.+++.. ....+++..+..++.|++.||.||| +.+|+||||||+|||++. ++.+||+|||+++...... ..
T Consensus 136 ~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH----~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~ 209 (387)
T 1kob_A 136 FDRIAA--EDYKMSEAEVINYMRQACEGLKHMH----EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV 209 (387)
T ss_dssp HHHTTC--TTCCBCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEE
T ss_pred HHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHH----hCCeeecccchHHeEEecCCCCceEEEecccceecCCCcceee
Confidence 999963 2346899999999999999999999 579999999999999974 5779999999987644322 33
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK 584 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 584 (626)
..++..|++||......++.++|||||||++|||+||+.||..... .+....+....+... .. ........
T Consensus 210 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-~~~~~~i~~~~~~~~---~~-----~~~~~s~~ 280 (387)
T 1kob_A 210 TTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD-LETLQNVKRCDWEFD---ED-----AFSSVSPE 280 (387)
T ss_dssp ECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-HHHHHHHHHCCCCCC---SS-----TTTTSCHH
T ss_pred eccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH-HHHHHHHHhCCCCCC---cc-----ccccCCHH
Confidence 4678899999999888889999999999999999999999975432 333333333222111 00 00112335
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 585 LLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 585 l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
+.+++.+||+.||++|||+.|+++.
T Consensus 281 ~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 281 AKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHcCCChhHCcCHHHHhhC
Confidence 7889999999999999999999873
No 101
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.8e-39 Score=339.97 Aligned_cols=237 Identities=19% Similarity=0.283 Sum_probs=195.2
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|+. .+|+.||||+++... ...+.+..|.+++..+ +||||+++++++.+.+..|+||||++
T Consensus 22 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 101 (345)
T 1xjd_A 22 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLN 101 (345)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCC
Confidence 47899999999999996 468999999997542 3456688899998876 99999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC---CC
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN---HD 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~---~~ 501 (626)
+|+|.+++.. ...+++..+..++.|++.||.||| ++||+||||||+|||++.++.+||+|||+++... ..
T Consensus 102 gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~ 174 (345)
T 1xjd_A 102 GGDLMYHIQS---CHKFDLSRATFYAAEIILGLQFLH----SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK 174 (345)
T ss_dssp TCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCC
T ss_pred CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCc
Confidence 9999999963 246899999999999999999999 5799999999999999999999999999987532 22
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
.....+++.|++||......++.++|||||||++|||++|+.||... +..+....+....... +...
T Consensus 175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~-~~~~~~~~i~~~~~~~------------p~~~ 241 (345)
T 1xjd_A 175 TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ-DEEELFHSIRMDNPFY------------PRWL 241 (345)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCC------------CTTS
T ss_pred ccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCC-CHHHHHHHHHhCCCCC------------Cccc
Confidence 33456889999999998888899999999999999999999999743 3333333333322110 1111
Q ss_pred HHHHHHHHhhccCCCCCCCCCHH-HHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMN-QVA 607 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~-ev~ 607 (626)
...+.+++.+||+.||++||++. |+.
T Consensus 242 s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 242 EKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp CHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred CHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 23478899999999999999997 664
No 102
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=340.11 Aligned_cols=256 Identities=25% Similarity=0.346 Sum_probs=189.9
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHH--HHHHHhccCCCCCccccceEEEe-----CCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFK--NRMQKIDHVKHPNVLPPLAYYCS-----KQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~--~ei~~l~~l~H~nIv~l~g~~~~-----~~~~~lv~Ey~ 423 (626)
.+.||+|+||.||+|+. +++.||||++.... ...+. .|+..+..++||||+++++++.. ....++||||+
T Consensus 18 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~ 94 (336)
T 3g2f_A 18 LELIGRGRYGAVYKGSL-DERPVAVKVFSFAN--RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYY 94 (336)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCC
T ss_pred eeecccCCCeEEEEEEE-CCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecC
Confidence 47899999999999987 68999999986533 33444 44445666899999999986543 23578999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCC---------CceeccCCCCCeeeCCCCCeEEeeccC
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELRED---------GIAHGNLKSNNILFNNNMEPCISEYGL 494 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~---------~ivHrDlkp~NILl~~~~~~kl~DFGl 494 (626)
++|+|.+++... ..++..+..++.|++.||.||| +. +|+||||||+|||++.++.+||+|||+
T Consensus 95 ~~g~L~~~l~~~----~~~~~~~~~i~~qi~~~L~~LH----~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~ 166 (336)
T 3g2f_A 95 PNGSLXKYLSLH----TSDWVSSCRLAHSVTRGLAYLH----TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGL 166 (336)
T ss_dssp TTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHH----CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTT
T ss_pred CCCcHHHHHhhc----ccchhHHHHHHHHHHHHHHHHH----hhhccccccccceeecccccceEEEcCCCcEEEeeccc
Confidence 999999999642 3589999999999999999999 55 999999999999999999999999999
Q ss_pred ccccCCC-----------ccccccccccchhhcccc-------CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHH--
Q 006903 495 IVTENHD-----------QSFLAQTSSLKINDISNQ-------MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATW-- 554 (626)
Q Consensus 495 ~~~~~~~-----------~~~~~~~~~~~~pe~~~~-------~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~-- 554 (626)
++..... .....++..|++||.... ..++.++|||||||++|||+||..|+..+....++
T Consensus 167 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~ 246 (336)
T 3g2f_A 167 SMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQM 246 (336)
T ss_dssp CEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCC
T ss_pred eeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHH
Confidence 8653321 112357889999998765 34467899999999999999998876533221110
Q ss_pred --------------HHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccccc
Q 006903 555 --------------VHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEERS 620 (626)
Q Consensus 555 --------------~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~~~ 620 (626)
.............+... ..........+.+++.+||+.||++|||++|+++.|+++.....+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~ 323 (336)
T 3g2f_A 247 AFQTEVGNHPTFEDMQVLVSREKQRPKFPEA---WKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERN 323 (336)
T ss_dssp TTHHHHCSSCCHHHHHHHHTTSCCCCCCCTT---CCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC-
T ss_pred hhhcccCCCchHHHHHhhhcccccCCCCCcc---cccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhc
Confidence 00111100000000000 0011234557999999999999999999999999999998765544
No 103
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.4e-39 Score=330.37 Aligned_cols=248 Identities=20% Similarity=0.318 Sum_probs=193.6
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeC-CeEEEEEeecCCCChh
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSK-QEKLLVYEYQPNGSLF 429 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~-~~~~lv~Ey~~~g~L~ 429 (626)
.+.||+|+||.||++... |+.||||.++.. ...+.+.+|++++++++||||+++++++... +..++||||+++|+|.
T Consensus 26 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~ 103 (278)
T 1byg_A 26 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKND-ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 103 (278)
T ss_dssp EEEEEECSSCEEEEEEET-TEEEEEEECCCC-C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHH
T ss_pred EeEEecCCCceEEEEEEc-CCEEEEEEecch-hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHH
Confidence 478999999999999874 889999999754 3557899999999999999999999987654 4689999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcccccccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTS 509 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~~~~~ 509 (626)
+++... ....+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++...........++.
T Consensus 104 ~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 178 (278)
T 1byg_A 104 DYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLE----GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 178 (278)
T ss_dssp HHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECTTSCEEECCCCC------------CCT
T ss_pred HHHHhc-ccccCCHHHHHHHHHHHHHHHHHHH----hCCccccCCCcceEEEeCCCcEEEeeccccccccccccCCCccc
Confidence 999632 1123789999999999999999999 57999999999999999999999999999876544444445677
Q ss_pred ccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHH
Q 006903 510 SLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQV 588 (626)
Q Consensus 510 ~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l 588 (626)
.|++||......++.++||||||+++|||+| |+.||... +..+......... ... ........+.++
T Consensus 179 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~-~~~~~~~~~~~~~-~~~----------~~~~~~~~l~~l 246 (278)
T 1byg_A 179 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-PLKDVVPRVEKGY-KMD----------APDGCPPAVYEV 246 (278)
T ss_dssp TTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS-CGGGHHHHHTTTC-CCC----------CCTTCCHHHHHH
T ss_pred cccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHhcCC-CCC----------CcccCCHHHHHH
Confidence 8999999888888999999999999999999 99988643 2223332222211 111 111223458889
Q ss_pred HhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 589 ALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 589 ~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
+.+||+.||++|||+.|+++.|++++..+
T Consensus 247 i~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 247 MKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 99999999999999999999999987643
No 104
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.1e-38 Score=329.50 Aligned_cols=251 Identities=19% Similarity=0.313 Sum_probs=191.7
Q ss_pred cccccccCCCcceEEEEeC----CCcEEEEEEcCCCCCCH---HHHHHHHHHhccCCCCCccccceEEEeCCe-----EE
Q 006903 350 PAELLGRGKHGSLYRVVLD----DGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVLPPLAYYCSKQE-----KL 417 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~----~g~~vAvK~l~~~~~~~---~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~-----~~ 417 (626)
..+.||+|+||.||+|... ++..||+|.++...... +.+.+|++++++++||||+++++++...+. .+
T Consensus 38 ~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 117 (313)
T 3brb_A 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPM 117 (313)
T ss_dssp EEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEE
T ss_pred eccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccE
Confidence 4578999999999999743 35689999997654333 568899999999999999999999887553 49
Q ss_pred EEEeecCCCChhHhhcCC---CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccC
Q 006903 418 LVYEYQPNGSLFNLLHGS---ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGL 494 (626)
Q Consensus 418 lv~Ey~~~g~L~~~l~~~---~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl 494 (626)
+||||+++|+|.+++... .....+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 118 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~dikp~NIli~~~~~~kl~Dfg~ 193 (313)
T 3brb_A 118 VILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS----NRNFLHRDLAARNCMLRDDMTVCVADFGL 193 (313)
T ss_dssp EEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH----TTTCCCCCCSGGGEEECTTSCEEECSCSC
T ss_pred EEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCcceEEEcCCCcEEEeecCc
Confidence 999999999999998432 23357999999999999999999999 68999999999999999999999999999
Q ss_pred ccccCCC-----ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccc
Q 006903 495 IVTENHD-----QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVF 568 (626)
Q Consensus 495 ~~~~~~~-----~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 568 (626)
+...... .....++..|++||......++.++||||||+++|||+| |+.||.... ..+........... .
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-~~~~~~~~~~~~~~-~-- 269 (313)
T 3brb_A 194 SKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQ-NHEMYDYLLHGHRL-K-- 269 (313)
T ss_dssp C----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-GGGHHHHHHTTCCC-C--
T ss_pred ceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCC-HHHHHHHHHcCCCC-C--
Confidence 8653221 123345667999999888888999999999999999999 788876432 22333322222111 1
Q ss_pred cHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 569 DEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 569 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
........+.+++.+||+.||++|||+.++++.|+++...
T Consensus 270 --------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 270 --------QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp --------CBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --------CCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 1112234588899999999999999999999999998753
No 105
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=4.6e-39 Score=337.23 Aligned_cols=234 Identities=18% Similarity=0.262 Sum_probs=189.6
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC----HHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS----SEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~----~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|+. .+++.||+|+++..... .+.+.+|+.++.++ +||||+++++++.+.+..++||||++
T Consensus 14 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~ 93 (345)
T 3a8x_A 14 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 93 (345)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCC
Confidence 47899999999999995 46899999999765422 24578899999887 89999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC---CC
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN---HD 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~---~~ 501 (626)
+|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++... ..
T Consensus 94 gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~ 166 (345)
T 3a8x_A 94 GGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLH----ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT 166 (345)
T ss_dssp SCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCC
T ss_pred CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCceecCCCHHHEEECCCCCEEEEeccccccccCCCCc
Confidence 9999999963 246899999999999999999999 5799999999999999999999999999987522 22
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcc-------hhH-HHHHHhhcccccccccHHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFN-------LAT-WVHSVVREEWTVEVFDEVLI 573 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~-------~~~-~~~~~~~~~~~~~~~d~~~~ 573 (626)
.....+++.|++||+.....++.++|||||||++|||++|+.||..... ... ....+......
T Consensus 167 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~--------- 237 (345)
T 3a8x_A 167 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR--------- 237 (345)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC---------
T ss_pred ccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC---------
Confidence 3345688999999999888889999999999999999999999963211 111 11122111110
Q ss_pred hhhccHHHHHHHHHHHhhccCCCCCCCCCH
Q 006903 574 AEAASEERMLKLLQVALRCINQSPNERPSM 603 (626)
Q Consensus 574 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 603 (626)
.+......+.+++.+||+.||++||++
T Consensus 238 ---~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 238 ---IPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp ---CCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred ---CCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 111123357889999999999999996
No 106
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=7.9e-39 Score=331.52 Aligned_cols=257 Identities=19% Similarity=0.224 Sum_probs=189.0
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|.. .+|+.||+|+++... ...+.+.+|++++++++||||+++++++..++..++||||++ |+
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~ 88 (317)
T 2pmi_A 10 LEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-ND 88 (317)
T ss_dssp ---------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-CB
T ss_pred eeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-CC
Confidence 37899999999999985 568999999987543 234678999999999999999999999999999999999998 59
Q ss_pred hhHhhcCC---CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---
Q 006903 428 LFNLLHGS---ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--- 501 (626)
Q Consensus 428 L~~~l~~~---~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--- 501 (626)
|.+++... .....+++..+..++.|++.||.||| +.||+||||||+|||++.++.+||+|||+++.....
T Consensus 89 L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH----~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (317)
T 2pmi_A 89 LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH----ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNT 164 (317)
T ss_dssp HHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCC
T ss_pred HHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH----HCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCccc
Confidence 99988532 12246899999999999999999999 579999999999999999999999999998754322
Q ss_pred ccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc-ccc-ccc-----------
Q 006903 502 QSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE-EWT-VEV----------- 567 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~-~~~-~~~----------- 567 (626)
.....++..|++||.... ..++.++|||||||++|||+||+.||...... +....+... ... ...
T Consensus 165 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 243 (317)
T 2pmi_A 165 FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE-EQLKLIFDIMGTPNESLWPSVTKLPKYN 243 (317)
T ss_dssp CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCCTTTCGGGGGCTTCC
T ss_pred CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCChhHhhhhhhhhhcc
Confidence 223456888999998765 45799999999999999999999999754332 222222110 000 000
Q ss_pred ----------ccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhhh
Q 006903 568 ----------FDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINNIK 614 (626)
Q Consensus 568 ----------~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i~ 614 (626)
+...+ ...........+.+++.+||+.||++|||++|+++ .+.+..
T Consensus 244 ~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 301 (317)
T 2pmi_A 244 PNIQQRPPRDLRQVL-QPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYY 301 (317)
T ss_dssp TTCCCCCCCCSHHHH-GGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred cccccccchhHHHhh-cccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhccc
Confidence 00000 00001112345889999999999999999999986 355443
No 107
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=3.5e-39 Score=338.55 Aligned_cols=240 Identities=18% Similarity=0.242 Sum_probs=193.8
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC----HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS----SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~----~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|+. .+|+.||||++...... .+++.+|++++++++||||+++++++..++..++||||+.
T Consensus 59 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~- 137 (348)
T 1u5q_A 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL- 137 (348)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred eeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC-
Confidence 47899999999999984 67999999999754432 2468899999999999999999999999999999999997
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcccc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFL 505 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~ 505 (626)
|+|.+++.. ....+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++...... ...
T Consensus 138 g~l~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-~~~ 210 (348)
T 1u5q_A 138 GSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLH----SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-NSF 210 (348)
T ss_dssp EEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-CCC
T ss_pred CCHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHH----hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC-Ccc
Confidence 688888853 2356899999999999999999999 579999999999999999999999999998765433 234
Q ss_pred ccccccchhhccc---cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 506 AQTSSLKINDISN---QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 506 ~~~~~~~~pe~~~---~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
.++..|++||... ...++.++|||||||++|||+||+.||...... ............. .. .....
T Consensus 211 ~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~-~~~~~~~~~~~~~-~~---------~~~~~ 279 (348)
T 1u5q_A 211 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALYHIAQNESPA-LQ---------SGHWS 279 (348)
T ss_dssp CSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHSCCCC-CC---------CTTSC
T ss_pred cCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhcCCCC-CC---------CCCCC
Confidence 6788999999874 456788999999999999999999998754333 2222332222111 00 01122
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
..+.+++.+||+.||++|||++++++.
T Consensus 280 ~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 280 EYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred HHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 347789999999999999999999764
No 108
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.2e-39 Score=335.31 Aligned_cols=248 Identities=18% Similarity=0.279 Sum_probs=195.7
Q ss_pred ccccccCCCcceEEEEeCC-----CcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVLDD-----GLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~-----g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.+.||+|+||.||+|.... +..||||.++.... ....+.+|++++++++||||+++++++...+..++||||+
T Consensus 49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 128 (333)
T 1mqb_A 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYM 128 (333)
T ss_dssp EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCC
Confidence 4789999999999998532 34699999976432 2356889999999999999999999999999999999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc-
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ- 502 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~- 502 (626)
++|+|.+++.. ....+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 129 ~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 202 (333)
T 1mqb_A 129 ENGALDKFLRE--KDGEFSVLQLVGMLRGIAAGMKYLA----NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 202 (333)
T ss_dssp TTEEHHHHHHH--TTTCSCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred CCCcHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCChheEEECCCCcEEECCCCcchhhccccc
Confidence 99999999974 2356899999999999999999999 5799999999999999999999999999986543221
Q ss_pred -----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhh
Q 006903 503 -----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEA 576 (626)
Q Consensus 503 -----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 576 (626)
....++..|++||......++.++|||||||++|||+| |+.||... ...+....+.......
T Consensus 203 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~-~~~~~~~~~~~~~~~~----------- 270 (333)
T 1mqb_A 203 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL-SNHEVMKAINDGFRLP----------- 270 (333)
T ss_dssp --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-CHHHHHHHHHTTCCCC-----------
T ss_pred cccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccC-CHHHHHHHHHCCCcCC-----------
Confidence 11233567999999888888999999999999999999 99998643 2233333322221110
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 577 ASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 577 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
........+.+++.+||+.||++||++.|+++.|+++...
T Consensus 271 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 271 TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0111233578899999999999999999999999988654
No 109
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=6.5e-39 Score=333.47 Aligned_cols=262 Identities=23% Similarity=0.398 Sum_probs=203.9
Q ss_pred cccchhhhhcccccccccCCCcceEEEEe-CCCcE--EEEEEcCCCC--CCHHHHHHHHHHhccC-CCCCccccceEEEe
Q 006903 339 NKLKFEDLLRAPAELLGRGKHGSLYRVVL-DDGLM--LAVKRLRDWS--ISSEDFKNRMQKIDHV-KHPNVLPPLAYYCS 412 (626)
Q Consensus 339 ~~~~~~~l~~~~~~~lG~G~fG~Vy~~~~-~~g~~--vAvK~l~~~~--~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~ 412 (626)
+.+.++++. ..+.||+|+||.||+|.. .++.. +|+|.++... ...+.+.+|+++++++ +||||+++++++.+
T Consensus 20 p~~~~~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 97 (327)
T 1fvr_A 20 PVLDWNDIK--FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH 97 (327)
T ss_dssp SBCCGGGCE--EEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEE
T ss_pred ccccHHHcc--ceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeee
Confidence 344445443 358899999999999985 45664 4999987533 2346789999999999 99999999999999
Q ss_pred CCeEEEEEeecCCCChhHhhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCe
Q 006903 413 KQEKLLVYEYQPNGSLFNLLHGSE-------------NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNI 479 (626)
Q Consensus 413 ~~~~~lv~Ey~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NI 479 (626)
.+..++||||+++|+|.+++.... ....+++..++.++.|++.||.||| +.+|+||||||+||
T Consensus 98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~dlkp~NI 173 (327)
T 1fvr_A 98 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS----QKQFIHRDLAARNI 173 (327)
T ss_dssp TTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGE
T ss_pred CCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCccceE
Confidence 999999999999999999997532 1247899999999999999999999 57999999999999
Q ss_pred eeCCCCCeEEeeccCccccCC--CccccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHH
Q 006903 480 LFNNNMEPCISEYGLIVTENH--DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVH 556 (626)
Q Consensus 480 Ll~~~~~~kl~DFGl~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~ 556 (626)
|++.++.+||+|||+++.... ......++..|++||......++.++|||||||++|||+| |+.||... ...+...
T Consensus 174 l~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~-~~~~~~~ 252 (327)
T 1fvr_A 174 LVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-TCAELYE 252 (327)
T ss_dssp EECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC-CHHHHHH
T ss_pred EEcCCCeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCC-cHHHHHH
Confidence 999999999999999864322 1223345677999999887778999999999999999998 99998643 3333333
Q ss_pred HHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccc
Q 006903 557 SVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618 (626)
Q Consensus 557 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~ 618 (626)
.+.... ... ........+.+++.+||+.||++|||++|+++.|+++..+..
T Consensus 253 ~~~~~~-~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 253 KLPQGY-RLE----------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp HGGGTC-CCC----------CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred HhhcCC-CCC----------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 332221 110 011122358889999999999999999999999999876543
No 110
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=5.4e-39 Score=340.71 Aligned_cols=239 Identities=17% Similarity=0.244 Sum_probs=194.3
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|.. .+++.||+|.+.... ...+.+.+|+++++.++|||||++++++.+.+..++||||+++
T Consensus 20 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~g 99 (384)
T 4fr4_A 20 LRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLG 99 (384)
T ss_dssp EEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCC
Confidence 47899999999999985 468999999986432 3446788999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC--Ccc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH--DQS 503 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~--~~~ 503 (626)
|+|.+++.. ...+++..+..++.|++.||.||| +.||+||||||+|||++.++.+||+|||++..... ...
T Consensus 100 g~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH----~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 172 (384)
T 4fr4_A 100 GDLRYHLQQ---NVHFKEETVKLFICELVMALDYLQ----NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQIT 172 (384)
T ss_dssp EEHHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCBC
T ss_pred CcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCceeccCcHHHeEECCCCCEEEeccceeeeccCCCcee
Confidence 999999963 356999999999999999999999 67999999999999999999999999999875432 234
Q ss_pred ccccccccchhhcccc---CCCCCcchhHHHHHHHHHHHcCCCCCCCC--cchhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 504 FLAQTSSLKINDISNQ---MCSTIKADVYGFGVILLELLTGKLVQNNG--FNLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~---~~~~~k~DVwSfGvvl~elltg~~p~~~~--~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
...+++.|++||+... ..++.++|||||||++|||+||+.||... ....+........... .+
T Consensus 173 ~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~------------~p 240 (384)
T 4fr4_A 173 TMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVT------------YP 240 (384)
T ss_dssp CCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCC------------CC
T ss_pred ccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccC------------CC
Confidence 4568899999998753 34788999999999999999999999632 2222322222221110 11
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCC-HHHHHH
Q 006903 579 EERMLKLLQVALRCINQSPNERPS-MNQVAV 608 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs-~~ev~~ 608 (626)
......+.+++.+||+.||++||+ ++++.+
T Consensus 241 ~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 241 SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred CcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 112345888999999999999998 666654
No 111
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=338.62 Aligned_cols=255 Identities=16% Similarity=0.188 Sum_probs=190.8
Q ss_pred ccccccCCCcceEEEEeC----CCcEEEEEEcCCCCC------------CHHHHHHHHHHhccCCCCCccccceEEEe--
Q 006903 351 AELLGRGKHGSLYRVVLD----DGLMLAVKRLRDWSI------------SSEDFKNRMQKIDHVKHPNVLPPLAYYCS-- 412 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~----~g~~vAvK~l~~~~~------------~~~~~~~ei~~l~~l~H~nIv~l~g~~~~-- 412 (626)
.+.||+|+||.||+|... ++..||||++..... ..+.+.+|+..++.++||||+++++++..
T Consensus 42 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~ 121 (345)
T 2v62_A 42 GKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEF 121 (345)
T ss_dssp EEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEES
T ss_pred EeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeeccccccc
Confidence 478999999999999964 578999999875432 12346678888999999999999999988
Q ss_pred --CCeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC--CeE
Q 006903 413 --KQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM--EPC 488 (626)
Q Consensus 413 --~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~--~~k 488 (626)
....++||||+ +++|.+++... ..+++..++.++.|++.||.||| +.+|+||||||+|||++.++ .+|
T Consensus 122 ~~~~~~~lv~e~~-~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~~~k 193 (345)
T 2v62_A 122 KGRSYRFMVMERL-GIDLQKISGQN---GTFKKSTVLQLGIRMLDVLEYIH----ENEYVHGDIKAANLLLGYKNPDQVY 193 (345)
T ss_dssp SSCEEEEEEEECE-EEEHHHHCBGG---GBCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEESSSTTSEE
T ss_pred CCCcEEEEEEecc-CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCcCHHHEEEccCCCCcEE
Confidence 67889999999 99999999642 37999999999999999999999 57999999999999999887 999
Q ss_pred EeeccCccccCCC----------ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHH
Q 006903 489 ISEYGLIVTENHD----------QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSV 558 (626)
Q Consensus 489 l~DFGl~~~~~~~----------~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~ 558 (626)
|+|||+++..... .....++..|++||......++.++|||||||++|||+||+.||.............
T Consensus 194 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~ 273 (345)
T 2v62_A 194 LADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTA 273 (345)
T ss_dssp ECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHH
T ss_pred EEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHH
Confidence 9999998653211 123457889999999888888999999999999999999999996432221111111
Q ss_pred hhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhh
Q 006903 559 VREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKE 615 (626)
Q Consensus 559 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~ 615 (626)
... .... .................+.+++.+||+.||++|||+++|++.|+++..
T Consensus 274 ~~~-~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 274 KTN-LLDE-LPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHH-HHHT-TTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHh-hccc-ccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 110 0000 111110000001233468899999999999999999999999998654
No 112
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=9.4e-39 Score=329.52 Aligned_cols=259 Identities=19% Similarity=0.284 Sum_probs=195.6
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|.. .+|+.||||+++.... ..+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 37 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 116 (310)
T 2wqm_A 37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADA 116 (310)
T ss_dssp EEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCS
T ss_pred EEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCC
Confidence 47899999999999985 5799999999976432 235688999999999999999999999999999999999999
Q ss_pred CChhHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---
Q 006903 426 GSLFNLLHGS-ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--- 501 (626)
Q Consensus 426 g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--- 501 (626)
|+|.+++... .....+++..++.++.+++.||.||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 117 ~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH----~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 192 (310)
T 2wqm_A 117 GDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH----SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA 192 (310)
T ss_dssp CBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEECCC------------
T ss_pred CCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh----hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCcc
Confidence 9999998531 12356899999999999999999999 579999999999999999999999999998653322
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCc-chhHHHHHHhhcccccccccHHHHhhhccHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGF-NLATWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
.....++..|++||......++.++||||||+++|||++|+.||.... +............... .. ...
T Consensus 193 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~---------~~~ 262 (310)
T 2wqm_A 193 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPP-LP---------SDH 262 (310)
T ss_dssp ------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCC-CC---------TTT
T ss_pred ccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCC-Cc---------ccc
Confidence 123456788999999888888999999999999999999999986432 2223333322221111 00 011
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcccccccc
Q 006903 581 RMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEERSISS 623 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~~~~~~ 623 (626)
....+.+++.+||+.||++|||+.++++.|++++.......++
T Consensus 263 ~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~~~~ 305 (310)
T 2wqm_A 263 YSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSLEH 305 (310)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-----
T ss_pred cCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhhhhh
Confidence 2235888999999999999999999999999998876665554
No 113
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.9e-41 Score=344.92 Aligned_cols=256 Identities=22% Similarity=0.332 Sum_probs=182.5
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhcc--CCCCCccccceEEEeCC----eEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDH--VKHPNVLPPLAYYCSKQ----EKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~--l~H~nIv~l~g~~~~~~----~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|+.. ++.||||++.. .....+.+|.+++.. ++||||+++++++...+ ..++||||++
T Consensus 8 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~--~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 84 (303)
T 3gxj_A 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFSS--REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 84 (303)
T ss_dssp CEEEEECSSSEEEEC-CT-TSCEEEEECC---TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECCT
T ss_pred hhhccCCCCeEEEEEEEc-CcceEEEEecc--cchhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEeccC
Confidence 478999999999999874 88999999865 345667788888877 79999999999998876 7899999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh----ccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEE----LREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~----~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
+|+|.+++.. ..+++..++.++.|++.||+|||.. +++++|+||||||+|||++.++.+||+|||+++....
T Consensus 85 ~g~L~~~l~~----~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~~~~ 160 (303)
T 3gxj_A 85 HGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 160 (303)
T ss_dssp TCCHHHHHHH----CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-CCEET
T ss_pred CCCHHHHHhc----cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcceeccC
Confidence 9999999963 3578888999999999999999932 1257899999999999999999999999999865332
Q ss_pred Cc-------cccccccccchhhccccC------CCCCcchhHHHHHHHHHHHcC----------CCCCCCCc----chhH
Q 006903 501 DQ-------SFLAQTSSLKINDISNQM------CSTIKADVYGFGVILLELLTG----------KLVQNNGF----NLAT 553 (626)
Q Consensus 501 ~~-------~~~~~~~~~~~pe~~~~~------~~~~k~DVwSfGvvl~elltg----------~~p~~~~~----~~~~ 553 (626)
.. ....++..|++||..... .++.++|||||||++|||+|| +.||.... ....
T Consensus 161 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~~~~~ 240 (303)
T 3gxj_A 161 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEE 240 (303)
T ss_dssp TTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CCCCC-
T ss_pred CCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCccHHH
Confidence 22 123578899999987654 234689999999999999999 55654221 1111
Q ss_pred HHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccc
Q 006903 554 WVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618 (626)
Q Consensus 554 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~ 618 (626)
............. . .......+....+.+++.+||+.||++|||++|+++.|+++..++.
T Consensus 241 ~~~~~~~~~~~~~-~----~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~~ 300 (303)
T 3gxj_A 241 MRKVVCEQKLRPN-I----PNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 300 (303)
T ss_dssp CHHHHTTSCCCCC-C----CGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC--
T ss_pred HHHHHHHhhcCCC-c----cccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhcc
Confidence 1122211111111 1 1111223556679999999999999999999999999999986553
No 114
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.9e-39 Score=344.44 Aligned_cols=262 Identities=18% Similarity=0.245 Sum_probs=205.1
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCC--eEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ--EKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~--~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|... +|+.||||+++... ...+.+.+|++++++++||||+++++++...+ ..++||||+++
T Consensus 14 ~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~ 93 (396)
T 4eut_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTT
T ss_pred EEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCC
Confidence 478999999999999954 58999999997543 34577889999999999999999999988765 67999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee----CCCCCeEEeeccCccccCCC
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF----NNNMEPCISEYGLIVTENHD 501 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl----~~~~~~kl~DFGl~~~~~~~ 501 (626)
|+|.+++........+++..++.++.|++.||+||| +.+|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 94 g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~ 169 (396)
T 4eut_A 94 GSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR----ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (396)
T ss_dssp EEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCG
T ss_pred CCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH----HCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCC
Confidence 999999975444445999999999999999999999 5799999999999999 77888999999998764332
Q ss_pred c--cccccccccchhhcccc--------CCCCCcchhHHHHHHHHHHHcCCCCCCCC---cchhHHHHHHhhccccccc-
Q 006903 502 Q--SFLAQTSSLKINDISNQ--------MCSTIKADVYGFGVILLELLTGKLVQNNG---FNLATWVHSVVREEWTVEV- 567 (626)
Q Consensus 502 ~--~~~~~~~~~~~pe~~~~--------~~~~~k~DVwSfGvvl~elltg~~p~~~~---~~~~~~~~~~~~~~~~~~~- 567 (626)
. ....++..|++||.... ..++.++|||||||++|||+||+.||... ....+.+............
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (396)
T 4eut_A 170 EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAIS 249 (396)
T ss_dssp GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCE
T ss_pred CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccch
Confidence 2 23457889999998654 34577999999999999999999998632 2223333333332111000
Q ss_pred -----------ccHHH-HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 568 -----------FDEVL-IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 568 -----------~d~~~-~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
+.... ............+.+++.+||+.||++||++.|+++.++++...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 250 GVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp EEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred hheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 00000 01122355666788999999999999999999999999988654
No 115
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=9.9e-39 Score=330.17 Aligned_cols=243 Identities=21% Similarity=0.249 Sum_probs=189.3
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCC-CCHHHHHHHHHHhcc-CCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWS-ISSEDFKNRMQKIDH-VKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~-l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|. ..+++.||||++.... ...+.+.+|++++.+ .+||||+++++++.+++..++||||+++|+
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 97 (316)
T 2ac3_A 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS 97 (316)
T ss_dssp CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred CceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCc
Confidence 4689999999999999 4579999999997654 345789999999988 479999999999999999999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC---eEEeeccCccccCCC---
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME---PCISEYGLIVTENHD--- 501 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGl~~~~~~~--- 501 (626)
|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++. +||+|||++......
T Consensus 98 L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 170 (316)
T 2ac3_A 98 ILSHIHK---RRHFNELEASVVVQDVASALDFLH----NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC 170 (316)
T ss_dssp HHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--------
T ss_pred HHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH----hCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcc
Confidence 9999964 246899999999999999999999 579999999999999998776 999999997643211
Q ss_pred -------ccccccccccchhhcccc-----CCCCCcchhHHHHHHHHHHHcCCCCCCCCcch--------------hHHH
Q 006903 502 -------QSFLAQTSSLKINDISNQ-----MCSTIKADVYGFGVILLELLTGKLVQNNGFNL--------------ATWV 555 (626)
Q Consensus 502 -------~~~~~~~~~~~~pe~~~~-----~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~--------------~~~~ 555 (626)
.....++..|++||.... ..++.++|||||||++|||+||+.||...... ....
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 250 (316)
T 2ac3_A 171 SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLF 250 (316)
T ss_dssp -----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHH
T ss_pred ccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHH
Confidence 112347888999998754 34688999999999999999999998643211 1111
Q ss_pred HHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 556 HSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 556 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..+...... .... . . ......+.+++.+||+.||++|||+.|+++
T Consensus 251 ~~i~~~~~~--~~~~-~-~----~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 251 ESIQEGKYE--FPDK-D-W----AHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHCCCC--CCHH-H-H----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHhccCcc--cCch-h-c----ccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 122111110 0000 0 0 012345889999999999999999999987
No 116
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.6e-39 Score=332.38 Aligned_cols=237 Identities=18% Similarity=0.201 Sum_probs=185.7
Q ss_pred cccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCCH---HHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecC
Q 006903 350 PAELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSISS---EDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~---~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
..+.||+|+||+||+|... +|+.||||++....... ..+..|+..+.++ +||||+++++++...+..++||||+
T Consensus 61 ~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~- 139 (311)
T 3p1a_A 61 RLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC- 139 (311)
T ss_dssp EEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-
T ss_pred eeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-
Confidence 3478999999999999965 79999999987654433 2345555555444 8999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC--c
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--Q 502 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--~ 502 (626)
+|+|.+++... ...++|..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++...... .
T Consensus 140 ~~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 213 (311)
T 3p1a_A 140 GPSLQQHCEAW--GASLPEAQVWGYLRDTLLALAHLH----SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAG 213 (311)
T ss_dssp CCBHHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC-----
T ss_pred CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH----HCCEecCCCCHHHEEECCCCCEEEccceeeeecccCCCC
Confidence 67999988642 356999999999999999999999 578999999999999999999999999998654332 2
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
....++..|++||.... .++.++|||||||++|||++|..|+...... ....... ..+... ....
T Consensus 214 ~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~----~~~~~~~-----~~~~~~-----~~~~ 278 (311)
T 3p1a_A 214 EVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGW----QQLRQGY-----LPPEFT-----AGLS 278 (311)
T ss_dssp -CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHH----HHHTTTC-----CCHHHH-----TTSC
T ss_pred cccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHH----HHHhccC-----CCcccc-----cCCC
Confidence 33457889999998765 6899999999999999999998776543221 1111111 111111 1123
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..+.+++.+||+.||++|||++|+++
T Consensus 279 ~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 279 SELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 45889999999999999999999976
No 117
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=3.9e-39 Score=332.95 Aligned_cols=252 Identities=19% Similarity=0.274 Sum_probs=200.1
Q ss_pred cccccccCCCcceEEEEe------CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccC-CCCCccccceEEEeCC-eEEEE
Q 006903 350 PAELLGRGKHGSLYRVVL------DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQ-EKLLV 419 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~-~~~lv 419 (626)
..+.||+|+||.||+|.. .+++.||||.++.... ..+.+.+|++++.++ +||||+++++++...+ ..++|
T Consensus 31 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv 110 (316)
T 2xir_A 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 110 (316)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred eeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEE
Confidence 357899999999999973 3578999999976543 235688999999999 7999999999988755 48999
Q ss_pred EeecCCCChhHhhcCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC
Q 006903 420 YEYQPNGSLFNLLHGSEN-------------GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME 486 (626)
Q Consensus 420 ~Ey~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~ 486 (626)
|||+++|+|.+++..... ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH----~~~i~H~dikp~Nil~~~~~~ 186 (316)
T 2xir_A 111 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA----SRKCIHRDLAARNILLSEKNV 186 (316)
T ss_dssp EECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEECGGGC
T ss_pred EEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH----hCCcccccCccceEEECCCCC
Confidence 999999999999975332 123889999999999999999999 579999999999999999999
Q ss_pred eEEeeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhh
Q 006903 487 PCISEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVR 560 (626)
Q Consensus 487 ~kl~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 560 (626)
+||+|||+++...... ....++..|++||......++.++|||||||++|||+| |+.||...............
T Consensus 187 ~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~ 266 (316)
T 2xir_A 187 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 266 (316)
T ss_dssp EEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHH
T ss_pred EEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhcc
Confidence 9999999987543222 12345678999999888888999999999999999999 99998754333232222222
Q ss_pred cccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 561 EEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 561 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.. .... +......+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 267 ~~-~~~~----------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 267 GT-RMRA----------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp TC-CCCC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred Cc-cCCC----------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 11 1110 111223588899999999999999999999999998754
No 118
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.2e-38 Score=331.70 Aligned_cols=238 Identities=19% Similarity=0.287 Sum_probs=188.1
Q ss_pred ccccccCCCcceEEEEe----CCCcEEEEEEcCCCC-----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVVL----DDGLMLAVKRLRDWS-----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~----~~g~~vAvK~l~~~~-----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~E 421 (626)
.+.||+|+||.||+++. .+|+.||+|+++... .....+.+|++++++++||||+++++++...+..++|||
T Consensus 22 ~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 101 (327)
T 3a62_A 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILE 101 (327)
T ss_dssp EEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred EEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEe
Confidence 47899999999999986 478999999997643 123467899999999999999999999999999999999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD 501 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~ 501 (626)
|+++|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 102 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH----~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 174 (327)
T 3a62_A 102 YLSGGELFMQLER---EGIFMEDTACFYLAEISMALGHLH----QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD 174 (327)
T ss_dssp CCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCTTTEEECTTSCEEECCCSCC------
T ss_pred CCCCCcHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHH----hCCEEcccCCHHHeEECCCCcEEEEeCCcccccccC
Confidence 9999999999963 246889999999999999999999 579999999999999999999999999998653221
Q ss_pred ---ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 502 ---QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 502 ---~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
.....++..|++||......++.++|||||||++|||++|+.||.... ..+....+...... .+
T Consensus 175 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-~~~~~~~i~~~~~~------------~p 241 (327)
T 3a62_A 175 GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN-RKKTIDKILKCKLN------------LP 241 (327)
T ss_dssp ----CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHHHHHTCCC------------CC
T ss_pred CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC-HHHHHHHHHhCCCC------------CC
Confidence 233467889999999888888999999999999999999999997543 33333333332211 01
Q ss_pred HHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 006903 579 EERMLKLLQVALRCINQSPNERP-----SMNQVAV 608 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RP-----s~~ev~~ 608 (626)
......+.+++.+||+.||++|| ++.|+++
T Consensus 242 ~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 242 PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 11223578899999999999999 6778765
No 119
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=4.8e-39 Score=337.83 Aligned_cols=238 Identities=17% Similarity=0.213 Sum_probs=196.0
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC----CCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS----ISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|+.. +++.||||+++... ...+.+.+|.+++..+ +||||+++++++.+.+..|+||||++
T Consensus 25 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 104 (353)
T 2i0e_A 25 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 104 (353)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCC
Confidence 478999999999999965 58899999997532 3456788999999887 89999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC---CC
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN---HD 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~---~~ 501 (626)
+|+|.+++.. ...+++..+..++.|++.||.||| ++||+||||||+|||++.++.+||+|||+++... ..
T Consensus 105 gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH----~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~ 177 (353)
T 2i0e_A 105 GGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQ----SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT 177 (353)
T ss_dssp SCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCC
T ss_pred CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCcc
Confidence 9999999963 246899999999999999999999 5799999999999999999999999999987532 22
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
.....+++.|++||+.....++.++|||||||++|||++|+.||... +..+....+....... +...
T Consensus 178 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~-~~~~~~~~i~~~~~~~------------p~~~ 244 (353)
T 2i0e_A 178 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE-DEDELFQSIMEHNVAY------------PKSM 244 (353)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCC------------CTTS
T ss_pred cccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCC-CHHHHHHHHHhCCCCC------------CCCC
Confidence 33456889999999998888899999999999999999999999743 3344444444332111 1112
Q ss_pred HHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPS-----MNQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs-----~~ev~~ 608 (626)
...+.+++.+||+.||++||+ ++|+++
T Consensus 245 s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 245 SKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp CHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 235788999999999999996 466654
No 120
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2.5e-39 Score=336.52 Aligned_cols=241 Identities=20% Similarity=0.303 Sum_probs=179.0
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCC-CCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK-HPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|.. .+++.||||++... ....+.+|+++++.+. ||||+++++++.++...++||||+++|+|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 47899999999999995 46899999998653 3467889999999997 99999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC---CeEEeeccCccccCCC---c
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM---EPCISEYGLIVTENHD---Q 502 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~---~~kl~DFGl~~~~~~~---~ 502 (626)
.+++.. ...+++..+..++.|++.||.||| +++|+||||||+|||++.++ .+||+|||+++..... .
T Consensus 94 ~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH----~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 166 (325)
T 3kn6_A 94 FERIKK---KKHFSETEASYIMRKLVSAVSHMH----DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPL 166 (325)
T ss_dssp HHHHHH---CSCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----
T ss_pred HHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcc
Confidence 999964 356999999999999999999999 57999999999999997665 7999999998754322 2
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCc------chhHHHHHHhhcccccccccHHHHhhh
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGF------NLATWVHSVVREEWTVEVFDEVLIAEA 576 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~------~~~~~~~~~~~~~~~~~~~d~~~~~~~ 576 (626)
....++..|++||......++.++|||||||++|||++|+.||.... ...+....+........ .+
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~------ 238 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFE--GE------ 238 (325)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCC--SH------
T ss_pred cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCC--cc------
Confidence 23456888999999988889999999999999999999999997432 12223333332221110 00
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 577 ASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 577 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
........+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 239 AWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred cccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 00112345889999999999999999999874
No 121
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.5e-39 Score=334.23 Aligned_cols=247 Identities=17% Similarity=0.276 Sum_probs=192.9
Q ss_pred ccccccCCCcceEEEEe-CCCc----EEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVL-DDGL----MLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~----~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.+.||+|+||.||+|.. .+++ .||+|.+.... ...+.+.+|++++++++||||+++++++.... .++|+||+
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~~ 98 (327)
T 3lzb_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLM 98 (327)
T ss_dssp EEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEECCC
T ss_pred EEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEec
Confidence 47899999999999984 3454 46888876543 35578999999999999999999999988654 88999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc-
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ- 502 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~- 502 (626)
++|+|.+++... ...+++..++.++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 99 ~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~ 172 (327)
T 3lzb_A 99 PFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLE----DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172 (327)
T ss_dssp SSCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEEEETTEEEECCTTC---------
T ss_pred CCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHh----hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccc
Confidence 999999999743 356899999999999999999999 5799999999999999999999999999986532211
Q ss_pred ----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhc
Q 006903 503 ----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 503 ----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
....++..|++||......++.++|||||||++|||+| |+.||... ...+............ .
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~-~~~~~~~~~~~~~~~~-----------~ 240 (327)
T 3lzb_A 173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLP-----------Q 240 (327)
T ss_dssp -------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-CGGGHHHHHHTTCCCC-----------C
T ss_pred cccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCC-CHHHHHHHHHcCCCCC-----------C
Confidence 12234567999999888889999999999999999999 99998643 2222222222211110 0
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 578 SEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.......+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 241 ~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 241 PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 111233578899999999999999999999999988754
No 122
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=8.9e-39 Score=340.77 Aligned_cols=256 Identities=17% Similarity=0.215 Sum_probs=195.5
Q ss_pred ccccccC--CCcceEEEEeC-CCcEEEEEEcCCCCCCH---HHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRG--KHGSLYRVVLD-DGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G--~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~---~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.+.||+| +||.||+|+.. +|+.||||+++...... +.+.+|+++++.++|||||++++++.+.+..++||||++
T Consensus 30 ~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 109 (389)
T 3gni_B 30 LTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 109 (389)
T ss_dssp EEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred EecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccC
Confidence 4789999 99999999964 79999999997654333 467889999999999999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC-----
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN----- 499 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~----- 499 (626)
+|+|.+++... ....+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||.+....
T Consensus 110 ~~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~ 184 (389)
T 3gni_B 110 YGSAKDLICTH-FMDGMNELAIAYILQGVLKALDYIH----HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQR 184 (389)
T ss_dssp TCBHHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEE
T ss_pred CCCHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEcccccceeecccccc
Confidence 99999999753 2346899999999999999999999 5799999999999999999999999999864321
Q ss_pred -----CCccccccccccchhhcccc--CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccccccc---
Q 006903 500 -----HDQSFLAQTSSLKINDISNQ--MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFD--- 569 (626)
Q Consensus 500 -----~~~~~~~~~~~~~~pe~~~~--~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d--- 569 (626)
.......++..|++||.... ..++.++|||||||++|||+||+.||........... ....... ...+
T Consensus 185 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~-~~~~~~~-~~~~~~~ 262 (389)
T 3gni_B 185 QRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLE-KLNGTVP-CLLDTST 262 (389)
T ss_dssp CSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHH-C--------------
T ss_pred ccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH-HhcCCCC-ccccccc
Confidence 11122356778999998876 5689999999999999999999999975433222211 1110000 0000
Q ss_pred --------------------------------HHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHhh
Q 006903 570 --------------------------------EVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM--INNI 613 (626)
Q Consensus 570 --------------------------------~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~--L~~i 613 (626)
...............+.+++.+||+.||++|||++|+++. ++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~ 340 (389)
T 3gni_B 263 IPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 340 (389)
T ss_dssp -------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC
T ss_pred cccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHH
Confidence 0000000111223458899999999999999999999864 4444
No 123
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2e-39 Score=338.36 Aligned_cols=237 Identities=18% Similarity=0.272 Sum_probs=191.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+++++.++||||+++++++.+.+..++||||+ +
T Consensus 14 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~ 92 (336)
T 3h4j_B 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-G 92 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-C
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-C
Confidence 47899999999999995 679999999986432 23467899999999999999999999999999999999999 7
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC--cc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--QS 503 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--~~ 503 (626)
|+|.+++.. ...+++..+..++.|++.||.||| +.||+||||||+|||+++++.+||+|||++...... ..
T Consensus 93 g~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH----~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~ 165 (336)
T 3h4j_B 93 GELFDYIVE---KKRMTEDEGRRFFQQIICAIEYCH----RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLK 165 (336)
T ss_dssp EEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH----HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTC
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCcccc
Confidence 899998853 246899999999999999999999 568999999999999999999999999998754332 23
Q ss_pred ccccccccchhhccccCCC-CCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 504 FLAQTSSLKINDISNQMCS-TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~-~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
...+++.|++||......+ +.++|||||||++|||++|+.||...... ........... ..+....
T Consensus 166 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~-~~~~~i~~~~~------------~~p~~~s 232 (336)
T 3h4j_B 166 TSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP-NLFKKVNSCVY------------VMPDFLS 232 (336)
T ss_dssp CCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST-TCBCCCCSSCC------------CCCTTSC
T ss_pred cccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH-HHHHHHHcCCC------------CCcccCC
Confidence 4567889999999876655 78999999999999999999999743211 10000000000 0111123
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..+.+++.+||+.||++|||++|+++
T Consensus 233 ~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 233 PGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 35788999999999999999999976
No 124
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=7.9e-39 Score=335.30 Aligned_cols=240 Identities=19% Similarity=0.268 Sum_probs=190.7
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCH---HHHHHHHHHhccCCC--CCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKH--PNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~---~~~~~ei~~l~~l~H--~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||++...+++.||||++....... +.+.+|++++++++| |||+++++++...+..++||| +.+
T Consensus 14 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~ 92 (343)
T 3dbq_A 14 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 92 (343)
T ss_dssp EEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CCS
T ss_pred EEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CCC
Confidence 47899999999999998889999999987654333 568899999999987 999999999999999999999 567
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--- 502 (626)
|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++ ++.+||+|||+++......
T Consensus 93 ~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH----~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~ 164 (343)
T 3dbq_A 93 IDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIH----QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV 164 (343)
T ss_dssp EEHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-------
T ss_pred CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCcceEEEE-CCcEEEeecccccccCcccccc
Confidence 899999964 346899999999999999999999 57999999999999997 5789999999987543221
Q ss_pred --cccccccccchhhcccc-----------CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccccccc
Q 006903 503 --SFLAQTSSLKINDISNQ-----------MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFD 569 (626)
Q Consensus 503 --~~~~~~~~~~~pe~~~~-----------~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d 569 (626)
....++..|++||.... ..++.++|||||||++|||+||+.||....+..................
T Consensus 165 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~- 243 (343)
T 3dbq_A 165 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP- 243 (343)
T ss_dssp -----CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCC-
T ss_pred cCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCc-
Confidence 23467899999998754 5678899999999999999999999976544433333333222111110
Q ss_pred HHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 570 EVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 570 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
......+.+++.+||+.||++|||+.|+++.
T Consensus 244 ---------~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 244 ---------DIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp ---------CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ---------ccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 1112347789999999999999999999864
No 125
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2.8e-39 Score=333.91 Aligned_cols=248 Identities=20% Similarity=0.245 Sum_probs=190.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC----HHHHHHHHHHhccCCCCCccccceEEEeCCe----EEEEEe
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS----SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQE----KLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~----~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~----~~lv~E 421 (626)
.+.||+|+||.||+|+. .+++.||||+++..... .+.+.+|++++++++||||+++++++..... .++|||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e 96 (311)
T 3ork_A 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 96 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEe
Confidence 47899999999999994 67999999999765432 2468899999999999999999999876543 499999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD 501 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~ 501 (626)
|+++|+|.+++.. ...+++..++.++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++......
T Consensus 97 ~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 169 (311)
T 3ork_A 97 YVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSH----QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169 (311)
T ss_dssp CCCEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEEETTSCEEECCCSCC------
T ss_pred cCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCCCcCCCCHHHEEEcCCCCEEEeeccCccccccc
Confidence 9999999999963 246899999999999999999999 579999999999999999999999999998653221
Q ss_pred ------ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhh
Q 006903 502 ------QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 502 ------~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
.....++..|++||......++.++|||||||++|||+||+.||..... .+........... .+....
T Consensus 170 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~-~~~~~~~~~~~~~----~~~~~~- 243 (311)
T 3ork_A 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP-VSVAYQHVREDPI----PPSARH- 243 (311)
T ss_dssp ------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHCCCC----CHHHHS-
T ss_pred ccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHhcCCCC----Cccccc-
Confidence 1223578899999999888889999999999999999999999975433 2222222222111 111111
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCCCHHHHH-HHHHhhh
Q 006903 576 AASEERMLKLLQVALRCINQSPNERPSMNQVA-VMINNIK 614 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~-~~L~~i~ 614 (626)
......+.+++.+||+.||++||++.+++ ..+..+.
T Consensus 244 ---~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 244 ---EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp ---TTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 11234588899999999999999766554 5555543
No 126
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.7e-38 Score=322.47 Aligned_cols=239 Identities=23% Similarity=0.354 Sum_probs=194.0
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|.. .+++.||+|.+.... .....+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 93 (279)
T 3fdn_A 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPL 93 (279)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred eeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCC
Confidence 47899999999999985 457899999986432 2346789999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC-ccc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD-QSF 504 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~-~~~ 504 (626)
|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++...... ...
T Consensus 94 ~~l~~~l~~---~~~~~~~~~~~~~~qi~~~l~~LH----~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~ 166 (279)
T 3fdn_A 94 GTVYRELQK---LSKFDEQRTATYITELANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD 166 (279)
T ss_dssp EEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----TTTCEECCCCGGGEEECTTSCEEECSCCEESCC-------
T ss_pred CcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----hCCEecccCChHhEEEcCCCCEEEEeccccccCCcccccc
Confidence 999999963 246899999999999999999999 689999999999999999999999999987553322 233
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK 584 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 584 (626)
..++..|++||......++.++||||||+++|||++|+.||... +..+........... .+......
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-~~~~~~~~~~~~~~~------------~~~~~~~~ 233 (279)
T 3fdn_A 167 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN-TYQETYKRISRVEFT------------FPDFVTEG 233 (279)
T ss_dssp -CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCS-SHHHHHHHHHHTCCC------------CCTTSCHH
T ss_pred cCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCC-cHHHHHHHHHhCCCC------------CCCcCCHH
Confidence 46788899999988888899999999999999999999999743 333333322222111 01112234
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 585 LLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 585 l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
+.+++.+||+.||++|||+.|+++.
T Consensus 234 ~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 234 ARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred HHHHHHHHhccChhhCCCHHHHhhC
Confidence 7789999999999999999999874
No 127
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.3e-39 Score=339.40 Aligned_cols=253 Identities=19% Similarity=0.306 Sum_probs=200.2
Q ss_pred cccccccCCCcceEEEEeC-CC-----cEEEEEEcCCCCC--CHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEE
Q 006903 350 PAELLGRGKHGSLYRVVLD-DG-----LMLAVKRLRDWSI--SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVY 420 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~-~g-----~~vAvK~l~~~~~--~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~ 420 (626)
..+.||+|+||.||+|... ++ ..||+|.++.... ..+.+.+|+++++++ +||||+++++++...+..++||
T Consensus 50 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 129 (333)
T 2i1m_A 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVIT 129 (333)
T ss_dssp EEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEE
Confidence 3578999999999999853 23 4899999976542 235688999999999 8999999999999999999999
Q ss_pred eecCCCChhHhhcCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEE
Q 006903 421 EYQPNGSLFNLLHGSE-----------NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCI 489 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~-----------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl 489 (626)
||+++|+|.+++.... ....+++..++.++.|++.||.||| +.+|+||||||+|||++.++.+||
T Consensus 130 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dlkp~NIl~~~~~~~kl 205 (333)
T 2i1m_A 130 EYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA----SKNCIHRDVAARNVLLTNGHVAKI 205 (333)
T ss_dssp ECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGCEEEGGGEEEB
T ss_pred ecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh----cCCcccCCcccceEEECCCCeEEE
Confidence 9999999999996321 1246899999999999999999999 579999999999999999999999
Q ss_pred eeccCccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhccc
Q 006903 490 SEYGLIVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEW 563 (626)
Q Consensus 490 ~DFGl~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 563 (626)
+|||++....... ....++..|++||......++.++|||||||++|||+| |..||....... ..........
T Consensus 206 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~~~~~~~~~ 284 (333)
T 2i1m_A 206 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS-KFYKLVKDGY 284 (333)
T ss_dssp CCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH-HHHHHHHHTC
T ss_pred CccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH-HHHHHHhcCC
Confidence 9999987532221 12334567999999888888999999999999999999 888886433222 2222222221
Q ss_pred ccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 564 TVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 564 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
.... +......+.+++.+||+.||++|||+.|+++.|+++..+.
T Consensus 285 ~~~~----------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 328 (333)
T 2i1m_A 285 QMAQ----------PAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328 (333)
T ss_dssp CCCC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCC----------CCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence 1110 1111235788999999999999999999999999887654
No 128
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=3.8e-39 Score=334.21 Aligned_cols=251 Identities=18% Similarity=0.228 Sum_probs=200.8
Q ss_pred cccccccCCCcceEEEEeC------CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEe
Q 006903 350 PAELLGRGKHGSLYRVVLD------DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYE 421 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~E 421 (626)
..+.||+|+||.||+|... +++.||||.+..... ....+.+|++++++++||||+++++++.+.+..++|||
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 108 (322)
T 1p4o_A 29 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 108 (322)
T ss_dssp EEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEE
Confidence 3578999999999999753 478899999976442 23468899999999999999999999999999999999
Q ss_pred ecCCCChhHhhcCCC-------CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccC
Q 006903 422 YQPNGSLFNLLHGSE-------NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGL 494 (626)
Q Consensus 422 y~~~g~L~~~l~~~~-------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl 494 (626)
|+++|+|.+++.... ....+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dikp~NIli~~~~~~kl~Dfg~ 184 (322)
T 1p4o_A 109 LMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN----ANKFVHRDLAARNCMVAEDFTVKIGDFGM 184 (322)
T ss_dssp CCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH----HTTCBCSCCSGGGEEECTTCCEEECCTTC
T ss_pred eCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH----HCCCccCCCccceEEEcCCCeEEECcCcc
Confidence 999999999996321 1245789999999999999999999 57999999999999999999999999999
Q ss_pred ccccCCCc-----cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccc
Q 006903 495 IVTENHDQ-----SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVF 568 (626)
Q Consensus 495 ~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 568 (626)
+....... ....++..|++||......++.++|||||||++|||+| |+.||... +..+........... .
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-~~~~~~~~~~~~~~~-~-- 260 (322)
T 1p4o_A 185 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL-SNEQVLRFVMEGGLL-D-- 260 (322)
T ss_dssp CCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-CHHHHHHHHHTTCCC-C--
T ss_pred ccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccC-CHHHHHHHHHcCCcC-C--
Confidence 86533221 12234667999999888888999999999999999999 78887643 333333333222211 0
Q ss_pred cHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 569 DEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 569 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
........+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 261 --------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 261 --------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp --------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred --------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 0112233578899999999999999999999999987554
No 129
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=4e-39 Score=363.56 Aligned_cols=244 Identities=17% Similarity=0.222 Sum_probs=196.4
Q ss_pred cccccCCCcceEEEEe---CCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVVL---DDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~---~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
+.||+|+||.||+|.+ .+++.||||+++.... ..+++.+|++++++++|||||++++++. .+..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence 5799999999999964 3468899999976543 2468999999999999999999999886 4568899999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--- 502 (626)
|+|.+++.. ...+++..++.++.||+.||+||| +.+||||||||+|||++.++.+||+|||+++......
T Consensus 454 g~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~yLH----~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 454 GPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLE----ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp EEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCHHHHHhh---CCCCCHHHHHHHHHHHHHHHHHHH----HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 999999963 346899999999999999999999 5799999999999999999999999999987543221
Q ss_pred ---cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 503 ---SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 503 ---~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
....++..|++||......++.++|||||||++|||+| |+.||.... ..+....+.... ... .+
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~-~~~~~~~i~~~~-~~~----------~p 594 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-GSEVTAMLEKGE-RMG----------CP 594 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-HHHHHHHHHTTC-CCC----------CC
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHcCC-CCC----------CC
Confidence 12234567999999988889999999999999999999 999997432 233333332221 111 11
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhh
Q 006903 579 EERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKE 615 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~ 615 (626)
..+...+.+++.+||+.||++||++++|++.|+++..
T Consensus 595 ~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 595 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 1233458899999999999999999999999998754
No 130
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.2e-38 Score=345.01 Aligned_cols=238 Identities=18% Similarity=0.305 Sum_probs=197.2
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|+++++.++||||+++++++.+.+..++||||+++
T Consensus 21 ~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~g 100 (476)
T 2y94_A 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSG 100 (476)
T ss_dssp EEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSS
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence 478999999999999954 79999999986532 2346789999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC--cc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--QS 503 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--~~ 503 (626)
|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++...... ..
T Consensus 101 g~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH----~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~ 173 (476)
T 2y94_A 101 GELFDYICK---NGRLDEKESRRLFQQILSGVDYCH----RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR 173 (476)
T ss_dssp EEHHHHTTS---SSSCCHHHHHHHHHHHHHHHHHHH----TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBC
T ss_pred CcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCCCcccccHHHEEEecCCCeEEEeccchhhcccccccc
Confidence 999999953 356999999999999999999999 689999999999999999999999999998764332 23
Q ss_pred ccccccccchhhccccCCC-CCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 504 FLAQTSSLKINDISNQMCS-TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~-~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
...+++.|++||......+ +.++|||||||++|||++|+.||... +.......+....... +....
T Consensus 174 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~-~~~~~~~~i~~~~~~~------------p~~~s 240 (476)
T 2y94_A 174 TSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD-HVPTLFKKICDGIFYT------------PQYLN 240 (476)
T ss_dssp CCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCS-SSHHHHHHHHTTCCCC------------CTTCC
T ss_pred ccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCC-CHHHHHHHHhcCCcCC------------CccCC
Confidence 4567889999999876654 68999999999999999999999754 3333334333322110 01112
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..+.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 241 PSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 34788999999999999999999987
No 131
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.3e-39 Score=338.78 Aligned_cols=259 Identities=20% Similarity=0.254 Sum_probs=196.9
Q ss_pred cccccccCCCcceEEEEe-----CCCcEEEEEEcCCCCC-CHHHHHHHHHHhccCCCCCccccceEEEe--CCeEEEEEe
Q 006903 350 PAELLGRGKHGSLYRVVL-----DDGLMLAVKRLRDWSI-SSEDFKNRMQKIDHVKHPNVLPPLAYYCS--KQEKLLVYE 421 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~-----~~g~~vAvK~l~~~~~-~~~~~~~ei~~l~~l~H~nIv~l~g~~~~--~~~~~lv~E 421 (626)
..+.||+|+||.||+|++ .+++.||||++..... ..+.+.+|++++++++||||+++++++.. ....++|||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 106 (327)
T 3lxl_A 27 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVME 106 (327)
T ss_dssp EEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEE
T ss_pred hhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEe
Confidence 357899999999999984 4689999999976542 33568999999999999999999998874 456899999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD 501 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~ 501 (626)
|+++|+|.+++... ...+++..++.++.|++.||+||| +.+|+||||||+|||++.++.+||+|||++......
T Consensus 107 ~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH----~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 180 (327)
T 3lxl_A 107 YLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLG----SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD 180 (327)
T ss_dssp CCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTT
T ss_pred ecCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCChhhEEECCCCCEEEcccccceecccC
Confidence 99999999999632 246899999999999999999999 579999999999999999999999999998754322
Q ss_pred c------cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccc--ccccHHHH
Q 006903 502 Q------SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTV--EVFDEVLI 573 (626)
Q Consensus 502 ~------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~ 573 (626)
. ....++..|++||......++.++|||||||++|||+||+.||..... +............ ........
T Consensus 181 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 258 (327)
T 3lxl_A 181 KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSA--EFLRMMGCERDVPALSRLLELLE 258 (327)
T ss_dssp CSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHH--HHHHHCC----CCHHHHHHHHHH
T ss_pred CccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccc--hhhhhcccccccccHHHHHHHhh
Confidence 2 223456679999998877788999999999999999999999863211 1110000000000 00000000
Q ss_pred h---hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 574 A---EAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 574 ~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
. ..........+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 259 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 304 (327)
T 3lxl_A 259 EGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG 304 (327)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred cccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 0 001122344688999999999999999999999999988654
No 132
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.5e-38 Score=339.11 Aligned_cols=241 Identities=19% Similarity=0.259 Sum_probs=192.1
Q ss_pred cccccccCCCcceEEEEeCCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCC--CCCccccceEEEeCCeEEEEEeecC
Q 006903 350 PAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVK--HPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~--H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
..+.||+|+||.||+|...+++.||||++...... .+.+.+|++++++++ ||||+++++++..++..++||| +.
T Consensus 60 ~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~ 138 (390)
T 2zmd_A 60 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CG 138 (390)
T ss_dssp EEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CC
T ss_pred EEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cC
Confidence 35789999999999999888999999999765433 357899999999996 5999999999999999999999 56
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--- 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--- 501 (626)
+|+|.+++... ..+++..+..++.||+.||.||| +.+|+||||||+|||++ ++.+||+|||+++.....
T Consensus 139 ~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH----~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 210 (390)
T 2zmd_A 139 NIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIH----QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 210 (390)
T ss_dssp SEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHH----TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc
Confidence 88999999642 46899999999999999999999 68999999999999996 578999999998754322
Q ss_pred --ccccccccccchhhcccc-----------CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccc
Q 006903 502 --QSFLAQTSSLKINDISNQ-----------MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVF 568 (626)
Q Consensus 502 --~~~~~~~~~~~~pe~~~~-----------~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 568 (626)
.....+++.|++||.... ..++.++|||||||++|||++|+.||....+....+..+..........
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 290 (390)
T 2zmd_A 211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 290 (390)
T ss_dssp ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCC
T ss_pred ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCC
Confidence 123468899999998754 3578899999999999999999999976544444444433322111110
Q ss_pred cHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 569 DEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 569 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
......+.+++.+||+.||++|||+.|+++.
T Consensus 291 ----------~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 291 ----------DIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp ----------CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ----------ccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 0112347889999999999999999999863
No 133
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=4.1e-39 Score=347.24 Aligned_cols=244 Identities=17% Similarity=0.203 Sum_probs=195.2
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||+||+|+.. +++.||+|++++.. ...+.+.+|+.++..++||||++++++|.+.+..|+||||+++
T Consensus 79 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~g 158 (437)
T 4aw2_A 79 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVG 158 (437)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCC
Confidence 478999999999999965 58899999986532 2234588999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--- 502 (626)
|+|.+++.. ....+++..+..++.|++.||.||| +.+||||||||+|||++.++.+||+|||+++......
T Consensus 159 g~L~~~l~~--~~~~l~e~~~~~~~~qi~~aL~~LH----~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~ 232 (437)
T 4aw2_A 159 GDLLTLLSK--FEDRLPEEMARFYLAEMVIAIDSVH----QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ 232 (437)
T ss_dssp CBHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEE
T ss_pred CcHHHHHHH--ccCCCCHHHHHHHHHHHHHHHHHHH----hCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCcc
Confidence 999999974 2356999999999999999999999 5799999999999999999999999999986543322
Q ss_pred -cccccccccchhhccc-----cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhh
Q 006903 503 -SFLAQTSSLKINDISN-----QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEA 576 (626)
Q Consensus 503 -~~~~~~~~~~~pe~~~-----~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 576 (626)
....+++.|++||+.. ...++.++|||||||++|||+||+.||... +..+....+.......... .
T Consensus 233 ~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~-~~~~~~~~i~~~~~~~~~p-------~ 304 (437)
T 4aw2_A 233 SSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE-SLVETYGKIMNHKERFQFP-------T 304 (437)
T ss_dssp CCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS-SHHHHHHHHHTHHHHCCCC-------S
T ss_pred cccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC-ChhHHHHhhhhccccccCC-------c
Confidence 2346899999999875 456789999999999999999999999754 3333333333211100000 0
Q ss_pred ccHHHHHHHHHHHhhccCCCCCC--CCCHHHHHH
Q 006903 577 ASEERMLKLLQVALRCINQSPNE--RPSMNQVAV 608 (626)
Q Consensus 577 ~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~ev~~ 608 (626)
........+.+++.+|+..+|++ ||+++|+++
T Consensus 305 ~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 305 QVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp SCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred ccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 00012234788899999998888 999999976
No 134
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=7.9e-39 Score=347.43 Aligned_cols=239 Identities=18% Similarity=0.246 Sum_probs=189.2
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|.. .+|+.||||+++... .....+.+|+++++.++||||+++++++...+..++||||+++
T Consensus 153 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~ 232 (446)
T 4ejn_A 153 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG 232 (446)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSS
T ss_pred eEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCC
Confidence 47899999999999984 579999999987532 2335678899999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---Cc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---DQ 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~~ 502 (626)
|+|.+++.. ...+++..+..++.|++.||+|||+ ..||+||||||+|||++.++.+||+|||+++.... ..
T Consensus 233 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 306 (446)
T 4ejn_A 233 GELFFHLSR---ERVFSEDRARFYGAEIVSALDYLHS---EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM 306 (446)
T ss_dssp CBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----
T ss_pred CcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHhh---cCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCccc
Confidence 999999963 3468999999999999999999994 26899999999999999999999999999875322 22
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
....++..|++||......++.++|||||||++|||+||+.||.... ..+....+....... +....
T Consensus 307 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-~~~~~~~i~~~~~~~------------p~~~~ 373 (446)
T 4ejn_A 307 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-HEKLFELILMEEIRF------------PRTLG 373 (446)
T ss_dssp CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHCCCCC------------CTTSC
T ss_pred ccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC-HHHHHHHHHhCCCCC------------CccCC
Confidence 34568899999999988889999999999999999999999997543 333333333322110 11122
Q ss_pred HHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERP-----SMNQVAV 608 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RP-----s~~ev~~ 608 (626)
..+.+++.+||+.||++|| +++|+++
T Consensus 374 ~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 374 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 3578899999999999999 9999976
No 135
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.8e-38 Score=327.92 Aligned_cols=243 Identities=19% Similarity=0.261 Sum_probs=198.2
Q ss_pred cccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC-------CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEe
Q 006903 350 PAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI-------SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYE 421 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~-------~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~E 421 (626)
..+.||+|+||.||+|.. .+|+.||||.++.... ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus 16 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 95 (321)
T 2a2a_A 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILE 95 (321)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred EeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEE
Confidence 357899999999999995 4689999999875432 35679999999999999999999999999999999999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC----CeEEeeccCccc
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM----EPCISEYGLIVT 497 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGl~~~ 497 (626)
|+++++|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++ .+||+|||++..
T Consensus 96 ~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH----~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~ 168 (321)
T 2a2a_A 96 LVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLH----TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (321)
T ss_dssp CCCSCBHHHHHHT---CSCEEHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEE
T ss_pred cCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCChHHEEEecCCCCcCCEEEccCcccee
Confidence 9999999999963 346899999999999999999999 57999999999999999888 799999999875
Q ss_pred cCCC--ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhh
Q 006903 498 ENHD--QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 498 ~~~~--~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
.... .....++..|++||......++.++|||||||++|||+||+.||.... ..+....+...... .++...
T Consensus 169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-~~~~~~~i~~~~~~---~~~~~~-- 242 (321)
T 2a2a_A 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-KQETLANITSVSYD---FDEEFF-- 242 (321)
T ss_dssp CCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS-HHHHHHHHHTTCCC---CCHHHH--
T ss_pred cCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCC-HHHHHHHHHhcccc---cChhhh--
Confidence 4332 233457889999999888888999999999999999999999997543 23333333222111 111111
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 576 AASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
......+.+++.+||+.||++|||+.|+++
T Consensus 243 ---~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 243 ---SHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp ---TTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred ---cccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 112235788999999999999999999986
No 136
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=9.6e-39 Score=337.96 Aligned_cols=238 Identities=18% Similarity=0.247 Sum_probs=187.5
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC----CHHHHHHHHHH-hccCCCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI----SSEDFKNRMQK-IDHVKHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~----~~~~~~~ei~~-l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|+.. +++.||||++++... ..+.+.+|..+ ++.++||||+++++++.+.+..|+||||++
T Consensus 43 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 122 (373)
T 2r5t_A 43 LKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYIN 122 (373)
T ss_dssp EEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCC
Confidence 478999999999999954 688999999976542 22456677776 577899999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC---CC
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN---HD 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~---~~ 501 (626)
+|+|.+++.. ...+++..+..++.||+.||.||| +++|+||||||+|||++.++.+||+|||+++... ..
T Consensus 123 gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH----~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~ 195 (373)
T 2r5t_A 123 GGELFYHLQR---ERCFLEPRARFYAAEIASALGYLH----SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST 195 (373)
T ss_dssp SCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCC
T ss_pred CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCceecCCCHHHEEECCCCCEEEeeCccccccccCCCc
Confidence 9999999963 246889999999999999999999 5799999999999999999999999999987522 22
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
.....+++.|++||+.....++.++|||||||++|||++|+.||... +..+....+....... ....
T Consensus 196 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~-~~~~~~~~i~~~~~~~------------~~~~ 262 (373)
T 2r5t_A 196 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR-NTAEMYDNILNKPLQL------------KPNI 262 (373)
T ss_dssp CCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS-BHHHHHHHHHHSCCCC------------CSSS
T ss_pred cccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCC-CHHHHHHHHHhcccCC------------CCCC
Confidence 34456889999999998888999999999999999999999999753 3344444443332110 0111
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
...+.+++.+||+.||++||++.+.+.
T Consensus 263 ~~~~~~li~~lL~~dp~~R~~~~~~~~ 289 (373)
T 2r5t_A 263 TNSARHLLEGLLQKDRTKRLGAKDDFM 289 (373)
T ss_dssp CHHHHHHHHHHTCSSGGGSTTTTTTHH
T ss_pred CHHHHHHHHHHcccCHHhCCCCCCCHH
Confidence 234788999999999999999864433
No 137
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.4e-38 Score=323.49 Aligned_cols=243 Identities=18% Similarity=0.288 Sum_probs=196.4
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEe----------------C
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCS----------------K 413 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~----------------~ 413 (626)
.+.||+|+||.||+|... +++.||+|+++... +.+.+|++++++++||||+++++++.. .
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (284)
T 2a19_B 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKT 92 (284)
T ss_dssp EEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEE
T ss_pred eeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCc
Confidence 478999999999999965 79999999987532 567899999999999999999998864 3
Q ss_pred CeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeecc
Q 006903 414 QEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYG 493 (626)
Q Consensus 414 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 493 (626)
...++||||+++|+|.+++... ....+++..++.++.|++.||.||| +.+|+||||||+||++++++.+||+|||
T Consensus 93 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 167 (284)
T 2a19_B 93 KCLFIQMEFCDKGTLEQWIEKR-RGEKLDKVLALELFEQITKGVDYIH----SKKLINRDLKPSNIFLVDTKQVKIGDFG 167 (284)
T ss_dssp EEEEEEECCCCSCBHHHHHHHG-GGSCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEEETTEEEECCCT
T ss_pred ceEEEEEeccCCCCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeeccCCHHHEEEcCCCCEEECcch
Confidence 4579999999999999999642 2356899999999999999999999 5799999999999999999999999999
Q ss_pred CccccCCC--ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHH
Q 006903 494 LIVTENHD--QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEV 571 (626)
Q Consensus 494 l~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 571 (626)
++...... .....++..|++||......++.++||||||+++|||+||..|+... .......... ...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~---~~~~~~~~~~-~~~------ 237 (284)
T 2a19_B 168 LVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET---SKFFTDLRDG-IIS------ 237 (284)
T ss_dssp TCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH---HHHHHHHHTT-CCC------
T ss_pred hheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH---HHHHHHhhcc-ccc------
Confidence 98654332 23345788999999988888899999999999999999999876421 1111111111 111
Q ss_pred HHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccc
Q 006903 572 LIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618 (626)
Q Consensus 572 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~ 618 (626)
......+.+++.+||+.||++|||+.|+++.|+.++....
T Consensus 238 -------~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 238 -------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp -------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred -------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 1112347788999999999999999999999999876544
No 138
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.1e-39 Score=334.81 Aligned_cols=250 Identities=20% Similarity=0.272 Sum_probs=182.3
Q ss_pred cccccccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCC-CCCccccceEEE--------eCCeE
Q 006903 348 RAPAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVK-HPNVLPPLAYYC--------SKQEK 416 (626)
Q Consensus 348 ~~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~-H~nIv~l~g~~~--------~~~~~ 416 (626)
....+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|+.++.++. ||||+++++++. .....
T Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~ 109 (337)
T 3ll6_A 30 LRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEF 109 (337)
T ss_dssp EEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEE
T ss_pred EEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceE
Confidence 34468899999999999995 578999999986543 23457889999999996 999999999984 33457
Q ss_pred EEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCC--ceeccCCCCCeeeCCCCCeEEeeccC
Q 006903 417 LLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDG--IAHGNLKSNNILFNNNMEPCISEYGL 494 (626)
Q Consensus 417 ~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~--ivHrDlkp~NILl~~~~~~kl~DFGl 494 (626)
++||||+. |+|.+++........+++..++.++.|++.||.||| +.+ |+||||||+|||++.++.+||+|||+
T Consensus 110 ~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH----~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 184 (337)
T 3ll6_A 110 LLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH----RQKPPIIHRDLKVENLLLSNQGTIKLCDFGS 184 (337)
T ss_dssp EEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH----TSSSCCBCCCCCGGGCEECTTSCEEBCCCTT
T ss_pred EEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH----hCCCCEEEccCCcccEEECCCCCEEEecCcc
Confidence 99999996 799998864334457999999999999999999999 567 99999999999999999999999999
Q ss_pred ccccCCCcc---------------ccccccccchhhcc---ccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHH
Q 006903 495 IVTENHDQS---------------FLAQTSSLKINDIS---NQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVH 556 (626)
Q Consensus 495 ~~~~~~~~~---------------~~~~~~~~~~pe~~---~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~ 556 (626)
++....... ...++..|++||.. ....++.++|||||||++|||+||+.||...... ....
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-~~~~ 263 (337)
T 3ll6_A 185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL-RIVN 263 (337)
T ss_dssp CBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------
T ss_pred ceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH-Hhhc
Confidence 875433211 23467889999987 4556788999999999999999999998743221 1111
Q ss_pred HHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 557 SVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 557 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
....... .......+.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 264 ----~~~~~~~----------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 264 ----GKYSIPP----------HDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp ------CCCCT----------TCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred ----CcccCCc----------ccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 1100000 0011123678899999999999999999999999987653
No 139
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.1e-39 Score=338.68 Aligned_cols=255 Identities=16% Similarity=0.145 Sum_probs=196.7
Q ss_pred ccccccCCCcceEEEEeC---------CCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccc---------------c
Q 006903 351 AELLGRGKHGSLYRVVLD---------DGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLP---------------P 406 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~---------~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~---------------l 406 (626)
.+.||+|+||.||+|... +++.||||.+... +.+.+|++++++++||||++ +
T Consensus 47 ~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~ 122 (352)
T 2jii_A 47 KSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTC 122 (352)
T ss_dssp EEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCC
T ss_pred EEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccchhhhhhhhccCCccCccch
Confidence 478999999999999965 3789999998753 46889999999999999998 5
Q ss_pred ceEEEe-CCeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC
Q 006903 407 LAYYCS-KQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM 485 (626)
Q Consensus 407 ~g~~~~-~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~ 485 (626)
++++.. .+..++||||+ +|+|.+++... ....+++..++.++.|++.||.||| +.+|+||||||+|||++.++
T Consensus 123 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dikp~NIl~~~~~ 196 (352)
T 2jii_A 123 MGFGVHQDKYRFLVLPSL-GRSLQSALDVS-PKHVLSERSVLQVACRLLDALEFLH----ENEYVHGNVTAENIFVDPED 196 (352)
T ss_dssp CEEEEETTTEEEEEEECC-CEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHH----HTTCBCSCCCGGGEEEETTE
T ss_pred hhccccCCcEEEEEecCC-CcCHHHHHHhC-CcCCCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCCHHHEEEcCCC
Confidence 677766 67889999999 99999999743 1357999999999999999999999 57999999999999999998
Q ss_pred --CeEEeeccCccccCCC----------ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhH
Q 006903 486 --EPCISEYGLIVTENHD----------QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLAT 553 (626)
Q Consensus 486 --~~kl~DFGl~~~~~~~----------~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~ 553 (626)
.+||+|||+++..... .....++..|++||......++.++|||||||++|||+||+.||........
T Consensus 197 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 276 (352)
T 2jii_A 197 QSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTE 276 (352)
T ss_dssp EEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH
T ss_pred CceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHH
Confidence 8999999998653221 1223678899999999888889999999999999999999999975432222
Q ss_pred HHHHHhh--cccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcccc
Q 006903 554 WVHSVVR--EEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEER 619 (626)
Q Consensus 554 ~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~~ 619 (626)
.+..... ........+..... ......+.+++.+||+.||++|||++++++.|+++......
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 340 (352)
T 2jii_A 277 DIMKQKQKFVDKPGPFVGPCGHW----IRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRV 340 (352)
T ss_dssp HHHHHHHHHHHSCCCEECTTSCE----ECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhccCChhhhhhhcccc----CCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCC
Confidence 2111111 00011111100000 01124588899999999999999999999999998766543
No 140
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.4e-38 Score=320.77 Aligned_cols=237 Identities=17% Similarity=0.260 Sum_probs=175.5
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|. ..+++.||+|++.... ...+.+.+|+++++.++||||+++++++.+.+..++||||+ +
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-~ 96 (275)
T 2eue_A 18 VKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-G 96 (275)
T ss_dssp CC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEECC-C
T ss_pred EEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehhc-C
Confidence 4789999999999998 4578999999997643 23457899999999999999999999999999999999999 6
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC--cc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--QS 503 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--~~ 503 (626)
++|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+||++++++.+||+|||++...... ..
T Consensus 97 ~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH----~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 169 (275)
T 2eue_A 97 NELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCH----RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLK 169 (275)
T ss_dssp EEHHHHHHT---SSSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEECTTSCEEECCSSCC----------
T ss_pred CcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCCeeccCChHhEEECCCCCEEEeecccceeccCccccc
Confidence 788888853 346899999999999999999999 579999999999999999999999999998653322 23
Q ss_pred ccccccccchhhccccCCC-CCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 504 FLAQTSSLKINDISNQMCS-TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~-~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
...++..|++||......+ +.++|||||||++|||+||+.||.... ............... +....
T Consensus 170 ~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-~~~~~~~~~~~~~~~------------~~~~~ 236 (275)
T 2eue_A 170 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES-IPVLFKNISNGVYTL------------PKFLS 236 (275)
T ss_dssp -----CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHTCCCC------------CTTSC
T ss_pred CCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhCCCCC------------CccCC
Confidence 3457888999998876554 789999999999999999999997532 333333332221110 11122
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..+.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 237 PGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 34788999999999999999999976
No 141
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=2.7e-38 Score=321.45 Aligned_cols=253 Identities=20% Similarity=0.299 Sum_probs=200.7
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC-------CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI-------SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~-------~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
.+.||+|+||.||+|... +++.||+|.++.... ..+.+.+|++++++++||||+++++++...+..++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 89 (283)
T 3bhy_A 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILEL 89 (283)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred HHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEee
Confidence 478999999999999965 689999999865431 357899999999999999999999999999999999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC----CeEEeeccCcccc
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM----EPCISEYGLIVTE 498 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGl~~~~ 498 (626)
+++++|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++ .+||+|||++...
T Consensus 90 ~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~ 162 (283)
T 3bhy_A 90 VSGGELFDFLAE---KESLTEDEATQFLKQILDGVHYLH----SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 162 (283)
T ss_dssp CCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred cCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----hCCccCCCCChHHEEEecCCCCCCceEEEecccceec
Confidence 999999999963 346899999999999999999999 57999999999999999877 7999999998654
Q ss_pred CCC--ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhh
Q 006903 499 NHD--QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEA 576 (626)
Q Consensus 499 ~~~--~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 576 (626)
... .....++..|++||......++.++||||||+++|||+||+.||..... .+........... .+....
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~---~~~~~~--- 235 (283)
T 3bhy_A 163 EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK-QETLTNISAVNYD---FDEEYF--- 235 (283)
T ss_dssp C--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHTTCCC---CCHHHH---
T ss_pred cCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch-HHHHHHhHhcccC---Ccchhc---
Confidence 322 2234578889999998888889999999999999999999999975432 2222222221111 111111
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhhhhcccc
Q 006903 577 ASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINNIKEEEER 619 (626)
Q Consensus 577 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i~~~~~~ 619 (626)
......+.+++.+||+.||++|||+.|+++ .++.++....+
T Consensus 236 --~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~~~ 278 (283)
T 3bhy_A 236 --SNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRNVR 278 (283)
T ss_dssp --TTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHCCC-
T ss_pred --ccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHHhhh
Confidence 112235788999999999999999999997 56776655443
No 142
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=327.14 Aligned_cols=251 Identities=17% Similarity=0.218 Sum_probs=191.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC------CCHHHHHHHHHHhccCC---CCCccccceEEEeCC-----e
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS------ISSEDFKNRMQKIDHVK---HPNVLPPLAYYCSKQ-----E 415 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~------~~~~~~~~ei~~l~~l~---H~nIv~l~g~~~~~~-----~ 415 (626)
.+.||+|+||.||+|+. .+++.||||+++... .....+.+|++++++++ ||||+++++++.... .
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~ 93 (308)
T 3g33_A 14 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIK 93 (308)
T ss_dssp EEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEE
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCcee
Confidence 47899999999999994 678999999986432 12356778888777664 999999999998755 4
Q ss_pred EEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCc
Q 006903 416 KLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLI 495 (626)
Q Consensus 416 ~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~ 495 (626)
.++||||+. |+|.+++.... ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||++
T Consensus 94 ~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH----~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 167 (308)
T 3g33_A 94 VTLVFEHVD-QDLRTYLDKAP-PPGLPAETIKDLMRQFLRGLDFLH----ANCIVHRDLKPENILVTSGGTVKLADFGLA 167 (308)
T ss_dssp EEEEEECCC-CBHHHHHHTCC-TTCSCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCTTTEEECTTSCEEECSCSCT
T ss_pred EEEEehhhh-cCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEEcCCCCEEEeeCccc
Confidence 799999997 59999997532 345999999999999999999999 578999999999999999999999999998
Q ss_pred cccCC--CccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc-------ccccc
Q 006903 496 VTENH--DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE-------EWTVE 566 (626)
Q Consensus 496 ~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~-------~~~~~ 566 (626)
+.... ......++..|++||......++.++|||||||++|||+||+.||...... +....+... .+...
T Consensus 168 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~ 246 (308)
T 3g33_A 168 RIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFDLIGLPPEDDWPRD 246 (308)
T ss_dssp TTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSCSS
T ss_pred cccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCChhhccch
Confidence 75432 223456788999999998888999999999999999999999999754332 222222111 00000
Q ss_pred cc--cHHHH------hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 567 VF--DEVLI------AEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 567 ~~--d~~~~------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.. ..... .....++....+.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 247 VSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp CSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 00 00000 00011122345788999999999999999999976
No 143
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-38 Score=335.14 Aligned_cols=253 Identities=18% Similarity=0.257 Sum_probs=191.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCC------eEEEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ------EKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~------~~~lv~ 420 (626)
.+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|++++++++||||+++++++.... ..|+||
T Consensus 30 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~ 109 (367)
T 1cm8_A 30 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVM 109 (367)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEE
T ss_pred eEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEE
Confidence 47899999999999995 57999999999664433 356889999999999999999999987653 459999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||+ +++|.+++.. ..+++..+..++.|++.||.||| +.||+||||||+|||++.++.+||+|||+++....
T Consensus 110 e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 180 (367)
T 1cm8_A 110 PFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIH----AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS 180 (367)
T ss_dssp ECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred ecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH----HCCccccCcCHHHEEEcCCCCEEEEeeeccccccc
Confidence 999 7899999964 35899999999999999999999 57999999999999999999999999999987655
Q ss_pred Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcc-cccc-cc----cH---
Q 006903 501 DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREE-WTVE-VF----DE--- 570 (626)
Q Consensus 501 ~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~-~~~~-~~----d~--- 570 (626)
......++..|++||.... ..++.++||||+||++|||++|+.||...... +.+..+.... .... .. ..
T Consensus 181 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~~~~~~~~~~~~~~~~ 259 (367)
T 1cm8_A 181 EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL-DQLKEIMKVTGTPPAEFVQRLQSDEAK 259 (367)
T ss_dssp SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHHHHHhhhHHHH
Confidence 5555677889999998765 67899999999999999999999999754332 2222222110 0000 00 00
Q ss_pred H-HH---------hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhh
Q 006903 571 V-LI---------AEAASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINNI 613 (626)
Q Consensus 571 ~-~~---------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i 613 (626)
. +. ...........+.+++.+||+.||++|||++|+++ .++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~ 314 (367)
T 1cm8_A 260 NYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL 314 (367)
T ss_dssp HHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred HHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhh
Confidence 0 00 00001122345889999999999999999999987 34444
No 144
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.7e-38 Score=323.80 Aligned_cols=243 Identities=22% Similarity=0.308 Sum_probs=190.9
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|.. .++..||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||||+++|+
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 106 (285)
T 3is5_A 27 KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGE 106 (285)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCB
T ss_pred cceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCc
Confidence 57899999999999985 568999999987543 345789999999999999999999999999999999999999999
Q ss_pred hhHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee---CCCCCeEEeeccCccccCC--C
Q 006903 428 LFNLLHGS-ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF---NNNMEPCISEYGLIVTENH--D 501 (626)
Q Consensus 428 L~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGl~~~~~~--~ 501 (626)
|.+++... .....+++..+..++.|++.||.||| +.+|+||||||+||++ +.++.+||+|||++..... .
T Consensus 107 L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~ 182 (285)
T 3is5_A 107 LLERIVSAQARGKALSEGYVAELMKQMMNALAYFH----SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH 182 (285)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC------
T ss_pred HHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH----hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCccc
Confidence 99988532 12356899999999999999999999 5799999999999999 4567899999999865332 2
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
.....++..|++||... ..++.++|||||||++|||++|+.||... +..+............... ... .
T Consensus 183 ~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~-~~~~~~~~~~~~~~~~~~~-----~~~----~ 251 (285)
T 3is5_A 183 STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGT-SLEEVQQKATYKEPNYAVE-----CRP----L 251 (285)
T ss_dssp ----CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCCCC-------CC----C
T ss_pred CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCC-CHHHHHhhhccCCcccccc-----cCc----C
Confidence 23456788899999875 45789999999999999999999999743 2222222222111111000 000 1
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
...+.+++.+||+.||++|||+.|+++
T Consensus 252 ~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 252 TPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp CHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 234778999999999999999999975
No 145
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=8.3e-39 Score=325.18 Aligned_cols=247 Identities=19% Similarity=0.260 Sum_probs=195.4
Q ss_pred ccccccCCCcceEEEEeCC----CcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVLDD----GLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~----g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|...+ +..||+|.+..... ..+.+.+|++++++++||||+++++++.. +..++||||++
T Consensus 17 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~ 95 (281)
T 3cc6_A 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYP 95 (281)
T ss_dssp EEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEECCT
T ss_pred EEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEecCC
Confidence 4789999999999998532 34699999976532 34678999999999999999999998764 55789999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc--
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ-- 502 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~-- 502 (626)
+|+|.+++.. ....+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 96 ~~~L~~~l~~--~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 169 (281)
T 3cc6_A 96 YGELGHYLER--NKNSLKVLTLVLYSLQICKAMAYLE----SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY 169 (281)
T ss_dssp TCBHHHHHHH--HTTTCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC------
T ss_pred CCCHHHHHHh--ccccCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCccceEEECCCCcEEeCccCCCccccccccc
Confidence 9999999964 2346899999999999999999999 5799999999999999999999999999987543321
Q ss_pred --cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccH
Q 006903 503 --SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASE 579 (626)
Q Consensus 503 --~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 579 (626)
....++..|++||......++.++||||||+++|||+| |+.||...... +........... . .+.
T Consensus 170 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~-~~~~~~~~~~~~-~----------~~~ 237 (281)
T 3cc6_A 170 KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK-DVIGVLEKGDRL-P----------KPD 237 (281)
T ss_dssp ---CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG-GHHHHHHHTCCC-C----------CCT
T ss_pred ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH-HHHHHHhcCCCC-C----------CCC
Confidence 22345667999999888888999999999999999998 99998643222 222222211111 0 011
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 580 ERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 580 ~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.....+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 238 ~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 238 LCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 1223588899999999999999999999999998654
No 146
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.4e-38 Score=340.31 Aligned_cols=242 Identities=17% Similarity=0.272 Sum_probs=185.9
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHh-ccCCCCCccccceEEEe----CCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKI-DHVKHPNVLPPLAYYCS----KQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l-~~l~H~nIv~l~g~~~~----~~~~~lv~Ey~~ 424 (626)
.++||+|+||.||+|.. .+++.||||+++. ...+.+|++++ +..+||||+++++++.. .+..|+||||++
T Consensus 67 ~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~ 142 (400)
T 1nxk_A 67 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 142 (400)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred cceeeeccCeEEEEEEECCCCCEEEEEEeCc----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC
Confidence 36899999999999985 4689999999864 35678888887 45689999999998875 567899999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC---CCCeEEeeccCccccCCC
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN---NMEPCISEYGLIVTENHD 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGl~~~~~~~ 501 (626)
+|+|.+++... ....+++..+..++.||+.||.||| +.+|+||||||+|||++. ++.+||+|||+++.....
T Consensus 143 gg~L~~~l~~~-~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~ 217 (400)
T 1nxk_A 143 GGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 217 (400)
T ss_dssp SEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC--
T ss_pred CCcHHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHH----HCCccccCcCcceEEEecCCCCccEEEEecccccccCCC
Confidence 99999999752 2346999999999999999999999 579999999999999998 788999999998754322
Q ss_pred --ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchh---HHHHHHhhcccccccccHHHHhhh
Q 006903 502 --QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLA---TWVHSVVREEWTVEVFDEVLIAEA 576 (626)
Q Consensus 502 --~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~---~~~~~~~~~~~~~~~~d~~~~~~~ 576 (626)
.....++..|++||+.....++.++|||||||++|||+||+.||....... .....+........ .+
T Consensus 218 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~--~~------ 289 (400)
T 1nxk_A 218 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP--NP------ 289 (400)
T ss_dssp ---------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCC--TT------
T ss_pred CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCC--Cc------
Confidence 234467889999999988889999999999999999999999997432211 11112211111100 00
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 577 ASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 577 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
........+.+++.+||+.||++|||+.|+++.
T Consensus 290 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 290 EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 001123358889999999999999999999874
No 147
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=3.7e-38 Score=321.88 Aligned_cols=240 Identities=21% Similarity=0.298 Sum_probs=194.3
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEe----CCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCS----KQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~----~~~~~lv~Ey 422 (626)
.+.||+|+||.||+|.. .++..||+|.+...... .+.+.+|++++++++||||+++++++.. ....++||||
T Consensus 31 ~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~ 110 (290)
T 1t4h_A 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL 110 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEEC
T ss_pred eeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEe
Confidence 46799999999999985 56889999998765433 3568899999999999999999998875 3558999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCC--ceeccCCCCCeeeC-CCCCeEEeeccCccccC
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDG--IAHGNLKSNNILFN-NNMEPCISEYGLIVTEN 499 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~--ivHrDlkp~NILl~-~~~~~kl~DFGl~~~~~ 499 (626)
+++|+|.+++.. ...+++..+..++.+++.||.||| +.+ |+||||||+|||++ .++.+||+|||++....
T Consensus 111 ~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH----~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 111 MTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLH----TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp CCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred cCCCCHHHHHHH---ccCCCHHHHHHHHHHHHHHHHHHH----cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence 999999999963 246899999999999999999999 566 99999999999998 78999999999986543
Q ss_pred CC-ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 500 HD-QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 500 ~~-~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
.. .....++..|++||.... .++.++|||||||++|||+||+.||....+............... .. .
T Consensus 184 ~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~---------~ 252 (290)
T 1t4h_A 184 ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA-SF---------D 252 (290)
T ss_dssp TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCG-GG---------G
T ss_pred ccccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCcc-cc---------C
Confidence 32 233457889999998764 578999999999999999999999986655555544443322111 11 1
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 579 EERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
......+.+++.+||+.||++|||++|+++
T Consensus 253 ~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 253 KVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 111235888999999999999999999976
No 148
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=5e-39 Score=343.94 Aligned_cols=242 Identities=18% Similarity=0.242 Sum_probs=195.4
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|+.. +++.||+|++++.. ...+.+.+|+.+++.++|||||++++++.+.+..|+||||+++
T Consensus 74 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~g 153 (410)
T 3v8s_A 74 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPG 153 (410)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 478999999999999954 68999999986522 2334688999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--- 502 (626)
|+|.++++. ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 154 g~L~~~l~~----~~~~e~~~~~~~~qi~~aL~~LH----~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~ 225 (410)
T 3v8s_A 154 GDLVNLMSN----YDVPEKWARFYTAEVVLALDAIH----SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR 225 (410)
T ss_dssp EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEE
T ss_pred CcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH----HCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCccc
Confidence 999999963 35899999999999999999999 5799999999999999999999999999987644322
Q ss_pred -cccccccccchhhccccCC----CCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhc
Q 006903 503 -SFLAQTSSLKINDISNQMC----STIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 503 -~~~~~~~~~~~pe~~~~~~----~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
....+++.|++||+..... ++.++|||||||++|||+||+.||... +..+....+..........+
T Consensus 226 ~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~-~~~~~~~~i~~~~~~~~~p~-------- 296 (410)
T 3v8s_A 226 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD-SLVGTYSKIMNHKNSLTFPD-------- 296 (410)
T ss_dssp CCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCS-SHHHHHHHHHTHHHHCCCCT--------
T ss_pred ccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCC-ChhhHHHHHHhccccccCCC--------
Confidence 2456889999999886554 678999999999999999999999754 33333333333211111000
Q ss_pred cHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 006903 578 SEERMLKLLQVALRCINQSPNE--RPSMNQVAVM 609 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~--RPs~~ev~~~ 609 (626)
.......+.+++.+||+.+|.+ ||+++||++.
T Consensus 297 ~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 297 DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred cccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 0011234788899999999998 9999999874
No 149
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=2.4e-38 Score=320.88 Aligned_cols=248 Identities=19% Similarity=0.244 Sum_probs=198.5
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|... ++..||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||||+++++|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 93 (277)
T 3f3z_A 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGEL 93 (277)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred eeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcH
Confidence 478999999999999954 57899999987654 4567899999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee---CCCCCeEEeeccCccccCCC--cc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF---NNNMEPCISEYGLIVTENHD--QS 503 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGl~~~~~~~--~~ 503 (626)
.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+||++ +.++.+||+|||++...... ..
T Consensus 94 ~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~ 166 (277)
T 3f3z_A 94 FERVVH---KRVFRESDAARIMKDVLSAVAYCH----KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR 166 (277)
T ss_dssp HHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBC
T ss_pred HHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchh
Confidence 999863 346899999999999999999999 5799999999999999 78899999999998654322 23
Q ss_pred ccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 504 FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
...++..|++||..... ++.++||||||+++|||+||+.||..... .+............ .... . .....
T Consensus 167 ~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~---~~~~-~----~~~~~ 236 (277)
T 3f3z_A 167 TKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTD-SEVMLKIREGTFTF---PEKD-W----LNVSP 236 (277)
T ss_dssp CCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHCCCCC---CHHH-H----TTSCH
T ss_pred ccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhCCCCC---Cchh-h----hcCCH
Confidence 34578889999987654 78999999999999999999999975432 23333332222111 0000 0 01234
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHH--HHHhhhh
Q 006903 584 KLLQVALRCINQSPNERPSMNQVAV--MINNIKE 615 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i~~ 615 (626)
.+.+++.+||+.||++|||+.|+++ .+++...
T Consensus 237 ~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 270 (277)
T 3f3z_A 237 QAESLIRRLLTKSPKQRITSLQALEHEWFEKQLS 270 (277)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHHC
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcCHHHhcccc
Confidence 5788999999999999999999986 4554443
No 150
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=2.5e-38 Score=323.61 Aligned_cols=243 Identities=20% Similarity=0.242 Sum_probs=192.5
Q ss_pred cccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 352 ELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
.+||+|+||.||+|.. .+++.||||.+.... ...+.+.+|+.+++.++||||+++++++...+..++||||+++++|.
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS 107 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence 5899999999999994 568999999987654 34577999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC-CCCeEEeeccCccccCCC---cccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN-NMEPCISEYGLIVTENHD---QSFL 505 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGl~~~~~~~---~~~~ 505 (626)
+++........+++..+..++.|++.||.||| +.+|+||||||+||+++. ++.+||+|||++...... ....
T Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 183 (295)
T 2clq_A 108 ALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH----DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF 183 (295)
T ss_dssp HHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CCC
T ss_pred HHHHhhccCCCccHHHHHHHHHHHHHHHHHHH----hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCccccc
Confidence 99975444456789999999999999999999 579999999999999987 899999999998654321 2334
Q ss_pred ccccccchhhccccC--CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHH
Q 006903 506 AQTSSLKINDISNQM--CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERML 583 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~--~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 583 (626)
.++..|++||..... .++.++||||||+++|||+||+.||..................... .+.....
T Consensus 184 ~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 253 (295)
T 2clq_A 184 TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPE----------IPESMSA 253 (295)
T ss_dssp CCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCC----------CCTTSCH
T ss_pred CCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccccccc----------ccccCCH
Confidence 578889999987653 3688999999999999999999998643222211111111110000 1112233
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 584 KLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 584 ~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+.+++.+||+.||++|||+.|+++
T Consensus 254 ~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 254 EAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp HHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHccCChhhCCCHHHHhc
Confidence 5788999999999999999999975
No 151
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.4e-38 Score=326.46 Aligned_cols=251 Identities=17% Similarity=0.222 Sum_probs=190.2
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 87 (311)
T 4agu_A 8 IGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHT 87 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred eeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCc
Confidence 47899999999999996 45999999998765433 356789999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---cc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QS 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~ 503 (626)
+|.+++.. ...+++..+..++.|++.||.||| +.||+||||||+||+++.++.+||+|||++...... ..
T Consensus 88 ~l~~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (311)
T 4agu_A 88 VLHELDRY---QRGVPEHLVKSITWQTLQAVNFCH----KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYD 160 (311)
T ss_dssp HHHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred hHHHHHhh---hcCCCHHHHHHHHHHHHHHHHHHH----HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccC
Confidence 99998853 346899999999999999999999 579999999999999999999999999998754322 12
Q ss_pred ccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHH--HHhhc------------cccc--c
Q 006903 504 FLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVH--SVVRE------------EWTV--E 566 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~--~~~~~------------~~~~--~ 566 (626)
...++..|++||.... ..++.++|||||||++|||+||+.||........... ..... .+.. .
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (311)
T 4agu_A 161 DEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK 240 (311)
T ss_dssp -----GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCC
T ss_pred CCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCc
Confidence 3456788999998764 5679999999999999999999999975433222111 11000 0000 0
Q ss_pred cccHHH--HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 567 VFDEVL--IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 567 ~~d~~~--~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..++.. ......+.....+.+++.+||+.||++|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 241 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp CCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred CCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 000000 000000122345889999999999999999999986
No 152
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.6e-38 Score=324.93 Aligned_cols=253 Identities=14% Similarity=0.176 Sum_probs=196.8
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEE-EeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYY-CSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~-~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|.. .+++.||||.+.... ..+.+.+|+++++.++|++++..++++ ...+..++||||+ +|+|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L 91 (296)
T 4hgt_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSL 91 (296)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred eeeecCCCCeEEEEEEEcCCCceEEEEeecccc-cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCCH
Confidence 47899999999999994 678999999875433 224688999999999999988888776 4567789999999 9999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee---CCCCCeEEeeccCccccCCC----
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF---NNNMEPCISEYGLIVTENHD---- 501 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGl~~~~~~~---- 501 (626)
.+++... ...+++..+..++.|++.||.||| +.+|+||||||+|||+ ++++.+||+|||+++.....
T Consensus 92 ~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH----~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~ 165 (296)
T 4hgt_A 92 EDLFNFC--SRKFSLKTVLLLADQMISRIEYIH----SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ 165 (296)
T ss_dssp HHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred HHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCc
Confidence 9999632 346999999999999999999999 5799999999999999 78899999999998653322
Q ss_pred ------ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcc--hhHHHHHHhhcccccccccHHHH
Q 006903 502 ------QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFN--LATWVHSVVREEWTVEVFDEVLI 573 (626)
Q Consensus 502 ------~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~ 573 (626)
.....++..|++||......++.++|||||||++|||+||+.||..... ............... ..
T Consensus 166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~---~~--- 239 (296)
T 4hgt_A 166 HIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST---PI--- 239 (296)
T ss_dssp BCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS---CH---
T ss_pred cCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccc---hh---
Confidence 1234678889999999888889999999999999999999999974221 111111111110000 00
Q ss_pred hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccc
Q 006903 574 AEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618 (626)
Q Consensus 574 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~ 618 (626)
..........+.+++.+||+.||++|||++++++.|+++..+..
T Consensus 240 -~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 240 -EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp -HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred -hhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 00001123458899999999999999999999999999876544
No 153
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=9.3e-39 Score=326.61 Aligned_cols=246 Identities=17% Similarity=0.228 Sum_probs=195.4
Q ss_pred cccccCCCcceEEEEe---CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVVL---DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~---~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
+.||+|+||.||+|.. .+++.||||+++..... .+.+.+|+++++.++||||+++++++ ..+..++||||+++
T Consensus 23 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~ 101 (291)
T 1xbb_A 23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAEL 101 (291)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTT
T ss_pred CccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCC
Confidence 3899999999999963 34789999999765422 46789999999999999999999998 66778999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcc--
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQS-- 503 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~-- 503 (626)
|+|.+++.. ...+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 102 ~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH----~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 174 (291)
T 1xbb_A 102 GPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLE----ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 174 (291)
T ss_dssp EEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEE
T ss_pred CCHHHHHHh---CcCCCHHHHHHHHHHHHHHHHHHH----hCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcc
Confidence 999999964 246899999999999999999999 57999999999999999999999999999865433221
Q ss_pred ----ccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 504 ----FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 504 ----~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
...++..|++||......++.++||||||+++|||+| |+.||.... ..+....+.... ... .+
T Consensus 175 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-~~~~~~~~~~~~-~~~----------~~ 242 (291)
T 1xbb_A 175 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-GSEVTAMLEKGE-RMG----------CP 242 (291)
T ss_dssp EC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC-HHHHHHHHHTTC-CCC----------CC
T ss_pred cccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCC-HHHHHHHHHcCC-CCC----------CC
Confidence 1234567999999877778899999999999999999 999987432 222222222211 111 11
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 579 EERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
......+.+++.+||+.||++||++.|+++.|+++....
T Consensus 243 ~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 281 (291)
T 1xbb_A 243 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 281 (291)
T ss_dssp TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 122345888999999999999999999999999987654
No 154
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.3e-38 Score=332.93 Aligned_cols=257 Identities=22% Similarity=0.337 Sum_probs=200.1
Q ss_pred cccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhcc--CCCCCccccceEEEeCC----eEEEEEeec
Q 006903 350 PAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDH--VKHPNVLPPLAYYCSKQ----EKLLVYEYQ 423 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~--l~H~nIv~l~g~~~~~~----~~~lv~Ey~ 423 (626)
..+.||+|+||.||+|+. +|+.||||++... ..+.+.+|++++.. ++||||+++++++...+ ..++||||+
T Consensus 46 ~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~ 122 (342)
T 1b6c_B 46 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 122 (342)
T ss_dssp EEEEEEEETTEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCC
T ss_pred EEeeecCCCCcEEEEEEE-cCccEEEEEeCch--hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeec
Confidence 357899999999999997 5899999998653 34667888888876 79999999999998776 789999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh----ccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEE----LREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN 499 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~----~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~ 499 (626)
++|+|.+++.. ..+++..++.++.|++.||.|||.. +++++|+||||||+|||++.++.+||+|||++....
T Consensus 123 ~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~ 198 (342)
T 1b6c_B 123 EHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 198 (342)
T ss_dssp TTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEE
T ss_pred CCCcHHHHHhc----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceecc
Confidence 99999999963 3589999999999999999999932 114689999999999999999999999999986533
Q ss_pred CCc-------cccccccccchhhccccCC------CCCcchhHHHHHHHHHHHcC----------CCCCCCCc----chh
Q 006903 500 HDQ-------SFLAQTSSLKINDISNQMC------STIKADVYGFGVILLELLTG----------KLVQNNGF----NLA 552 (626)
Q Consensus 500 ~~~-------~~~~~~~~~~~pe~~~~~~------~~~k~DVwSfGvvl~elltg----------~~p~~~~~----~~~ 552 (626)
... ....++..|++||...... ++.++|||||||++|||+|| +.||.... ...
T Consensus 199 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~ 278 (342)
T 1b6c_B 199 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 278 (342)
T ss_dssp TTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHH
T ss_pred ccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHH
Confidence 221 2345788899999876542 23689999999999999999 66775321 222
Q ss_pred HHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccc
Q 006903 553 TWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618 (626)
Q Consensus 553 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~ 618 (626)
.+............. . ......+....+.+++.+||+.||++|||+.||++.|+++.++..
T Consensus 279 ~~~~~~~~~~~~~~~-~----~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~~ 339 (342)
T 1b6c_B 279 EMRKVVCEQKLRPNI-P----NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 339 (342)
T ss_dssp HHHHHHTTSCCCCCC-C----GGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCC-c----ccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHhc
Confidence 232222222111111 1 111223556679999999999999999999999999999986543
No 155
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=322.02 Aligned_cols=239 Identities=21% Similarity=0.342 Sum_probs=176.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|.. .+|+.||||.+.... ...+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 16 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 95 (278)
T 3cok_A 16 GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHN 95 (278)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred eeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCC
Confidence 47899999999999985 579999999986432 2346789999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---Cc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---DQ 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~~ 502 (626)
++|.+++.. ....+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++..... ..
T Consensus 96 ~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 169 (278)
T 3cok_A 96 GEMNRYLKN--RVKPFSENEARHFMHQIITGMLYLH----SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKH 169 (278)
T ss_dssp EEHHHHHHT--CSSCCCHHHHHHHHHHHHHHHHHHH----HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC------
T ss_pred CcHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcc
Confidence 999999974 2357899999999999999999999 57999999999999999999999999999865432 12
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
....++..|++||......++.++||||||+++|||+||+.||...... ............ .+....
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~------------~~~~~~ 236 (278)
T 3cok_A 170 YTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK-NTLNKVVLADYE------------MPSFLS 236 (278)
T ss_dssp ----------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------CCSSCCC------------CCTTSC
T ss_pred eeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH-HHHHHHhhcccC------------CccccC
Confidence 2345778899999988888899999999999999999999998743221 111111111100 011122
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..+.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 237 IEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 35788999999999999999999976
No 156
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.8e-38 Score=323.36 Aligned_cols=253 Identities=14% Similarity=0.171 Sum_probs=198.3
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEE-EeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYY-CSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~-~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|+. .+++.||||++.... ..+++.+|+++++.++|++++..++++ ...+..++||||+ +++|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L 91 (296)
T 3uzp_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSL 91 (296)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEESCS-SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc-chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCCH
Confidence 47899999999999995 679999999986543 335789999999999999988877766 4566789999999 8999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee---CCCCCeEEeeccCccccCCC----
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF---NNNMEPCISEYGLIVTENHD---- 501 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGl~~~~~~~---- 501 (626)
.+++... ...+++..+..++.|++.||+||| +++|+||||||+|||+ ++++.+||+|||++......
T Consensus 92 ~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (296)
T 3uzp_A 92 EDLFNFC--SRKFSLKTVLLLADQMISRIEYIH----SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ 165 (296)
T ss_dssp HHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred HHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHH----hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccccc
Confidence 9999632 346999999999999999999999 5799999999999999 48889999999998653322
Q ss_pred ------ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCc--chhHHHHHHhhcccccccccHHHH
Q 006903 502 ------QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGF--NLATWVHSVVREEWTVEVFDEVLI 573 (626)
Q Consensus 502 ------~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~ 573 (626)
.....++..|++||......++.++|||||||++|||+||+.||.... ...+............ ..+
T Consensus 166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~--- 240 (296)
T 3uzp_A 166 HIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST--PIE--- 240 (296)
T ss_dssp BCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS--CHH---
T ss_pred ccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCC--chH---
Confidence 133467888999999988888999999999999999999999987421 1111111111110000 000
Q ss_pred hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhccc
Q 006903 574 AEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEE 618 (626)
Q Consensus 574 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~ 618 (626)
.........+.+++.+||+.||++|||+.++++.|+++..+..
T Consensus 241 --~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 283 (296)
T 3uzp_A 241 --VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp --HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred --HHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence 0011123458899999999999999999999999999876544
No 157
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=9.7e-39 Score=333.49 Aligned_cols=233 Identities=14% Similarity=0.183 Sum_probs=192.0
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCC---------CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEE
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI---------SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~---------~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 420 (626)
.+.||+|+||.||+|. ..+++.||||+++.... ..+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 29 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~ 108 (335)
T 3dls_A 29 MSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVM 108 (335)
T ss_dssp EEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEE
Confidence 4789999999999998 46789999999976542 2235788999999999999999999999999999999
Q ss_pred eecCCC-ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC
Q 006903 421 EYQPNG-SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN 499 (626)
Q Consensus 421 Ey~~~g-~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~ 499 (626)
||+.+| +|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++....
T Consensus 109 e~~~~g~~l~~~~~~---~~~l~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 181 (335)
T 3dls_A 109 EKHGSGLDLFAFIDR---HPRLDEPLASYIFRQLVSAVGYLR----LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLE 181 (335)
T ss_dssp ECCTTSCBHHHHHHT---CCCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EeCCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----hCCeEEeccCHHHEEEcCCCcEEEeecccceECC
Confidence 999877 99999963 346999999999999999999999 5799999999999999999999999999987643
Q ss_pred CCc--cccccccccchhhccccCCC-CCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhh
Q 006903 500 HDQ--SFLAQTSSLKINDISNQMCS-TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEA 576 (626)
Q Consensus 500 ~~~--~~~~~~~~~~~pe~~~~~~~-~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 576 (626)
... ....++..|++||......+ +.++|||||||++|||++|+.||....... .....
T Consensus 182 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-------~~~~~------------ 242 (335)
T 3dls_A 182 RGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV-------EAAIH------------ 242 (335)
T ss_dssp TTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT-------TTCCC------------
T ss_pred CCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHH-------hhccC------------
Confidence 322 33457889999998876665 789999999999999999999996421110 00000
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 577 ASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 577 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
.+......+.+++.+||+.||++|||++|+++.
T Consensus 243 ~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 243 PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred CCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000112347889999999999999999999884
No 158
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=3.3e-38 Score=328.14 Aligned_cols=250 Identities=18% Similarity=0.252 Sum_probs=196.2
Q ss_pred ccccccCCCcceEEEEe------CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVL------DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
.+.||+|+||.||+|.. .+++.||||.+..... ...++.+|+.++++++||||+++++++...+..++||||
T Consensus 35 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 114 (327)
T 2yfx_A 35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMEL 114 (327)
T ss_dssp EEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred EEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEec
Confidence 47899999999999983 3577999999975432 335788999999999999999999999999999999999
Q ss_pred cCCCChhHhhcCCCC----CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC---CCCeEEeeccCc
Q 006903 423 QPNGSLFNLLHGSEN----GQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN---NMEPCISEYGLI 495 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~----~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGl~ 495 (626)
+++|+|.+++..... ...+++..++.++.|++.||.||| +.+|+||||||+|||++. +..+||+|||++
T Consensus 115 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH----~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~ 190 (327)
T 2yfx_A 115 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE----ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190 (327)
T ss_dssp CTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEESCSSTTCCEEECCCHHH
T ss_pred CCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh----hCCeecCcCCHhHEEEecCCCcceEEECccccc
Confidence 999999999975321 145899999999999999999999 579999999999999994 456999999997
Q ss_pred cccCC-----CccccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhccccccccc
Q 006903 496 VTENH-----DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFD 569 (626)
Q Consensus 496 ~~~~~-----~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d 569 (626)
..... ......++..|++||......++.++|||||||++|||+| |+.||... ...+....+...... .
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~-~~~~~~~~~~~~~~~-~--- 265 (327)
T 2yfx_A 191 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-SNQEVLEFVTSGGRM-D--- 265 (327)
T ss_dssp HHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-CHHHHHHHHHTTCCC-C---
T ss_pred cccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCc-CHHHHHHHHhcCCCC-C---
Confidence 64211 1122345778999999888888999999999999999999 88888643 333333333222111 0
Q ss_pred HHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 570 EVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 570 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
........+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 266 -------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 266 -------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp -------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -------CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 0111233578899999999999999999999999988654
No 159
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.7e-38 Score=338.41 Aligned_cols=249 Identities=19% Similarity=0.275 Sum_probs=182.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCC-CCCccccceEEEeCC--eEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVK-HPNVLPPLAYYCSKQ--EKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~~--~~~lv~Ey~ 423 (626)
.+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|+.++.++. ||||+++++++..++ ..|+|||||
T Consensus 14 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~ 93 (388)
T 3oz6_A 14 VKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM 93 (388)
T ss_dssp EEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECC
T ss_pred EEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEeccc
Confidence 47899999999999984 57999999999754433 346779999999997 999999999997654 689999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH--- 500 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~--- 500 (626)
+ |+|.++++. ..+++..+..++.|++.||.||| +.||+||||||+|||++.++.+||+|||+++....
T Consensus 94 ~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH----~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 164 (388)
T 3oz6_A 94 E-TDLHAVIRA----NILEPVHKQYVVYQLIKVIKYLH----SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRR 164 (388)
T ss_dssp S-EEHHHHHHH----TCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCC
T ss_pred C-cCHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH----hCCEEeCCCCHHHeEEcCCCCEEecCCccccccccccc
Confidence 7 699999963 36899999999999999999999 67999999999999999999999999999864321
Q ss_pred ---------------------Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHH
Q 006903 501 ---------------------DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSV 558 (626)
Q Consensus 501 ---------------------~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~ 558 (626)
......++..|+|||+... ..++.++|||||||++|||++|+.||........ +..+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~-~~~i 243 (388)
T 3oz6_A 165 VTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ-LERI 243 (388)
T ss_dssp CCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHH
T ss_pred ccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHH
Confidence 1122467889999998765 5789999999999999999999999975443322 2222
Q ss_pred hhcccccc--------------------------------ccc---HHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCH
Q 006903 559 VREEWTVE--------------------------------VFD---EVLIAEAASEERMLKLLQVALRCINQSPNERPSM 603 (626)
Q Consensus 559 ~~~~~~~~--------------------------------~~d---~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 603 (626)
........ .+. ...............+.+++.+||+.||++|||+
T Consensus 244 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~ 323 (388)
T 3oz6_A 244 IGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISA 323 (388)
T ss_dssp HHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred HHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCH
Confidence 21100000 000 0000000000123458899999999999999999
Q ss_pred HHHHHH
Q 006903 604 NQVAVM 609 (626)
Q Consensus 604 ~ev~~~ 609 (626)
+|+++.
T Consensus 324 ~e~l~H 329 (388)
T 3oz6_A 324 NDALKH 329 (388)
T ss_dssp HHHTTS
T ss_pred HHHhCC
Confidence 999875
No 160
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.1e-38 Score=331.96 Aligned_cols=252 Identities=20% Similarity=0.210 Sum_probs=193.3
Q ss_pred cccccccCCCcceEEEEe-CCCcEEEEEEcCCCC------CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 350 PAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS------ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~------~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
..+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 30 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 109 (345)
T 3hko_A 30 LKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMEL 109 (345)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeC
Confidence 357899999999999985 568899999986431 2346789999999999999999999999999999999999
Q ss_pred cCCCChhHhhcCCCC-------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHhcc
Q 006903 423 QPNGSLFNLLHGSEN-------------------------------------GQSFDWGSRLRVAACVAKALALIHEELR 465 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~-------------------------------------~~~l~~~~~~~i~~~ia~gL~ylH~~~~ 465 (626)
+++|+|.+++..... ...+++..+..++.|++.||+|||
T Consensus 110 ~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---- 185 (345)
T 3hko_A 110 CHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH---- 185 (345)
T ss_dssp CCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHH----
T ss_pred CCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH----
Confidence 999999999852100 112356778889999999999999
Q ss_pred CCCceeccCCCCCeeeCCCC--CeEEeeccCccccCC-------Cccccccccccchhhcccc--CCCCCcchhHHHHHH
Q 006903 466 EDGIAHGNLKSNNILFNNNM--EPCISEYGLIVTENH-------DQSFLAQTSSLKINDISNQ--MCSTIKADVYGFGVI 534 (626)
Q Consensus 466 ~~~ivHrDlkp~NILl~~~~--~~kl~DFGl~~~~~~-------~~~~~~~~~~~~~pe~~~~--~~~~~k~DVwSfGvv 534 (626)
+.+|+||||||+|||++.++ .+||+|||++..... ......++..|++||.... ..++.++|||||||+
T Consensus 186 ~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~i 265 (345)
T 3hko_A 186 NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265 (345)
T ss_dssp HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHH
T ss_pred HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHH
Confidence 57999999999999998776 899999999864321 1123457888999998754 567899999999999
Q ss_pred HHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHh
Q 006903 535 LLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINN 612 (626)
Q Consensus 535 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~ 612 (626)
+|||+||+.||..... .+.............. +. .......+.+++.+||+.||++|||+.|+++ .+++
T Consensus 266 l~el~~g~~pf~~~~~-~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~ 336 (345)
T 3hko_A 266 LHLLLMGAVPFPGVND-ADTISQVLNKKLCFEN--PN------YNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQ 336 (345)
T ss_dssp HHHHHHSSCSSCCSSH-HHHHHHHHHCCCCTTS--GG------GGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHT
T ss_pred HHHHHHCCCCCCCCCh-HHHHHHHHhcccccCC--cc------cccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhcc
Confidence 9999999999975433 3333333332211110 00 0112235788999999999999999999987 4555
Q ss_pred hh
Q 006903 613 IK 614 (626)
Q Consensus 613 i~ 614 (626)
+.
T Consensus 337 ~~ 338 (345)
T 3hko_A 337 FS 338 (345)
T ss_dssp TS
T ss_pred Ch
Confidence 43
No 161
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.2e-38 Score=325.71 Aligned_cols=250 Identities=15% Similarity=0.208 Sum_probs=193.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC----HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS----SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~----~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|.. .+++.||+|++...... .+.+.+|++++++++||||+++++++..++..++||||+++
T Consensus 39 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 118 (309)
T 2h34_A 39 RRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLING 118 (309)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCC
T ss_pred EEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCC
Confidence 47899999999999995 47899999999764322 25688999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--- 502 (626)
++|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 119 ~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 191 (309)
T 2h34_A 119 VDLAAMLRR---QGPLAPPRAVAIVRQIGSALDAAH----AAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQ 191 (309)
T ss_dssp EEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTSCEEECSCCC-----------
T ss_pred CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCcCCcCCCChHHEEEcCCCCEEEecCccCcccccccccc
Confidence 999999963 246899999999999999999999 5799999999999999999999999999986543221
Q ss_pred -cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 503 -SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 503 -~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
....++..|++||......++.++||||||+++|||+||+.||..... . ............ .. ......
T Consensus 192 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~-~~~~~~~~~~~~----~~----~~~~~~ 261 (309)
T 2h34_A 192 LGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL-S-VMGAHINQAIPR----PS----TVRPGI 261 (309)
T ss_dssp -----CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH-H-HHHHHHHSCCCC----GG----GTSTTC
T ss_pred ccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH-H-HHHHHhccCCCC----cc----ccCCCC
Confidence 234567889999998888889999999999999999999999975322 1 222222211110 00 011122
Q ss_pred HHHHHHHHhhccCCCCCCCC-CHHHHHHHHHhhhhcc
Q 006903 582 MLKLLQVALRCINQSPNERP-SMNQVAVMINNIKEEE 617 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RP-s~~ev~~~L~~i~~~~ 617 (626)
...+.+++.+||+.||++|| +++++++.|+++....
T Consensus 262 ~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 262 PVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp CTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred CHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 33578899999999999999 9999999999876543
No 162
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.5e-38 Score=343.21 Aligned_cols=193 Identities=19% Similarity=0.284 Sum_probs=167.8
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccC------CCCCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHV------KHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l------~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.+.||+|+||.||+|.. .+++.||||+++......+.+.+|+++++.+ +|+||+++++++...+..++||||+
T Consensus 102 ~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~ 181 (429)
T 3kvw_A 102 LKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELL 181 (429)
T ss_dssp EEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCC
T ss_pred EEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEecc
Confidence 47899999999999985 4689999999986544456777888887766 6789999999999999999999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC--eEEeeccCccccCCC
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME--PCISEYGLIVTENHD 501 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~--~kl~DFGl~~~~~~~ 501 (626)
. |+|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+|||++.++. +||+|||++......
T Consensus 182 ~-~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~ 255 (429)
T 3kvw_A 182 S-MNLYELIKKN-KFQGFSLPLVRKFAHSILQCLDALH----KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQR 255 (429)
T ss_dssp C-CBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHH----HHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTCC
T ss_pred C-CCHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeEEccCCCcceEEeecccceecCCc
Confidence 6 6999998753 2346899999999999999999999 568999999999999999887 999999999776655
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCc
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGF 549 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~ 549 (626)
.....++..|++||......++.++|||||||++|||+||+.||....
T Consensus 256 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 256 VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 555678889999999988889999999999999999999999987543
No 163
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=9e-39 Score=332.37 Aligned_cols=258 Identities=22% Similarity=0.324 Sum_probs=197.9
Q ss_pred cccccccCCCcceEEEEe-----CCCcEEEEEEcCCCCC-CHHHHHHHHHHhccCCCCCccccceEEEeCC--eEEEEEe
Q 006903 350 PAELLGRGKHGSLYRVVL-----DDGLMLAVKRLRDWSI-SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ--EKLLVYE 421 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~-----~~g~~vAvK~l~~~~~-~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~--~~~lv~E 421 (626)
..+.||+|+||.||+|++ .+++.||||++..... ..+.+.+|++++++++||||+++++++...+ ..++|||
T Consensus 45 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 124 (326)
T 2w1i_A 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 124 (326)
T ss_dssp EEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEEC
T ss_pred eeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEE
Confidence 357899999999999984 3689999999976543 3357899999999999999999999887654 6899999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD 501 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~ 501 (626)
|+++|+|.+++... ...+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 125 ~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~ 198 (326)
T 2w1i_A 125 YLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLG----TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 198 (326)
T ss_dssp CCTTCBHHHHHHHS--TTSSCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSS
T ss_pred CCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHH----hCCEeccCCCcceEEEcCCCcEEEecCcchhhcccc
Confidence 99999999999743 346899999999999999999999 579999999999999999999999999998764332
Q ss_pred c------cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccc----cHH
Q 006903 502 Q------SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVF----DEV 571 (626)
Q Consensus 502 ~------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~----d~~ 571 (626)
. ....++..|++||......++.++|||||||++|||+||+.|+.... .++........ ..... ...
T Consensus 199 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~ 275 (326)
T 2w1i_A 199 KEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP--AEFMRMIGNDK-QGQMIVFHLIEL 275 (326)
T ss_dssp CSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHH--HHHHHHHCTTC-CTHHHHHHHHHH
T ss_pred ccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCH--HHHHHhhcccc-chhhhHHHHHHH
Confidence 2 12234566999999877778899999999999999999998875321 11111110000 00000 000
Q ss_pred HHh---hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 572 LIA---EAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 572 ~~~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
+.. ...+......+.+++.+||+.||++|||+.|+++.|++++++
T Consensus 276 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 276 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 000 001122345688999999999999999999999999998764
No 164
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=4.3e-38 Score=318.64 Aligned_cols=241 Identities=17% Similarity=0.196 Sum_probs=193.8
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|... +++.||||.+.... ...+.+.+|+++++.++||||+++++++...+..++||||+++|+
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 91 (276)
T 2yex_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91 (276)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred EEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCc
Confidence 478999999999999954 78999999986543 234678999999999999999999999999999999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC-----Cc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH-----DQ 502 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~-----~~ 502 (626)
|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++..... ..
T Consensus 92 L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 164 (276)
T 2yex_A 92 LFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLH----GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164 (276)
T ss_dssp GGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCB
T ss_pred HHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcc
Confidence 9999953 356899999999999999999999 57999999999999999999999999999864321 12
Q ss_pred cccccccccchhhccccCCC-CCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 503 SFLAQTSSLKINDISNQMCS-TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~-~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
....++..|++||......+ +.++||||||+++|||+||+.||...................... ....
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----------~~~~ 234 (276)
T 2yex_A 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP----------WKKI 234 (276)
T ss_dssp CCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTT----------GGGS
T ss_pred cCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCc----------hhhc
Confidence 23456788999998876554 678999999999999999999997544322222222211111000 0112
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
...+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 235 DSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 234778999999999999999999976
No 165
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.3e-38 Score=340.88 Aligned_cols=243 Identities=16% Similarity=0.247 Sum_probs=184.8
Q ss_pred cccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC---------CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEE
Q 006903 350 PAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI---------SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLV 419 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---------~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv 419 (626)
..+.||+|+||.||+|.. .+++.||||++..... ....+.+|++++++++||||+++++++. .+..++|
T Consensus 139 ~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~lv 217 (419)
T 3i6u_A 139 MSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIV 217 (419)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSEEEEE
T ss_pred EEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCceEEE
Confidence 357899999999999985 5689999999865321 1134889999999999999999999875 4568999
Q ss_pred EeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC---CCeEEeeccCcc
Q 006903 420 YEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN---MEPCISEYGLIV 496 (626)
Q Consensus 420 ~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGl~~ 496 (626)
|||+++|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.+ +.+||+|||+++
T Consensus 218 ~e~~~~g~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH----~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~ 290 (419)
T 3i6u_A 218 LELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLH----ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290 (419)
T ss_dssp EECCTTCBGGGGTSS---SCCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred EEcCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCChHhEEEecCCCcceEEEeecccce
Confidence 999999999999853 356999999999999999999999 5799999999999999754 459999999987
Q ss_pred ccCCCc--cccccccccchhhccc---cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHH
Q 006903 497 TENHDQ--SFLAQTSSLKINDISN---QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEV 571 (626)
Q Consensus 497 ~~~~~~--~~~~~~~~~~~pe~~~---~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 571 (626)
...... ....++..|++||... ...++.++|||||||++|||+||+.||............+...... ..+.
T Consensus 291 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~---~~~~ 367 (419)
T 3i6u_A 291 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN---FIPE 367 (419)
T ss_dssp SCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCC---CCHH
T ss_pred ecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCC---CCch
Confidence 644322 3456788999999864 3566789999999999999999999997543332222222222111 0011
Q ss_pred HHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 572 LIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 572 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
. .......+.+++.+||+.||++|||++|+++
T Consensus 368 ~-----~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 368 V-----WAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp H-----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred h-----hcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 0 0112345889999999999999999999987
No 166
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3.3e-38 Score=343.71 Aligned_cols=248 Identities=17% Similarity=0.225 Sum_probs=187.6
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeC------CeEEEEE
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSK------QEKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~------~~~~lv~ 420 (626)
.+.||+|+||.||+|. ..+++.||||++..... ..+.+.+|+++++.++|||||++++++... ...|+||
T Consensus 67 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~ 146 (464)
T 3ttj_A 67 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 146 (464)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEE
T ss_pred EEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEE
Confidence 4789999999999998 45689999999976432 235688999999999999999999998654 3579999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||+++ +|.+.+. ..+++..+..++.|++.||.||| +.||+||||||+|||++.++.+||+|||+++....
T Consensus 147 E~~~~-~l~~~~~-----~~l~~~~~~~~~~qil~aL~~lH----~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 216 (464)
T 3ttj_A 147 ELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 216 (464)
T ss_dssp ECCSE-EHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEECCCCCC-----
T ss_pred eCCCC-CHHHHHh-----hcCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCC
Confidence 99976 5777764 23899999999999999999999 57999999999999999999999999999876443
Q ss_pred C--ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc-ccc-------------
Q 006903 501 D--QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE-EWT------------- 564 (626)
Q Consensus 501 ~--~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~-~~~------------- 564 (626)
. .....++..|++||+.....++.++|||||||++|||++|+.||.+......+. .+... ...
T Consensus 217 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~-~i~~~lg~p~~~~~~~~~~~~~ 295 (464)
T 3ttj_A 217 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN-KVIEQLGTPCPEFMKKLQPTVR 295 (464)
T ss_dssp CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-HHHHHHCSCCHHHHTTSCHHHH
T ss_pred CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHHhcCCCCHHHHHHcchhhh
Confidence 2 234567899999999988889999999999999999999999997554333222 22110 000
Q ss_pred ---------cccccHHHHh-------hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 565 ---------VEVFDEVLIA-------EAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 565 ---------~~~~d~~~~~-------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
....-+.... ..........+.+++.+||+.||++|||++|+++.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 296 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000000 00011224568999999999999999999999873
No 167
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.6e-39 Score=342.75 Aligned_cols=243 Identities=17% Similarity=0.210 Sum_probs=193.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|+. .+|+.||||++++.. ...+.+.+|.+++..++||||+++++++.+.+..|+||||+++
T Consensus 66 ~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~g 145 (412)
T 2vd5_A 66 LKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVG 145 (412)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCC
Confidence 47899999999999996 479999999997532 1223588999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--- 502 (626)
|+|.+++... +..+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 146 g~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~LH----~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~ 219 (412)
T 2vd5_A 146 GDLLTLLSKF--GERIPAEMARFYLAEIVMAIDSVH----RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVR 219 (412)
T ss_dssp CBHHHHHHHH--SSCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEE
T ss_pred CcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH----HCCeeecccCHHHeeecCCCCEEEeechhheeccCCCccc
Confidence 9999999632 346899999999999999999999 5799999999999999999999999999987643322
Q ss_pred -cccccccccchhhccc-------cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHh
Q 006903 503 -SFLAQTSSLKINDISN-------QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIA 574 (626)
Q Consensus 503 -~~~~~~~~~~~pe~~~-------~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 574 (626)
....+++.|++||+.. ...++.++|||||||++|||+||+.||.... ..+....+......... +.
T Consensus 220 ~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~-~~~~~~~i~~~~~~~~~--p~--- 293 (412)
T 2vd5_A 220 SLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS-TAETYGKIVHYKEHLSL--PL--- 293 (412)
T ss_dssp CSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSS-HHHHHHHHHTHHHHCCC--C----
T ss_pred cceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCC-HHHHHHHHHhcccCcCC--Cc---
Confidence 2346899999999876 3457899999999999999999999997543 33333333321100000 00
Q ss_pred hhccHHHHHHHHHHHhhccCCCCCCC---CCHHHHHH
Q 006903 575 EAASEERMLKLLQVALRCINQSPNER---PSMNQVAV 608 (626)
Q Consensus 575 ~~~~~~~~~~l~~l~~~Cl~~dP~~R---Ps~~ev~~ 608 (626)
........+.+++.+||. +|++| |+++|+++
T Consensus 294 --~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 294 --VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp -----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred --cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 001123358889999999 99998 68999865
No 168
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.4e-39 Score=345.48 Aligned_cols=242 Identities=12% Similarity=0.145 Sum_probs=186.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHH---HHhccCCCCCccccc-------eEEEeCC-
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRM---QKIDHVKHPNVLPPL-------AYYCSKQ- 414 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei---~~l~~l~H~nIv~l~-------g~~~~~~- 414 (626)
.+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+ +.+++++|||||+++ +++..++
T Consensus 78 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 157 (377)
T 3byv_A 78 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 157 (377)
T ss_dssp EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTS
T ss_pred cceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCC
Confidence 47899999999999994 679999999997432 2346788999 556667899999998 5555443
Q ss_pred ----------------eEEEEEeecCCCChhHhhcCCC----CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccC
Q 006903 415 ----------------EKLLVYEYQPNGSLFNLLHGSE----NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNL 474 (626)
Q Consensus 415 ----------------~~~lv~Ey~~~g~L~~~l~~~~----~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDl 474 (626)
..++||||+ +|+|.+++.... ....+++..++.++.|++.||+||| +.+|+||||
T Consensus 158 ~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivHrDi 232 (377)
T 3byv_A 158 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH----HYGLVHTYL 232 (377)
T ss_dssp CSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH----HTTEECSCC
T ss_pred ccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH----hCCeecCCC
Confidence 278999999 689999996421 1123456888999999999999999 579999999
Q ss_pred CCCCeeeCCCCCeEEeeccCccccCCCccccccccccchhhccccC-----------CCCCcchhHHHHHHHHHHHcCCC
Q 006903 475 KSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQM-----------CSTIKADVYGFGVILLELLTGKL 543 (626)
Q Consensus 475 kp~NILl~~~~~~kl~DFGl~~~~~~~~~~~~~~~~~~~pe~~~~~-----------~~~~k~DVwSfGvvl~elltg~~ 543 (626)
||+|||++.++.+||+|||+++..........+ ..|++||..... .++.++|||||||++|||+||+.
T Consensus 233 kp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~ 311 (377)
T 3byv_A 233 RPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADL 311 (377)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred CHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCC
Confidence 999999999999999999999865554444556 889999998776 78999999999999999999999
Q ss_pred CCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhhhh
Q 006903 544 VQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINNIKE 615 (626)
Q Consensus 544 p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i~~ 615 (626)
||........ ...... ........+.+++.+||+.||++|||+.|+++ .++++..
T Consensus 312 Pf~~~~~~~~----------~~~~~~-------~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~ 368 (377)
T 3byv_A 312 PITKDAALGG----------SEWIFR-------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRT 368 (377)
T ss_dssp CC------CC----------SGGGGS-------SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHHHH
T ss_pred CCcccccccc----------hhhhhh-------hccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHHHH
Confidence 9864221100 000000 00111235788999999999999999999986 5555544
No 169
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=4.6e-38 Score=327.27 Aligned_cols=247 Identities=19% Similarity=0.235 Sum_probs=195.4
Q ss_pred ccccccccCCCcceEEEEe-CCCcEEEEEEcCCCC---CCHHHHHHHHHHhccCC-CCCccccceEEEeCCeEEEEEeec
Q 006903 349 APAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVK-HPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 349 ~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
...+.||+|+||.||+|.. .+++.||+|+++... .....+.+|+.++..++ ||||+++++++...+..++||||+
T Consensus 32 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~ 111 (327)
T 3lm5_A 32 LTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYA 111 (327)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECC
T ss_pred eccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEec
Confidence 3457899999999999985 469999999987543 23568899999999985 699999999999999999999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC---CCCeEEeeccCccccCC
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN---NMEPCISEYGLIVTENH 500 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGl~~~~~~ 500 (626)
++|+|.+++... ....+++..+..++.|++.||+||| +.||+||||||+|||++. ++.+||+|||+++....
T Consensus 112 ~~~~L~~~~~~~-~~~~~~~~~~~~i~~ql~~~L~~LH----~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 186 (327)
T 3lm5_A 112 AGGEIFSLCLPE-LAEMVSENDVIRLIKQILEGVYYLH----QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH 186 (327)
T ss_dssp TTEEGGGGGSSC-C-CCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC--
T ss_pred CCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHH----HCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCC
Confidence 999999998642 2357999999999999999999999 579999999999999998 78999999999876433
Q ss_pred C--ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 501 D--QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 501 ~--~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
. .....++..|++||......++.++|||||||++|||+||+.||...... +....+....... ..+ ..
T Consensus 187 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~--~~~------~~ 257 (327)
T 3lm5_A 187 ACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ-ETYLNISQVNVDY--SEE------TF 257 (327)
T ss_dssp -------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCC--CTT------TT
T ss_pred ccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch-HHHHHHHhccccc--Cch------hh
Confidence 2 23346788999999998888899999999999999999999999754332 2222222211100 000 01
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 579 EERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
......+.+++.+||+.||++|||++|+++.
T Consensus 258 ~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 258 SSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred cccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 1123357889999999999999999999763
No 170
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=5.9e-38 Score=319.14 Aligned_cols=242 Identities=19% Similarity=0.270 Sum_probs=195.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCH---HHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~---~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|.. .+++.||+|++....... +.+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 90 (284)
T 3kk8_A 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 90 (284)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred hhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCC
Confidence 47899999999999985 468999999997654333 56789999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC---eEEeeccCccccCCCc-
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME---PCISEYGLIVTENHDQ- 502 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGl~~~~~~~~- 502 (626)
+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++. +||+|||++.......
T Consensus 91 ~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~ 163 (284)
T 3kk8_A 91 ELFEDIVA---REFYSEADASHCIQQILESIAYCH----SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 163 (284)
T ss_dssp BHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCB
T ss_pred CHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCcc
Confidence 99998863 246899999999999999999999 579999999999999986655 9999999986543322
Q ss_pred -cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 503 -SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 503 -~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
....++..|++||......++.++||||||+++|||++|+.||..... ................ + .....
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~--~------~~~~~ 234 (284)
T 3kk8_A 164 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-HRLYAQIKAGAYDYPS--P------EWDTV 234 (284)
T ss_dssp CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHTCCCCCT--T------TTTTS
T ss_pred ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch-hHHHHHHHhccccCCc--h------hhccc
Confidence 234678889999998888889999999999999999999999975432 2333333222211110 0 00112
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
...+.+++.+||+.||++|||+.|+++
T Consensus 235 ~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 235 TPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 234788999999999999999999987
No 171
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=3.5e-38 Score=328.65 Aligned_cols=251 Identities=16% Similarity=0.221 Sum_probs=191.8
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|... +|+.||||++...... .+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 109 (331)
T 4aaa_A 30 LGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHT 109 (331)
T ss_dssp EEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred eeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcc
Confidence 478999999999999954 5899999998665433 245789999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---cc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QS 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~ 503 (626)
+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++...... ..
T Consensus 110 ~l~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 182 (331)
T 4aaa_A 110 ILDDLELF---PNGLDYQVVQKYLFQIINGIGFCH----SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYD 182 (331)
T ss_dssp HHHHHHHS---TTCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEECCCTTC-----------
T ss_pred hHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHH----HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCccccC
Confidence 99988753 346899999999999999999999 579999999999999999999999999998653321 22
Q ss_pred ccccccccchhhccccC-CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccc-----------------
Q 006903 504 FLAQTSSLKINDISNQM-CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTV----------------- 565 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~-~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~----------------- 565 (626)
...++..|++||..... .++.++|||||||++|||+||+.||....................
T Consensus 183 ~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (331)
T 4aaa_A 183 DEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVR 262 (331)
T ss_dssp -CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCC
T ss_pred CCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccccccc
Confidence 34578889999987654 678999999999999999999999976544332222111100000
Q ss_pred -ccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 566 -EVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 566 -~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.............+.....+.+++.+||+.||++|||++|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 263 LPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp CCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred CccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000000000001122446889999999999999999999976
No 172
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=328.65 Aligned_cols=253 Identities=21% Similarity=0.312 Sum_probs=194.0
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEe----CCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCS----KQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~----~~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||++.. .+++.||||++.... ...+.+.+|+++++.++||||+++++++.. ....++||||++
T Consensus 34 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~ 113 (317)
T 2buj_A 34 IQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFK 113 (317)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCT
T ss_pred EEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCC
Confidence 47899999999999995 679999999986543 334678999999999999999999999873 347899999999
Q ss_pred CCChhHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc-
Q 006903 425 NGSLFNLLHGS-ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ- 502 (626)
Q Consensus 425 ~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~- 502 (626)
+|+|.+++... .....+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 114 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH----~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~ 189 (317)
T 2buj_A 114 RGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH----AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVE 189 (317)
T ss_dssp TCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEE
T ss_pred CCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEEEcCCCCEEEEecCcchhcccccc
Confidence 99999998642 12457999999999999999999999 5799999999999999999999999999876432111
Q ss_pred -----------cccccccccchhhccccCC---CCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccc
Q 006903 503 -----------SFLAQTSSLKINDISNQMC---STIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVF 568 (626)
Q Consensus 503 -----------~~~~~~~~~~~pe~~~~~~---~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 568 (626)
....++..|++||...... ++.++|||||||++|||++|+.||.....................
T Consensus 190 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-- 267 (317)
T 2buj_A 190 GSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIP-- 267 (317)
T ss_dssp SHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC--CC--
T ss_pred cccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhccCCCC--
Confidence 1123477899999876443 588999999999999999999998521100000111111110000
Q ss_pred cHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 569 DEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 569 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
........+.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 268 --------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~ 308 (317)
T 2buj_A 268 --------QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA 308 (317)
T ss_dssp --------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCC
T ss_pred --------ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCC
Confidence 01112345888999999999999999999999999987543
No 173
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.1e-38 Score=330.12 Aligned_cols=249 Identities=14% Similarity=0.143 Sum_probs=185.2
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|. ..+++.||||+++..... .+.+.+|++++++++||||+++++++...+..++||||++ |
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 117 (329)
T 3gbz_A 39 ITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-N 117 (329)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred EEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCC-C
Confidence 4789999999999998 457999999999755422 3467899999999999999999999999999999999998 5
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee-----CCCCCeEEeeccCccccCC-
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF-----NNNMEPCISEYGLIVTENH- 500 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl-----~~~~~~kl~DFGl~~~~~~- 500 (626)
+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||+ +.++.+||+|||+++....
T Consensus 118 ~L~~~~~~---~~~~~~~~~~~i~~ql~~~l~~LH----~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~ 190 (329)
T 3gbz_A 118 DLKKYMDK---NPDVSMRVIKSFLYQLINGVNFCH----SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIP 190 (329)
T ss_dssp EHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC--
T ss_pred CHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHH----hCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCc
Confidence 99999964 246899999999999999999999 5799999999999999 4555699999999865432
Q ss_pred --CccccccccccchhhccccC-CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccc-----------
Q 006903 501 --DQSFLAQTSSLKINDISNQM-CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVE----------- 566 (626)
Q Consensus 501 --~~~~~~~~~~~~~pe~~~~~-~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----------- 566 (626)
......++..|++||..... .++.++|||||||++|||++|+.||.....................
T Consensus 191 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (329)
T 3gbz_A 191 IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPD 270 (329)
T ss_dssp ---------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhh
Confidence 12234568889999987653 4799999999999999999999999765443322221111000000
Q ss_pred -------cccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 567 -------VFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 567 -------~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.....+. ..........+.+++.+||+.||++|||++|+++
T Consensus 271 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 271 WKQSFPKFRGKTLK-RVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp CCTTCCCCCCCCHH-HHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhccccHh-hhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0000000 0000112245789999999999999999999976
No 174
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=6e-38 Score=326.33 Aligned_cols=246 Identities=15% Similarity=0.218 Sum_probs=192.8
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCC-CCCccccceEEEe--CCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK-HPNVLPPLAYYCS--KQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~-H~nIv~l~g~~~~--~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|. ..+++.||||+++. ...+.+.+|++++++++ ||||+++++++.. ....++||||++++
T Consensus 41 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~ 118 (330)
T 3nsz_A 41 VRKLGRGKYSEVFEAINITNNEKVVVKILKP--VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNT 118 (330)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECS--CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCC
T ss_pred EEEecccCCeEEEEEEECCCCcEEEEEEecc--cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCch
Confidence 4789999999999998 46789999999874 34678999999999997 9999999999987 56789999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC-CeEEeeccCccccCC--Ccc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM-EPCISEYGLIVTENH--DQS 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGl~~~~~~--~~~ 503 (626)
+|.+++. .+++..+..++.|++.||.||| +.+|+||||||+|||++.++ .+||+|||+++.... ...
T Consensus 119 ~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~ 188 (330)
T 3nsz_A 119 DFKQLYQ------TLTDYDIRFYMYEILKALDYCH----SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYN 188 (330)
T ss_dssp CHHHHGG------GCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCC
T ss_pred hHHHHHH------hCCHHHHHHHHHHHHHHHHHHH----hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccc
Confidence 9999984 3789999999999999999999 57999999999999999776 899999999875332 223
Q ss_pred ccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccccc----------ccHHH
Q 006903 504 FLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEV----------FDEVL 572 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~----------~d~~~ 572 (626)
...++..|++||.... ..++.++|||||||++|||+||+.||..+.+..+.+............ .++..
T Consensus 189 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (330)
T 3nsz_A 189 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRF 268 (330)
T ss_dssp SCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHH
T ss_pred cccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccch
Confidence 3457788999998765 568999999999999999999999997655443333222111000000 00000
Q ss_pred ---------------HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 573 ---------------IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 573 ---------------~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
............+.+++.+||+.||++|||++|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 269 NDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000000112346889999999999999999999987
No 175
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=5e-38 Score=346.29 Aligned_cols=242 Identities=17% Similarity=0.211 Sum_probs=196.9
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.++||+|+||.||+|+. .+|+.||+|++.... ...+.+.+|++++++++||||+++++++.+.+..|+||||+++
T Consensus 190 ~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~g 269 (543)
T 3c4z_A 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNG 269 (543)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccC
Confidence 36799999999999996 469999999996532 3346788999999999999999999999999999999999999
Q ss_pred CChhHhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc--
Q 006903 426 GSLFNLLHGSE-NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ-- 502 (626)
Q Consensus 426 g~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~-- 502 (626)
|+|.+++.... ....+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 270 g~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH----~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~ 345 (543)
T 3c4z_A 270 GDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH----QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345 (543)
T ss_dssp CBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCC
T ss_pred CCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH----HcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCcc
Confidence 99999996432 2347999999999999999999999 5799999999999999999999999999987543322
Q ss_pred -cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCc---chhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 503 -SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGF---NLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 503 -~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~---~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
....+++.|++||+.....++.++|||||||++|||+||+.||.... ...+....+...... .+
T Consensus 346 ~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~------------~p 413 (543)
T 3c4z_A 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVT------------YP 413 (543)
T ss_dssp BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCC------------CC
T ss_pred cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccC------------CC
Confidence 23478999999999988889999999999999999999999997532 223333333322111 11
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCH-----HHHHH
Q 006903 579 EERMLKLLQVALRCINQSPNERPSM-----NQVAV 608 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs~-----~ev~~ 608 (626)
......+.+++.+||+.||++||++ +++++
T Consensus 414 ~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 414 DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred cccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 1123357889999999999999975 56653
No 176
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=6e-38 Score=320.97 Aligned_cols=239 Identities=16% Similarity=0.257 Sum_probs=195.7
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||++... +++.||+|.+..... ..+.+.+|+++++.++||||+++++++.+.+..++||||+++
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 99 (294)
T 2rku_A 20 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR 99 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCC
Confidence 478999999999999964 588999999865432 235688999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---Cc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---DQ 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~~ 502 (626)
++|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++..... ..
T Consensus 100 ~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 172 (294)
T 2rku_A 100 RSLLELHKR---RKALTEPEARYYLRQIVLGCQYLH----RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 172 (294)
T ss_dssp CBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCChHhEEEcCCCCEEEEeccCceecccCcccc
Confidence 999999853 246899999999999999999999 57999999999999999999999999999865432 22
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
....++..|++||......++.++||||||+++|||+||+.||..... .+............ +....
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~------------~~~~~ 239 (294)
T 2rku_A 173 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-KETYLRIKKNEYSI------------PKHIN 239 (294)
T ss_dssp CCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHTTCCCC------------CTTSC
T ss_pred ccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHhhccCCC------------ccccC
Confidence 334578889999998888889999999999999999999999975432 22222222221110 01112
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
..+.+++.+||+.||++|||++|+++.
T Consensus 240 ~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 240 PVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp HHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred HHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 347789999999999999999999873
No 177
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.9e-38 Score=349.14 Aligned_cols=241 Identities=22% Similarity=0.206 Sum_probs=196.8
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.++||+|+||.||+|+. .+|+.||||++.... .....+.+|++++++++|||||++++++.+.+..++||||+++
T Consensus 189 ~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~g 268 (576)
T 2acx_A 189 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNG 268 (576)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCC
Confidence 47899999999999995 479999999986532 3456788999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc--c
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--S 503 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--~ 503 (626)
|+|.+++... ....+++..+..++.||+.||.||| +.+||||||||+|||++.++.+||+|||+++...... .
T Consensus 269 g~L~~~l~~~-~~~~l~e~~~~~i~~qIl~aL~yLH----~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~~ 343 (576)
T 2acx_A 269 GDLKFHIYHM-GQAGFPEARAVFYAAEICCGLEDLH----RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIK 343 (576)
T ss_dssp CBHHHHHHSS-SSCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCEE
T ss_pred CcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHH----HCCEeccCCchheEEEeCCCCeEEEecccceecccCcccc
Confidence 9999999743 2345999999999999999999999 5799999999999999999999999999987643322 3
Q ss_pred ccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcc---hhHHHHHHhhcccccccccHHHHhhhccHH
Q 006903 504 FLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFN---LATWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~---~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
...+++.|++||+.....++.++|||||||++|||++|+.||..... .......+..... . .+..
T Consensus 344 ~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~--~----------~p~~ 411 (576)
T 2acx_A 344 GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPE--E----------YSER 411 (576)
T ss_dssp CCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCC--C----------CCTT
T ss_pred ccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccc--c----------CCcc
Confidence 34688999999998887889999999999999999999999975422 1222222221110 0 1111
Q ss_pred HHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 006903 581 RMLKLLQVALRCINQSPNERP-----SMNQVAV 608 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RP-----s~~ev~~ 608 (626)
....+.+++.+||+.||++|| +++|+++
T Consensus 412 ~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 412 FSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp SCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred CCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 223578899999999999999 7788865
No 178
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=336.25 Aligned_cols=243 Identities=14% Similarity=0.188 Sum_probs=193.7
Q ss_pred ccccccCCCcceEEEE------eCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCC---CCCccccceEEEeCCeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVV------LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK---HPNVLPPLAYYCSKQEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~------~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~---H~nIv~l~g~~~~~~~~~lv~E 421 (626)
.+.||+|+||.||+|. ..+++.||||+++.. ...++.+|++++++++ |+||+++++++...+..++|||
T Consensus 70 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e 147 (365)
T 3e7e_A 70 HHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGE 147 (365)
T ss_dssp EEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEEC
T ss_pred EEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEe
Confidence 4789999999999994 456899999999753 4667888888888877 9999999999999999999999
Q ss_pred ecCCCChhHhhcCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC-----------CCCeE
Q 006903 422 YQPNGSLFNLLHGSE--NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN-----------NMEPC 488 (626)
Q Consensus 422 y~~~g~L~~~l~~~~--~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~-----------~~~~k 488 (626)
|+++|+|.+++...+ ....+++..++.++.|++.||+||| +.+||||||||+|||++. ++.+|
T Consensus 148 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH----~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~k 223 (365)
T 3e7e_A 148 LYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH----DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLA 223 (365)
T ss_dssp CCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCSGGGEEECGGGTCC------CTTEE
T ss_pred ccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh----hCCeecCCCCHHHEEecccccCccccccccCCEE
Confidence 999999999996321 3457999999999999999999999 689999999999999998 89999
Q ss_pred EeeccCccccC---C--CccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccc
Q 006903 489 ISEYGLIVTEN---H--DQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEW 563 (626)
Q Consensus 489 l~DFGl~~~~~---~--~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 563 (626)
|+|||+++... . ......++..|++||......++.++|||||||++|||+||+.||....... + .
T Consensus 224 l~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-~--------~ 294 (365)
T 3e7e_A 224 LIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE-C--------K 294 (365)
T ss_dssp ECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-E--------E
T ss_pred EeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc-e--------e
Confidence 99999986422 1 1233457899999999988889999999999999999999999986322110 0 0
Q ss_pred ccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCC-CCHHHHHHHHHhhhhc
Q 006903 564 TVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNER-PSMNQVAVMINNIKEE 616 (626)
Q Consensus 564 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~R-Ps~~ev~~~L~~i~~~ 616 (626)
....+.. . .. ...+.+++..|++.+|.+| |+++++.+.|+++...
T Consensus 295 ~~~~~~~----~-~~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 295 PEGLFRR----L-PH---LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp ECSCCTT----C-SS---HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred echhccc----c-Cc---HHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 0000000 0 11 2235567789999999998 6888888888887554
No 179
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=329.04 Aligned_cols=256 Identities=18% Similarity=0.196 Sum_probs=190.1
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCC--HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSIS--SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|... +++.||||+++..... ...+.+|++++++++||||+++++++...+..++||||++ |+
T Consensus 7 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~ 85 (324)
T 3mtl_A 7 LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KD 85 (324)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-EE
T ss_pred EEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-cC
Confidence 478999999999999954 7899999999754322 2245689999999999999999999999999999999997 59
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---ccc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSF 504 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~ 504 (626)
|.+++... ...+++..+..++.|++.||.||| +.||+||||||+|||++.++.+||+|||++...... ...
T Consensus 86 l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH----~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 159 (324)
T 3mtl_A 86 LKQYLDDC--GNIINMHNVKLFLFQLLRGLAYCH----RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDN 159 (324)
T ss_dssp HHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHH----HTTEEESSCCGGGEEECTTCCEEECSSSEEECC---------
T ss_pred HHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH----HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCcccccc
Confidence 99988642 356899999999999999999999 579999999999999999999999999998654322 123
Q ss_pred cccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcc--cccccccH-----HHHh--
Q 006903 505 LAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREE--WTVEVFDE-----VLIA-- 574 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~--~~~~~~d~-----~~~~-- 574 (626)
..++..|++||.... ..++.++|||||||++|||+||+.||..... .+....+.... ...+.+.. ....
T Consensus 160 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (324)
T 3mtl_A 160 EVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTV-EEQLHFIFRILGTPTEETWPGILSNEEFKTYN 238 (324)
T ss_dssp ---CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTC
T ss_pred ccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCChHhchhhhcchhhcccc
Confidence 356888999998765 5679999999999999999999999975432 22222221100 00000000 0000
Q ss_pred ---------hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhhh
Q 006903 575 ---------EAASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINNIK 614 (626)
Q Consensus 575 ---------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i~ 614 (626)
....+.....+.+++.+||+.||++|||++|+++ .+.++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 289 (324)
T 3mtl_A 239 YPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLG 289 (324)
T ss_dssp CCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred cccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcc
Confidence 0000112345789999999999999999999987 444443
No 180
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2.4e-38 Score=331.31 Aligned_cols=240 Identities=18% Similarity=0.246 Sum_probs=190.6
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|.. .+|+.||||++..... ...+|++++.++ +||||+++++++.+.+..|+||||+++|+|
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L 103 (342)
T 2qr7_A 27 KEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGEL 103 (342)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcH
Confidence 47899999999999985 4689999999976432 345688888777 799999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC----CCeEEeeccCccccCCC---
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN----MEPCISEYGLIVTENHD--- 501 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~----~~~kl~DFGl~~~~~~~--- 501 (626)
.+++.. ...+++..+..++.|++.||.||| +.||+||||||+|||+.++ +.+||+|||+++.....
T Consensus 104 ~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH----~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~ 176 (342)
T 2qr7_A 104 LDKILR---QKFFSEREASAVLFTITKTVEYLH----AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL 176 (342)
T ss_dssp HHHHHT---CTTCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCC
T ss_pred HHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCc
Confidence 999963 346899999999999999999999 5799999999999998543 34999999998754322
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCC--cchhHHHHHHhhcccccccccHHHHhhhccH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNG--FNLATWVHSVVREEWTVEVFDEVLIAEAASE 579 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~--~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 579 (626)
.....++..|++||......++.++|||||||++|||++|+.||... ....+....+........ .. ...
T Consensus 177 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~--~~------~~~ 248 (342)
T 2qr7_A 177 LMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLS--GG------YWN 248 (342)
T ss_dssp BCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCC--ST------TTT
T ss_pred eeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccC--cc------ccc
Confidence 22345688999999987777788999999999999999999999743 233334444333322110 00 001
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 580 ERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 580 ~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.....+.+++.+||+.||++|||+.|+++
T Consensus 249 ~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 249 SVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred cCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 12335788999999999999999999986
No 181
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=8.2e-38 Score=321.40 Aligned_cols=240 Identities=18% Similarity=0.287 Sum_probs=196.9
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|.. .+++.||||.+.... ...+.+.+|+.++++++||||+++++++...+..++||||+++++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 106 (303)
T 3a7i_A 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS 106 (303)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred hhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCc
Confidence 47899999999999984 568999999987543 345789999999999999999999999999999999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---ccc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSF 504 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~ 504 (626)
|.+++.. ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++...... ...
T Consensus 107 L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 178 (303)
T 3a7i_A 107 ALDLLEP----GPLDETQIATILREILKGLDYLH----SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 178 (303)
T ss_dssp HHHHHTT----SCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCC
T ss_pred HHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH----HCCCccCCCChheEEECCCCCEEEeecccceecCccccccCc
Confidence 9999953 46899999999999999999999 579999999999999999999999999998654322 233
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK 584 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 584 (626)
..++..|++||......++.++||||||+++|||++|+.||..... ........... ... ........
T Consensus 179 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~-~~~----------~~~~~~~~ 246 (303)
T 3a7i_A 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP-MKVLFLIPKNN-PPT----------LEGNYSKP 246 (303)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-HHHHHHHHHSC-CCC----------CCSSCCHH
T ss_pred cCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH-HHHHHHhhcCC-CCC----------CccccCHH
Confidence 4578889999998888889999999999999999999999874332 22222221111 100 01112234
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHHHH
Q 006903 585 LLQVALRCINQSPNERPSMNQVAVMI 610 (626)
Q Consensus 585 l~~l~~~Cl~~dP~~RPs~~ev~~~L 610 (626)
+.+++.+||+.||++|||+.|+++..
T Consensus 247 l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 247 LKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred HHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 78899999999999999999998753
No 182
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=5.7e-38 Score=331.74 Aligned_cols=249 Identities=20% Similarity=0.242 Sum_probs=175.8
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeC------CeEEEEE
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSK------QEKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~------~~~~lv~ 420 (626)
.+.||+|+||.||+|. ..+|+.||||++...... .+.+.+|+++++.++||||+++++++... ...++||
T Consensus 34 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~ 113 (367)
T 2fst_X 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113 (367)
T ss_dssp EEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEE
T ss_pred eeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEe
Confidence 4789999999999998 457999999999764432 35688999999999999999999998754 5579999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||+ +++|.+++.. ..+++..+..++.|+++||.||| +.||+||||||+|||++.++.+||+|||+++....
T Consensus 114 e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH----~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~ 184 (367)
T 2fst_X 114 HLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184 (367)
T ss_dssp ECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTCCEEECC---------
T ss_pred ccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH----HCCeeeCCCCHhhEEECCCCCEEEeeccccccccc
Confidence 999 6899998853 46899999999999999999999 57999999999999999999999999999976555
Q ss_pred Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccc------cccccHHHH
Q 006903 501 DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWT------VEVFDEVLI 573 (626)
Q Consensus 501 ~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~------~~~~d~~~~ 573 (626)
......++..|++||.... ..++.++|||||||++|||+||+.||...... +.+..+...... ..+......
T Consensus 185 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~~~~~~~~~~~~~~ 263 (367)
T 2fst_X 185 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPGAELLKKISSESAR 263 (367)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCCHHHHTTCCCHHHH
T ss_pred cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHHhhhHHHH
Confidence 4455677889999998765 67899999999999999999999999754332 222222111000 000000000
Q ss_pred ----h---------hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 574 ----A---------EAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 574 ----~---------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
. ..........+.+++.+||+.||++|||+.|+++.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 264 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0 00000112457899999999999999999999873
No 183
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=4.5e-38 Score=328.46 Aligned_cols=238 Identities=16% Similarity=0.272 Sum_probs=195.6
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||++... +++.||+|.+..... ..+.+.+|+.+++.++||||+++++++.+.+..++||||+++
T Consensus 46 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 125 (335)
T 2owb_A 46 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR 125 (335)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCC
Confidence 478999999999999954 588999999875432 235688999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC---Cc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH---DQ 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~---~~ 502 (626)
++|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++..... ..
T Consensus 126 ~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH----~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 198 (335)
T 2owb_A 126 RSLLELHKR---RKALTEPEARYYLRQIVLGCQYLH----RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 198 (335)
T ss_dssp CBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred CCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH----HCCCEecCCCchhEEEcCCCCEEEeeccCceecccCcccc
Confidence 999999853 246899999999999999999999 57999999999999999999999999999865432 22
Q ss_pred cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 503 SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
....++..|++||......++.++|||||||++|||+||+.||.... ..+............ +....
T Consensus 199 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-~~~~~~~~~~~~~~~------------~~~~~ 265 (335)
T 2owb_A 199 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC-LKETYLRIKKNEYSI------------PKHIN 265 (335)
T ss_dssp CCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS-HHHHHHHHHHTCCCC------------CTTSC
T ss_pred cccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC-HHHHHHHHhcCCCCC------------CccCC
Confidence 33457888999999888888999999999999999999999997543 222222222221110 01112
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..+.+++.+||+.||++|||++|+++
T Consensus 266 ~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 266 PVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp HHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 34778999999999999999999987
No 184
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=2.3e-38 Score=324.96 Aligned_cols=251 Identities=18% Similarity=0.297 Sum_probs=178.3
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC--CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS--ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|.. .+++.||||++.... ...+++.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 99 (303)
T 2vwi_A 20 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGS 99 (303)
T ss_dssp EEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCB
T ss_pred hheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCc
Confidence 47899999999999984 578999999987543 234678899999999999999999999999999999999999999
Q ss_pred hhHhhcC-----CCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC-
Q 006903 428 LFNLLHG-----SENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD- 501 (626)
Q Consensus 428 L~~~l~~-----~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~- 501 (626)
|.+++.. ......+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 100 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 175 (303)
T 2vwi_A 100 VLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH----KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGG 175 (303)
T ss_dssp HHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC---
T ss_pred hHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH----hCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCC
Confidence 9999853 112356899999999999999999999 579999999999999999999999999997543221
Q ss_pred -------ccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHH
Q 006903 502 -------QSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLI 573 (626)
Q Consensus 502 -------~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 573 (626)
.....++..|++||.... ..++.++|||||||++|||+||+.||................... ... ...
T Consensus 176 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~-~~~ 252 (303)
T 2vwi_A 176 DITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPS--LET-GVQ 252 (303)
T ss_dssp ------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCC--TTC----
T ss_pred CccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCc--ccc-ccc
Confidence 123457788999998754 457899999999999999999999997544333222221111100 000 000
Q ss_pred hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 574 AEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 574 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
...........+.+++.+||+.||++|||+.|+++
T Consensus 253 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 253 DKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp --CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 00011112335788999999999999999999987
No 185
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.3e-38 Score=323.97 Aligned_cols=238 Identities=18% Similarity=0.255 Sum_probs=189.7
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC---CHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI---SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|... +++.||||+++.... ...++.+|+..+..+ +||||+++++++.+++..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 95 (289)
T 1x8b_A 16 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNG 95 (289)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred hhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCC
Confidence 478999999999999964 799999999976432 335688999999998 999999999999999999999999999
Q ss_pred CChhHhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC-------------------CC
Q 006903 426 GSLFNLLHGSE-NGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN-------------------NM 485 (626)
Q Consensus 426 g~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~-------------------~~ 485 (626)
|+|.+++.... ....+++..+..++.|++.||.||| +++|+||||||+|||++. ..
T Consensus 96 ~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH----~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~ 171 (289)
T 1x8b_A 96 GSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH----SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV 171 (289)
T ss_dssp CBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEC--------------------CC
T ss_pred CcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH----hCCEeecCCCHHHEEEcCCCCCcccccccccccccCCce
Confidence 99999996421 1246899999999999999999999 579999999999999984 44
Q ss_pred CeEEeeccCccccCCCccccccccccchhhccccC-CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccc
Q 006903 486 EPCISEYGLIVTENHDQSFLAQTSSLKINDISNQM-CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWT 564 (626)
Q Consensus 486 ~~kl~DFGl~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 564 (626)
.+||+|||++....... ...++..|++||..... .++.++|||||||++|||++|.+++....... ...... .
T Consensus 172 ~~kl~Dfg~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~----~~~~~~-~ 245 (289)
T 1x8b_A 172 MFKIGDLGHVTRISSPQ-VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWH----EIRQGR-L 245 (289)
T ss_dssp CEEECCCTTCEETTCSC-CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHH----HHHTTC-C
T ss_pred EEEEcccccccccCCcc-ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHH----HHHcCC-C
Confidence 78999999987654433 23578889999987654 55679999999999999999998765432211 111111 1
Q ss_pred cccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 565 VEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 565 ~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.. .+......+.+++.+||+.||++|||+.|+++
T Consensus 246 ~~----------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 246 PR----------IPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp CC----------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CC----------CCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 11 01112235788999999999999999999976
No 186
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.2e-37 Score=317.13 Aligned_cols=238 Identities=20% Similarity=0.304 Sum_probs=196.1
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|... +++.||||.+.... ...+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 19 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 98 (284)
T 2vgo_A 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPR 98 (284)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred eheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCC
Confidence 478999999999999954 68899999986432 3346789999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC-Cccc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH-DQSF 504 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~-~~~~ 504 (626)
|+|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++..... ....
T Consensus 99 ~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 171 (284)
T 2vgo_A 99 GELYKELQKH---GRFDEQRSATFMEELADALHYCH----ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRT 171 (284)
T ss_dssp EEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBCC
T ss_pred CcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH----HCCceecCCCHHHEEEcCCCCEEEecccccccCccccccc
Confidence 9999999642 46899999999999999999999 68999999999999999999999999999865432 2233
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK 584 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 584 (626)
..++..|++||......++.++||||||+++|||++|+.||..... .+....+...... .+......
T Consensus 172 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~~~~~~~~~~~~------------~~~~~~~~ 238 (284)
T 2vgo_A 172 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH-TETHRRIVNVDLK------------FPPFLSDG 238 (284)
T ss_dssp CCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHTTCCC------------CCTTSCHH
T ss_pred ccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH-hHHHHHHhccccC------------CCCcCCHH
Confidence 4678889999998888889999999999999999999999975432 2222222222111 01112234
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHH
Q 006903 585 LLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 585 l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 239 SKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHhhcCHhhCCCHHHHhh
Confidence 788999999999999999999987
No 187
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=8.4e-38 Score=340.59 Aligned_cols=183 Identities=20% Similarity=0.232 Sum_probs=145.8
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeC-----CeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSK-----QEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~-----~~~~lv~E 421 (626)
.+.||+|+||.||+|.. .+++.||||++...... .+.+.+|++++++++|||||++++++... ...|+|||
T Consensus 58 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 137 (458)
T 3rp9_A 58 RHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLE 137 (458)
T ss_dssp CCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEC
T ss_pred eeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEe
Confidence 57899999999999984 47899999999764433 35688999999999999999999998543 56899999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD 501 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~ 501 (626)
|+ +|+|.+++.. ...+++..+..++.||+.||.||| +.+||||||||+|||++.++.+||+|||+++.....
T Consensus 138 ~~-~~~L~~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH----~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 209 (458)
T 3rp9_A 138 IA-DSDFKKLFRT---PVYLTELHIKTLLYNLLVGVKYVH----SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYP 209 (458)
T ss_dssp CC-SEEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSC
T ss_pred cc-ccchhhhccc---CCCCCHHHHHHHHHHHHHHHHHHH----hCCcCCCCCChhhEEECCCCCEeecccccchhccCc
Confidence 98 4799999963 356999999999999999999999 579999999999999999999999999998754311
Q ss_pred ------------------------------ccccccccccchhhcc-ccCCCCCcchhHHHHHHHHHHHcC
Q 006903 502 ------------------------------QSFLAQTSSLKINDIS-NQMCSTIKADVYGFGVILLELLTG 541 (626)
Q Consensus 502 ------------------------------~~~~~~~~~~~~pe~~-~~~~~~~k~DVwSfGvvl~elltg 541 (626)
.....++..|++||+. ....++.++|||||||++|||+||
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 210 ENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 1223568889999975 566789999999999999999993
No 188
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=334.10 Aligned_cols=201 Identities=20% Similarity=0.285 Sum_probs=156.5
Q ss_pred cchhhhhcccccccccCCCcceEEEEeC---CCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEe--CCe
Q 006903 341 LKFEDLLRAPAELLGRGKHGSLYRVVLD---DGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCS--KQE 415 (626)
Q Consensus 341 ~~~~~l~~~~~~~lG~G~fG~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~--~~~ 415 (626)
..+++.....++.||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++++++||||+++++++.. ...
T Consensus 16 ~~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 94 (405)
T 3rgf_A 16 ERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG-ISMSACREIALLRELKHPNVISLQKVFLSHADRK 94 (405)
T ss_dssp CCHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS-CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTE
T ss_pred hhhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC-CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCe
Confidence 3455665556778999999999999965 57899999997643 34578899999999999999999999965 668
Q ss_pred EEEEEeecCCCChhHhhcCC------CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee----CCCC
Q 006903 416 KLLVYEYQPNGSLFNLLHGS------ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF----NNNM 485 (626)
Q Consensus 416 ~~lv~Ey~~~g~L~~~l~~~------~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl----~~~~ 485 (626)
.++||||+. |+|.+++... .....+++..+..++.|++.||.||| +.+|+||||||+|||+ +.++
T Consensus 95 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH----~~~ivH~Dlkp~NIll~~~~~~~~ 169 (405)
T 3rgf_A 95 VWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH----ANWVLHRDLKPANILVMGEGPERG 169 (405)
T ss_dssp EEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECCSSTTTT
T ss_pred EEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH----hCCEeCCCcCHHHeEEecCCCCCC
Confidence 899999997 5888877421 12235899999999999999999999 5799999999999999 7788
Q ss_pred CeEEeeccCccccCCC------ccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCC
Q 006903 486 EPCISEYGLIVTENHD------QSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNN 547 (626)
Q Consensus 486 ~~kl~DFGl~~~~~~~------~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~ 547 (626)
.+||+|||+++..... .....++..|++||+... ..++.++|||||||++|||+||+.||..
T Consensus 170 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 238 (405)
T 3rgf_A 170 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 238 (405)
T ss_dssp CEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred cEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCC
Confidence 9999999998754321 223467889999998766 4589999999999999999999999963
No 189
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=4.8e-38 Score=335.25 Aligned_cols=252 Identities=17% Similarity=0.208 Sum_probs=194.1
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCC--------CCCccccceEEE----eCCeEE
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK--------HPNVLPPLAYYC----SKQEKL 417 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~--------H~nIv~l~g~~~----~~~~~~ 417 (626)
.+.||+|+||.||+|+ ..+++.||||+++......+.+.+|+++++.++ |+||+++++++. .....+
T Consensus 42 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~ 121 (397)
T 1wak_A 42 IRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHIC 121 (397)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEE
T ss_pred EEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEE
Confidence 4789999999999998 456899999999765444567889999998885 788999999987 456789
Q ss_pred EEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCC-CceeccCCCCCeeeCCCC-----------
Q 006903 418 LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELRED-GIAHGNLKSNNILFNNNM----------- 485 (626)
Q Consensus 418 lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~-~ivHrDlkp~NILl~~~~----------- 485 (626)
+||||+ +|+|.+++... ....+++..+..++.|++.||.||| ++ ||+||||||+|||++.++
T Consensus 122 lv~e~~-~~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH----~~~givHrDikp~NIll~~~~~~~~~~~~~~~ 195 (397)
T 1wak_A 122 MVFEVL-GHHLLKWIIKS-NYQGLPLPCVKKIIQQVLQGLDYLH----TKCRIIHTDIKPENILLSVNEQYIRRLAAEAT 195 (397)
T ss_dssp EEECCC-CCBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHH----HTTCEECCCCSGGGEEECCCHHHHHHHHHHHC
T ss_pred EEEecc-CccHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHH----HhCCEecCCCCHHHeeEeccchhhhhhhhhhH
Confidence 999999 56666666432 2356999999999999999999999 55 899999999999999775
Q ss_pred --------------------------------------CeEEeeccCccccCCCccccccccccchhhccccCCCCCcch
Q 006903 486 --------------------------------------EPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCSTIKAD 527 (626)
Q Consensus 486 --------------------------------------~~kl~DFGl~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~k~D 527 (626)
.+||+|||++...........++..|++||......++.++|
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 275 (397)
T 1wak_A 196 EWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPAD 275 (397)
T ss_dssp ---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHHH
T ss_pred HHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHHH
Confidence 799999999876655555567889999999998888999999
Q ss_pred hHHHHHHHHHHHcCCCCCCCCcc-----hhHHHHHHhh---c---------cccccccc------------------HHH
Q 006903 528 VYGFGVILLELLTGKLVQNNGFN-----LATWVHSVVR---E---------EWTVEVFD------------------EVL 572 (626)
Q Consensus 528 VwSfGvvl~elltg~~p~~~~~~-----~~~~~~~~~~---~---------~~~~~~~d------------------~~~ 572 (626)
||||||++|||+||+.||..... .......... . .+..+.+. ...
T Consensus 276 iwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (397)
T 1wak_A 276 IWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLV 355 (397)
T ss_dssp HHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhh
Confidence 99999999999999999963221 0111111100 0 00000000 000
Q ss_pred HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 573 IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 573 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.......+....+.+++.+||+.||++|||++|+++
T Consensus 356 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 356 EKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp HTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred hhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 001123556678999999999999999999999975
No 190
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=9.1e-38 Score=325.44 Aligned_cols=252 Identities=17% Similarity=0.297 Sum_probs=197.4
Q ss_pred ccccccCCCcceEEEEe--CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCC------ccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVL--DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPN------VLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~--~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~n------Iv~l~g~~~~~~~~~lv~Ey 422 (626)
.+.||+|+||.||+|.. .+++.||||+++......+.+.+|+++++.++|+| ++++++++...+..++||||
T Consensus 19 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~ 98 (339)
T 1z57_A 19 VDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFEL 98 (339)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEEC
T ss_pred EEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcC
Confidence 47899999999999985 46899999999765444567889999998887654 99999999999999999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC-------------------
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN------------------- 483 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~------------------- 483 (626)
+ +++|.+++... ....+++..+..++.|++.||+||| +++|+||||||+|||++.
T Consensus 99 ~-~~~l~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~ 172 (339)
T 1z57_A 99 L-GLSTYDFIKEN-GFLPFRLDHIRKMAYQICKSVNFLH----SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLI 172 (339)
T ss_dssp C-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEESCCCEEEEEC----CEEEEES
T ss_pred C-CCCHHHHHHhc-CCCCCcHHHHHHHHHHHHHHHHHHH----HCCCcCCCCCHHHEEEeccccccccCCcccccccccc
Confidence 9 88999999753 2346899999999999999999999 579999999999999987
Q ss_pred CCCeEEeeccCccccCCCccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhH--HHHHHhhc
Q 006903 484 NMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLAT--WVHSVVRE 561 (626)
Q Consensus 484 ~~~~kl~DFGl~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~--~~~~~~~~ 561 (626)
++.+||+|||++...........++..|++||......++.++|||||||++|||+||+.||........ .+......
T Consensus 173 ~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 252 (339)
T 1z57_A 173 NPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGP 252 (339)
T ss_dssp CCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCS
T ss_pred CCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Confidence 6689999999998765555556788999999999888889999999999999999999999975432211 11111110
Q ss_pred cccccc---------c---------------------cHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 562 EWTVEV---------F---------------------DEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 562 ~~~~~~---------~---------------------d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
..... + .+..............+.+++.+||+.||++|||+.|+++.
T Consensus 253 -~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 329 (339)
T 1z57_A 253 -LPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKH 329 (339)
T ss_dssp -CCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred -CCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcC
Confidence 00000 0 00000001122345678999999999999999999999853
No 191
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.1e-37 Score=342.17 Aligned_cols=241 Identities=22% Similarity=0.283 Sum_probs=197.3
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|... +|+.||||++.... ...+.+.+|++++++++||||+++++++...+..++||||+.+
T Consensus 31 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 110 (484)
T 3nyv_A 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 110 (484)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCC
Confidence 578999999999999954 79999999986543 3457899999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee---CCCCCeEEeeccCccccCCCc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF---NNNMEPCISEYGLIVTENHDQ 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGl~~~~~~~~ 502 (626)
|+|.+++.. ...+++..+..++.|++.||.||| +++|+||||||+|||+ +.++.+||+|||++.......
T Consensus 111 ~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 183 (484)
T 3nyv_A 111 GELFDEIIS---RKRFSEVDAARIIRQVLSGITYMH----KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 183 (484)
T ss_dssp CBHHHHHHT---CSCCBHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC
T ss_pred CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc
Confidence 999999964 346899999999999999999999 5799999999999999 567899999999986543322
Q ss_pred --cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHH
Q 006903 503 --SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 503 --~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
....+++.|++||.... .++.++||||+||++|||++|+.||... +..+....+........... ...
T Consensus 184 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~--------~~~ 253 (484)
T 3nyv_A 184 KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGA-NEYDILKKVEKGKYTFELPQ--------WKK 253 (484)
T ss_dssp SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCCCSGG--------GGG
T ss_pred ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHcCCCCCCCcc--------ccc
Confidence 33467889999998865 5889999999999999999999999754 33334444433332211110 011
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 581 RMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
....+.+++.+||+.||++|||+.|+++
T Consensus 254 ~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 254 VSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 2335788999999999999999999986
No 192
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=9.5e-38 Score=321.19 Aligned_cols=242 Identities=21% Similarity=0.299 Sum_probs=195.0
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|+. .+|+.||+|.++... ...+.+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 93 (304)
T 2jam_A 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGEL 93 (304)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred eeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccH
Confidence 47899999999999995 479999999997654 3446789999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee---CCCCCeEEeeccCccccCCC-ccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF---NNNMEPCISEYGLIVTENHD-QSF 504 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGl~~~~~~~-~~~ 504 (626)
.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+||++ ++++.+||+|||++...... ...
T Consensus 94 ~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 166 (304)
T 2jam_A 94 FDRILE---RGVYTEKDASLVIQQVLSAVKYLH----ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMST 166 (304)
T ss_dssp HHHHHH---HSCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTHH
T ss_pred HHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCcccc
Confidence 999853 246899999999999999999999 5799999999999999 78899999999998654332 223
Q ss_pred cccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHH
Q 006903 505 LAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLK 584 (626)
Q Consensus 505 ~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 584 (626)
..++..|++||......++.++|||||||++|||++|+.||.... ..+....+........ . .........
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-~~~~~~~i~~~~~~~~---~-----~~~~~~~~~ 237 (304)
T 2jam_A 167 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET-ESKLFEKIKEGYYEFE---S-----PFWDDISES 237 (304)
T ss_dssp HHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC-HHHHHHHHHHCCCCCC---T-----TTTTTSCHH
T ss_pred ccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC-HHHHHHHHHcCCCCCC---c-----cccccCCHH
Confidence 457888999999988888999999999999999999999987543 2233333332221110 0 001112345
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHH
Q 006903 585 LLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 585 l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+.+++.+||+.||++|||+.|+++
T Consensus 238 ~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 238 AKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp HHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHcCCChhHCcCHHHHhc
Confidence 888999999999999999999986
No 193
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=321.35 Aligned_cols=241 Identities=17% Similarity=0.291 Sum_probs=192.2
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
.+.||+|+||.||+|... +|+.||||.+.... ..+.+.+|++++++++||||+++++++...+..++||||+++|+|.
T Consensus 34 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 112 (314)
T 3com_A 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVS 112 (314)
T ss_dssp EEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHH
T ss_pred heeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHH
Confidence 478999999999999864 58999999997643 4567999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---ccccc
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QSFLA 506 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~~~~ 506 (626)
+++.. ....+++..+..++.+++.||.||| +.+|+||||||+||+++.++.+||+|||++...... .....
T Consensus 113 ~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 186 (314)
T 3com_A 113 DIIRL--RNKTLTEDEIATILQSTLKGLEYLH----FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVI 186 (314)
T ss_dssp HHHHH--HTCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCCCC
T ss_pred HHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH----hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCccC
Confidence 99962 2356899999999999999999999 579999999999999999999999999998653322 23345
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHH
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLL 586 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~ 586 (626)
++..|++||......++.++||||||+++|||++|+.||......... ....... ...... .......+.
T Consensus 187 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~-~~~~~~--------~~~~~~~l~ 256 (314)
T 3com_A 187 GTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAI-FMIPTNP-PPTFRK--------PELWSDNFT 256 (314)
T ss_dssp SCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-HHHHHSC-CCCCSS--------GGGSCHHHH
T ss_pred CCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHhcCC-CcccCC--------cccCCHHHH
Confidence 778899999988888899999999999999999999999754332222 1111111 000000 111223578
Q ss_pred HHHhhccCCCCCCCCCHHHHHH
Q 006903 587 QVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 587 ~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+++.+||+.||++|||+.|+++
T Consensus 257 ~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 257 DFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp HHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHHccCChhhCcCHHHHHh
Confidence 8999999999999999999976
No 194
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=2.1e-37 Score=325.37 Aligned_cols=251 Identities=18% Similarity=0.205 Sum_probs=189.8
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeC--------CeEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSK--------QEKLL 418 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~--------~~~~l 418 (626)
.+.||+|+||.||+|+. .+|+.||||++..... ....+.+|+++++.++||||+++++++... +..++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~l 101 (351)
T 3mi9_A 22 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYL 101 (351)
T ss_dssp EEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEE
T ss_pred EEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEE
Confidence 47899999999999996 5799999999865442 345788999999999999999999998873 46899
Q ss_pred EEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcccc
Q 006903 419 VYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTE 498 (626)
Q Consensus 419 v~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~ 498 (626)
||||+++ +|.+.+.. ....+++..+..++.|++.||.||| +.||+||||||+|||++.++.+||+|||+++..
T Consensus 102 v~e~~~~-~l~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~LH----~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 174 (351)
T 3mi9_A 102 VFDFCEH-DLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYIH----RNKILHRDMKAANVLITRDGVLKLADFGLARAF 174 (351)
T ss_dssp EEECCSE-EHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEeccCC-CHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHH----HCCeeCCCCCHHHEEEcCCCCEEEccchhcccc
Confidence 9999985 78777763 2346999999999999999999999 579999999999999999999999999998653
Q ss_pred CC-------Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhh--cccccccc
Q 006903 499 NH-------DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVR--EEWTVEVF 568 (626)
Q Consensus 499 ~~-------~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~--~~~~~~~~ 568 (626)
.. ......++..|++||.... ..++.++|||||||++|||+||+.||........ ...+.. .....+..
T Consensus 175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~ 253 (351)
T 3mi9_A 175 SLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ-LALISQLCGSITPEVW 253 (351)
T ss_dssp CCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCTTTS
T ss_pred cccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCChhhc
Confidence 21 1123456888999998754 4579999999999999999999999875433222 111111 00000000
Q ss_pred cHH------------------HHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 569 DEV------------------LIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 569 d~~------------------~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
... .............+.+++.+||+.||++|||++|+++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 254 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 000 00000000012347899999999999999999999873
No 195
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=5.1e-38 Score=338.25 Aligned_cols=257 Identities=17% Similarity=0.251 Sum_probs=188.2
Q ss_pred ccccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeC------CeEEEEEe
Q 006903 349 APAELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSK------QEKLLVYE 421 (626)
Q Consensus 349 ~~~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~------~~~~lv~E 421 (626)
...+.||+|+||.||+|+. .+|+.||||++.... ..+.+|++++++++|||||++++++... ...++|||
T Consensus 57 ~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e 133 (420)
T 1j1b_A 57 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 133 (420)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEE
T ss_pred EeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc---hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehh
Confidence 3457899999999999996 469999999986532 2344799999999999999999988642 13679999
Q ss_pred ecCCCChhHhhcC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC-CCeEEeeccCccccC
Q 006903 422 YQPNGSLFNLLHG-SENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN-MEPCISEYGLIVTEN 499 (626)
Q Consensus 422 y~~~g~L~~~l~~-~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGl~~~~~ 499 (626)
|+++ ++.+.+.. ......+++..+..++.||++||.||| +.+|+||||||+|||++.+ +.+||+|||+++...
T Consensus 134 ~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~ 208 (420)
T 1j1b_A 134 YVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208 (420)
T ss_dssp CCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH----TTTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred cccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCChhhEEEeCCCCeEEeccchhhhhcc
Confidence 9986 66665532 123457999999999999999999999 6899999999999999965 568999999997532
Q ss_pred C--Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc-cc------------
Q 006903 500 H--DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE-EW------------ 563 (626)
Q Consensus 500 ~--~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~-~~------------ 563 (626)
. ......++..|++||.... ..++.++|||||||++|||++|+.||.......... .+... ..
T Consensus 209 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~-~i~~~lg~p~~~~~~~~~~~ 287 (420)
T 1j1b_A 209 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV-EIIKVLGTPTREQIREMNPN 287 (420)
T ss_dssp TTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-HHHHHHCSCCHHHHHHHCSC
T ss_pred cCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHHHhCCCCHHHHHhhChh
Confidence 2 2233467889999998754 468999999999999999999999997654332222 21110 00
Q ss_pred ccccccHHH----HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhhh
Q 006903 564 TVEVFDEVL----IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINNIK 614 (626)
Q Consensus 564 ~~~~~d~~~----~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i~ 614 (626)
..+...+.+ ............+.+|+.+||+.||++|||+.|+++ .++++.
T Consensus 288 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 344 (420)
T 1j1b_A 288 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344 (420)
T ss_dssp CCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred hhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccc
Confidence 000000000 000011122346889999999999999999999986 344443
No 196
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=5.2e-38 Score=329.29 Aligned_cols=253 Identities=17% Similarity=0.204 Sum_probs=198.1
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCC------------------HHHHHHHHHHhccCCCCCccccceEEEe
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSIS------------------SEDFKNRMQKIDHVKHPNVLPPLAYYCS 412 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~------------------~~~~~~ei~~l~~l~H~nIv~l~g~~~~ 412 (626)
.+.||+|+||.||+|.. +|+.||||.+...... .+.+.+|++++++++||||+++++++..
T Consensus 36 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 114 (348)
T 2pml_X 36 IRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITN 114 (348)
T ss_dssp EEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEES
T ss_pred EEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEee
Confidence 47899999999999999 8999999998643211 1789999999999999999999999999
Q ss_pred CCeEEEEEeecCCCChhHh------hcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC
Q 006903 413 KQEKLLVYEYQPNGSLFNL------LHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME 486 (626)
Q Consensus 413 ~~~~~lv~Ey~~~g~L~~~------l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~ 486 (626)
.+..++||||+++|+|.++ +.. .....+++..+..++.|++.||.|||+ ..||+||||||+||+++.++.
T Consensus 115 ~~~~~lv~e~~~~~~L~~~~~~~~~l~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dl~p~Nil~~~~~~ 190 (348)
T 2pml_X 115 YDEVYIIYEYMENDSILKFDEYFFVLDK-NYTCFIPIQVIKCIIKSVLNSFSYIHN---EKNICHRDVKPSNILMDKNGR 190 (348)
T ss_dssp SSEEEEEEECCTTCBSSEESSSEESSCS-SSCCCCCHHHHHHHHHHHHHHHHHHHH---TSCEECCCCCGGGEEECTTSC
T ss_pred CCeEEEEEeccCCCcHHHHHHHhhhhhh-ccccCCCHHHHHHHHHHHHHHHHHHhc---cCCEeecCCChHhEEEcCCCc
Confidence 9999999999999999999 542 124679999999999999999999993 279999999999999999999
Q ss_pred eEEeeccCccccCC-CccccccccccchhhccccC-CCCC-cchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccc
Q 006903 487 PCISEYGLIVTENH-DQSFLAQTSSLKINDISNQM-CSTI-KADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEW 563 (626)
Q Consensus 487 ~kl~DFGl~~~~~~-~~~~~~~~~~~~~pe~~~~~-~~~~-k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 563 (626)
+||+|||++..... ......++..|++||..... .++. ++|||||||++|||+||+.||.......+....+.....
T Consensus 191 ~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~ 270 (348)
T 2pml_X 191 VKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNI 270 (348)
T ss_dssp EEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCC
T ss_pred EEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCc
Confidence 99999999875322 22344678889999998766 4555 999999999999999999999865553444444433221
Q ss_pred ccccc-----cHHH--HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 564 TVEVF-----DEVL--IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 564 ~~~~~-----d~~~--~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..... .+.. ............+.+++.+||+.||++|||+.|+++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 271 EYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp CCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11000 0000 000000122345889999999999999999999987
No 197
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=5.6e-38 Score=320.16 Aligned_cols=247 Identities=19% Similarity=0.250 Sum_probs=182.9
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCH---HHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~---~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|.. .+|+.||||+++...... +.+.++...++.++||||+++++++..++..++||||++ |
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 90 (290)
T 3fme_A 12 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD-T 90 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS-E
T ss_pred HHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc-c
Confidence 47899999999999995 579999999997653322 234445555888999999999999999999999999997 5
Q ss_pred ChhHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCC-CceeccCCCCCeeeCCCCCeEEeeccCccccCCC--c
Q 006903 427 SLFNLLHGS-ENGQSFDWGSRLRVAACVAKALALIHEELRED-GIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--Q 502 (626)
Q Consensus 427 ~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~-~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--~ 502 (626)
+|.+++... .....+++..+..++.|++.||.||| ++ +|+||||||+||+++.++.+||+|||++...... .
T Consensus 91 ~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 166 (290)
T 3fme_A 91 SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH----SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAK 166 (290)
T ss_dssp EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH----HHSCCCCCCCSGGGCEECTTCCEEBCCC------------
T ss_pred chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh----hcCCeecCCCCHHHEEECCCCCEEEeecCCcccccccccc
Confidence 888877531 23457999999999999999999999 44 8999999999999999999999999998654322 2
Q ss_pred cccccccccchhhcc----ccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 503 SFLAQTSSLKINDIS----NQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 503 ~~~~~~~~~~~pe~~----~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
....++..|++||.. ....++.++|||||||++|||+||+.||...................... .
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----------~ 236 (290)
T 3fme_A 167 DIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLP----------A 236 (290)
T ss_dssp ---CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCC----------T
T ss_pred cccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcc----------c
Confidence 234578889999985 45567889999999999999999999997544433333333322211110 0
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHh
Q 006903 579 EERMLKLLQVALRCINQSPNERPSMNQVAV--MINN 612 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~ 612 (626)
......+.+++.+||+.||++|||+.|+++ .+..
T Consensus 237 ~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~ 272 (290)
T 3fme_A 237 DKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTL 272 (290)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred ccCCHHHHHHHHHHhhcChhhCcCHHHHHhCccccc
Confidence 112235788999999999999999999987 4443
No 198
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=9e-38 Score=329.07 Aligned_cols=260 Identities=15% Similarity=0.209 Sum_probs=183.9
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCe-------EEEEEee
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQE-------KLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~-------~~lv~Ey 422 (626)
.+.||+|+||.||+|.. .+|+.||||++.......+.+.+|++.++.++||||+++++++...+. .++||||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~ 107 (360)
T 3e3p_A 28 ERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEY 107 (360)
T ss_dssp C----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEEC
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeec
Confidence 47899999999999996 568999999987655555677888999999999999999999876443 7899999
Q ss_pred cCCCChhHhhcC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC-CCCeEEeeccCccccCC
Q 006903 423 QPNGSLFNLLHG-SENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN-NMEPCISEYGLIVTENH 500 (626)
Q Consensus 423 ~~~g~L~~~l~~-~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGl~~~~~~ 500 (626)
+++ +|.+.+.. ......+++..+..++.|++.||.|||. ++.+|+||||||+|||++. ++.+||+|||+++....
T Consensus 108 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~--~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~ 184 (360)
T 3e3p_A 108 VPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHL--PSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSP 184 (360)
T ss_dssp CSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTS--TTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCT
T ss_pred ccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhC--CCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCC
Confidence 986 54443321 1234578999999999999999999993 3679999999999999997 89999999999875433
Q ss_pred C--ccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcc-cc------------
Q 006903 501 D--QSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREE-WT------------ 564 (626)
Q Consensus 501 ~--~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~-~~------------ 564 (626)
. .....++..|++||.... ..++.++|||||||++|||+||+.||....... ....+.+.. ..
T Consensus 185 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 263 (360)
T 3e3p_A 185 SEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAG-QLHEIVRVLGCPSREVLRKLNPSH 263 (360)
T ss_dssp TSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHHHCTTC
T ss_pred CCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHH-HHHHHHHHcCCCCHHHHHhcccch
Confidence 2 233456888999998754 447999999999999999999999997543322 222221110 00
Q ss_pred --ccccc-----HHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhhh
Q 006903 565 --VEVFD-----EVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINNIK 614 (626)
Q Consensus 565 --~~~~d-----~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i~ 614 (626)
....+ ..-............+.+++.+||+.||++|||+.|+++ .++++.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 322 (360)
T 3e3p_A 264 TDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH 322 (360)
T ss_dssp CCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred hhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence 00000 000000011123456889999999999999999999987 355544
No 199
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=8.6e-38 Score=323.43 Aligned_cols=249 Identities=18% Similarity=0.279 Sum_probs=191.3
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|.... .||+|.++.... ..+.+.+|+.++++++||||+++++++...+..++||||+++++
T Consensus 38 ~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~ 115 (319)
T 2y4i_B 38 GELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRT 115 (319)
T ss_dssp CCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEE
T ss_pred eeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCc
Confidence 5789999999999999754 499999875432 23568899999999999999999999999999999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC--------
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN-------- 499 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~-------- 499 (626)
|.+++.. ....+++..+..++.|++.||.||| +.+|+||||||+||+++ ++.+||+|||++....
T Consensus 116 L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH----~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~ 188 (319)
T 2y4i_B 116 LYSVVRD--AKIVLDVNKTRQIAQEIVKGMGYLH----AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRRE 188 (319)
T ss_dssp HHHHTTS--SCCCCCSHHHHHHHHHHHHHHHHHH----HTTCCCCCCCSTTEEEC---CCEECCCSCCC----------C
T ss_pred HHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH----hCCccccCCChhhEEEe-CCCEEEeecCCccccccccccccc
Confidence 9999964 2346899999999999999999999 57999999999999998 6799999999875421
Q ss_pred CCccccccccccchhhcccc---------CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccH
Q 006903 500 HDQSFLAQTSSLKINDISNQ---------MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDE 570 (626)
Q Consensus 500 ~~~~~~~~~~~~~~pe~~~~---------~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~ 570 (626)
.......++..|++||.... ..++.++|||||||++|||+||+.||.... ............. .....
T Consensus 189 ~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-~~~~~~~~~~~~~-~~~~~- 265 (319)
T 2y4i_B 189 DKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP-AEAIIWQMGTGMK-PNLSQ- 265 (319)
T ss_dssp CSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCC-HHHHHHHHHTTCC-CCCCC-
T ss_pred cccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHhccCCC-CCCCc-
Confidence 11123346788999998753 346889999999999999999999997432 2222222222211 11100
Q ss_pred HHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcccc
Q 006903 571 VLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEEER 619 (626)
Q Consensus 571 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~~~ 619 (626)
......+.+++.+||+.||++|||+.+++++|+++.....+
T Consensus 266 --------~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~ 306 (319)
T 2y4i_B 266 --------IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRR 306 (319)
T ss_dssp --------SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC------
T ss_pred --------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 01122478899999999999999999999999999876443
No 200
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.6e-37 Score=340.96 Aligned_cols=242 Identities=19% Similarity=0.234 Sum_probs=195.9
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCC---CCCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDW---SISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|.. .+++.||||++... ....+.+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~ 106 (486)
T 3mwu_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106 (486)
T ss_dssp EEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCC
Confidence 57899999999999995 47899999998643 245678999999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeC---CCCCeEEeeccCccccCCC--
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFN---NNMEPCISEYGLIVTENHD-- 501 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~---~~~~~kl~DFGl~~~~~~~-- 501 (626)
+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++ .++.+||+|||+++.....
T Consensus 107 ~L~~~~~~---~~~~~~~~~~~i~~qi~~al~~lH----~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 179 (486)
T 3mwu_A 107 ELFDEIIK---RKRFSEHDAARIIKQVFSGITYMH----KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179 (486)
T ss_dssp BHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC--
T ss_pred cHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCc
Confidence 99998853 246899999999999999999999 57999999999999995 4567999999998754332
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
.....+++.|++||.... .++.++||||+||++|||++|+.||... +..+....+........... ....
T Consensus 180 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~--------~~~~ 249 (486)
T 3mwu_A 180 MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK-NEYDILKRVETGKYAFDLPQ--------WRTI 249 (486)
T ss_dssp --CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHTCCCSCSGG--------GGGS
T ss_pred cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhCCCCCCCcc--------cCCC
Confidence 233467889999999865 4889999999999999999999999754 33344444433322211110 0112
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
...+.+++.+||+.||++|||+.|+++.
T Consensus 250 s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 250 SDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 2347889999999999999999999873
No 201
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.9e-38 Score=320.55 Aligned_cols=247 Identities=20% Similarity=0.263 Sum_probs=194.8
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEe--CCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCS--KQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~--~~~~~lv~Ey~~ 424 (626)
.+.||+|+||.||+|.. .+++.||+|.+...... .+.+.+|++++++++||||+++++++.. ....++||||++
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~ 90 (279)
T 2w5a_A 11 LYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCE 90 (279)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCT
T ss_pred ehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCC
Confidence 47899999999999985 47899999999765433 3568899999999999999999998754 567899999999
Q ss_pred CCChhHhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHhccCCC-----ceeccCCCCCeeeCCCCCeEEeeccCcccc
Q 006903 425 NGSLFNLLHGSE-NGQSFDWGSRLRVAACVAKALALIHEELREDG-----IAHGNLKSNNILFNNNMEPCISEYGLIVTE 498 (626)
Q Consensus 425 ~g~L~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~-----ivHrDlkp~NILl~~~~~~kl~DFGl~~~~ 498 (626)
+|+|.+++.... ....+++..++.++.|++.||.|||+ .+ |+||||||+||+++.++.+||+|||++...
T Consensus 91 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~----~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~ 166 (279)
T 2w5a_A 91 GGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR----RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166 (279)
T ss_dssp TEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH----HC------CCCCCSGGGEEECSSSCEEECCCCHHHHC
T ss_pred CCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhc----ccCCCCeeEEeccchhhEEEcCCCCEEEecCchheee
Confidence 999999996421 23458999999999999999999995 45 999999999999999999999999998654
Q ss_pred CCCc---cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhh
Q 006903 499 NHDQ---SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 499 ~~~~---~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
.... ....++..|++||......++.++||||||+++|||+||+.||... +..+....+...... .
T Consensus 167 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-~~~~~~~~i~~~~~~-~--------- 235 (279)
T 2w5a_A 167 NHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF-SQKELAGKIREGKFR-R--------- 235 (279)
T ss_dssp ---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHTCCC-C---------
T ss_pred ccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCccc-CHHHHHHHHhhcccc-c---------
Confidence 3322 2235678899999988888899999999999999999999998743 222333332222111 1
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 006903 576 AASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNI 613 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i 613 (626)
.+......+.+++.+||+.||++|||+.|+++.+...
T Consensus 236 -~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~ 272 (279)
T 2w5a_A 236 -IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLIL 272 (279)
T ss_dssp -CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCC
T ss_pred -CCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhh
Confidence 0111233588899999999999999999998876543
No 202
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.1e-37 Score=326.05 Aligned_cols=244 Identities=19% Similarity=0.252 Sum_probs=191.6
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC--HHHHHHHHHH-hccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS--SEDFKNRMQK-IDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~--~~~~~~ei~~-l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|.. .+|+.||||+++..... ..++..|+.. ++.++||||+++++++..++..++||||+++
T Consensus 56 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~- 134 (340)
T 3an0_A 56 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT- 134 (340)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE-
T ss_pred eeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC-
Confidence 47899999999999995 67999999999765433 2455566665 7889999999999999999999999999975
Q ss_pred ChhHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc--c
Q 006903 427 SLFNLLHGS-ENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--S 503 (626)
Q Consensus 427 ~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--~ 503 (626)
+|.+++... .....+++..+..++.|++.||.|||+. .+|+||||||+|||++.++.+||+|||+++...... .
T Consensus 135 ~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 211 (340)
T 3an0_A 135 SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK---LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKT 211 (340)
T ss_dssp EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHHHHH
T ss_pred cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc---CCeecCCCCHHHEEECCCCCEEEeeCCCceecccccccc
Confidence 998888531 1345799999999999999999999942 389999999999999999999999999986543321 2
Q ss_pred ccccccccchhhccc----cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccH
Q 006903 504 FLAQTSSLKINDISN----QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASE 579 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~----~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 579 (626)
...++..|++||... ...++.++|||||||++|||+||+.||.........+........... . . .
T Consensus 212 ~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~-----~----~ 281 (340)
T 3an0_A 212 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQL-P-----A----D 281 (340)
T ss_dssp HSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCC-C-----G----G
T ss_pred cCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCCCCC-C-----c----c
Confidence 235788999999853 346789999999999999999999999754443333333332221110 0 0 1
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 580 ERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 580 ~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.....+.+++.+||+.||++|||+.|+++
T Consensus 282 ~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 282 KFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp GSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 12335888999999999999999999987
No 203
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.5e-37 Score=328.34 Aligned_cols=243 Identities=21% Similarity=0.336 Sum_probs=194.1
Q ss_pred cccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC--C-------HHHHHHHHHHhccC-CCCCccccceEEEeCCeEEE
Q 006903 350 PAELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI--S-------SEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLL 418 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~--~-------~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~l 418 (626)
..+.||+|+||.||+|... +|+.||||+++.... . .+.+.+|+.+++++ +||||+++++++...+..++
T Consensus 98 ~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 177 (365)
T 2y7j_A 98 PKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFL 177 (365)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEE
T ss_pred cceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEE
Confidence 3478999999999999964 799999999875432 1 24578899999998 79999999999999999999
Q ss_pred EEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcccc
Q 006903 419 VYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTE 498 (626)
Q Consensus 419 v~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~ 498 (626)
||||+++|+|.+++.. ...+++..+..++.|++.||.||| +.||+||||||+|||++.++.+||+|||++...
T Consensus 178 v~e~~~g~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH----~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~ 250 (365)
T 2y7j_A 178 VFDLMRKGELFDYLTE---KVALSEKETRSIMRSLLEAVSFLH----ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHL 250 (365)
T ss_dssp EECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEECCCCCEEEEecCccccc
Confidence 9999999999999963 246899999999999999999999 579999999999999999999999999998654
Q ss_pred CCC--ccccccccccchhhcccc------CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccH
Q 006903 499 NHD--QSFLAQTSSLKINDISNQ------MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDE 570 (626)
Q Consensus 499 ~~~--~~~~~~~~~~~~pe~~~~------~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~ 570 (626)
... .....++..|++||.... ..++.++|||||||++|||+||+.||..... ......+........ .+
T Consensus 251 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-~~~~~~i~~~~~~~~--~~ 327 (365)
T 2y7j_A 251 EPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ-ILMLRMIMEGQYQFS--SP 327 (365)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHTCCCCC--HH
T ss_pred CCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhCCCCCC--Cc
Confidence 322 234567889999998753 2468899999999999999999999975432 222222222211110 00
Q ss_pred HHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 571 VLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 571 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.. . .....+.+++.+||+.||++|||+.|+++
T Consensus 328 ~~--~----~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 328 EW--D----DRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HH--S----SSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred cc--c----cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00 0 12235788999999999999999999976
No 204
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-37 Score=326.33 Aligned_cols=251 Identities=18% Similarity=0.225 Sum_probs=191.2
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC------HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS------SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~------~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 15 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 94 (346)
T 1ua2_A 15 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM 94 (346)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcC
Confidence 47899999999999995 46899999999753321 246889999999999999999999999999999999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC--
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD-- 501 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~-- 501 (626)
++ +|.+++.. ....+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 95 ~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 167 (346)
T 1ua2_A 95 ET-DLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLH----QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR 167 (346)
T ss_dssp SE-EHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC
T ss_pred CC-CHHHHHHh--cCcCCCHHHHHHHHHHHHHHHHHHH----HCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCcc
Confidence 86 89988863 3356889999999999999999999 579999999999999999999999999998754322
Q ss_pred -ccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccc-c-ccccc--------
Q 006903 502 -QSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEW-T-VEVFD-------- 569 (626)
Q Consensus 502 -~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~-~-~~~~d-------- 569 (626)
.....++..|++||.... ..++.++|||||||++|||++|..||....... .+..+..... . .+...
T Consensus 168 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~ 246 (346)
T 1ua2_A 168 AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-QLTRIFETLGTPTEEQWPDMCSLPDY 246 (346)
T ss_dssp CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTTSSSTTSSTTC
T ss_pred cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHcCCCChhhhhhhccCccc
Confidence 233457888999998754 457899999999999999999999887544332 2222221100 0 00000
Q ss_pred ------HHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 570 ------EVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 570 ------~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
+..............+.+++.+||+.||++|||+.|+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 247 VTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp CCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000000011223468899999999999999999999874
No 205
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=4.5e-39 Score=340.84 Aligned_cols=254 Identities=11% Similarity=0.017 Sum_probs=177.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC----HHHHHHH---HHHhccCCCCCccccc-------eEEEeC--
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS----SEDFKNR---MQKIDHVKHPNVLPPL-------AYYCSK-- 413 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~----~~~~~~e---i~~l~~l~H~nIv~l~-------g~~~~~-- 413 (626)
.+.||+|+||.||+|.. .+|+.||||++...... .+.+.+| ++.++. +||||++++ +++..+
T Consensus 67 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~~ 145 (371)
T 3q60_A 67 VEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQSQ 145 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEETTS
T ss_pred eeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheecCCC
Confidence 47899999999999995 47999999999875532 2456777 455566 799988755 444332
Q ss_pred ---------------CeEEEEEeecCCCChhHhhcCCCCCCCCCHHHH------HHHHHHHHHHHHHHHHhccCCCceec
Q 006903 414 ---------------QEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSR------LRVAACVAKALALIHEELREDGIAHG 472 (626)
Q Consensus 414 ---------------~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~------~~i~~~ia~gL~ylH~~~~~~~ivHr 472 (626)
...++||||++ |+|.+++... ...+.+..+ +.++.|++.||+||| +++|+||
T Consensus 146 ~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH----~~~ivHr 218 (371)
T 3q60_A 146 PPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL--DFVYVFRGDEGILALHILTAQLIRLAANLQ----SKGLVHG 218 (371)
T ss_dssp CSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH--HHSCCCCHHHHHHHHHHHHHHHHHHHHHHH----HTTEEET
T ss_pred CCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh--ccccchhhhhhhhhHHHHHHHHHHHHHHHH----HCCCccC
Confidence 33799999999 8999999742 223455566 788899999999999 5799999
Q ss_pred cCCCCCeeeCCCCCeEEeeccCccccCCCccccccccccchhhcccc--CCCCCcchhHHHHHHHHHHHcCCCCCCCCcc
Q 006903 473 NLKSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQ--MCSTIKADVYGFGVILLELLTGKLVQNNGFN 550 (626)
Q Consensus 473 Dlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~k~DVwSfGvvl~elltg~~p~~~~~~ 550 (626)
||||+|||++.++.+||+|||+++..........++..|++||.... ..++.++|||||||++|||+||+.||.....
T Consensus 219 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~ 298 (371)
T 3q60_A 219 HFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTP 298 (371)
T ss_dssp TCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCT
T ss_pred cCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCc
Confidence 99999999999999999999999876544434445689999999876 6789999999999999999999999974321
Q ss_pred hhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhhhhc
Q 006903 551 LATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINNIKEE 616 (626)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i~~~ 616 (626)
.... .................. ........+.+++.+||+.||++|||+.|+++ .++++...
T Consensus 299 ~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~ 362 (371)
T 3q60_A 299 GIKG---SWKRPSLRVPGTDSLAFG-SCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNE 362 (371)
T ss_dssp TCTT---CCCBCCTTSCCCCSCCCT-TSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHHHH
T ss_pred cccc---chhhhhhhhccccccchh-hccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHHHH
Confidence 1000 000000000000000000 00122345888999999999999999999976 55555443
No 206
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=6.9e-38 Score=321.54 Aligned_cols=242 Identities=17% Similarity=0.285 Sum_probs=190.0
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|... +++.||+|.+.... ...+.+.+|+++++.++||||+++++++...+..++||||+++++|
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l 103 (302)
T 2j7t_A 24 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV 103 (302)
T ss_dssp EEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEH
T ss_pred cceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcH
Confidence 478999999999999965 58999999987654 4557899999999999999999999999999999999999999999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC---CCcccc
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN---HDQSFL 505 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~---~~~~~~ 505 (626)
.+++.. ....+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++.... ......
T Consensus 104 ~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 177 (302)
T 2j7t_A 104 DAIMLE--LDRGLTEPQIQVVCRQMLEALNFLH----SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF 177 (302)
T ss_dssp HHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC----
T ss_pred HHHHHh--hccCCCHHHHHHHHHHHHHHHHHHh----cCCcccCCCCHHHEEECCCCCEEEEECCCCccccccccccccc
Confidence 999863 2346899999999999999999999 5799999999999999999999999999864311 112234
Q ss_pred ccccccchhhcc-----ccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHH
Q 006903 506 AQTSSLKINDIS-----NQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEE 580 (626)
Q Consensus 506 ~~~~~~~~pe~~-----~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 580 (626)
.++..|++||.. ....++.++||||||+++|||+||+.||..... .............. ... ...
T Consensus 178 ~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~-~~~--------~~~ 247 (302)
T 2j7t_A 178 IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-MRVLLKIAKSDPPT-LLT--------PSK 247 (302)
T ss_dssp -CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH-HHHHHHHHHSCCCC-CSS--------GGG
T ss_pred cCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH-HHHHHHHhccCCcc-cCC--------ccc
Confidence 577889999986 355678899999999999999999999875432 22222222221111 000 111
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 581 RMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 581 ~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
....+.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 248 WSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp SCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred cCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 2235788999999999999999999976
No 207
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2e-37 Score=317.61 Aligned_cols=251 Identities=17% Similarity=0.225 Sum_probs=191.5
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC---CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI---SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|+.. +|+.||||+++.... ..+.+.+|++++++++||||+++++++..++..++||||+. |
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~ 86 (299)
T 2r3i_A 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-Q 86 (299)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred hhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-C
Confidence 478999999999999964 789999999875432 23678899999999999999999999999999999999997 6
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC---cc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD---QS 503 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~---~~ 503 (626)
+|.+++... ....+++..+..++.|++.||.||| +.||+||||||+||+++.++.+||+|||++...... ..
T Consensus 87 ~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 161 (299)
T 2r3i_A 87 DLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCH----SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 161 (299)
T ss_dssp EHHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTT
T ss_pred CHHHHHHhh-hccCCCHHHHHHHHHHHHHHHHHHH----HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccccC
Confidence 999999643 2346899999999999999999999 579999999999999999999999999998653321 22
Q ss_pred ccccccccchhhccccCC-CCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc-cccccc----------ccHH
Q 006903 504 FLAQTSSLKINDISNQMC-STIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE-EWTVEV----------FDEV 571 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~-~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~-~~~~~~----------~d~~ 571 (626)
...++..|++||...... ++.++|||||||++|||+||+.||......... ...... ....+. ..+.
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (299)
T 2r3i_A 162 HEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL-FRIFRTLGTPDEVVWPGVTSMPDYKPS 240 (299)
T ss_dssp SCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-HHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred cccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHH-HHHHHHhCCCchhhhhHhhcCcccchh
Confidence 335678899999876544 789999999999999999999999765443222 222211 000000 0000
Q ss_pred HHh------hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 572 LIA------EAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 572 ~~~------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
... ..........+.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp SCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000 0000112345789999999999999999999987
No 208
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=9.9e-38 Score=323.85 Aligned_cols=242 Identities=17% Similarity=0.261 Sum_probs=188.0
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC---------CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI---------SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---------~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 420 (626)
.+.||+|+||.||+|.. .+++.||||.+..... ....+.+|++++++++||||+++++++..++ .++||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv~ 93 (322)
T 2ycf_A 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVL 93 (322)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEEE
T ss_pred eeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEEE
Confidence 57899999999999985 4689999999875431 1235889999999999999999999987654 89999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC---eEEeeccCccc
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME---PCISEYGLIVT 497 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGl~~~ 497 (626)
||+++|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++. +||+|||++..
T Consensus 94 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 166 (322)
T 2ycf_A 94 ELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLH----ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166 (322)
T ss_dssp ECCTTEETHHHHST---TCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEE
T ss_pred ecCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHEEEecCCCCCeEEEccCcccee
Confidence 99999999999953 357899999999999999999999 579999999999999987654 99999999876
Q ss_pred cCCCc--cccccccccchhhccc---cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHH
Q 006903 498 ENHDQ--SFLAQTSSLKINDISN---QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVL 572 (626)
Q Consensus 498 ~~~~~--~~~~~~~~~~~pe~~~---~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 572 (626)
..... ....++..|++||... ...++.++|||||||++|||+||+.||............+...... ..+..
T Consensus 167 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~---~~~~~ 243 (322)
T 2ycf_A 167 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN---FIPEV 243 (322)
T ss_dssp CCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCC---CCHHH
T ss_pred cccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccc---cCchh
Confidence 54332 2345788999999863 4567899999999999999999999997543322222222221111 01111
Q ss_pred HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 573 IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 573 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
. ......+.+++.+||+.||++|||+.|+++
T Consensus 244 ~-----~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 244 W-----AEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp H-----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred h-----hhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 0 112345889999999999999999999975
No 209
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.1e-37 Score=328.05 Aligned_cols=248 Identities=19% Similarity=0.247 Sum_probs=189.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCCeE------EEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEK------LLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~------~lv~ 420 (626)
.+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|+.+++.++||||+++++++...+.. ++||
T Consensus 47 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~ 126 (371)
T 4exu_A 47 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 126 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEE
T ss_pred EeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEE
Confidence 47899999999999984 56999999999765433 35788999999999999999999999877654 9999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||+. |+|.+++. ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 127 e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 196 (371)
T 4exu_A 127 PFMQ-TDLQKIMG-----MEFSEEKIQYLVYQMLKGLKYIH----SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA 196 (371)
T ss_dssp ECCC-EEHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTCCEEECSTTCC-----
T ss_pred cccc-ccHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHH----HCCCcCCCcCHHHeEECCCCCEEEEecCccccccc
Confidence 9997 68988884 24899999999999999999999 57999999999999999999999999999976655
Q ss_pred Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcc-cc-----cccccHHHH
Q 006903 501 DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREE-WT-----VEVFDEVLI 573 (626)
Q Consensus 501 ~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~-~~-----~~~~d~~~~ 573 (626)
......++..|++||.... ..++.++|||||||++|||+||+.||...... +....+.... .. ....+....
T Consensus 197 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~ 275 (371)
T 4exu_A 197 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTGVPGTEFVQKLNDKAAK 275 (371)
T ss_dssp ---CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCHHHHTTCSCHHHH
T ss_pred CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCcHHHHHHhhhhhhh
Confidence 5555667889999998765 67899999999999999999999999754332 2222221110 00 000000000
Q ss_pred ----h---------hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 574 ----A---------EAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 574 ----~---------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
. ....+.....+.+++.+||+.||++|||+.|+++.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 276 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0 00011123468899999999999999999999873
No 210
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2.1e-37 Score=340.68 Aligned_cols=241 Identities=20% Similarity=0.233 Sum_probs=191.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC---CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|+. .++..||||++.... ...+.+.+|+++++.++|||||++++++.+.+..++||||+++|
T Consensus 42 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 121 (494)
T 3lij_A 42 VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGG 121 (494)
T ss_dssp EEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCC
Confidence 57899999999999995 478999999997643 23567899999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC---CCeEEeeccCccccCCC--
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN---MEPCISEYGLIVTENHD-- 501 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGl~~~~~~~-- 501 (626)
+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.. +.+||+|||++......
T Consensus 122 ~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~ 194 (494)
T 3lij_A 122 ELFDEIIH---RMKFNEVDAAVIIKQVLSGVTYLH----KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK 194 (494)
T ss_dssp BHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBC
T ss_pred cHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCcc
Confidence 99998853 246899999999999999999999 5799999999999999764 45999999998654332
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
.....+++.|++||+.. ..++.++|||||||++|||++|+.||... ...+....+......... +. ....
T Consensus 195 ~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~~i~~~~~~~~~--~~------~~~~ 264 (494)
T 3lij_A 195 MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQ-TDQEILRKVEKGKYTFDS--PE------WKNV 264 (494)
T ss_dssp BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHTCCCCCS--GG------GTTS
T ss_pred ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhCCCCCCc--hh------cccC
Confidence 23356888999999876 45889999999999999999999999754 333444444333222111 00 0112
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
...+.+++.+||+.||++|||+.|+++
T Consensus 265 s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 265 SEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 235788999999999999999999986
No 211
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.9e-37 Score=341.74 Aligned_cols=241 Identities=19% Similarity=0.240 Sum_probs=193.3
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC--------------CCHHHHHHHHHHhccCCCCCccccceEEEeCCe
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS--------------ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQE 415 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--------------~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~ 415 (626)
.+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|++++++++||||+++++++.+...
T Consensus 41 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 120 (504)
T 3q5i_A 41 VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKY 120 (504)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred EeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence 47899999999999995 468899999987543 224678999999999999999999999999999
Q ss_pred EEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC---CeEEeec
Q 006903 416 KLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM---EPCISEY 492 (626)
Q Consensus 416 ~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~---~~kl~DF 492 (626)
.++||||+++|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++ .+||+||
T Consensus 121 ~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Df 193 (504)
T 3q5i_A 121 FYLVTEFYEGGELFEQIIN---RHKFDECDAANIMKQILSGICYLH----KHNIVHRDIKPENILLENKNSLLNIKIVDF 193 (504)
T ss_dssp EEEEEECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEESSTTCCSSEEECCC
T ss_pred EEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeEeCCCcHHHEEEecCCCCccEEEEEC
Confidence 9999999999999999863 246899999999999999999999 57999999999999999775 6999999
Q ss_pred cCccccCCC--ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccH
Q 006903 493 GLIVTENHD--QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDE 570 (626)
Q Consensus 493 Gl~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~ 570 (626)
|++...... .....+++.|++||.... .++.++||||+||++|||++|+.||... +..+....+.........
T Consensus 194 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~~i~~~~~~~~~--- 268 (504)
T 3q5i_A 194 GLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQ-NDQDIIKKVEKGKYYFDF--- 268 (504)
T ss_dssp TTCEECCTTSCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCCCH---
T ss_pred CCCEEcCCCCccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHcCCCCCCc---
Confidence 998754332 234567889999998764 5789999999999999999999999753 334444444433221110
Q ss_pred HHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 571 VLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 571 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
... . .....+.+++.+||+.||++|||++|+++
T Consensus 269 ~~~-~----~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 269 NDW-K----NISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp HHH-T----TSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccc-C----CCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 000 1 12235888999999999999999999986
No 212
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.4e-37 Score=330.75 Aligned_cols=195 Identities=18% Similarity=0.254 Sum_probs=166.3
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCC-CC-----CccccceEEEeCCeEEEEEeec
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK-HP-----NVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~-H~-----nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
.+.||+|+||.||+|.. .+++.||||+++......+++.+|+++++.++ |+ +|+++++++...+..++||||+
T Consensus 59 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~ 138 (382)
T 2vx3_A 59 DSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML 138 (382)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECC
T ss_pred EEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecC
Confidence 47899999999999985 46889999999764444466778888887775 44 4999999999999999999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeC--CCCCeEEeeccCccccCCC
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFN--NNMEPCISEYGLIVTENHD 501 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~--~~~~~kl~DFGl~~~~~~~ 501 (626)
+ |+|.+++.... ...+++..+..++.|++.||.|||.+ ..+||||||||+|||++ .++.+||+|||+++.....
T Consensus 139 ~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~--~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~ 214 (382)
T 2vx3_A 139 S-YNLYDLLRNTN-FRGVSLNLTRKFAQQMCTALLFLATP--ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR 214 (382)
T ss_dssp C-CBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHTST--TTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTCC
T ss_pred C-CCHHHHHhhcC-cCCCCHHHHHHHHHHHHHHHHHhccC--CCCEEcCCCCcccEEEecCCCCcEEEEeccCceecccc
Confidence 6 59999997532 24689999999999999999999942 57899999999999994 5788999999999876555
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCc
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGF 549 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~ 549 (626)
.....++..|++||......++.++|||||||++|||+||+.||....
T Consensus 215 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 215 IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 555678889999999988889999999999999999999999997543
No 213
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.9e-37 Score=326.96 Aligned_cols=250 Identities=18% Similarity=0.239 Sum_probs=185.8
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCC------------HHHHHHHHHHhccCCCCCccccceEEEeC-----
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSIS------------SEDFKNRMQKIDHVKHPNVLPPLAYYCSK----- 413 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~------------~~~~~~ei~~l~~l~H~nIv~l~g~~~~~----- 413 (626)
.+.||+|+||.||+|...+|+.||||++...... .+.+.+|++++++++||||+++++++...
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 106 (362)
T 3pg1_A 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAM 106 (362)
T ss_dssp EEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTC
T ss_pred eEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCc
Confidence 4789999999999999888999999998653321 26789999999999999999999998543
Q ss_pred CeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeecc
Q 006903 414 QEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYG 493 (626)
Q Consensus 414 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 493 (626)
...++||||++ |+|.+++.. ....+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||
T Consensus 107 ~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 179 (362)
T 3pg1_A 107 HKLYLVTELMR-TDLAQVIHD--QRIVISPQHIQYFMYHILLGLHVLH----EAGVVHRDLHPGNILLADNNDITICDFN 179 (362)
T ss_dssp CEEEEEEECCS-EEHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTCCEEECCTT
T ss_pred ceEEEEEccCC-CCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHH----HCcCEecCCChHHEEEcCCCCEEEEecC
Confidence 35799999998 688888863 3357999999999999999999999 5799999999999999999999999999
Q ss_pred CccccCC--Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccccccc-
Q 006903 494 LIVTENH--DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFD- 569 (626)
Q Consensus 494 l~~~~~~--~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d- 569 (626)
++..... ......++..|++||.... ..++.++|||||||++|||+||+.||...... +....+..........+
T Consensus 180 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~ 258 (362)
T 3pg1_A 180 LAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY-NQLNKIVEVVGTPKIEDV 258 (362)
T ss_dssp C---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCHHHH
T ss_pred cccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHcCCCChHHh
Confidence 9864322 2233467788999998765 66899999999999999999999999754322 22222211100000000
Q ss_pred -----HHH--------------HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 570 -----EVL--------------IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 570 -----~~~--------------~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+.. ......+.....+.+++.+||+.||++|||+.|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 259 VMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 000 000001112345889999999999999999999987
No 214
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2.6e-37 Score=327.37 Aligned_cols=247 Identities=16% Similarity=0.234 Sum_probs=185.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCC------eEEEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQ------EKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~------~~~lv~ 420 (626)
.+.||+|+||.||+|.. .+++.||||++...... .+.+.+|+++++.++||||+++++++...+ ..++||
T Consensus 30 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~ 109 (371)
T 2xrw_A 30 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 109 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEE
T ss_pred eeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEE
Confidence 47899999999999984 56899999999764433 356889999999999999999999987654 689999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||++ |+|.+++. ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 110 e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~lH----~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 179 (371)
T 2xrw_A 110 ELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 179 (371)
T ss_dssp ECCS-EEHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTSCEEECCCCC------
T ss_pred EcCC-CCHHHHHh-----hccCHHHHHHHHHHHHHHHHHHH----HCCeecccCCHHHEEEcCCCCEEEEEeeccccccc
Confidence 9997 47888885 24889999999999999999999 57999999999999999999999999999875433
Q ss_pred C--ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccc--c---ccccH---
Q 006903 501 D--QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWT--V---EVFDE--- 570 (626)
Q Consensus 501 ~--~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~--~---~~~d~--- 570 (626)
. .....++..|++||......++.++|||||||++|||+||+.||........+. .+...... . ....+
T Consensus 180 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~ 258 (371)
T 2xrw_A 180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN-KVIEQLGTPCPEFMKKLQPTVR 258 (371)
T ss_dssp ----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-HHHC-CCCCCHHHHTTSCHHHH
T ss_pred ccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHHHhCCCCHHHHHHhhhHHH
Confidence 2 233467888999999988888999999999999999999999997654433222 22111000 0 00000
Q ss_pred --------------------HHHh--hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 571 --------------------VLIA--EAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 571 --------------------~~~~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.... ..........+.+++.+||+.||++|||++|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 259 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp HHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 0000 0011223557899999999999999999999987
No 215
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=4.6e-38 Score=320.94 Aligned_cols=249 Identities=21% Similarity=0.306 Sum_probs=188.4
Q ss_pred ccccccCCCcceEEEEeC--CCc--EEEEEEcCCCCC----CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVLD--DGL--MLAVKRLRDWSI----SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~--~g~--~vAvK~l~~~~~----~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey 422 (626)
.+.||+|+||.||+|... +++ .||||.++.... ..+.+.+|++++++++||||+++++++...+ .++||||
T Consensus 23 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~ 101 (291)
T 1u46_A 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTEL 101 (291)
T ss_dssp EEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEEC
T ss_pred eeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEec
Confidence 478999999999999853 333 699999875432 2357889999999999999999999987655 8899999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ 502 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~ 502 (626)
+++|+|.+++... ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 102 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 175 (291)
T 1u46_A 102 APLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLE----SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175 (291)
T ss_dssp CTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-C
T ss_pred ccCCCHHHHHHhc--cCCcCHHHHHHHHHHHHHHHHHHH----hCCcccCCCchheEEEcCCCCEEEccccccccccccc
Confidence 9999999999642 246899999999999999999999 5799999999999999999999999999986543322
Q ss_pred ------cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhh
Q 006903 503 ------SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 503 ------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
....++..|++||......++.++||||||+++|||++ |+.||... +..+.............
T Consensus 176 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~-~~~~~~~~~~~~~~~~~--------- 245 (291)
T 1u46_A 176 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-NGSQILHKIDKEGERLP--------- 245 (291)
T ss_dssp CEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC-CHHHHHHHHHTSCCCCC---------
T ss_pred cchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccC-CHHHHHHHHHccCCCCC---------
Confidence 12345567999999877778899999999999999999 99998643 33333333333221111
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 576 AASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
........+.+++.+||+.||++|||+.++++.|+++....
T Consensus 246 -~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 246 -RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp -CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred -CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 01122345888999999999999999999999999886543
No 216
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.1e-38 Score=331.45 Aligned_cols=241 Identities=21% Similarity=0.287 Sum_probs=192.3
Q ss_pred ccccccCCCcceEEEEe----CCCcEEEEEEcCCCC-----CCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEE
Q 006903 351 AELLGRGKHGSLYRVVL----DDGLMLAVKRLRDWS-----ISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~----~~g~~vAvK~l~~~~-----~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~ 420 (626)
.+.||+|+||.||+|+. .+++.||||+++... ...+.+.+|+++++++ +||||+++++++..++..++||
T Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 138 (355)
T 1vzo_A 59 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLIL 138 (355)
T ss_dssp EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEE
T ss_pred EEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEe
Confidence 47899999999999986 478999999987532 3346678899999999 6999999999999999999999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||+++|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 139 e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 211 (355)
T 1vzo_A 139 DYINGGELFTHLSQ---RERFTEHEVQIYVGEIVLALEHLH----KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVA 211 (355)
T ss_dssp CCCCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCG
T ss_pred ecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCcEEEeeCCCCeeccc
Confidence 99999999999964 246899999999999999999999 57999999999999999999999999999865322
Q ss_pred C----ccccccccccchhhcccc--CCCCCcchhHHHHHHHHHHHcCCCCCCCCc---chhHHHHHHhhcccccccccHH
Q 006903 501 D----QSFLAQTSSLKINDISNQ--MCSTIKADVYGFGVILLELLTGKLVQNNGF---NLATWVHSVVREEWTVEVFDEV 571 (626)
Q Consensus 501 ~----~~~~~~~~~~~~pe~~~~--~~~~~k~DVwSfGvvl~elltg~~p~~~~~---~~~~~~~~~~~~~~~~~~~d~~ 571 (626)
. .....++..|++||.... ..++.++|||||||++|||+||+.||.... ...............
T Consensus 212 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~------- 284 (355)
T 1vzo_A 212 DETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP------- 284 (355)
T ss_dssp GGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCC-------
T ss_pred CCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCC-------
Confidence 1 223467889999998764 346889999999999999999999986322 222222222221110
Q ss_pred HHhhhccHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHHH
Q 006903 572 LIAEAASEERMLKLLQVALRCINQSPNERP-----SMNQVAVMI 610 (626)
Q Consensus 572 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~ev~~~L 610 (626)
.+.+....+.+++.+||+.||++|| +++|+++..
T Consensus 285 -----~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 285 -----YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp -----CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred -----CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 1112233578899999999999999 999997743
No 217
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=9.1e-38 Score=320.16 Aligned_cols=242 Identities=20% Similarity=0.330 Sum_probs=186.3
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEe-------------CCeE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCS-------------KQEK 416 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~-------------~~~~ 416 (626)
.+.||+|+||.||+|+. .+++.||||++.......+.+.+|++++++++||||+++++++.. .+..
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (303)
T 1zy4_A 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTL 90 (303)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEE
T ss_pred hheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCce
Confidence 47899999999999995 579999999996544445678999999999999999999998865 3567
Q ss_pred EEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcc
Q 006903 417 LLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIV 496 (626)
Q Consensus 417 ~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~ 496 (626)
++||||+++|+|.+++.. ....+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||++.
T Consensus 91 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~LH----~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 164 (303)
T 1zy4_A 91 FIQMEYCENGTLYDLIHS--ENLNQQRDEYWRLFRQILEALSYIH----SQGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164 (303)
T ss_dssp EEEEECCCSCBHHHHHHH--SCGGGCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEECTTSCEEECCCCCCS
T ss_pred EEEEecCCCCCHHHhhhc--cccccchHHHHHHHHHHHHHHHHHH----hCCeecccCCHHhEEEcCCCCEEEeeCcchh
Confidence 999999999999999974 2346788999999999999999999 5799999999999999999999999999986
Q ss_pred ccCCC-----------------ccccccccccchhhccccC-CCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHH
Q 006903 497 TENHD-----------------QSFLAQTSSLKINDISNQM-CSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSV 558 (626)
Q Consensus 497 ~~~~~-----------------~~~~~~~~~~~~pe~~~~~-~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~ 558 (626)
..... .....++..|++||..... .++.++|||||||++|||++ |+..+.+..+.....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~ 241 (303)
T 1zy4_A 165 NVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKL 241 (303)
T ss_dssp CTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHH
T ss_pred hcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhc
Confidence 53211 1223467889999987654 67899999999999999998 554333333333322
Q ss_pred hhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 559 VREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 559 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
...... +. ..........+.+++.+||+.||++|||+.|+++.
T Consensus 242 ~~~~~~---~~-----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 242 RSVSIE---FP-----PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HSTTCC---CC-----TTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred cccccc---cC-----ccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 221110 00 01122233457889999999999999999999873
No 218
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=2.1e-37 Score=337.99 Aligned_cols=251 Identities=13% Similarity=0.161 Sum_probs=195.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCcc-ccceEEEeCCeEEEEEeecCCCCh
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVL-PPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv-~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
.+.||+|+||.||+|.. .+++.||||++.... ..+++.+|+++++.++|++.+ .+..++...+..++||||+ +++|
T Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL 89 (483)
T 3sv0_A 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSL 89 (483)
T ss_dssp CCCCEECSSCEEEEEEETTTCCEEEEEEEETTC-SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEEeeCCCEEEEEEEECCCCcEEEEEEecccc-ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCH
Confidence 47899999999999994 679999999876543 234688999999999885544 4455556677889999999 9999
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee---CCCCCeEEeeccCccccCCCc---
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF---NNNMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGl~~~~~~~~--- 502 (626)
.+++... ...+++..++.|+.||+.||.||| +.+||||||||+|||+ +.++.+||+|||+++......
T Consensus 90 ~~ll~~~--~~~l~~~~~~~i~~qi~~aL~yLH----~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (483)
T 3sv0_A 90 EDLFNFC--SRKLSLKTVLMLADQMINRVEFVH----SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQ 163 (483)
T ss_dssp HHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred HHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHH----HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcccc
Confidence 9999632 346999999999999999999999 5799999999999999 688999999999987543221
Q ss_pred -------cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcc--hhHHHHHHhhcccccccccHHHH
Q 006903 503 -------SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFN--LATWVHSVVREEWTVEVFDEVLI 573 (626)
Q Consensus 503 -------~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~ 573 (626)
....++..|++||......++.++|||||||++|||++|+.||..... ..+.+..+...... ... ..+
T Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~-~~~-~~l- 240 (483)
T 3sv0_A 164 HIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVA-TSI-EAL- 240 (483)
T ss_dssp BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHH-SCH-HHH-
T ss_pred ccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcccc-ccH-HHH-
Confidence 145678899999999888899999999999999999999999974322 22222222111100 000 000
Q ss_pred hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhc
Q 006903 574 AEAASEERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEE 616 (626)
Q Consensus 574 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~ 616 (626)
.......+.+++.+||+.||++||++.+|++.|+++...
T Consensus 241 ----~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 241 ----CRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp ----HTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ----hcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 011234588999999999999999999999999988653
No 219
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=6.9e-38 Score=330.21 Aligned_cols=251 Identities=20% Similarity=0.247 Sum_probs=192.7
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
.+.||+|+||.||+|... +++.||+|++..... ..+.+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 38 ~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 117 (360)
T 3eqc_A 38 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS 117 (360)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCB
T ss_pred eeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCC
Confidence 478999999999999954 789999999876432 23578999999999999999999999999999999999999999
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC-CCccccc
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN-HDQSFLA 506 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~-~~~~~~~ 506 (626)
|.+++.. ...+++..+..++.+++.||.|||+ .++|+||||||+|||++.++.+||+|||++.... .......
T Consensus 118 L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lh~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 191 (360)
T 3eqc_A 118 LDQVLKK---AGRIPEQILGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 191 (360)
T ss_dssp HHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----C
T ss_pred HHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---hCCEEcCCccHHHEEECCCCCEEEEECCCCcccccccccCCC
Confidence 9999964 2468999999999999999999994 2389999999999999999999999999985421 1223346
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHh---hccc--------------------
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVV---REEW-------------------- 563 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~---~~~~-------------------- 563 (626)
++..|++||......++.++|||||||++|||+||+.||...... +...... ....
T Consensus 192 gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (360)
T 3eqc_A 192 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK-ELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMD 270 (360)
T ss_dssp CCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHH-HHHHHHC---------------------------
T ss_pred CCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHhcccccccCCCCCCCcccCCCcccccccC
Confidence 788999999998888899999999999999999999998743211 1100000 0000
Q ss_pred ------ccccccHHHHhh---hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 564 ------TVEVFDEVLIAE---AASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 564 ------~~~~~d~~~~~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
..+..+...... .........+.+++.+||+.||++|||++|+++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 271 SRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp ---CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 000000000000 000112345889999999999999999999987
No 220
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=323.58 Aligned_cols=242 Identities=17% Similarity=0.312 Sum_probs=190.0
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccC-CCCCccccceEEEe------CCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHV-KHPNVLPPLAYYCS------KQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~------~~~~~lv~Ey 422 (626)
.+.||+|+||.||+|+. .+++.||||++.......+.+.+|+++++++ +||||+++++++.. .+..++||||
T Consensus 29 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~ 108 (326)
T 2x7f_A 29 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEF 108 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEEC
T ss_pred EEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEc
Confidence 47899999999999995 5789999999987666678899999999998 89999999999887 4678999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC-
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD- 501 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~- 501 (626)
+++|+|.+++... ....+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 109 ~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 183 (326)
T 2x7f_A 109 CGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLH----QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV 183 (326)
T ss_dssp CTTEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEECTTCCEEECCCTTTC------
T ss_pred CCCCcHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCc
Confidence 9999999999743 2346899999999999999999999 579999999999999999999999999998653321
Q ss_pred --ccccccccccchhhccc-----cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHh
Q 006903 502 --QSFLAQTSSLKINDISN-----QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIA 574 (626)
Q Consensus 502 --~~~~~~~~~~~~pe~~~-----~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 574 (626)
.....++..|++||... ...++.++|||||||++|||+||+.||....... ........... ...
T Consensus 184 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~-~~~------ 255 (326)
T 2x7f_A 184 GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR-ALFLIPRNPAP-RLK------ 255 (326)
T ss_dssp -------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSCCC-CCS------
T ss_pred cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH-HHHHhhcCccc-cCC------
Confidence 22345788899999875 4567899999999999999999999997543322 22222211111 000
Q ss_pred hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 575 EAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 575 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.......+.+++.+||+.||++|||+.|+++
T Consensus 256 ---~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 256 ---SKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp ---CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ---ccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0111235788999999999999999999987
No 221
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=6.6e-38 Score=334.55 Aligned_cols=257 Identities=17% Similarity=0.237 Sum_probs=188.7
Q ss_pred cccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeCCe------EEEEEeec
Q 006903 350 PAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQE------KLLVYEYQ 423 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~------~~lv~Ey~ 423 (626)
..+.||+|+||.||+|+..++..||+|++..... ...+|+++++.++||||+++++++...+. .++||||+
T Consensus 44 ~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~---~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~ 120 (394)
T 4e7w_A 44 NCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR---FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYV 120 (394)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT---SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECC
T ss_pred EeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc---hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeecc
Confidence 3578999999999999987777799998864332 22379999999999999999999865443 78999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeC-CCCCeEEeeccCccccCC--
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFN-NNMEPCISEYGLIVTENH-- 500 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFGl~~~~~~-- 500 (626)
+++.+............+++..+..++.|+++||.||| +.+|+||||||+|||++ .++.+||+|||+++....
T Consensus 121 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~ 196 (394)
T 4e7w_A 121 PETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH----SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE 196 (394)
T ss_dssp SEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred CccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH----HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCC
Confidence 87544433322223457899999999999999999999 57999999999999999 799999999999875322
Q ss_pred Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc--------------cccc
Q 006903 501 DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE--------------EWTV 565 (626)
Q Consensus 501 ~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~--------------~~~~ 565 (626)
......++..|++||.... ..++.++|||||||++|||++|+.||.......... .+... .+..
T Consensus 197 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~-~i~~~~g~p~~~~~~~~~~~~~~ 275 (394)
T 4e7w_A 197 PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLV-EIIKVLGTPSREQIKTMNPNYME 275 (394)
T ss_dssp CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-HHHHHHCCCCHHHHHHHCGGGSS
T ss_pred CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHHHhCCCCHHHHHhhChhhhh
Confidence 2233456888999998754 458999999999999999999999997554332222 11110 0000
Q ss_pred ccc---cHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHhhh
Q 006903 566 EVF---DEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM--INNIK 614 (626)
Q Consensus 566 ~~~---d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~--L~~i~ 614 (626)
..+ .+..............+.+++.+||+.||++|||+.|+++. +++++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 329 (394)
T 4e7w_A 276 HKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR 329 (394)
T ss_dssp SCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred hccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence 000 00000000111233468899999999999999999999873 44444
No 222
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.4e-37 Score=353.36 Aligned_cols=238 Identities=17% Similarity=0.217 Sum_probs=197.1
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC----CCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~ 424 (626)
.++||+|+||.||+|+. .+++.||||+++... ...+.+..|.+++..+ +||||+++++++.+.+..|+||||++
T Consensus 346 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~ 425 (674)
T 3pfq_A 346 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 425 (674)
T ss_dssp EEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCC
T ss_pred EEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcC
Confidence 47899999999999995 468899999987532 3446788899999887 79999999999999999999999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccC---CC
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTEN---HD 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~---~~ 501 (626)
+|+|.+++... ..+++..+..++.||+.||.||| +.+||||||||+|||++.++.+||+|||+++... ..
T Consensus 426 gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH----~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~ 498 (674)
T 3pfq_A 426 GGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQ----SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT 498 (674)
T ss_dssp SCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHH----HTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCC
T ss_pred CCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH----hCCeEeccCChhhEEEcCCCcEEEeecceeeccccCCcc
Confidence 99999999642 46999999999999999999999 5799999999999999999999999999987522 22
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
.....+++.|++||+.....++.++|||||||++|||+||+.||... +..+....+....... +...
T Consensus 499 ~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~-~~~~~~~~i~~~~~~~------------p~~~ 565 (674)
T 3pfq_A 499 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE-DEDELFQSIMEHNVAY------------PKSM 565 (674)
T ss_dssp BCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHSSCCCC------------CTTS
T ss_pred cccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCC-CHHHHHHHHHhCCCCC------------CccC
Confidence 33456899999999998888999999999999999999999999753 4444444444432111 1112
Q ss_pred HHHHHHHHhhccCCCCCCCCCH-----HHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSM-----NQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~-----~ev~~ 608 (626)
...+.+++.+||+.||++||++ +||.+
T Consensus 566 s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 566 SKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp CHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred CHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 2357889999999999999998 66654
No 223
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.5e-37 Score=352.01 Aligned_cols=249 Identities=19% Similarity=0.260 Sum_probs=198.5
Q ss_pred cccccccCCCcceEEEEeC----CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeec
Q 006903 350 PAELLGRGKHGSLYRVVLD----DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQ 423 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~----~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~ 423 (626)
..+.||+|+||.||+|... .+..||||.++.... ..+.+.+|+.++++++||||+++++++ .++..++||||+
T Consensus 394 i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~-~~~~~~lv~E~~ 472 (656)
T 2j0j_A 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELC 472 (656)
T ss_dssp EEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-CSSSCEEEEECC
T ss_pred EeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-ecCceEEEEEcC
Confidence 4578999999999999863 256899999876432 236789999999999999999999987 456789999999
Q ss_pred CCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc-
Q 006903 424 PNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ- 502 (626)
Q Consensus 424 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~- 502 (626)
++|+|.+++... ...+++..++.++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 473 ~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH----~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~ 546 (656)
T 2j0j_A 473 TLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLE----SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 546 (656)
T ss_dssp TTCBHHHHHHHT--TTTCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC---
T ss_pred CCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHH----hCCccccccchHhEEEeCCCCEEEEecCCCeecCCCcc
Confidence 999999999742 346899999999999999999999 5799999999999999999999999999987643322
Q ss_pred ---cccccccccchhhccccCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhcc
Q 006903 503 ---SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAAS 578 (626)
Q Consensus 503 ---~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 578 (626)
....++..|++||......++.++|||||||++|||++ |+.||... ...+....+...... . .+
T Consensus 547 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~-~~~~~~~~i~~~~~~-~----------~~ 614 (656)
T 2j0j_A 547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV-KNNDVIGRIENGERL-P----------MP 614 (656)
T ss_dssp -------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-CHHHHHHHHHHTCCC-C----------CC
T ss_pred eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCC-CHHHHHHHHHcCCCC-C----------CC
Confidence 12334568999999888888999999999999999997 88888643 333333333222111 0 11
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 579 EERMLKLLQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 579 ~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
......+.+++.+||+.||++|||+.|+++.|+++.+++
T Consensus 615 ~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 615 PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 122345888999999999999999999999999987543
No 224
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.4e-37 Score=313.25 Aligned_cols=239 Identities=18% Similarity=0.294 Sum_probs=188.3
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|... +|+.||||.+.... ...+.+.+|++.++.++||||+++++++...+..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 95 (276)
T 2h6d_A 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95 (276)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCC
Confidence 478999999999999965 79999999986432 3346789999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc--c
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--S 503 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--~ 503 (626)
++|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++....... .
T Consensus 96 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~ 168 (276)
T 2h6d_A 96 GELFDYICK---HGRVEEMEARRLFQQILSAVDYCH----RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR 168 (276)
T ss_dssp CBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH----HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-----
T ss_pred CcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH----HCCCccCCCChhhEEECCCCCEEEeecccccccCCCccee
Confidence 999999963 246899999999999999999999 5689999999999999999999999999987543322 2
Q ss_pred ccccccccchhhccccCCC-CCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHH
Q 006903 504 FLAQTSSLKINDISNQMCS-TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERM 582 (626)
Q Consensus 504 ~~~~~~~~~~pe~~~~~~~-~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 582 (626)
...++..|++||......+ +.++||||||+++|||++|+.||... ........+...... .+....
T Consensus 169 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~-~~~~~~~~~~~~~~~------------~~~~~~ 235 (276)
T 2h6d_A 169 TSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE-HVPTLFKKIRGGVFY------------IPEYLN 235 (276)
T ss_dssp --------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCC------------CCTTSC
T ss_pred cccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC-cHHHHHHHhhcCccc------------CchhcC
Confidence 3456788999999876654 68999999999999999999999753 222333322222111 001112
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 583 LKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 583 ~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
..+.+++.+||+.||++|||+.|+++.
T Consensus 236 ~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 236 RSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 347789999999999999999999873
No 225
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=4.2e-37 Score=332.41 Aligned_cols=186 Identities=20% Similarity=0.247 Sum_probs=157.7
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeC-----CeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSK-----QEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~-----~~~~lv~E 421 (626)
.+.||+|+||.||+|.. .+++.||||+++..... .+.+.+|++++++++||||+++++++... +..|+|||
T Consensus 31 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e 110 (432)
T 3n9x_A 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLE 110 (432)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEE
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEe
Confidence 47899999999999984 56899999999764433 35788999999999999999999998776 56899999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD 501 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~ 501 (626)
|+. |+|.+++.. ...+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 111 ~~~-~~L~~~~~~---~~~l~~~~~~~i~~qil~aL~~LH----~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 182 (432)
T 3n9x_A 111 IAD-SDLKKLFKT---PIFLTEEHIKTILYNLLLGENFIH----ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSE 182 (432)
T ss_dssp CCS-EEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC---
T ss_pred cCC-cCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH----HCCCCCCCCCHHHeEECCCCCEEEccCCCccccccc
Confidence 986 599999963 356999999999999999999999 579999999999999999999999999998754321
Q ss_pred -------------------------ccccccccccchhhcc-ccCCCCCcchhHHHHHHHHHHHcCCCC
Q 006903 502 -------------------------QSFLAQTSSLKINDIS-NQMCSTIKADVYGFGVILLELLTGKLV 544 (626)
Q Consensus 502 -------------------------~~~~~~~~~~~~pe~~-~~~~~~~k~DVwSfGvvl~elltg~~p 544 (626)
.....++..|++||.. ....++.++|||||||++|||++|..|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p 251 (432)
T 3n9x_A 183 KDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQS 251 (432)
T ss_dssp ----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTT
T ss_pred ccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccc
Confidence 1334678899999975 566789999999999999999985443
No 226
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.2e-37 Score=331.35 Aligned_cols=250 Identities=17% Similarity=0.223 Sum_probs=186.5
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEeC----------------
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCSK---------------- 413 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~---------------- 413 (626)
.+.||+|+||.||+|.. .+|+.||||++.... ....+|+++++.++||||+++++++...
T Consensus 12 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~ 88 (383)
T 3eb0_A 12 GKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP---RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNK 88 (383)
T ss_dssp EEEEECC-CEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHTTCCCTTBCCEEEEEEEC----------------
T ss_pred EEEEEeccCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHHcCCCCccchhheeeecCccccccccccccccc
Confidence 47899999999999984 679999999986543 2234799999999999999999998543
Q ss_pred ----------------------CeEEEEEeecCCCChhHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCce
Q 006903 414 ----------------------QEKLLVYEYQPNGSLFNLLHGS-ENGQSFDWGSRLRVAACVAKALALIHEELREDGIA 470 (626)
Q Consensus 414 ----------------------~~~~lv~Ey~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~iv 470 (626)
...++||||++ |+|.+.+... .....+++..+..++.|+++||.||| +.||+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~gi~ 163 (383)
T 3eb0_A 89 LGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH----SLGIC 163 (383)
T ss_dssp ---------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH----TTTEE
T ss_pred ccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCcCc
Confidence 33789999998 5887777521 23457999999999999999999999 78999
Q ss_pred eccCCCCCeeeC-CCCCeEEeeccCccccCC--Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCC
Q 006903 471 HGNLKSNNILFN-NNMEPCISEYGLIVTENH--DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQN 546 (626)
Q Consensus 471 HrDlkp~NILl~-~~~~~kl~DFGl~~~~~~--~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~ 546 (626)
||||||+|||++ .++.+||+|||+++.... ......++..|++||.... ..++.++|||||||++|||++|+.||.
T Consensus 164 H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 243 (383)
T 3eb0_A 164 HRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFS 243 (383)
T ss_dssp CSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred cCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCC
Confidence 999999999998 688999999999875322 2234456888999998765 458999999999999999999999997
Q ss_pred CCcchhHHHHHHhhcccc-c-----------cc----ccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 547 NGFNLATWVHSVVREEWT-V-----------EV----FDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~-~-----------~~----~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.................. . +. ..........+......+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 244 GETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA 321 (383)
T ss_dssp CSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 654433322211100000 0 00 00000000011123345889999999999999999999985
No 227
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=4.3e-37 Score=323.28 Aligned_cols=247 Identities=18% Similarity=0.234 Sum_probs=188.2
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEeCCe------EEEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQE------KLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~------~~lv~ 420 (626)
.+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|+.+++.++||||+++++++...+. .++||
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 108 (353)
T 3coi_A 29 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 108 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEE
T ss_pred eeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEe
Confidence 47899999999999985 56999999999765433 3568899999999999999999999887654 49999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||+. |+|.+++. ..+++..+..++.|++.||.||| +.||+||||||+||+++.++.+||+|||++.....
T Consensus 109 e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~LH----~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 178 (353)
T 3coi_A 109 PFMQ-TDLQKIMG-----LKFSEEKIQYLVYQMLKGLKYIH----SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA 178 (353)
T ss_dssp ECCS-EEGGGTTT-----SCCCHHHHHHHHHHHHHHHHHHH----HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC---
T ss_pred cccc-CCHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEeECCCCcEEEeecccccCCCC
Confidence 9997 68988874 24899999999999999999999 57999999999999999999999999999876555
Q ss_pred Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccc------ccccccHHHH
Q 006903 501 DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEW------TVEVFDEVLI 573 (626)
Q Consensus 501 ~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~------~~~~~d~~~~ 573 (626)
......++..|++||.... ..++.++|||||||++|||+||+.||..... .+....+..... .....+....
T Consensus 179 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 257 (353)
T 3coi_A 179 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY-LDQLTQILKVTGVPGTEFVQKLNDKAAK 257 (353)
T ss_dssp -----CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCH-HHHHHHHHHHHCBCCHHHHTTCSCHHHH
T ss_pred CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHHHhhHHHH
Confidence 4445567889999998765 6778999999999999999999999975432 222222211100 0000000000
Q ss_pred -------------hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 574 -------------AEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 574 -------------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
...........+.+++.+||+.||++|||++|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 258 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00001122446889999999999999999999986
No 228
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=5.1e-37 Score=322.09 Aligned_cols=259 Identities=17% Similarity=0.294 Sum_probs=198.1
Q ss_pred ccccccCCCcceEEEEeC-CC-cEEEEEEcCCCCCCHHHHHHHHHHhccCCCCC------ccccceEEEeCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVLD-DG-LMLAVKRLRDWSISSEDFKNRMQKIDHVKHPN------VLPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g-~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~n------Iv~l~g~~~~~~~~~lv~Ey 422 (626)
.+.||+|+||.||+|... ++ +.||+|+++......+.+.+|++++++++|++ ++.+.+++...+..++||||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~ 103 (355)
T 2eu9_A 24 VGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFEL 103 (355)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEEC
T ss_pred EEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEec
Confidence 478999999999999853 44 78999999765445567889999999887766 89999999999999999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeee-------------------CC
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILF-------------------NN 483 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl-------------------~~ 483 (626)
+ ++++.+++... ....+++..+..++.|++.||.||| +.+|+||||||+|||+ +.
T Consensus 104 ~-~~~l~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~lH----~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~ 177 (355)
T 2eu9_A 104 L-GKNTFEFLKEN-NFQPYPLPHVRHMAYQLCHALRFLH----ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVK 177 (355)
T ss_dssp C-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHH----TTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEES
T ss_pred c-CCChHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEEecccccccccccccccccccC
Confidence 9 66777777542 2346899999999999999999999 6899999999999999 56
Q ss_pred CCCeEEeeccCccccCCCccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHH--HHHHhhc
Q 006903 484 NMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATW--VHSVVRE 561 (626)
Q Consensus 484 ~~~~kl~DFGl~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~--~~~~~~~ 561 (626)
++.+||+|||+++..........++..|++||......++.++|||||||++|||+||+.||......... +......
T Consensus 178 ~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 257 (355)
T 2eu9_A 178 NTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGP 257 (355)
T ss_dssp CCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred CCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCC
Confidence 78999999999987655555567889999999998888899999999999999999999999754332211 1111110
Q ss_pred c--------------------cccccccHHHHh---------hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HH
Q 006903 562 E--------------------WTVEVFDEVLIA---------EAASEERMLKLLQVALRCINQSPNERPSMNQVAV--MI 610 (626)
Q Consensus 562 ~--------------------~~~~~~d~~~~~---------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L 610 (626)
. +.....+..... ..........+.+++.+||+.||++|||+.|+++ .+
T Consensus 258 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f 337 (355)
T 2eu9_A 258 IPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 337 (355)
T ss_dssp CCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGG
T ss_pred CcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhh
Confidence 0 000000000000 0011233457889999999999999999999985 45
Q ss_pred Hhhhh
Q 006903 611 NNIKE 615 (626)
Q Consensus 611 ~~i~~ 615 (626)
..+..
T Consensus 338 ~~~~~ 342 (355)
T 2eu9_A 338 AGLTP 342 (355)
T ss_dssp GGCCH
T ss_pred cCCCh
Confidence 55443
No 229
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=6.1e-37 Score=314.97 Aligned_cols=240 Identities=21% Similarity=0.280 Sum_probs=188.9
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCC-----CCHHHHHHHHHHhccCCCCCccccceEEE--eCCeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWS-----ISSEDFKNRMQKIDHVKHPNVLPPLAYYC--SKQEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-----~~~~~~~~ei~~l~~l~H~nIv~l~g~~~--~~~~~~lv~Ey 422 (626)
.+.||+|+||.||++.. .+++.||+|+++... ...+.+.+|++++++++||||+++++++. ..+..++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 89 (305)
T 2wtk_C 10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEY 89 (305)
T ss_dssp CCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEEC
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehh
Confidence 47899999999999995 568999999997532 23467899999999999999999999984 44578999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC-
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD- 501 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~- 501 (626)
+++| |.+++... ....+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 90 ~~~~-l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH----~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~ 163 (305)
T 2wtk_C 90 CVCG-MQEMLDSV-PEKRFPVCQAHGYFCQLIDGLEYLH----SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163 (305)
T ss_dssp CSEE-HHHHHHHS-TTCSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC
T ss_pred ccCC-HHHHHHhC-cccccCHHHHHHHHHHHHHHHHHHH----HCCeeecCCCcccEEEcCCCcEEeeccccccccCccc
Confidence 9876 77777542 2357899999999999999999999 579999999999999999999999999998653221
Q ss_pred ----ccccccccccchhhccccCC--CCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhh
Q 006903 502 ----QSFLAQTSSLKINDISNQMC--STIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAE 575 (626)
Q Consensus 502 ----~~~~~~~~~~~~pe~~~~~~--~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 575 (626)
.....++..|++||...... .+.++||||||+++|||+||+.||... +..+....+......
T Consensus 164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-~~~~~~~~i~~~~~~----------- 231 (305)
T 2wtk_C 164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD-NIYKLFENIGKGSYA----------- 231 (305)
T ss_dssp SSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCS-SHHHHHHHHHHCCCC-----------
T ss_pred cccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHhcCCCC-----------
Confidence 12345788899999876543 367999999999999999999999753 333333333322211
Q ss_pred hccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 576 AASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 576 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
.+......+.+++.+||+.||++|||++|+++.
T Consensus 232 -~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 232 -IPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp -CCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -CCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 011123357789999999999999999999863
No 230
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=3.4e-37 Score=326.08 Aligned_cols=252 Identities=16% Similarity=0.238 Sum_probs=194.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHhccCC-----------CCCccccceEEEeCC----
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK-----------HPNVLPPLAYYCSKQ---- 414 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~-----------H~nIv~l~g~~~~~~---- 414 (626)
.+.||+|+||.||+|.. .+++.||||++.......+.+.+|++++++++ ||||+++++++...+
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 103 (373)
T 1q8y_A 24 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGV 103 (373)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEE
T ss_pred EEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCc
Confidence 47899999999999995 67899999999865445567889999988876 899999999988654
Q ss_pred eEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCC-CceeccCCCCCeeeC------CCCCe
Q 006903 415 EKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELRED-GIAHGNLKSNNILFN------NNMEP 487 (626)
Q Consensus 415 ~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~-~ivHrDlkp~NILl~------~~~~~ 487 (626)
..++||||+ +++|.+++.... ...+++..+..++.|++.||+||| ++ +|+||||||+|||++ ..+.+
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH----~~~~ivH~Dikp~NIll~~~~~~~~~~~~ 177 (373)
T 1q8y_A 104 HVVMVFEVL-GENLLALIKKYE-HRGIPLIYVKQISKQLLLGLDYMH----RRCGIIHTDIKPENVLMEIVDSPENLIQI 177 (373)
T ss_dssp EEEEEECCC-CEEHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHH----HTTCEECSCCSGGGEEEEEEETTTTEEEE
T ss_pred eEEEEEecC-CCCHHHHHHHhh-ccCCcHHHHHHHHHHHHHHHHHHH----hcCCEEecCCChHHeEEeccCCCcCcceE
Confidence 689999999 889999997532 345899999999999999999999 55 999999999999994 44579
Q ss_pred EEeeccCccccCCCccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcc-----hhHHHHHHhhc-
Q 006903 488 CISEYGLIVTENHDQSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFN-----LATWVHSVVRE- 561 (626)
Q Consensus 488 kl~DFGl~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~-----~~~~~~~~~~~- 561 (626)
||+|||++...........++..|++||......++.++|||||||++|||+||+.||..... ....+..+...
T Consensus 178 kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 257 (373)
T 1q8y_A 178 KIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELL 257 (373)
T ss_dssp EECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHH
T ss_pred EEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhc
Confidence 999999997665555556788899999999888889999999999999999999999974321 01111111100
Q ss_pred -cccc----------cc-----------------ccHHHH-hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 562 -EWTV----------EV-----------------FDEVLI-AEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 562 -~~~~----------~~-----------------~d~~~~-~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.... .. ...... ....+......+.+++.+||+.||++|||++|+++
T Consensus 258 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 258 GELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 333 (373)
T ss_dssp CSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred CCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence 0000 00 000000 01133556678999999999999999999999987
No 231
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=5.4e-37 Score=317.08 Aligned_cols=248 Identities=18% Similarity=0.188 Sum_probs=183.1
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCCccccceEEE--------------eCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPNVLPPLAYYC--------------SKQ 414 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~nIv~l~g~~~--------------~~~ 414 (626)
.+.||+|+||.||+|... +++.||||++.... ...+.+.+|++++++++||||+++++++. ..+
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~ 95 (320)
T 2i6l_A 16 LKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELN 95 (320)
T ss_dssp EEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCS
T ss_pred EEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccC
Confidence 478999999999999965 58999999987544 23467889999999999999999999873 346
Q ss_pred eEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeC-CCCCeEEeecc
Q 006903 415 EKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFN-NNMEPCISEYG 493 (626)
Q Consensus 415 ~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFG 493 (626)
..++||||++ |+|.+++.. ..+++..+..++.|++.||+||| +.+|+||||||+|||++ +++.+||+|||
T Consensus 96 ~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg 166 (320)
T 2i6l_A 96 SVYIVQEYME-TDLANVLEQ----GPLLEEHARLFMYQLLRGLKYIH----SANVLHRDLKPANLFINTEDLVLKIGDFG 166 (320)
T ss_dssp EEEEEEECCS-EEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHH----HTTCBCCCCSGGGEEEETTTTEEEECCCT
T ss_pred ceeEEeeccC-CCHHHHhhc----CCccHHHHHHHHHHHHHHHHHHH----hCCEecCCCCHHHEEEcCCCCeEEEccCc
Confidence 7899999998 699999953 46899999999999999999999 57999999999999997 56789999999
Q ss_pred CccccCC------Cccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccc
Q 006903 494 LIVTENH------DQSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVE 566 (626)
Q Consensus 494 l~~~~~~------~~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 566 (626)
+++.... ......++..|++||.... ..++.++|||||||++|||+||+.||...... +....+........
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~ 245 (320)
T 2i6l_A 167 LARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL-EQMQLILESIPVVH 245 (320)
T ss_dssp TCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHSCCCC
T ss_pred cccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCc
Confidence 9875322 1122345778999997654 56789999999999999999999999755432 22222221110000
Q ss_pred c---------c----cHHHHh-----hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 567 V---------F----DEVLIA-----EAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 567 ~---------~----d~~~~~-----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
. . ...... ..........+.+++.+||+.||++|||++|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 246 EEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 0 0 000000 0001112346889999999999999999999987
No 232
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=8e-37 Score=313.00 Aligned_cols=242 Identities=18% Similarity=0.261 Sum_probs=193.4
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC----------CHHHHHHHHHHhccCC-CCCccccceEEEeCCeEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI----------SSEDFKNRMQKIDHVK-HPNVLPPLAYYCSKQEKLL 418 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~----------~~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~~~~~l 418 (626)
.+.||+|+||.||+|.. .+|+.||||+++.... ..+.+.+|+++++++. ||||+++++++...+..++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~l 101 (298)
T 1phk_A 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFL 101 (298)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred eeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEE
Confidence 47899999999999996 4689999999875431 1245789999999996 9999999999999999999
Q ss_pred EEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcccc
Q 006903 419 VYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTE 498 (626)
Q Consensus 419 v~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~ 498 (626)
||||+++|+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 102 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 174 (298)
T 1phk_A 102 VFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICALH----KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL 174 (298)
T ss_dssp EEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEeccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCcceEEEcCCCcEEEecccchhhc
Confidence 9999999999999963 346899999999999999999999 579999999999999999999999999998654
Q ss_pred CCC--ccccccccccchhhccc------cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccH
Q 006903 499 NHD--QSFLAQTSSLKINDISN------QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDE 570 (626)
Q Consensus 499 ~~~--~~~~~~~~~~~~pe~~~------~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~ 570 (626)
... .....++..|++||... ...++.++||||||+++|||++|+.||.... .......+......... +
T Consensus 175 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~--~ 251 (298)
T 1phk_A 175 DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK-QMLMLRMIMSGNYQFGS--P 251 (298)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHTCCCCCT--T
T ss_pred CCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc-HHHHHHHHhcCCcccCc--c
Confidence 322 23345778899999864 3456889999999999999999999987543 22333333322211110 0
Q ss_pred HHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 571 VLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 571 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
........+.+++.+||+.||++|||+.|+++
T Consensus 252 ------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 252 ------EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp ------TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred ------cccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 00112345888999999999999999999976
No 233
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=7.3e-37 Score=323.03 Aligned_cols=248 Identities=16% Similarity=0.223 Sum_probs=189.6
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeC-----CeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSK-----QEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~-----~~~~lv~Ey 422 (626)
.+.||+|+||.||+|.. .+++.||||++..... ..+.+.+|++++++++||||+++++++... ...++||||
T Consensus 32 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~ 111 (364)
T 3qyz_A 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 111 (364)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEEC
T ss_pred EEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcc
Confidence 47899999999999984 4788999999975432 235788999999999999999999998765 368999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC-
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD- 501 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~- 501 (626)
+. |+|.+++.. ..+++..+..++.|++.||.||| +.||+||||||+|||++.++.+||+|||++......
T Consensus 112 ~~-~~L~~~l~~----~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 182 (364)
T 3qyz_A 112 ME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182 (364)
T ss_dssp CS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred cC-cCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCC
Confidence 97 599999863 35899999999999999999999 579999999999999999999999999998654322
Q ss_pred -----ccccccccccchhhccc-cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhh---ccccc---cccc
Q 006903 502 -----QSFLAQTSSLKINDISN-QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVR---EEWTV---EVFD 569 (626)
Q Consensus 502 -----~~~~~~~~~~~~pe~~~-~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~---~~~~~---~~~d 569 (626)
.....++..|++||... ...++.++|||||||++|||+||+.||........ ...+.. ..... ...+
T Consensus 183 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~ 261 (364)
T 3qyz_A 183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGILGSPSQEDLNCIIN 261 (364)
T ss_dssp CBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGH-HHHHHHHHCSCCHHHHHTCCC
T ss_pred CccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHH-HHHHHHHhCCCCHHHHHHhhh
Confidence 12346788899999754 44579999999999999999999999975433222 222111 00000 0000
Q ss_pred HH---H----------HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 570 EV---L----------IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 570 ~~---~----------~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.. . ............+.+++.+||+.||++|||+.|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 262 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00 0 000000112345889999999999999999999987
No 234
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=2e-36 Score=308.60 Aligned_cols=241 Identities=19% Similarity=0.242 Sum_probs=193.4
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCC---CCHHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS---ISSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|... +++.||||++.... ...+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 106 (287)
T 2wei_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106 (287)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCC
Confidence 478999999999999964 78999999986543 34578999999999999999999999999999999999999999
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC---CCeEEeeccCccccCCCc-
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN---MEPCISEYGLIVTENHDQ- 502 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGl~~~~~~~~- 502 (626)
+|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+||+++.+ +.+||+|||++.......
T Consensus 107 ~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH----~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~ 179 (287)
T 2wei_A 107 ELFDEIIK---RKRFSEHDAARIIKQVFSGITYMH----KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179 (287)
T ss_dssp BHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHH----HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSS
T ss_pred CHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCc
Confidence 99998853 246899999999999999999999 5799999999999999754 469999999986543322
Q ss_pred -cccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 503 -SFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 503 -~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
....++..|++||..... ++.++||||||+++|||++|+.||... +..+....+.......... .....
T Consensus 180 ~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~--------~~~~~ 249 (287)
T 2wei_A 180 MKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGK-NEYDILKRVETGKYAFDLP--------QWRTI 249 (287)
T ss_dssp CSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCCCSG--------GGTTS
T ss_pred cccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCC-CHHHHHHHHHcCCCCCCch--------hhhhc
Confidence 233467789999987654 789999999999999999999998753 3333333333322111110 00112
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
...+.+++.+||+.||++|||+.|+++
T Consensus 250 ~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 250 SDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 235788999999999999999999987
No 235
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.1e-36 Score=314.54 Aligned_cols=240 Identities=19% Similarity=0.262 Sum_probs=189.4
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCC---HHHHHHHHHHhccCC--CCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSIS---SEDFKNRMQKIDHVK--HPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~---~~~~~~ei~~l~~l~--H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||++...+++.||||++...... .+.+.+|++++++++ ||||+++++++...+..++||| +.+
T Consensus 33 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~ 111 (313)
T 3cek_A 33 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 111 (313)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCS
T ss_pred EEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCC
Confidence 4789999999999999888999999999755433 356889999999997 5999999999999999999999 568
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCc---
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQ--- 502 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~--- 502 (626)
++|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||+++ +.+||+|||++.......
T Consensus 112 ~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~ 183 (313)
T 3cek_A 112 IDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIH----QHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSV 183 (313)
T ss_dssp EEHHHHHHH---CSSCCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEEET-TEEEECCCSSSCC--------
T ss_pred CcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCceecCCCcccEEEEC-CeEEEeeccccccccCccccc
Confidence 899999964 246899999999999999999999 579999999999999975 789999999986543221
Q ss_pred --cccccccccchhhcccc-----------CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccccccccc
Q 006903 503 --SFLAQTSSLKINDISNQ-----------MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFD 569 (626)
Q Consensus 503 --~~~~~~~~~~~pe~~~~-----------~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d 569 (626)
....++..|++||.... ..++.++|||||||++|||+||+.||.......................
T Consensus 184 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~- 262 (313)
T 3cek_A 184 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP- 262 (313)
T ss_dssp ------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCC-
T ss_pred cccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCc-
Confidence 23357888999998754 3578899999999999999999999976544433333333222111110
Q ss_pred HHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 006903 570 EVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAVM 609 (626)
Q Consensus 570 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~~ 609 (626)
......+.+++.+||+.||++|||+.|+++.
T Consensus 263 ---------~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 263 ---------DIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp ---------CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ---------ccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 0112357888999999999999999999874
No 236
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=7.2e-37 Score=319.49 Aligned_cols=243 Identities=18% Similarity=0.247 Sum_probs=166.7
Q ss_pred cccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCccccceEEEe----CCeEEEEEeecC
Q 006903 350 PAELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVLPPLAYYCS----KQEKLLVYEYQP 424 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv~l~g~~~~----~~~~~lv~Ey~~ 424 (626)
..++||+|+||.||+|... +|+.||||++... .....+....++.++||||+++++++.. ....++||||++
T Consensus 33 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 109 (336)
T 3fhr_A 33 SKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS---PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECME 109 (336)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEESS---HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCT
T ss_pred cceeeeeCCCeEEEEEEECCCCCEEEEEEecCc---HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccC
Confidence 3568999999999999955 6999999998653 2222233334567799999999999876 445899999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC---CCCeEEeeccCccccCCC
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN---NMEPCISEYGLIVTENHD 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGl~~~~~~~ 501 (626)
+|+|.+++... ....+++..+..++.|++.||.||| +.+|+||||||+|||++. ++.+||+|||++......
T Consensus 110 gg~L~~~l~~~-~~~~l~~~~~~~i~~ql~~~l~~LH----~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~ 184 (336)
T 3fhr_A 110 GGELFSRIQER-GDQAFTEREAAEIMRDIGTAIQFLH----SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN 184 (336)
T ss_dssp TEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHH----HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC---
T ss_pred CCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEEecCCCceEEEeccccceecccc
Confidence 99999999753 2357999999999999999999999 579999999999999986 455999999998754332
Q ss_pred -ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhH---HHHHHhhcccccccccHHHHhhhc
Q 006903 502 -QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLAT---WVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 502 -~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~---~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
.....++..|++||......++.++|||||||++|||+||+.||........ ........... ... ..
T Consensus 185 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~------~~ 256 (336)
T 3fhr_A 185 ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYG--FPN------PE 256 (336)
T ss_dssp -------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------C--CCT------TT
T ss_pred ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccc--cCc------hh
Confidence 2334568889999998777788899999999999999999999864322110 00000000000 000 00
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 578 SEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.......+.+++.+||+.||++|||+.|+++
T Consensus 257 ~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 257 WSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp STTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0122345888999999999999999999988
No 237
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.1e-36 Score=329.31 Aligned_cols=243 Identities=19% Similarity=0.245 Sum_probs=181.7
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
.++||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +|||||++++++.+.+..++||||+. |+|.
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~--~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~ 96 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQ 96 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGG--GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHH--HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHH
Confidence 4789999999998777778999999998653 245678999999876 89999999999999999999999995 6999
Q ss_pred HhhcCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCC-------------CCeEEeec
Q 006903 430 NLLHGSENGQ----SFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNN-------------MEPCISEY 492 (626)
Q Consensus 430 ~~l~~~~~~~----~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~-------------~~~kl~DF 492 (626)
+++....... ..++..++.++.||+.||+||| +.+|+||||||+|||++.+ +.+||+||
T Consensus 97 ~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DF 172 (434)
T 2rio_A 97 DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH----SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172 (434)
T ss_dssp HHHHTC------------CCHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCC
T ss_pred HHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH----HCCccccCCChHhEEEecCcccccccccCCCceEEEEccc
Confidence 9997532211 1133346789999999999999 5799999999999999754 48999999
Q ss_pred cCccccCCCc-------cccccccccchhhcccc-------CCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHH
Q 006903 493 GLIVTENHDQ-------SFLAQTSSLKINDISNQ-------MCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHS 557 (626)
Q Consensus 493 Gl~~~~~~~~-------~~~~~~~~~~~pe~~~~-------~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~ 557 (626)
|+++...... ....++..|+|||+... ..++.++|||||||++|||+| |+.||........ .
T Consensus 173 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~---~ 249 (434)
T 2rio_A 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES---N 249 (434)
T ss_dssp TTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH---H
T ss_pred ccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH---H
Confidence 9987543321 23467889999998754 567899999999999999999 8999865432221 1
Q ss_pred HhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 558 VVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 558 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
+.......... ...........+.+++.+||+.||++|||+.|+++
T Consensus 250 i~~~~~~~~~~-----~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 250 IIRGIFSLDEM-----KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHHTCCCCCCC-----TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HhcCCCCcccc-----cccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 11111111100 00112344567889999999999999999999975
No 238
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.3e-36 Score=315.58 Aligned_cols=251 Identities=17% Similarity=0.247 Sum_probs=190.6
Q ss_pred ccccccCCCcceEEEEe--CCCcEEEEEEcCCCCC---CHHHHHHHHHHhccC---CCCCccccceEEE-----eCCeEE
Q 006903 351 AELLGRGKHGSLYRVVL--DDGLMLAVKRLRDWSI---SSEDFKNRMQKIDHV---KHPNVLPPLAYYC-----SKQEKL 417 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~--~~g~~vAvK~l~~~~~---~~~~~~~ei~~l~~l---~H~nIv~l~g~~~-----~~~~~~ 417 (626)
.+.||+|+||.||+|.. .+|+.||+|+++.... ....+.+|+++++.+ +||||+++++++. .....+
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~ 95 (326)
T 1blx_A 16 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 95 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEE
T ss_pred eeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEE
Confidence 47899999999999996 4688999999864332 234567787777665 8999999999987 456789
Q ss_pred EEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccc
Q 006903 418 LVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVT 497 (626)
Q Consensus 418 lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~ 497 (626)
+||||++ |+|.+++.... ...+++..+..++.|++.||.||| +.||+||||||+||+++.++.+||+|||++..
T Consensus 96 lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH----~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 169 (326)
T 1blx_A 96 LVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLH----SHRVVHRDLKPQNILVTSSGQIKLADFGLARI 169 (326)
T ss_dssp EEEECCS-CBHHHHHHHSC-TTCSCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCCGGGEEECTTCCEEECSCCSCCC
T ss_pred EEEecCC-CCHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHH----HCCceeccCCHHHeEEcCCCCEEEecCccccc
Confidence 9999998 69999997432 345899999999999999999999 57999999999999999999999999999865
Q ss_pred cCCC--ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhc-------ccccccc
Q 006903 498 ENHD--QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVRE-------EWTVEVF 568 (626)
Q Consensus 498 ~~~~--~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~-------~~~~~~~ 568 (626)
.... .....++..|++||......++.++|||||||++|||+||+.||........ ...+... .+.....
T Consensus 170 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~ 248 (326)
T 1blx_A 170 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ-LGKILDVIGLPGEEDWPRDVA 248 (326)
T ss_dssp CCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCGGGSCTTCS
T ss_pred ccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHHHcCCCCcccCccccc
Confidence 4322 2234568889999998888889999999999999999999999975543322 2222110 1100000
Q ss_pred cHH--H------HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 569 DEV--L------IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 569 d~~--~------~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.+. . ............+.+++.+||+.||++|||+.|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 249 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp SCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000 0 000011122345788999999999999999999985
No 239
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-36 Score=327.10 Aligned_cols=241 Identities=18% Similarity=0.254 Sum_probs=180.5
Q ss_pred ccccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEEEEeecCCCC
Q 006903 349 APAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 349 ~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
...++||+|+||+||.....+++.||||++.... .+.+.+|+++++++ +|||||++++++.+.+..++||||+. |+
T Consensus 27 ~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~ 103 (432)
T 3p23_A 27 CPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC--FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-AT 103 (432)
T ss_dssp EEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT--EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EE
T ss_pred ecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CC
Confidence 3457899999999776556679999999996533 23467899999998 79999999999999999999999996 69
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC-----CCCeEEeeccCccccCCC-
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN-----NMEPCISEYGLIVTENHD- 501 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~-----~~~~kl~DFGl~~~~~~~- 501 (626)
|.+++.... ..+.+..+..++.|++.||.||| +.+|+||||||+|||++. ...+||+|||+++.....
T Consensus 104 L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~ 177 (432)
T 3p23_A 104 LQEYVEQKD--FAHLGLEPITLLQQTTSGLAHLH----SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR 177 (432)
T ss_dssp HHHHHHSSS--CCCCSSCHHHHHHHHHHHHHHHH----HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC----
T ss_pred HHHHHHhcC--CCccchhHHHHHHHHHHHHHHHH----HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCC
Confidence 999997432 33455567789999999999999 579999999999999953 346789999998754321
Q ss_pred -----ccccccccccchhhccc---cCCCCCcchhHHHHHHHHHHHc-CCCCCCCCcchhHHHHHHhhcccccccccHHH
Q 006903 502 -----QSFLAQTSSLKINDISN---QMCSTIKADVYGFGVILLELLT-GKLVQNNGFNLATWVHSVVREEWTVEVFDEVL 572 (626)
Q Consensus 502 -----~~~~~~~~~~~~pe~~~---~~~~~~k~DVwSfGvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 572 (626)
.....++..|++||... ...++.++|||||||++|||+| |+.||...... ........ .......+
T Consensus 178 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~--~~~~~~~~-~~~~~~~~-- 252 (432)
T 3p23_A 178 HSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR--QANILLGA-CSLDCLHP-- 252 (432)
T ss_dssp --------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH--HHHHHTTC-CCCTTSCT--
T ss_pred cceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH--HHHHHhcc-CCccccCc--
Confidence 22345789999999886 3456789999999999999999 88888543221 11111111 11111110
Q ss_pred HhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 573 IAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 573 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.......+.+++.+||+.||++|||+.||++
T Consensus 253 -----~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 253 -----EKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp -----TCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -----cccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 1122334778999999999999999999984
No 240
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=4.1e-37 Score=319.86 Aligned_cols=246 Identities=17% Similarity=0.245 Sum_probs=171.3
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC--CHHHHHHHHH-HhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI--SSEDFKNRMQ-KIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~ei~-~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|.. .+|+.||||+++.... ...++..|+. +++.++||||+++++++...+..++||||+++
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~- 105 (327)
T 3aln_A 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST- 105 (327)
T ss_dssp -CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-
T ss_pred hheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-
Confidence 47899999999999996 4799999999976432 2235566666 77888999999999999999999999999985
Q ss_pred ChhHhhcC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCC-CceeccCCCCCeeeCCCCCeEEeeccCccccCCC--
Q 006903 427 SLFNLLHG--SENGQSFDWGSRLRVAACVAKALALIHEELRED-GIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD-- 501 (626)
Q Consensus 427 ~L~~~l~~--~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~-~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~-- 501 (626)
+|.+++.. ......+++..+..++.+++.||.|||+ . +|+||||||+|||++.++.+||+|||+++.....
T Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~----~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 181 (327)
T 3aln_A 106 SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE----NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIA 181 (327)
T ss_dssp EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH----HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC------
T ss_pred ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc----cCCEeECCCCHHHEEEcCCCCEEEccCCCceecccccc
Confidence 88777742 1123578999999999999999999994 5 8999999999999999999999999998654322
Q ss_pred ccccccccccchhhcc----ccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhc
Q 006903 502 QSFLAQTSSLKINDIS----NQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAA 577 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~----~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 577 (626)
.....++..|++||.. ....++.++|||||||++|||+||+.||.......+.......... ... . ...
T Consensus 182 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~~-~-----~~~ 254 (327)
T 3aln_A 182 KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDP-PQL-S-----NSE 254 (327)
T ss_dssp ------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCC-CCC-C-----CCS
T ss_pred cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCC-CCC-C-----Ccc
Confidence 2233578889999987 4556789999999999999999999999753322221111111100 000 0 000
Q ss_pred cHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 578 SEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 578 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.......+.+++.+||+.||++|||+.|+++
T Consensus 255 ~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 255 EREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp SCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 0112335888999999999999999999976
No 241
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.5e-36 Score=317.12 Aligned_cols=253 Identities=16% Similarity=0.195 Sum_probs=190.6
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeC-----CeEEEEEee
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSK-----QEKLLVYEY 422 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~-----~~~~lv~Ey 422 (626)
.+.||+|+||.||+|... +|+.||||++..... ....+.+|++++++++||||+++++++... ...++||||
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~ 95 (353)
T 2b9h_A 16 KSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQEL 95 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECC
T ss_pred eeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEec
Confidence 478999999999999954 689999999975432 235678999999999999999999987654 678999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC-
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD- 501 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~- 501 (626)
+. |+|.+++.. ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||++......
T Consensus 96 ~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH----~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 166 (353)
T 2b9h_A 96 MQ-TDLHRVIST----QMLSDDHIQYFIYQTLRAVKVLH----GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166 (353)
T ss_dssp CS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHH----HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred cC-ccHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeEEcCCCcEEEEeccccccccccc
Confidence 97 699999863 35899999999999999999999 579999999999999999999999999998653221
Q ss_pred ------------ccccccccccchhhcccc-CCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhh---ccc--
Q 006903 502 ------------QSFLAQTSSLKINDISNQ-MCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVR---EEW-- 563 (626)
Q Consensus 502 ------------~~~~~~~~~~~~pe~~~~-~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~---~~~-- 563 (626)
.....++..|++||.... ..++.++|||||||++|||++|+.||........ ...+.. ...
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~ 245 (353)
T 2b9h_A 167 ADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ-LLLIFGIIGTPHSD 245 (353)
T ss_dssp -------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCST
T ss_pred ccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCCchh
Confidence 112356888999997643 6678999999999999999999999975432221 111111 000
Q ss_pred --ccccccHHHH-------------hhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhh
Q 006903 564 --TVEVFDEVLI-------------AEAASEERMLKLLQVALRCINQSPNERPSMNQVAV--MINNI 613 (626)
Q Consensus 564 --~~~~~d~~~~-------------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~--~L~~i 613 (626)
.......... .....+.....+.+++.+||+.||++|||++|+++ .++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 312 (353)
T 2b9h_A 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTY 312 (353)
T ss_dssp TTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred ccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCcccccc
Confidence 0000000000 00001122345789999999999999999999987 34444
No 242
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.2e-36 Score=310.48 Aligned_cols=227 Identities=13% Similarity=0.121 Sum_probs=177.1
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCCH----HHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSISS----EDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPN 425 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~----~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~ 425 (626)
.+.||+|+||.||+|... +++.||||.+....... +.+.+|++.+.+++||||+++++++...+..|+||||+++
T Consensus 36 ~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 115 (286)
T 3uqc_A 36 LIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRG 115 (286)
T ss_dssp EEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCE
T ss_pred EEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCC
Confidence 478999999999999964 58999999998765332 6789999999999999999999999999999999999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCcccc
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFL 505 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~ 505 (626)
++|.+++.. + ....+..+++.|++.||.||| +.||+||||||+|||++.++.+||+++|..
T Consensus 116 ~~L~~~l~~---~--~~~~~~~~i~~ql~~aL~~lH----~~givH~Dikp~NIll~~~g~~kl~~~~~~---------- 176 (286)
T 3uqc_A 116 GSLQEVADT---S--PSPVGAIRAMQSLAAAADAAH----RAGVALSIDHPSRVRVSIDGDVVLAYPATM---------- 176 (286)
T ss_dssp EEHHHHHTT---C--CCHHHHHHHHHHHHHHHHHHH----HTTCCCCCCSGGGEEEETTSCEEECSCCCC----------
T ss_pred CCHHHHHhc---C--CChHHHHHHHHHHHHHHHHHH----HCCCccCCCCcccEEEcCCCCEEEEecccc----------
Confidence 999999952 1 355578899999999999999 579999999999999999999999866532
Q ss_pred ccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHH
Q 006903 506 AQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKL 585 (626)
Q Consensus 506 ~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l 585 (626)
+ .++.++|||||||++|||+||+.||............ ............. ........+
T Consensus 177 -------~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~l 236 (286)
T 3uqc_A 177 -------P-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA--ERDTAGQPIEPAD----IDRDIPFQI 236 (286)
T ss_dssp -------T-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC--CBCTTSCBCCHHH----HCTTSCHHH
T ss_pred -------C-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH--HHHhccCCCChhh----cccCCCHHH
Confidence 1 2578999999999999999999999754321100000 0000000011111 111223458
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHhhhhcc
Q 006903 586 LQVALRCINQSPNERPSMNQVAVMINNIKEEE 617 (626)
Q Consensus 586 ~~l~~~Cl~~dP~~RPs~~ev~~~L~~i~~~~ 617 (626)
.+++.+||+.||++| |+.|+++.|+++....
T Consensus 237 ~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 237 SAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp HHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred HHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 899999999999999 9999999999987553
No 243
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=4e-36 Score=310.61 Aligned_cols=243 Identities=17% Similarity=0.237 Sum_probs=175.0
Q ss_pred ccccccCCCcceEEEEeC-CCcEEEEEEcCCCCCCH---HHHHHHHHHhccCCCCCccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWSISS---EDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~---~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.||+|+||.||+|... +|+.||||++....... +.+.++..+++.++||||+++++++...+..++||||+ ++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~ 108 (318)
T 2dyl_A 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GT 108 (318)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SE
T ss_pred cceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CC
Confidence 478999999999999964 79999999997654322 22344555688889999999999999999999999999 44
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC--ccc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD--QSF 504 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~--~~~ 504 (626)
.+..+... ....+++..+..++.+++.||.|||+. .+|+||||||+||+++.++.+||+|||++...... ...
T Consensus 109 ~~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 183 (318)
T 2dyl_A 109 CAEKLKKR--MQGPIPERILGKMTVAIVKALYYLKEK---HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDR 183 (318)
T ss_dssp EHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHH---HCCCCCCCCGGGEEECTTSCEEECCCTTC-----------
T ss_pred cHHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhh---CCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCccccc
Confidence 55555532 234689999999999999999999941 38999999999999999999999999998653222 223
Q ss_pred cccccccchhhccc-----cCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccH
Q 006903 505 LAQTSSLKINDISN-----QMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASE 579 (626)
Q Consensus 505 ~~~~~~~~~pe~~~-----~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 579 (626)
..++..|++||... ...++.++|||||||++|||+||+.||.......+............... ..
T Consensus 184 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---------~~ 254 (318)
T 2dyl_A 184 SAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPG---------HM 254 (318)
T ss_dssp ---CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCS---------SS
T ss_pred cCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCc---------cC
Confidence 45788899999873 45678899999999999999999999986544444444443332111000 00
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 580 ERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 580 ~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.....+.+++.+||+.||++|||++|+++
T Consensus 255 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 255 GFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp CCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 11234788999999999999999999976
No 244
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=7.6e-37 Score=317.03 Aligned_cols=232 Identities=19% Similarity=0.297 Sum_probs=188.4
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCCC-------CHHHHHHHHHHhccCC--CCCccccceEEEeCCeEEEEE
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI-------SSEDFKNRMQKIDHVK--HPNVLPPLAYYCSKQEKLLVY 420 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~-------~~~~~~~ei~~l~~l~--H~nIv~l~g~~~~~~~~~lv~ 420 (626)
.+.||+|+||.||+|. ..+++.||||+++.... ..+.+.+|+.++++++ ||||+++++++...+..++||
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~ 127 (320)
T 3a99_A 48 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLIL 127 (320)
T ss_dssp EEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEE
Confidence 4789999999999998 45789999999875432 2245778999999996 599999999999999999999
Q ss_pred eecCC-CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeC-CCCCeEEeeccCcccc
Q 006903 421 EYQPN-GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFN-NNMEPCISEYGLIVTE 498 (626)
Q Consensus 421 Ey~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFGl~~~~ 498 (626)
||+.+ ++|.+++.. ...+++..+..++.|++.||.||| +.+|+||||||+|||++ +++.+||+|||++...
T Consensus 128 e~~~~~~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH----~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~ 200 (320)
T 3a99_A 128 ERPEPVQDLFDFITE---RGALQEELARSFFWQVLEAVRHCH----NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 200 (320)
T ss_dssp ECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EcCCCCccHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH----HCCcEeCCCCHHHEEEeCCCCCEEEeeCcccccc
Confidence 99986 899999964 346899999999999999999999 57999999999999999 7889999999998754
Q ss_pred CCC-ccccccccccchhhccccCCC-CCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhh
Q 006903 499 NHD-QSFLAQTSSLKINDISNQMCS-TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEA 576 (626)
Q Consensus 499 ~~~-~~~~~~~~~~~~pe~~~~~~~-~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 576 (626)
... .....++..|++||......+ +.++|||||||++|||+||+.||..... ....... .
T Consensus 201 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-------~~~~~~~---~-------- 262 (320)
T 3a99_A 201 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-------IIRGQVF---F-------- 262 (320)
T ss_dssp CSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-------HHHCCCC---C--------
T ss_pred ccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-------hhccccc---c--------
Confidence 332 233457888999998765554 6789999999999999999999864211 1111100 0
Q ss_pred ccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 577 ASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 577 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
.......+.+++.+||+.||++|||++|+++
T Consensus 263 -~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 263 -RQRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp -SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -cccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0111234788999999999999999999987
No 245
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1e-35 Score=305.35 Aligned_cols=225 Identities=18% Similarity=0.295 Sum_probs=172.8
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCCHHHHHHHHHHh-ccCCCCCccccceEEEe----CCeEEEEEeecC
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSISSEDFKNRMQKI-DHVKHPNVLPPLAYYCS----KQEKLLVYEYQP 424 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~ei~~l-~~l~H~nIv~l~g~~~~----~~~~~lv~Ey~~ 424 (626)
.++||+|+||.||+|.. .+++.||+|+++. ...+.+|++++ +..+||||+++++++.. ....++||||++
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 98 (299)
T 3m2w_A 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 98 (299)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCC
T ss_pred CcccccCCCeEEEEEEEcCCCcEEEEEEecc----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecC
Confidence 36799999999999985 5789999999864 35678888887 66799999999999887 677899999999
Q ss_pred CCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCC---CCCeEEeeccCccccCCC
Q 006903 425 NGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNN---NMEPCISEYGLIVTENHD 501 (626)
Q Consensus 425 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGl~~~~~~~ 501 (626)
+|+|.+++... ....+++..+..++.|++.||.||| +.+|+||||||+|||++. ++.+||+|||++.....
T Consensus 99 ~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~- 172 (299)
T 3m2w_A 99 GGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLH----SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTG- 172 (299)
T ss_dssp SCBHHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTT-
T ss_pred CCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEEEecCCCCCcEEEecccccccccc-
Confidence 99999999753 2346999999999999999999999 579999999999999998 78899999999864321
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
..++.++|||||||++|||+||+.||........ .... ............. ......
T Consensus 173 ------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-~~~~-~~~~~~~~~~~~~---~~~~~~ 229 (299)
T 3m2w_A 173 ------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-SPGM-KTRIRMGQYEFPN---PEWSEV 229 (299)
T ss_dssp ------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC--------CCS-CCSSCTTCCSSCH---HHHTTS
T ss_pred ------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh-hHHH-HHHHhhccccCCc---hhcccC
Confidence 2346799999999999999999999964322110 0000 0000000000000 000112
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 582 MLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
...+.+++.+||+.||++|||+.|+++
T Consensus 230 ~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 230 SEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 345888999999999999999999987
No 246
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.9e-36 Score=338.01 Aligned_cols=261 Identities=23% Similarity=0.255 Sum_probs=198.2
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEe------CCeEEEEEe
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCS------KQEKLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~------~~~~~lv~E 421 (626)
.+.||+|+||.||+|.. .+|+.||||+++.... ..+.+.+|++++++++||||+++++++.. .+..++|||
T Consensus 19 ~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmE 98 (676)
T 3qa8_A 19 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAME 98 (676)
T ss_dssp CCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEE
Confidence 47899999999999985 5689999999876432 23568899999999999999999998755 667899999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCC---eEEeeccCcccc
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNME---PCISEYGLIVTE 498 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGl~~~~ 498 (626)
|+++|+|.+++........+++..+..++.+++.||.||| +.||+||||||+||+++.++. +||+|||++...
T Consensus 99 y~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH----s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~ 174 (676)
T 3qa8_A 99 YCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH----ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL 174 (676)
T ss_dssp CCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH----HTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBT
T ss_pred eCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH----HCCCccCCCCHHHeEeecCCCceeEEEccccccccc
Confidence 9999999999986555557999999999999999999999 579999999999999997665 899999998764
Q ss_pred CCC--ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhccc----cccc-----
Q 006903 499 NHD--QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEW----TVEV----- 567 (626)
Q Consensus 499 ~~~--~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~----~~~~----- 567 (626)
... .....++..|++||......++.++|||||||++|||+||+.||........|......... ..+.
T Consensus 175 ~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~ 254 (676)
T 3qa8_A 175 DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAV 254 (676)
T ss_dssp TSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSC
T ss_pred ccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhcccc
Confidence 332 23346788999999998888999999999999999999999999765444443221111000 0000
Q ss_pred -ccHHHH-hhhccHHHHHHHHHHHhhccCCCCCCCCCHHH-----HHHHHHhhhh
Q 006903 568 -FDEVLI-AEAASEERMLKLLQVALRCINQSPNERPSMNQ-----VAVMINNIKE 615 (626)
Q Consensus 568 -~d~~~~-~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~e-----v~~~L~~i~~ 615 (626)
+..... ...........+.+++.+||+.||++|||+.| ..+.++.+..
T Consensus 255 ~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~ 309 (676)
T 3qa8_A 255 KFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILS 309 (676)
T ss_dssp CCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred ccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence 000000 01122234567889999999999999999988 4555655543
No 247
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.3e-36 Score=312.00 Aligned_cols=232 Identities=19% Similarity=0.326 Sum_probs=182.8
Q ss_pred ccccccCCCcceEEEEe-CCCcEEEEEEcCCCCCC-------HHHHHHHHHHhccC----CCCCccccceEEEeCCeEEE
Q 006903 351 AELLGRGKHGSLYRVVL-DDGLMLAVKRLRDWSIS-------SEDFKNRMQKIDHV----KHPNVLPPLAYYCSKQEKLL 418 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~-------~~~~~~ei~~l~~l----~H~nIv~l~g~~~~~~~~~l 418 (626)
.+.||+|+||.||+|.. .+++.||||++...... ...+.+|++++.++ +||||+++++++...+..++
T Consensus 36 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~ 115 (312)
T 2iwi_A 36 GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFML 115 (312)
T ss_dssp EEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEE
T ss_pred eeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEE
Confidence 57899999999999984 57899999999765421 23456788888888 89999999999999999999
Q ss_pred EEee-cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeC-CCCCeEEeeccCcc
Q 006903 419 VYEY-QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFN-NNMEPCISEYGLIV 496 (626)
Q Consensus 419 v~Ey-~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFGl~~ 496 (626)
|||| +.+++|.+++.. ...+++..++.++.|++.||.||| +.+|+||||||+||+++ .++.+||+|||++.
T Consensus 116 v~e~~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~ 188 (312)
T 2iwi_A 116 VLERPLPAQDLFDYITE---KGPLGEGPSRCFFGQVVAAIQHCH----SRGVVHRDIKDENILIDLRRGCAKLIDFGSGA 188 (312)
T ss_dssp EEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHH----HHTEECCCCSGGGEEEETTTTEEEECCCSSCE
T ss_pred EEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCChhhEEEeCCCCeEEEEEcchhh
Confidence 9999 789999999964 246899999999999999999999 56899999999999999 88999999999987
Q ss_pred ccCCC-ccccccccccchhhccccCCC-CCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHh
Q 006903 497 TENHD-QSFLAQTSSLKINDISNQMCS-TIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIA 574 (626)
Q Consensus 497 ~~~~~-~~~~~~~~~~~~pe~~~~~~~-~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 574 (626)
..... .....++..|++||......+ +.++|||||||++|||++|+.||..... .......
T Consensus 189 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~~---------- 251 (312)
T 2iwi_A 189 LLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE-------ILEAELH---------- 251 (312)
T ss_dssp ECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-------HHHTCCC----------
T ss_pred hcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH-------HhhhccC----------
Confidence 54332 234457888999998765554 4589999999999999999999864211 1111100
Q ss_pred hhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 575 EAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 575 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
........+.+++.+||+.||++|||++|+++
T Consensus 252 --~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 252 --FPAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp --CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred --CcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 01112234788999999999999999999987
No 248
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.7e-35 Score=336.16 Aligned_cols=233 Identities=18% Similarity=0.232 Sum_probs=184.6
Q ss_pred ccccccCCCcceEEEEeC--CCcEEEEEEcCCCCC--CHHHHHHHHHHhccCCCCCccccceEEEeCCe-----EEEEEe
Q 006903 351 AELLGRGKHGSLYRVVLD--DGLMLAVKRLRDWSI--SSEDFKNRMQKIDHVKHPNVLPPLAYYCSKQE-----KLLVYE 421 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~--~g~~vAvK~l~~~~~--~~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~-----~~lv~E 421 (626)
.+.||+|+||.||+|... +|+.||||++..... ..+.+.+|++++++++||||+++++++...+. .|+|||
T Consensus 85 ~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E 164 (681)
T 2pzi_A 85 KGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVME 164 (681)
T ss_dssp EEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEE
Confidence 478999999999999964 689999999875432 23568899999999999999999999987665 799999
Q ss_pred ecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCC
Q 006903 422 YQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHD 501 (626)
Q Consensus 422 y~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~ 501 (626)
|+++++|.+++.. .++|..++.++.||+.||.||| +.|||||||||+|||++.+ .+||+|||+++.....
T Consensus 165 ~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH----~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~ 234 (681)
T 2pzi_A 165 YVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLH----SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF 234 (681)
T ss_dssp CCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHH----HTTEECCCCSGGGEEECSS-CEEECCCTTCEETTCC
T ss_pred eCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHH----HCCCeecccChHHeEEeCC-cEEEEecccchhcccC
Confidence 9999999988742 6899999999999999999999 5799999999999999986 8999999998765443
Q ss_pred ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHH
Q 006903 502 QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEER 581 (626)
Q Consensus 502 ~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 581 (626)
....++..|++||...... +.++|||||||++|||++|..|+..... .... . .. .....
T Consensus 235 -~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~----------~~~~-~-~~-------~~~~~ 293 (681)
T 2pzi_A 235 -GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYV----------DGLP-E-DD-------PVLKT 293 (681)
T ss_dssp -SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEEC----------SSCC-T-TC-------HHHHH
T ss_pred -CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccc----------cccc-c-cc-------ccccc
Confidence 3456788999999876544 8899999999999999999888753110 0000 0 00 01112
Q ss_pred HHHHHHHHhhccCCCCCCCCC-HHHHHHHHHhhh
Q 006903 582 MLKLLQVALRCINQSPNERPS-MNQVAVMINNIK 614 (626)
Q Consensus 582 ~~~l~~l~~~Cl~~dP~~RPs-~~ev~~~L~~i~ 614 (626)
...+.+++.+||+.||++||+ ++++...|..+.
T Consensus 294 ~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 294 YDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred CHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 345788999999999999995 666666666553
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.4e-35 Score=318.38 Aligned_cols=235 Identities=12% Similarity=0.138 Sum_probs=174.5
Q ss_pred ccccccCCCcceEEEE-eCCCcEEEEEEcCCCC----CCHHHHHHHHHHhccCCC-CCccccc---------eE------
Q 006903 351 AELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWS----ISSEDFKNRMQKIDHVKH-PNVLPPL---------AY------ 409 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~----~~~~~~~~ei~~l~~l~H-~nIv~l~---------g~------ 409 (626)
.++||+|+||.||+|. ..+|+.||||+++... ...+.+.+|+.+++.++| +|..... ..
T Consensus 83 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (413)
T 3dzo_A 83 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 162 (413)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC-
T ss_pred ecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCC
Confidence 4789999999999999 5679999999987433 224679999999999987 3221111 11
Q ss_pred ------EEe-----CCeEEEEEeecCCCChhHhhcC----CCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccC
Q 006903 410 ------YCS-----KQEKLLVYEYQPNGSLFNLLHG----SENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNL 474 (626)
Q Consensus 410 ------~~~-----~~~~~lv~Ey~~~g~L~~~l~~----~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDl 474 (626)
+.. ....+++|+++ +++|.+++.. ......+++..++.++.|++.||+||| +++||||||
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~iiHrDi 237 (413)
T 3dzo_A 163 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH----HYGLVHTYL 237 (413)
T ss_dssp --------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH----HTTEECSCC
T ss_pred CccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCc
Confidence 111 12356777765 6899998841 122346889999999999999999999 579999999
Q ss_pred CCCCeeeCCCCCeEEeeccCccccCCCccccccccccchhhcc----------ccCCCCCcchhHHHHHHHHHHHcCCCC
Q 006903 475 KSNNILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDIS----------NQMCSTIKADVYGFGVILLELLTGKLV 544 (626)
Q Consensus 475 kp~NILl~~~~~~kl~DFGl~~~~~~~~~~~~~~~~~~~pe~~----------~~~~~~~k~DVwSfGvvl~elltg~~p 544 (626)
||+|||++.++.+||+|||+++..........+ ..|++||.. ....++.++|||||||++|||+||+.|
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~P 316 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLP 316 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCC
T ss_pred ccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCC
Confidence 999999999999999999998765544444556 889999988 445578899999999999999999999
Q ss_pred CCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 006903 545 QNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERPSMNQVAV 608 (626)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev~~ 608 (626)
|...... +..... +.. .... +..+.+++.+||+.||++||++.|+++
T Consensus 317 f~~~~~~-~~~~~~---------~~~---~~~~----~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 317 NTDDAAL-GGSEWI---------FRS---CKNI----PQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp CCTTGGG-SCSGGG---------GSS---CCCC----CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCcchh-hhHHHH---------Hhh---cccC----CHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 9743211 110000 000 0011 235888999999999999999877754
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=5.5e-34 Score=297.52 Aligned_cols=236 Identities=14% Similarity=0.130 Sum_probs=175.1
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCC---------CHHHHHHHHHHhccCC---------CCCccccceE---
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSI---------SSEDFKNRMQKIDHVK---------HPNVLPPLAY--- 409 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~---------~~~~~~~ei~~l~~l~---------H~nIv~l~g~--- 409 (626)
.+.||+|+||.||+|+. +|+.||||+++.... ..+.+.+|++++++++ |||||++.+.
T Consensus 25 ~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~ 103 (336)
T 2vuw_A 25 CEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCV 103 (336)
T ss_dssp CEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEE
T ss_pred eeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEe
Confidence 47899999999999997 689999999975431 2367889999988875 6666655554
Q ss_pred --------------EEe-------------CCeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 006903 410 --------------YCS-------------KQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHE 462 (626)
Q Consensus 410 --------------~~~-------------~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~ 462 (626)
+.+ .+..++||||+++|++.+.+.. ..+++..+..++.||+.||+|||+
T Consensus 104 ~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~ 179 (336)
T 2vuw_A 104 QGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTASLAVAEA 179 (336)
T ss_dssp ESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 333 6789999999999987776632 458999999999999999999993
Q ss_pred hccCCCceeccCCCCCeeeCCCC--------------------CeEEeeccCccccCCCccccccccccchhhccccCCC
Q 006903 463 ELREDGIAHGNLKSNNILFNNNM--------------------EPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCS 522 (626)
Q Consensus 463 ~~~~~~ivHrDlkp~NILl~~~~--------------------~~kl~DFGl~~~~~~~~~~~~~~~~~~~pe~~~~~~~ 522 (626)
+++|+||||||+|||++.++ .+||+|||+++..... ...+++.|++||+..+..
T Consensus 180 ---~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~--~~~gt~~y~aPE~~~g~~- 253 (336)
T 2vuw_A 180 ---SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG--IVVFCDVSMDEDLFTGDG- 253 (336)
T ss_dssp ---HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT--EEECCCCTTCSGGGCCCS-
T ss_pred ---hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC--cEEEeecccChhhhcCCC-
Confidence 25899999999999999887 8999999999765432 346889999999987665
Q ss_pred CCcchhHHHHHH-HHHHHcCCCCCCCCcchhHHHHHHhhcccccccccHHHHhhhccHHHHHHHHHHHhhccCCCCCCCC
Q 006903 523 TIKADVYGFGVI-LLELLTGKLVQNNGFNLATWVHSVVREEWTVEVFDEVLIAEAASEERMLKLLQVALRCINQSPNERP 601 (626)
Q Consensus 523 ~~k~DVwSfGvv-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP 601 (626)
+.++||||+|++ .+++++|..||.+...................... ....+.....+.+++.+||+.|
T Consensus 254 ~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~s~~~~dli~~~L~~d----- 323 (336)
T 2vuw_A 254 DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCN-----TPAMKQIKRKIQEFHRTMLNFS----- 323 (336)
T ss_dssp SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCC-----SHHHHHHHHHHHHHHHHGGGSS-----
T ss_pred ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccc-----hhhhhhcCHHHHHHHHHHhccC-----
Confidence 889999998777 77888899887421100111111111111100000 0112345567899999999976
Q ss_pred CHHHHH
Q 006903 602 SMNQVA 607 (626)
Q Consensus 602 s~~ev~ 607 (626)
|++|++
T Consensus 324 sa~e~l 329 (336)
T 2vuw_A 324 SATDLL 329 (336)
T ss_dssp SHHHHH
T ss_pred CHHHHH
Confidence 888887
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=2.8e-28 Score=271.22 Aligned_cols=181 Identities=17% Similarity=0.135 Sum_probs=128.0
Q ss_pred cccccCCCcceEEEE-eCCCcEEEEEEcCCCCC-----------CHHHHHHHHHHhccC-CCCCccccceEEEeCCeEEE
Q 006903 352 ELLGRGKHGSLYRVV-LDDGLMLAVKRLRDWSI-----------SSEDFKNRMQKIDHV-KHPNVLPPLAYYCSKQEKLL 418 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~-----------~~~~~~~ei~~l~~l-~H~nIv~l~g~~~~~~~~~l 418 (626)
...+.|++|.+.+++ +..|+.+|+|.+..... ..++|.+|+++|+++ .|+||+++++++.+++..||
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL 319 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL 319 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence 356777777776655 45689999999975421 124699999999999 79999999999999999999
Q ss_pred EEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCcccc
Q 006903 419 VYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTE 498 (626)
Q Consensus 419 v~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~ 498 (626)
||||++||+|.+++.. ..+++.. +|+.||+.||+|+| ++|||||||||+|||+++++.+||+|||+++..
T Consensus 320 VMEyv~G~~L~d~i~~---~~~l~~~---~I~~QIl~AL~ylH----~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~ 389 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAA---GEEIDRE---KILGSLLRSLAALE----KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTT 389 (569)
T ss_dssp EEECCCSEEHHHHHHT---TCCCCHH---HHHHHHHHHHHHHH----HTTCEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred EEecCCCCcHHHHHHh---CCCCCHH---HHHHHHHHHHHHHH----HCCceeccCchHhEEECCCCCEEEeecccCeeC
Confidence 9999999999999964 3456643 58899999999999 689999999999999999999999999998764
Q ss_pred CCC---ccccccccccchhhccccCCCCCcchhHHHHHHHHHHHcCCC
Q 006903 499 NHD---QSFLAQTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKL 543 (626)
Q Consensus 499 ~~~---~~~~~~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~ 543 (626)
... .....+++.|++||+..+. +..++|+||+|++++++.++..
T Consensus 390 ~~~~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~ 436 (569)
T 4azs_A 390 PQDCSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWS 436 (569)
T ss_dssp C---CCSHHHHHHHHHHHHHHC------------------CCCCTTHH
T ss_pred CCCCccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccc
Confidence 432 2335688999999998654 5678999999999888766543
No 252
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.94 E-value=1.1e-26 Score=239.87 Aligned_cols=185 Identities=31% Similarity=0.552 Sum_probs=166.6
Q ss_pred CCHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCcccEEecCCC--CeEEEEEecCCCcee--ccCccccCCCCC
Q 006903 24 VEEEVKRALVQFMEKLSVGNAARDPNWGWNRSSDPCSGKWVGVTCDSRQ--KSVRKIVLDGFNLSG--ILDTTSVCKTQS 99 (626)
Q Consensus 24 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~~~c~~~w~gv~c~~~~--~~v~~l~L~~~~l~g--~~~~~~~~~l~~ 99 (626)
+.++|++||++||+++. ++. .+.+|+.++|||.+.|.||+|+... ++|+.|+|++++++| .+|. .+..+++
T Consensus 3 c~~~~~~aL~~~k~~~~--~~~--~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~-~l~~l~~ 77 (313)
T 1ogq_A 3 CNPQDKQALLQIKKDLG--NPT--TLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPS-SLANLPY 77 (313)
T ss_dssp SCHHHHHHHHHHHHHTT--CCG--GGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCG-GGGGCTT
T ss_pred CCHHHHHHHHHHHHhcC--Ccc--cccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccCh-hHhCCCC
Confidence 45788999999999994 222 4678987789996569999998654 689999999999999 7875 7999999
Q ss_pred ccEEEccc-CCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcC
Q 006903 100 LVVLSLEE-NNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAE 177 (626)
Q Consensus 100 L~~L~ls~-N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~ 177 (626)
|++|+|++ |++.|.+|..|+++++|++|+|++|+++|.+|..+.++++|++|||++|.+++.+|. +..+++|++|+++
T Consensus 78 L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 157 (313)
T 1ogq_A 78 LNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFD 157 (313)
T ss_dssp CSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECC
T ss_pred CCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECc
Confidence 99999995 999999999999999999999999999999999999999999999999999999997 9999999999999
Q ss_pred CCcccccCCCC--CCC-CccEEEccCCcCCCCCCCCCCC
Q 006903 178 NNQLRGGIPEF--DFS-NLLQFNVSNNNLSGPVPGVNGR 213 (626)
Q Consensus 178 ~N~l~g~ip~~--~~~-~L~~l~ls~N~l~g~ip~~~~~ 213 (626)
+|+++|.+|.. .++ +|+.|++++|.++|.+|..+..
T Consensus 158 ~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~ 196 (313)
T 1ogq_A 158 GNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFAN 196 (313)
T ss_dssp SSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGG
T ss_pred CCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhC
Confidence 99999999974 466 8999999999999999987654
No 253
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=1.1e-25 Score=248.92 Aligned_cols=178 Identities=16% Similarity=0.247 Sum_probs=142.0
Q ss_pred cccccccCCCcceEEEEeCCCcEEEEEEcCCCCCC---------HHHHHHHHHHhccCCCCCccccceEEEeCCeEEEEE
Q 006903 350 PAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSIS---------SEDFKNRMQKIDHVKHPNVLPPLAYYCSKQEKLLVY 420 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~---------~~~~~~ei~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 420 (626)
+.++||+|+||.||+|.. .++.+|+|+....... .+.+.+|++++++++||||+++..++...+..++||
T Consensus 340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 457899999999999954 4788999986543321 234789999999999999998888888888899999
Q ss_pred eecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCC
Q 006903 421 EYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENH 500 (626)
Q Consensus 421 Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~ 500 (626)
||+++|+|.+++.. +..++.|+++||.||| +++|+||||||+|||+++ .+||+|||+++....
T Consensus 419 E~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH----~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 419 SYINGKLAKDVIED-----------NLDIAYKIGEIVGKLH----KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp ECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHH----HTTEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred ECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHH----HCcCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 99999999999953 4589999999999999 579999999999999999 999999999987544
Q ss_pred Cc----------cccccccccchhhcccc--CCCCCcchhHHHHHHHHHHHcCCCCC
Q 006903 501 DQ----------SFLAQTSSLKINDISNQ--MCSTIKADVYGFGVILLELLTGKLVQ 545 (626)
Q Consensus 501 ~~----------~~~~~~~~~~~pe~~~~--~~~~~k~DVwSfGvvl~elltg~~p~ 545 (626)
.. ....+++.|++||+... ..|+..+|+||..+-.++-+.++.++
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 21 23568899999998865 45677889999999888887766544
No 254
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.90 E-value=4.8e-24 Score=246.64 Aligned_cols=183 Identities=27% Similarity=0.335 Sum_probs=142.5
Q ss_pred hcccCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCcccEEecCCCCeEEEEEecCCCceec---cCc----
Q 006903 19 VVKSEVEEEVKRALVQFMEKLSVGNAARDPNWGWNRSSDPCSGKWVGVTCDSRQKSVRKIVLDGFNLSGI---LDT---- 91 (626)
Q Consensus 19 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~~~c~~~w~gv~c~~~~~~v~~l~L~~~~l~g~---~~~---- 91 (626)
++++...++|++||++||+++. ++. .+.+|+.++||| +|.||+|+ .++|+.|+|+++++.|. +++
T Consensus 4 ~~~~~~~~~~~~all~~k~~~~--~~~--~l~~W~~~~~~C--~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~ 75 (768)
T 3rgz_A 4 ASPSQSLYREIHQLISFKDVLP--DKN--LLPDWSSNKNPC--TFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLS 75 (768)
T ss_dssp ----CCHHHHHHHHHHHHTTCS--CTT--SSTTCCTTSCGG--GSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTT
T ss_pred CccccCCHHHHHHHHHHHhhCC--Ccc--cccCCCCCCCCc--CCcceEEC--CCcEEEEECCCCCcCCccCccChhHhc
Confidence 3344445789999999999996 333 578998778999 79999998 47999999999999997 543
Q ss_pred ------------------cccCCCCCccEEEcccCCCcccCCc--cccCCCCCcEEEeeccccccccChhh-hcCCCCCe
Q 006903 92 ------------------TSVCKTQSLVVLSLEENNIAGTVSQ--EISNCKQLTHLYVGRNKLSGNLPDSL-SKLNNLKR 150 (626)
Q Consensus 92 ------------------~~~~~l~~L~~L~ls~N~l~g~~p~--~~~~l~~L~~L~l~~N~l~g~ip~~~-~~l~~L~~ 150 (626)
..++.+++|++|+|++|.++|.+|. .++++++|++|+|++|.++|.+|..+ .++++|++
T Consensus 76 L~~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~ 155 (768)
T 3rgz_A 76 LTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEV 155 (768)
T ss_dssp CTTCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSE
T ss_pred cCcccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCE
Confidence 3567778888888888888888887 78888888888888888888888766 77888888
Q ss_pred EEccCCcCCccCCC----ccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCCCCC
Q 006903 151 LDISNNNFSSELPD----LSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPG 209 (626)
Q Consensus 151 L~ls~N~l~g~~p~----~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ip~ 209 (626)
|||++|++++.+|. +.++++|++|++++|.++|.+|...+++|+.|++++|.++|.+|.
T Consensus 156 L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 218 (768)
T 3rgz_A 156 LDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF 218 (768)
T ss_dssp EECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB
T ss_pred EECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc
Confidence 88888888877664 566777777777777777776666677777777777777777765
No 255
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.88 E-value=5.2e-23 Score=237.98 Aligned_cols=163 Identities=32% Similarity=0.585 Sum_probs=144.0
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccc----------------------------------
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEI---------------------------------- 118 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~---------------------------------- 118 (626)
.+++.|+|++|.++|.+|. .++.+++|+.|+|++|.++|.+|..+
T Consensus 514 ~~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (768)
T 3rgz_A 514 ENLAILKLSNNSFSGNIPA-ELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGN 592 (768)
T ss_dssp TTCCEEECCSSCCEEECCG-GGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEE
T ss_pred CCCCEEECCCCcccCcCCH-HHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccccccccc
Confidence 4577888888888888874 68888899999999998888887644
Q ss_pred ------------------------------------cCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccC
Q 006903 119 ------------------------------------SNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSEL 162 (626)
Q Consensus 119 ------------------------------------~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~ 162 (626)
+++++|++|||++|+|+|.||.+++++++|+.|||++|+|+|.+
T Consensus 593 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~i 672 (768)
T 3rgz_A 593 LLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSI 672 (768)
T ss_dssp EEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCC
T ss_pred ccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCC
Confidence 33567899999999999999999999999999999999999999
Q ss_pred CC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCC--CCCCcccCCCCCCCCCCCCCCCCCCCC
Q 006903 163 PD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGV--NGRLGADSFSGNPGLCGKPLPNACPPT 237 (626)
Q Consensus 163 p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~--~~~~~~~~~~gn~~lcg~~~~~~c~~~ 237 (626)
|. ++++++|+.||+++|+++|.||.. .+++|+.||+++|+|+|.||.. +.++...+|.||+++||.|++ .|...
T Consensus 673 p~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~~ 751 (768)
T 3rgz_A 673 PDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDPS 751 (768)
T ss_dssp CGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCSC
T ss_pred ChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCCCC
Confidence 97 999999999999999999999985 6889999999999999999975 457788899999999999886 88754
No 256
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.88 E-value=8.6e-23 Score=231.01 Aligned_cols=182 Identities=22% Similarity=0.355 Sum_probs=156.3
Q ss_pred HHHHHHHHHHHhccCCCCC-----CCCCCCCCCCCCCCCCCc---ccEEecCCCCeEEEEEecCCCceeccCccccCCCC
Q 006903 27 EVKRALVQFMEKLSVGNAA-----RDPNWGWNRSSDPCSGKW---VGVTCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQ 98 (626)
Q Consensus 27 ~~~~~l~~~~~~~~~~~~~-----~~~~~~w~~~~~~c~~~w---~gv~c~~~~~~v~~l~L~~~~l~g~~~~~~~~~l~ 98 (626)
.|+.||.++++++..++-. .....+|+.++|+| .| .||+|+.. ++|+.|+|++++|+|.+|+ .++.++
T Consensus 30 ~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c--~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~-~l~~L~ 105 (636)
T 4eco_A 30 KDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELD--MWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPD-AIGQLT 105 (636)
T ss_dssp HHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGG--GTTCCTTEEECTT-CCEEEEECTTSCCEEEECG-GGGGCT
T ss_pred HHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcc--cccCCCCeEEcCC-CCEEEEEecCcccCCcCCh-HHhcCc
Confidence 5888999999998532110 01234698888999 79 99999875 7999999999999999985 899999
Q ss_pred CccEEEcccCC---------------------------------------------------------------------
Q 006903 99 SLVVLSLEENN--------------------------------------------------------------------- 109 (626)
Q Consensus 99 ~L~~L~ls~N~--------------------------------------------------------------------- 109 (626)
+|+.|+|++|+
T Consensus 106 ~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~ 185 (636)
T 4eco_A 106 ELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKD 185 (636)
T ss_dssp TCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCT
T ss_pred cceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhh
Confidence 99999999984
Q ss_pred ---------CcccCCccccCCCCCcEEEeeccccccc-----------------cChhhh--cCCCCCeEEccCCcCCcc
Q 006903 110 ---------IAGTVSQEISNCKQLTHLYVGRNKLSGN-----------------LPDSLS--KLNNLKRLDISNNNFSSE 161 (626)
Q Consensus 110 ---------l~g~~p~~~~~l~~L~~L~l~~N~l~g~-----------------ip~~~~--~l~~L~~L~ls~N~l~g~ 161 (626)
++| ||..++++++|++|+|++|+|+|. +|+.++ ++++|++|+|++|+++|.
T Consensus 186 l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~ 264 (636)
T 4eco_A 186 TQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTK 264 (636)
T ss_dssp TTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSS
T ss_pred hhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCcc
Confidence 446 899999999999999999999996 999999 999999999999999999
Q ss_pred CCC-ccCcCCCcEEEcCCCc-ccc-cCCCC--C------CCCccEEEccCCcCCCCCCC--CCCCC
Q 006903 162 LPD-LSRISGLLTFFAENNQ-LRG-GIPEF--D------FSNLLQFNVSNNNLSGPVPG--VNGRL 214 (626)
Q Consensus 162 ~p~-~~~~~~L~~l~l~~N~-l~g-~ip~~--~------~~~L~~l~ls~N~l~g~ip~--~~~~~ 214 (626)
+|. ++++++|+.|++++|+ ++| .+|.. . +++|+.|++++|+++ .+|. .++.+
T Consensus 265 ~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l 329 (636)
T 4eco_A 265 LPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKM 329 (636)
T ss_dssp CCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTC
T ss_pred ChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccC
Confidence 997 9999999999999998 999 88863 2 389999999999999 8888 55443
No 257
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.88 E-value=5.9e-23 Score=237.50 Aligned_cols=177 Identities=22% Similarity=0.329 Sum_probs=154.5
Q ss_pred CHHHHHHHHHHHHhccCCCCCCCCCCCCCCCC-----CC--CCCCc------------ccEEecCCCCeEEEEEecCCCc
Q 006903 25 EEEVKRALVQFMEKLSVGNAARDPNWGWNRSS-----DP--CSGKW------------VGVTCDSRQKSVRKIVLDGFNL 85 (626)
Q Consensus 25 ~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~-----~~--c~~~w------------~gv~c~~~~~~v~~l~L~~~~l 85 (626)
..+|+.||++||+++.. + +|+.++ +| | .| .||+|+. .++|+.|+|++++|
T Consensus 267 ~~~d~~ALl~~k~~l~~--~------~W~~~~~~~~~~~~~C--~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L 335 (876)
T 4ecn_A 267 YIKDYKALKAIWEALDG--K------NWRYYSGTINNTIHSL--NWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGA 335 (876)
T ss_dssp HHHHHHHHHHHHHHTTG--G------GCCCCCSSCSSCCCCC--SCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCC
T ss_pred chHHHHHHHHHHHHcCC--C------CCCcCCCcccccCCcc--ccccccccccccCcCceEecC-CCCEEEEECccCCC
Confidence 34689999999999841 1 676554 67 7 79 9999987 46999999999999
Q ss_pred eeccCccccCCCCCccEEEc-ccCCCccc---------------------------------------------------
Q 006903 86 SGILDTTSVCKTQSLVVLSL-EENNIAGT--------------------------------------------------- 113 (626)
Q Consensus 86 ~g~~~~~~~~~l~~L~~L~l-s~N~l~g~--------------------------------------------------- 113 (626)
+|.+|+ .++.+++|+.|+| ++|.++|.
T Consensus 336 ~G~ip~-~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~ 414 (876)
T 4ecn_A 336 KGRVPD-AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEM 414 (876)
T ss_dssp EEEECG-GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTS
T ss_pred CCcCch-HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccc
Confidence 999985 8999999999999 88866665
Q ss_pred -------------------------CCccccCCCCCcEEEeecccccc-----------------ccChhhh--cCCCCC
Q 006903 114 -------------------------VSQEISNCKQLTHLYVGRNKLSG-----------------NLPDSLS--KLNNLK 149 (626)
Q Consensus 114 -------------------------~p~~~~~l~~L~~L~l~~N~l~g-----------------~ip~~~~--~l~~L~ 149 (626)
||..|+++++|++|+|++|+|+| .||+.++ ++++|+
T Consensus 415 ~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~ 494 (876)
T 4ecn_A 415 KPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLT 494 (876)
T ss_dssp CCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCC
T ss_pred cccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCC
Confidence 88899999999999999999999 4999987 999999
Q ss_pred eEEccCCcCCccCCC-ccCcCCCcEEEcCCCc-ccc-cCCCC---------CCCCccEEEccCCcCCCCCCC--CCCCC
Q 006903 150 RLDISNNNFSSELPD-LSRISGLLTFFAENNQ-LRG-GIPEF---------DFSNLLQFNVSNNNLSGPVPG--VNGRL 214 (626)
Q Consensus 150 ~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~-l~g-~ip~~---------~~~~L~~l~ls~N~l~g~ip~--~~~~~ 214 (626)
+|+|++|+++|.+|. +.++++|+.|++++|+ ++| .+|.. .+++|+.|++++|+|+ .||. .++.+
T Consensus 495 ~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L 572 (876)
T 4ecn_A 495 DVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKM 572 (876)
T ss_dssp EEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTC
T ss_pred EEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcC
Confidence 999999999999997 9999999999999998 999 88852 3459999999999999 8998 55443
No 258
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=3.4e-22 Score=202.78 Aligned_cols=128 Identities=17% Similarity=0.244 Sum_probs=107.0
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCC-------------------CHHHHHHHHHHhccCCCCCccccceEEE
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSI-------------------SSEDFKNRMQKIDHVKHPNVLPPLAYYC 411 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~-------------------~~~~~~~ei~~l~~l~H~nIv~l~g~~~ 411 (626)
.+.||+|+||.||+|...+|+.||||.++.... ....+.+|++++++++ | +++.+++.
T Consensus 95 ~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~ 171 (282)
T 1zar_A 95 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYA 171 (282)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEE
T ss_pred cCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEe
Confidence 478999999999999997799999999964321 1346889999999998 5 77777554
Q ss_pred eCCeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEee
Q 006903 412 SKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISE 491 (626)
Q Consensus 412 ~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~D 491 (626)
. +..++||||+++|+|.+ +.. .....++.|++.||.||| +.||+||||||+|||++ ++.+||+|
T Consensus 172 ~-~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH----~~giiHrDlkp~NILl~-~~~vkl~D 235 (282)
T 1zar_A 172 W-EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFY----HRGIVHGDLSQYNVLVS-EEGIWIID 235 (282)
T ss_dssp E-ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHH----HTTEECSCCSTTSEEEE-TTEEEECC
T ss_pred c-cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHH----HCCCEeCCCCHHHEEEE-CCcEEEEE
Confidence 3 56799999999999998 521 124579999999999999 67999999999999999 99999999
Q ss_pred ccCccc
Q 006903 492 YGLIVT 497 (626)
Q Consensus 492 FGl~~~ 497 (626)
||+++.
T Consensus 236 FG~a~~ 241 (282)
T 1zar_A 236 FPQSVE 241 (282)
T ss_dssp CTTCEE
T ss_pred CCCCeE
Confidence 999864
No 259
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.81 E-value=9.3e-21 Score=196.64 Aligned_cols=179 Identities=19% Similarity=0.290 Sum_probs=148.9
Q ss_pred CHHHHHHHHHHHHhccCCCCCCCCCCCC----CCCCCCCCCCcccEEecC--------CCCeEEEEEecCCCceeccCcc
Q 006903 25 EEEVKRALVQFMEKLSVGNAARDPNWGW----NRSSDPCSGKWVGVTCDS--------RQKSVRKIVLDGFNLSGILDTT 92 (626)
Q Consensus 25 ~~~~~~~l~~~~~~~~~~~~~~~~~~~w----~~~~~~c~~~w~gv~c~~--------~~~~v~~l~L~~~~l~g~~~~~ 92 (626)
..+++.||++||..+..+. . ....+| +...++| .|.|+.|+. ...+|+.|+|++|+|. .+|.
T Consensus 25 ~~~~~~aLl~~k~~~~~~~-~-~~~~~w~~~~~~~~~~~--~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~- 98 (328)
T 4fcg_A 25 LRPYHDVLSQWQRHYNADR-N-RWHSAWRQANSNNPQIE--TRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPD- 98 (328)
T ss_dssp CCCHHHHHHHHHHHHHHCC-T-THHHHHHHHTTTCTTSC--CSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCS-
T ss_pred CchHHHHHHHHHHhccCCc-h-hhhhhhccccccccccc--ccCCcchhhhHHHHhcccccceeEEEccCCCch-hcCh-
Confidence 3467889999999885322 1 123467 3456788 699999952 2367999999999998 6664
Q ss_pred ccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccC----
Q 006903 93 SVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSR---- 167 (626)
Q Consensus 93 ~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~---- 167 (626)
.++.+++|++|+|++|+++ .+|..++++++|++|+|++|+++ .+|..++++++|++|+|++|++.+.+|. +..
T Consensus 99 ~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~ 176 (328)
T 4fcg_A 99 QAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDAS 176 (328)
T ss_dssp CGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-C
T ss_pred hhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccch
Confidence 6888999999999999999 89999999999999999999999 8999999999999999999999999997 543
Q ss_pred -----cCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCCC
Q 006903 168 -----ISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNGR 213 (626)
Q Consensus 168 -----~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~~ 213 (626)
+++|+.|++++|+++ .+|.. .+++|+.|++++|.+++ +|..++.
T Consensus 177 ~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~ 227 (328)
T 4fcg_A 177 GEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHH 227 (328)
T ss_dssp CCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGG
T ss_pred hhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-Cchhhcc
Confidence 899999999999999 77764 58899999999999996 5544443
No 260
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.80 E-value=3.2e-20 Score=191.25 Aligned_cols=160 Identities=28% Similarity=0.501 Sum_probs=105.4
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCC-CCcEEEeeccccccccChh----------
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCK-QLTHLYVGRNKLSGNLPDS---------- 141 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~-~L~~L~l~~N~l~g~ip~~---------- 141 (626)
.+++.|+|++|.++|.+|. .+..+++|+.|+|++|.++|.+|..+.+++ +|++|+|++|+++|.+|..
T Consensus 125 ~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~ 203 (313)
T 1ogq_A 125 KTLVTLDFSYNALSGTLPP-SISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVD 203 (313)
T ss_dssp TTCCEEECCSSEEESCCCG-GGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEE
T ss_pred CCCCEEeCCCCccCCcCCh-HHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEE
Confidence 3466666666666665543 455666666666666666666666666655 5666666655555555544
Q ss_pred -------------hhcCCCCCeEEccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCC
Q 006903 142 -------------LSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGP 206 (626)
Q Consensus 142 -------------~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ 206 (626)
+.++++|+.|+|++|.+++.+|.+..+++|+.|++++|+++|.+|.. .+++|+.|++++|+++|.
T Consensus 204 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 283 (313)
T 1ogq_A 204 LSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGE 283 (313)
T ss_dssp CCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEE
T ss_pred CcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCccccc
Confidence 44555555555556666555555666677777777777777777763 477888888888888888
Q ss_pred CCCC--CCCCcccCCCCCCCCCCCCCCCCC
Q 006903 207 VPGV--NGRLGADSFSGNPGLCGKPLPNAC 234 (626)
Q Consensus 207 ip~~--~~~~~~~~~~gn~~lcg~~~~~~c 234 (626)
+|.. +.++....+.||+.+||.|++ .|
T Consensus 284 ip~~~~l~~L~~l~l~~N~~lc~~p~~-~C 312 (313)
T 1ogq_A 284 IPQGGNLQRFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp CCCSTTGGGSCGGGTCSSSEEESTTSS-CC
T ss_pred CCCCccccccChHHhcCCCCccCCCCC-CC
Confidence 8875 234555678899999997765 45
No 261
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.77 E-value=4.7e-19 Score=177.32 Aligned_cols=136 Identities=18% Similarity=0.213 Sum_probs=104.2
Q ss_pred cccccccCCCcceEEEEe-CCCcE--EEEEEcCCCCCC-------------------------HHHHHHHHHHhccCCCC
Q 006903 350 PAELLGRGKHGSLYRVVL-DDGLM--LAVKRLRDWSIS-------------------------SEDFKNRMQKIDHVKHP 401 (626)
Q Consensus 350 ~~~~lG~G~fG~Vy~~~~-~~g~~--vAvK~l~~~~~~-------------------------~~~~~~ei~~l~~l~H~ 401 (626)
..+.||+|+||.||+|.. .+|+. ||||+++..... ...+.+|++.+.+++|+
T Consensus 51 i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 130 (258)
T 1zth_A 51 MGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEA 130 (258)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHT
T ss_pred hCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhC
Confidence 347899999999999997 78989 999987543211 12578999999999988
Q ss_pred CccccceEEEeCCeEEEEEeecCC-C----ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCC
Q 006903 402 NVLPPLAYYCSKQEKLLVYEYQPN-G----SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKS 476 (626)
Q Consensus 402 nIv~l~g~~~~~~~~~lv~Ey~~~-g----~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp 476 (626)
++....-+.. +..++||||+.+ | +|.++... .++.....++.|++.||.|||. +.||+||||||
T Consensus 131 ~i~~p~~~~~--~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~---~~givHrDlkp 199 (258)
T 1zth_A 131 GVSVPQPYTY--MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQ---EAELVHADLSE 199 (258)
T ss_dssp TCCCCCEEEE--ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHH---TSCEECSSCST
T ss_pred CCCCCeEEEc--CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCH
Confidence 7533222222 357899999942 4 67666531 2244577899999999999994 36899999999
Q ss_pred CCeeeCCCCCeEEeeccCcccc
Q 006903 477 NNILFNNNMEPCISEYGLIVTE 498 (626)
Q Consensus 477 ~NILl~~~~~~kl~DFGl~~~~ 498 (626)
+|||+++ .++|+|||++...
T Consensus 200 ~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 200 YNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp TSEEESS--SEEECCCTTCEET
T ss_pred HHEEEcC--cEEEEECcccccC
Confidence 9999998 9999999998654
No 262
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.76 E-value=2.3e-18 Score=167.93 Aligned_cols=152 Identities=16% Similarity=0.215 Sum_probs=96.9
Q ss_pred CCCCCCcccEEecCCC---------CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEE
Q 006903 57 DPCSGKWVGVTCDSRQ---------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHL 127 (626)
Q Consensus 57 ~~c~~~w~gv~c~~~~---------~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 127 (626)
..|...|..+.|+.+. ..++.|+|++|+|++..+...+..+++|+.|+|++|+|++..|..|.++++|++|
T Consensus 7 ~~C~C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L 86 (220)
T 2v70_A 7 EKCRCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEI 86 (220)
T ss_dssp TTCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CCCEECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEE
Confidence 3454356666665431 2355667777777665544445666677777777777776555566677777777
Q ss_pred EeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCC
Q 006903 128 YVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLS 204 (626)
Q Consensus 128 ~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~ 204 (626)
+|++|+|++..|..|..+++|++|+|++|+|++..|. +..+++|+.|++++|++++..|.. .+++|+.|++++|.|+
T Consensus 87 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 87 LLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp ECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred ECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 7777777665555566677777777777777766654 666667777777777776665543 3666677777777666
Q ss_pred CCCC
Q 006903 205 GPVP 208 (626)
Q Consensus 205 g~ip 208 (626)
+..+
T Consensus 167 c~c~ 170 (220)
T 2v70_A 167 CNCY 170 (220)
T ss_dssp CSGG
T ss_pred CCCc
Confidence 5443
No 263
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.76 E-value=4.9e-18 Score=166.70 Aligned_cols=137 Identities=21% Similarity=0.308 Sum_probs=66.6
Q ss_pred CCCCCCCCCCCcccEEecCCCCeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeec
Q 006903 52 WNRSSDPCSGKWVGVTCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGR 131 (626)
Q Consensus 52 w~~~~~~c~~~w~gv~c~~~~~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~ 131 (626)
|......| +|.+|.|.... +. .+|. . -.++|+.|+|++|++++..|..+.++++|++|+|++
T Consensus 12 ~~~~~~~C--s~~~v~c~~~~------------l~-~ip~-~--~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 73 (229)
T 3e6j_A 12 ACPSQCSC--SGTTVDCRSKR------------HA-SVPA-G--IPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGS 73 (229)
T ss_dssp CCCTTCEE--ETTEEECTTSC------------CS-SCCS-C--CCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred cCCCCCEE--eCCEeEccCCC------------cC-ccCC-C--CCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCC
Confidence 44567889 69999997532 11 1211 1 113445555555555544444445555555555555
Q ss_pred cccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCC
Q 006903 132 NKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPV 207 (626)
Q Consensus 132 N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~i 207 (626)
|+|++..+..|..+++|++|+|++|+|++..+. +..+++|+.|++++|+++ .+|.. .+++|+.|++++|+|++..
T Consensus 74 N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~ 151 (229)
T 3e6j_A 74 NQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIP 151 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCC
T ss_pred CCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccC
Confidence 555432223344455555555555555444433 344455555555555554 33332 3444555555555554333
No 264
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.75 E-value=1e-17 Score=166.73 Aligned_cols=153 Identities=22% Similarity=0.262 Sum_probs=118.5
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
..++.|+|++|++++..+ ..+..+++|+.|+|++|++++..|..+.++++|++|+|++|+|++..|..+..+++|++|+
T Consensus 35 ~~l~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 113 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSD-ATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLY 113 (251)
T ss_dssp TTCCEEECTTSCCCCCCT-TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEEccCCCcCccCH-hHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEE
Confidence 357788888888887654 3677888889999999988887777788888899999999988876667788888899999
Q ss_pred ccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCCC---CcccCCCCCCCCC
Q 006903 153 ISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNGR---LGADSFSGNPGLC 226 (626)
Q Consensus 153 ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~~---~~~~~~~gn~~lc 226 (626)
|++|+|++..+. +..+++|+.|++++|++++..|.. .+++|+.|++++|++++..|..+.. +....+.+|+-.|
T Consensus 114 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 114 LGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred cCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 999988877766 678888899999999888665532 4788888999999888777655543 3333455665433
No 265
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.75 E-value=9.8e-18 Score=161.82 Aligned_cols=151 Identities=21% Similarity=0.243 Sum_probs=126.3
Q ss_pred CCCCCcccEEecCCC---------CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEE
Q 006903 58 PCSGKWVGVTCDSRQ---------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLY 128 (626)
Q Consensus 58 ~c~~~w~gv~c~~~~---------~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 128 (626)
.|...|.+|.|+... .+++.|+|++|++++.. +..+..+++|+.|+|++|++++..+..+.++++|++|+
T Consensus 4 ~C~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 82 (208)
T 2o6s_A 4 RCSCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLP-NGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLN 82 (208)
T ss_dssp TCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCC-TTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCEECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCC-hhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEE
Confidence 454479999997542 35889999999998644 44578899999999999999976666678999999999
Q ss_pred eeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCC
Q 006903 129 VGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 129 l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g 205 (626)
|++|++++..+..+..+++|++|+|++|+|++..+. +..+++|+.|++++|++++..+.. .+++|+.|++++|.+++
T Consensus 83 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 162 (208)
T 2o6s_A 83 LSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 162 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC
T ss_pred CCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec
Confidence 999999976666689999999999999999987776 788999999999999999765542 47889999999998888
Q ss_pred CCCC
Q 006903 206 PVPG 209 (626)
Q Consensus 206 ~ip~ 209 (626)
..|.
T Consensus 163 ~~~~ 166 (208)
T 2o6s_A 163 TCPG 166 (208)
T ss_dssp CTTT
T ss_pred CCCC
Confidence 7764
No 266
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=9.4e-18 Score=160.00 Aligned_cols=149 Identities=19% Similarity=0.291 Sum_probs=119.0
Q ss_pred EEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCc-cccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccC
Q 006903 77 KIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQ-EISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISN 155 (626)
Q Consensus 77 ~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~ 155 (626)
.+++++++|. .+|. .+. .+|+.|+|++|++++..|. .+.++++|++|+|++|+|++.+|..|..+++|++|+|++
T Consensus 12 ~l~~s~~~l~-~ip~-~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 12 TVDCTGRGLK-EIPR-DIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EEECTTSCCS-SCCS-CCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred EEEcCCCCcC-cCcc-CCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 5777888884 4553 333 3899999999999976664 489999999999999999998899999999999999999
Q ss_pred CcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCC-CC-CCcccCCCCCCCCCCCC
Q 006903 156 NNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGV-NG-RLGADSFSGNPGLCGKP 229 (626)
Q Consensus 156 N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~-~~-~~~~~~~~gn~~lcg~~ 229 (626)
|+|++..|. +..+++|+.|++++|++++.+|.. .+++|+.|++++|.|++..+-. +. .+....+.++...|+.|
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 999998887 889999999999999999988864 5889999999999999887632 11 11222344555556544
No 267
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.71 E-value=4.1e-17 Score=159.06 Aligned_cols=129 Identities=20% Similarity=0.295 Sum_probs=77.9
Q ss_pred CCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEc
Q 006903 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFA 176 (626)
Q Consensus 98 ~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l 176 (626)
++|+.|+|++|+|++..|..|..+++|+.|+|++|++++..|..|.++++|++|+|++|+|+...+. +..+++|+.|++
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 4566666666666655555666666666666666666665566666666666666666666654444 556666666666
Q ss_pred CCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCCC---CcccCCCCCCCCC
Q 006903 177 ENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNGR---LGADSFSGNPGLC 226 (626)
Q Consensus 177 ~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~~---~~~~~~~gn~~lc 226 (626)
++|++++..|.. .+++|+.|++++|.|++..|..+.. +....+.+|+..|
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 666666555542 3566666666666666655544432 2233445555444
No 268
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.70 E-value=3.4e-17 Score=169.71 Aligned_cols=148 Identities=19% Similarity=0.200 Sum_probs=128.2
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccC---------CCCCcEEEeeccccccccChhhh
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISN---------CKQLTHLYVGRNKLSGNLPDSLS 143 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~---------l~~L~~L~l~~N~l~g~ip~~~~ 143 (626)
.+++.|+|++|.++ .+|. .+..+++|+.|+|++|++.|.+|..+.. +++|++|+|++|+++ .+|..++
T Consensus 127 ~~L~~L~Ls~n~l~-~lp~-~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~ 203 (328)
T 4fcg_A 127 AGLETLTLARNPLR-ALPA-SIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIA 203 (328)
T ss_dssp TTCSEEEEESCCCC-CCCG-GGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGG
T ss_pred CCCCEEECCCCccc-cCcH-HHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhc
Confidence 46899999999999 6664 6889999999999999999999988765 999999999999998 8999999
Q ss_pred cCCCCCeEEccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCCCCcc---cC
Q 006903 144 KLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNGRLGA---DS 218 (626)
Q Consensus 144 ~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~~~~~---~~ 218 (626)
++++|++|+|++|++++.++.+..+++|+.|++++|++.+.+|.. .+++|+.|++++|++.+.+|..++.++. ..
T Consensus 204 ~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~ 283 (328)
T 4fcg_A 204 NLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLD 283 (328)
T ss_dssp GCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEE
T ss_pred CCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEe
Confidence 999999999999999986666999999999999999999999874 5889999999999999999987654433 34
Q ss_pred CCCCC
Q 006903 219 FSGNP 223 (626)
Q Consensus 219 ~~gn~ 223 (626)
+.+|.
T Consensus 284 L~~n~ 288 (328)
T 4fcg_A 284 LRGCV 288 (328)
T ss_dssp CTTCT
T ss_pred CCCCC
Confidence 55554
No 269
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.67 E-value=4.6e-16 Score=156.69 Aligned_cols=151 Identities=23% Similarity=0.287 Sum_probs=128.8
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|.+.+. +.+..+++|++|+|++|.+++..|..+.++++|++|+|++|++++..|..+..+++|++|+
T Consensus 63 ~~L~~L~l~~n~l~~~---~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 63 PNVRYLALGGNKLHDI---SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp TTCCEEECTTSCCCCC---GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCCc---hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 5789999999999873 2688999999999999999987777789999999999999999987777789999999999
Q ss_pred ccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCCCC---cccCCCCCCCCC
Q 006903 153 ISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNGRL---GADSFSGNPGLC 226 (626)
Q Consensus 153 ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~~~---~~~~~~gn~~lc 226 (626)
|++|+|++..|. +..+++|+.|++++|++++..|.. .+++|+.|++++|.+++..|..+..+ ....+.+|+..|
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 219 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc
Confidence 999999988776 789999999999999999776653 58899999999999999888665443 334556665444
No 270
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.66 E-value=4.4e-16 Score=148.34 Aligned_cols=171 Identities=18% Similarity=0.260 Sum_probs=131.5
Q ss_pred CCCCCcccEEecCCC---------CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEE
Q 006903 58 PCSGKWVGVTCDSRQ---------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLY 128 (626)
Q Consensus 58 ~c~~~w~gv~c~~~~---------~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 128 (626)
.|.-.|..|.|..+. ..++.|+|++|++++..+...+..+++|+.|+|++|+|++..|..|.++++|++|+
T Consensus 5 ~C~C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 84 (192)
T 1w8a_A 5 MCHCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQ 84 (192)
T ss_dssp TSEEETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred CCEECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEE
Confidence 444468888886542 36889999999998876544578999999999999999999999999999999999
Q ss_pred eeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCCCCC-CccEEEccCCcCCCC
Q 006903 129 VGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEFDFS-NLLQFNVSNNNLSGP 206 (626)
Q Consensus 129 l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~~~~-~L~~l~ls~N~l~g~ 206 (626)
|++|+|++..|..|..+++|++|+|++|+|++.+|. +..+++|+.|++++|.+++..+...+. .++...+..+.....
T Consensus 85 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~ 164 (192)
T 1w8a_A 85 LGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCG 164 (192)
T ss_dssp CCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBC
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCC
Confidence 999999998888899999999999999999999887 899999999999999999887642211 122223444555545
Q ss_pred CCCCCCCCcccCCCCCCCCCCC
Q 006903 207 VPGVNGRLGADSFSGNPGLCGK 228 (626)
Q Consensus 207 ip~~~~~~~~~~~~gn~~lcg~ 228 (626)
.|..+....-..+..+.-.|..
T Consensus 165 ~P~~l~~~~l~~l~~~~~~C~~ 186 (192)
T 1w8a_A 165 APSKVRDVQIKDLPHSEFKCSS 186 (192)
T ss_dssp SSTTTTTSBGGGSCTTTCCCCC
T ss_pred CChHHcCCChhhCcHhhcCcCC
Confidence 5555444333344444434543
No 271
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.66 E-value=1.4e-16 Score=167.37 Aligned_cols=169 Identities=20% Similarity=0.176 Sum_probs=135.4
Q ss_pred CCCCCcccEEecCCC---------CeEEEEEecCCCceeccCccccC-CCCCccEEEcccCCCcccCCccccCCCCCcEE
Q 006903 58 PCSGKWVGVTCDSRQ---------KSVRKIVLDGFNLSGILDTTSVC-KTQSLVVLSLEENNIAGTVSQEISNCKQLTHL 127 (626)
Q Consensus 58 ~c~~~w~gv~c~~~~---------~~v~~l~L~~~~l~g~~~~~~~~-~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 127 (626)
.|...+..|.|.... ..++.|+|++|+|++..+. .+. .+++|+.|+|++|+|++..|..|.++++|++|
T Consensus 15 ~C~C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~-~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L 93 (361)
T 2xot_A 15 NCLCASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAE-WTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYL 93 (361)
T ss_dssp TCEEETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTT-SSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CCEECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChh-hhhhcccccCEEECCCCcCCccChhhccCCCCCCEE
Confidence 454357778886532 3478899999999986543 455 89999999999999998877889999999999
Q ss_pred EeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC-----CCCCccEEEccCC
Q 006903 128 YVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF-----DFSNLLQFNVSNN 201 (626)
Q Consensus 128 ~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~-----~~~~L~~l~ls~N 201 (626)
+|++|+|++..|..|..+++|+.|+|++|+|++..|. +..+++|+.|++++|++++..+.. .+++|+.|++++|
T Consensus 94 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N 173 (361)
T 2xot_A 94 DLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSN 173 (361)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSS
T ss_pred ECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCC
Confidence 9999999977777899999999999999999998776 899999999999999999643332 3789999999999
Q ss_pred cCCCCCCCCCCCCc-----ccCCCCCCCCCC
Q 006903 202 NLSGPVPGVNGRLG-----ADSFSGNPGLCG 227 (626)
Q Consensus 202 ~l~g~ip~~~~~~~-----~~~~~gn~~lcg 227 (626)
+|++..+..+..++ ...+.+|+..|.
T Consensus 174 ~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 174 KLKKLPLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp CCCCCCHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred CCCccCHHHhhhccHhhcceEEecCCCccCC
Confidence 99965444443332 245667776663
No 272
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.64 E-value=1e-15 Score=152.20 Aligned_cols=135 Identities=21% Similarity=0.237 Sum_probs=120.7
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|++++..+ ..+..+++|+.|+|++|++++..|..+..+++|++|+|++|+|++..|..+..+++|+.|+
T Consensus 59 ~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 137 (251)
T 3m19_A 59 TKLTWLNLDYNQLQTLSA-GVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELR 137 (251)
T ss_dssp TTCCEEECTTSCCCCCCT-TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccCCEEECCCCcCCccCH-hHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEE
Confidence 579999999999998654 4688999999999999999987778889999999999999999976666689999999999
Q ss_pred ccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCC
Q 006903 153 ISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 153 ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip 208 (626)
|++|+|++..|. +..+++|+.|++++|++++..|.. .+++|+.|++++|.|++..+
T Consensus 138 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 138 LNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTST
T ss_pred CcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCcc
Confidence 999999988885 899999999999999999776643 58899999999999998744
No 273
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.64 E-value=9.9e-16 Score=154.26 Aligned_cols=137 Identities=23% Similarity=0.272 Sum_probs=122.7
Q ss_pred CCeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeE
Q 006903 72 QKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRL 151 (626)
Q Consensus 72 ~~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L 151 (626)
..+++.|+|++|++++..+ ..+..+++|+.|+|++|++++..|..+.++++|++|+|++|++++..|..+..+++|+.|
T Consensus 84 l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 162 (272)
T 3rfs_A 84 LTNLTYLILTGNQLQSLPN-GVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTEL 162 (272)
T ss_dssp CTTCCEEECTTSCCCCCCT-TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCccCccCh-hHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEE
Confidence 3579999999999997654 467899999999999999998777778999999999999999998777778999999999
Q ss_pred EccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCC
Q 006903 152 DISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPG 209 (626)
Q Consensus 152 ~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~ 209 (626)
+|++|++++..|. +..+++|+.|++++|++++..|.. .+++|+.|++++|.++|..|.
T Consensus 163 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 223 (272)
T 3rfs_A 163 DLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 223 (272)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred ECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCcH
Confidence 9999999988776 789999999999999999877753 588999999999999998884
No 274
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.64 E-value=1.1e-15 Score=148.81 Aligned_cols=158 Identities=15% Similarity=0.231 Sum_probs=128.8
Q ss_pred CCCCCCcccEEecCCCCeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCc-cccCCCCCcEEEeeccccc
Q 006903 57 DPCSGKWVGVTCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQ-EISNCKQLTHLYVGRNKLS 135 (626)
Q Consensus 57 ~~c~~~w~gv~c~~~~~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~l~~L~~L~l~~N~l~ 135 (626)
..|. .+-.|.. +.+++++|+|+. +|. .+ ...++.|+|++|+|++..|. .|.++++|++|+|++|+|+
T Consensus 3 ~~CP---~~C~C~~-----~~l~~s~n~l~~-iP~-~~--~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~ 70 (220)
T 2v70_A 3 LACP---EKCRCEG-----TTVDCSNQKLNK-IPE-HI--PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKIT 70 (220)
T ss_dssp -CCC---TTCEEET-----TEEECCSSCCSS-CCS-CC--CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCC
T ss_pred CCCC---CCCEECC-----CEeEeCCCCccc-Ccc-CC--CCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCC
Confidence 3574 3345753 268999999986 443 23 34578999999999987664 5789999999999999999
Q ss_pred cccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCC
Q 006903 136 GNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNG 212 (626)
Q Consensus 136 g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~ 212 (626)
+..|..|.++++|++|+|++|+|++..|. +..+++|++|++++|++++..|.. .+++|+.|++++|++++..|..+.
T Consensus 71 ~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 150 (220)
T 2v70_A 71 DIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFD 150 (220)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTT
T ss_pred EECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhc
Confidence 88777999999999999999999998887 899999999999999999887764 588999999999999998888765
Q ss_pred CCc---ccCCCCCCCCC
Q 006903 213 RLG---ADSFSGNPGLC 226 (626)
Q Consensus 213 ~~~---~~~~~gn~~lc 226 (626)
.+. ...+.+|+-.|
T Consensus 151 ~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 151 TLHSLSTLNLLANPFNC 167 (220)
T ss_dssp TCTTCCEEECCSCCEEC
T ss_pred CCCCCCEEEecCcCCcC
Confidence 433 34556666444
No 275
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.64 E-value=5.1e-17 Score=169.47 Aligned_cols=137 Identities=16% Similarity=0.202 Sum_probs=96.9
Q ss_pred ccccccccCCCcceEEEEeCCCcEEEEEEcCCCCC---------------CHHHH--------HHHHHHhccCCCCCccc
Q 006903 349 APAELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSI---------------SSEDF--------KNRMQKIDHVKHPNVLP 405 (626)
Q Consensus 349 ~~~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~---------------~~~~~--------~~ei~~l~~l~H~nIv~ 405 (626)
...+.||+|+||.||+|...+|+.||||+++.... ..... .+|...|.++.+.++..
T Consensus 98 ~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~v 177 (397)
T 4gyi_A 98 SVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPV 177 (397)
T ss_dssp EEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSC
T ss_pred EecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 34678999999999999988999999998753210 01111 24555555554433322
Q ss_pred cceEEEeCCeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCC
Q 006903 406 PLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNM 485 (626)
Q Consensus 406 l~g~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~ 485 (626)
..-+.. ...+|||||+++++|.++... .....++.|++.+|.||| ..|||||||||.|||+++++
T Consensus 178 p~p~~~--~~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH----~~gIVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 178 PEPIAQ--SRHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLA----KHGLIHGDFNEFNILIREEK 242 (397)
T ss_dssp CCEEEE--ETTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHH----HTTEECSCCSTTSEEEEEEE
T ss_pred Ceeeec--cCceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHH----HCCCcCCCCCHHHEEEeCCC
Confidence 222212 224799999999888776531 123567899999999999 57999999999999999876
Q ss_pred C----------eEEeeccCccccCC
Q 006903 486 E----------PCISEYGLIVTENH 500 (626)
Q Consensus 486 ~----------~kl~DFGl~~~~~~ 500 (626)
. +.|.||+-+....+
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~~~h 267 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVSMDH 267 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEETTS
T ss_pred CcccccccccceEEEEeCCcccCCC
Confidence 3 88999998765443
No 276
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.64 E-value=2.7e-16 Score=151.66 Aligned_cols=138 Identities=22% Similarity=0.270 Sum_probs=122.0
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|++++. ++..+..+++|++|+|++|++++..+..+.++++|++|+|++|++++..|..+..+++|+.|+
T Consensus 52 ~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 130 (208)
T 2o6s_A 52 TSLTQLYLGGNKLQSL-PNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLR 130 (208)
T ss_dssp TTCSEEECCSSCCCCC-CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccCcEEECCCCccCcc-ChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEE
Confidence 5799999999999965 444578899999999999999976666789999999999999999977666789999999999
Q ss_pred ccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCCCCCCCCCCcc
Q 006903 153 ISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPGVNGRLGA 216 (626)
Q Consensus 153 ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ip~~~~~~~~ 216 (626)
|++|+|++..+. +..+++|+.|++++|.+.+.. ++|+.|+++.|+++|.+|..++.+..
T Consensus 131 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~-----~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 131 LYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC-----PGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCT-----TTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred CCCCccceeCHHHhccCCCccEEEecCCCeecCC-----CCHHHHHHHHHhCCceeeccCccccC
Confidence 999999987776 889999999999999998765 47899999999999999998876554
No 277
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.64 E-value=1.6e-15 Score=152.58 Aligned_cols=137 Identities=22% Similarity=0.277 Sum_probs=94.2
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEc
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDI 153 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~l 153 (626)
.++.|+|++|++++.. +..+..+++|+.|+|++|+++...+..+.++++|++|+|++|++++..+..+..+++|++|+|
T Consensus 38 ~l~~L~l~~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLP-SKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TCSEEECCSSCCSCCC-TTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCEEECcCCCCCeeC-HHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 4667777777776543 335667777777777777777544444567777777777777777655555677777777777
Q ss_pred cCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCC
Q 006903 154 SNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVN 211 (626)
Q Consensus 154 s~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~ 211 (626)
++|++++..|. +..+++|+.|++++|++++..+.. .+++|+.|++++|.+++..|..+
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 177 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAF 177 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTT
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHh
Confidence 77777776665 677777777777777777544431 46677777777777776555443
No 278
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.64 E-value=3.1e-16 Score=174.01 Aligned_cols=153 Identities=20% Similarity=0.259 Sum_probs=133.6
Q ss_pred CCCCCcccEEecCC-----------CCeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcE
Q 006903 58 PCSGKWVGVTCDSR-----------QKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTH 126 (626)
Q Consensus 58 ~c~~~w~gv~c~~~-----------~~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 126 (626)
.| .|.|+ |+.. ..+++.|+|++|++++..| ..+..+++|++|+|++|++++..|..|.++++|++
T Consensus 3 ~C--~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 78 (549)
T 2z81_A 3 SC--DASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGH-GDLRACANLQVLILKSSRINTIEGDAFYSLGSLEH 78 (549)
T ss_dssp EE--CTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECS-STTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred cC--CCCce-EECCCCccccccccCCCCccEEECcCCccCccCh-hhhhcCCcccEEECCCCCcCccChhhccccccCCE
Confidence 47 58887 8643 1369999999999998765 47899999999999999999988899999999999
Q ss_pred EEeeccccccccChhhhcCCCCCeEEccCCcCCc-cCC-CccCcCCCcEEEcCCCcccccCCCC---CCCCccEEEccCC
Q 006903 127 LYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSS-ELP-DLSRISGLLTFFAENNQLRGGIPEF---DFSNLLQFNVSNN 201 (626)
Q Consensus 127 L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g-~~p-~~~~~~~L~~l~l~~N~l~g~ip~~---~~~~L~~l~ls~N 201 (626)
|+|++|++++..|..|+++++|++|||++|.+++ .+| .+.++++|++|++++|.+.+.+|.. .+++|+.|++++|
T Consensus 79 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n 158 (549)
T 2z81_A 79 LDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKAL 158 (549)
T ss_dssp EECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEET
T ss_pred EECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCC
Confidence 9999999998777779999999999999999996 344 4999999999999999987788753 5788999999999
Q ss_pred cCCCCCCCCCCCC
Q 006903 202 NLSGPVPGVNGRL 214 (626)
Q Consensus 202 ~l~g~ip~~~~~~ 214 (626)
.+++.+|..++.+
T Consensus 159 ~l~~~~~~~l~~l 171 (549)
T 2z81_A 159 SLRNYQSQSLKSI 171 (549)
T ss_dssp TCCEECTTTTTTC
T ss_pred cccccChhhhhcc
Confidence 9999999876543
No 279
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.63 E-value=2.5e-15 Score=151.07 Aligned_cols=154 Identities=21% Similarity=0.250 Sum_probs=129.8
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|++++ +++..+..+++|+.|+|++|.+++..+..+.++++|++|+|++|++++..|..|..+++|++|+
T Consensus 61 ~~L~~L~l~~n~l~~-i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 139 (270)
T 2o6q_A 61 TKLRLLYLNDNKLQT-LPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLS 139 (270)
T ss_dssp TTCCEEECCSSCCSC-CCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCe-eChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEE
Confidence 579999999999985 4444567899999999999999987777789999999999999999988788899999999999
Q ss_pred ccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCCC---CcccCCCCCCCCC
Q 006903 153 ISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNGR---LGADSFSGNPGLC 226 (626)
Q Consensus 153 ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~~---~~~~~~~gn~~lc 226 (626)
|++|.+++..+. +..+++|+.|++++|++++..|.. .+++|+.|++++|.+++..+..+.. +....+.+|+..|
T Consensus 140 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 140 LGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 999999987776 889999999999999999766542 5789999999999999766655443 3344567776555
Q ss_pred C
Q 006903 227 G 227 (626)
Q Consensus 227 g 227 (626)
.
T Consensus 220 ~ 220 (270)
T 2o6q_A 220 T 220 (270)
T ss_dssp S
T ss_pred C
Confidence 3
No 280
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.63 E-value=6.6e-16 Score=173.87 Aligned_cols=147 Identities=18% Similarity=0.202 Sum_probs=127.8
Q ss_pred cEEecCCC---------CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccc
Q 006903 65 GVTCDSRQ---------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLS 135 (626)
Q Consensus 65 gv~c~~~~---------~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 135 (626)
.|.|.... ..++.|+|++|+|++.. +..+..+++|++|+|++|+|++..|..|.++++|++|+|++|+|+
T Consensus 35 ~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~-~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~ 113 (635)
T 4g8a_A 35 TYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLG-SYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 113 (635)
T ss_dssp EEECTTSCCSSCCSSSCTTCCEEECTTSCCCEEC-TTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred EEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCC-HHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCC
Confidence 46786431 46899999999999755 457899999999999999999877778999999999999999999
Q ss_pred cccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccc-cCCCC--CCCCccEEEccCCcCCCCCCCCC
Q 006903 136 GNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRG-GIPEF--DFSNLLQFNVSNNNLSGPVPGVN 211 (626)
Q Consensus 136 g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g-~ip~~--~~~~L~~l~ls~N~l~g~ip~~~ 211 (626)
+..|..|.+|++|++|+|++|++++..|. ++++++|+.|++++|++++ .+|.. .+++|+.|++++|++++..|..+
T Consensus 114 ~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l 193 (635)
T 4g8a_A 114 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL 193 (635)
T ss_dssp EECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGG
T ss_pred CCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccc
Confidence 76667799999999999999999998775 8999999999999999986 45654 58899999999999998877665
Q ss_pred C
Q 006903 212 G 212 (626)
Q Consensus 212 ~ 212 (626)
.
T Consensus 194 ~ 194 (635)
T 4g8a_A 194 R 194 (635)
T ss_dssp H
T ss_pred c
Confidence 4
No 281
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.63 E-value=2.4e-15 Score=146.48 Aligned_cols=149 Identities=15% Similarity=0.186 Sum_probs=128.8
Q ss_pred CCCCCCcccEEecCCC---------CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEE
Q 006903 57 DPCSGKWVGVTCDSRQ---------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHL 127 (626)
Q Consensus 57 ~~c~~~w~gv~c~~~~---------~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 127 (626)
..|...|..|.|.... ..++.|+|++|++++..+ ..+..+++|+.|+|++|++++..|..|.++++|++|
T Consensus 7 ~~C~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~-~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L 85 (220)
T 2v9t_B 7 AACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPP-GAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 85 (220)
T ss_dssp TTSEEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECT-TSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEE
T ss_pred CCCEECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCH-hHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEE
Confidence 3454468899997542 368999999999997654 478899999999999999999889999999999999
Q ss_pred EeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCC
Q 006903 128 YVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLS 204 (626)
Q Consensus 128 ~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~ 204 (626)
+|++|+|++..+..|..+++|++|+|++|+|++..|. +..+++|+.|++++|++++..+.. .+++|+.|++++|.|+
T Consensus 86 ~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 86 VLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 9999999955445578999999999999999998886 899999999999999999877652 5889999999999987
Q ss_pred CC
Q 006903 205 GP 206 (626)
Q Consensus 205 g~ 206 (626)
..
T Consensus 166 c~ 167 (220)
T 2v9t_B 166 CD 167 (220)
T ss_dssp CS
T ss_pred CC
Confidence 53
No 282
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.63 E-value=6.4e-16 Score=167.25 Aligned_cols=149 Identities=15% Similarity=0.196 Sum_probs=131.6
Q ss_pred cEEecCCC--------CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCC-ccccCCCCCcEEEeeccccc
Q 006903 65 GVTCDSRQ--------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVS-QEISNCKQLTHLYVGRNKLS 135 (626)
Q Consensus 65 gv~c~~~~--------~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~ 135 (626)
.|.|+... .+++.|+|++|++++..| ..+..+++|++|+|++|.+.+.+| ..|.++++|++|+|++|+++
T Consensus 14 ~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~ 92 (455)
T 3v47_A 14 NAICINRGLHQVPELPAHVNYVDLSLNSIAELNE-TSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFL 92 (455)
T ss_dssp EEECCSSCCSSCCCCCTTCCEEECCSSCCCEECT-TTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTC
T ss_pred ccCcCCCCcccCCCCCCccCEEEecCCccCcCCh-hHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccC
Confidence 37886542 468999999999998765 478999999999999999998775 56899999999999999999
Q ss_pred cccChhhhcCCCCCeEEccCCcCCccCCC---ccCcCCCcEEEcCCCcccccCCCC---CCCCccEEEccCCcCCCCCCC
Q 006903 136 GNLPDSLSKLNNLKRLDISNNNFSSELPD---LSRISGLLTFFAENNQLRGGIPEF---DFSNLLQFNVSNNNLSGPVPG 209 (626)
Q Consensus 136 g~ip~~~~~l~~L~~L~ls~N~l~g~~p~---~~~~~~L~~l~l~~N~l~g~ip~~---~~~~L~~l~ls~N~l~g~ip~ 209 (626)
+.+|..|+++++|++|+|++|++++.+|. +..+++|+.|++++|++++..|.. .+++|+.|++++|.+++..|.
T Consensus 93 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 172 (455)
T 3v47_A 93 QLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEE 172 (455)
T ss_dssp EECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTT
T ss_pred ccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChh
Confidence 99999999999999999999999986543 889999999999999999988863 589999999999999999988
Q ss_pred CCCCC
Q 006903 210 VNGRL 214 (626)
Q Consensus 210 ~~~~~ 214 (626)
.+..+
T Consensus 173 ~l~~l 177 (455)
T 3v47_A 173 DLLNF 177 (455)
T ss_dssp TSGGG
T ss_pred hhhcc
Confidence 76543
No 283
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.62 E-value=2.9e-15 Score=152.36 Aligned_cols=129 Identities=22% Similarity=0.241 Sum_probs=75.4
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEc
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDI 153 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~l 153 (626)
.++.|+|++|.+++..+ ..+..+++|+.|+|++|++++. |.. +.+++|++|+|++|+|+ .+|..+..+++|++|+|
T Consensus 32 ~l~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l 107 (290)
T 1p9a_G 32 DTTILHLSENLLYTFSL-ATLMPYTRLTQLNLDRAELTKL-QVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107 (290)
T ss_dssp TCCEEECTTSCCSEEEG-GGGTTCTTCCEEECTTSCCCEE-ECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEEC
T ss_pred CCCEEEcCCCcCCccCH-HHhhcCCCCCEEECCCCccCcc-cCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEEC
Confidence 45666666666665443 2456666666666666666642 222 55666666666666665 45655666666666666
Q ss_pred cCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCC
Q 006903 154 SNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGP 206 (626)
Q Consensus 154 s~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ 206 (626)
++|+|++..|. +..+++|+.|++++|++++..|.. .+++|+.|++++|+|++.
T Consensus 108 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 163 (290)
T 1p9a_G 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTEL 163 (290)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCC
T ss_pred CCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCcc
Confidence 66666655544 556666666666666666443321 345566666666666543
No 284
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.62 E-value=1.1e-15 Score=154.17 Aligned_cols=138 Identities=19% Similarity=0.203 Sum_probs=120.7
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
..++.|+|++|++++..+ ..+..+++|+.|+|++|++++..+..+.++++|++|+|++|++++..|..+.++++|++|+
T Consensus 28 ~~l~~L~ls~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGS-YSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (276)
T ss_dssp TTCCEEECTTCCCCEECT-TTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred CCccEEECCCCcccccCH-hHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEE
Confidence 358999999999998654 3688899999999999999987777899999999999999999988888899999999999
Q ss_pred ccCCcCCccCCC-ccCcCCCcEEEcCCCcccc-cCCCC--CCCCccEEEccCCcCCCCCCCCC
Q 006903 153 ISNNNFSSELPD-LSRISGLLTFFAENNQLRG-GIPEF--DFSNLLQFNVSNNNLSGPVPGVN 211 (626)
Q Consensus 153 ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g-~ip~~--~~~~L~~l~ls~N~l~g~ip~~~ 211 (626)
+++|++++..+. +..+++|+.|++++|++++ .+|.. .+++|+.|++++|.+++..|..+
T Consensus 107 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 169 (276)
T 2z62_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL 169 (276)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGG
T ss_pred CCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHh
Confidence 999999988774 8999999999999999987 45653 58899999999999987666544
No 285
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.62 E-value=1e-15 Score=156.79 Aligned_cols=134 Identities=19% Similarity=0.226 Sum_probs=75.7
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCC-ccccCCCCCcEEEeeccccccccChhhhcCCCCCeE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVS-QEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRL 151 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L 151 (626)
.+++.|+|++|.+.+. +. .+..+++|+.|+|++|++++..+ ..+.++++|++|+|++|.+++.+|..+..+++|++|
T Consensus 78 ~~L~~L~Ls~n~i~~l-~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 155 (306)
T 2z66_A 78 TSLKYLDLSFNGVITM-SS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 155 (306)
T ss_dssp SCCCEEECCSCSEEEE-EE-EEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEE
T ss_pred cccCEEECCCCccccC-hh-hcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEE
Confidence 3566666666666542 22 35556666666666666655433 345556666666666666665555555666666666
Q ss_pred EccCCcCCc-cCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCC
Q 006903 152 DISNNNFSS-ELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 152 ~ls~N~l~g-~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip 208 (626)
+|++|.+++ .+|. +..+++|+.|++++|++++..|.. .+++|+.|++++|.+++..+
T Consensus 156 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 216 (306)
T 2z66_A 156 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDT 216 (306)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCS
T ss_pred ECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccCh
Confidence 666666655 3343 555566666666666665554432 34556666666666555443
No 286
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.62 E-value=1.3e-15 Score=154.28 Aligned_cols=141 Identities=18% Similarity=0.209 Sum_probs=118.0
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCC-CcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENN-IAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRL 151 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~-l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L 151 (626)
.+++.|+|++|.+++..+ ..+..+++|+.|+|++|. +....|..+..+++|++|+|++|++++..|..+.++++|++|
T Consensus 56 ~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 134 (285)
T 1ozn_A 56 RNLTILWLHSNVLARIDA-AAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYL 134 (285)
T ss_dssp TTCCEEECCSSCCCEECT-TTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCEEECCCCccceeCH-hhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEE
Confidence 578899999999987655 367888999999999997 776667888899999999999999998778888999999999
Q ss_pred EccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCC-C-CCCCccEEEccCCcCCCCCCCCCCCC
Q 006903 152 DISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPE-F-DFSNLLQFNVSNNNLSGPVPGVNGRL 214 (626)
Q Consensus 152 ~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~-~-~~~~L~~l~ls~N~l~g~ip~~~~~~ 214 (626)
+|++|.+++..+. +..+++|+.|++++|++++..+. + .+++|+.|++++|.+++..|..+..+
T Consensus 135 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 200 (285)
T 1ozn_A 135 YLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDL 200 (285)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred ECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCc
Confidence 9999999887776 78899999999999999866554 2 47889999999999988888776543
No 287
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.62 E-value=1.1e-15 Score=160.03 Aligned_cols=158 Identities=19% Similarity=0.223 Sum_probs=127.0
Q ss_pred CCCCCCCCCCCcccEEecCC-----------CCeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccC
Q 006903 52 WNRSSDPCSGKWVGVTCDSR-----------QKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISN 120 (626)
Q Consensus 52 w~~~~~~c~~~w~gv~c~~~-----------~~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~ 120 (626)
|.....+| .|.|+ |+-. ..+++.|+|++|++++.. +..+..+++|+.|+|++|++++..|..+.+
T Consensus 23 ~~~~~~~C--~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (353)
T 2z80_A 23 SNQASLSC--DRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYIS-NSDLQRCVNLQALVLTSNGINTIEEDSFSS 98 (353)
T ss_dssp ----CCEE--CTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEEC-TTTTTTCTTCCEEECTTSCCCEECTTTTTT
T ss_pred CCccCCCC--CCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccC-HHHhccCCCCCEEECCCCccCccCHhhcCC
Confidence 34446678 58887 6532 136899999999999754 446889999999999999999988888999
Q ss_pred CCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCC--CccCcCCCcEEEcCCCc-ccccCCCC--CCCCccE
Q 006903 121 CKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELP--DLSRISGLLTFFAENNQ-LRGGIPEF--DFSNLLQ 195 (626)
Q Consensus 121 l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p--~~~~~~~L~~l~l~~N~-l~g~ip~~--~~~~L~~ 195 (626)
+++|++|+|++|++++..+..+.++++|++|+|++|++++..+ .+..+++|+.|++++|+ +++..|.. .+++|+.
T Consensus 99 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~ 178 (353)
T 2z80_A 99 LGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEE 178 (353)
T ss_dssp CTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEE
T ss_pred CCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCE
Confidence 9999999999999996444448999999999999999997665 38899999999999995 55443432 5788999
Q ss_pred EEccCCcCCCCCCCCCCC
Q 006903 196 FNVSNNNLSGPVPGVNGR 213 (626)
Q Consensus 196 l~ls~N~l~g~ip~~~~~ 213 (626)
|++++|.+++.+|..+..
T Consensus 179 L~l~~n~l~~~~~~~l~~ 196 (353)
T 2z80_A 179 LEIDASDLQSYEPKSLKS 196 (353)
T ss_dssp EEEEETTCCEECTTTTTT
T ss_pred EECCCCCcCccCHHHHhc
Confidence 999999999887776543
No 288
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.62 E-value=5.8e-15 Score=144.71 Aligned_cols=135 Identities=19% Similarity=0.162 Sum_probs=116.6
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
..++.|+|++|++++..+ ..+..+++|+.|+|++|+|++..+..+..+++|++|+|++|+|++..|..+..+++|+.|+
T Consensus 40 ~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~ 118 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEP-GVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELF 118 (229)
T ss_dssp TTCSEEECCSSCCCCCCT-TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEEcCCCccCccCH-HHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEe
Confidence 579999999999998765 4788999999999999999865556679999999999999999977667789999999999
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip 208 (626)
|++|+|+...+.+..+++|+.|++++|++++..+.. .+++|+.|++++|.+++..+
T Consensus 119 Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 119 MCCNKLTELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCSSCCCSCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred ccCCcccccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 999999954345999999999999999999665542 57899999999999875543
No 289
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.61 E-value=2.8e-16 Score=179.76 Aligned_cols=179 Identities=24% Similarity=0.325 Sum_probs=114.4
Q ss_pred CHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCcccEEecCCCCeEEEEEe------------------cCCCce
Q 006903 25 EEEVKRALVQFMEKLSVGNAARDPNWGWNRSSDPCSGKWVGVTCDSRQKSVRKIVL------------------DGFNLS 86 (626)
Q Consensus 25 ~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~~~c~~~w~gv~c~~~~~~v~~l~L------------------~~~~l~ 86 (626)
.+.++++|++++.+..... ......|.....++. .|.+++++. ++++.|+| +.|.+.
T Consensus 130 ~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~s~--~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~ 204 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSK--TAKKQQPTGDSTPSG-TATNSAVST--PLTPKIELFANGKDEANQALLQHKKLSQYSID 204 (727)
T ss_dssp --CCCHHHHHHHHHHHHHH--TTC--------------------------------------------------------
T ss_pred cccchhhhhhhhhhccccc--CcccCCCcCCCCccc-cCCCceecC--CccceEEeeCCCCCcchhhHhhcCccCccccc
Confidence 3446778999988764211 112335544433443 587776654 33444444 333333
Q ss_pred e--------ccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcC
Q 006903 87 G--------ILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158 (626)
Q Consensus 87 g--------~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l 158 (626)
+ .+++..+..+..|+.|+|++|.+. .+|..+.++++|++|+|++|.|+ .||..|++|++|++|||++|+|
T Consensus 205 ~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l 282 (727)
T 4b8c_D 205 EDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRL 282 (727)
T ss_dssp -----------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCC
T ss_pred CccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcC
Confidence 2 123345677889999999999998 78988999999999999999999 8999999999999999999999
Q ss_pred CccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCC
Q 006903 159 SSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNG 212 (626)
Q Consensus 159 ~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~ 212 (626)
+ .+|. ++.+++|+.|+|++|.|+ .||.. .+++|+.|+|++|.|+|.+|..+.
T Consensus 283 ~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 337 (727)
T 4b8c_D 283 T-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILT 337 (727)
T ss_dssp S-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHH
T ss_pred C-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHh
Confidence 9 5665 999999999999999997 77764 588999999999999999887653
No 290
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.61 E-value=3.4e-15 Score=140.05 Aligned_cols=112 Identities=21% Similarity=0.260 Sum_probs=98.3
Q ss_pred CCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEE
Q 006903 97 TQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFF 175 (626)
Q Consensus 97 l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~ 175 (626)
.++|+.|+|++|++++..+..+.++++|++|+|++|+|++..|..+..+++|++|+|++|+|++.++. +..+++|+.|+
T Consensus 27 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 106 (177)
T 2o6r_A 27 PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELA 106 (177)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEE
Confidence 46899999999999987667789999999999999999976666689999999999999999988776 78999999999
Q ss_pred cCCCcccccCCCC--CCCCccEEEccCCcCCCCCC
Q 006903 176 AENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 176 l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip 208 (626)
+++|++++..+.. .+++|+.|++++|.+++..|
T Consensus 107 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 107 LDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 9999999655542 47899999999999998876
No 291
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.60 E-value=2.3e-15 Score=169.13 Aligned_cols=140 Identities=19% Similarity=0.196 Sum_probs=127.5
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|++++..+ ..+..+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 32 ~~l~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKS-YSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp TTCCEEECTTSCCCEECT-TTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCcCEEECCCCCcCEeCh-hhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 568999999999998765 4789999999999999999998899999999999999999999998899999999999999
Q ss_pred ccCCcCCccCCC-ccCcCCCcEEEcCCCcccc-cCCCC--CCCCccEEEccCCcCCCCCCCCCCC
Q 006903 153 ISNNNFSSELPD-LSRISGLLTFFAENNQLRG-GIPEF--DFSNLLQFNVSNNNLSGPVPGVNGR 213 (626)
Q Consensus 153 ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g-~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~~ 213 (626)
|++|.+++..|. ++++++|++|++++|.+++ .+|.. .+++|+.|++++|++++..|..++.
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 175 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQF 175 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHH
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhh
Confidence 999999988765 9999999999999999986 67864 6899999999999999988876543
No 292
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.60 E-value=2.4e-15 Score=162.93 Aligned_cols=146 Identities=23% Similarity=0.223 Sum_probs=112.4
Q ss_pred CCCCcccEEecCCC---------CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEe
Q 006903 59 CSGKWVGVTCDSRQ---------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYV 129 (626)
Q Consensus 59 c~~~w~gv~c~~~~---------~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 129 (626)
|...|..|.|.... ..++.|+|++|++++..+ ..+..+++|+.|+|++|++++..|..|.++++|++|+|
T Consensus 52 C~~~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 130 (452)
T 3zyi_A 52 CSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQA-DTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLEL 130 (452)
T ss_dssp ECSSSCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECT-TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred ECCCCcEEEECCCCcCccCCCCCCCccEEECcCCcCceECH-HHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEEC
Confidence 44457788886542 468999999999998665 47889999999999999999988889999999999999
Q ss_pred eccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC---CCCCccEEEccCCcCCC
Q 006903 130 GRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF---DFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 130 ~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~---~~~~L~~l~ls~N~l~g 205 (626)
++|+|++..+..+..+++|++|+|++|+|+...+. +.++++|+.|++++|+..+.+|.. .+++|+.|++++|++++
T Consensus 131 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 210 (452)
T 3zyi_A 131 FDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD 210 (452)
T ss_dssp CSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS
T ss_pred CCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc
Confidence 99999976666688999999999999999876654 666677777777665544455442 34555555555555553
No 293
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.60 E-value=4.5e-16 Score=175.88 Aligned_cols=139 Identities=18% Similarity=0.273 Sum_probs=124.9
Q ss_pred CeEEEEEecCCCceec-----------------cCccccC--CCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccc
Q 006903 73 KSVRKIVLDGFNLSGI-----------------LDTTSVC--KTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNK 133 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~-----------------~~~~~~~--~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 133 (626)
.+++.|+|++|.|+|. +|. .++ .+++|++|+|++|++.|.+|..|+++++|++|+|++|+
T Consensus 206 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~-~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 206 TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTE-DLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTS-CCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred cCCCEEECcCCccccccccccccccccchhcccCch-hhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 5799999999999996 765 788 99999999999999999999999999999999999998
Q ss_pred -ccc-ccChhhhcC------CCCCeEEccCCcCCccCCC---ccCcCCCcEEEcCCCcccccCCCC-CCCCccEEEccCC
Q 006903 134 -LSG-NLPDSLSKL------NNLKRLDISNNNFSSELPD---LSRISGLLTFFAENNQLRGGIPEF-DFSNLLQFNVSNN 201 (626)
Q Consensus 134 -l~g-~ip~~~~~l------~~L~~L~ls~N~l~g~~p~---~~~~~~L~~l~l~~N~l~g~ip~~-~~~~L~~l~ls~N 201 (626)
|+| .+|..++++ ++|++|+|++|+|+ .+|. +.++++|+.|++++|+++|.+|.+ .+++|+.|++++|
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~~~l~~L~~L~L~~N 363 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLPAFGSEIKLASLNLAYN 363 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECCCCEEEEEESEEECCSS
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchhhhCCCCCCCEEECCCC
Confidence 999 999999887 99999999999999 6765 899999999999999999999943 3678888999999
Q ss_pred cCCCCCCCCCCCC
Q 006903 202 NLSGPVPGVNGRL 214 (626)
Q Consensus 202 ~l~g~ip~~~~~~ 214 (626)
.++ .+|..+..+
T Consensus 364 ~l~-~lp~~l~~l 375 (636)
T 4eco_A 364 QIT-EIPANFCGF 375 (636)
T ss_dssp EEE-ECCTTSEEE
T ss_pred ccc-cccHhhhhh
Confidence 888 778765443
No 294
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.60 E-value=1.4e-15 Score=170.91 Aligned_cols=135 Identities=16% Similarity=0.148 Sum_probs=66.0
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCC-ccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVS-QEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
+++.|+|++|.+.+. | ..+..+++|+.|+|++|.+.+..| ..+.++++|++|+|++|.+++.+|..+..+++|++|+
T Consensus 377 ~L~~L~L~~n~l~~~-~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 454 (606)
T 3vq2_A 377 SLRHLDLSFNGAIIM-S-ANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLK 454 (606)
T ss_dssp CCCEEECCSCSEEEE-C-CCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEE
T ss_pred cccEeECCCCccccc-h-hhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEE
Confidence 455566666655542 2 234445555555555555554444 3444555555555555555554454455555555555
Q ss_pred ccCCcCCcc-CCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCC
Q 006903 153 ISNNNFSSE-LPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGV 210 (626)
Q Consensus 153 ls~N~l~g~-~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~ 210 (626)
|++|.+++. +|. +..+++|+.|++++|++++.+|.. .+++|+.|++++|++++.+|..
T Consensus 455 l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 516 (606)
T 3vq2_A 455 MAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSH 516 (606)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGG
T ss_pred CCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHH
Confidence 555555442 333 444455555555555555444432 3444444555555444444443
No 295
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.60 E-value=1.3e-15 Score=168.45 Aligned_cols=139 Identities=29% Similarity=0.425 Sum_probs=114.7
Q ss_pred CCCCCCCCCCC---CcccE-EecCCCCeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcE
Q 006903 51 GWNRSSDPCSG---KWVGV-TCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTH 126 (626)
Q Consensus 51 ~w~~~~~~c~~---~w~gv-~c~~~~~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 126 (626)
+|..+.++|.. .|.|+ .|.. .+++.|+|++|+|++ +|. .+ +++|+.|+|++|+|+ .+| ..+++|++
T Consensus 35 ~W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~-~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~ 104 (571)
T 3cvr_A 35 KWEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPD-NL--PPQITVLEITQNALI-SLP---ELPASLEY 104 (571)
T ss_dssp HHHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCS-CC--CTTCSEEECCSSCCS-CCC---CCCTTCCE
T ss_pred HHhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCH-hH--cCCCCEEECcCCCCc-ccc---cccCCCCE
Confidence 46666788865 49999 7865 469999999999998 654 34 378999999999999 688 45789999
Q ss_pred EEeeccccccccChhhhcCCCCCeEEccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCC
Q 006903 127 LYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGP 206 (626)
Q Consensus 127 L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ 206 (626)
|+|++|+|++ ||. +.+ +|+.|+|++|+|++ +|. .+++|+.|++++|++++ +|. .+++|+.|++++|.|++
T Consensus 105 L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~--~l~~L~~L~Ls~N~l~~-lp~-~l~~L~~L~Ls~N~L~~- 174 (571)
T 3cvr_A 105 LDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE--LPALLEYINADNNQLTM-LPE-LPTSLEVLSVRNNQLTF- 174 (571)
T ss_dssp EECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCSC-
T ss_pred EEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC--cCccccEEeCCCCccCc-CCC-cCCCcCEEECCCCCCCC-
Confidence 9999999997 888 655 89999999999998 666 67889999999999987 776 67889999999999887
Q ss_pred CCC
Q 006903 207 VPG 209 (626)
Q Consensus 207 ip~ 209 (626)
+|.
T Consensus 175 lp~ 177 (571)
T 3cvr_A 175 LPE 177 (571)
T ss_dssp CCC
T ss_pred cch
Confidence 776
No 296
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.60 E-value=1.7e-15 Score=155.60 Aligned_cols=146 Identities=16% Similarity=0.175 Sum_probs=78.6
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCccc--CC--ccccCCCCCcEEEeeccccccccCh---h-hhcC
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGT--VS--QEISNCKQLTHLYVGRNKLSGNLPD---S-LSKL 145 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~--~p--~~~~~l~~L~~L~l~~N~l~g~ip~---~-~~~l 145 (626)
+++.|+|++|++.+..+ ..+..+++|++|+|++|++.+. ++ ..+.++++|++|+|++|+++ .+|. . +..+
T Consensus 146 ~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l 223 (310)
T 4glp_A 146 GLKVLSIAQAHSPAFSC-EQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAG 223 (310)
T ss_dssp CCCEEEEECCSSCCCCT-TSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHT
T ss_pred CCCEEEeeCCCcchhhH-HHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcC
Confidence 45556666666654433 2455566666666666665542 22 12245566666666666664 2222 1 3556
Q ss_pred CCCCeEEccCCcCCccCCC-ccCc---CCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCC-CCCCCCCCCcccCCC
Q 006903 146 NNLKRLDISNNNFSSELPD-LSRI---SGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSG-PVPGVNGRLGADSFS 220 (626)
Q Consensus 146 ~~L~~L~ls~N~l~g~~p~-~~~~---~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g-~ip~~~~~~~~~~~~ 220 (626)
++|++|||++|+|++.+|. +..+ ++|+.|++++|+++ .+|...+++|+.|++++|++++ +++..+.++....+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~L~ 302 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNRLNRAPQPDELPEVDNLTLD 302 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCCCCSCCCTTSCCCCSCEECS
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhcCCCCEEECCCCcCCCCchhhhCCCccEEECc
Confidence 6666666666666666443 4443 46666666666666 5555445666666666666665 333333333333444
Q ss_pred CC
Q 006903 221 GN 222 (626)
Q Consensus 221 gn 222 (626)
+|
T Consensus 303 ~N 304 (310)
T 4glp_A 303 GN 304 (310)
T ss_dssp ST
T ss_pred CC
Confidence 44
No 297
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.60 E-value=1.8e-15 Score=164.90 Aligned_cols=150 Identities=21% Similarity=0.224 Sum_probs=128.1
Q ss_pred CCCCcccEEecCCC---------CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEe
Q 006903 59 CSGKWVGVTCDSRQ---------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYV 129 (626)
Q Consensus 59 c~~~w~gv~c~~~~---------~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 129 (626)
|...|..|.|.... ..++.|+|++|++++..+ ..+..+++|+.|+|++|.+++..|..|.++++|++|+|
T Consensus 9 C~~~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 87 (477)
T 2id5_A 9 CSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQ-DEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGL 87 (477)
T ss_dssp EETTTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECT-TTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred ECCCCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECH-hHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEEC
Confidence 44457788886432 468899999999998665 47889999999999999999988999999999999999
Q ss_pred eccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCC
Q 006903 130 GRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGP 206 (626)
Q Consensus 130 ~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ 206 (626)
++|++++..+..|.++++|++|+|++|.+++.+|. +..+++|+.|++++|.+++..|.. .+++|+.|++++|.+++.
T Consensus 88 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 167 (477)
T 2id5_A 88 RSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSI 167 (477)
T ss_dssp CSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSC
T ss_pred CCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCccc
Confidence 99999965555689999999999999999998886 899999999999999999877653 578999999999999875
Q ss_pred CCC
Q 006903 207 VPG 209 (626)
Q Consensus 207 ip~ 209 (626)
.+.
T Consensus 168 ~~~ 170 (477)
T 2id5_A 168 PTE 170 (477)
T ss_dssp CHH
T ss_pred Chh
Confidence 543
No 298
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.60 E-value=3.8e-15 Score=161.16 Aligned_cols=134 Identities=19% Similarity=0.220 Sum_probs=76.1
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEc
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDI 153 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~l 153 (626)
.++.|+|++|++.+.++. .+..+++|+.|+|++|++++..|..|.++++|++|+|++|++++..|..+..+++|++|||
T Consensus 276 ~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 276 GVKTCDLSKSKIFALLKS-VFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp CCCEEECCSSCCCEECTT-TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred CceEEEecCccccccchh-hcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 455555555555554432 4555556666666666666555555556666666666666665555555555666666666
Q ss_pred cCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCC
Q 006903 154 SNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 154 s~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip 208 (626)
++|++++.+|. +..+++|+.|++++|++++..+.. .+++|+.|++++|.+++.+|
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 66666555554 555566666666666665433321 35555666666666665555
No 299
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.59 E-value=5.7e-15 Score=149.61 Aligned_cols=139 Identities=19% Similarity=0.264 Sum_probs=121.8
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccc-cccccChhhhcCCCCCeE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNK-LSGNLPDSLSKLNNLKRL 151 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~-l~g~ip~~~~~l~~L~~L 151 (626)
..++.|+|++|++++..+ ..+..+++|+.|+|++|.+++..|..+.++++|++|+|++|. +++..|..+..+++|++|
T Consensus 32 ~~l~~L~l~~n~i~~~~~-~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPA-ASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp TTCSEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCceEEEeeCCcCCccCH-HHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 468999999999998654 468899999999999999999889999999999999999998 776668889999999999
Q ss_pred EccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCC
Q 006903 152 DISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNG 212 (626)
Q Consensus 152 ~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~ 212 (626)
+|++|.+++..|. +..+++|+.|++++|++++..+.. .+++|+.|++++|.+++..+..+.
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 174 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFR 174 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTT
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhc
Confidence 9999999998776 889999999999999999766642 588999999999999876655444
No 300
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.59 E-value=1.2e-15 Score=166.81 Aligned_cols=113 Identities=18% Similarity=0.103 Sum_probs=77.3
Q ss_pred CCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhh-cCCCCCeEEccCCcCCccCCCccCcCCCcEEE
Q 006903 97 TQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLS-KLNNLKRLDISNNNFSSELPDLSRISGLLTFF 175 (626)
Q Consensus 97 l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~-~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~ 175 (626)
+++|+.|+|++|.+++..|..++++++|++|+|++|.|++.+|..+. .+++|+.|+|++|.|++. |....+++|+.|+
T Consensus 119 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~~~~l~~L~~L~ 197 (487)
T 3oja_A 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQVVFAKLKTLD 197 (487)
T ss_dssp CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCCCCTTCCEEE
T ss_pred cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cccccCCCCCEEE
Confidence 45677777777777776666777777777777777777776666665 677777777777777765 3344567777777
Q ss_pred cCCCcccccCCCC-CCCCccEEEccCCcCCCCCCCCC
Q 006903 176 AENNQLRGGIPEF-DFSNLLQFNVSNNNLSGPVPGVN 211 (626)
Q Consensus 176 l~~N~l~g~ip~~-~~~~L~~l~ls~N~l~g~ip~~~ 211 (626)
+++|.+++..|.+ .+++|+.|++++|.|++ +|..+
T Consensus 198 Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l 233 (487)
T 3oja_A 198 LSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKAL 233 (487)
T ss_dssp CCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTC
T ss_pred CCCCCCCCCCHhHcCCCCccEEEecCCcCcc-cchhh
Confidence 7777777655543 46677777777777775 55443
No 301
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.59 E-value=2.9e-15 Score=139.21 Aligned_cols=129 Identities=20% Similarity=0.227 Sum_probs=115.2
Q ss_pred CeEEEEEecCCCce-eccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeE
Q 006903 73 KSVRKIVLDGFNLS-GILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRL 151 (626)
Q Consensus 73 ~~v~~l~L~~~~l~-g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L 151 (626)
.+++.|+|++|+++ |.+|. .+..+++|+.|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~-~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEG-LTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSS-CCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred ccCCEEECCCCCCChhhHHH-HHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 56899999999998 77875 578899999999999999976 789999999999999999998899989899999999
Q ss_pred EccCCcCCccC--CCccCcCCCcEEEcCCCcccccCC----C-CCCCCccEEEccCCcCC
Q 006903 152 DISNNNFSSEL--PDLSRISGLLTFFAENNQLRGGIP----E-FDFSNLLQFNVSNNNLS 204 (626)
Q Consensus 152 ~ls~N~l~g~~--p~~~~~~~L~~l~l~~N~l~g~ip----~-~~~~~L~~l~ls~N~l~ 204 (626)
+|++|++++.. +.+..+++|+.|++++|.+++..+ . ..+++|+.|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 99999999854 458999999999999999997665 2 25899999999999875
No 302
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.58 E-value=9.9e-16 Score=178.82 Aligned_cols=134 Identities=24% Similarity=0.283 Sum_probs=114.2
Q ss_pred cCCCCCccEEEcccCCCcccCCc-cccCCCCCcEEEeeccccc-----cccChhhhcCCCCCeEEccCCcCCccCCC-cc
Q 006903 94 VCKTQSLVVLSLEENNIAGTVSQ-EISNCKQLTHLYVGRNKLS-----GNLPDSLSKLNNLKRLDISNNNFSSELPD-LS 166 (626)
Q Consensus 94 ~~~l~~L~~L~ls~N~l~g~~p~-~~~~l~~L~~L~l~~N~l~-----g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~ 166 (626)
++.+++|+.|+|++|++++..+. .+..+++|+.|+|++|.++ +..|..|..+++|+.|||++|+|++.+|. +.
T Consensus 422 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 501 (844)
T 3j0a_A 422 LLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFS 501 (844)
T ss_dssp HTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSS
T ss_pred hhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHcc
Confidence 34788899999999999875443 3567889999999999997 45566788999999999999999998887 89
Q ss_pred CcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCCCCCCCCCCcccCCCCCCCCCC
Q 006903 167 RISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPGVNGRLGADSFSGNPGLCG 227 (626)
Q Consensus 167 ~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~gn~~lcg 227 (626)
.+++|+.|++++|++++..|....++|+.|++++|+|+|.+|..+..+....+.||+..|.
T Consensus 502 ~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~ 562 (844)
T 3j0a_A 502 HLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICE 562 (844)
T ss_dssp SCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCS
T ss_pred chhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCChhHhCCcCEEEecCCCcccc
Confidence 9999999999999999876665458999999999999999999887777777788887773
No 303
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.58 E-value=2.1e-15 Score=174.45 Aligned_cols=147 Identities=16% Similarity=0.239 Sum_probs=128.7
Q ss_pred CeEEEEEecCCCcee-----------------ccCccccC--CCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccc
Q 006903 73 KSVRKIVLDGFNLSG-----------------ILDTTSVC--KTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNK 133 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g-----------------~~~~~~~~--~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 133 (626)
.+++.|+|++|.|+| .+|. .++ .+++|+.|+|++|++.|.+|..|+++++|+.|+|++|+
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~-~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENE-ELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTS-CCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCCh-hhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 579999999999999 4765 677 99999999999999999999999999999999999998
Q ss_pred -ccc-ccChhhhcCC-------CCCeEEccCCcCCccCCC---ccCcCCCcEEEcCCCcccccCCCC-CCCCccEEEccC
Q 006903 134 -LSG-NLPDSLSKLN-------NLKRLDISNNNFSSELPD---LSRISGLLTFFAENNQLRGGIPEF-DFSNLLQFNVSN 200 (626)
Q Consensus 134 -l~g-~ip~~~~~l~-------~L~~L~ls~N~l~g~~p~---~~~~~~L~~l~l~~N~l~g~ip~~-~~~~L~~l~ls~ 200 (626)
|+| .+|..+++++ +|+.|+|++|+|+ .+|. +.++++|+.|++++|+++ .+|.+ .+++|+.|++++
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~~L~~L~Ls~ 604 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNVKLTDLKLDY 604 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCCTTSEESEEECCS
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhhcCCCcceEEECcC
Confidence 999 9999888776 9999999999999 6776 899999999999999999 88854 478999999999
Q ss_pred CcCCCCCCCCCCCCcc----cCCCCCC
Q 006903 201 NNLSGPVPGVNGRLGA----DSFSGNP 223 (626)
Q Consensus 201 N~l~g~ip~~~~~~~~----~~~~gn~ 223 (626)
|.++ .+|..+..+.. ..+.+|.
T Consensus 605 N~l~-~lp~~l~~l~~~L~~L~Ls~N~ 630 (876)
T 4ecn_A 605 NQIE-EIPEDFCAFTDQVEGLGFSHNK 630 (876)
T ss_dssp SCCS-CCCTTSCEECTTCCEEECCSSC
T ss_pred Cccc-cchHHHhhccccCCEEECcCCC
Confidence 9999 88877654433 3445553
No 304
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.57 E-value=5.4e-15 Score=141.30 Aligned_cols=126 Identities=17% Similarity=0.217 Sum_probs=63.7
Q ss_pred EEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEcc
Q 006903 75 VRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDIS 154 (626)
Q Consensus 75 v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls 154 (626)
++.|+|++|++. .++ .+..+++|+.|+|++|.++ .++.+..+++|++|+|++|++++..|..++.+++|++|+|+
T Consensus 46 L~~L~l~~n~i~-~l~--~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls 120 (197)
T 4ezg_A 46 LTYITLANINVT-DLT--GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDIS 120 (197)
T ss_dssp CCEEEEESSCCS-CCT--TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECC
T ss_pred ccEEeccCCCcc-ChH--HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEec
Confidence 445555555554 222 2445555555555555433 22345555555555555555555455555555555555555
Q ss_pred CCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC-CCCCccEEEccCCcCCC
Q 006903 155 NNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF-DFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 155 ~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~-~~~~L~~l~ls~N~l~g 205 (626)
+|.+++..|. +..+++|+.|++++|.+.+.+|.. .+++|+.|++++|.+++
T Consensus 121 ~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~l~~l~~L~~L~l~~n~i~~ 173 (197)
T 4ezg_A 121 HSAHDDSILTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFDGVHD 173 (197)
T ss_dssp SSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGGGGGCSSCCEEECTTBCCCC
T ss_pred CCccCcHhHHHHhhCCCCCEEEccCCCCccccHhhcCCCCCCEEECCCCCCcC
Confidence 5555554433 555555555555555533334332 34555555555555544
No 305
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.57 E-value=1.1e-14 Score=146.62 Aligned_cols=112 Identities=21% Similarity=0.247 Sum_probs=67.0
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|++++..+ ..+..+++|+.|+|++|.+++..|..+.++++|++|+|++|++++..+..+.++++|++|+
T Consensus 52 ~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 130 (276)
T 2z62_A 52 PELQVLDLSRCEIQTIED-GAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 130 (276)
T ss_dssp TTCSEEECTTCCCCEECT-TTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred cCCcEEECCCCcCCccCH-HHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEE
Confidence 346666666666665432 2455666666666666666665555666666666666666666654444566666666666
Q ss_pred ccCCcCCc-cCCC-ccCcCCCcEEEcCCCcccccC
Q 006903 153 ISNNNFSS-ELPD-LSRISGLLTFFAENNQLRGGI 185 (626)
Q Consensus 153 ls~N~l~g-~~p~-~~~~~~L~~l~l~~N~l~g~i 185 (626)
|++|.+++ .+|. +..+++|+.|++++|++++..
T Consensus 131 l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~ 165 (276)
T 2z62_A 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY 165 (276)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEEC
T ss_pred CcCCccceecCchhhccCCCCCEEECCCCCCCcCC
Confidence 66666655 2343 556666666666666665543
No 306
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.57 E-value=2.6e-15 Score=136.55 Aligned_cols=125 Identities=20% Similarity=0.226 Sum_probs=109.6
Q ss_pred CeEEEEEecCCCce-eccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeE
Q 006903 73 KSVRKIVLDGFNLS-GILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRL 151 (626)
Q Consensus 73 ~~v~~l~L~~~~l~-g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L 151 (626)
.+++.|+|++|+++ |.+|. .+..+++|+.|+|++|.+++. ..+.++++|++|+|++|++++.+|..+..+++|++|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~-~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEG-LTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCS-CCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred ccCeEEEccCCcCChhHHHH-HHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 46889999999998 77875 678999999999999999976 779999999999999999998899988899999999
Q ss_pred EccCCcCCccC--CCccCcCCCcEEEcCCCcccccCC---C--CCCCCccEEEccC
Q 006903 152 DISNNNFSSEL--PDLSRISGLLTFFAENNQLRGGIP---E--FDFSNLLQFNVSN 200 (626)
Q Consensus 152 ~ls~N~l~g~~--p~~~~~~~L~~l~l~~N~l~g~ip---~--~~~~~L~~l~ls~ 200 (626)
+|++|.+++.. +.+..+++|+.|++++|.+++..+ . ..+++|+.|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 99999999843 458999999999999999998765 1 2588999998763
No 307
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.57 E-value=4.2e-15 Score=166.80 Aligned_cols=172 Identities=16% Similarity=0.125 Sum_probs=131.1
Q ss_pred CCCCCCCCCCCCC--CcccEEecCC----------------CCeEEEEEecCCCceeccCccccCCCCCccEEEcccCCC
Q 006903 49 NWGWNRSSDPCSG--KWVGVTCDSR----------------QKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNI 110 (626)
Q Consensus 49 ~~~w~~~~~~c~~--~w~gv~c~~~----------------~~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l 110 (626)
..+|....++|.. .|.++.|+.. ...++.++++++.+.+ +|+..+..+++|+.|+|++|.+
T Consensus 9 l~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~~-lp~~~~~~l~~L~~L~L~~n~l 87 (597)
T 3oja_B 9 VKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRK-LPAALLDSFRQVELLNLNDLQI 87 (597)
T ss_dssp --CCCSEECCCCC--CCSEEECSCEECSSCCCCEESCSSGGGCCCSEEEESSCEESE-ECTHHHHHCCCCSEEECTTSCC
T ss_pred ccCCCCCCcCcccCcCceeEecCceecccccccccCcccccCCCceEEEeeCCCCCC-cCHHHHccCCCCcEEECCCCCC
Confidence 4567665566632 2766665411 0346778888888765 4444567889999999999999
Q ss_pred cccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC-
Q 006903 111 AGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF- 188 (626)
Q Consensus 111 ~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~- 188 (626)
++..|..|+++++|++|+|++|.+++..|..|+.+++|++|+|++|.|++.+|. +..+++|+.|++++|.+++..|..
T Consensus 88 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 167 (597)
T 3oja_B 88 EEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTF 167 (597)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTT
T ss_pred CCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhh
Confidence 988888999999999999999999988888889999999999999999977766 689999999999999999887753
Q ss_pred -CCCCccEEEccCCcCCCCCCCCCCCCcccCCCC
Q 006903 189 -DFSNLLQFNVSNNNLSGPVPGVNGRLGADSFSG 221 (626)
Q Consensus 189 -~~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~g 221 (626)
.+++|+.|++++|.+++..+..+..+....+.+
T Consensus 168 ~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~ 201 (597)
T 3oja_B 168 QATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSY 201 (597)
T ss_dssp TTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCS
T ss_pred hcCCcCcEEECcCCCCCCcChhhhhhhhhhhccc
Confidence 588999999999999876444333333333333
No 308
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.56 E-value=7.5e-15 Score=150.88 Aligned_cols=147 Identities=20% Similarity=0.178 Sum_probs=108.8
Q ss_pred CeEEEEEecCCCceeccCccccCCC-----CCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccc--cChhh--h
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKT-----QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGN--LPDSL--S 143 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l-----~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~--ip~~~--~ 143 (626)
.+++.|+|++|++++. | ..+..+ ++|++|+|++|++++..|..++++++|++|+|++|++.|. +|..+ .
T Consensus 121 ~~L~~L~Ls~N~l~~~-~-~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 121 PDLNILNLRNVSWATR-D-AWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp CCCSEEEEESCBCSSS-S-SHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCccEEEccCCCCcch-h-HHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 5688888998888876 4 344444 7888888888888887778888888888888888888776 34555 7
Q ss_pred cCCCCCeEEccCCcCCc--cCCC--ccCcCCCcEEEcCCCcccccCCCC---CCCCccEEEccCCcCCCCCCCCCC-CCc
Q 006903 144 KLNNLKRLDISNNNFSS--ELPD--LSRISGLLTFFAENNQLRGGIPEF---DFSNLLQFNVSNNNLSGPVPGVNG-RLG 215 (626)
Q Consensus 144 ~l~~L~~L~ls~N~l~g--~~p~--~~~~~~L~~l~l~~N~l~g~ip~~---~~~~L~~l~ls~N~l~g~ip~~~~-~~~ 215 (626)
.+++|++|+|++|+|++ .++. +..+++|+.|++++|++++.+|.. .+++|+.|++++|.|+ .+|..+. ++.
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~~~L~ 277 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLPAKLS 277 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCCSEEE
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhccCCce
Confidence 88888888888888884 2332 456788888888888888877532 3578888888888887 7776654 233
Q ss_pred ccCCCCC
Q 006903 216 ADSFSGN 222 (626)
Q Consensus 216 ~~~~~gn 222 (626)
...+.+|
T Consensus 278 ~L~Ls~N 284 (312)
T 1wwl_A 278 VLDLSYN 284 (312)
T ss_dssp EEECCSS
T ss_pred EEECCCC
Confidence 3334444
No 309
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.56 E-value=1.9e-14 Score=155.31 Aligned_cols=148 Identities=24% Similarity=0.251 Sum_probs=116.5
Q ss_pred CCCCcccEEecCCC---------CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEe
Q 006903 59 CSGKWVGVTCDSRQ---------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYV 129 (626)
Q Consensus 59 c~~~w~gv~c~~~~---------~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 129 (626)
|...|..|.|.... ..++.|+|++|++.+..+ ..+..+++|+.|+|++|++++..|..|.++++|++|+|
T Consensus 41 C~~~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L 119 (440)
T 3zyj_A 41 CSNQFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKV-NSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLEL 119 (440)
T ss_dssp ECTTSCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECT-TTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEEC
T ss_pred eCCCCCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCH-HHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEEC
Confidence 44457788886531 457889999999988664 47889999999999999999887788999999999999
Q ss_pred eccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC---CCCCccEEEccCCcCCC
Q 006903 130 GRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF---DFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 130 ~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~---~~~~L~~l~ls~N~l~g 205 (626)
++|+|++..+..|..+++|++|+|++|.++...+. +.++++|+.|++++|+..+.+|.. .+++|+.|++++|+++
T Consensus 120 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~- 198 (440)
T 3zyj_A 120 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR- 198 (440)
T ss_dssp CSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-
T ss_pred CCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-
Confidence 99999866556788999999999999999877664 777888888888876665566653 3667777777777776
Q ss_pred CCC
Q 006903 206 PVP 208 (626)
Q Consensus 206 ~ip 208 (626)
.+|
T Consensus 199 ~~~ 201 (440)
T 3zyj_A 199 EIP 201 (440)
T ss_dssp SCC
T ss_pred ccc
Confidence 344
No 310
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.55 E-value=4.8e-15 Score=166.50 Aligned_cols=150 Identities=18% Similarity=0.115 Sum_probs=130.5
Q ss_pred cccEEecCC---------CCeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccc
Q 006903 63 WVGVTCDSR---------QKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNK 133 (626)
Q Consensus 63 w~gv~c~~~---------~~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~ 133 (626)
+..|.|... ...++.|+|++|++++..| ..+..+++|++|+|++|++.+..|..|.++++|++|+|++|+
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQN-TTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANP 92 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECT-TTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCCh-hHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCc
Confidence 445777543 2468999999999998765 478999999999999999999889999999999999999999
Q ss_pred cccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccc-cCCCC-CCCCccEEEccCCcCCCCCCCC
Q 006903 134 LSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRG-GIPEF-DFSNLLQFNVSNNNLSGPVPGV 210 (626)
Q Consensus 134 l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g-~ip~~-~~~~L~~l~ls~N~l~g~ip~~ 210 (626)
+++..|..|+++++|++|+|++|.+++..|. +.++++|++|++++|++++ .+|.. .+++|+.|++++|.+++..|..
T Consensus 93 l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 172 (606)
T 3t6q_A 93 LIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKED 172 (606)
T ss_dssp CSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHH
T ss_pred ccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhh
Confidence 9999999999999999999999999997554 8999999999999999998 44554 5889999999999999877755
Q ss_pred CCC
Q 006903 211 NGR 213 (626)
Q Consensus 211 ~~~ 213 (626)
++.
T Consensus 173 ~~~ 175 (606)
T 3t6q_A 173 MSS 175 (606)
T ss_dssp HHT
T ss_pred hhh
Confidence 443
No 311
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.55 E-value=2.4e-14 Score=145.58 Aligned_cols=150 Identities=23% Similarity=0.237 Sum_probs=124.1
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|++++..+ ...+++|+.|+|++|+++ .+|..+..+++|++|+|++|+|++..|..|..+++|++|+
T Consensus 55 ~~L~~L~L~~n~l~~~~~---~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~ 130 (290)
T 1p9a_G 55 TRLTQLNLDRAELTKLQV---DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELY 130 (290)
T ss_dssp TTCCEEECTTSCCCEEEC---CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCcccC---CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEE
Confidence 578999999999987543 378899999999999998 6888899999999999999999977778899999999999
Q ss_pred ccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCCC---CcccCCCCCCCCC
Q 006903 153 ISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNGR---LGADSFSGNPGLC 226 (626)
Q Consensus 153 ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~~---~~~~~~~gn~~lc 226 (626)
|++|+|++..|. +..+++|+.|++++|++++..+.. .+++|+.|++++|+|+ .+|..+.. +....+.||+..|
T Consensus 131 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 131 LKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 999999987776 788999999999999999544432 4789999999999998 67765443 2333456777655
Q ss_pred C
Q 006903 227 G 227 (626)
Q Consensus 227 g 227 (626)
.
T Consensus 210 ~ 210 (290)
T 1p9a_G 210 N 210 (290)
T ss_dssp S
T ss_pred c
Confidence 3
No 312
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.55 E-value=1.3e-14 Score=148.59 Aligned_cols=154 Identities=16% Similarity=0.174 Sum_probs=134.3
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeecccccc-ccChhhhcCCCCCeE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSG-NLPDSLSKLNNLKRL 151 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g-~ip~~~~~l~~L~~L 151 (626)
.+++.|+|++|++.+..+...+..+++|+.|+|++|.+.+..|..+.++++|++|+|++|.+++ .+|..+..+++|++|
T Consensus 101 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 180 (306)
T 2z66_A 101 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 180 (306)
T ss_dssp TTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEE
Confidence 5789999999999987654568899999999999999999999999999999999999999997 689999999999999
Q ss_pred EccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCCCCc----ccCCCCCCC
Q 006903 152 DISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNGRLG----ADSFSGNPG 224 (626)
Q Consensus 152 ~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~~~~----~~~~~gn~~ 224 (626)
+|++|++++..|. +..+++|+.|++++|++++..+.. .+++|+.|++++|.+++.+|..+..++ ...+.+|+-
T Consensus 181 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~ 260 (306)
T 2z66_A 181 DLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 260 (306)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCE
T ss_pred ECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCe
Confidence 9999999998886 899999999999999999765532 578999999999999999998766543 345667765
Q ss_pred CC
Q 006903 225 LC 226 (626)
Q Consensus 225 lc 226 (626)
.|
T Consensus 261 ~~ 262 (306)
T 2z66_A 261 AC 262 (306)
T ss_dssp EC
T ss_pred ec
Confidence 44
No 313
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.54 E-value=1e-14 Score=170.33 Aligned_cols=147 Identities=17% Similarity=0.137 Sum_probs=121.9
Q ss_pred CcccEEecCCCCeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccC-CccccCCCCCcEEEeeccccccccCh
Q 006903 62 KWVGVTCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTV-SQEISNCKQLTHLYVGRNKLSGNLPD 140 (626)
Q Consensus 62 ~w~gv~c~~~~~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~-p~~~~~l~~L~~L~l~~N~l~g~ip~ 140 (626)
+|..|.+ ...+++.|+|++|.+++..+ ..+..+++|++|+|++|++.+.+ |..|.++++|++|+|++|++++..|.
T Consensus 15 ~L~~vP~--lp~~l~~LdLs~N~i~~i~~-~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 15 NLTQVPQ--VLNTTERLLLSFNYIRTVTA-SSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CSSCCCS--SCTTCCEEEEESCCCCEECS-SSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCC--CCCCcCEEECCCCcCCccCh-hHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 3666665 23578899999999988765 47888999999999999888777 67789999999999999999988888
Q ss_pred hhhcCCCCCeEEccCCcCCccCCC---ccCcCCCcEEEcCCCcccccCCC---CCCCCccEEEccCCcCCCCCCCCC
Q 006903 141 SLSKLNNLKRLDISNNNFSSELPD---LSRISGLLTFFAENNQLRGGIPE---FDFSNLLQFNVSNNNLSGPVPGVN 211 (626)
Q Consensus 141 ~~~~l~~L~~L~ls~N~l~g~~p~---~~~~~~L~~l~l~~N~l~g~ip~---~~~~~L~~l~ls~N~l~g~ip~~~ 211 (626)
.|+++++|++|+|++|.+++.+|. +.++++|+.|++++|.+++..|. ..+++|+.|++++|.+++..|..+
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l 168 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHEL 168 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGG
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHc
Confidence 999999999999999999987654 88899999999999999887653 258888999999998888877654
No 314
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.54 E-value=1.4e-14 Score=142.68 Aligned_cols=135 Identities=21% Similarity=0.255 Sum_probs=115.6
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCC-CcccCCccccCCCCCcEEEeec-cccccccChhhhcCCCCCe
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENN-IAGTVSQEISNCKQLTHLYVGR-NKLSGNLPDSLSKLNNLKR 150 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~-l~g~~p~~~~~l~~L~~L~l~~-N~l~g~ip~~~~~l~~L~~ 150 (626)
..++.|+|++|++++..+ ..+..+++|+.|+|++|. +++..+..+.++++|++|+|++ |++++..|..|..+++|++
T Consensus 31 ~~l~~L~l~~n~l~~i~~-~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~ 109 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPS-HAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKF 109 (239)
T ss_dssp TTCCEEEEESCCCSEECT-TTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCE
T ss_pred CcccEEEEeCCcceEECH-HHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCE
Confidence 468999999999997654 468899999999999997 8866666899999999999999 9999766678899999999
Q ss_pred EEccCCcCCccCCCccCcCCCc---EEEcCCC-cccccCCC-C-CCCCcc-EEEccCCcCCCCCCCC
Q 006903 151 LDISNNNFSSELPDLSRISGLL---TFFAENN-QLRGGIPE-F-DFSNLL-QFNVSNNNLSGPVPGV 210 (626)
Q Consensus 151 L~ls~N~l~g~~p~~~~~~~L~---~l~l~~N-~l~g~ip~-~-~~~~L~-~l~ls~N~l~g~ip~~ 210 (626)
|+|++|.+++ +|.+..+++|+ .|++++| ++++..+. + .+++|+ .|++++|.++ .+|..
T Consensus 110 L~l~~n~l~~-lp~~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~ 174 (239)
T 2xwt_C 110 LGIFNTGLKM-FPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGY 174 (239)
T ss_dssp EEEEEECCCS-CCCCTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTT
T ss_pred EeCCCCCCcc-ccccccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHh
Confidence 9999999998 67788888888 9999999 88865554 2 578899 9999999998 67654
No 315
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.54 E-value=4.2e-14 Score=134.70 Aligned_cols=124 Identities=23% Similarity=0.284 Sum_probs=107.3
Q ss_pred EEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCC
Q 006903 77 KIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNN 156 (626)
Q Consensus 77 ~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N 156 (626)
.+++++++|.. +|. .+ .++|+.|+|++|+|+ .+|..+.++++|+.|+|++|++++..|..|..+++|++|+|++|
T Consensus 14 ~l~~~~~~l~~-ip~-~~--~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 14 VVRCSNKGLKV-LPK-GI--PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EEECTTSCCSS-CCS-CC--CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEcCCCCCCc-CCC-CC--CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 46788888873 443 22 368999999999998 78899999999999999999999887888999999999999999
Q ss_pred cCCccCCC-ccCcCCCcEEEcCCCcccccCCC-C-CCCCccEEEccCCcCCC
Q 006903 157 NFSSELPD-LSRISGLLTFFAENNQLRGGIPE-F-DFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 157 ~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~-~-~~~~L~~l~ls~N~l~g 205 (626)
+|++..|. +..+++|+.|++++|++++..+. + .+++|+.|++++|.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 99998886 99999999999999999965553 2 47899999999998864
No 316
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.54 E-value=3.7e-15 Score=153.21 Aligned_cols=136 Identities=16% Similarity=0.204 Sum_probs=115.7
Q ss_pred CeEEEEEecCCCceeccCcccc-CCCCCccEEEcccCCCcccCCccccCC-----CCCcEEEeeccccccccChhhhcCC
Q 006903 73 KSVRKIVLDGFNLSGILDTTSV-CKTQSLVVLSLEENNIAGTVSQEISNC-----KQLTHLYVGRNKLSGNLPDSLSKLN 146 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~-~~l~~L~~L~ls~N~l~g~~p~~~~~l-----~~L~~L~l~~N~l~g~ip~~~~~l~ 146 (626)
.+++.|+|++|+++|.+|...+ ..+++|+.|+|++|++++. |..++.+ ++|++|+|++|++++..|..+++++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 5789999999999998876322 7899999999999999987 8888777 8999999999999988889999999
Q ss_pred CCCeEEccCCcCCccC--C-Cc--cCcCCCcEEEcCCCcccc--cCCCC---CCCCccEEEccCCcCCCCCCC
Q 006903 147 NLKRLDISNNNFSSEL--P-DL--SRISGLLTFFAENNQLRG--GIPEF---DFSNLLQFNVSNNNLSGPVPG 209 (626)
Q Consensus 147 ~L~~L~ls~N~l~g~~--p-~~--~~~~~L~~l~l~~N~l~g--~ip~~---~~~~L~~l~ls~N~l~g~ip~ 209 (626)
+|++|||++|+++|.+ | .+ ..+++|+.|++++|++++ .++.. .+++|+.|++++|.+++.+|.
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 246 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGA 246 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCC
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccch
Confidence 9999999999998863 2 34 889999999999999984 33322 468999999999999998763
No 317
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.54 E-value=1.3e-14 Score=162.81 Aligned_cols=142 Identities=15% Similarity=0.151 Sum_probs=109.6
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCcc-ccCCCCCcEEEeeccccccccChhhhcCCCCCeE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQE-ISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRL 151 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~-~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L 151 (626)
.+++.|+|++|.+.+..+ ..+..+++|+.|+|++|.+.+..|.. +.++++|+.|+|++|.+++..|..+..+++|++|
T Consensus 376 ~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 454 (606)
T 3t6q_A 376 SHLQSLNLSYNEPLSLKT-EAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHL 454 (606)
T ss_dssp TTCCEEECCSCSCEEECT-TTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEE
T ss_pred CCCCEEECCCCcCCcCCH-HHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEE
Confidence 567888888888887665 36777888888888888888776654 7788888888888888888778888888888888
Q ss_pred EccCCcCCcc-CC--C-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCCCCc
Q 006903 152 DISNNNFSSE-LP--D-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNGRLG 215 (626)
Q Consensus 152 ~ls~N~l~g~-~p--~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~~~~ 215 (626)
+|++|++++. +| . +..+++|+.|++++|++++.+|.. .+++|+.|++++|++++.+|..+..+.
T Consensus 455 ~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~ 524 (606)
T 3t6q_A 455 NLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLK 524 (606)
T ss_dssp ECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCC
T ss_pred ECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccc
Confidence 8888888763 22 2 777888888888888888777653 577888888888888887776655433
No 318
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.54 E-value=1.4e-14 Score=138.37 Aligned_cols=130 Identities=13% Similarity=0.235 Sum_probs=113.2
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|.+... +.+..+++|+.|+|++|.+++..|..++.+++|++|+|++|++++..|..++.+++|+.|+
T Consensus 66 ~~L~~L~l~~n~~~~~---~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~ 142 (197)
T 4ezg_A 66 HNIKDLTINNIHATNY---NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSID 142 (197)
T ss_dssp TTCSEEEEESCCCSCC---GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEE
T ss_pred CCCCEEEccCCCCCcc---hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEE
Confidence 4689999999976532 3688899999999999999998899999999999999999999998999999999999999
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g 205 (626)
|++|.+.+.+|.+..+++|+.|++++|++++..+-..+++|+.|++++|++.+
T Consensus 143 L~~n~~i~~~~~l~~l~~L~~L~l~~n~i~~~~~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 143 LSYNGAITDIMPLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCSCTBCCCCGGGGGCSSCCEEECTTBCCCCCTTGGGCSSCCEEEECBC----
T ss_pred ccCCCCccccHhhcCCCCCCEEECCCCCCcChHHhccCCCCCEEEeeCcccCC
Confidence 99999666678899999999999999999974433468999999999999864
No 319
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.53 E-value=1.3e-14 Score=153.73 Aligned_cols=134 Identities=17% Similarity=0.203 Sum_probs=115.3
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
..++.|+++++.+.. +|+..+..+++|+.|+|++|.+++..|..+.++++|++|+|++|++++..|..++++++|++|+
T Consensus 45 ~~l~~l~l~~~~l~~-l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRK-LPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp CCCSEEEEESCEESE-ECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEecCCchhh-CChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 457788999888775 4444567889999999999999987778899999999999999999988888899999999999
Q ss_pred ccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCC
Q 006903 153 ISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPV 207 (626)
Q Consensus 153 ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~i 207 (626)
|++|.++...+. +.++++|++|++++|.+++..|.. .+++|+.|++++|.+++.-
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 181 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD 181 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc
Confidence 999999966555 688999999999999999877653 5889999999999998653
No 320
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.53 E-value=1.8e-14 Score=164.15 Aligned_cols=136 Identities=18% Similarity=0.179 Sum_probs=111.5
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|++++..+ ..+..+++|++|+|++|.+++..|..++++++|++|+|++|++++..+..|+++++|++|+
T Consensus 25 ~~l~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPA-ANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp TTCSEEECCSSCCCCCCG-GGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCcEEECCCCCCCCcCH-HHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 468889999999887543 4678888899999999999888888888899999999999988854444688889999999
Q ss_pred ccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCC
Q 006903 153 ISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPG 209 (626)
Q Consensus 153 ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~ 209 (626)
|++|++++..|. +.++++|++|++++|.+++..|.. .+++|+.|++++|.+++..|.
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 163 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSE 163 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHH
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHH
Confidence 999998877765 888888999999999888877653 577888888888888876664
No 321
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.52 E-value=2.1e-14 Score=158.24 Aligned_cols=135 Identities=19% Similarity=0.296 Sum_probs=109.5
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeecccccc--ccChhhhcCCCCCeE
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSG--NLPDSLSKLNNLKRL 151 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g--~ip~~~~~l~~L~~L 151 (626)
+++.|++++|++.+.. ....+++|+.|+|++|.+++.+|..++++++|++|+|++|++++ .+|..+..+++|++|
T Consensus 303 ~L~~L~l~~n~l~~~~---~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L 379 (520)
T 2z7x_B 303 NIKNFTVSGTRMVHML---CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQL 379 (520)
T ss_dssp CCSEEEEESSCCCCCC---CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEE
T ss_pred ceeEEEcCCCcccccc---chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEE
Confidence 5788888888876532 12577888899999999998888888889999999999999886 677788889999999
Q ss_pred EccCCcCCccCCC--ccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCCCCCCCC
Q 006903 152 DISNNNFSSELPD--LSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPGVNG 212 (626)
Q Consensus 152 ~ls~N~l~g~~p~--~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ip~~~~ 212 (626)
||++|.+++.+|. +..+++|+.|++++|++++.+|....++|+.|++++|+++ .+|..+.
T Consensus 380 ~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~-~ip~~~~ 441 (520)
T 2z7x_B 380 DISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIK-SIPKQVV 441 (520)
T ss_dssp ECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCCTTCCEEECCSSCCC-CCCGGGG
T ss_pred ECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhcccCCEEECCCCccc-ccchhhh
Confidence 9999999886663 7778888999999998888877654478888888888888 7776543
No 322
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.52 E-value=2.4e-14 Score=159.28 Aligned_cols=153 Identities=20% Similarity=0.244 Sum_probs=130.7
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCC-ccccCCCCCcEEEeeccccccccChhhhcCCCCCeE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVS-QEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRL 151 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L 151 (626)
.+++.|+|++|.+.+..+ .+..+++|+.|+|++|.+.+..| ..+.++++|++|+|++|.+++.+|..+.++++|+.|
T Consensus 373 ~~L~~L~l~~n~l~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 450 (570)
T 2z63_A 373 TSLKYLDLSFNGVITMSS--NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 450 (570)
T ss_dssp SCCCEEECCSCSEEEEEE--EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred CccCEEECCCCccccccc--cccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEE
Confidence 578999999999988653 38889999999999999998777 568899999999999999999999999999999999
Q ss_pred EccCCcCC-ccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCCCC---cccCCCCCCC
Q 006903 152 DISNNNFS-SELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNGRL---GADSFSGNPG 224 (626)
Q Consensus 152 ~ls~N~l~-g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~~~---~~~~~~gn~~ 224 (626)
+|++|.++ +.+|. +..+++|+.|++++|++++.+|.. .+++|+.|++++|++++.+|..+..+ ....+.+|+-
T Consensus 451 ~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~ 530 (570)
T 2z63_A 451 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPW 530 (570)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred ECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcc
Confidence 99999998 67776 899999999999999999887764 58899999999999999888766543 3345667765
Q ss_pred CCC
Q 006903 225 LCG 227 (626)
Q Consensus 225 lcg 227 (626)
.|.
T Consensus 531 ~~~ 533 (570)
T 2z63_A 531 DCS 533 (570)
T ss_dssp CCC
T ss_pred cCC
Confidence 553
No 323
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.51 E-value=4e-14 Score=134.81 Aligned_cols=125 Identities=23% Similarity=0.360 Sum_probs=109.3
Q ss_pred CCCCCcccEEecCCC---------CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEE
Q 006903 58 PCSGKWVGVTCDSRQ---------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLY 128 (626)
Q Consensus 58 ~c~~~w~gv~c~~~~---------~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 128 (626)
.|...|..|.|..+. ..++.|+|++|+++ .+| ..+..+++|+.|+|++|+|++..|..|.++++|++|+
T Consensus 7 ~C~C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip-~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ 84 (193)
T 2wfh_A 7 ECTCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVP-KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLI 84 (193)
T ss_dssp TCEEETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCC-GGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCEeCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhH-HHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEE
Confidence 343357778886532 46899999999998 565 4789999999999999999998888899999999999
Q ss_pred eeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCccccc
Q 006903 129 VGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGG 184 (626)
Q Consensus 129 l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ 184 (626)
|++|+|++..|..|..+++|+.|+|++|+|++..+. +..+++|+.|++++|.+...
T Consensus 85 Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 85 LSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 999999988888899999999999999999987775 88999999999999999864
No 324
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.51 E-value=7.8e-15 Score=160.31 Aligned_cols=146 Identities=21% Similarity=0.244 Sum_probs=123.9
Q ss_pred CcccEEecCCCCeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCcccc-CCCCCcEEEeeccccccccCh
Q 006903 62 KWVGVTCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEIS-NCKQLTHLYVGRNKLSGNLPD 140 (626)
Q Consensus 62 ~w~gv~c~~~~~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~g~ip~ 140 (626)
.+.++.|.. ...++.|+|++|+|++..|. .++.+++|+.|+|++|.+++.+|..+. ++++|+.|+|++|.|++..+
T Consensus 110 ~l~~~~~~~-l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~- 186 (487)
T 3oja_A 110 NISRVSCSR-GQGKKNIYLANNKITMLRDL-DEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG- 186 (487)
T ss_dssp CCCCEEECC-CSSCEEEECCSSCCCSGGGB-CGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC-
T ss_pred cCCCCCccc-cCCCCEEECCCCCCCCCCch-hhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccc-
Confidence 355666643 35789999999999987764 678899999999999999999998886 89999999999999997633
Q ss_pred hhhcCCCCCeEEccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCC-CCCCCCCC
Q 006903 141 SLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLS-GPVPGVNG 212 (626)
Q Consensus 141 ~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~-g~ip~~~~ 212 (626)
+..+++|+.|||++|.|++.+|.+..+++|+.|++++|.+++ +|.. .+++|+.|++++|.++ +.+|..+.
T Consensus 187 -~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~ 259 (487)
T 3oja_A 187 -QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (487)
T ss_dssp -CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHT
T ss_pred -cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHH
Confidence 446999999999999999988889999999999999999997 5543 4789999999999997 66665443
No 325
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.50 E-value=5e-14 Score=156.84 Aligned_cols=134 Identities=19% Similarity=0.267 Sum_probs=86.4
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeecccccc--ccChhhhcCCCCCeE
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSG--NLPDSLSKLNNLKRL 151 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g--~ip~~~~~l~~L~~L 151 (626)
+++.|++++|++.... ....+++|+.|+|++|.+++.+|..++++++|++|+|++|++++ .+|..+.++++|++|
T Consensus 332 ~L~~L~l~~n~~~~~~---~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L 408 (562)
T 3a79_B 332 NIKMLSISDTPFIHMV---CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETL 408 (562)
T ss_dssp CCSEEEEESSCCCCCC---CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEE
T ss_pred cceEEEccCCCccccc---CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEE
Confidence 3666777777664321 11456667777777777777667777777777777777777765 344556677777777
Q ss_pred EccCCcCCccCCC--ccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCCCCCCC
Q 006903 152 DISNNNFSSELPD--LSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPGVN 211 (626)
Q Consensus 152 ~ls~N~l~g~~p~--~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ip~~~ 211 (626)
+|++|++++.+|. +..+++|+.|++++|++++.+|....++|+.|++++|+++ .||..+
T Consensus 409 ~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~-~ip~~~ 469 (562)
T 3a79_B 409 DVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIM-SIPKDV 469 (562)
T ss_dssp ECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCCTTCSEEECCSSCCC-CCCTTT
T ss_pred ECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhcCcCCEEECCCCcCc-ccChhh
Confidence 7777777765553 5666677777777777766666533356777777777666 555544
No 326
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.50 E-value=6.3e-14 Score=156.02 Aligned_cols=93 Identities=22% Similarity=0.192 Sum_probs=50.8
Q ss_pred cCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccC--CC-ccCcCCCcEEEcCCCcccccCCCC---CCCC
Q 006903 119 SNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSEL--PD-LSRISGLLTFFAENNQLRGGIPEF---DFSN 192 (626)
Q Consensus 119 ~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~--p~-~~~~~~L~~l~l~~N~l~g~ip~~---~~~~ 192 (626)
..+++|++|+|++|++++.+|..++++++|+.|+|++|++++.. |. +..+++|+.|++++|++++.+|.. .+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 44555555555555555555555555555555555555555422 22 455555555555555555545542 2455
Q ss_pred ccEEEccCCcCCCCCCCCC
Q 006903 193 LLQFNVSNNNLSGPVPGVN 211 (626)
Q Consensus 193 L~~l~ls~N~l~g~ip~~~ 211 (626)
|+.|++++|.++|.+|..+
T Consensus 430 L~~L~l~~n~l~~~~~~~l 448 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCL 448 (562)
T ss_dssp CCEEECCSSCCCGGGGSSC
T ss_pred CCEEECCCCCCCcchhhhh
Confidence 5555555555555555443
No 327
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.50 E-value=1.2e-13 Score=142.96 Aligned_cols=144 Identities=22% Similarity=0.294 Sum_probs=116.4
Q ss_pred CcccEEecCCC---------CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeecc
Q 006903 62 KWVGVTCDSRQ---------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRN 132 (626)
Q Consensus 62 ~w~gv~c~~~~---------~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N 132 (626)
.|..+.|.... ..++.|+|++|++.+..+ ..+..+++|+.|+|++|++++..|..+.++++|++|+|++|
T Consensus 34 ~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 34 HLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRK-DDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp ETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECT-TTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred cCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCH-hHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 68888886432 368899999999987654 46889999999999999999888889999999999999999
Q ss_pred ccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccc--cCCCC-CCCCccEEEccCCcCCCCCC
Q 006903 133 KLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRG--GIPEF-DFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 133 ~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g--~ip~~-~~~~L~~l~ls~N~l~g~ip 208 (626)
+++ .+|..+. ++|++|+|++|.+++..+. +..+++|+.|++++|.++. ..|.. ...+|+.|++++|.+++ +|
T Consensus 113 ~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~-l~ 188 (332)
T 2ft3_A 113 HLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTG-IP 188 (332)
T ss_dssp CCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSS-CC
T ss_pred cCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCc-cC
Confidence 998 6787665 8899999999999877665 8889999999999999863 44432 11278888888888876 55
Q ss_pred CC
Q 006903 209 GV 210 (626)
Q Consensus 209 ~~ 210 (626)
..
T Consensus 189 ~~ 190 (332)
T 2ft3_A 189 KD 190 (332)
T ss_dssp SS
T ss_pred cc
Confidence 43
No 328
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.50 E-value=1.1e-13 Score=143.21 Aligned_cols=147 Identities=18% Similarity=0.312 Sum_probs=115.0
Q ss_pred CCCCCcccEEecCC---------CCeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEE
Q 006903 58 PCSGKWVGVTCDSR---------QKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLY 128 (626)
Q Consensus 58 ~c~~~w~gv~c~~~---------~~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 128 (626)
.|...|..+.|... ...++.|+|++|++++..+ ..+..+++|++|+|++|++++..|..+.++++|++|+
T Consensus 28 ~c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (330)
T 1xku_A 28 RCQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKD-GDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLY 106 (330)
T ss_dssp TCEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCT-TTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred CCcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeCh-hhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEE
Confidence 34336888998643 1467889999999997654 4688999999999999999998899999999999999
Q ss_pred eeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccc--cCCCC--CCCCccEEEccCCcC
Q 006903 129 VGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRG--GIPEF--DFSNLLQFNVSNNNL 203 (626)
Q Consensus 129 l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g--~ip~~--~~~~L~~l~ls~N~l 203 (626)
|++|+++ .+|..+. ++|+.|++++|.+++..+. +..+++|+.|++++|.++. ..|.. .+++|+.|++++|.+
T Consensus 107 Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l 183 (330)
T 1xku_A 107 LSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI 183 (330)
T ss_dssp CCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCC
T ss_pred CCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcc
Confidence 9999998 6776654 7888888888888876665 7778888888888888853 33432 467788888888887
Q ss_pred CCCCCC
Q 006903 204 SGPVPG 209 (626)
Q Consensus 204 ~g~ip~ 209 (626)
+. +|.
T Consensus 184 ~~-l~~ 188 (330)
T 1xku_A 184 TT-IPQ 188 (330)
T ss_dssp CS-CCS
T ss_pred cc-CCc
Confidence 64 443
No 329
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.50 E-value=4e-15 Score=170.22 Aligned_cols=138 Identities=22% Similarity=0.259 Sum_probs=118.7
Q ss_pred CCeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeE
Q 006903 72 QKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRL 151 (626)
Q Consensus 72 ~~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L 151 (626)
...++.|+|++|.+. .+|. .++.+++|+.|+|++|.|+ .+|..|++|++|++|+|++|+|+ .||..|+.|++|++|
T Consensus 223 l~~L~~L~Ls~n~l~-~l~~-~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L 298 (727)
T 4b8c_D 223 DQLWHALDLSNLQIF-NISA-NIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYF 298 (727)
T ss_dssp CCCCCEEECTTSCCS-CCCG-GGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEE
T ss_pred CCCCcEEECCCCCCC-CCCh-hhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEE
Confidence 357899999999998 5654 6779999999999999999 89999999999999999999999 899999999999999
Q ss_pred EccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCCC--C-CCccEEEccCCcCCCCCCCCCCCC
Q 006903 152 DISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEFD--F-SNLLQFNVSNNNLSGPVPGVNGRL 214 (626)
Q Consensus 152 ~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~~--~-~~L~~l~ls~N~l~g~ip~~~~~~ 214 (626)
+|++|.|+ .+|. ++.+++|+.|+|++|.|+|.+|... + ..+..+++++|.++|.+|..+..+
T Consensus 299 ~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~~l 364 (727)
T 4b8c_D 299 YFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERRFI 364 (727)
T ss_dssp ECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----
T ss_pred ECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcccccee
Confidence 99999998 5565 9999999999999999999988642 1 122347899999999999876543
No 330
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.50 E-value=1.1e-13 Score=149.92 Aligned_cols=138 Identities=20% Similarity=0.189 Sum_probs=99.0
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChh-----------
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDS----------- 141 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~----------- 141 (626)
.+++.|+|++|++++..+ ..+..+++|+.|+|++|++++..+..+.++++|++|+|++|++++..+..
T Consensus 99 ~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 177 (452)
T 3zyi_A 99 HHLEVLQLGRNSIRQIEV-GAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLD 177 (452)
T ss_dssp TTCCEEECCSSCCCEECT-TTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCCcCh-hhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEe
Confidence 468888888888887654 46778888888888888888766666788888888888888877433323
Q ss_pred --------------hhcCCCCCeEEccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCC
Q 006903 142 --------------LSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 142 --------------~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g 205 (626)
+.++++|++|+|++|++++ +|.+..+++|+.|++++|++++..|.. .+++|+.|++++|++++
T Consensus 178 l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 256 (452)
T 3zyi_A 178 LGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSL 256 (452)
T ss_dssp CCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CCCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCE
T ss_pred CCCCCCccccChhhccCCCCCCEEECCCCcccc-cccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCce
Confidence 4455666666666666664 355666777777777777777766643 46778888888888877
Q ss_pred CCCCCCC
Q 006903 206 PVPGVNG 212 (626)
Q Consensus 206 ~ip~~~~ 212 (626)
..|..+.
T Consensus 257 ~~~~~~~ 263 (452)
T 3zyi_A 257 IERNAFD 263 (452)
T ss_dssp ECTTTTT
T ss_pred ECHHHhc
Confidence 7666554
No 331
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.49 E-value=6.9e-14 Score=157.32 Aligned_cols=155 Identities=16% Similarity=0.177 Sum_probs=132.6
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeecccc-ccccChhhhcCCCCCeE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKL-SGNLPDSLSKLNNLKRL 151 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l-~g~ip~~~~~l~~L~~L 151 (626)
..++.+++..+++.+..+...+..+.+|+.++++.|.+.+..|..+..++.|+.|+|++|++ .+.+|..+..+++|++|
T Consensus 420 ~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L 499 (635)
T 4g8a_A 420 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 499 (635)
T ss_dssp TTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred ccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEE
Confidence 34666777777777766666677889999999999999999999999999999999999985 45678889999999999
Q ss_pred EccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCCCCC----cccCCCCCCC
Q 006903 152 DISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVNGRL----GADSFSGNPG 224 (626)
Q Consensus 152 ~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~~~----~~~~~~gn~~ 224 (626)
||++|+|++.+|. +..+++|+.|++++|++++..|.. .+++|+.|++++|+|++.+|..+..+ ....+.+||.
T Consensus 500 ~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~ 579 (635)
T 4g8a_A 500 DLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 579 (635)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCB
T ss_pred ECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCC
Confidence 9999999999887 899999999999999999877753 58899999999999999999887554 3346778887
Q ss_pred CCC
Q 006903 225 LCG 227 (626)
Q Consensus 225 lcg 227 (626)
.|.
T Consensus 580 ~C~ 582 (635)
T 4g8a_A 580 ACT 582 (635)
T ss_dssp CCS
T ss_pred ccc
Confidence 774
No 332
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.49 E-value=3.6e-14 Score=156.31 Aligned_cols=135 Identities=18% Similarity=0.198 Sum_probs=88.1
Q ss_pred eEEEEEecCCCceeccCcccc-----CCCCCccEEEcccCCCcccCCc-c-------------------------ccCCC
Q 006903 74 SVRKIVLDGFNLSGILDTTSV-----CKTQSLVVLSLEENNIAGTVSQ-E-------------------------ISNCK 122 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~-----~~l~~L~~L~ls~N~l~g~~p~-~-------------------------~~~l~ 122 (626)
+++.|+|++|.++|.+|. .+ ..+++|+.+++++|.+ .+|. . +..++
T Consensus 248 ~L~~L~l~~n~l~~~~p~-~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~ 324 (520)
T 2z7x_B 248 TVWYFSISNVKLQGQLDF-RDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKIS 324 (520)
T ss_dssp SCSEEEEEEEEEESCCCC-CCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCC
T ss_pred cccEEEeecccccCcccc-chhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhCC
Confidence 456666666666666654 33 4555555555555555 2331 0 15667
Q ss_pred CCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCc--cCCC-ccCcCCCcEEEcCCCcccccCCCC---CCCCccEE
Q 006903 123 QLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSS--ELPD-LSRISGLLTFFAENNQLRGGIPEF---DFSNLLQF 196 (626)
Q Consensus 123 ~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g--~~p~-~~~~~~L~~l~l~~N~l~g~ip~~---~~~~L~~l 196 (626)
+|++|+|++|++++.+|..++++++|++|+|++|++++ .+|. +..+++|+.|++++|++++.+|.. .+++|+.|
T Consensus 325 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L 404 (520)
T 2z7x_B 325 PFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSL 404 (520)
T ss_dssp CCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEE
T ss_pred cccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEE
Confidence 77777777777777777777777777777777777776 4444 667777777777777777766643 35677777
Q ss_pred EccCCcCCCCCCCCC
Q 006903 197 NVSNNNLSGPVPGVN 211 (626)
Q Consensus 197 ~ls~N~l~g~ip~~~ 211 (626)
++++|.+++.+|..+
T Consensus 405 ~Ls~N~l~~~~~~~l 419 (520)
T 2z7x_B 405 NMSSNILTDTIFRCL 419 (520)
T ss_dssp ECCSSCCCGGGGGSC
T ss_pred ECcCCCCCcchhhhh
Confidence 777777777666554
No 333
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.49 E-value=5e-14 Score=156.35 Aligned_cols=105 Identities=23% Similarity=0.356 Sum_probs=55.8
Q ss_pred ccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCCccCcCCCcEEEcCCC
Q 006903 100 LVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENN 179 (626)
Q Consensus 100 L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~l~~N 179 (626)
|+.|+|++|+|++ +|. ++++++|+.|+|++|+|+ .+|..++++++|+.|+|++|+|++ +|.++.+++|+.|++++|
T Consensus 443 L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp~l~~l~~L~~L~Ls~N 518 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VDGVANLPRLQELLLCNN 518 (567)
T ss_dssp CSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CGGGTTCSSCCEEECCSS
T ss_pred ceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-CcccCCCCCCcEEECCCC
Confidence 4555555555554 443 555555555555555555 455555555555555555555554 345555555555555555
Q ss_pred cccccC-CCC--CCCCccEEEccCCcCCCCCC
Q 006903 180 QLRGGI-PEF--DFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 180 ~l~g~i-p~~--~~~~L~~l~ls~N~l~g~ip 208 (626)
++++.+ |.. .+++|+.|++++|.|++.+|
T Consensus 519 ~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 519 RLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 555543 332 35555555555555555444
No 334
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.49 E-value=6.3e-14 Score=155.97 Aligned_cols=149 Identities=23% Similarity=0.221 Sum_probs=125.9
Q ss_pred CeEEEEEecCCCceeccC-ccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccC-hhhhcCCCCCe
Q 006903 73 KSVRKIVLDGFNLSGILD-TTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLP-DSLSKLNNLKR 150 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~-~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip-~~~~~l~~L~~ 150 (626)
.+++.|+|++|++++... +..+..+++|+.|+|++|.+.+. |..+..+++|+.|+|++|.+++..| ..+..+++|++
T Consensus 347 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 425 (570)
T 2z63_A 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITM-SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 425 (570)
T ss_dssp TTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEE-EEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCE
T ss_pred CCCCEEeCcCCccCccccccccccccCccCEEECCCCccccc-cccccccCCCCEEEccCCccccccchhhhhcCCCCCE
Confidence 578999999999987531 23577899999999999999975 4459999999999999999998777 46899999999
Q ss_pred EEccCCcCCccCCC-ccCcCCCcEEEcCCCccc-ccCCCC--CCCCccEEEccCCcCCCCCCCCCCCCc---ccCCCCC
Q 006903 151 LDISNNNFSSELPD-LSRISGLLTFFAENNQLR-GGIPEF--DFSNLLQFNVSNNNLSGPVPGVNGRLG---ADSFSGN 222 (626)
Q Consensus 151 L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~-g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~~~~~---~~~~~gn 222 (626)
|+|++|.+++.+|. +..+++|+.|++++|.++ +.+|.. .+++|+.|++++|.+++.+|..+..++ ...+.+|
T Consensus 426 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 504 (570)
T 2z63_A 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASN 504 (570)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCC
Confidence 99999999998887 889999999999999998 678864 588999999999999998887765433 3344455
No 335
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.49 E-value=1.8e-14 Score=147.85 Aligned_cols=138 Identities=15% Similarity=0.153 Sum_probs=109.8
Q ss_pred eEEEEEecCCCceeccCcccc--CCCCCccEEEcccCCCcccCC----ccccCCCCCcEEEeeccccccccChhhhcCCC
Q 006903 74 SVRKIVLDGFNLSGILDTTSV--CKTQSLVVLSLEENNIAGTVS----QEISNCKQLTHLYVGRNKLSGNLPDSLSKLNN 147 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~--~~l~~L~~L~ls~N~l~g~~p----~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~ 147 (626)
+++.|+|++|++.|.+|. .+ ..+++|+.|+|++|.+++.+| ..+..+++|++|+|++|++++..|..++.+++
T Consensus 92 ~L~~L~l~~n~l~~~~~~-~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPP-LPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp CCCEEEEESCCCBSCCCC-CSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred ceeEEEeeCCEeccchhh-hhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 488899999999988875 44 788899999999999998766 34567889999999999998888888889999
Q ss_pred CCeEEccCCcCCcc---CCC--ccCcCCCcEEEcCCCcccccCCC------CCCCCccEEEccCCcCCCCCCCCCCC
Q 006903 148 LKRLDISNNNFSSE---LPD--LSRISGLLTFFAENNQLRGGIPE------FDFSNLLQFNVSNNNLSGPVPGVNGR 213 (626)
Q Consensus 148 L~~L~ls~N~l~g~---~p~--~~~~~~L~~l~l~~N~l~g~ip~------~~~~~L~~l~ls~N~l~g~ip~~~~~ 213 (626)
|++|||++|++++. .+. +..+++|++|++++|+++. +|. ..+++|+.|++++|.+++.+|..++.
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 246 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPR 246 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSS
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHh
Confidence 99999999998763 222 4678889999999998863 222 14688899999999998887766543
No 336
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.47 E-value=1.7e-13 Score=147.74 Aligned_cols=138 Identities=20% Similarity=0.260 Sum_probs=109.6
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|++++..+ ..+..+++|+.|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|+.|+
T Consensus 88 ~~L~~L~Ls~n~i~~i~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 166 (440)
T 3zyj_A 88 RHLEILQLSRNHIRTIEI-GAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLD 166 (440)
T ss_dssp SSCCEEECCSSCCCEECG-GGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCccCh-hhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeC
Confidence 578999999999987554 4788899999999999999976666789999999999999999876666788888888888
Q ss_pred ccCCcCCccCCC--ccCcCCCcEEEcCCCcccccCCCC-CCCCccEEEccCCcCCCCCCCCCC
Q 006903 153 ISNNNFSSELPD--LSRISGLLTFFAENNQLRGGIPEF-DFSNLLQFNVSNNNLSGPVPGVNG 212 (626)
Q Consensus 153 ls~N~l~g~~p~--~~~~~~L~~l~l~~N~l~g~ip~~-~~~~L~~l~ls~N~l~g~ip~~~~ 212 (626)
|++|+..+.+|. +..+++|+.|++++|+++ .+|.. .+++|+.|++++|.+++..|..+.
T Consensus 167 l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 228 (440)
T 3zyj_A 167 LGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPNLTPLIKLDELDLSGNHLSAIRPGSFQ 228 (440)
T ss_dssp CCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCCCTTCSSCCEEECTTSCCCEECTTTTT
T ss_pred CCCCCCcceeCcchhhcccccCeecCCCCcCc-cccccCCCcccCEEECCCCccCccChhhhc
Confidence 888665555553 777888888888888887 45543 467788888888888777666554
No 337
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.47 E-value=1.4e-13 Score=154.41 Aligned_cols=131 Identities=24% Similarity=0.211 Sum_probs=116.7
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|.+++..+ ..++.+++|+.|+|++|.+++..|..|+++++|++|+|++|.|++..|..|+++++|++|+
T Consensus 75 ~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDT-YAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 153 (597)
T ss_dssp CCCSEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCCCCh-HHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEE
Confidence 468999999999998765 4789999999999999999998888899999999999999999965445579999999999
Q ss_pred ccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCC
Q 006903 153 ISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 153 ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g 205 (626)
|++|.|++.+|. +..+++|+.|++++|.+++. |...+++|+.|++++|.+++
T Consensus 154 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~l~~L~~L~l~~n~l~~ 206 (597)
T 3oja_B 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-DLSLIPSLFHANVSYNLLST 206 (597)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC-CGGGCTTCSEEECCSSCCSE
T ss_pred eeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc-ChhhhhhhhhhhcccCcccc
Confidence 999999999886 99999999999999999974 55568888889998888876
No 338
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.46 E-value=9.5e-14 Score=142.95 Aligned_cols=112 Identities=18% Similarity=0.119 Sum_probs=71.3
Q ss_pred CCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhh-cCCCCCeEEccCCcCCccCCCccCcCCCcEEE
Q 006903 97 TQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLS-KLNNLKRLDISNNNFSSELPDLSRISGLLTFF 175 (626)
Q Consensus 97 l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~-~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~ 175 (626)
+++|+.|+|++|++++..|..+..+++|++|+|++|.+++..|..+. .+++|++|+|++|.+++. |....+++|+.|+
T Consensus 119 ~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~l~~L~~L~ 197 (317)
T 3o53_A 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQVVFAKLKTLD 197 (317)
T ss_dssp CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCCCCTTCCEEE
T ss_pred cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-ccccccccCCEEE
Confidence 45666677777777665566666667777777777777666555553 566777777777776655 3334466677777
Q ss_pred cCCCcccccCCCC-CCCCccEEEccCCcCCCCCCCC
Q 006903 176 AENNQLRGGIPEF-DFSNLLQFNVSNNNLSGPVPGV 210 (626)
Q Consensus 176 l~~N~l~g~ip~~-~~~~L~~l~ls~N~l~g~ip~~ 210 (626)
+++|++++..|.+ .+++|+.|++++|.++ .+|..
T Consensus 198 Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~-~l~~~ 232 (317)
T 3o53_A 198 LSSNKLAFMGPEFQSAAGVTWISLRNNKLV-LIEKA 232 (317)
T ss_dssp CCSSCCCEECGGGGGGTTCSEEECTTSCCC-EECTT
T ss_pred CCCCcCCcchhhhcccCcccEEECcCCccc-chhhH
Confidence 7777776544433 3566777777777766 34544
No 339
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.46 E-value=1.4e-13 Score=128.95 Aligned_cols=130 Identities=25% Similarity=0.354 Sum_probs=111.8
Q ss_pred CCCCCCcccEEecCCC---------CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEE
Q 006903 57 DPCSGKWVGVTCDSRQ---------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHL 127 (626)
Q Consensus 57 ~~c~~~w~gv~c~~~~---------~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 127 (626)
+.|+.+|.+|.|.... ..++.|+|++|++++.. +..+..+++|+.|+|++|++++..+..+.++++|++|
T Consensus 3 ~~C~C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 81 (177)
T 2o6r_A 3 SRCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLP-HGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTIL 81 (177)
T ss_dssp TTCEEETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCC-TTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCEeCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeC-HHHhcCcccccEEECCCCcceEeChhHccCCCccCEE
Confidence 3455479999997542 46899999999998654 4467889999999999999997666678999999999
Q ss_pred EeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCC
Q 006903 128 YVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPE 187 (626)
Q Consensus 128 ~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~ 187 (626)
+|++|+|++..|..+..+++|++|+|++|+|++..+. +..+++|+.|++++|.+++..|.
T Consensus 82 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 82 YLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred ECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 9999999987777789999999999999999987776 68899999999999999987763
No 340
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.46 E-value=1.2e-13 Score=150.47 Aligned_cols=140 Identities=19% Similarity=0.163 Sum_probs=122.2
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|.+++..| ..+..+++|+.|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|+.|+
T Consensus 56 ~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 134 (477)
T 2id5_A 56 PHLEELELNENIVSAVEP-GAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLE 134 (477)
T ss_dssp TTCCEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCEeCh-hhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEE
Confidence 579999999999998765 4788999999999999999976566789999999999999999999899999999999999
Q ss_pred ccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCC--CCCCCccEEEccCCcCCCCCCCCCCC
Q 006903 153 ISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPE--FDFSNLLQFNVSNNNLSGPVPGVNGR 213 (626)
Q Consensus 153 ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~--~~~~~L~~l~ls~N~l~g~ip~~~~~ 213 (626)
|++|.+++..|. +..+++|+.|++++|++++..+. ..+++|+.|++++|.+++..+..+..
T Consensus 135 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~ 198 (477)
T 2id5_A 135 VGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKR 198 (477)
T ss_dssp ECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCS
T ss_pred CCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhccc
Confidence 999999998886 89999999999999999865443 25889999999999998876655543
No 341
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.46 E-value=1.1e-13 Score=153.53 Aligned_cols=130 Identities=21% Similarity=0.216 Sum_probs=63.5
Q ss_pred eEEEEEecCCCceeccCc--cccCCCCCccEEEcccCCCcccCC--ccccCCCCCcEEEeeccccccccChhhhcCCCCC
Q 006903 74 SVRKIVLDGFNLSGILDT--TSVCKTQSLVVLSLEENNIAGTVS--QEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLK 149 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~--~~~~~l~~L~~L~ls~N~l~g~~p--~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~ 149 (626)
+++.|+|++|.+++.+|. ..+..+++|+.|+|++|++++..+ ..+..+++|++|+|++|+|+ .+|..+..+++|+
T Consensus 335 ~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~ 413 (549)
T 2z81_A 335 SLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMR 413 (549)
T ss_dssp TCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCC
T ss_pred cccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhccccccc
Confidence 355555555555554321 123445555555555555554221 23455555555555555555 4555555555555
Q ss_pred eEEccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCCCCC
Q 006903 150 RLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPG 209 (626)
Q Consensus 150 ~L~ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ip~ 209 (626)
+|+|++|.+++....+. ++|+.|++++|++++.+ ..+++|+.|++++|+++ .||.
T Consensus 414 ~L~Ls~N~l~~l~~~~~--~~L~~L~Ls~N~l~~~~--~~l~~L~~L~Ls~N~l~-~ip~ 468 (549)
T 2z81_A 414 FLNLSSTGIRVVKTCIP--QTLEVLDVSNNNLDSFS--LFLPRLQELYISRNKLK-TLPD 468 (549)
T ss_dssp EEECTTSCCSCCCTTSC--TTCSEEECCSSCCSCCC--CCCTTCCEEECCSSCCS-SCCC
T ss_pred EEECCCCCcccccchhc--CCceEEECCCCChhhhc--ccCChhcEEECCCCccC-cCCC
Confidence 55555555543211111 23444444444444322 13556666666666665 4554
No 342
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.45 E-value=3.4e-13 Score=139.46 Aligned_cols=134 Identities=16% Similarity=0.288 Sum_probs=78.4
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCc--ccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCe
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIA--GTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKR 150 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~--g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~ 150 (626)
..++.|+|++|.+++..+ ..+..+++|+.|+|++|.+. |..|..+.++++|++|+|++|+++ .+|..+. ++|+.
T Consensus 121 ~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~ 196 (330)
T 1xku_A 121 KTLQELRVHENEITKVRK-SVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTE 196 (330)
T ss_dssp TTCCEEECCSSCCCBBCH-HHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSE
T ss_pred ccccEEECCCCcccccCH-hHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCE
Confidence 357778888887775433 34666777777777777774 355566666666666666666665 3444332 55555
Q ss_pred EEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCCCCC
Q 006903 151 LDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVPGVN 211 (626)
Q Consensus 151 L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip~~~ 211 (626)
|+|++|.+++..|. +..+++|+.|++++|.+++..|.. .+++|+.|++++|.++ .+|..+
T Consensus 197 L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l 259 (330)
T 1xku_A 197 LHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGL 259 (330)
T ss_dssp EECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTT
T ss_pred EECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhh
Confidence 55555555555443 555555555555555555544421 3455555555555555 444443
No 343
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.45 E-value=2.4e-13 Score=138.26 Aligned_cols=125 Identities=29% Similarity=0.422 Sum_probs=87.2
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|++++..+ +..+++|+.|+|++|.+++ +| .+.++++|++|+|++|++++ + +.+..+++|+.|+
T Consensus 68 ~~L~~L~L~~n~l~~~~~---l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~ 140 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTDIKP---LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLY 140 (291)
T ss_dssp TTCCEEECCSSCCCCCGG---GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEE
T ss_pred CCCCEEEccCCccCCCcc---cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEE
Confidence 457777777777776432 6677777777777777765 33 37777777777777777765 3 4577777777777
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g 205 (626)
|++|++++. +.+..+++|+.|++++|++++..|-..+++|+.|++++|.+++
T Consensus 141 l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~L~~N~i~~ 192 (291)
T 1h6t_A 141 LGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD 192 (291)
T ss_dssp CCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB
T ss_pred ccCCcCCcc-hhhccCCCCCEEEccCCccccchhhcCCCccCEEECCCCcCCC
Confidence 777777764 5577777777777777777766554456777777777777764
No 344
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.44 E-value=4.4e-13 Score=140.65 Aligned_cols=140 Identities=20% Similarity=0.232 Sum_probs=118.1
Q ss_pred CCCCCCCcccEEecCCCCeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCcccc-CCCCCcEEEeecccc
Q 006903 56 SDPCSGKWVGVTCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEIS-NCKQLTHLYVGRNKL 134 (626)
Q Consensus 56 ~~~c~~~w~gv~c~~~~~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~-~l~~L~~L~l~~N~l 134 (626)
...|. ..=.|.. ..+++++++|.. +|. . -...++.|+|++|+|++..+..+. ++++|++|+|++|+|
T Consensus 9 ~~~Cp---~~C~C~~-----~~l~c~~~~l~~-iP~-~--~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i 76 (361)
T 2xot_A 9 VVSCP---ANCLCAS-----NILSCSKQQLPN-VPQ-S--LPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHL 76 (361)
T ss_dssp CTTCC---TTCEEET-----TEEECCSSCCSS-CCS-S--CCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCC
T ss_pred CCCCC---CCCEECC-----CEEEeCCCCcCc-cCc-c--CCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcC
Confidence 46785 3346753 258999999986 443 2 235689999999999987777787 999999999999999
Q ss_pred ccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCC
Q 006903 135 SGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPV 207 (626)
Q Consensus 135 ~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~i 207 (626)
++..|..|.++++|++|||++|+|++..+. +..+++|+.|++++|++++..|.. .+++|+.|++++|.|++..
T Consensus 77 ~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~ 152 (361)
T 2xot_A 77 NFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFP 152 (361)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCC
T ss_pred CccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeC
Confidence 987778899999999999999999998876 899999999999999999876653 5889999999999998643
No 345
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.44 E-value=6.7e-14 Score=127.14 Aligned_cols=111 Identities=21% Similarity=0.255 Sum_probs=98.5
Q ss_pred CCCCccEEEcccCCCc-ccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcE
Q 006903 96 KTQSLVVLSLEENNIA-GTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLT 173 (626)
Q Consensus 96 ~l~~L~~L~ls~N~l~-g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~ 173 (626)
..++|+.|++++|+++ |.+|..+..+++|+.|+|++|.+++. ..++.+++|++|+|++|.+++.+|. +..+++|+.
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 4467999999999999 89999999999999999999999975 7799999999999999999998887 667999999
Q ss_pred EEcCCCccccc-CCC--CCCCCccEEEccCCcCCCCCC
Q 006903 174 FFAENNQLRGG-IPE--FDFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 174 l~l~~N~l~g~-ip~--~~~~~L~~l~ls~N~l~g~ip 208 (626)
|++++|.+++. .|. ..+++|+.|++++|.+++..+
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH
Confidence 99999999974 222 258899999999999987655
No 346
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.44 E-value=1.7e-13 Score=156.08 Aligned_cols=139 Identities=22% Similarity=0.258 Sum_probs=123.9
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|.+++..| ..+..+++|++|+|++|++++..+..|+++++|++|+|++|++++..|..|+++++|++||
T Consensus 49 ~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 127 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEP-ELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLD 127 (680)
T ss_dssp TTCSEEECCSSCCCCCCT-THHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEE
T ss_pred CcCcEEECCCCccCccCH-HHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEE
Confidence 578999999999998765 4788999999999999999975555799999999999999999987778899999999999
Q ss_pred ccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC----CCCCccEEEccCCcCCCCCCCCCC
Q 006903 153 ISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF----DFSNLLQFNVSNNNLSGPVPGVNG 212 (626)
Q Consensus 153 ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~----~~~~L~~l~ls~N~l~g~ip~~~~ 212 (626)
|++|.+++..|. +.++++|+.|++++|.+++..|.. .+++|+.|++++|.+++..|..+.
T Consensus 128 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~ 192 (680)
T 1ziw_A 128 LSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFH 192 (680)
T ss_dssp CCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGG
T ss_pred CCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhh
Confidence 999999998887 889999999999999999877642 468999999999999998887654
No 347
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.43 E-value=3.3e-13 Score=132.87 Aligned_cols=137 Identities=16% Similarity=0.194 Sum_probs=114.7
Q ss_pred CeEEEEEecCCC-ceeccCccccCCCCCccEEEccc-CCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCC-
Q 006903 73 KSVRKIVLDGFN-LSGILDTTSVCKTQSLVVLSLEE-NNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLK- 149 (626)
Q Consensus 73 ~~v~~l~L~~~~-l~g~~~~~~~~~l~~L~~L~ls~-N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~- 149 (626)
.+++.|+|++|. +++. ++..+..+++|+.|+|++ |++++..+..|.++++|++|+|++|++++ +|. +..+++|+
T Consensus 55 ~~L~~L~l~~n~~l~~i-~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQQL-ESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp TTCCEEEEECCSSCCEE-CTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCcEEeCCCCCCccee-CHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 578999999997 7654 444678899999999998 99997766788999999999999999996 787 88888888
Q ss_pred --eEEccCC-cCCccCCC-ccCcCCCc-EEEcCCCcccccCCCC--CCCCccEEEccCCc-CCCCCCCCCCC
Q 006903 150 --RLDISNN-NFSSELPD-LSRISGLL-TFFAENNQLRGGIPEF--DFSNLLQFNVSNNN-LSGPVPGVNGR 213 (626)
Q Consensus 150 --~L~ls~N-~l~g~~p~-~~~~~~L~-~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~-l~g~ip~~~~~ 213 (626)
+|+|++| ++++..+. +..+++|+ .|++++|+++ .+|.. ..++|+.|++++|. +++..|..+..
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~ 202 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGG 202 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTT
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhc
Confidence 9999999 99887776 88999999 9999999998 67764 34679999999994 88555554443
No 348
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.43 E-value=4.4e-13 Score=148.30 Aligned_cols=118 Identities=27% Similarity=0.370 Sum_probs=99.7
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|+|+ .+| ..+++|+.|+|++|+|++ +|. +.+ +|++|+|++|+|++ +|. .+++|+.|+
T Consensus 80 ~~L~~L~Ls~N~l~-~ip----~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~ 146 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP----ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYIN 146 (571)
T ss_dssp TTCSEEECCSSCCS-CCC----CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEE
T ss_pred CCCCEEECcCCCCc-ccc----cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEe
Confidence 46889999999998 455 357889999999999998 887 765 89999999999987 777 689999999
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCCCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPG 209 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ip~ 209 (626)
|++|+|++ +|. .+++|+.|++++|++++ +|.+. ++|+.|++++|+|+ .+|.
T Consensus 147 Ls~N~l~~-lp~--~l~~L~~L~Ls~N~L~~-lp~l~-~~L~~L~Ls~N~L~-~lp~ 197 (571)
T 3cvr_A 147 ADNNQLTM-LPE--LPTSLEVLSVRNNQLTF-LPELP-ESLEALDVSTNLLE-SLPA 197 (571)
T ss_dssp CCSSCCSC-CCC--CCTTCCEEECCSSCCSC-CCCCC-TTCCEEECCSSCCS-SCCC
T ss_pred CCCCccCc-CCC--cCCCcCEEECCCCCCCC-cchhh-CCCCEEECcCCCCC-chhh
Confidence 99999998 665 57889999999999987 77643 78999999999998 6776
No 349
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.43 E-value=2.4e-13 Score=150.82 Aligned_cols=117 Identities=18% Similarity=0.179 Sum_probs=69.4
Q ss_pred EEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEcc
Q 006903 75 VRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDIS 154 (626)
Q Consensus 75 v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls 154 (626)
++.|+|++|+|++ +| .++.+++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +| .++.+++|+.|+|+
T Consensus 443 L~~L~Ls~n~l~~-lp--~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LC--HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp CSEEECTTSCCSS-CC--CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred ceEEEecCCCCCC-Cc--CccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 4556666666665 33 2556666666666666666 556666666666666666666664 45 56666666666666
Q ss_pred CCcCCccC-CC-ccCcCCCcEEEcCCCcccccCCCC-----CCCCccEEE
Q 006903 155 NNNFSSEL-PD-LSRISGLLTFFAENNQLRGGIPEF-----DFSNLLQFN 197 (626)
Q Consensus 155 ~N~l~g~~-p~-~~~~~~L~~l~l~~N~l~g~ip~~-----~~~~L~~l~ 197 (626)
+|+|++.+ |. +..+++|+.|++++|.+++.+|.. .+++|+.||
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~ 566 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSIL 566 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEE
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccC
Confidence 66666654 43 666666666666666666555432 155555554
No 350
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.43 E-value=2.3e-13 Score=126.23 Aligned_cols=112 Identities=18% Similarity=0.206 Sum_probs=99.0
Q ss_pred CCCCCccEEEcccCCCc-ccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCc
Q 006903 95 CKTQSLVVLSLEENNIA-GTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLL 172 (626)
Q Consensus 95 ~~l~~L~~L~ls~N~l~-g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~ 172 (626)
...++|+.|+|++|+++ |.+|..+..+++|+.|+|++|.+++. ..+..+++|++|+|++|.+++.+|. +..+++|+
T Consensus 21 ~~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 98 (168)
T 2ell_A 21 RTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLT 98 (168)
T ss_dssp SCTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCC
T ss_pred CCcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCC
Confidence 34578999999999998 89999999999999999999999975 7799999999999999999998887 56699999
Q ss_pred EEEcCCCcccccC--CCC-CCCCccEEEccCCcCCCCCC
Q 006903 173 TFFAENNQLRGGI--PEF-DFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 173 ~l~l~~N~l~g~i--p~~-~~~~L~~l~ls~N~l~g~ip 208 (626)
.|++++|++++.. +.. .+++|+.|++++|.+++..+
T Consensus 99 ~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 137 (168)
T 2ell_A 99 HLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLND 137 (168)
T ss_dssp EEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTT
T ss_pred EEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHH
Confidence 9999999998742 222 58899999999999987655
No 351
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.43 E-value=5.4e-13 Score=141.32 Aligned_cols=130 Identities=25% Similarity=0.264 Sum_probs=116.1
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChh-hhcCCCCCeE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDS-LSKLNNLKRL 151 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~-~~~l~~L~~L 151 (626)
.+++.|+|++|++.+..+ ..+..+++|+.|+|++|.+++..|..++++++|++|+|++|+++ .+|.. +.++++|++|
T Consensus 69 ~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L 146 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDT-YAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTL 146 (390)
T ss_dssp CCCSEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEE
T ss_pred ccCcEEECCCCcccccCh-hhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEE
Confidence 468999999999987654 47889999999999999999988888999999999999999999 56655 6899999999
Q ss_pred EccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCC
Q 006903 152 DISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 152 ~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g 205 (626)
+|++|.+++..|. +..+++|+.|++++|++++. +...+++|+.|++++|.+++
T Consensus 147 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~l~~L~~L~l~~n~l~~ 200 (390)
T 3o6n_A 147 SMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-DLSLIPSLFHANVSYNLLST 200 (390)
T ss_dssp ECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC-CGGGCTTCSEEECCSSCCSE
T ss_pred ECCCCccCccChhhccCCCCCCEEECCCCcCCcc-ccccccccceeecccccccc
Confidence 9999999998886 89999999999999999864 55568899999999998875
No 352
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.42 E-value=2.8e-13 Score=146.69 Aligned_cols=100 Identities=21% Similarity=0.219 Sum_probs=56.3
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|++.|.+ .+..+++|+.|+|++|++++ +| ++.+++|+.|+|++|++++. .++.+++|+.|+
T Consensus 148 ~~L~~L~l~~n~~~~~~---~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~ 218 (457)
T 3bz5_A 148 TQLTELDCHLNKKITKL---DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLD 218 (457)
T ss_dssp TTCCEEECTTCSCCCCC---CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEE
T ss_pred CcCCEEECCCCCccccc---ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEE
Confidence 34566666666555544 24455666666666666665 34 55555566666666655543 255555555566
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccc
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRG 183 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g 183 (626)
|++|+|++ +| +..+++|+.|++++|+++|
T Consensus 219 Ls~N~l~~-ip-~~~l~~L~~L~l~~N~l~~ 247 (457)
T 3bz5_A 219 CSSNKLTE-ID-VTPLTQLTYFDCSVNPLTE 247 (457)
T ss_dssp CCSSCCSC-CC-CTTCTTCSEEECCSSCCSC
T ss_pred CcCCcccc-cC-ccccCCCCEEEeeCCcCCC
Confidence 66555555 34 5555555555555555554
No 353
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.42 E-value=6.2e-13 Score=123.82 Aligned_cols=106 Identities=22% Similarity=0.269 Sum_probs=85.2
Q ss_pred EEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCC
Q 006903 77 KIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNN 156 (626)
Q Consensus 77 ~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N 156 (626)
.|++++|+|+. +|. .+ .++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 13 ~l~~s~n~l~~-ip~-~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 13 TVDCSGKSLAS-VPT-GI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp EEECTTSCCSS-CCS-CC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCc-cCc-cC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 57788888876 443 23 377899999999999888888899999999999999998666666788999999999999
Q ss_pred cCCccCCC-ccCcCCCcEEEcCCCcccccCC
Q 006903 157 NFSSELPD-LSRISGLLTFFAENNQLRGGIP 186 (626)
Q Consensus 157 ~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip 186 (626)
+|++..|. +..+++|+.|++++|.+++..+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 99887775 7788888888888888776543
No 354
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.42 E-value=4.9e-13 Score=137.04 Aligned_cols=128 Identities=20% Similarity=0.299 Sum_probs=100.5
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|++.+..+ +..+++|+.|+|++|.+++ +| .+..+++|+.|+|++|++++ +|. +..+++|+.|+
T Consensus 63 ~~L~~L~L~~n~i~~~~~---~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~ 135 (308)
T 1h6u_A 63 NNLIGLELKDNQITDLAP---LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLY 135 (308)
T ss_dssp TTCCEEECCSSCCCCCGG---GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEE
T ss_pred CCCCEEEccCCcCCCChh---HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEE
Confidence 468888888888886432 7788888888888888886 34 68888888888888888876 443 88888888888
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ip 208 (626)
|++|.+++..+ +..+++|+.|++++|++++..+-..+++|+.|++++|.+++..|
T Consensus 136 l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~ 190 (308)
T 1h6u_A 136 LDLNQITNISP-LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP 190 (308)
T ss_dssp CCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG
T ss_pred CCCCccCcCcc-ccCCCCccEEEccCCcCCCChhhcCCCCCCEEECCCCccCcChh
Confidence 88888887544 78888888888888888865553457888888888888876544
No 355
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.41 E-value=8.2e-13 Score=122.97 Aligned_cols=106 Identities=21% Similarity=0.312 Sum_probs=94.8
Q ss_pred ccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCC
Q 006903 100 LVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAEN 178 (626)
Q Consensus 100 L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~ 178 (626)
.+.+++++|+++. +|..+. ++|++|+|++|+|++..|..|.++++|++|||++|+|++..|. +..+++|+.|++++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 5789999999995 887774 8899999999999998899999999999999999999988776 78999999999999
Q ss_pred CcccccCCC-C-CCCCccEEEccCCcCCCCCC
Q 006903 179 NQLRGGIPE-F-DFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 179 N~l~g~ip~-~-~~~~L~~l~ls~N~l~g~ip 208 (626)
|++++..|. + .+++|+.|++++|.|++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 999976664 2 58899999999999986654
No 356
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.41 E-value=5.8e-13 Score=133.27 Aligned_cols=125 Identities=24% Similarity=0.283 Sum_probs=86.6
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|+++. ++ .+..+++|+.|+|++|++++. |+ +.++++|+.|+|++|++++ +|.. .. ++|+.|+
T Consensus 41 ~~L~~L~l~~n~i~~-l~--~l~~l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~~L~ 112 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQS-LA--GMQFFTNLKELHLSHNQISDL-SP-LKDLTKLEELSVNRNRLKN-LNGI-PS-ACLSRLF 112 (263)
T ss_dssp TTCSEEECTTSCCCC-CT--TGGGCTTCCEEECCSSCCCCC-GG-GTTCSSCCEEECCSSCCSC-CTTC-CC-SSCCEEE
T ss_pred CcCcEEECcCCCccc-ch--HHhhCCCCCEEECCCCccCCC-hh-hccCCCCCEEECCCCccCC-cCcc-cc-CcccEEE
Confidence 356777777777764 32 466777778888888877764 33 7777778888888887775 4432 22 7777788
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGP 206 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ 206 (626)
|++|++++ +|.+..+++|+.|++++|++++.-+-..+++|+.|++++|.+++.
T Consensus 113 L~~N~l~~-~~~l~~l~~L~~L~Ls~N~i~~~~~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 113 LDNNELRD-TDSLIHLKNLEILSIRNNKLKSIVMLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp CCSSCCSB-SGGGTTCTTCCEEECTTSCCCBCGGGGGCTTCCEEECTTSCCCBC
T ss_pred ccCCccCC-ChhhcCcccccEEECCCCcCCCChHHccCCCCCEEECCCCcCcch
Confidence 88877776 355777777777888777777642222567777777777777755
No 357
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.41 E-value=5e-13 Score=149.29 Aligned_cols=126 Identities=29% Similarity=0.412 Sum_probs=103.6
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|+|++..+ ++.+++|+.|+|++|.|++ +| .+..|++|+.|+|++|+|++ + +.+..|++|+.|+
T Consensus 65 ~~L~~L~Ls~N~l~~~~~---l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~ 137 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTDIKP---LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLY 137 (605)
T ss_dssp TTCCEEECTTSCCCCCGG---GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEE
T ss_pred CCCCEEEeeCCCCCCChh---hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEE
Confidence 568889999999887543 7788889999999998886 34 68888889999999998885 3 4588888899999
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGP 206 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ 206 (626)
|++|.|++. +.+..+++|+.|+|++|.+++..|-..+++|+.|+|++|.|++.
T Consensus 138 Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~i~~l 190 (605)
T 1m9s_A 138 LGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDL 190 (605)
T ss_dssp CCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBC
T ss_pred CCCCccCCc-hhhcccCCCCEEECcCCcCCCchhhccCCCCCEEECcCCCCCCC
Confidence 999988875 66888888889999988888877755688888888888888763
No 358
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.41 E-value=3.2e-13 Score=126.46 Aligned_cols=126 Identities=15% Similarity=0.222 Sum_probs=104.9
Q ss_pred CeEEEEEecCCCceeccCccccCCCC-CccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQ-SLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRL 151 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~-~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L 151 (626)
..++.|+|++|+++. ++ .+..+. +|+.|+|++|++++. ..+..+++|++|+|++|+|++..|..+..+++|++|
T Consensus 19 ~~L~~L~l~~n~l~~-i~--~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 19 VRDRELDLRGYKIPV-IE--NLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 93 (176)
T ss_dssp TSCEEEECTTSCCCS-CC--CGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred CCceEEEeeCCCCch-hH--HhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEE
Confidence 468999999999985 33 355554 999999999999975 679999999999999999996544555999999999
Q ss_pred EccCCcCCccCC--CccCcCCCcEEEcCCCcccccCCCC------CCCCccEEEccCCcCC
Q 006903 152 DISNNNFSSELP--DLSRISGLLTFFAENNQLRGGIPEF------DFSNLLQFNVSNNNLS 204 (626)
Q Consensus 152 ~ls~N~l~g~~p--~~~~~~~L~~l~l~~N~l~g~ip~~------~~~~L~~l~ls~N~l~ 204 (626)
+|++|.|+...+ .+..+++|+.|++++|.++ .+|.. .+++|+.|+++.|...
T Consensus 94 ~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 94 ILTNNSLVELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp ECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ECCCCcCCcchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 999999965443 4888999999999999998 45652 4889999999988764
No 359
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.40 E-value=1e-12 Score=122.86 Aligned_cols=106 Identities=20% Similarity=0.267 Sum_probs=85.4
Q ss_pred EEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccC
Q 006903 76 RKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISN 155 (626)
Q Consensus 76 ~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~ 155 (626)
+.+++++|+|. .+|. .+ .++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|||++
T Consensus 15 ~~l~~~~n~l~-~iP~-~~--~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPA-GI--PTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCCS-SCCS-CC--CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCCC-ccCC-Cc--CCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 45888999885 4554 33 37899999999999988888899999999999999999875445568899999999999
Q ss_pred CcCCccCCC-ccCcCCCcEEEcCCCcccccC
Q 006903 156 NNFSSELPD-LSRISGLLTFFAENNQLRGGI 185 (626)
Q Consensus 156 N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~i 185 (626)
|+|++..+. +..+++|+.|++++|.+....
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 999987776 778888888888888877543
No 360
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.40 E-value=1.1e-12 Score=135.86 Aligned_cols=135 Identities=17% Similarity=0.237 Sum_probs=116.5
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|++++..| ..+..+++|+.|+|++|+++ .+|..+. ++|++|+|++|++++..+..+.++++|+.|+
T Consensus 78 ~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~ 153 (332)
T 2ft3_A 78 QHLYALVLVNNKISKIHE-KAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIE 153 (332)
T ss_dssp TTCCEEECCSSCCCEECG-GGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEE
T ss_pred CCCcEEECCCCccCccCH-hHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEE
Confidence 579999999999998765 47899999999999999999 6887766 8999999999999976666799999999999
Q ss_pred ccCCcCC--ccCCC-ccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCCCCCCCCC
Q 006903 153 ISNNNFS--SELPD-LSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPGVNGR 213 (626)
Q Consensus 153 ls~N~l~--g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ip~~~~~ 213 (626)
|++|.++ +..|. +..+ +|+.|++++|++++ +|....++|+.|++++|.+++..|..+..
T Consensus 154 l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~~~L~~L~l~~n~i~~~~~~~l~~ 215 (332)
T 2ft3_A 154 MGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLPETLNELHLDHNKIQAIELEDLLR 215 (332)
T ss_dssp CCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSCSSCSCCBCCSSCCCCCCTTSSTT
T ss_pred CCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCccccCCCCEEECCCCcCCccCHHHhcC
Confidence 9999996 35565 6666 99999999999986 77666789999999999999887766544
No 361
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.40 E-value=8.3e-13 Score=135.33 Aligned_cols=124 Identities=21% Similarity=0.382 Sum_probs=69.5
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEc
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDI 153 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~l 153 (626)
+++.|+++++++.. ++ .+..+++|+.|+|++|++++. |. +..+++|++|+|++|++++ +| .+..+++|+.|+|
T Consensus 42 ~L~~L~l~~~~i~~-l~--~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l 114 (308)
T 1h6u_A 42 GITTLSAFGTGVTT-IE--GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDL 114 (308)
T ss_dssp TCCEEECTTSCCCC-CT--TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEEC
T ss_pred CcCEEEeeCCCccC-ch--hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEEC
Confidence 45556666665553 22 345556666666666666542 32 5566666666666666654 22 4556666666666
Q ss_pred cCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCC
Q 006903 154 SNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 154 s~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g 205 (626)
++|++++ +|.+..+++|+.|++++|++++..+-..+++|+.|++++|.+++
T Consensus 115 ~~n~l~~-~~~l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~ 165 (308)
T 1h6u_A 115 TSTQITD-VTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSD 165 (308)
T ss_dssp TTSCCCC-CGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCC
T ss_pred CCCCCCC-chhhcCCCCCCEEECCCCccCcCccccCCCCccEEEccCCcCCC
Confidence 6666655 23355566666666666666554332345566666666666654
No 362
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.39 E-value=5.8e-13 Score=144.64 Aligned_cols=128 Identities=24% Similarity=0.336 Sum_probs=104.0
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|.+++..+ +..+++|+.|+|++|.+++..| +..+++|+.|+|++|++++..| +..+++|+.|+
T Consensus 243 ~~L~~L~l~~n~l~~~~~---~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 315 (466)
T 1o6v_A 243 TNLTDLDLANNQISNLAP---LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLT 315 (466)
T ss_dssp TTCSEEECCSSCCCCCGG---GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEE
T ss_pred CCCCEEECCCCccccchh---hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEE
Confidence 468889999999887643 6788889999999999887444 7888899999999999886544 78888999999
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ip 208 (626)
|++|++++..| +..+++|+.|++++|.+++..+-..+++|+.|++++|+++|.+|
T Consensus 316 L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~ 370 (466)
T 1o6v_A 316 LYFNNISDISP-VSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTP 370 (466)
T ss_dssp CCSSCCSCCGG-GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBCGG
T ss_pred CcCCcCCCchh-hccCccCCEeECCCCccCCchhhccCCCCCEEeCCCCccCccch
Confidence 99999888766 77888888888888888876322357888888888888888877
No 363
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.39 E-value=1.4e-12 Score=121.84 Aligned_cols=104 Identities=17% Similarity=0.298 Sum_probs=92.4
Q ss_pred ccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCC
Q 006903 100 LVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAEN 178 (626)
Q Consensus 100 L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~ 178 (626)
-+.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+. +..+++|+.|++++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 478999999996 6888775 8999999999999998899999999999999999999997776 68999999999999
Q ss_pred CcccccCCC-C-CCCCccEEEccCCcCCCC
Q 006903 179 NQLRGGIPE-F-DFSNLLQFNVSNNNLSGP 206 (626)
Q Consensus 179 N~l~g~ip~-~-~~~~L~~l~ls~N~l~g~ 206 (626)
|++++..+. + .+++|+.|++++|.|+..
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 999976554 2 588999999999998743
No 364
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.39 E-value=8.6e-13 Score=132.02 Aligned_cols=125 Identities=19% Similarity=0.226 Sum_probs=108.6
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|++++..+ +..+++|+.|+|++|++++ +|.. .. ++|+.|+|++|++++ +| .+..+++|+.|+
T Consensus 63 ~~L~~L~L~~N~i~~~~~---l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~ 134 (263)
T 1xeu_A 63 TNLKELHLSHNQISDLSP---LKDLTKLEELSVNRNRLKN-LNGI-PS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILS 134 (263)
T ss_dssp TTCCEEECCSSCCCCCGG---GTTCSSCCEEECCSSCCSC-CTTC-CC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEE
T ss_pred CCCCEEECCCCccCCChh---hccCCCCCEEECCCCccCC-cCcc-cc-CcccEEEccCCccCC-Ch-hhcCcccccEEE
Confidence 579999999999998543 8899999999999999997 5543 33 999999999999996 44 699999999999
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGP 206 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ 206 (626)
|++|++++. |.+..+++|+.|++++|++++.-.-..+++|+.|++++|.+++.
T Consensus 135 Ls~N~i~~~-~~l~~l~~L~~L~L~~N~i~~~~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 135 IRNNKLKSI-VMLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CTTSCCCBC-GGGGGCTTCCEEECTTSCCCBCTTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCCcCCCC-hHHccCCCCCEEECCCCcCcchHHhccCCCCCEEeCCCCcccCC
Confidence 999999985 67999999999999999999872223688999999999999866
No 365
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.39 E-value=9.1e-13 Score=133.90 Aligned_cols=127 Identities=23% Similarity=0.415 Sum_probs=111.4
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+++++++... + .+..+++|+.|+|++|++++..| +.++++|++|+|++|++++ +| .+..+++|++|+
T Consensus 46 ~~L~~L~l~~~~i~~~-~--~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~ 118 (291)
T 1h6t_A 46 NSIDQIIANNSDIKSV-Q--GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLS 118 (291)
T ss_dssp HTCCEEECTTSCCCCC-T--TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEE
T ss_pred CcccEEEccCCCcccC-h--hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEE
Confidence 4688999999999864 2 47889999999999999997544 9999999999999999986 44 499999999999
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCC-CCCCccEEEccCCcCCCCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF-DFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~-~~~~L~~l~ls~N~l~g~ip 208 (626)
|++|++++ ++.+..+++|+.|++++|++++. +.. .+++|+.|++++|.+++..|
T Consensus 119 L~~n~i~~-~~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~ 173 (291)
T 1h6t_A 119 LEHNGISD-INGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP 173 (291)
T ss_dssp CTTSCCCC-CGGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred CCCCcCCC-ChhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh
Confidence 99999998 47799999999999999999976 443 68999999999999998665
No 366
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.38 E-value=4.7e-13 Score=139.84 Aligned_cols=133 Identities=19% Similarity=0.192 Sum_probs=113.2
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccCh--hhhcCCCCCe
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPD--SLSKLNNLKR 150 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~--~~~~l~~L~~ 150 (626)
.+++.|+|++|++++..+ ..+..+++|+.|+|++|++++..+..+.++++|++|+|++|+++ .+|. .+.++++|++
T Consensus 76 ~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~ 153 (353)
T 2z80_A 76 VNLQALVLTSNGINTIEE-DSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQI 153 (353)
T ss_dssp TTCCEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCE
T ss_pred CCCCEEECCCCccCccCH-hhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcE
Confidence 579999999999998654 46889999999999999999754455899999999999999998 4665 7899999999
Q ss_pred EEccCCc-CCccCCC-ccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCC
Q 006903 151 LDISNNN-FSSELPD-LSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 151 L~ls~N~-l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip 208 (626)
|+|++|+ +++..|. +..+++|+.|++++|++++..|.. .+++|+.|++++|.++ .+|
T Consensus 154 L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~ 214 (353)
T 2z80_A 154 LRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLL 214 (353)
T ss_dssp EEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST-THH
T ss_pred EECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc-cch
Confidence 9999995 6666565 889999999999999999887764 5788999999999884 344
No 367
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.38 E-value=1.4e-15 Score=145.50 Aligned_cols=132 Identities=22% Similarity=0.307 Sum_probs=105.0
Q ss_pred eEEEEEecCCCceeccCc-----cccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCC
Q 006903 74 SVRKIVLDGFNLSGILDT-----TSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNL 148 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~-----~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L 148 (626)
.++.++|+.+.|+|.+|. ..+..+++|+.|+|++|++++ +| .+.++++|++|+|++|+++ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 455566666677776653 156778889999999999987 77 8888999999999999998 688888888899
Q ss_pred CeEEccCCcCCccCCCccCcCCCcEEEcCCCcccccCC--C-CCCCCccEEEccCCcCCCCCCC
Q 006903 149 KRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIP--E-FDFSNLLQFNVSNNNLSGPVPG 209 (626)
Q Consensus 149 ~~L~ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip--~-~~~~~L~~l~ls~N~l~g~ip~ 209 (626)
++|+|++|++++ +|.+..+++|+.|++++|++++..+ . ..+++|+.|++++|.+++.+|.
T Consensus 96 ~~L~L~~N~l~~-l~~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 96 EELWISYNQIAS-LSGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp SEEEEEEEECCC-HHHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CEEECcCCcCCc-CCccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 999999999987 4678888889999999999885322 2 2578899999999988877664
No 368
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.37 E-value=2.9e-12 Score=138.54 Aligned_cols=135 Identities=25% Similarity=0.367 Sum_probs=73.2
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEc
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDI 153 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~l 153 (626)
+++.|+|++|++++ +| .++.+++|+.|++++|++++ +|..+ .+|++|+|++|++++ +| .++++++|+.|++
T Consensus 132 ~L~~L~L~~n~l~~-lp--~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 132 LLEYLGVSNNQLEK-LP--ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TCCEEECCSSCCSS-CC--CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCEEECcCCCCCC-Cc--ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 34444444444444 33 24455555555555555553 34322 245555555555554 44 3555555566666
Q ss_pred cCCcCCccCCCccCcCCCcEEEcCCCcccccCCCC-CCCCccEEEccCCcCCCCCCCCCCCCcccCCCCC
Q 006903 154 SNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF-DFSNLLQFNVSNNNLSGPVPGVNGRLGADSFSGN 222 (626)
Q Consensus 154 s~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~-~~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~gn 222 (626)
++|++++ +|.+. ++|+.|++++|+++ .+|.+ .+++|+.|++++|++++ +|.....+....+.+|
T Consensus 203 ~~N~l~~-l~~~~--~~L~~L~l~~n~l~-~lp~~~~l~~L~~L~l~~N~l~~-l~~~~~~L~~L~l~~N 267 (454)
T 1jl5_A 203 DNNSLKK-LPDLP--LSLESIVAGNNILE-ELPELQNLPFLTTIYADNNLLKT-LPDLPPSLEALNVRDN 267 (454)
T ss_dssp CSSCCSS-CCCCC--TTCCEEECCSSCCS-SCCCCTTCTTCCEEECCSSCCSS-CCSCCTTCCEEECCSS
T ss_pred CCCcCCc-CCCCc--CcccEEECcCCcCC-cccccCCCCCCCEEECCCCcCCc-ccccccccCEEECCCC
Confidence 6555554 33211 35566666666665 55543 47788999999999886 5655444444444444
No 369
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.36 E-value=8.3e-13 Score=135.87 Aligned_cols=136 Identities=21% Similarity=0.239 Sum_probs=113.7
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCcccc-CCCCCcEEEeeccccccccChhhhcCCCCCeE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEIS-NCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRL 151 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L 151 (626)
..++.|+|++|.+++..+ ..+..+++|+.|+|++|.+++..|..+. .+++|++|+|++|++++. |. ...+++|++|
T Consensus 120 ~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L 196 (317)
T 3o53_A 120 QGKKNIYLANNKITMLRD-LDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTL 196 (317)
T ss_dssp SSCEEEECCSSCCCSGGG-BCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEE
T ss_pred CCCCEEECCCCCCCCccc-hhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEE
Confidence 357778888888877554 3677889999999999999998787774 799999999999999865 43 3459999999
Q ss_pred EccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCC-CCCCCCCC
Q 006903 152 DISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLS-GPVPGVNG 212 (626)
Q Consensus 152 ~ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~-g~ip~~~~ 212 (626)
+|++|++++..|.+..+++|+.|++++|++++ +|.. .+++|+.|++++|.++ +.+|..+.
T Consensus 197 ~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~ 259 (317)
T 3o53_A 197 DLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (317)
T ss_dssp ECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHHHHHHHHH
T ss_pred ECCCCcCCcchhhhcccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCcCHHHHHh
Confidence 99999999987889999999999999999995 5653 5789999999999998 65555443
No 370
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.36 E-value=3.5e-12 Score=138.06 Aligned_cols=123 Identities=24% Similarity=0.240 Sum_probs=90.2
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|.+++ ++ +..+++|+.|+|++|++++ +| ++++++|++|++++|++.|.++ ++.+++|+.|+
T Consensus 106 ~~L~~L~L~~N~l~~-l~---~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~~--~~~l~~L~~L~ 176 (457)
T 3bz5_A 106 TKLTYLNCDTNKLTK-LD---VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKLD--VTPQTQLTTLD 176 (457)
T ss_dssp TTCCEEECCSSCCSC-CC---CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCCC--CTTCTTCCEEE
T ss_pred CcCCEEECCCCcCCe-ec---CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCcccccc--cccCCcCCEEE
Confidence 568889999999887 32 6788888888888888887 43 7777888888888886666663 66777777777
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ip 208 (626)
|++|++++ +| +..+++|+.|++++|++++. +-..+++|+.|++++|++++ +|
T Consensus 177 ls~n~l~~-l~-l~~l~~L~~L~l~~N~l~~~-~l~~l~~L~~L~Ls~N~l~~-ip 228 (457)
T 3bz5_A 177 CSFNKITE-LD-VSQNKLLNRLNCDTNNITKL-DLNQNIQLTFLDCSSNKLTE-ID 228 (457)
T ss_dssp CCSSCCCC-CC-CTTCTTCCEEECCSSCCSCC-CCTTCTTCSEEECCSSCCSC-CC
T ss_pred CCCCccce-ec-cccCCCCCEEECcCCcCCee-ccccCCCCCEEECcCCcccc-cC
Confidence 77777777 34 66667777777777777654 43456677777777777776 44
No 371
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.36 E-value=1.9e-12 Score=144.63 Aligned_cols=127 Identities=24% Similarity=0.387 Sum_probs=113.4
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|.|++. + .+..+++|+.|+|++|+|++ + +.+..|++|+.|+|++|+|++. +.+..|++|+.|+
T Consensus 87 ~~L~~L~Ls~N~l~~l-~--~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~ 159 (605)
T 1m9s_A 87 KNLGWLFLDENKIKDL-S--SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLS 159 (605)
T ss_dssp TTCCEEECCSSCCCCC-T--TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEE
T ss_pred CCCCEEECcCCCCCCC-h--hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEE
Confidence 5799999999999873 2 68899999999999999997 3 4699999999999999999975 6799999999999
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCC-CCCCccEEEccCCcCCCCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF-DFSNLLQFNVSNNNLSGPVP 208 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~-~~~~L~~l~ls~N~l~g~ip 208 (626)
|++|.|++.+| +..+++|+.|+|++|++++. |.. .+++|+.|+|++|.+++...
T Consensus 160 Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~l~~~p~ 214 (605)
T 1m9s_A 160 LEDNQISDIVP-LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECLNKPI 214 (605)
T ss_dssp CCSSCCCCCGG-GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEEEECCCC
T ss_pred CcCCcCCCchh-hccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCcCcCCcc
Confidence 99999999877 99999999999999999975 543 68999999999999987643
No 372
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.35 E-value=1.7e-12 Score=140.91 Aligned_cols=126 Identities=25% Similarity=0.367 Sum_probs=113.0
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|++.+. +.+..+++|+.|+|++|.+++..| +..+++|+.|+|++|.+++..| +..+++|+.|+
T Consensus 221 ~~L~~L~l~~n~l~~~---~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 293 (466)
T 1o6v_A 221 TNLDELSLNGNQLKDI---GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLE 293 (466)
T ss_dssp TTCCEEECCSSCCCCC---GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEE
T ss_pred CCCCEEECCCCCcccc---hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEE
Confidence 5789999999999874 257889999999999999998655 8999999999999999997544 89999999999
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGP 206 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ 206 (626)
|++|++++..| +..+++|+.|++++|++++..|...+++|+.|++++|.+++.
T Consensus 294 L~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 294 LNENQLEDISP-ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp CCSSCCSCCGG-GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCCC
T ss_pred cCCCcccCchh-hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccCCc
Confidence 99999998655 889999999999999999988866799999999999999985
No 373
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.34 E-value=2.2e-12 Score=134.16 Aligned_cols=128 Identities=21% Similarity=0.295 Sum_probs=72.3
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|+.|+|++|++++. |. +..+++|++|+
T Consensus 177 ~~L~~L~l~~n~l~~~~~---~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~ 249 (347)
T 4fmz_A 177 TDLYSLSLNYNQIEDISP---LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDL-SP-LANLSQLTWLE 249 (347)
T ss_dssp TTCSEEECTTSCCCCCGG---GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEE
T ss_pred CCCCEEEccCCccccccc---ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCC-cc-hhcCCCCCEEE
Confidence 457777777777765322 4555666666666666654333 55566666666666666533 22 55566666666
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCC-CCCCccEEEccCCcCCCCCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF-DFSNLLQFNVSNNNLSGPVPG 209 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~-~~~~L~~l~ls~N~l~g~ip~ 209 (626)
|++|.+++ ++.+..+++|+.|++++|++++. |.. .+++|+.|++++|.+++..|.
T Consensus 250 l~~n~l~~-~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~~~~~ 305 (347)
T 4fmz_A 250 IGTNQISD-INAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQLGNEDME 305 (347)
T ss_dssp CCSSCCCC-CGGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCGGGHH
T ss_pred CCCCccCC-ChhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcCCCcChh
Confidence 66666554 24455555666666666655543 322 355555555555555554443
No 374
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.32 E-value=2.1e-12 Score=134.40 Aligned_cols=143 Identities=25% Similarity=0.366 Sum_probs=117.0
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|++++|.+.+..+ +..+++|+.|+|++|.+++..+ +..+++|++|+|++|.+++ + +.+..+++|+.|+
T Consensus 199 ~~L~~L~l~~n~l~~~~~---~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~ 271 (347)
T 4fmz_A 199 TSLHYFTAYVNQITDITP---VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLN 271 (347)
T ss_dssp TTCCEEECCSSCCCCCGG---GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEE
T ss_pred CccceeecccCCCCCCch---hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEE
Confidence 568899999999987543 6788999999999999987443 8999999999999999986 3 5689999999999
Q ss_pred ccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCC--CCCCccEEEccCCcCCCCCC-CCCCCCcccCCCCCC
Q 006903 153 ISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF--DFSNLLQFNVSNNNLSGPVP-GVNGRLGADSFSGNP 223 (626)
Q Consensus 153 ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~--~~~~L~~l~ls~N~l~g~ip-~~~~~~~~~~~~gn~ 223 (626)
|++|++++. |.+..+++|+.|++++|.+++..|.. .+++|+.|++++|.+++..| ..+.++....+.+|+
T Consensus 272 l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~N~ 344 (347)
T 4fmz_A 272 VGSNQISDI-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFANQV 344 (347)
T ss_dssp CCSSCCCCC-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGGGGGCTTCSEESSSCC-
T ss_pred ccCCccCCC-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccChhhhhccceeehhhhc
Confidence 999999885 77889999999999999999877763 68999999999999998877 112333444455553
No 375
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.32 E-value=8.1e-12 Score=135.03 Aligned_cols=121 Identities=27% Similarity=0.440 Sum_probs=88.7
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEc
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDI 153 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~l 153 (626)
+++.|+|++|++++. +. ..++|+.|+|++|++++ +| +++++++|++|++++|++++ +|..+ .+|++|+|
T Consensus 112 ~L~~L~l~~n~l~~l-~~----~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L 180 (454)
T 1jl5_A 112 SLKSLLVDNNNLKAL-SD----LPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAA 180 (454)
T ss_dssp TCCEEECCSSCCSCC-CS----CCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEEC
T ss_pred CCcEEECCCCccCcc-cC----CCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEEC
Confidence 455566666655542 11 12578888888888886 77 58888888888888888875 66543 57888888
Q ss_pred cCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCcCCCCCCC
Q 006903 154 SNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNNLSGPVPG 209 (626)
Q Consensus 154 s~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~l~g~ip~ 209 (626)
++|++++ +|.+..+++|+.|++++|++++ +|.. .++|+.|++++|.++ .+|.
T Consensus 181 ~~n~l~~-l~~~~~l~~L~~L~l~~N~l~~-l~~~-~~~L~~L~l~~n~l~-~lp~ 232 (454)
T 1jl5_A 181 GNNQLEE-LPELQNLPFLTAIYADNNSLKK-LPDL-PLSLESIVAGNNILE-ELPE 232 (454)
T ss_dssp CSSCCSS-CCCCTTCTTCCEEECCSSCCSS-CCCC-CTTCCEEECCSSCCS-SCCC
T ss_pred cCCcCCc-CccccCCCCCCEEECCCCcCCc-CCCC-cCcccEEECcCCcCC-cccc
Confidence 8888887 6678888888888888888886 4532 368888888888888 6775
No 376
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.29 E-value=7.1e-12 Score=130.48 Aligned_cols=101 Identities=19% Similarity=0.177 Sum_probs=84.0
Q ss_pred cCC-CceeccCccccCCCCCccEEEccc-CCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcC
Q 006903 81 DGF-NLSGILDTTSVCKTQSLVVLSLEE-NNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158 (626)
Q Consensus 81 ~~~-~l~g~~~~~~~~~l~~L~~L~ls~-N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l 158 (626)
+++ +|++ +|. +..+++|+.|+|++ |+|++..|..|.++++|+.|+|++|+|+|..|..|.+|++|+.|||++|+|
T Consensus 16 ~~~n~l~~-ip~--l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 92 (347)
T 2ifg_A 16 TRDGALDS-LHH--LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNAL 92 (347)
T ss_dssp CSSCCCTT-TTT--SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCC
T ss_pred CCCCCCCc-cCC--CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCcc
Confidence 344 5665 554 88889999999996 999988778899999999999999999998888999999999999999999
Q ss_pred CccCCCccCcCCCcEEEcCCCccccc
Q 006903 159 SSELPDLSRISGLLTFFAENNQLRGG 184 (626)
Q Consensus 159 ~g~~p~~~~~~~L~~l~l~~N~l~g~ 184 (626)
++.+|.+.....|+.|++.+|.|...
T Consensus 93 ~~~~~~~~~~~~L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 93 ESLSWKTVQGLSLQELVLSGNPLHCS 118 (347)
T ss_dssp SCCCSTTTCSCCCCEEECCSSCCCCC
T ss_pred ceeCHHHcccCCceEEEeeCCCccCC
Confidence 98777643333388888888888743
No 377
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.29 E-value=2.7e-12 Score=143.64 Aligned_cols=142 Identities=24% Similarity=0.341 Sum_probs=102.6
Q ss_pred CCCCCCCCCCCCcccE--------EecCCCCeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCC
Q 006903 51 GWNRSSDPCSGKWVGV--------TCDSRQKSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCK 122 (626)
Q Consensus 51 ~w~~~~~~c~~~w~gv--------~c~~~~~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~ 122 (626)
.|....++| .|.|. .|.. ..++.|++++|+|+ .+|. .+. ++|+.|+|++|+|+ .+|. .++
T Consensus 14 ~W~~~~~~~--~~~~r~~~~~~~~~c~~--~~l~~L~ls~n~L~-~lp~-~l~--~~L~~L~L~~N~l~-~lp~---~l~ 81 (622)
T 3g06_A 14 AWRRAAPAE--ESRGRAAVVQKMRACLN--NGNAVLNVGESGLT-TLPD-CLP--AHITTLVIPDNNLT-SLPA---LPP 81 (622)
T ss_dssp HHHHTCCGG--GHHHHHHHHHHHHHHHH--HCCCEEECCSSCCS-CCCS-CCC--TTCSEEEECSCCCS-CCCC---CCT
T ss_pred HHHhcCCcc--hhccccccCcccccccC--CCCcEEEecCCCcC-ccCh-hhC--CCCcEEEecCCCCC-CCCC---cCC
Confidence 476556777 68654 2332 34788999999998 5554 333 78999999999988 4676 578
Q ss_pred CCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCCCCCCccEEEccCCc
Q 006903 123 QLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSNNN 202 (626)
Q Consensus 123 ~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~N~ 202 (626)
+|++|+|++|+|+ .+|. .+++|++|+|++|++++..+ .+++|+.|++++|++++ +|. .+++|+.|++++|+
T Consensus 82 ~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~l~~---~l~~L~~L~L~~N~l~~-lp~-~l~~L~~L~Ls~N~ 152 (622)
T 3g06_A 82 ELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTHLPA---LPSGLCKLWIFGNQLTS-LPV-LPPGLQELSVSDNQ 152 (622)
T ss_dssp TCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCCCCC---CCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSC
T ss_pred CCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCCCCC---CCCCcCEEECCCCCCCc-CCC-CCCCCCEEECcCCc
Confidence 8999999999987 4776 67888999999998887443 55778888888888875 554 35778888888888
Q ss_pred CCCCCCCCCCCC
Q 006903 203 LSGPVPGVNGRL 214 (626)
Q Consensus 203 l~g~ip~~~~~~ 214 (626)
+++ +|..+..+
T Consensus 153 l~~-l~~~~~~L 163 (622)
T 3g06_A 153 LAS-LPALPSEL 163 (622)
T ss_dssp CSC-CCCCCTTC
T ss_pred CCC-cCCccCCC
Confidence 775 44443333
No 378
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.25 E-value=5.9e-13 Score=140.85 Aligned_cols=150 Identities=18% Similarity=0.223 Sum_probs=108.8
Q ss_pred CeEEEEEecCCCceeccC---ccccCCC---------CCccEEEcccCCCc-ccCC---ccccCCCCCcEEEeeccccc-
Q 006903 73 KSVRKIVLDGFNLSGILD---TTSVCKT---------QSLVVLSLEENNIA-GTVS---QEISNCKQLTHLYVGRNKLS- 135 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~---~~~~~~l---------~~L~~L~ls~N~l~-g~~p---~~~~~l~~L~~L~l~~N~l~- 135 (626)
.+++.|+|++|++++..+ +..+..+ ++|+.|+|++|+++ +.+| ..+..+++|++|+|++|+++
T Consensus 122 ~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~ 201 (386)
T 2ca6_A 122 TPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRP 201 (386)
T ss_dssp TTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCH
T ss_pred CCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCH
Confidence 568889999998864221 1234444 78889999999987 4555 46678888999999999887
Q ss_pred -c---ccChhhhcCCCCCeEEccCCcCC----ccCCC-ccCcCCCcEEEcCCCccccc----CCCC----CCCCccEEEc
Q 006903 136 -G---NLPDSLSKLNNLKRLDISNNNFS----SELPD-LSRISGLLTFFAENNQLRGG----IPEF----DFSNLLQFNV 198 (626)
Q Consensus 136 -g---~ip~~~~~l~~L~~L~ls~N~l~----g~~p~-~~~~~~L~~l~l~~N~l~g~----ip~~----~~~~L~~l~l 198 (626)
| .+|..+..+++|+.|+|++|.|+ +.+|. +..+++|+.|++++|.+++. +|.. .+++|+.|++
T Consensus 202 ~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L 281 (386)
T 2ca6_A 202 EGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRL 281 (386)
T ss_dssp HHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEEC
T ss_pred hHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEEC
Confidence 3 34557888889999999999986 55665 77888899999999988865 4432 3788899999
Q ss_pred cCCcCCC----CCCCCC----CCCcccCCCCC
Q 006903 199 SNNNLSG----PVPGVN----GRLGADSFSGN 222 (626)
Q Consensus 199 s~N~l~g----~ip~~~----~~~~~~~~~gn 222 (626)
++|.+++ .+|..+ .++....+.+|
T Consensus 282 ~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N 313 (386)
T 2ca6_A 282 QYNEIELDAVRTLKTVIDEKMPDLLFLELNGN 313 (386)
T ss_dssp CSSCCBHHHHHHHHHHHHHHCTTCCEEECTTS
T ss_pred cCCcCCHHHHHHHHHHHHhcCCCceEEEccCC
Confidence 9998887 466543 23333444454
No 379
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.25 E-value=1.4e-11 Score=128.56 Aligned_cols=146 Identities=14% Similarity=0.101 Sum_probs=107.5
Q ss_pred CCCCcccEEecCCC---------CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCc-cccCCCCCcE-E
Q 006903 59 CSGKWVGVTCDSRQ---------KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQ-EISNCKQLTH-L 127 (626)
Q Consensus 59 c~~~w~gv~c~~~~---------~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~l~~L~~-L 127 (626)
|.-.|..|.|++.. ..++.|+|++|+|+. +|+..+..+++|+.|+|++|++.+.+|. .|.++++|.. +
T Consensus 7 C~C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~-i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l 85 (350)
T 4ay9_X 7 CHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRV-IQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIR 85 (350)
T ss_dssp SEEETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSE-ECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEE
T ss_pred cEeeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCC-cCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhh
Confidence 53368889997542 358899999999985 5555688999999999999999887875 5678888765 6
Q ss_pred EeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCCC----CCCccEEEccCCc
Q 006903 128 YVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEFD----FSNLLQFNVSNNN 202 (626)
Q Consensus 128 ~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~~----~~~L~~l~ls~N~ 202 (626)
++++|++++..|..|..+++|++|++++|.+++..+. +.....+..+++++|.--..+|... ...++.|++++|.
T Consensus 86 ~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~ 165 (350)
T 4ay9_X 86 IEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNG 165 (350)
T ss_dssp EEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSC
T ss_pred cccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccc
Confidence 7778999977778889999999999999999876664 4455566667775543333444322 2346667777777
Q ss_pred CCC
Q 006903 203 LSG 205 (626)
Q Consensus 203 l~g 205 (626)
++.
T Consensus 166 i~~ 168 (350)
T 4ay9_X 166 IQE 168 (350)
T ss_dssp CCE
T ss_pred ccC
Confidence 763
No 380
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.24 E-value=4e-13 Score=139.06 Aligned_cols=126 Identities=22% Similarity=0.216 Sum_probs=71.2
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCccc-CCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGT-VSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~-~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.++.|+|++|.+.+.++. +..+++|+.|+|++|.+++. +|..+..+++|++|+|++|.+++.+|..++++++|++|+
T Consensus 71 ~l~~L~l~~n~l~~~~~~--~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 71 GVIAFRCPRSFMDQPLAE--HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TCSEEECTTCEECSCCCS--CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred cceEEEcCCccccccchh--hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 455666666666655432 44556666666666666554 555556666666666666666655666666666666666
Q ss_pred ccCC-cCCcc-CCC-ccCcCCCcEEEcCCC-ccccc-CCCC--CCC-CccEEEccCC
Q 006903 153 ISNN-NFSSE-LPD-LSRISGLLTFFAENN-QLRGG-IPEF--DFS-NLLQFNVSNN 201 (626)
Q Consensus 153 ls~N-~l~g~-~p~-~~~~~~L~~l~l~~N-~l~g~-ip~~--~~~-~L~~l~ls~N 201 (626)
|++| .+++. +|. +..+++|+.|++++| .+++. +|.. .++ +|+.|++++|
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~ 205 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY 205 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSC
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCC
Confidence 6666 45542 343 455556666666666 55542 2221 244 5555555555
No 381
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.24 E-value=2.6e-11 Score=135.68 Aligned_cols=137 Identities=26% Similarity=0.311 Sum_probs=72.0
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeecccccc--ccChhhhcC------
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSG--NLPDSLSKL------ 145 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g--~ip~~~~~l------ 145 (626)
+++.|+|++|+|++. |. .+++|+.|+|++|++++ +|.. +++|++|+|++|++++ ..|..+..|
T Consensus 102 ~L~~L~Ls~N~l~~l-~~----~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l~~~~~~L~~L~L~~N~ 172 (622)
T 3g06_A 102 GLLELSIFSNPLTHL-PA----LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASLPALPSELCKLWAYNNQ 172 (622)
T ss_dssp TCCEEEECSCCCCCC-CC----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCCCCCCTTCCEEECCSSC
T ss_pred CCCEEECcCCcCCCC-CC----CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCcCCccCCCCEEECCCCC
Confidence 344455555554442 11 33455555555555553 4432 2455555555555553 111222222
Q ss_pred --------CCCCeEEccCCcCCccCCC---ccC--------------cCCCcEEEcCCCcccccCCCCCCCCccEEEccC
Q 006903 146 --------NNLKRLDISNNNFSSELPD---LSR--------------ISGLLTFFAENNQLRGGIPEFDFSNLLQFNVSN 200 (626)
Q Consensus 146 --------~~L~~L~ls~N~l~g~~p~---~~~--------------~~~L~~l~l~~N~l~g~ip~~~~~~L~~l~ls~ 200 (626)
++|+.|+|++|+|++..+. +.. +++|+.|++++|++++ +| ..+++|+.|++++
T Consensus 173 l~~l~~~~~~L~~L~Ls~N~l~~l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~L~~-lp-~~l~~L~~L~Ls~ 250 (622)
T 3g06_A 173 LTSLPMLPSGLQELSVSDNQLASLPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTS-LP-VLPSELKELMVSG 250 (622)
T ss_dssp CSCCCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSSCCCCCTTCCEEECCSSCCSC-CC-CCCTTCCEEECCS
T ss_pred CCCCcccCCCCcEEECCCCCCCCCCCccchhhEEECcCCcccccCCCCCCCCEEEccCCccCc-CC-CCCCcCcEEECCC
Confidence 6667777777776652211 111 2567777777777775 55 4456777777777
Q ss_pred CcCCCCCCCCCCCCcccCCCCC
Q 006903 201 NNLSGPVPGVNGRLGADSFSGN 222 (626)
Q Consensus 201 N~l~g~ip~~~~~~~~~~~~gn 222 (626)
|.|+ .+|..+.++....+.+|
T Consensus 251 N~L~-~lp~~~~~L~~L~Ls~N 271 (622)
T 3g06_A 251 NRLT-SLPMLPSGLLSLSVYRN 271 (622)
T ss_dssp SCCS-CCCCCCTTCCEEECCSS
T ss_pred CCCC-cCCcccccCcEEeCCCC
Confidence 7777 45554444444444444
No 382
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.23 E-value=1.9e-11 Score=127.27 Aligned_cols=103 Identities=19% Similarity=0.198 Sum_probs=90.4
Q ss_pred EEEcccC-CCcccCCccccCCCCCcEEEeec-cccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCC
Q 006903 102 VLSLEEN-NIAGTVSQEISNCKQLTHLYVGR-NKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAEN 178 (626)
Q Consensus 102 ~L~ls~N-~l~g~~p~~~~~l~~L~~L~l~~-N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~ 178 (626)
.+++++| +|++ ||. |..+++|+.|+|++ |+|++..|..|+.|++|+.|||++|+|++.+|. |.++++|+.|+|++
T Consensus 12 ~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4688888 8985 898 99999999999996 999988778899999999999999999999987 89999999999999
Q ss_pred CcccccCCCC-CCCCccEEEccCCcCCCC
Q 006903 179 NQLRGGIPEF-DFSNLLQFNVSNNNLSGP 206 (626)
Q Consensus 179 N~l~g~ip~~-~~~~L~~l~ls~N~l~g~ 206 (626)
|+|++..|.. ...+|+.|++++|.|...
T Consensus 90 N~l~~~~~~~~~~~~L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 90 NALESLSWKTVQGLSLQELVLSGNPLHCS 118 (347)
T ss_dssp SCCSCCCSTTTCSCCCCEEECCSSCCCCC
T ss_pred CccceeCHHHcccCCceEEEeeCCCccCC
Confidence 9999655442 233499999999999754
No 383
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.22 E-value=1.4e-11 Score=115.07 Aligned_cols=111 Identities=16% Similarity=0.179 Sum_probs=93.8
Q ss_pred ccCCCCCccEEEcccCCCcccCCccccCCC-CCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCC
Q 006903 93 SVCKTQSLVVLSLEENNIAGTVSQEISNCK-QLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISG 170 (626)
Q Consensus 93 ~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~-~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~ 170 (626)
....+.+|+.|+|++|+++. +|. +..+. +|++|+|++|.+++. +.+..+++|++|+|++|.|++..|. +..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 35567899999999999995 564 55555 999999999999974 6799999999999999999987666 489999
Q ss_pred CcEEEcCCCcccccCCC---C-CCCCccEEEccCCcCCCCCCC
Q 006903 171 LLTFFAENNQLRGGIPE---F-DFSNLLQFNVSNNNLSGPVPG 209 (626)
Q Consensus 171 L~~l~l~~N~l~g~ip~---~-~~~~L~~l~ls~N~l~g~ip~ 209 (626)
|+.|++++|+++ .+|. . .+++|+.|++++|.++ .+|.
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~ 130 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKH 130 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTT
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHh
Confidence 999999999995 5564 2 5889999999999997 3443
No 384
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.19 E-value=2e-13 Score=130.45 Aligned_cols=124 Identities=23% Similarity=0.337 Sum_probs=107.8
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEE
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLD 152 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ 152 (626)
.+++.|+|++|++++ +| .+..+++|+.|+|++|.++ .+|..+..+++|++|+|++|++++ +| .+..+++|+.|+
T Consensus 48 ~~L~~L~ls~n~l~~-l~--~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~ 121 (198)
T 1ds9_A 48 KACKHLALSTNNIEK-IS--SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLY 121 (198)
T ss_dssp TTCSEEECSEEEESC-CC--CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEE
T ss_pred CCCCEEECCCCCCcc-cc--ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEE
Confidence 478999999999988 54 6888999999999999999 689888889999999999999996 56 799999999999
Q ss_pred ccCCcCCccCC--CccCcCCCcEEEcCCCcccccCCC------------CCCCCccEEEccCCcCC
Q 006903 153 ISNNNFSSELP--DLSRISGLLTFFAENNQLRGGIPE------------FDFSNLLQFNVSNNNLS 204 (626)
Q Consensus 153 ls~N~l~g~~p--~~~~~~~L~~l~l~~N~l~g~ip~------------~~~~~L~~l~ls~N~l~ 204 (626)
|++|++++..+ .+..+++|+.|++++|.+++.+|. ..+++|+.|| +|.++
T Consensus 122 l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 122 MSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp ESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 99999997443 588999999999999999998775 1478899886 55554
No 385
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.18 E-value=2.3e-12 Score=133.28 Aligned_cols=138 Identities=17% Similarity=0.222 Sum_probs=90.6
Q ss_pred CeEEEEEecCCCceec-cCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeecc-ccccc-cChhhhcCCCCC
Q 006903 73 KSVRKIVLDGFNLSGI-LDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRN-KLSGN-LPDSLSKLNNLK 149 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~-~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N-~l~g~-ip~~~~~l~~L~ 149 (626)
.+++.|+|++|.+++. ++ ..+..+++|+.|+|++|.+++.+|..+..+++|++|+|++| .+++. +|..+.++++|+
T Consensus 93 ~~L~~L~L~~~~l~~~~~~-~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~ 171 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLH-GILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 171 (336)
T ss_dssp BCCCEEECTTCEECHHHHH-HHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCEEEccCCCcCHHHHH-HHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCC
Confidence 4567777777776654 43 24566777777777777777777777777777777777777 56652 666677777777
Q ss_pred eEEccCC-cCCcc-CCC-ccCcC-CCcEEEcCCC--ccc-ccCCCC--CCCCccEEEccCCc-CCCCCCCCC
Q 006903 150 RLDISNN-NFSSE-LPD-LSRIS-GLLTFFAENN--QLR-GGIPEF--DFSNLLQFNVSNNN-LSGPVPGVN 211 (626)
Q Consensus 150 ~L~ls~N-~l~g~-~p~-~~~~~-~L~~l~l~~N--~l~-g~ip~~--~~~~L~~l~ls~N~-l~g~ip~~~ 211 (626)
+|+|++| .+++. +|. +..++ +|++|++++| .++ +.+|.. .+++|+.|++++|. +++..+..+
T Consensus 172 ~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l 243 (336)
T 2ast_B 172 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEF 243 (336)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGG
T ss_pred EEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHH
Confidence 7777777 77654 444 56666 7777777777 444 334432 36677777777777 555555443
No 386
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.16 E-value=2.5e-12 Score=136.00 Aligned_cols=110 Identities=19% Similarity=0.269 Sum_probs=52.8
Q ss_pred CCCCCccEEEcccCCCcc----cCCccccCCCCCcEEEeeccccccccChhh----hcC---------CCCCeEEccCCc
Q 006903 95 CKTQSLVVLSLEENNIAG----TVSQEISNCKQLTHLYVGRNKLSGNLPDSL----SKL---------NNLKRLDISNNN 157 (626)
Q Consensus 95 ~~l~~L~~L~ls~N~l~g----~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~----~~l---------~~L~~L~ls~N~ 157 (626)
..+++|+.|+|++|.+++ .+|..+.++++|++|+|++|.+++..+..+ ..+ ++|++|+|++|+
T Consensus 91 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~ 170 (386)
T 2ca6_A 91 LKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNR 170 (386)
T ss_dssp TTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSC
T ss_pred hhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCC
Confidence 345555555555555554 344455555555555555555543322222 222 555555555555
Q ss_pred CC-ccCCC----ccCcCCCcEEEcCCCccc--c---cCC-CC-CCCCccEEEccCCcCC
Q 006903 158 FS-SELPD----LSRISGLLTFFAENNQLR--G---GIP-EF-DFSNLLQFNVSNNNLS 204 (626)
Q Consensus 158 l~-g~~p~----~~~~~~L~~l~l~~N~l~--g---~ip-~~-~~~~L~~l~ls~N~l~ 204 (626)
++ +.+|. +..+++|+.|++++|+++ | .+| .. .+++|+.|++++|.++
T Consensus 171 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~ 229 (386)
T 2ca6_A 171 LENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFT 229 (386)
T ss_dssp CTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCH
T ss_pred CCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCC
Confidence 54 33331 334455555555555554 2 122 11 2445555555555553
No 387
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.14 E-value=8.1e-11 Score=117.31 Aligned_cols=136 Identities=14% Similarity=0.052 Sum_probs=105.3
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCC-CCCccccceEEEeCCeEEEEEeecCCCChh
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVK-HPNVLPPLAYYCSKQEKLLVYEYQPNGSLF 429 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~ 429 (626)
..++.|+.+.||++... ++.+++|...... .....+.+|+++++.+. |..+.++++++...+..|+||||++|.+|.
T Consensus 20 ~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 98 (263)
T 3tm0_A 20 KDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCS 98 (263)
T ss_dssp ECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHH
T ss_pred eeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehh
Confidence 45777888999999854 6889999987532 23346889999998884 677888999988888999999999999998
Q ss_pred HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhc---------------------------------------------
Q 006903 430 NLLHGSENGQSFDWGSRLRVAACVAKALALIHEEL--------------------------------------------- 464 (626)
Q Consensus 430 ~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~--------------------------------------------- 464 (626)
+.+.. ......++.+++++|+.||..-
T Consensus 99 ~~~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 170 (263)
T 3tm0_A 99 EEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPREL 170 (263)
T ss_dssp HHCCT--------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHH
T ss_pred hccCC--------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHH
Confidence 76421 1123478889999999999710
Q ss_pred ----------cCCCceeccCCCCCeeeCCCCCeEEeeccCcc
Q 006903 465 ----------REDGIAHGNLKSNNILFNNNMEPCISEYGLIV 496 (626)
Q Consensus 465 ----------~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~ 496 (626)
....++|+|++|.|||++++..+.|.||+.+.
T Consensus 171 ~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 171 YDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01458999999999999876556799998753
No 388
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.13 E-value=1.8e-11 Score=128.21 Aligned_cols=135 Identities=25% Similarity=0.262 Sum_probs=78.2
Q ss_pred eEEEEEecCCCceeccCc---cccCCCC-CccEEEcccCCCcccCCccccCC-----CCCcEEEeeccccccccChhhhc
Q 006903 74 SVRKIVLDGFNLSGILDT---TSVCKTQ-SLVVLSLEENNIAGTVSQEISNC-----KQLTHLYVGRNKLSGNLPDSLSK 144 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~---~~~~~l~-~L~~L~ls~N~l~g~~p~~~~~l-----~~L~~L~l~~N~l~g~ip~~~~~ 144 (626)
.++.|+|++|.+++..+. ..+..++ +|+.|+|++|.+++..+..+..+ ++|++|+|++|++++..+..+..
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 366677777766553320 2344555 67777777777766656555543 66777777777776655554433
Q ss_pred ----C-CCCCeEEccCCcCCccCCC-c----cC-cCCCcEEEcCCCcccccCCCC------CC-CCccEEEccCCcCCCC
Q 006903 145 ----L-NNLKRLDISNNNFSSELPD-L----SR-ISGLLTFFAENNQLRGGIPEF------DF-SNLLQFNVSNNNLSGP 206 (626)
Q Consensus 145 ----l-~~L~~L~ls~N~l~g~~p~-~----~~-~~~L~~l~l~~N~l~g~ip~~------~~-~~L~~l~ls~N~l~g~ 206 (626)
+ ++|++|||++|.|++..+. + .. .++|++|++++|++++..+.. .+ ++|+.|++++|.+++.
T Consensus 103 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~ 182 (362)
T 3goz_A 103 TLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASK 182 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGS
T ss_pred HHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchh
Confidence 2 6677777777776655442 2 22 246677777777666432211 22 2667777777766654
Q ss_pred CC
Q 006903 207 VP 208 (626)
Q Consensus 207 ip 208 (626)
.+
T Consensus 183 ~~ 184 (362)
T 3goz_A 183 NC 184 (362)
T ss_dssp CH
T ss_pred hH
Confidence 44
No 389
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.12 E-value=1e-11 Score=130.21 Aligned_cols=127 Identities=20% Similarity=0.201 Sum_probs=68.1
Q ss_pred EEecCCCceeccCccccCCCCCccEEEcccCCCcccCC----ccccCCC-CCcEEEeeccccccccChhhhcC-----CC
Q 006903 78 IVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVS----QEISNCK-QLTHLYVGRNKLSGNLPDSLSKL-----NN 147 (626)
Q Consensus 78 l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p----~~~~~l~-~L~~L~l~~N~l~g~ip~~~~~l-----~~ 147 (626)
.+|+.|+++|.+|. .+...++|+.|+|++|.+++..+ ..+.+++ +|++|+|++|++++..+..+..+ ++
T Consensus 3 ~~ls~n~~~~~~~~-~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 3 YKLTLHPGSNPVEE-FTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EECCCCTTCCHHHH-HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred cccccccchHHHHH-HHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 34555666655542 33444446666666666655444 4445555 56666666666655555555543 56
Q ss_pred CCeEEccCCcCCccCCC-----ccCc-CCCcEEEcCCCcccccCCCC------C-CCCccEEEccCCcCCC
Q 006903 148 LKRLDISNNNFSSELPD-----LSRI-SGLLTFFAENNQLRGGIPEF------D-FSNLLQFNVSNNNLSG 205 (626)
Q Consensus 148 L~~L~ls~N~l~g~~p~-----~~~~-~~L~~l~l~~N~l~g~ip~~------~-~~~L~~l~ls~N~l~g 205 (626)
|++|||++|.+++..+. +..+ ++|+.|++++|++++..+.. . .++|+.|++++|.+++
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 152 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGI 152 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGG
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCH
Confidence 66666666666555443 2222 55666666666665443321 1 2356666666666553
No 390
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.11 E-value=3.4e-10 Score=117.93 Aligned_cols=142 Identities=11% Similarity=0.019 Sum_probs=94.0
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccE-EEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCC-----
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVV-LSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLN----- 146 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~-L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~----- 146 (626)
.+++.|+|++|.+.+.++...+..+++|+. +.++.|+++...|..|.++++|++|++++|++++..+..+....
T Consensus 54 ~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l 133 (350)
T 4ay9_X 54 GDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLL 133 (350)
T ss_dssp TTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEE
T ss_pred CCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhh
Confidence 578899999999888887766777777654 66777888877777888888999999988888754443333322
Q ss_pred ---------------------CCCeEEccCCcCCccCCCccCcCCCcEEEcCCCcccccCCCC---CCCCccEEEccCCc
Q 006903 147 ---------------------NLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLRGGIPEF---DFSNLLQFNVSNNN 202 (626)
Q Consensus 147 ---------------------~L~~L~ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~g~ip~~---~~~~L~~l~ls~N~ 202 (626)
.|+.|+|++|+|+...+.+....+|+.+++++|+..+.||.. .+++|+.|++++|+
T Consensus 134 ~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~ 213 (350)
T 4ay9_X 134 DIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTR 213 (350)
T ss_dssp EEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSC
T ss_pred hhccccccccccccchhhcchhhhhhccccccccCCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCC
Confidence 355566666666654444445556666666655444556653 35567777777777
Q ss_pred CCCCCCCCCCCC
Q 006903 203 LSGPVPGVNGRL 214 (626)
Q Consensus 203 l~g~ip~~~~~~ 214 (626)
|+.-.+..+..+
T Consensus 214 l~~lp~~~~~~L 225 (350)
T 4ay9_X 214 IHSLPSYGLENL 225 (350)
T ss_dssp CCCCCSSSCTTC
T ss_pred cCccChhhhccc
Confidence 764333333333
No 391
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.06 E-value=2.8e-10 Score=112.87 Aligned_cols=129 Identities=13% Similarity=0.143 Sum_probs=96.2
Q ss_pred ccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCC--ccccceEEEeCCeEEEEEeecCCCChhHhh
Q 006903 355 GRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPN--VLPPLAYYCSKQEKLLVYEYQPNGSLFNLL 432 (626)
Q Consensus 355 G~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~n--Iv~l~g~~~~~~~~~lv~Ey~~~g~L~~~l 432 (626)
+.|..+.||++...+|..+++|..... ....+.+|++.++.+.+.+ +.+++++....+..++||||++|.++. .
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~ 104 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--S 104 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--T
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--c
Confidence 355569999998877888999997653 3356788999988886544 455788877777889999999998884 2
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhc------------------------------------------------
Q 006903 433 HGSENGQSFDWGSRLRVAACVAKALALIHEEL------------------------------------------------ 464 (626)
Q Consensus 433 ~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~------------------------------------------------ 464 (626)
.. .+ ...++.++++.|..||..-
T Consensus 105 ~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 175 (264)
T 1nd4_A 105 SH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLK 175 (264)
T ss_dssp SC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHH
T ss_pred Cc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHH
Confidence 11 11 2356777888888888421
Q ss_pred ------cCCCceeccCCCCCeeeCCCCCeEEeeccCcc
Q 006903 465 ------REDGIAHGNLKSNNILFNNNMEPCISEYGLIV 496 (626)
Q Consensus 465 ------~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~ 496 (626)
....++|+|++|.||+++++..+.|.|||.+.
T Consensus 176 ~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 176 ARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 01239999999999999887666799999864
No 392
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.97 E-value=1.3e-09 Score=113.83 Aligned_cols=140 Identities=13% Similarity=0.205 Sum_probs=104.5
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcC--CCC--CCHHHHHHHHHHhccCC--CCCccccceEEEeC---CeEEEEEee
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLR--DWS--ISSEDFKNRMQKIDHVK--HPNVLPPLAYYCSK---QEKLLVYEY 422 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~--~~~--~~~~~~~~ei~~l~~l~--H~nIv~l~g~~~~~---~~~~lv~Ey 422 (626)
+.++.|.++.||+....+ ..+++|+.. ... .....+.+|+++++.+. +..+.+++.++.+. +..++||||
T Consensus 44 ~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 568999999999998764 578888876 332 23456888999998887 45577888877665 458999999
Q ss_pred cCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhc--------------------------------------
Q 006903 423 QPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEEL-------------------------------------- 464 (626)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~-------------------------------------- 464 (626)
++|..+.+.. ...++...+..++.++++.|+.||..-
T Consensus 123 v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 123 VSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp CCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred cCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 9998775422 124678888999999999999999620
Q ss_pred ----------------cCCCceeccCCCCCeeeCCCCC--eEEeeccCccc
Q 006903 465 ----------------REDGIAHGNLKSNNILFNNNME--PCISEYGLIVT 497 (626)
Q Consensus 465 ----------------~~~~ivHrDlkp~NILl~~~~~--~kl~DFGl~~~ 497 (626)
....++|+|+++.|||++.++. +.|.||+.+..
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 0256999999999999997753 58999998754
No 393
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.95 E-value=2.2e-11 Score=120.88 Aligned_cols=127 Identities=21% Similarity=0.244 Sum_probs=69.9
Q ss_pred CCCCCCcccEEecCCCCeEEEEEecC---CCceeccCccccC-----------------------CCCCccE--EEcccC
Q 006903 57 DPCSGKWVGVTCDSRQKSVRKIVLDG---FNLSGILDTTSVC-----------------------KTQSLVV--LSLEEN 108 (626)
Q Consensus 57 ~~c~~~w~gv~c~~~~~~v~~l~L~~---~~l~g~~~~~~~~-----------------------~l~~L~~--L~ls~N 108 (626)
..| +|.|+.|+....+|..+...+ ..+.|.+.+..+. ..+.|.. ++++.|
T Consensus 76 ~l~--~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N 153 (267)
T 3rw6_A 76 ALK--AVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLN 153 (267)
T ss_dssp HHH--HTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHHHHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTT
T ss_pred HHH--hcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHHHHHhccchhccccCHHHcCCCcchhhcCccccCC
Confidence 357 699999987666776666655 3344444432211 1112222 334444
Q ss_pred CCc---ccCCccccCCCCCcEEEeecccccc--ccChhhhcCCCCCeEEccCCcCCccCCCccCcC--CCcEEEcCCCcc
Q 006903 109 NIA---GTVSQEISNCKQLTHLYVGRNKLSG--NLPDSLSKLNNLKRLDISNNNFSSELPDLSRIS--GLLTFFAENNQL 181 (626)
Q Consensus 109 ~l~---g~~p~~~~~l~~L~~L~l~~N~l~g--~ip~~~~~l~~L~~L~ls~N~l~g~~p~~~~~~--~L~~l~l~~N~l 181 (626)
... +.++....++++|+.|+|++|+|++ .+|..+..+++|+.|||++|+|++. ..+..+. +|+.|++++|.+
T Consensus 154 ~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~-~~l~~l~~l~L~~L~L~~Npl 232 (267)
T 3rw6_A 154 RRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE-RELDKIKGLKLEELWLDGNSL 232 (267)
T ss_dssp SHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG-GGGGGGTTSCCSEEECTTSTT
T ss_pred HHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc-hhhhhcccCCcceEEccCCcC
Confidence 211 1111111346667777777777766 5556666677777777777777654 2222222 666666666666
Q ss_pred cccCC
Q 006903 182 RGGIP 186 (626)
Q Consensus 182 ~g~ip 186 (626)
.+.+|
T Consensus 233 ~~~~~ 237 (267)
T 3rw6_A 233 CDTFR 237 (267)
T ss_dssp GGGCS
T ss_pred ccccC
Confidence 66665
No 394
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.93 E-value=4e-11 Score=129.63 Aligned_cols=138 Identities=18% Similarity=0.178 Sum_probs=102.8
Q ss_pred CeEEEEEecCCCceecc----CccccCCCCCccEEEcccCCCccc----CCccccCCCCCcEEEeeccccccccChhhhc
Q 006903 73 KSVRKIVLDGFNLSGIL----DTTSVCKTQSLVVLSLEENNIAGT----VSQEISNCKQLTHLYVGRNKLSGNLPDSLSK 144 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~----~~~~~~~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~ 144 (626)
.+++.|+|++|.+++.- .+.....+++|+.|+|++|++++. +|..+.++++|++|+|++|.+++..+..+..
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 56888999999887531 111223578899999999999875 6777788899999999999987665555543
Q ss_pred C-----CCCCeEEccCCcCCcc----CCC-ccCcCCCcEEEcCCCcccccCCCC-------CCCCccEEEccCCcCCC--
Q 006903 145 L-----NNLKRLDISNNNFSSE----LPD-LSRISGLLTFFAENNQLRGGIPEF-------DFSNLLQFNVSNNNLSG-- 205 (626)
Q Consensus 145 l-----~~L~~L~ls~N~l~g~----~p~-~~~~~~L~~l~l~~N~l~g~ip~~-------~~~~L~~l~ls~N~l~g-- 205 (626)
. ++|+.|+|++|.+++. +|. +..+++|+.|++++|.+++..+.. ..++|+.|++++|.+++
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~ 386 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSS 386 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHH
T ss_pred HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhh
Confidence 3 6899999999998875 333 567788999999999887654331 15688999999998876
Q ss_pred --CCCCC
Q 006903 206 --PVPGV 210 (626)
Q Consensus 206 --~ip~~ 210 (626)
.+|..
T Consensus 387 ~~~l~~~ 393 (461)
T 1z7x_W 387 CSSLAAT 393 (461)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 56654
No 395
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.86 E-value=2.7e-10 Score=123.09 Aligned_cols=134 Identities=16% Similarity=0.178 Sum_probs=94.2
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcc----cCCccccCCCCCcEEEeeccccccccChhhh-cCC-
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAG----TVSQEISNCKQLTHLYVGRNKLSGNLPDSLS-KLN- 146 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g----~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~-~l~- 146 (626)
.+++.|+|++++++.......+..+++|+.|+|++|++++ .+|..+..+++|++|+|++|.++...+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 3678888888887654322225567788888888888875 3566677788888888888888765555543 355
Q ss_pred ---CCCeEEccCCcCCc----cCCC-ccCcCCCcEEEcCCCcccccCCCC-------CCCCccEEEccCCcCCCC
Q 006903 147 ---NLKRLDISNNNFSS----ELPD-LSRISGLLTFFAENNQLRGGIPEF-------DFSNLLQFNVSNNNLSGP 206 (626)
Q Consensus 147 ---~L~~L~ls~N~l~g----~~p~-~~~~~~L~~l~l~~N~l~g~ip~~-------~~~~L~~l~ls~N~l~g~ 206 (626)
+|++|+|++|+++. .+|. +..+++|+.|++++|.+++..+.. ..++|+.|++++|.+++.
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~ 157 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAA 157 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGG
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHH
Confidence 68888888888874 4454 777888888888888877543321 244688888888887753
No 396
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.84 E-value=2.5e-10 Score=119.96 Aligned_cols=133 Identities=17% Similarity=0.163 Sum_probs=84.6
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccc-----cCCCCCcEEEeecccccc----ccChhhh
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEI-----SNCKQLTHLYVGRNKLSG----NLPDSLS 143 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~-----~~l~~L~~L~l~~N~l~g----~ip~~~~ 143 (626)
..++.|+|++|+++..-.......+++|+.|+|++|+++......+ ...++|++|+|++|.|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 3677888888877542211112234567888888887765433333 245678888888888764 3445556
Q ss_pred cCCCCCeEEccCCcCCccC----CC-ccCcCCCcEEEcCCCcccccC----CCC--CCCCccEEEccCCcCCC
Q 006903 144 KLNNLKRLDISNNNFSSEL----PD-LSRISGLLTFFAENNQLRGGI----PEF--DFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 144 ~l~~L~~L~ls~N~l~g~~----p~-~~~~~~L~~l~l~~N~l~g~i----p~~--~~~~L~~l~ls~N~l~g 205 (626)
.+++|++|||++|.|+..- +. +...++|+.|++++|.++..- +.. ..++|+.|++++|.++.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 7778888888888876431 22 555667888888888876421 111 24678888888887753
No 397
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.69 E-value=1.1e-08 Score=104.30 Aligned_cols=184 Identities=17% Similarity=0.208 Sum_probs=116.5
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCC-CCCc--cccceEEEeCC---eEEEEEeecCC
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK-HPNV--LPPLAYYCSKQ---EKLLVYEYQPN 425 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~-H~nI--v~l~g~~~~~~---~~~lv~Ey~~~ 425 (626)
+.++.|.+..||+.. ..+++|..... .....+.+|.+.++.+. +..+ .+.+......+ ..|+||||++|
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G 100 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKG 100 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCC
Confidence 568999999999864 45888886532 23457889999998874 3332 23333322222 34889999999
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh------------------------------------------
Q 006903 426 GSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEE------------------------------------------ 463 (626)
Q Consensus 426 g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~------------------------------------------ 463 (626)
.++.+... ..++..++..++.++++.++.||..
T Consensus 101 ~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 101 VPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp EECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred eECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 88765332 2356777788888888888888851
Q ss_pred -----cc-------CCCceeccCCCCCeeeCC--CCCeEEeeccCccccCCCccccccccc---cchh---hccccC-CC
Q 006903 464 -----LR-------EDGIAHGNLKSNNILFNN--NMEPCISEYGLIVTENHDQSFLAQTSS---LKIN---DISNQM-CS 522 (626)
Q Consensus 464 -----~~-------~~~ivHrDlkp~NILl~~--~~~~kl~DFGl~~~~~~~~~~~~~~~~---~~~p---e~~~~~-~~ 522 (626)
+. ...++|+|++|.||++++ ...+.|.||+.+............... +..+ ...... ..
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~ 255 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHK 255 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCS
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCC
Confidence 10 135899999999999998 456789999987543221110000000 1110 000000 00
Q ss_pred ---------CCcchhHHHHHHHHHHHcCCCCC
Q 006903 523 ---------TIKADVYGFGVILLELLTGKLVQ 545 (626)
Q Consensus 523 ---------~~k~DVwSfGvvl~elltg~~p~ 545 (626)
....+.|+++.++|++.+|..++
T Consensus 256 ~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 256 DIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 11258999999999999998654
No 398
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.60 E-value=3.5e-09 Score=118.14 Aligned_cols=87 Identities=14% Similarity=0.079 Sum_probs=40.8
Q ss_pred ccCCCCCcEEEeec--cccccccChhhhc-CCCCCeEEccCCcCCc-cCCC-ccCcCCCcEEEcCCCccccc-CCCC--C
Q 006903 118 ISNCKQLTHLYVGR--NKLSGNLPDSLSK-LNNLKRLDISNNNFSS-ELPD-LSRISGLLTFFAENNQLRGG-IPEF--D 189 (626)
Q Consensus 118 ~~~l~~L~~L~l~~--N~l~g~ip~~~~~-l~~L~~L~ls~N~l~g-~~p~-~~~~~~L~~l~l~~N~l~g~-ip~~--~ 189 (626)
+.++++|+.|+|++ |.+++..+..+.. +++|++|+|++|++++ .++. +..+++|+.|++++|.+++. ++.. .
T Consensus 432 ~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~ 511 (592)
T 3ogk_B 432 LIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTK 511 (592)
T ss_dssp HHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHH
T ss_pred HHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHh
Confidence 33445555555542 2244444444432 5555555555555554 2233 34455555555555555433 2211 2
Q ss_pred CCCccEEEccCCcCC
Q 006903 190 FSNLLQFNVSNNNLS 204 (626)
Q Consensus 190 ~~~L~~l~ls~N~l~ 204 (626)
+++|+.|++++|+++
T Consensus 512 l~~L~~L~ls~n~it 526 (592)
T 3ogk_B 512 LPSLRYLWVQGYRAS 526 (592)
T ss_dssp CSSCCEEEEESCBCC
T ss_pred cCccCeeECcCCcCC
Confidence 455555555555554
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.54 E-value=3e-09 Score=111.61 Aligned_cols=133 Identities=17% Similarity=0.163 Sum_probs=98.4
Q ss_pred CeEEEEEecCCCceeccCc---cccC-CCCCccEEEcccCCCcccCCccc-cCCCCCcEEEeeccccccccChhhh----
Q 006903 73 KSVRKIVLDGFNLSGILDT---TSVC-KTQSLVVLSLEENNIAGTVSQEI-SNCKQLTHLYVGRNKLSGNLPDSLS---- 143 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~---~~~~-~l~~L~~L~ls~N~l~g~~p~~~-~~l~~L~~L~l~~N~l~g~ip~~~~---- 143 (626)
..++.|+|++|.++..-.. ..+. ...+|+.|+|++|.++......+ ..+++|+.|+|++|+|+..-...+.
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 4688999999999753211 1122 33689999999999976544344 3567899999999999865444442
Q ss_pred -cCCCCCeEEccCCcCCcc----CCC-ccCcCCCcEEEcCCCcccccC----CC--CCCCCccEEEccCCcCCC
Q 006903 144 -KLNNLKRLDISNNNFSSE----LPD-LSRISGLLTFFAENNQLRGGI----PE--FDFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 144 -~l~~L~~L~ls~N~l~g~----~p~-~~~~~~L~~l~l~~N~l~g~i----p~--~~~~~L~~l~ls~N~l~g 205 (626)
..++|+.|+|++|.|+.. ++. +...++|++|++++|.++..- +. ...++|+.|++++|.++.
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~ 225 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGD 225 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCH
Confidence 468999999999999752 222 567889999999999997531 21 135689999999999874
No 400
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.46 E-value=1e-07 Score=94.49 Aligned_cols=78 Identities=23% Similarity=0.353 Sum_probs=64.3
Q ss_pred CCCCccEEEcccCCCcc--cCCccccCCCCCcEEEeeccccccccChhhhcCC--CCCeEEccCCcCCccCCC-------
Q 006903 96 KTQSLVVLSLEENNIAG--TVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLN--NLKRLDISNNNFSSELPD------- 164 (626)
Q Consensus 96 ~l~~L~~L~ls~N~l~g--~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~--~L~~L~ls~N~l~g~~p~------- 164 (626)
.+++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+++.+|.
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~ 245 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISA 245 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHH
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHH
Confidence 57899999999999998 6777788999999999999999975 4466565 999999999999998873
Q ss_pred -ccCcCCCcEEE
Q 006903 165 -LSRISGLLTFF 175 (626)
Q Consensus 165 -~~~~~~L~~l~ 175 (626)
+..+++|+.||
T Consensus 246 il~~~P~L~~LD 257 (267)
T 3rw6_A 246 IRERFPKLLRLD 257 (267)
T ss_dssp HHHHCTTCCEES
T ss_pred HHHHCcccCeEC
Confidence 34556665554
No 401
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.36 E-value=1.2e-07 Score=105.54 Aligned_cols=135 Identities=12% Similarity=0.081 Sum_probs=84.9
Q ss_pred eEEEEEecCCC-cee-ccCccccCCCCCccEEEcccCCCccc----CCccccCCCCCcEEEeeccccc----cccChhhh
Q 006903 74 SVRKIVLDGFN-LSG-ILDTTSVCKTQSLVVLSLEENNIAGT----VSQEISNCKQLTHLYVGRNKLS----GNLPDSLS 143 (626)
Q Consensus 74 ~v~~l~L~~~~-l~g-~~~~~~~~~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~----g~ip~~~~ 143 (626)
+++.|+|+++. ++. .++ .....+++|+.|+|++|.+++. ++..+.++++|++|+|++|.++ +.++..+.
T Consensus 139 ~L~~L~L~~~~~~~~~~l~-~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~ 217 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLL-SIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIAR 217 (592)
T ss_dssp GCCEEEEESCEEEEHHHHH-HHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHH-HHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHh
Confidence 38888888775 221 111 1223678888888888888765 4445567788888888888887 45566667
Q ss_pred cCCCCCeEEccCCcCCccCCCccCcCCCcEEEcCCCccc---ccCCC--CCCCCccEEEccCCcCCCCCCCC
Q 006903 144 KLNNLKRLDISNNNFSSELPDLSRISGLLTFFAENNQLR---GGIPE--FDFSNLLQFNVSNNNLSGPVPGV 210 (626)
Q Consensus 144 ~l~~L~~L~ls~N~l~g~~p~~~~~~~L~~l~l~~N~l~---g~ip~--~~~~~L~~l~ls~N~l~g~ip~~ 210 (626)
++++|+.|+|++|.+++....+..+++|+.|+++.+... +..+. ..+++|+.|+++++ ..+.+|..
T Consensus 218 ~~~~L~~L~L~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~-~~~~l~~~ 288 (592)
T 3ogk_B 218 NCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYM-GPNEMPIL 288 (592)
T ss_dssp HCTTCCEEECSSCBGGGGHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTC-CTTTGGGG
T ss_pred hCCCCcEEeccCccHHHHHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCcccc-chhHHHHH
Confidence 888888888888888773333667777777777643222 11111 13456666666653 23344443
No 402
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.31 E-value=9.6e-07 Score=90.47 Aligned_cols=133 Identities=13% Similarity=0.130 Sum_probs=95.6
Q ss_pred ccccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCC---C-CccccceEEEeCCeEEEEEeecCCC
Q 006903 351 AELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKH---P-NVLPPLAYYCSKQEKLLVYEYQPNG 426 (626)
Q Consensus 351 ~~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H---~-nIv~l~g~~~~~~~~~lv~Ey~~~g 426 (626)
.+.++.|....||+. |..+++|..... .....+.+|.++++.+.+ + .+.+++++ +..++||||++|.
T Consensus 42 v~~l~~G~~n~vy~v----g~~~vlR~~~~~-~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~ 112 (320)
T 3r70_A 42 LRYLSSGDDSDTFLC----NEQYVVKVPKRD-SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGE 112 (320)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSH-HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCB
T ss_pred EEeCCCCCCceEEEE----CCEEEEEeCCcH-HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCc
Confidence 467899999999998 667888876432 123468899988888865 1 22333333 5678999999998
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcc-----------------------------------------
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELR----------------------------------------- 465 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~----------------------------------------- 465 (626)
++.+... ..++..++..++.++++.++.||..-.
T Consensus 113 ~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (320)
T 3r70_A 113 RITYEQY-----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLE 187 (320)
T ss_dssp CCCHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHHH
T ss_pred ccccccc-----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccchH
Confidence 8864332 235666677788888888888884211
Q ss_pred ------------------CCCceeccCCCCCeeeCCCCCeEEeeccCccc
Q 006903 466 ------------------EDGIAHGNLKSNNILFNNNMEPCISEYGLIVT 497 (626)
Q Consensus 466 ------------------~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~ 497 (626)
...++|+|++|.|||++.+..+.|.||+.+..
T Consensus 188 ~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 188 HIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 12359999999999999866678999998754
No 403
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.27 E-value=1.9e-07 Score=87.76 Aligned_cols=110 Identities=17% Similarity=0.236 Sum_probs=61.5
Q ss_pred cCCCCCccEEEcccC-CCccc----CCccccCCCCCcEEEeecccccc----ccChhhhcCCCCCeEEccCCcCCcc---
Q 006903 94 VCKTQSLVVLSLEEN-NIAGT----VSQEISNCKQLTHLYVGRNKLSG----NLPDSLSKLNNLKRLDISNNNFSSE--- 161 (626)
Q Consensus 94 ~~~l~~L~~L~ls~N-~l~g~----~p~~~~~l~~L~~L~l~~N~l~g----~ip~~~~~l~~L~~L~ls~N~l~g~--- 161 (626)
+...++|+.|+|++| .++.. +...+...++|++|+|++|+++. .+...+...+.|++|||++|.|+..
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~ 111 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 111 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHH
Confidence 344556666666666 65532 22334555666666666666643 2334445556677777777766542
Q ss_pred -C-CCccCcCCCcEEEc--CCCcccccCCC----C--CCCCccEEEccCCcC
Q 006903 162 -L-PDLSRISGLLTFFA--ENNQLRGGIPE----F--DFSNLLQFNVSNNNL 203 (626)
Q Consensus 162 -~-p~~~~~~~L~~l~l--~~N~l~g~ip~----~--~~~~L~~l~ls~N~l 203 (626)
+ ..+...+.|++|++ ++|.++..-.. . ..++|+.|++++|.+
T Consensus 112 ~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 112 ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 1 12455556677777 56666532111 0 245677777777765
No 404
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.26 E-value=3.2e-06 Score=86.83 Aligned_cols=37 Identities=8% Similarity=0.329 Sum_probs=25.9
Q ss_pred CeEEEEEecCCCceeccCccccCCCCCccEEEcccCCCc
Q 006903 73 KSVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIA 111 (626)
Q Consensus 73 ~~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~ 111 (626)
.+++.|+|++ +++. |+...+..+++|+.|+|++|.+.
T Consensus 101 ~~L~~l~L~~-~i~~-I~~~aF~~~~~L~~l~l~~n~i~ 137 (329)
T 3sb4_A 101 QTLEKVILSE-KIKN-IEDAAFKGCDNLKICQIRKKTAP 137 (329)
T ss_dssp TTCCC-CBCT-TCCE-ECTTTTTTCTTCCEEEBCCSSCC
T ss_pred CCCcEEECCc-cccc-hhHHHhhcCcccceEEcCCCCcc
Confidence 4577788877 6664 44456777888888888888764
No 405
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.25 E-value=3e-06 Score=85.38 Aligned_cols=73 Identities=25% Similarity=0.267 Sum_probs=58.7
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCC---CccccceEEEeCCeEEEEEeecCCCC
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHP---NVLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~---nIv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
+.|+.|.++.||++...+|+.++||+..... .....|.+|++.|+.++|. .+.+++++. ..++||||++++.
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~ 96 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCC
Confidence 5799999999999999899999999975432 2346789999999999876 466666642 4689999999987
Q ss_pred h
Q 006903 428 L 428 (626)
Q Consensus 428 L 428 (626)
+
T Consensus 97 ~ 97 (288)
T 3d1u_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 5
No 406
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.21 E-value=6.4e-08 Score=107.80 Aligned_cols=132 Identities=10% Similarity=0.077 Sum_probs=77.8
Q ss_pred CeEEEEEec---------CCCceeccCccccCCCCCccEEEcccCCCcccCCcccc-CCCCCcEEEee--c----ccccc
Q 006903 73 KSVRKIVLD---------GFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEIS-NCKQLTHLYVG--R----NKLSG 136 (626)
Q Consensus 73 ~~v~~l~L~---------~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~-~l~~L~~L~l~--~----N~l~g 136 (626)
.+++.|+|. .+.+++.........+++|+.|+++.|++++..+..+. ++++|+.|+|+ + |++++
T Consensus 338 ~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~ 417 (594)
T 2p1m_B 338 KDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTL 417 (594)
T ss_dssp TTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTC
T ss_pred CCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccC
Confidence 457777773 23444321111112366777777777777766555554 47777777777 3 55552
Q ss_pred -----ccChhhhcCCCCCeEEccCCcCCccCCC-ccC-cCCCcEEEcCCCcccccCCCC---CCCCccEEEccCCcCCC
Q 006903 137 -----NLPDSLSKLNNLKRLDISNNNFSSELPD-LSR-ISGLLTFFAENNQLRGGIPEF---DFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 137 -----~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~-~~~L~~l~l~~N~l~g~ip~~---~~~~L~~l~ls~N~l~g 205 (626)
.++..+..+++|+.|+|++ ++++..+. +.. +++|+.|++++|.+++..+.. .+++|+.|++++|.+++
T Consensus 418 ~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~ 495 (594)
T 2p1m_B 418 EPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGD 495 (594)
T ss_dssp CCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCH
T ss_pred CchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcH
Confidence 2223356677777777766 55543332 443 667777777777776543321 36777777777777743
No 407
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.17 E-value=4.6e-06 Score=84.81 Aligned_cols=136 Identities=15% Similarity=0.085 Sum_probs=92.1
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCC---CccccceEEE-eCCeEEEEEeecCCCC
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHP---NVLPPLAYYC-SKQEKLLVYEYQPNGS 427 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~---nIv~l~g~~~-~~~~~~lv~Ey~~~g~ 427 (626)
+.++.|....||+. |..+++|.-.. ......+.+|.++|+.+.+. .+.+.+.+.. ..+..++||||++|..
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~-~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~ 99 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS-QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQI 99 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS-HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC-chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeE
Confidence 56788888899987 56688888532 12235788999999988753 2445555553 3455789999999988
Q ss_pred hhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhc-------------------------------------------
Q 006903 428 LFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEEL------------------------------------------- 464 (626)
Q Consensus 428 L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~------------------------------------------- 464 (626)
+.+... ..++...+..++.++++.|+.||..-
T Consensus 100 l~~~~~-----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 174 (306)
T 3tdw_A 100 LGEDGM-----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTL 174 (306)
T ss_dssp CHHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred Cchhhh-----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 766321 12344455555566666665555310
Q ss_pred -------------cCCCceeccCCCCCeeeCC---CCCe-EEeeccCccc
Q 006903 465 -------------REDGIAHGNLKSNNILFNN---NMEP-CISEYGLIVT 497 (626)
Q Consensus 465 -------------~~~~ivHrDlkp~NILl~~---~~~~-kl~DFGl~~~ 497 (626)
....++|+|+++.||+++. ++.+ .|.||+.+..
T Consensus 175 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 175 RFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1335799999999999997 4554 7999997643
No 408
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.03 E-value=6.2e-07 Score=84.14 Aligned_cols=110 Identities=17% Similarity=0.199 Sum_probs=84.8
Q ss_pred CeEEEEEecCC-Cceec--c-CccccCCCCCccEEEcccCCCccc----CCccccCCCCCcEEEeeccccccc----cCh
Q 006903 73 KSVRKIVLDGF-NLSGI--L-DTTSVCKTQSLVVLSLEENNIAGT----VSQEISNCKQLTHLYVGRNKLSGN----LPD 140 (626)
Q Consensus 73 ~~v~~l~L~~~-~l~g~--~-~~~~~~~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g~----ip~ 140 (626)
..++.|+|++| ++... . -...+...++|+.|+|++|+++.. +...+...+.|++|+|++|.++.. +..
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~ 115 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 115 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHH
Confidence 57899999999 88632 1 012455678899999999999753 334456678999999999999754 556
Q ss_pred hhhcCCCCCeEEc--cCCcCCccCC-----CccCcCCCcEEEcCCCccc
Q 006903 141 SLSKLNNLKRLDI--SNNNFSSELP-----DLSRISGLLTFFAENNQLR 182 (626)
Q Consensus 141 ~~~~l~~L~~L~l--s~N~l~g~~p-----~~~~~~~L~~l~l~~N~l~ 182 (626)
.+...+.|++|+| ++|.|+..-- .+...++|+.|++++|.+.
T Consensus 116 ~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 116 ALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 6788899999999 8899975421 2555688999999999885
No 409
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.98 E-value=1.2e-05 Score=83.76 Aligned_cols=73 Identities=10% Similarity=0.006 Sum_probs=54.0
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCC--ccccceEEEeC-CeEEEEEeecCCCCh
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPN--VLPPLAYYCSK-QEKLLVYEYQPNGSL 428 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~n--Iv~l~g~~~~~-~~~~lv~Ey~~~g~L 428 (626)
+.++.|....+|+... ++..+++|..... ..+.+|...++.+.... +.++++++... +..|+||||+++..+
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~l 121 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSCA----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTL 121 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESCC----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEET
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCch----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCCc
Confidence 5688899999999886 4788999987532 36888988888876543 34556655554 568999999997655
Q ss_pred h
Q 006903 429 F 429 (626)
Q Consensus 429 ~ 429 (626)
.
T Consensus 122 ~ 122 (362)
T 3ovc_A 122 Q 122 (362)
T ss_dssp T
T ss_pred c
Confidence 3
No 410
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.97 E-value=2.1e-06 Score=95.48 Aligned_cols=104 Identities=14% Similarity=0.151 Sum_probs=77.5
Q ss_pred CCCCccEEEcccCCCcccCCcccc-CCCCCcEEEeecc-ccccc-cChhhhcCCCCCeEEccCCcCCccCCC-----ccC
Q 006903 96 KTQSLVVLSLEENNIAGTVSQEIS-NCKQLTHLYVGRN-KLSGN-LPDSLSKLNNLKRLDISNNNFSSELPD-----LSR 167 (626)
Q Consensus 96 ~l~~L~~L~ls~N~l~g~~p~~~~-~l~~L~~L~l~~N-~l~g~-ip~~~~~l~~L~~L~ls~N~l~g~~p~-----~~~ 167 (626)
.+++|+.|+|++|.+++..+..+. .+++|+.|+|++| .++.. ++..+.++++|++|+|++|.+++..+. ...
T Consensus 103 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~ 182 (594)
T 2p1m_B 103 SYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDT 182 (594)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTT
T ss_pred hCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhc
Confidence 567899999999988887777775 6889999999988 55433 555556889999999999988765432 236
Q ss_pred cCCCcEEEcCCCcccccCCCC-------CCCCccEEEccCC
Q 006903 168 ISGLLTFFAENNQLRGGIPEF-------DFSNLLQFNVSNN 201 (626)
Q Consensus 168 ~~~L~~l~l~~N~l~g~ip~~-------~~~~L~~l~ls~N 201 (626)
+++|+.|++++|. +.++.. .+++|+.|++++|
T Consensus 183 ~~~L~~L~l~~~~--~~~~~~~l~~l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 183 YTSLVSLNISCLA--SEVSFSALERLVTRCPNLKSLKLNRA 221 (594)
T ss_dssp CCCCCEEECTTCC--SCCCHHHHHHHHHHCTTCCEEECCTT
T ss_pred CCcCcEEEecccC--CcCCHHHHHHHHHhCCCCcEEecCCC
Confidence 6789999998886 233221 3688899998887
No 411
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=97.96 E-value=1.9e-05 Score=78.43 Aligned_cols=136 Identities=16% Similarity=0.240 Sum_probs=93.4
Q ss_pred cccccCCCc-ceEEEEeC-CCcEEEEEEcCCCCCCHHHHHHHHHHhccCC-CCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 352 ELLGRGKHG-SLYRVVLD-DGLMLAVKRLRDWSISSEDFKNRMQKIDHVK-HPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 352 ~~lG~G~fG-~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~-H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
+.+..|..| .||+.... ++..+.+|+-... ...++.+|...|+.+. +--+-++++++.+.+..++|||++++.++
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 345556666 58988754 4667889976432 2456788988887764 22356678888888899999999999887
Q ss_pred hHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh---------------------------------------------
Q 006903 429 FNLLHGSENGQSFDWGSRLRVAACVAKALALIHEE--------------------------------------------- 463 (626)
Q Consensus 429 ~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~--------------------------------------------- 463 (626)
.+.... .......++.+++..|+-||..
T Consensus 108 ~~~~~~-------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (272)
T 4gkh_A 108 FQVLEE-------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVW 180 (272)
T ss_dssp HHHHHH-------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHH
T ss_pred cccccC-------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHH
Confidence 765431 1122334556666666666631
Q ss_pred ------c---cCCCceeccCCCCCeeeCCCCCeEEeeccCcc
Q 006903 464 ------L---REDGIAHGNLKSNNILFNNNMEPCISEYGLIV 496 (626)
Q Consensus 464 ------~---~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~ 496 (626)
. ....++|+|+.+.|||+++++.+-|.||+.+.
T Consensus 181 ~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 181 KEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 0 01137999999999999987767799998764
No 412
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.89 E-value=6.1e-05 Score=77.25 Aligned_cols=141 Identities=13% Similarity=0.243 Sum_probs=80.9
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCC-----CCCccccc-e--EEEeCCeEEEEEeec
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK-----HPNVLPPL-A--YYCSKQEKLLVYEYQ 423 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~-----H~nIv~l~-g--~~~~~~~~~lv~Ey~ 423 (626)
+.|+.|..+.||+....+| .+++|+... ...++..|..+++.+. .|.++... | +....+..+++|||+
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~---~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHR---PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECS---CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCC---CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 4566677899999987665 488998875 2344445555554442 34444321 1 123456789999999
Q ss_pred CCCChh--------------HhhcC----CC-C-C-----CCCCHHHHH-------------------------------
Q 006903 424 PNGSLF--------------NLLHG----SE-N-G-----QSFDWGSRL------------------------------- 447 (626)
Q Consensus 424 ~~g~L~--------------~~l~~----~~-~-~-----~~l~~~~~~------------------------------- 447 (626)
+|..+. ..+|. .. . . ..-.|....
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 986542 11121 00 0 0 012343211
Q ss_pred HHHHHHHHHHHHHHH--------h-ccCCCceeccCCCCCeeeCCCCCeEEeeccCcc
Q 006903 448 RVAACVAKALALIHE--------E-LREDGIAHGNLKSNNILFNNNMEPCISEYGLIV 496 (626)
Q Consensus 448 ~i~~~ia~gL~ylH~--------~-~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~ 496 (626)
.+...+.+++.+|+. . .....++|+|+++.|||++.++.+.|.||+.+.
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 011123345666653 1 025789999999999999888889999998753
No 413
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.88 E-value=1.3e-05 Score=83.06 Aligned_cols=79 Identities=8% Similarity=-0.019 Sum_probs=54.3
Q ss_pred ccc-ccCCCcceEEEEeC-------CCcEEEEEEcCCCC---C-CHHHHHHHHHHhccCCC---CCccccceEEEeC---
Q 006903 352 ELL-GRGKHGSLYRVVLD-------DGLMLAVKRLRDWS---I-SSEDFKNRMQKIDHVKH---PNVLPPLAYYCSK--- 413 (626)
Q Consensus 352 ~~l-G~G~fG~Vy~~~~~-------~g~~vAvK~l~~~~---~-~~~~~~~ei~~l~~l~H---~nIv~l~g~~~~~--- 413 (626)
+.| +.|....+|+.... ++..+++|...... . ....+.+|+.+++.+.. -.+.+++.++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 567 88889999998764 26788899865432 1 23567788888877742 2456667766544
Q ss_pred CeEEEEEeecCCCChhH
Q 006903 414 QEKLLVYEYQPNGSLFN 430 (626)
Q Consensus 414 ~~~~lv~Ey~~~g~L~~ 430 (626)
+..++||||++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 34689999999876543
No 414
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.87 E-value=5.2e-06 Score=86.37 Aligned_cols=109 Identities=16% Similarity=0.181 Sum_probs=67.1
Q ss_pred cCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhh--cCCCCCeEEccC--CcCCcc--C----C
Q 006903 94 VCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLS--KLNNLKRLDISN--NNFSSE--L----P 163 (626)
Q Consensus 94 ~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~--~l~~L~~L~ls~--N~l~g~--~----p 163 (626)
+..+++|+.|+|++|.- -.+|. +. +++|+.|+|..+.++...-..+. .+++|+.|+|+. |+..|. + +
T Consensus 168 l~~~P~L~~L~L~g~~~-l~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~ 244 (362)
T 2ra8_A 168 LDAMPLLNNLKIKGTNN-LSIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRP 244 (362)
T ss_dssp HHTCTTCCEEEEECCBT-CBCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGG
T ss_pred HhcCCCCcEEEEeCCCC-ceecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHH
Confidence 34567788888877631 12443 33 67788888887777644434444 678888888753 332222 1 1
Q ss_pred Cc--cCcCCCcEEEcCCCcccccCCC-----CCCCCccEEEccCCcCCC
Q 006903 164 DL--SRISGLLTFFAENNQLRGGIPE-----FDFSNLLQFNVSNNNLSG 205 (626)
Q Consensus 164 ~~--~~~~~L~~l~l~~N~l~g~ip~-----~~~~~L~~l~ls~N~l~g 205 (626)
.+ ..+++|+.|++.+|.+....+. ..+++|+.|+++.|.+++
T Consensus 245 ~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 245 LFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp GSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBH
T ss_pred HHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCCh
Confidence 12 2467788888888877643321 136778888888887765
No 415
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.84 E-value=1.3e-05 Score=83.39 Aligned_cols=127 Identities=17% Similarity=0.222 Sum_probs=77.9
Q ss_pred CeEEEEEecCCC-ceeccCccccCCCCCccEEEcccCCCcccCCcccc--CCCCCcEEEeec--cccccc-----cChhh
Q 006903 73 KSVRKIVLDGFN-LSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEIS--NCKQLTHLYVGR--NKLSGN-----LPDSL 142 (626)
Q Consensus 73 ~~v~~l~L~~~~-l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~--~l~~L~~L~l~~--N~l~g~-----ip~~~ 142 (626)
++++.|+|+++. + .+++ + .+++|+.|+|..|.++......+. .+++|+.|+|+. |...|. +...+
T Consensus 172 P~L~~L~L~g~~~l--~l~~--~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l 246 (362)
T 2ra8_A 172 PLLNNLKIKGTNNL--SIGK--K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLF 246 (362)
T ss_dssp TTCCEEEEECCBTC--BCCS--C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGS
T ss_pred CCCcEEEEeCCCCc--eecc--c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHH
Confidence 467778887762 2 2222 2 367788888887776544333343 678888888763 222222 11112
Q ss_pred --hcCCCCCeEEccCCcCCccCCC-c---cCcCCCcEEEcCCCccccc----CCCC--CCCCccEEEccCCcCC
Q 006903 143 --SKLNNLKRLDISNNNFSSELPD-L---SRISGLLTFFAENNQLRGG----IPEF--DFSNLLQFNVSNNNLS 204 (626)
Q Consensus 143 --~~l~~L~~L~ls~N~l~g~~p~-~---~~~~~L~~l~l~~N~l~g~----ip~~--~~~~L~~l~ls~N~l~ 204 (626)
..+++|+.|+|++|.++...+. + ..+++|++|+++.|.+++. ++.. .+++|+.|++++|.++
T Consensus 247 ~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 247 SKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp CTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred hcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 2467888888888887654322 2 2467788888888887763 3322 3677888888877764
No 416
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=97.80 E-value=3.1e-05 Score=79.39 Aligned_cols=98 Identities=13% Similarity=0.097 Sum_probs=74.8
Q ss_pred CCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCC-eEEccCCcCCccCCC-ccCcCCCcEE
Q 006903 97 TQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLK-RLDISNNNFSSELPD-LSRISGLLTF 174 (626)
Q Consensus 97 l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~-~L~ls~N~l~g~~p~-~~~~~~L~~l 174 (626)
+++|+.|+|++|+++..-+..|.+|++|+.|+|++| ++..-+..|.++.+|+ .|+|.+ +++..-+. |..+++|+.+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 678999999998888655567889999999999988 6644445688899998 999988 66655444 8889999999
Q ss_pred EcCCCcccccCCCC---CCCCccEEE
Q 006903 175 FAENNQLRGGIPEF---DFSNLLQFN 197 (626)
Q Consensus 175 ~l~~N~l~g~ip~~---~~~~L~~l~ 197 (626)
++++|+++. |+.. .+++|+.+.
T Consensus 303 ~l~~n~i~~-I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 303 LATGDKITT-LGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECSSCCCE-ECTTTTCTTCCCCEEE
T ss_pred EeCCCccCc-cchhhhcCCcchhhhc
Confidence 998888873 4433 356676654
No 417
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.66 E-value=0.00016 Score=76.04 Aligned_cols=73 Identities=10% Similarity=0.169 Sum_probs=48.4
Q ss_pred cccccCCCcceEEEEeC-CCcEEEEEEcCCCC--------CCHHHHHHHHHHhccCCC--CCcc-ccceEEEeCCeEEEE
Q 006903 352 ELLGRGKHGSLYRVVLD-DGLMLAVKRLRDWS--------ISSEDFKNRMQKIDHVKH--PNVL-PPLAYYCSKQEKLLV 419 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--------~~~~~~~~ei~~l~~l~H--~nIv-~l~g~~~~~~~~~lv 419 (626)
+.||.|.++.||++... +++.++||...... ...+.+..|.++++.+.. |..+ +++. .+.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~--~d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFY--SDTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEE--EETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEE--EcCCccEEE
Confidence 57999999999999754 46889999764321 123456788888877632 3333 4443 245567899
Q ss_pred EeecCCC
Q 006903 420 YEYQPNG 426 (626)
Q Consensus 420 ~Ey~~~g 426 (626)
|||+++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999864
No 418
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.51 E-value=0.0004 Score=69.58 Aligned_cols=73 Identities=25% Similarity=0.274 Sum_probs=52.5
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCC-CCHHHHHHHHHHhccCCCCC---ccccceEEEeCCeEEEEEeecCCCC
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWS-ISSEDFKNRMQKIDHVKHPN---VLPPLAYYCSKQEKLLVYEYQPNGS 427 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~ei~~l~~l~H~n---Iv~l~g~~~~~~~~~lv~Ey~~~g~ 427 (626)
+.+|.|..+.||+..+.||+.|.+|+-.... .....|.+|...|+.+.-.. +.+.+++ +..++||||++.+.
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECCCCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEeecccC
Confidence 5689999999999999999999999876443 23356889999888774221 2233332 23478999998764
Q ss_pred h
Q 006903 428 L 428 (626)
Q Consensus 428 L 428 (626)
.
T Consensus 97 ~ 97 (288)
T 3f7w_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 3
No 419
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.48 E-value=0.00034 Score=70.94 Aligned_cols=138 Identities=16% Similarity=0.154 Sum_probs=90.3
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCC---CCCccccceEEEeCCeEEEEEeecCCCCh
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK---HPNVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~---H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
+.|+.|.+..+|+.... +..+++|..... ....+..|.+.|+.+. ...+.+++.+....+..++||||+++..+
T Consensus 42 ~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~ 118 (312)
T 3jr1_A 42 EKLYSGEMNEIWLINDE-VQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN 118 (312)
T ss_dssp EEECCSSSSEEEEEESS-SCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred EEeCCccceeeeEEEEC-CCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence 56899999999998864 667889987542 3567888988887774 35677888887777889999999998764
Q ss_pred hH-----------hhcCCCC--C-----------------CCCCHHHHH---HHHH--HH-----------HHHHHHHHH
Q 006903 429 FN-----------LLHGSEN--G-----------------QSFDWGSRL---RVAA--CV-----------AKALALIHE 462 (626)
Q Consensus 429 ~~-----------~l~~~~~--~-----------------~~l~~~~~~---~i~~--~i-----------a~gL~ylH~ 462 (626)
.. .||.... . ..-+|.... ++.. +. .+.++.+..
T Consensus 119 ~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~~ 198 (312)
T 3jr1_A 119 KQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVAD 198 (312)
T ss_dssp CTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 21 2232111 0 012465332 1111 11 112222222
Q ss_pred hc----cCCCceeccCCCCCeeeCCCCCeEEeecc
Q 006903 463 EL----REDGIAHGNLKSNNILFNNNMEPCISEYG 493 (626)
Q Consensus 463 ~~----~~~~ivHrDlkp~NILl~~~~~~kl~DFG 493 (626)
.+ ..+.+||+|+.+.|++++.++ +.|.||.
T Consensus 199 ~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 199 TLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 22 146799999999999999887 8898974
No 420
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.20 E-value=0.0011 Score=70.38 Aligned_cols=31 Identities=10% Similarity=0.322 Sum_probs=27.4
Q ss_pred CCCceeccCCCCCeeeCCCCCeEEeeccCccc
Q 006903 466 EDGIAHGNLKSNNILFNNNMEPCISEYGLIVT 497 (626)
Q Consensus 466 ~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~ 497 (626)
...++|+|++|.|||++.++ ++|.||+.+..
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~ 261 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY 261 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence 57899999999999999876 99999998754
No 421
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.11 E-value=0.0023 Score=65.08 Aligned_cols=142 Identities=13% Similarity=0.152 Sum_probs=83.4
Q ss_pred ccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCC--ccccceE-----EEeCCeEEEEEeecCC
Q 006903 353 LLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPN--VLPPLAY-----YCSKQEKLLVYEYQPN 425 (626)
Q Consensus 353 ~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~n--Iv~l~g~-----~~~~~~~~lv~Ey~~~ 425 (626)
.++ |....||+....+|+.+++|.........+.+..|..+++.+.... +.+++.. ....+..+++|||++|
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G 111 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG 111 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCC
Confidence 456 7788999988777878999998754445667778888777664211 3334332 2234567889999987
Q ss_pred CChh-----H------h---hcC----CC--CCCCCCHHHH----HHH---------------HHHHHHHHHHHHHhc--
Q 006903 426 GSLF-----N------L---LHG----SE--NGQSFDWGSR----LRV---------------AACVAKALALIHEEL-- 464 (626)
Q Consensus 426 g~L~-----~------~---l~~----~~--~~~~l~~~~~----~~i---------------~~~ia~gL~ylH~~~-- 464 (626)
..+. . . +|. .. ....+++... ..+ ...+...+..+....
T Consensus 112 ~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 191 (328)
T 1zyl_A 112 RQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWRE 191 (328)
T ss_dssp EECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 5432 0 0 111 00 0112333211 001 111122233343322
Q ss_pred -cCCCceeccCCCCCeeeCCCCCeEEeeccCccc
Q 006903 465 -REDGIAHGNLKSNNILFNNNMEPCISEYGLIVT 497 (626)
Q Consensus 465 -~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~ 497 (626)
....++|+|+++.|||++ + .+.|.||+.+..
T Consensus 192 ~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 192 DFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred cCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 245689999999999999 4 889999987643
No 422
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.05 E-value=0.0029 Score=66.50 Aligned_cols=121 Identities=14% Similarity=0.203 Sum_probs=73.4
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEc
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDI 153 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~l 153 (626)
.++.+.|.++ +. .|+...+..+++|+.++|..| ++..-...|.+ .+|+.+.| .|.++-.-+..|.+|++|+.+++
T Consensus 204 ~L~~l~lp~~-l~-~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l 278 (401)
T 4fdw_A 204 GIEEVLLPVT-LK-EIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTT 278 (401)
T ss_dssp CCSEEECCTT-CC-EECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEE
T ss_pred ccCEEEeCCc-hh-eehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEe
Confidence 4666777633 44 344445667778888888764 44333344555 67778877 34455333455777788888888
Q ss_pred cCCcCCc----cCCC--ccCcCCCcEEEcCCCcccccCCCC---CCCCccEEEccCC
Q 006903 154 SNNNFSS----ELPD--LSRISGLLTFFAENNQLRGGIPEF---DFSNLLQFNVSNN 201 (626)
Q Consensus 154 s~N~l~g----~~p~--~~~~~~L~~l~l~~N~l~g~ip~~---~~~~L~~l~ls~N 201 (626)
.+|.+.. .++. |..+++|+.+.+.++ ++ .|+.. .+++|+.+++..|
T Consensus 279 ~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~~-i~-~I~~~aF~~c~~L~~l~lp~~ 333 (401)
T 4fdw_A 279 YGSTFNDDPEAMIHPYCLEGCPKLARFEIPES-IR-ILGQGLLGGNRKVTQLTIPAN 333 (401)
T ss_dssp ESSCCCCCTTCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCCSCCEEEECTT
T ss_pred CCccccCCcccEECHHHhhCCccCCeEEeCCc-eE-EEhhhhhcCCCCccEEEECcc
Confidence 7777651 2332 677777777777743 33 34433 3566777777544
No 423
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.00 E-value=0.0025 Score=67.02 Aligned_cols=123 Identities=17% Similarity=0.201 Sum_probs=82.3
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEc
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDI 153 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~l 153 (626)
.++.|.|.+ ++.- |+...+..+.+|+.++|++|+++- ||...-.+.+|+.+.|..| ++-.-...|.++++|+.++|
T Consensus 158 ~L~~i~lp~-~l~~-I~~~aF~~c~~L~~l~l~~n~l~~-I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l 233 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQ-LKEDIFYYCYNLKKADLSKTKITK-LPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEI 233 (401)
T ss_dssp CCCEEECCT-TCCE-ECSSTTTTCTTCCEEECTTSCCSE-ECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEEC
T ss_pred CceEEEeCC-CccE-ehHHHhhCcccCCeeecCCCcceE-echhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEec
Confidence 477788875 5543 344467788999999999999885 5544444788999999854 65333456788899999998
Q ss_pred cCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC---CCCCccEEEccCCcCC
Q 006903 154 SNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF---DFSNLLQFNVSNNNLS 204 (626)
Q Consensus 154 s~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~---~~~~L~~l~ls~N~l~ 204 (626)
..| ++..-.. |.. .+|+.+.+.++ ++ .|+.. .+++|+.+++.+|.+.
T Consensus 234 ~~~-l~~I~~~aF~~-~~L~~i~lp~~-i~-~I~~~aF~~c~~L~~l~l~~~~~~ 284 (401)
T 4fdw_A 234 PEN-VSTIGQEAFRE-SGITTVKLPNG-VT-NIASRAFYYCPELAEVTTYGSTFN 284 (401)
T ss_dssp CTT-CCEECTTTTTT-CCCSEEEEETT-CC-EECTTTTTTCTTCCEEEEESSCCC
T ss_pred CCC-ccCcccccccc-CCccEEEeCCC-cc-EEChhHhhCCCCCCEEEeCCcccc
Confidence 875 4333232 444 67888877433 33 34332 4667888888777664
No 424
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.88 E-value=0.0019 Score=65.52 Aligned_cols=143 Identities=12% Similarity=0.157 Sum_probs=80.0
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCC-----CCCccccc-e--EEEeCCeEEEEEeec
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVK-----HPNVLPPL-A--YYCSKQEKLLVYEYQ 423 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~-----H~nIv~l~-g--~~~~~~~~~lv~Ey~ 423 (626)
+.|+.|....+|+....+| .+++|..... ...+++..|+.+++.+. -|.++... | +....+..+++|||+
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l 105 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFL 105 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeC
Confidence 4577788889999987666 5788987652 22345666777766553 23333211 1 112345678999999
Q ss_pred CCCChhH--------------hhcCC----CCCC-----CCCHHHHHH------------HHHHHHHHHHHHHHhcc---
Q 006903 424 PNGSLFN--------------LLHGS----ENGQ-----SFDWGSRLR------------VAACVAKALALIHEELR--- 465 (626)
Q Consensus 424 ~~g~L~~--------------~l~~~----~~~~-----~l~~~~~~~------------i~~~ia~gL~ylH~~~~--- 465 (626)
+|..+.. .+|.. .... ...|..... +...+...+.++++...
T Consensus 106 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~ 185 (322)
T 2ppq_A 106 EGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDL 185 (322)
T ss_dssp CCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSS
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcccC
Confidence 9865321 11110 0000 012332111 01124455666654321
Q ss_pred CCCceeccCCCCCeeeCCCCCeEEeeccCcc
Q 006903 466 EDGIAHGNLKSNNILFNNNMEPCISEYGLIV 496 (626)
Q Consensus 466 ~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~ 496 (626)
..+++|+|+.+.|||++++..+.|.||+.+.
T Consensus 186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 186 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 3479999999999999987656799998753
No 425
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.84 E-value=0.0018 Score=65.15 Aligned_cols=70 Identities=11% Similarity=0.011 Sum_probs=41.5
Q ss_pred cccccCCCcceEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCcc-ccceEEEeCCeEEEEEeec-CCCCh
Q 006903 352 ELLGRGKHGSLYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNVL-PPLAYYCSKQEKLLVYEYQ-PNGSL 428 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nIv-~l~g~~~~~~~~~lv~Ey~-~~g~L 428 (626)
+.|+.|....+|+. ..+++|+.........+..+|...++.+....+. +++++ ..+.-++++||+ ++.++
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQTM 95 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEEC
T ss_pred eEcCCcccccccee-----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCccC
Confidence 56888999999998 4588888764321112235677666655432333 44433 344467899999 55333
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.78 E-value=0.00069 Score=62.21 Aligned_cols=82 Identities=16% Similarity=0.075 Sum_probs=36.4
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCC-CcccCCccccCC----CCCcEEEeeccc-cccccChhhhcCCC
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENN-IAGTVSQEISNC----KQLTHLYVGRNK-LSGNLPDSLSKLNN 147 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~-l~g~~p~~~~~l----~~L~~L~l~~N~-l~g~ip~~~~~l~~ 147 (626)
+++.|||++..++..-- ..+..+++|+.|+|+++. ++..--..+..+ ++|++|+|+++. +|-.-=..+.++++
T Consensus 62 ~L~~LDLs~~~Itd~GL-~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGF-DHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CEEEEEEESCCCCGGGG-GGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred eEeEEeCcCCCccHHHH-HHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 45666666555432110 124455555555555553 433222223332 245555555542 43221123445555
Q ss_pred CCeEEccCC
Q 006903 148 LKRLDISNN 156 (626)
Q Consensus 148 L~~L~ls~N 156 (626)
|+.|+|++.
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 555555544
No 427
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.77 E-value=0.0019 Score=56.26 Aligned_cols=36 Identities=25% Similarity=0.353 Sum_probs=19.4
Q ss_pred CCcEEEeeccccccccChhhhcCCCCCeEEccCCcC
Q 006903 123 QLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNF 158 (626)
Q Consensus 123 ~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l 158 (626)
+|+.|+|++|+|+..-+..|..+++|+.|+|++|.+
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 355555555555532233345566666666666655
No 428
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.54 E-value=0.0085 Score=62.34 Aligned_cols=141 Identities=12% Similarity=0.146 Sum_probs=82.4
Q ss_pred cccccCCCcceEEEEeC--------CCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCc-cccceEEEeCCeEEEEEee
Q 006903 352 ELLGRGKHGSLYRVVLD--------DGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNV-LPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~--------~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nI-v~l~g~~~~~~~~~lv~Ey 422 (626)
+.+..|-...+|++... +++.+.+|+............+|.++++.+.-..+ .++++++. + .+||||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~--g~v~e~ 131 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFP--E--GRLEQY 131 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T--EEEEEC
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C--ccEEEE
Confidence 45777888899998865 24789999864433345677789988877743233 44555443 3 289999
Q ss_pred cCCCChhH-----------------hhcCCCC--CCCCC--HHHHHHHHHHHH-------------------HHHHHHHH
Q 006903 423 QPNGSLFN-----------------LLHGSEN--GQSFD--WGSRLRVAACVA-------------------KALALIHE 462 (626)
Q Consensus 423 ~~~g~L~~-----------------~l~~~~~--~~~l~--~~~~~~i~~~ia-------------------~gL~ylH~ 462 (626)
++|..|.. -||.... ..... |.+..++..++. ..+..|.+
T Consensus 132 i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~ 211 (379)
T 3feg_A 132 IPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRK 211 (379)
T ss_dssp CSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHH
T ss_pred ecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHH
Confidence 99754421 1122111 11222 444444544332 23445544
Q ss_pred hcc----CCCceeccCCCCCeeeCCC----CCeEEeeccCcc
Q 006903 463 ELR----EDGIAHGNLKSNNILFNNN----MEPCISEYGLIV 496 (626)
Q Consensus 463 ~~~----~~~ivHrDlkp~NILl~~~----~~~kl~DFGl~~ 496 (626)
.+. ...++|+|+.+.||+++.+ +.+.+.||..+.
T Consensus 212 ~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 212 LLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 331 2358999999999999876 688999998753
No 429
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.52 E-value=0.0086 Score=61.00 Aligned_cols=142 Identities=10% Similarity=0.044 Sum_probs=70.6
Q ss_pred cccccCCCcc-eEEEEeCCCcEEEEEEcCCCCCCHHHHHHHHHHhccCCCC--CccccceEEEeCCeEEEEEeecCCCCh
Q 006903 352 ELLGRGKHGS-LYRVVLDDGLMLAVKRLRDWSISSEDFKNRMQKIDHVKHP--NVLPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 352 ~~lG~G~fG~-Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~--nIv~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
+.|+.|.... +|+....+|..+++|...... .+++..|+.+++.+... .+.+++.+.... -+++||++.+..+
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~--~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~--g~ll~e~l~~~~l 99 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE--GGDTQPFVDLAQYLRNLDISAPEIYAEEHAR--GLLLIEDLGDALF 99 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT--TCCSHHHHHHHHHHHHTTCBCCCEEEEETTT--TEEEECCCCSCBH
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC--CccccHHHHHHHHHHhCCCCCCceeeecCCC--CEEEEeeCCCcch
Confidence 4465555544 677776546777787654322 13344556655555321 234455543222 3789999977666
Q ss_pred hHhhcC---------------------CCC--CCCCCHHHHH-------H-------------HHHHHHHHHHHHHHhc-
Q 006903 429 FNLLHG---------------------SEN--GQSFDWGSRL-------R-------------VAACVAKALALIHEEL- 464 (626)
Q Consensus 429 ~~~l~~---------------------~~~--~~~l~~~~~~-------~-------------i~~~ia~gL~ylH~~~- 464 (626)
.+++.. ... ...++..... . ....+...+..+.+..
T Consensus 100 ~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~ 179 (333)
T 3csv_A 100 TEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQL 179 (333)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 543321 000 0112211100 0 0011122233332111
Q ss_pred -cCCCceeccCCCCCeeeCCC----CCeEEeeccCccc
Q 006903 465 -REDGIAHGNLKSNNILFNNN----MEPCISEYGLIVT 497 (626)
Q Consensus 465 -~~~~ivHrDlkp~NILl~~~----~~~kl~DFGl~~~ 497 (626)
....++|+|+.+.||+++.+ ..+.|.||+.+..
T Consensus 180 ~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 180 EGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred cCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 24579999999999999874 6789999998654
No 430
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.51 E-value=0.0014 Score=60.25 Aligned_cols=83 Identities=10% Similarity=0.193 Sum_probs=64.6
Q ss_pred CCccEEEcccCCCcccCCccccCCCCCcEEEeeccc-cccccChhhhcC----CCCCeEEccCCc-CCcc-CCCccCcCC
Q 006903 98 QSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNK-LSGNLPDSLSKL----NNLKRLDISNNN-FSSE-LPDLSRISG 170 (626)
Q Consensus 98 ~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~-l~g~ip~~~~~l----~~L~~L~ls~N~-l~g~-~p~~~~~~~ 170 (626)
-.|+.|||+++.++..--..+..|++|+.|+|+++. ++..-=..++.+ ++|+.|||+++. +|.. +..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 359999999999886655668899999999999985 664333345554 479999999985 7642 344778999
Q ss_pred CcEEEcCCCc
Q 006903 171 LLTFFAENNQ 180 (626)
Q Consensus 171 L~~l~l~~N~ 180 (626)
|+.|+++++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 9999999874
No 431
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.36 E-value=0.0029 Score=65.61 Aligned_cols=72 Identities=8% Similarity=0.042 Sum_probs=42.0
Q ss_pred cccccCCCcceEEEEeCC---------CcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCc-cccceEEEeCCeEEEEEe
Q 006903 352 ELLGRGKHGSLYRVVLDD---------GLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNV-LPPLAYYCSKQEKLLVYE 421 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~---------g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nI-v~l~g~~~~~~~~~lv~E 421 (626)
..++.|....+|+....+ +..+++|+.........+...|.++++.+...++ .++++.. . -++|||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~e 114 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIEE 114 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEEE
Confidence 457788888999998654 2678888875432111124567777776643333 3555433 2 368999
Q ss_pred ecCCCC
Q 006903 422 YQPNGS 427 (626)
Q Consensus 422 y~~~g~ 427 (626)
|++|..
T Consensus 115 ~i~G~~ 120 (369)
T 3c5i_A 115 WLYGDP 120 (369)
T ss_dssp CCCSEE
T ss_pred EecCCc
Confidence 998754
No 432
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.31 E-value=0.0044 Score=53.94 Aligned_cols=56 Identities=27% Similarity=0.398 Sum_probs=40.0
Q ss_pred cEEEeeccccc-cccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCccc
Q 006903 125 THLYVGRNKLS-GNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLR 182 (626)
Q Consensus 125 ~~L~l~~N~l~-g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~ 182 (626)
..++.+++.|+ ..+|..+. ++|+.|||++|+|+...+. |..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 46777777775 35665432 4688999999999876665 677777777777777654
No 433
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.28 E-value=0.0014 Score=61.32 Aligned_cols=85 Identities=15% Similarity=0.276 Sum_probs=51.7
Q ss_pred CCCCCccEEEcccC-CCccc----CCccccCCCCCcEEEeecccccc----ccChhhhcCCCCCeEEccCCcCCccC---
Q 006903 95 CKTQSLVVLSLEEN-NIAGT----VSQEISNCKQLTHLYVGRNKLSG----NLPDSLSKLNNLKRLDISNNNFSSEL--- 162 (626)
Q Consensus 95 ~~l~~L~~L~ls~N-~l~g~----~p~~~~~l~~L~~L~l~~N~l~g----~ip~~~~~l~~L~~L~ls~N~l~g~~--- 162 (626)
..-+.|+.|+|++| ++... +-..+..-+.|+.|+|++|++.- .|-..+..-+.|+.|+|++|.|+..-
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~a 117 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 117 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHH
Confidence 34456777887775 55422 22344555678888888888752 23344556677888888888876421
Q ss_pred --CCccCcCCCcEEEcCCC
Q 006903 163 --PDLSRISGLLTFFAENN 179 (626)
Q Consensus 163 --p~~~~~~~L~~l~l~~N 179 (626)
..+..-+.|+.|++++|
T Consensus 118 la~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 118 LLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHTTTTCCCSEEECCCC
T ss_pred HHHHHhhCCceeEEECCCC
Confidence 11333455777777654
No 434
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=95.81 E-value=0.03 Score=59.24 Aligned_cols=71 Identities=8% Similarity=0.064 Sum_probs=48.0
Q ss_pred cccccCCCcceEEEEeCC--------CcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCc-cccceEEEeCCeEEEEEee
Q 006903 352 ELLGRGKHGSLYRVVLDD--------GLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNV-LPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nI-v~l~g~~~~~~~~~lv~Ey 422 (626)
+.|+.|....||++...+ +..+.+|+.... ...+.+.+|..+++.+...++ .++++.+. + .+||||
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~e~ 153 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLEEY 153 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEECC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEEEE
Confidence 567888889999998753 478999987432 222566788888887753344 45555432 2 389999
Q ss_pred cCCCC
Q 006903 423 QPNGS 427 (626)
Q Consensus 423 ~~~g~ 427 (626)
+++.+
T Consensus 154 l~G~~ 158 (429)
T 1nw1_A 154 IPSRP 158 (429)
T ss_dssp CCEEE
T ss_pred eCCcc
Confidence 98633
No 435
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.53 E-value=0.077 Score=54.13 Aligned_cols=32 Identities=16% Similarity=0.284 Sum_probs=27.4
Q ss_pred CCCceeccCCCCCeeeCCCCCeEEeeccCccc
Q 006903 466 EDGIAHGNLKSNNILFNNNMEPCISEYGLIVT 497 (626)
Q Consensus 466 ~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~ 497 (626)
...++|+|+.+.||++++++.+.+.||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 34699999999999999888899999987643
No 436
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=95.52 E-value=0.054 Score=57.75 Aligned_cols=73 Identities=8% Similarity=0.024 Sum_probs=45.9
Q ss_pred cccccCCCcceEEEEeCC-CcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCc-cccceEEEeCCeEEEEEeecCCCCh
Q 006903 352 ELLGRGKHGSLYRVVLDD-GLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNV-LPPLAYYCSKQEKLLVYEYQPNGSL 428 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nI-v~l~g~~~~~~~~~lv~Ey~~~g~L 428 (626)
+.|+.|-...+|++...+ +..+++|+........-+-.+|..+++.+...++ .++++++ .+ .+||||+++..|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~--~~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFF--TN--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEE--TT--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEe--CC--eEEEEeeCCccC
Confidence 568888889999998765 5778888874422111123578888887765555 4555554 23 259999987443
No 437
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=94.96 E-value=0.0064 Score=56.82 Aligned_cols=84 Identities=18% Similarity=0.270 Sum_probs=59.4
Q ss_pred CeEEEEEecCC-Ccee--cc-CccccCCCCCccEEEcccCCCcccCC----ccccCCCCCcEEEeeccccccc----cCh
Q 006903 73 KSVRKIVLDGF-NLSG--IL-DTTSVCKTQSLVVLSLEENNIAGTVS----QEISNCKQLTHLYVGRNKLSGN----LPD 140 (626)
Q Consensus 73 ~~v~~l~L~~~-~l~g--~~-~~~~~~~l~~L~~L~ls~N~l~g~~p----~~~~~l~~L~~L~l~~N~l~g~----ip~ 140 (626)
..++.|+|+++ ++.. .. -...+..-++|+.|+|++|+|...-- ..+..-+.|+.|+|++|.|+.. |-.
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 57899999986 6642 10 01234556789999999999984332 3344568899999999999743 223
Q ss_pred hhhcCCCCCeEEccCC
Q 006903 141 SLSKLNNLKRLDISNN 156 (626)
Q Consensus 141 ~~~~l~~L~~L~ls~N 156 (626)
.+..-+.|+.|+|++|
T Consensus 121 aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQ 136 (197)
T ss_dssp HTTTTCCCSEEECCCC
T ss_pred HHhhCCceeEEECCCC
Confidence 3455678999999976
No 438
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=94.73 E-value=0.25 Score=46.54 Aligned_cols=104 Identities=13% Similarity=0.037 Sum_probs=64.9
Q ss_pred ChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCCeeeCCCCCeEEeeccCccccCCCccccc
Q 006903 427 SLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNNILFNNNMEPCISEYGLIVTENHDQSFLA 506 (626)
Q Consensus 427 ~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~~~~~~~~~~~ 506 (626)
+|.++|.. .+.+++..+.+.++.|.+.+|.-.-. ...-..+=+-|..|++..+|.+...+ ..+. .
T Consensus 34 SL~eIL~~--~~~PlsEEqaWALc~Qc~~~L~~~~~---~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~---------~ 98 (229)
T 2yle_A 34 SLEEILRL--YNQPINEEQAWAVCYQCCGSLRAAAR---RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD---------A 98 (229)
T ss_dssp EHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred cHHHHHHH--cCCCcCHHHHHHHHHHHHHHHHhhhh---cccCCceecCCcceEEecCCceeccc-cccc---------c
Confidence 78899874 34689999999999999998866521 11111223346889999999887764 1110 1
Q ss_pred cccccchhhccccCCCCCcchhHHHHHHHHHHHcCCCCCC
Q 006903 507 QTSSLKINDISNQMCSTIKADVYGFGVILLELLTGKLVQN 546 (626)
Q Consensus 507 ~~~~~~~pe~~~~~~~~~k~DVwSfGvvl~elltg~~p~~ 546 (626)
....+.+|+... ...+.+.=|||+|+++|.-+-=..|..
T Consensus 99 ~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~ 137 (229)
T 2yle_A 99 GEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKEN 137 (229)
T ss_dssp --------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred cccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCcc
Confidence 122334555432 234678899999999999987555443
No 439
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=94.24 E-value=0.12 Score=53.74 Aligned_cols=104 Identities=17% Similarity=0.300 Sum_probs=67.8
Q ss_pred ccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccC-hhhhcCCCCCeEEccCCcCCccCCC-ccCcCC
Q 006903 93 SVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLP-DSLSKLNNLKRLDISNNNFSSELPD-LSRISG 170 (626)
Q Consensus 93 ~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip-~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~ 170 (626)
.+..+..|+.+.+..+-.. .-...+.+|+.|+.+.+. +.++ .|+ ..|.++.+|+.++|..| ++-.-.. |..+.+
T Consensus 260 aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~ 335 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQ 335 (394)
T ss_dssp TTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTT
T ss_pred eeeecccccEEecccccce-ecCcccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCC
Confidence 4556777888888655432 233457788888888886 4454 344 44777888888888754 4332232 777888
Q ss_pred CcEEEcCCCcccccCCCC---CCCCccEEEccCCc
Q 006903 171 LLTFFAENNQLRGGIPEF---DFSNLLQFNVSNNN 202 (626)
Q Consensus 171 L~~l~l~~N~l~g~ip~~---~~~~L~~l~ls~N~ 202 (626)
|+.+.+.++ ++ .|... .+++|+.+++.+|.
T Consensus 336 L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 336 LERIAIPSS-VT-KIPESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp CCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSCH
T ss_pred CCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCce
Confidence 888888655 33 45443 46778888887764
No 440
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.12 E-value=0.097 Score=55.10 Aligned_cols=140 Identities=14% Similarity=0.107 Sum_probs=81.7
Q ss_pred cccccCCCcceEEEEeCC--------CcEEEEEEcCCCCCCHHHHHHHHHHhccCCCCCc-cccceEEEeCCeEEEEEee
Q 006903 352 ELLGRGKHGSLYRVVLDD--------GLMLAVKRLRDWSISSEDFKNRMQKIDHVKHPNV-LPPLAYYCSKQEKLLVYEY 422 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~~~ei~~l~~l~H~nI-v~l~g~~~~~~~~~lv~Ey 422 (626)
+.+..|-...+|+....+ +..+++|+........-+..+|.++++.+.-.++ .++++.+ . -++||||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~ef 151 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIEEF 151 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEEC
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEEE
Confidence 457778888999998753 5789999865432222234567777766642233 3444422 2 3789999
Q ss_pred cCCCChhH--------------h---hcCC-------C---CCCCCCHHHHHHHHHH-------------------HHHH
Q 006903 423 QPNGSLFN--------------L---LHGS-------E---NGQSFDWGSRLRVAAC-------------------VAKA 456 (626)
Q Consensus 423 ~~~g~L~~--------------~---l~~~-------~---~~~~l~~~~~~~i~~~-------------------ia~g 456 (626)
++|..|.. . +|.. . ...+.-|.+..++..+ +...
T Consensus 152 I~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~e 231 (424)
T 3mes_A 152 IDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILEE 231 (424)
T ss_dssp CCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHHH
T ss_pred eCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHHH
Confidence 99865321 0 1110 0 1112224443333322 2233
Q ss_pred HHHHHHhcc--------------------CCCceeccCCCCCeeeCCCCCeEEeeccCcc
Q 006903 457 LALIHEELR--------------------EDGIAHGNLKSNNILFNNNMEPCISEYGLIV 496 (626)
Q Consensus 457 L~ylH~~~~--------------------~~~ivHrDlkp~NILl~~~~~~kl~DFGl~~ 496 (626)
+.+|.+.+. ...++|+|+.+.||+ +.++.+.+.||..+.
T Consensus 232 ~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~ 290 (424)
T 3mes_A 232 IDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSA 290 (424)
T ss_dssp HHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred HHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCC
Confidence 455543332 235899999999999 778889999998764
No 441
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=93.03 E-value=0.37 Score=49.59 Aligned_cols=84 Identities=14% Similarity=0.124 Sum_probs=35.1
Q ss_pred CCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCC-CccCcCCCcEE
Q 006903 96 KTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELP-DLSRISGLLTF 174 (626)
Q Consensus 96 ~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p-~~~~~~~L~~l 174 (626)
....|+.+.+..+ +.-.-...+.++..|+.+.+..+ ++..-...+..+.+|+.+++..+ ++.... .+..+++|+.+
T Consensus 215 ~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i 291 (379)
T 4h09_A 215 YGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKV 291 (379)
T ss_dssp TCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEE
T ss_pred cccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccc
Confidence 3444555555432 22222233445555555555443 22111223444555555554332 221111 14445555555
Q ss_pred EcCCCccc
Q 006903 175 FAENNQLR 182 (626)
Q Consensus 175 ~l~~N~l~ 182 (626)
.+.+|.++
T Consensus 292 ~l~~~~i~ 299 (379)
T 4h09_A 292 VMDNSAIE 299 (379)
T ss_dssp EECCTTCC
T ss_pred cccccccc
Confidence 55444443
No 442
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=92.16 E-value=0.26 Score=51.23 Aligned_cols=118 Identities=12% Similarity=0.108 Sum_probs=77.3
Q ss_pred EEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEcc
Q 006903 75 VRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDIS 154 (626)
Q Consensus 75 v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls 154 (626)
+..+.+..+... +....+..+..|+.+.+..+.+. ...+..+.+|+.+.+..| ++-.-...|.++.+|+.++|.
T Consensus 255 l~~~~~~~~~~~--i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp 328 (394)
T 4fs7_A 255 LESISIQNNKLR--IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLP 328 (394)
T ss_dssp CCEEEECCTTCE--ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCC
T ss_pred ceeEEcCCCcce--eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeC
Confidence 444444444322 22334566777888877765432 235778999999999765 552223458889999999997
Q ss_pred CCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC---CCCCccEEEccCC
Q 006903 155 NNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF---DFSNLLQFNVSNN 201 (626)
Q Consensus 155 ~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~---~~~~L~~l~ls~N 201 (626)
++ ++-.-.. |.++++|+.+.+..| ++ .|+.. .+.+|+.+++..|
T Consensus 329 ~~-v~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 329 YL-VEEIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTCTTCCEEEEEGG
T ss_pred Cc-ccEEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCCCCCCEEEECCC
Confidence 54 5433333 888999999999776 43 45543 4678999888654
No 443
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.58 E-value=0.69 Score=48.14 Aligned_cols=29 Identities=14% Similarity=0.229 Sum_probs=25.4
Q ss_pred CCceeccCCCCCeeeCCC------CCeEEeeccCc
Q 006903 467 DGIAHGNLKSNNILFNNN------MEPCISEYGLI 495 (626)
Q Consensus 467 ~~ivHrDlkp~NILl~~~------~~~kl~DFGl~ 495 (626)
..++|+|+.+.|||++.+ +.+.+.||..+
T Consensus 244 ~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a 278 (401)
T 3f2s_A 244 VVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYS 278 (401)
T ss_dssp EEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTC
T ss_pred eeEEeccCCcccEEEcCCcccCcccceEEEeeccC
Confidence 358999999999999876 78999999765
No 444
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=91.26 E-value=0.81 Score=47.34 Aligned_cols=82 Identities=10% Similarity=0.148 Sum_probs=53.2
Q ss_pred CccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEccCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC---CC
Q 006903 115 SQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDISNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF---DF 190 (626)
Q Consensus 115 p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~---~~ 190 (626)
...|.+|..|+.+.+..+..+ .-...|.++++|+.+++. +.++..... |..+.+|+.+.+.+| ++ .|... .+
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C 333 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGC 333 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTC
T ss_pred cceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCC
Confidence 345778888888888766543 223456788888888885 344433222 778888888888765 22 34432 46
Q ss_pred CCccEEEccC
Q 006903 191 SNLLQFNVSN 200 (626)
Q Consensus 191 ~~L~~l~ls~ 200 (626)
.+|+.+.+..
T Consensus 334 ~~L~~i~ip~ 343 (394)
T 4gt6_A 334 EQLERIAIPS 343 (394)
T ss_dssp TTCCEEEECT
T ss_pred CCCCEEEECc
Confidence 7788887643
No 445
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=90.52 E-value=0.58 Score=48.04 Aligned_cols=132 Identities=17% Similarity=0.262 Sum_probs=87.4
Q ss_pred EEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccC-hhhhcCCCCCeEEc
Q 006903 75 VRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLP-DSLSKLNNLKRLDI 153 (626)
Q Consensus 75 v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip-~~~~~l~~L~~L~l 153 (626)
+..+.+..+ +. .+....+..+..|+.+.+..+ ++..-...+.++.+|+.+.+..+ +. .|+ ..|..+.+|+.+++
T Consensus 219 l~~i~~~~~-~~-~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l 293 (379)
T 4h09_A 219 LKKITITSG-VT-TLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVM 293 (379)
T ss_dssp CSEEECCTT-CC-EECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEE
T ss_pred cceeeeccc-ee-EEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ce-eccccccccccccccccc
Confidence 444555433 22 122334567788999998765 55444556788999999999765 44 344 45788999999999
Q ss_pred cCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC---CCCCccEEEccCCcCCCCCCCCCCCCcccCCCCC
Q 006903 154 SNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF---DFSNLLQFNVSNNNLSGPVPGVNGRLGADSFSGN 222 (626)
Q Consensus 154 s~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~---~~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~gn 222 (626)
.+|.++..-+. |.++.+|+.+.+.++ ++ .|+.. .+++|+.+.+ |+.+..++...|.|.
T Consensus 294 ~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~i---------p~~v~~I~~~aF~~c 355 (379)
T 4h09_A 294 DNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNCKALSTISY---------PKSITLIESGAFEGS 355 (379)
T ss_dssp CCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCCCCC---------CTTCCEECTTTTTTS
T ss_pred cccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCCCCCCEEEE---------CCccCEEchhHhhCC
Confidence 98888765444 888999999999765 33 34443 3566766654 444445566667664
No 446
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=89.69 E-value=1.2 Score=45.91 Aligned_cols=119 Identities=13% Similarity=0.187 Sum_probs=80.8
Q ss_pred eEEEEEecCCCceeccCccccCCCCCccEEEcccCCCcccCCccccCCCCCcEEEeeccccccccChhhhcCCCCCeEEc
Q 006903 74 SVRKIVLDGFNLSGILDTTSVCKTQSLVVLSLEENNIAGTVSQEISNCKQLTHLYVGRNKLSGNLPDSLSKLNNLKRLDI 153 (626)
Q Consensus 74 ~v~~l~L~~~~l~g~~~~~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~L~l 153 (626)
.++.+.+... +. .+....+..+..|+.+.+..|... .-...+.++..|+.+.+..+.+. ...+..+.+|+.+.+
T Consensus 231 ~l~~i~ip~~-~~-~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l 304 (394)
T 4fs7_A 231 GVKNIIIPDS-FT-ELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKL 304 (394)
T ss_dssp CCCEEEECTT-CC-EECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEE
T ss_pred CCceEEECCC-ce-ecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---ccccccccccccccc
Confidence 4556666533 22 222334567788999999877554 34556888999999998876532 235788999999999
Q ss_pred cCCcCCccCCC-ccCcCCCcEEEcCCCcccccCCCC---CCCCccEEEccCC
Q 006903 154 SNNNFSSELPD-LSRISGLLTFFAENNQLRGGIPEF---DFSNLLQFNVSNN 201 (626)
Q Consensus 154 s~N~l~g~~p~-~~~~~~L~~l~l~~N~l~g~ip~~---~~~~L~~l~ls~N 201 (626)
..| ++..-+. +..+++|+.+++.++ ++ .|+.. .+++|+.+++..|
T Consensus 305 ~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 305 LDS-VKFIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp CTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT
T ss_pred ccc-cceechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc
Confidence 765 4433333 888999999999765 43 45543 4678888877544
No 447
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=80.67 E-value=0.28 Score=52.22 Aligned_cols=58 Identities=12% Similarity=0.046 Sum_probs=17.3
Q ss_pred cccccCCCcceEEEEeCC-CcEEEE------EEcCCCCCC---HHHHHHHHHHhccCCCCCccccceEEEe
Q 006903 352 ELLGRGKHGSLYRVVLDD-GLMLAV------KRLRDWSIS---SEDFKNRMQKIDHVKHPNVLPPLAYYCS 412 (626)
Q Consensus 352 ~~lG~G~fG~Vy~~~~~~-g~~vAv------K~l~~~~~~---~~~~~~ei~~l~~l~H~nIv~l~g~~~~ 412 (626)
+.|| ||.||+|.+.. ..+||| |..+..... ...+.+|..+++..+|||+++.+++...
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 4566 99999999754 467888 776653322 2457888888999999999999987543
No 448
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=71.89 E-value=6.7 Score=36.76 Aligned_cols=83 Identities=18% Similarity=0.152 Sum_probs=58.5
Q ss_pred CCCCccccceEEEeCCeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHH-HHHHhccCCCceeccCCCC
Q 006903 399 KHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALA-LIHEELREDGIAHGNLKSN 477 (626)
Q Consensus 399 ~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~-ylH~~~~~~~ivHrDlkp~ 477 (626)
.||+. -..+-.+++...+.++--+++.=+..++ .++...+++++..++.-.. +++ .-+|--|.|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~------~~~~~eKlrll~nl~~L~~~~~~------~r~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR------KTTLLSRIRAAIHLVSKVKHHSA------RRLIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH------TSCHHHHHHHHHHHHHHHSSCCS------SSEECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH------hcCHHHHHHHHHHHHHHHHHhhh------CceeEEEeCc
Confidence 57776 3444466777777777654443333442 3677889998888876554 333 4577889999
Q ss_pred CeeeCCCCCeEEeeccCc
Q 006903 478 NILFNNNMEPCISEYGLI 495 (626)
Q Consensus 478 NILl~~~~~~kl~DFGl~ 495 (626)
||++|.++.|++.-.|+-
T Consensus 114 NL~f~~~~~p~i~hRGi~ 131 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVK 131 (219)
T ss_dssp GEEECTTCCEEESCCEET
T ss_pred eEEEeCCCcEEEEEcCCc
Confidence 999999999999988863
No 449
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=68.17 E-value=5.8 Score=37.08 Aligned_cols=115 Identities=13% Similarity=0.144 Sum_probs=74.6
Q ss_pred CCCCccccceEEEeCCeEEEEEeecCCCChhHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCceeccCCCCC
Q 006903 399 KHPNVLPPLAYYCSKQEKLLVYEYQPNGSLFNLLHGSENGQSFDWGSRLRVAACVAKALALIHEELREDGIAHGNLKSNN 478 (626)
Q Consensus 399 ~H~nIv~l~g~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~N 478 (626)
.||+.+.. .+-.+++...+.|+.-+.+-=+..+ ..++...+++++..|+.-..+++ .=+|--|.|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~i------k~~~~~eKlr~l~ni~~l~~~~~------~r~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNI------KSFTKNEKLRYLLNIKNLEEVNR------TRYTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGG------GGSCHHHHHHHHHHGGGGGGGGG------SSEECCCSGGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHH------HhcCHHHHHHHHHHHHHHHHHhc------CceEEEEecce
Confidence 58887765 4555666666666554322212223 24678899999999887775554 24677899999
Q ss_pred eeeCCCCCeEEeeccCccccCCCccccccccccchhhccccCCCCCcch-hHHHHHHHHHHHcCCCCCC
Q 006903 479 ILFNNNMEPCISEYGLIVTENHDQSFLAQTSSLKINDISNQMCSTIKAD-VYGFGVILLELLTGKLVQN 546 (626)
Q Consensus 479 ILl~~~~~~kl~DFGl~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~k~D-VwSfGvvl~elltg~~p~~ 546 (626)
|+++.++.|++.-.|+.... +|. ..+ +.| .-.+=+++..+++++..|.
T Consensus 110 L~f~~~~~p~i~~RGik~~l--------------~P~-----~~~-ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVV--------------DPL-----PVS-EAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EEECTTSCEEESCCEETTTB--------------SCC-----CCC-HHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEcCCCCEEEEEccCccCC--------------CCC-----CCC-HHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999988763211 111 011 223 3366778888999987664
No 450
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=50.59 E-value=6.2 Score=40.76 Aligned_cols=28 Identities=14% Similarity=0.350 Sum_probs=23.7
Q ss_pred ceeccCCCCCeee------CCCCCeEEeeccCcc
Q 006903 469 IAHGNLKSNNILF------NNNMEPCISEYGLIV 496 (626)
Q Consensus 469 ivHrDlkp~NILl------~~~~~~kl~DFGl~~ 496 (626)
++|+|+.+.|||+ +++..+++.||..+.
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 5799999999999 456678999998764
Done!