Query 006905
Match_columns 626
No_of_seqs 602 out of 3281
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 12:04:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006905.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006905hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg2_A Methyltransferase type 99.5 1.2E-14 4.1E-19 148.3 7.4 107 196-314 28-136 (257)
2 1vl5_A Unknown conserved prote 99.5 2.8E-13 9.6E-18 136.3 12.7 110 200-313 28-140 (260)
3 3h2b_A SAM-dependent methyltra 99.4 3.7E-13 1.3E-17 130.1 11.9 99 212-315 42-143 (203)
4 4gek_A TRNA (CMO5U34)-methyltr 99.4 4.1E-13 1.4E-17 137.1 12.1 112 200-314 59-179 (261)
5 1pjz_A Thiopurine S-methyltran 99.4 2E-13 6.8E-18 133.5 9.2 101 212-312 23-139 (203)
6 1nkv_A Hypothetical protein YJ 99.4 1.2E-12 4.3E-17 130.8 13.5 117 193-314 20-141 (256)
7 3l8d_A Methyltransferase; stru 99.4 9E-13 3.1E-17 130.5 12.0 97 212-314 54-154 (242)
8 3dh0_A SAM dependent methyltra 99.4 1.7E-12 5.9E-17 126.7 13.3 144 200-352 28-177 (219)
9 3ujc_A Phosphoethanolamine N-m 99.4 1.2E-12 4.1E-17 131.1 12.5 115 193-314 39-160 (266)
10 1xtp_A LMAJ004091AAA; SGPP, st 99.4 2.8E-13 9.7E-18 135.1 7.6 99 211-314 93-198 (254)
11 1xxl_A YCGJ protein; structura 99.4 2E-12 6.8E-17 128.9 13.6 110 201-314 13-125 (239)
12 3kkz_A Uncharacterized protein 99.4 2.4E-12 8.1E-17 130.2 14.0 117 194-314 30-151 (267)
13 3dlc_A Putative S-adenosyl-L-m 99.4 1.9E-12 6.4E-17 125.5 12.7 115 195-314 30-149 (219)
14 3bus_A REBM, methyltransferase 99.4 1.5E-12 5.3E-17 131.5 12.2 115 196-314 48-167 (273)
15 2o57_A Putative sarcosine dime 99.4 1.6E-12 5.3E-17 133.5 12.0 116 195-314 64-188 (297)
16 3f4k_A Putative methyltransfer 99.4 1.9E-12 6.6E-17 129.5 12.3 117 194-314 30-151 (257)
17 3dli_A Methyltransferase; PSI- 99.4 5.2E-13 1.8E-17 133.0 7.9 113 194-315 25-142 (240)
18 3jwg_A HEN1, methyltransferase 99.4 5.3E-12 1.8E-16 123.6 14.7 115 196-313 16-141 (219)
19 2yqz_A Hypothetical protein TT 99.4 3.3E-12 1.1E-16 127.9 12.9 96 211-312 39-140 (263)
20 3hnr_A Probable methyltransfer 99.4 2.5E-12 8.7E-17 125.6 11.7 96 212-314 46-146 (220)
21 2ex4_A Adrenal gland protein A 99.4 9.9E-13 3.4E-17 131.0 8.6 104 211-314 79-186 (241)
22 2p7i_A Hypothetical protein; p 99.4 2.1E-12 7.1E-17 127.6 10.8 97 212-315 43-143 (250)
23 2gb4_A Thiopurine S-methyltran 99.3 3.4E-12 1.2E-16 129.6 12.0 97 212-313 69-191 (252)
24 3lcc_A Putative methyl chlorid 99.3 5.4E-12 1.9E-16 125.0 13.2 99 212-316 67-174 (235)
25 3g5l_A Putative S-adenosylmeth 99.3 3.6E-12 1.2E-16 127.5 11.9 98 211-314 44-146 (253)
26 2avn_A Ubiquinone/menaquinone 99.3 2.9E-12 9.8E-17 129.4 11.2 98 211-314 54-153 (260)
27 3pfg_A N-methyltransferase; N, 99.3 4.3E-12 1.5E-16 127.9 12.3 110 198-313 37-151 (263)
28 3ege_A Putative methyltransfer 99.3 2.9E-12 9.9E-17 129.6 10.5 109 196-314 21-131 (261)
29 2gs9_A Hypothetical protein TT 99.3 5.6E-12 1.9E-16 122.5 11.9 98 211-315 36-134 (211)
30 2xvm_A Tellurite resistance pr 99.3 9.8E-12 3.4E-16 119.0 13.3 109 201-313 24-136 (199)
31 4htf_A S-adenosylmethionine-de 99.3 4.4E-12 1.5E-16 129.5 11.3 112 201-314 58-174 (285)
32 1y8c_A S-adenosylmethionine-de 99.3 7E-12 2.4E-16 123.8 12.4 118 195-314 21-143 (246)
33 3ofk_A Nodulation protein S; N 99.3 3.8E-12 1.3E-16 124.2 10.2 99 211-315 51-156 (216)
34 3e23_A Uncharacterized protein 99.3 3.2E-12 1.1E-16 124.4 9.5 98 212-316 44-144 (211)
35 2p35_A Trans-aconitate 2-methy 99.3 4.6E-12 1.6E-16 126.7 10.7 107 199-314 23-133 (259)
36 1ve3_A Hypothetical protein PH 99.3 1.2E-11 4.1E-16 121.0 13.4 102 212-314 39-143 (227)
37 3jwh_A HEN1; methyltransferase 99.3 7.1E-12 2.4E-16 122.7 11.8 114 197-313 17-141 (217)
38 3dtn_A Putative methyltransfer 99.3 1E-11 3.4E-16 122.7 12.6 113 195-314 29-149 (234)
39 3mti_A RRNA methylase; SAM-dep 99.3 1.7E-11 5.6E-16 116.9 13.5 103 211-314 22-136 (185)
40 3vc1_A Geranyl diphosphate 2-C 99.3 9.8E-12 3.4E-16 129.1 12.8 101 211-314 117-222 (312)
41 3ccf_A Cyclopropane-fatty-acyl 99.3 6.7E-12 2.3E-16 127.9 11.3 105 201-314 49-155 (279)
42 3ou2_A SAM-dependent methyltra 99.3 8.9E-12 3.1E-16 121.0 11.5 108 200-314 36-147 (218)
43 3thr_A Glycine N-methyltransfe 99.3 3.9E-12 1.3E-16 130.1 9.3 118 195-314 43-176 (293)
44 3p9n_A Possible methyltransfer 99.3 1.7E-11 5.7E-16 117.7 13.1 135 177-314 11-154 (189)
45 3mgg_A Methyltransferase; NYSG 99.3 8E-12 2.8E-16 126.6 11.0 102 211-314 37-143 (276)
46 3g5t_A Trans-aconitate 3-methy 99.3 8.9E-12 3E-16 128.3 11.3 112 196-312 24-148 (299)
47 3bkw_A MLL3908 protein, S-aden 99.3 1.6E-11 5.4E-16 121.4 12.4 107 200-314 34-145 (243)
48 1kpg_A CFA synthase;, cyclopro 99.3 1.1E-11 3.9E-16 126.3 11.3 100 211-314 64-169 (287)
49 4e2x_A TCAB9; kijanose, tetron 99.3 5.8E-13 2E-17 143.9 1.2 115 195-315 93-210 (416)
50 3v97_A Ribosomal RNA large sub 99.3 1.3E-11 4.4E-16 142.6 12.5 122 471-594 541-679 (703)
51 2aot_A HMT, histamine N-methyl 99.3 5.2E-12 1.8E-16 129.9 8.0 102 211-313 52-172 (292)
52 1dus_A MJ0882; hypothetical pr 99.3 6.2E-11 2.1E-15 112.3 14.7 134 177-314 19-158 (194)
53 2p8j_A S-adenosylmethionine-de 99.3 2.3E-11 8E-16 117.6 11.8 102 212-314 24-129 (209)
54 3e8s_A Putative SAM dependent 99.3 2.6E-11 9E-16 118.0 12.2 136 470-612 53-227 (227)
55 3gu3_A Methyltransferase; alph 99.3 3.2E-11 1.1E-15 123.5 13.1 116 196-315 8-128 (284)
56 3bgv_A MRNA CAP guanine-N7 met 99.2 2.8E-11 9.7E-16 125.5 12.8 118 197-314 20-156 (313)
57 3hem_A Cyclopropane-fatty-acyl 99.2 2.5E-11 8.7E-16 125.1 12.2 110 199-314 62-184 (302)
58 3m70_A Tellurite resistance pr 99.2 4E-11 1.4E-15 122.4 13.4 100 212-313 121-223 (286)
59 3i9f_A Putative type 11 methyl 99.2 9.9E-12 3.4E-16 116.6 8.1 94 212-314 18-113 (170)
60 3sm3_A SAM-dependent methyltra 99.2 2.4E-11 8.4E-16 119.1 11.2 100 212-316 31-144 (235)
61 3cc8_A Putative methyltransfer 99.2 3.4E-11 1.2E-15 117.5 11.9 97 211-315 32-132 (230)
62 3ocj_A Putative exported prote 99.2 5.6E-11 1.9E-15 122.9 14.0 101 211-313 118-227 (305)
63 1vlm_A SAM-dependent methyltra 99.2 2.9E-11 9.9E-16 118.7 11.2 94 212-315 48-141 (219)
64 2a14_A Indolethylamine N-methy 99.2 8.8E-12 3E-16 126.5 7.3 114 200-313 44-197 (263)
65 2pxx_A Uncharacterized protein 99.2 2.2E-11 7.5E-16 117.7 9.6 98 212-314 43-160 (215)
66 3bxo_A N,N-dimethyltransferase 99.2 3.4E-11 1.2E-15 118.7 11.1 97 211-313 40-141 (239)
67 3e8s_A Putative SAM dependent 99.2 2.8E-11 9.5E-16 117.8 10.3 105 200-314 43-153 (227)
68 2vdw_A Vaccinia virus capping 99.2 2.3E-11 7.8E-16 126.7 10.2 102 212-314 49-170 (302)
69 2zfu_A Nucleomethylin, cerebra 99.2 5E-11 1.7E-15 116.2 12.0 85 212-314 68-152 (215)
70 2kw5_A SLR1183 protein; struct 99.2 4.4E-11 1.5E-15 115.4 11.3 99 214-315 32-133 (202)
71 3orh_A Guanidinoacetate N-meth 99.2 1.4E-11 4.7E-16 123.4 7.9 113 195-312 47-169 (236)
72 2fk8_A Methoxy mycolic acid sy 99.2 3.7E-11 1.3E-15 124.6 11.1 100 211-314 90-195 (318)
73 4fsd_A Arsenic methyltransfera 99.2 2.9E-11 1E-15 129.6 10.5 102 212-314 84-204 (383)
74 1zx0_A Guanidinoacetate N-meth 99.2 2.6E-11 9.1E-16 120.5 9.3 114 195-313 47-170 (236)
75 3dmg_A Probable ribosomal RNA 99.2 6.9E-11 2.4E-15 127.1 13.2 119 196-315 218-342 (381)
76 3cgg_A SAM-dependent methyltra 99.2 5.6E-11 1.9E-15 112.7 11.0 98 212-314 47-148 (195)
77 3h2b_A SAM-dependent methyltra 99.2 4.7E-11 1.6E-15 115.3 10.6 134 471-611 43-194 (203)
78 3g2m_A PCZA361.24; SAM-depende 99.2 3.8E-11 1.3E-15 123.7 10.5 113 197-314 71-191 (299)
79 1wzn_A SAM-dependent methyltra 99.2 1.3E-10 4.3E-15 116.0 13.8 114 199-314 28-146 (252)
80 3hnr_A Probable methyltransfer 99.2 3.1E-11 1.1E-15 117.8 8.7 132 470-612 46-212 (220)
81 3g07_A 7SK snRNA methylphospha 99.2 1.4E-11 4.8E-16 127.1 6.5 103 211-314 46-221 (292)
82 3grz_A L11 mtase, ribosomal pr 99.2 8.8E-11 3E-15 113.8 11.2 118 189-313 38-159 (205)
83 3pfg_A N-methyltransferase; N, 99.2 8.4E-11 2.9E-15 118.4 11.2 134 470-612 51-249 (263)
84 2xvm_A Tellurite resistance pr 99.2 3.8E-11 1.3E-15 114.8 8.2 119 470-595 33-171 (199)
85 1ri5_A MRNA capping enzyme; me 99.2 6.2E-11 2.1E-15 120.8 10.1 103 211-314 64-175 (298)
86 3d2l_A SAM-dependent methyltra 99.2 1.2E-10 4.1E-15 115.1 11.7 113 196-314 22-138 (243)
87 3iv6_A Putative Zn-dependent a 99.2 1.3E-10 4.6E-15 118.7 12.1 109 197-314 33-149 (261)
88 2g72_A Phenylethanolamine N-me 99.2 5E-11 1.7E-15 122.1 8.7 116 198-313 58-215 (289)
89 3jwg_A HEN1, methyltransferase 99.1 2.7E-10 9.3E-15 111.3 13.2 138 470-612 30-210 (219)
90 3mq2_A 16S rRNA methyltransfer 99.1 1.4E-10 4.6E-15 113.5 10.6 105 212-318 28-145 (218)
91 4gek_A TRNA (CMO5U34)-methyltr 99.1 6.8E-11 2.3E-15 120.6 8.6 99 471-573 72-179 (261)
92 4hg2_A Methyltransferase type 99.1 2.2E-11 7.4E-16 124.1 4.8 93 471-571 41-134 (257)
93 1kpg_A CFA synthase;, cyclopro 99.1 1.1E-10 3.8E-15 119.0 10.0 100 469-572 64-168 (287)
94 3dxy_A TRNA (guanine-N(7)-)-me 99.1 7.3E-11 2.5E-15 117.0 8.4 101 212-314 35-151 (218)
95 3lbf_A Protein-L-isoaspartate 99.1 2.5E-10 8.6E-15 110.8 11.8 110 196-315 64-176 (210)
96 3htx_A HEN1; HEN1, small RNA m 99.1 2.6E-10 9.1E-15 131.3 13.7 118 196-316 708-837 (950)
97 2i62_A Nicotinamide N-methyltr 99.1 6.5E-11 2.2E-15 118.5 7.7 114 200-314 45-199 (265)
98 3dli_A Methyltransferase; PSI- 99.1 4.6E-11 1.6E-15 118.8 6.6 117 470-592 42-179 (240)
99 1yzh_A TRNA (guanine-N(7)-)-me 99.1 2.8E-10 9.6E-15 111.4 12.0 101 212-314 42-157 (214)
100 3hp7_A Hemolysin, putative; st 99.1 9.3E-10 3.2E-14 114.1 16.5 131 211-350 85-226 (291)
101 3e05_A Precorrin-6Y C5,15-meth 99.1 7.7E-10 2.6E-14 107.2 15.0 109 199-314 30-143 (204)
102 1y8c_A S-adenosylmethionine-de 99.1 2.6E-10 8.8E-15 112.5 11.8 96 470-571 38-141 (246)
103 1nt2_A Fibrillarin-like PRE-rR 99.1 3.1E-10 1.1E-14 111.8 12.2 97 211-313 57-161 (210)
104 3ggd_A SAM-dependent methyltra 99.1 1.1E-10 3.8E-15 116.1 9.0 99 211-314 56-164 (245)
105 2ift_A Putative methylase HI07 99.1 2.1E-10 7.1E-15 111.8 10.7 120 193-316 36-166 (201)
106 3mti_A RRNA methylase; SAM-dep 99.1 2.3E-10 7.9E-15 108.8 10.7 139 470-611 23-183 (185)
107 3eey_A Putative rRNA methylase 99.1 1.9E-10 6.4E-15 110.6 10.1 102 212-314 23-140 (197)
108 3i9f_A Putative type 11 methyl 99.1 1.4E-10 4.9E-15 108.6 9.0 129 469-612 17-160 (170)
109 3hm2_A Precorrin-6Y C5,15-meth 99.1 2.9E-10 9.9E-15 106.9 11.1 110 197-314 13-128 (178)
110 2fca_A TRNA (guanine-N(7)-)-me 99.1 1.5E-10 5.3E-15 113.8 9.6 101 212-314 39-154 (213)
111 3m33_A Uncharacterized protein 99.1 8.3E-11 2.8E-15 116.3 7.7 87 212-310 49-139 (226)
112 3bkx_A SAM-dependent methyltra 99.1 3.6E-10 1.2E-14 114.1 12.3 111 200-314 34-160 (275)
113 2p7i_A Hypothetical protein; p 99.1 1.3E-10 4.6E-15 114.5 8.8 95 471-572 44-141 (250)
114 3hem_A Cyclopropane-fatty-acyl 99.1 1.6E-10 5.3E-15 119.2 9.5 101 469-572 72-183 (302)
115 3dmg_A Probable ribosomal RNA 99.1 1.1E-09 3.7E-14 117.8 16.4 110 470-585 234-355 (381)
116 1xtp_A LMAJ004091AAA; SGPP, st 99.1 1.1E-10 3.7E-15 116.4 7.9 131 460-595 85-236 (254)
117 1p91_A Ribosomal RNA large sub 99.1 3E-10 1E-14 114.7 11.2 91 211-314 85-179 (269)
118 1ws6_A Methyltransferase; stru 99.1 1.4E-10 4.7E-15 108.2 8.0 123 190-316 20-150 (171)
119 3ofk_A Nodulation protein S; N 99.1 9.8E-11 3.4E-15 114.1 7.2 100 468-573 50-155 (216)
120 3dlc_A Putative S-adenosyl-L-m 99.1 2.6E-10 9E-15 110.2 9.9 95 472-572 46-148 (219)
121 3ou2_A SAM-dependent methyltra 99.1 8.6E-11 2.9E-15 114.0 6.5 97 470-573 47-147 (218)
122 3e23_A Uncharacterized protein 99.1 2.1E-10 7.2E-15 111.5 9.1 120 470-594 44-179 (211)
123 3lcc_A Putative methyl chlorid 99.1 1.2E-09 4.3E-14 107.9 14.6 121 471-595 68-205 (235)
124 3uwp_A Histone-lysine N-methyl 99.1 1.8E-10 6E-15 124.3 8.8 123 187-313 151-288 (438)
125 1vl5_A Unknown conserved prote 99.1 2.1E-10 7.2E-15 115.3 8.7 98 468-572 36-140 (260)
126 3q7e_A Protein arginine N-meth 99.1 6.7E-10 2.3E-14 117.8 12.8 99 212-312 67-172 (349)
127 3ujc_A Phosphoethanolamine N-m 99.1 1.4E-10 4.9E-15 115.9 7.1 99 468-572 54-159 (266)
128 2fhp_A Methylase, putative; al 99.1 5.8E-10 2E-14 105.7 11.0 133 178-315 13-156 (187)
129 3dh0_A SAM dependent methyltra 99.1 5E-10 1.7E-14 109.1 10.7 134 470-612 38-193 (219)
130 3njr_A Precorrin-6Y methylase; 99.1 1.4E-09 4.8E-14 106.3 13.7 106 200-314 46-155 (204)
131 3lpm_A Putative methyltransfer 99.1 1.2E-09 4E-14 110.5 13.5 122 190-315 31-178 (259)
132 2zfu_A Nucleomethylin, cerebra 99.1 1E-09 3.4E-14 107.0 12.6 149 441-612 27-191 (215)
133 4dcm_A Ribosomal RNA large sub 99.1 4.9E-08 1.7E-12 104.6 26.8 112 471-585 224-349 (375)
134 2fk8_A Methoxy mycolic acid sy 99.1 3E-10 1E-14 117.8 9.3 101 469-573 90-195 (318)
135 3bxo_A N,N-dimethyltransferase 99.0 4.8E-10 1.7E-14 110.4 9.9 116 449-572 22-141 (239)
136 2fyt_A Protein arginine N-meth 99.0 1.1E-09 3.9E-14 115.6 13.4 112 196-311 51-169 (340)
137 1pjz_A Thiopurine S-methyltran 99.0 2.7E-10 9.2E-15 111.2 7.9 121 470-595 23-174 (203)
138 1nkv_A Hypothetical protein YJ 99.0 2.7E-10 9.1E-15 113.8 8.1 97 470-573 37-141 (256)
139 1xdz_A Methyltransferase GIDB; 99.0 1.5E-09 5E-14 108.4 13.4 160 446-616 48-223 (240)
140 3l8d_A Methyltransferase; stru 99.0 2.5E-10 8.5E-15 112.9 7.6 116 470-592 54-195 (242)
141 1xdz_A Methyltransferase GIDB; 99.0 9E-10 3.1E-14 109.9 11.6 96 212-313 71-174 (240)
142 3ckk_A TRNA (guanine-N(7)-)-me 99.0 4.5E-10 1.5E-14 112.7 9.4 102 212-314 47-169 (235)
143 4e2x_A TCAB9; kijanose, tetron 99.0 1.7E-10 5.7E-15 124.6 6.6 144 443-594 81-250 (416)
144 4htf_A S-adenosylmethionine-de 99.0 3.2E-10 1.1E-14 115.6 8.4 107 459-573 60-174 (285)
145 3fpf_A Mtnas, putative unchara 99.0 1.3E-09 4.4E-14 113.2 12.9 97 211-314 122-223 (298)
146 3sso_A Methyltransferase; macr 99.0 3.1E-10 1.1E-14 122.1 8.5 92 212-314 217-325 (419)
147 2fpo_A Methylase YHHF; structu 99.0 1E-09 3.6E-14 106.9 11.5 118 193-314 37-161 (202)
148 1ej0_A FTSJ; methyltransferase 99.0 5.7E-10 1.9E-14 103.6 9.1 91 212-314 23-137 (180)
149 3g5l_A Putative S-adenosylmeth 99.0 4E-10 1.4E-14 112.6 8.7 107 459-572 35-145 (253)
150 2b3t_A Protein methyltransfera 99.0 4E-09 1.4E-13 107.5 16.0 116 194-314 95-239 (276)
151 2ex4_A Adrenal gland protein A 99.0 2.4E-10 8.2E-15 113.6 6.8 123 469-595 79-223 (241)
152 2r3s_A Uncharacterized protein 99.0 2.3E-09 8E-14 111.6 14.5 113 199-314 153-272 (335)
153 1af7_A Chemotaxis receptor met 99.0 1.2E-09 4E-14 112.5 11.8 101 212-312 106-251 (274)
154 2ld4_A Anamorsin; methyltransf 99.0 7.9E-10 2.7E-14 104.6 9.7 90 208-314 9-102 (176)
155 1vbf_A 231AA long hypothetical 99.0 9.6E-10 3.3E-14 108.3 10.7 110 196-316 57-168 (231)
156 3evz_A Methyltransferase; NYSG 99.0 3E-09 1E-13 104.7 14.1 103 211-314 55-180 (230)
157 3dp7_A SAM-dependent methyltra 99.0 9.1E-10 3.1E-14 117.1 11.0 100 212-314 180-288 (363)
158 3ocj_A Putative exported prote 99.0 7.2E-10 2.4E-14 114.6 9.9 138 470-612 119-304 (305)
159 2qe6_A Uncharacterized protein 99.0 1.5E-09 5.1E-14 111.3 12.1 116 196-314 63-197 (274)
160 3p2e_A 16S rRNA methylase; met 99.0 2.2E-10 7.5E-15 114.1 5.7 101 212-312 25-138 (225)
161 2yxd_A Probable cobalt-precorr 99.0 4.1E-09 1.4E-13 98.9 14.2 109 195-314 21-132 (183)
162 2nxc_A L11 mtase, ribosomal pr 99.0 7.8E-10 2.7E-14 111.9 9.8 97 212-314 121-219 (254)
163 1xxl_A YCGJ protein; structura 99.0 5.6E-10 1.9E-14 111.1 8.7 98 468-572 20-124 (239)
164 3ccf_A Cyclopropane-fatty-acyl 99.0 5.9E-10 2E-14 113.4 9.0 97 469-572 57-154 (279)
165 3q87_B N6 adenine specific DNA 99.0 8.6E-10 3E-14 104.5 9.5 92 212-314 24-124 (170)
166 3e05_A Precorrin-6Y C5,15-meth 99.0 1.6E-09 5.5E-14 104.9 11.6 115 469-593 40-164 (204)
167 2yqz_A Hypothetical protein TT 99.0 9.9E-10 3.4E-14 109.7 10.4 96 469-571 39-140 (263)
168 3hm2_A Precorrin-6Y C5,15-meth 99.0 2E-09 6.7E-14 101.1 11.8 117 468-592 24-148 (178)
169 3dtn_A Putative methyltransfer 99.0 4.5E-10 1.5E-14 110.7 7.7 100 469-572 44-148 (234)
170 3m70_A Tellurite resistance pr 99.0 3.1E-10 1.1E-14 115.7 6.8 116 470-594 121-257 (286)
171 3sm3_A SAM-dependent methyltra 99.0 7.7E-10 2.6E-14 108.3 9.3 100 470-572 31-141 (235)
172 2o57_A Putative sarcosine dime 99.0 6.3E-10 2.1E-14 114.0 9.0 96 470-572 83-187 (297)
173 4dcm_A Ribosomal RNA large sub 99.0 1.4E-09 4.6E-14 116.7 12.0 123 188-314 200-335 (375)
174 1vlm_A SAM-dependent methyltra 99.0 1.9E-09 6.5E-14 105.7 12.0 111 470-592 48-183 (219)
175 3thr_A Glycine N-methyltransfe 99.0 2.6E-10 8.9E-15 116.5 5.9 101 470-574 58-177 (293)
176 2i62_A Nicotinamide N-methyltr 99.0 1.6E-09 5.5E-14 108.3 11.5 142 468-612 55-261 (265)
177 1x19_A CRTF-related protein; m 99.0 2.6E-09 9E-14 113.0 13.7 108 200-313 181-295 (359)
178 4df3_A Fibrillarin-like rRNA/T 99.0 5.3E-10 1.8E-14 112.4 7.9 100 209-313 75-182 (233)
179 3r0q_C Probable protein argini 99.0 1.9E-09 6.7E-14 115.4 12.8 100 211-313 63-169 (376)
180 1dl5_A Protein-L-isoaspartate 99.0 1.7E-09 5.8E-14 112.8 12.0 109 196-314 62-176 (317)
181 3g89_A Ribosomal RNA small sub 99.0 2.1E-09 7.1E-14 108.7 12.1 97 211-313 80-184 (249)
182 3mgg_A Methyltransferase; NYSG 99.0 5.9E-10 2E-14 112.8 8.0 97 469-572 37-142 (276)
183 3bus_A REBM, methyltransferase 99.0 9.3E-10 3.2E-14 111.0 9.3 95 469-572 61-166 (273)
184 2ipx_A RRNA 2'-O-methyltransfe 99.0 1.7E-09 5.7E-14 107.3 10.9 99 211-314 77-183 (233)
185 3eey_A Putative rRNA methylase 99.0 2.7E-09 9.1E-14 102.5 12.0 141 471-613 24-189 (197)
186 2ip2_A Probable phenazine-spec 99.0 3E-09 1E-13 111.1 13.3 99 213-314 169-273 (334)
187 3i53_A O-methyltransferase; CO 99.0 1.5E-09 5.1E-14 113.6 10.9 99 212-314 170-275 (332)
188 2aot_A HMT, histamine N-methyl 99.0 6.7E-10 2.3E-14 114.1 8.1 100 469-572 52-172 (292)
189 3f4k_A Putative methyltransfer 99.0 5.9E-10 2E-14 111.3 7.4 116 470-592 47-191 (257)
190 2yxe_A Protein-L-isoaspartate 99.0 3.8E-09 1.3E-13 102.8 13.0 111 196-316 64-180 (215)
191 3ege_A Putative methyltransfer 99.0 6E-10 2.1E-14 112.5 7.5 96 469-572 34-130 (261)
192 3g5t_A Trans-aconitate 3-methy 99.0 7.5E-10 2.6E-14 113.9 8.3 95 469-570 36-147 (299)
193 1l3i_A Precorrin-6Y methyltran 99.0 3.1E-09 1.1E-13 100.3 12.0 112 195-314 19-135 (192)
194 3kkz_A Uncharacterized protein 99.0 9.5E-10 3.2E-14 111.0 8.9 116 470-592 47-191 (267)
195 3hp7_A Hemolysin, putative; st 99.0 2.2E-09 7.5E-14 111.3 11.8 135 470-612 86-250 (291)
196 3gwz_A MMCR; methyltransferase 99.0 3E-09 1E-13 113.3 13.2 99 211-313 202-307 (369)
197 2p35_A Trans-aconitate 2-methy 99.0 1.3E-09 4.3E-14 108.9 9.5 123 460-590 25-154 (259)
198 2y1w_A Histone-arginine methyl 99.0 2.8E-09 9.6E-14 112.9 12.7 113 195-312 36-154 (348)
199 3vc1_A Geranyl diphosphate 2-C 99.0 8.2E-10 2.8E-14 114.5 8.2 95 468-572 116-221 (312)
200 3jwh_A HEN1; methyltransferase 99.0 1.5E-09 5.1E-14 106.0 9.6 100 470-574 30-143 (217)
201 2esr_A Methyltransferase; stru 99.0 8.6E-10 3E-14 104.1 7.6 117 195-315 16-140 (177)
202 1dus_A MJ0882; hypothetical pr 99.0 1.9E-09 6.6E-14 101.9 10.1 131 469-611 52-193 (194)
203 3cgg_A SAM-dependent methyltra 99.0 2.1E-09 7E-14 101.8 10.2 136 470-612 47-195 (195)
204 2yxd_A Probable cobalt-precorr 99.0 1.9E-09 6.6E-14 101.1 9.9 110 470-594 36-154 (183)
205 3evz_A Methyltransferase; NYSG 99.0 3.2E-09 1.1E-13 104.4 11.9 138 470-611 56-219 (230)
206 1qzz_A RDMB, aclacinomycin-10- 99.0 2.3E-09 7.9E-14 113.6 11.6 100 211-314 182-288 (374)
207 3gu3_A Methyltransferase; alph 98.9 1.5E-09 5.1E-14 111.0 9.7 99 469-574 22-128 (284)
208 2a14_A Indolethylamine N-methy 98.9 1.1E-09 3.9E-14 110.9 8.7 142 469-612 55-260 (263)
209 3d2l_A SAM-dependent methyltra 98.9 3.5E-09 1.2E-13 104.4 12.0 94 471-571 35-136 (243)
210 2pjd_A Ribosomal RNA small sub 98.9 1.5E-09 5.2E-14 114.6 9.9 113 197-314 184-304 (343)
211 1g6q_1 HnRNP arginine N-methyl 98.9 3.8E-09 1.3E-13 111.0 12.8 114 195-312 24-144 (328)
212 3bkw_A MLL3908 protein, S-aden 98.9 1E-09 3.4E-14 108.4 7.8 98 469-572 43-144 (243)
213 2gb4_A Thiopurine S-methyltran 98.9 5.6E-10 1.9E-14 113.3 6.1 121 470-595 69-225 (252)
214 3orh_A Guanidinoacetate N-meth 98.9 4.8E-10 1.6E-14 112.1 5.4 101 470-572 61-170 (236)
215 4dzr_A Protein-(glutamine-N5) 98.9 4.1E-10 1.4E-14 108.6 4.6 116 195-313 15-165 (215)
216 3njr_A Precorrin-6Y methylase; 98.9 5E-09 1.7E-13 102.4 12.2 110 470-593 56-176 (204)
217 3fzg_A 16S rRNA methylase; met 98.9 6.9E-10 2.4E-14 108.1 5.9 98 212-312 50-151 (200)
218 2avn_A Ubiquinone/menaquinone 98.9 1.7E-09 5.7E-14 109.0 9.1 119 448-574 35-154 (260)
219 3iv6_A Putative Zn-dependent a 98.9 9.2E-10 3.1E-14 112.5 7.1 118 470-592 46-172 (261)
220 3mcz_A O-methyltransferase; ad 98.9 3E-09 1E-13 111.9 11.3 100 212-313 180-287 (352)
221 1i1n_A Protein-L-isoaspartate 98.9 5.8E-09 2E-13 102.5 12.6 109 200-316 66-185 (226)
222 1wzn_A SAM-dependent methyltra 98.9 1.4E-09 4.8E-14 108.4 8.2 114 451-572 24-145 (252)
223 3grz_A L11 mtase, ribosomal pr 98.9 1.6E-09 5.6E-14 104.8 8.4 115 470-595 61-183 (205)
224 2vdw_A Vaccinia virus capping 98.9 6.5E-10 2.2E-14 115.7 5.8 103 470-574 49-171 (302)
225 2plw_A Ribosomal RNA methyltra 98.9 4.3E-09 1.5E-13 101.2 11.1 90 212-313 23-154 (201)
226 2frn_A Hypothetical protein PH 98.9 4.4E-09 1.5E-13 107.8 11.8 126 178-314 96-226 (278)
227 1jsx_A Glucose-inhibited divis 98.9 3.6E-09 1.2E-13 102.3 10.4 96 212-314 66-166 (207)
228 3id6_C Fibrillarin-like rRNA/T 98.9 5.6E-09 1.9E-13 104.9 12.0 110 200-314 64-182 (232)
229 1tw3_A COMT, carminomycin 4-O- 98.9 5.1E-09 1.7E-13 110.5 12.3 100 212-315 184-290 (360)
230 3g89_A Ribosomal RNA small sub 98.9 6.8E-09 2.3E-13 104.9 12.7 160 446-616 58-233 (249)
231 2kw5_A SLR1183 protein; struct 98.9 2.2E-09 7.6E-14 103.3 8.7 112 472-592 32-166 (202)
232 3cc8_A Putative methyltransfer 98.9 1.7E-09 5.7E-14 105.4 7.9 98 469-573 32-131 (230)
233 1jsx_A Glucose-inhibited divis 98.9 2.7E-09 9.2E-14 103.1 9.3 127 471-612 67-205 (207)
234 1jg1_A PIMT;, protein-L-isoasp 98.9 5.5E-09 1.9E-13 103.7 11.7 109 196-315 78-191 (235)
235 1r18_A Protein-L-isoaspartate( 98.9 5.5E-09 1.9E-13 103.0 11.7 111 197-315 70-196 (227)
236 2pwy_A TRNA (adenine-N(1)-)-me 98.9 5.8E-09 2E-13 104.1 11.9 107 200-314 87-199 (258)
237 2pbf_A Protein-L-isoaspartate 98.9 4.3E-09 1.5E-13 103.4 10.1 107 200-314 69-194 (227)
238 3gdh_A Trimethylguanosine synt 98.9 2.1E-10 7.1E-15 114.0 0.4 98 212-312 79-180 (241)
239 1i9g_A Hypothetical protein RV 98.9 6.7E-09 2.3E-13 105.3 11.4 108 199-314 89-204 (280)
240 1zx0_A Guanidinoacetate N-meth 98.9 1.1E-09 3.9E-14 108.7 5.5 102 470-573 61-171 (236)
241 2gs9_A Hypothetical protein TT 98.9 3.9E-09 1.3E-13 102.3 9.2 95 470-573 37-133 (211)
242 1fp1_D Isoliquiritigenin 2'-O- 98.9 3.7E-09 1.3E-13 112.5 9.7 95 211-313 209-306 (372)
243 1fbn_A MJ fibrillarin homologu 98.9 3.3E-09 1.1E-13 105.1 8.7 96 211-312 74-177 (230)
244 3fpf_A Mtnas, putative unchara 98.9 2.8E-09 9.5E-14 110.7 8.4 130 470-611 123-263 (298)
245 3g2m_A PCZA361.24; SAM-depende 98.9 1.3E-09 4.6E-14 112.0 6.0 94 472-572 85-190 (299)
246 3reo_A (ISO)eugenol O-methyltr 98.9 4.7E-09 1.6E-13 111.9 10.4 94 211-314 203-301 (368)
247 2pxx_A Uncharacterized protein 98.9 1.3E-09 4.3E-14 105.3 5.4 136 470-611 43-197 (215)
248 3lpm_A Putative methyltransfer 98.9 8.8E-09 3E-13 104.0 11.6 121 470-592 50-196 (259)
249 3lst_A CALO1 methyltransferase 98.9 1.7E-09 5.9E-14 114.1 6.6 96 211-314 184-287 (348)
250 1u2z_A Histone-lysine N-methyl 98.9 7.4E-09 2.5E-13 112.9 11.6 115 195-313 228-359 (433)
251 3p9c_A Caffeic acid O-methyltr 98.9 6.6E-09 2.3E-13 110.6 10.8 94 211-314 201-299 (364)
252 1o9g_A RRNA methyltransferase; 98.9 3.3E-09 1.1E-13 106.3 8.0 104 211-314 51-215 (250)
253 3u81_A Catechol O-methyltransf 98.9 5.4E-09 1.9E-13 102.8 9.4 99 212-313 59-170 (221)
254 2p8j_A S-adenosylmethionine-de 98.9 2.7E-09 9.2E-14 103.0 7.0 98 470-572 24-128 (209)
255 1ve3_A Hypothetical protein PH 98.9 4.5E-09 1.5E-13 102.6 8.6 98 470-574 39-144 (227)
256 3ggd_A SAM-dependent methyltra 98.8 8.7E-10 3E-14 109.6 3.4 100 470-573 57-164 (245)
257 2vdv_E TRNA (guanine-N(7)-)-me 98.8 8.9E-09 3E-13 103.1 10.8 102 212-314 50-174 (246)
258 2ozv_A Hypothetical protein AT 98.8 5.4E-09 1.8E-13 106.1 9.3 102 212-314 37-171 (260)
259 4fsd_A Arsenic methyltransfera 98.8 2.6E-09 8.9E-14 114.4 7.3 117 470-592 84-246 (383)
260 3mb5_A SAM-dependent methyltra 98.8 1.1E-08 3.9E-13 102.2 11.5 105 200-314 84-195 (255)
261 1yb2_A Hypothetical protein TA 98.8 5.2E-09 1.8E-13 106.7 8.9 95 212-314 111-212 (275)
262 2fca_A TRNA (guanine-N(7)-)-me 98.8 6.2E-09 2.1E-13 102.3 9.1 119 471-592 40-174 (213)
263 3ntv_A MW1564 protein; rossman 98.8 8.4E-09 2.9E-13 102.5 10.1 107 200-313 62-176 (232)
264 2g72_A Phenylethanolamine N-me 98.8 2.5E-09 8.7E-14 109.4 6.2 121 470-592 72-251 (289)
265 3opn_A Putative hemolysin; str 98.8 1.7E-08 5.8E-13 101.1 11.9 133 470-612 38-202 (232)
266 1l3i_A Precorrin-6Y methyltran 98.8 6.4E-09 2.2E-13 98.2 8.4 115 470-594 34-157 (192)
267 3tfw_A Putative O-methyltransf 98.8 1.4E-08 4.7E-13 102.2 11.1 98 212-314 64-171 (248)
268 3adn_A Spermidine synthase; am 98.8 1.2E-08 4.1E-13 105.9 10.7 102 211-313 83-198 (294)
269 1g8a_A Fibrillarin-like PRE-rR 98.8 1.6E-08 5.3E-13 99.5 11.1 98 211-313 73-178 (227)
270 3opn_A Putative hemolysin; str 98.8 2.3E-08 7.9E-13 100.1 12.5 91 212-313 38-137 (232)
271 3tr6_A O-methyltransferase; ce 98.8 1.4E-08 4.8E-13 99.5 10.7 98 212-314 65-175 (225)
272 1nt2_A Fibrillarin-like PRE-rR 98.8 1.6E-08 5.3E-13 99.5 11.0 96 470-571 58-160 (210)
273 3tma_A Methyltransferase; thum 98.8 2.3E-08 7.8E-13 105.8 12.9 115 197-314 191-318 (354)
274 3dr5_A Putative O-methyltransf 98.8 1.1E-08 3.8E-13 101.5 9.8 96 212-312 57-162 (221)
275 4dzr_A Protein-(glutamine-N5) 98.8 5.2E-09 1.8E-13 100.8 7.2 140 470-612 31-205 (215)
276 3b3j_A Histone-arginine methyl 98.8 9.8E-09 3.4E-13 113.5 10.3 111 197-312 146-262 (480)
277 2bm8_A Cephalosporin hydroxyla 98.8 8.9E-09 3E-13 103.1 9.0 93 212-313 82-187 (236)
278 2b3t_A Protein methyltransfera 98.8 1.2E-08 4.1E-13 104.0 10.0 135 470-611 110-275 (276)
279 1yzh_A TRNA (guanine-N(7)-)-me 98.8 1.5E-08 5E-13 99.0 10.2 121 470-594 42-179 (214)
280 2nxc_A L11 mtase, ribosomal pr 98.8 1.2E-08 4E-13 103.2 9.4 126 470-611 121-254 (254)
281 2h00_A Methyltransferase 10 do 98.8 4.6E-09 1.6E-13 105.3 5.9 116 196-312 47-191 (254)
282 1fp2_A Isoflavone O-methyltran 98.8 9.9E-09 3.4E-13 108.3 8.6 93 212-314 189-289 (352)
283 3g07_A 7SK snRNA methylphospha 98.8 1.8E-09 6.2E-14 111.2 2.9 100 470-572 47-220 (292)
284 2ld4_A Anamorsin; methyltransf 98.8 1E-08 3.5E-13 96.8 7.9 129 469-618 12-174 (176)
285 3ckk_A TRNA (guanine-N(7)-)-me 98.8 8.6E-09 2.9E-13 103.3 7.7 116 470-588 47-185 (235)
286 2nyu_A Putative ribosomal RNA 98.8 2.8E-08 9.5E-13 95.0 10.9 92 212-314 23-146 (196)
287 3bwc_A Spermidine synthase; SA 98.8 1.4E-08 4.9E-13 105.6 9.5 104 211-314 95-211 (304)
288 2oxt_A Nucleoside-2'-O-methylt 98.8 1.4E-08 4.9E-13 103.8 9.2 95 211-314 74-186 (265)
289 3bzb_A Uncharacterized protein 98.8 4.6E-08 1.6E-12 100.3 13.0 118 194-314 64-206 (281)
290 4azs_A Methyltransferase WBDD; 98.8 3.3E-09 1.1E-13 119.6 4.8 101 211-312 66-172 (569)
291 2wa2_A Non-structural protein 98.8 1.1E-08 3.7E-13 105.3 8.2 95 211-314 82-194 (276)
292 3c3p_A Methyltransferase; NP_9 98.8 1.7E-08 5.9E-13 98.2 9.1 96 212-313 57-160 (210)
293 3dp7_A SAM-dependent methyltra 98.8 1.7E-08 5.8E-13 107.3 9.8 96 469-572 179-287 (363)
294 3q87_B N6 adenine specific DNA 98.8 2.7E-08 9.2E-13 94.2 10.2 127 472-610 26-160 (170)
295 3duw_A OMT, O-methyltransferas 98.7 2.3E-08 7.8E-13 97.9 9.9 98 212-314 59-168 (223)
296 2yvl_A TRMI protein, hypotheti 98.7 4.2E-08 1.4E-12 97.3 11.8 106 200-314 82-191 (248)
297 2gpy_A O-methyltransferase; st 98.7 1.8E-08 6.3E-13 99.5 9.2 108 199-313 44-160 (233)
298 1xj5_A Spermidine synthase 1; 98.7 2.6E-08 8.7E-13 105.3 10.7 102 211-313 120-235 (334)
299 3r0q_C Probable protein argini 98.7 1.7E-08 5.7E-13 108.1 9.4 99 469-571 63-168 (376)
300 3bkx_A SAM-dependent methyltra 98.7 2.6E-08 8.8E-13 100.5 10.2 112 454-572 29-159 (275)
301 3ntv_A MW1564 protein; rossman 98.7 2.1E-08 7.2E-13 99.6 9.3 130 470-612 72-231 (232)
302 2b25_A Hypothetical protein; s 98.7 4E-08 1.4E-12 103.0 11.9 108 199-314 95-220 (336)
303 3m33_A Uncharacterized protein 98.7 5.9E-09 2E-13 102.9 5.0 110 471-592 50-162 (226)
304 3dou_A Ribosomal RNA large sub 98.7 3.3E-08 1.1E-12 95.8 10.2 91 212-313 26-139 (191)
305 1ri5_A MRNA capping enzyme; me 98.7 5.1E-09 1.8E-13 106.5 4.5 102 470-574 65-176 (298)
306 3dxy_A TRNA (guanine-N(7)-)-me 98.7 7.2E-09 2.4E-13 102.6 5.4 115 470-587 35-166 (218)
307 3i53_A O-methyltransferase; CO 98.7 3.6E-08 1.2E-12 103.0 10.9 133 468-611 168-331 (332)
308 1ne2_A Hypothetical protein TA 98.7 1.5E-07 5.3E-12 90.5 14.3 91 211-312 51-145 (200)
309 3a27_A TYW2, uncharacterized p 98.7 3.4E-08 1.2E-12 101.0 10.1 96 212-314 120-220 (272)
310 3tfw_A Putative O-methyltransf 98.7 5.4E-08 1.9E-12 97.8 11.3 133 470-612 64-225 (248)
311 3gjy_A Spermidine synthase; AP 98.7 1.1E-08 3.8E-13 107.2 6.2 113 196-313 69-200 (317)
312 3r3h_A O-methyltransferase, SA 98.7 1.3E-08 4.3E-13 102.4 6.4 97 212-313 61-170 (242)
313 3giw_A Protein of unknown func 98.7 1.1E-08 3.9E-13 105.0 6.1 118 196-314 64-201 (277)
314 1ixk_A Methyltransferase; open 98.7 4.3E-08 1.5E-12 102.5 10.6 110 202-314 111-247 (315)
315 2frn_A Hypothetical protein PH 98.7 4.2E-08 1.4E-12 100.5 10.3 115 470-593 126-253 (278)
316 3q7e_A Protein arginine N-meth 98.7 1.2E-08 4.1E-13 108.1 6.4 98 470-571 67-172 (349)
317 1qzz_A RDMB, aclacinomycin-10- 98.7 4.2E-08 1.4E-12 103.9 10.6 138 468-612 181-356 (374)
318 4hc4_A Protein arginine N-meth 98.7 7.3E-08 2.5E-12 103.3 12.4 97 212-312 84-188 (376)
319 3bgv_A MRNA CAP guanine-N7 met 98.7 8.6E-09 2.9E-13 106.7 5.0 103 470-574 35-157 (313)
320 2hnk_A SAM-dependent O-methylt 98.7 9.8E-08 3.3E-12 94.9 12.5 107 200-313 51-181 (239)
321 3mcz_A O-methyltransferase; ad 98.7 5.7E-08 1.9E-12 102.1 11.3 143 459-612 169-349 (352)
322 2qe6_A Uncharacterized protein 98.7 6.6E-08 2.3E-12 99.0 11.5 103 468-574 76-198 (274)
323 2p41_A Type II methyltransfera 98.7 2.9E-08 9.9E-13 103.5 8.7 98 212-314 83-192 (305)
324 4a6d_A Hydroxyindole O-methylt 98.7 5.1E-08 1.7E-12 103.4 10.6 97 212-314 180-284 (353)
325 1x19_A CRTF-related protein; m 98.7 4.2E-08 1.4E-12 103.7 9.8 102 462-572 184-295 (359)
326 1o54_A SAM-dependent O-methylt 98.7 6.2E-08 2.1E-12 98.6 10.7 105 200-314 103-214 (277)
327 1uir_A Polyamine aminopropyltr 98.7 2.9E-08 1E-12 103.7 8.4 102 211-313 77-195 (314)
328 1nv8_A HEMK protein; class I a 98.7 1.3E-07 4.3E-12 97.5 13.1 117 193-314 107-250 (284)
329 1ej0_A FTSJ; methyltransferase 98.7 4.4E-08 1.5E-12 90.6 8.6 132 470-611 23-177 (180)
330 3tr6_A O-methyltransferase; ce 98.7 2.6E-08 9E-13 97.5 7.4 128 470-612 65-224 (225)
331 2fyt_A Protein arginine N-meth 98.7 2E-08 6.9E-13 106.0 7.0 96 470-569 65-168 (340)
332 3p2e_A 16S rRNA methylase; met 98.7 1.2E-08 4.2E-13 101.5 4.9 95 470-570 25-137 (225)
333 2ip2_A Probable phenazine-spec 98.7 4.5E-08 1.5E-12 102.1 9.4 140 460-611 160-333 (334)
334 2igt_A SAM dependent methyltra 98.7 4.7E-08 1.6E-12 103.1 9.6 114 199-314 142-273 (332)
335 3ajd_A Putative methyltransfer 98.7 5.1E-08 1.7E-12 99.6 9.4 102 212-314 84-212 (274)
336 3duw_A OMT, O-methyltransferas 98.6 4.5E-08 1.5E-12 95.8 8.2 133 470-612 59-222 (223)
337 1zg3_A Isoflavanone 4'-O-methy 98.6 3.5E-08 1.2E-12 104.3 8.0 93 212-314 194-294 (358)
338 3htx_A HEN1; HEN1, small RNA m 98.6 9.4E-08 3.2E-12 110.3 11.9 102 470-573 722-835 (950)
339 3cbg_A O-methyltransferase; cy 98.6 8.7E-08 3E-12 95.2 10.0 97 212-313 73-182 (232)
340 1iy9_A Spermidine synthase; ro 98.6 5.9E-08 2E-12 99.5 9.0 102 211-313 75-189 (275)
341 3gwz_A MMCR; methyltransferase 98.6 1.6E-07 5.5E-12 99.9 12.6 140 463-612 197-369 (369)
342 1inl_A Spermidine synthase; be 98.6 1.3E-07 4.3E-12 98.1 11.3 101 212-313 91-205 (296)
343 2ozv_A Hypothetical protein AT 98.6 1.6E-07 5.4E-12 95.2 11.8 118 469-591 36-188 (260)
344 3u81_A Catechol O-methyltransf 98.6 6.3E-08 2.2E-12 95.1 8.6 136 470-612 59-213 (221)
345 2o07_A Spermidine synthase; st 98.6 5.5E-08 1.9E-12 101.3 8.5 102 211-313 95-209 (304)
346 2r3s_A Uncharacterized protein 98.6 7E-08 2.4E-12 100.4 8.9 132 470-612 166-335 (335)
347 2avd_A Catechol-O-methyltransf 98.6 2.7E-07 9.3E-12 90.5 12.6 97 212-313 70-179 (229)
348 1sui_A Caffeoyl-COA O-methyltr 98.6 8.7E-08 3E-12 96.5 9.1 97 212-313 80-190 (247)
349 2bm8_A Cephalosporin hydroxyla 98.6 3.3E-08 1.1E-12 98.9 6.0 112 471-591 83-213 (236)
350 3p9n_A Possible methyltransfer 98.6 3.9E-08 1.3E-12 94.1 6.2 100 470-573 45-154 (189)
351 3tm4_A TRNA (guanine N2-)-meth 98.6 3.1E-07 1.1E-11 98.2 13.8 110 197-312 206-328 (373)
352 2i7c_A Spermidine synthase; tr 98.6 5.8E-08 2E-12 99.9 7.8 98 211-314 78-193 (283)
353 3c3p_A Methyltransferase; NP_9 98.6 8.8E-08 3E-12 93.1 8.7 93 470-572 57-160 (210)
354 2ift_A Putative methylase HI07 98.6 2.6E-08 8.9E-13 96.9 4.9 99 471-575 55-166 (201)
355 1yb2_A Hypothetical protein TA 98.6 9.1E-08 3.1E-12 97.5 9.1 110 469-592 110-232 (275)
356 2b2c_A Spermidine synthase; be 98.6 3.8E-08 1.3E-12 103.0 6.4 96 212-313 109-222 (314)
357 1wy7_A Hypothetical protein PH 98.6 5E-07 1.7E-11 87.2 13.9 95 211-311 49-147 (207)
358 1tw3_A COMT, carminomycin 4-O- 98.6 1E-07 3.5E-12 100.4 9.6 137 468-612 182-356 (360)
359 2vdv_E TRNA (guanine-N(7)-)-me 98.6 7E-08 2.4E-12 96.6 7.8 117 470-589 50-191 (246)
360 2qm3_A Predicted methyltransfe 98.6 3.4E-07 1.2E-11 97.7 13.7 99 211-313 172-278 (373)
361 3mq2_A 16S rRNA methyltransfer 98.6 5.7E-08 1.9E-12 94.8 6.6 119 470-593 28-180 (218)
362 3sso_A Methyltransferase; macr 98.6 8.5E-09 2.9E-13 110.9 0.7 128 453-592 202-362 (419)
363 3lbf_A Protein-L-isoaspartate 98.6 6.2E-08 2.1E-12 93.8 6.6 93 469-574 77-176 (210)
364 2pt6_A Spermidine synthase; tr 98.6 6.1E-08 2.1E-12 101.7 7.0 96 212-313 117-230 (321)
365 1g6q_1 HnRNP arginine N-methyl 98.6 6E-08 2E-12 101.8 6.8 96 471-570 40-143 (328)
366 1o9g_A RRNA methyltransferase; 98.6 5.6E-08 1.9E-12 97.3 6.3 105 469-574 51-216 (250)
367 2pwy_A TRNA (adenine-N(1)-)-me 98.6 2.3E-07 8E-12 92.4 10.8 109 470-591 97-218 (258)
368 1p91_A Ribosomal RNA large sub 98.6 3.9E-08 1.3E-12 99.1 5.1 91 470-574 86-180 (269)
369 2esr_A Methyltransferase; stru 98.6 3.1E-08 1.1E-12 93.3 4.1 99 470-574 32-140 (177)
370 1g8a_A Fibrillarin-like PRE-rR 98.6 3.4E-07 1.2E-11 89.9 11.7 131 470-612 74-227 (227)
371 2plw_A Ribosomal RNA methyltra 98.5 1.3E-07 4.4E-12 90.8 8.2 136 470-611 23-195 (201)
372 2y1w_A Histone-arginine methyl 98.5 1E-07 3.5E-12 100.8 8.0 95 470-571 51-154 (348)
373 1mjf_A Spermidine synthase; sp 98.5 8.3E-08 2.8E-12 98.6 7.0 99 212-313 76-193 (281)
374 2oxt_A Nucleoside-2'-O-methylt 98.5 2.3E-08 7.8E-13 102.2 2.7 134 470-611 75-227 (265)
375 1ws6_A Methyltransferase; stru 98.5 1.8E-08 6.3E-13 93.6 1.7 97 470-574 42-149 (171)
376 3mb5_A SAM-dependent methyltra 98.5 1.8E-07 6.1E-12 93.5 9.0 105 470-588 94-211 (255)
377 3frh_A 16S rRNA methylase; met 98.5 2.1E-07 7.1E-12 93.7 9.4 101 210-312 104-205 (253)
378 1fbn_A MJ fibrillarin homologu 98.5 1.7E-07 5.8E-12 92.7 8.7 134 470-612 75-228 (230)
379 1zq9_A Probable dimethyladenos 98.5 1.8E-07 6.2E-12 96.3 9.3 110 195-310 14-144 (285)
380 2yxl_A PH0851 protein, 450AA l 98.5 4.2E-07 1.4E-11 99.5 12.7 103 212-315 260-391 (450)
381 3c3y_A Pfomt, O-methyltransfer 98.5 2E-07 6.8E-12 93.1 9.1 97 212-313 71-181 (237)
382 3dr5_A Putative O-methyltransf 98.5 3.4E-07 1.2E-11 90.7 10.4 132 471-613 58-214 (221)
383 3lst_A CALO1 methyltransferase 98.5 8.3E-08 2.8E-12 101.2 6.1 139 461-611 177-347 (348)
384 3dou_A Ribosomal RNA large sub 98.5 1.2E-07 4E-12 92.0 6.5 131 470-612 26-181 (191)
385 2b78_A Hypothetical protein SM 98.5 3.3E-07 1.1E-11 98.4 10.7 104 212-316 213-334 (385)
386 2pjd_A Ribosomal RNA small sub 98.5 8.3E-08 2.8E-12 101.2 5.8 130 471-612 198-337 (343)
387 2fhp_A Methylase, putative; al 98.5 9.3E-08 3.2E-12 90.3 5.5 99 470-574 45-156 (187)
388 2avd_A Catechol-O-methyltransf 98.5 2.1E-07 7.3E-12 91.2 8.3 128 470-612 70-229 (229)
389 3lec_A NADB-rossmann superfami 98.5 6.8E-07 2.3E-11 89.5 12.0 98 212-313 22-125 (230)
390 2ipx_A RRNA 2'-O-methyltransfe 98.5 2.9E-07 1E-11 90.9 9.2 133 470-611 78-231 (233)
391 1vbf_A 231AA long hypothetical 98.5 1.3E-07 4.3E-12 93.0 6.3 92 470-574 71-167 (231)
392 1sqg_A SUN protein, FMU protei 98.5 5.4E-07 1.8E-11 98.0 11.8 111 201-314 238-375 (429)
393 2gpy_A O-methyltransferase; st 98.5 1.3E-07 4.5E-12 93.4 6.2 94 470-572 55-160 (233)
394 3fzg_A 16S rRNA methylase; met 98.5 7.3E-08 2.5E-12 93.9 4.1 139 457-611 40-197 (200)
395 3r3h_A O-methyltransferase, SA 98.5 8.6E-08 2.9E-12 96.3 4.8 128 470-612 61-220 (242)
396 3gdh_A Trimethylguanosine synt 98.5 8.9E-09 3E-13 102.1 -2.4 96 470-572 79-181 (241)
397 3gnl_A Uncharacterized protein 98.5 8.9E-07 3E-11 89.4 12.0 98 212-313 22-125 (244)
398 2p41_A Type II methyltransfera 98.4 3.9E-08 1.3E-12 102.6 1.6 95 470-571 83-190 (305)
399 3c0k_A UPF0064 protein YCCW; P 98.4 6.6E-07 2.3E-11 96.2 11.2 104 212-316 221-342 (396)
400 2cmg_A Spermidine synthase; tr 98.4 4.2E-07 1.4E-11 92.6 9.1 89 211-313 72-171 (262)
401 2h1r_A Dimethyladenosine trans 98.4 5.4E-07 1.8E-11 93.4 10.0 88 196-289 29-119 (299)
402 2wa2_A Non-structural protein 98.4 6.3E-08 2.1E-12 99.6 2.7 95 470-571 83-192 (276)
403 1wxx_A TT1595, hypothetical pr 98.4 2.3E-07 7.9E-12 99.3 7.1 104 211-315 209-327 (382)
404 4dmg_A Putative uncharacterize 98.4 6.5E-07 2.2E-11 96.5 10.5 102 212-314 215-327 (393)
405 1nv8_A HEMK protein; class I a 98.4 2.7E-07 9.3E-12 95.0 7.2 129 471-612 125-282 (284)
406 2jjq_A Uncharacterized RNA met 98.4 1.8E-06 6.3E-11 93.9 14.0 96 212-314 291-388 (425)
407 2b25_A Hypothetical protein; s 98.4 3.2E-07 1.1E-11 96.1 7.7 107 470-585 106-233 (336)
408 3id6_C Fibrillarin-like rRNA/T 98.4 1.3E-06 4.5E-11 87.6 11.7 134 470-612 77-231 (232)
409 3bwc_A Spermidine synthase; SA 98.4 9.3E-07 3.2E-11 91.8 11.1 141 470-612 96-258 (304)
410 2frx_A Hypothetical protein YE 98.4 6.3E-07 2.2E-11 99.0 10.3 103 211-314 117-247 (479)
411 3m6w_A RRNA methylase; rRNA me 98.4 3E-07 1E-11 101.1 7.7 110 202-314 94-230 (464)
412 3reo_A (ISO)eugenol O-methyltr 98.4 2.4E-07 8.1E-12 98.7 6.6 97 468-572 202-300 (368)
413 3cbg_A O-methyltransferase; cy 98.4 2.9E-07 9.8E-12 91.4 6.7 127 471-612 74-232 (232)
414 3v97_A Ribosomal RNA large sub 98.4 7.3E-07 2.5E-11 103.0 11.0 103 212-315 540-659 (703)
415 2f8l_A Hypothetical protein LM 98.4 1.1E-06 3.8E-11 92.5 11.5 102 211-314 130-257 (344)
416 2yx1_A Hypothetical protein MJ 98.4 1.6E-06 5.3E-11 91.4 12.5 92 212-313 196-291 (336)
417 2fpo_A Methylase YHHF; structu 98.4 2.1E-07 7.1E-12 90.5 5.4 98 471-574 56-162 (202)
418 3adn_A Spermidine synthase; am 98.4 2.8E-06 9.5E-11 88.0 14.2 143 469-613 83-246 (294)
419 2hnk_A SAM-dependent O-methylt 98.4 3.5E-07 1.2E-11 90.9 7.1 129 470-613 61-232 (239)
420 2yxe_A Protein-L-isoaspartate 98.4 2.7E-07 9.2E-12 89.6 6.1 91 470-574 78-179 (215)
421 3uwp_A Histone-lysine N-methyl 98.4 2E-07 6.9E-12 100.6 5.6 112 470-590 174-312 (438)
422 3kr9_A SAM-dependent methyltra 98.4 2E-06 6.9E-11 85.8 12.5 97 212-313 16-119 (225)
423 4df3_A Fibrillarin-like rRNA/T 98.4 1.1E-06 3.8E-11 88.1 10.6 96 470-572 78-182 (233)
424 1uwv_A 23S rRNA (uracil-5-)-me 98.4 1.4E-06 4.7E-11 95.0 12.2 111 196-314 273-390 (433)
425 1sui_A Caffeoyl-COA O-methyltr 98.4 4.6E-07 1.6E-11 91.2 7.7 94 470-572 80-190 (247)
426 1fp2_A Isoflavone O-methyltran 98.4 1.4E-07 4.6E-12 99.6 3.9 97 469-573 188-289 (352)
427 3k6r_A Putative transferase PH 98.4 1.5E-06 5.1E-11 89.5 11.6 124 178-312 96-224 (278)
428 2as0_A Hypothetical protein PH 98.4 4.5E-07 1.6E-11 97.4 8.1 103 211-314 217-336 (396)
429 3lcv_B Sisomicin-gentamicin re 98.4 5E-07 1.7E-11 91.9 7.9 99 212-312 133-235 (281)
430 1mjf_A Spermidine synthase; sp 98.4 6.3E-07 2.2E-11 92.0 8.8 138 470-612 76-239 (281)
431 1o54_A SAM-dependent O-methylt 98.4 8.5E-07 2.9E-11 90.1 9.6 108 470-591 113-233 (277)
432 1fp1_D Isoliquiritigenin 2'-O- 98.4 1.8E-07 6.3E-12 99.4 4.7 99 468-572 208-306 (372)
433 1iy9_A Spermidine synthase; ro 98.4 1.3E-06 4.5E-11 89.4 10.8 143 469-613 75-237 (275)
434 2yvl_A TRMI protein, hypotheti 98.4 8.5E-07 2.9E-11 87.7 8.9 104 470-587 92-206 (248)
435 1af7_A Chemotaxis receptor met 98.4 2.5E-07 8.7E-12 95.0 5.2 119 443-573 86-253 (274)
436 3bzb_A Uncharacterized protein 98.3 6.4E-07 2.2E-11 91.7 7.8 120 470-594 80-234 (281)
437 1wy7_A Hypothetical protein PH 98.3 4.6E-06 1.6E-10 80.3 13.4 117 470-594 50-172 (207)
438 1dl5_A Protein-L-isoaspartate 98.3 2.8E-07 9.5E-12 96.0 5.0 93 470-574 76-177 (317)
439 3m4x_A NOL1/NOP2/SUN family pr 98.3 4E-07 1.4E-11 100.0 6.3 110 202-314 98-235 (456)
440 1inl_A Spermidine synthase; be 98.3 1.1E-06 3.9E-11 90.9 9.5 142 470-613 91-253 (296)
441 1ne2_A Hypothetical protein TA 98.3 1.8E-06 6E-11 83.0 10.0 113 470-592 52-165 (200)
442 1ixk_A Methyltransferase; open 98.3 1.2E-06 4.1E-11 91.4 9.4 119 470-590 119-268 (315)
443 1i9g_A Hypothetical protein RV 98.3 1.1E-06 3.7E-11 89.0 8.8 108 470-590 100-223 (280)
444 1xj5_A Spermidine synthase 1; 98.3 7.6E-07 2.6E-11 93.9 7.9 101 469-571 120-234 (334)
445 2nyu_A Putative ribosomal RNA 98.3 8.9E-07 3E-11 84.4 7.4 137 470-611 23-186 (196)
446 1i1n_A Protein-L-isoaspartate 98.3 2.3E-07 7.7E-12 91.0 3.0 93 470-573 78-183 (226)
447 3p9c_A Caffeic acid O-methyltr 98.3 5.6E-07 1.9E-11 95.7 6.3 98 468-573 200-299 (364)
448 3tma_A Methyltransferase; thum 98.3 1.5E-06 5.1E-11 91.8 9.4 137 468-611 202-353 (354)
449 2ih2_A Modification methylase 98.3 1.8E-06 6.3E-11 92.6 10.3 108 195-314 25-165 (421)
450 3b5i_A S-adenosyl-L-methionine 98.3 2E-06 6.9E-11 92.0 10.4 102 212-314 53-226 (374)
451 2b2c_A Spermidine synthase; be 98.3 1.8E-06 6.1E-11 90.3 9.6 141 470-612 109-269 (314)
452 3c3y_A Pfomt, O-methyltransfer 98.3 8.8E-07 3E-11 88.3 6.9 94 470-572 71-181 (237)
453 2igt_A SAM dependent methyltra 98.3 9.8E-07 3.3E-11 93.0 7.6 120 470-592 154-299 (332)
454 3evf_A RNA-directed RNA polyme 98.3 4.7E-06 1.6E-10 85.1 12.3 121 190-314 55-185 (277)
455 2pt6_A Spermidine synthase; tr 98.3 1.7E-06 5.9E-11 90.6 9.2 142 470-614 117-279 (321)
456 2okc_A Type I restriction enzy 98.3 3.3E-06 1.1E-10 92.2 11.7 116 195-314 157-308 (445)
457 3b3j_A Histone-arginine methyl 98.2 4.5E-07 1.5E-11 100.2 4.2 96 470-570 159-261 (480)
458 2xyq_A Putative 2'-O-methyl tr 98.2 2.7E-06 9.1E-11 88.1 9.7 89 211-314 63-172 (290)
459 3a27_A TYW2, uncharacterized p 98.2 1.4E-06 4.7E-11 89.0 7.2 114 470-592 120-246 (272)
460 2i7c_A Spermidine synthase; tr 98.2 5.9E-06 2E-10 84.8 11.9 141 470-612 79-239 (283)
461 3gjy_A Spermidine synthase; AP 98.2 3.3E-06 1.1E-10 88.4 9.9 142 470-615 90-250 (317)
462 1yub_A Ermam, rRNA methyltrans 98.2 8.4E-08 2.9E-12 96.2 -2.2 111 197-312 17-144 (245)
463 3giw_A Protein of unknown func 98.2 1.3E-06 4.5E-11 89.6 6.5 99 468-572 77-200 (277)
464 1jg1_A PIMT;, protein-L-isoasp 98.2 7.1E-07 2.4E-11 88.4 4.3 92 470-574 92-191 (235)
465 2o07_A Spermidine synthase; st 98.2 6.4E-06 2.2E-10 85.6 11.5 142 470-612 96-256 (304)
466 3gru_A Dimethyladenosine trans 98.2 4.4E-06 1.5E-10 86.6 9.9 87 195-285 36-124 (295)
467 2xyq_A Putative 2'-O-methyl tr 98.2 4.5E-06 1.5E-10 86.4 9.9 128 470-611 64-210 (290)
468 2h00_A Methyltransferase 10 do 98.2 4E-07 1.4E-11 91.1 1.9 99 470-571 66-191 (254)
469 3ajd_A Putative methyltransfer 98.1 1.4E-06 4.8E-11 88.9 5.3 115 470-586 84-229 (274)
470 4a6d_A Hydroxyindole O-methylt 98.1 5.4E-06 1.8E-10 87.7 9.8 140 461-612 172-346 (353)
471 4hc4_A Protein arginine N-meth 98.1 3E-06 1E-10 90.8 7.9 97 471-571 85-188 (376)
472 1qam_A ERMC' methyltransferase 98.1 4.9E-06 1.7E-10 83.5 8.9 83 195-285 16-104 (244)
473 2qm3_A Predicted methyltransfe 98.1 4.7E-06 1.6E-10 88.8 9.2 117 470-592 173-304 (373)
474 1u2z_A Histone-lysine N-methyl 98.1 2.4E-06 8.1E-11 93.2 6.9 98 469-574 242-361 (433)
475 1uir_A Polyamine aminopropyltr 98.1 3.2E-06 1.1E-10 88.1 7.6 142 470-613 78-243 (314)
476 2cmg_A Spermidine synthase; tr 98.1 1.4E-05 4.7E-10 81.4 12.1 129 470-613 73-217 (262)
477 4dmg_A Putative uncharacterize 98.1 3.5E-06 1.2E-10 90.8 7.4 122 470-594 215-354 (393)
478 1r18_A Protein-L-isoaspartate( 98.1 2.6E-06 8.8E-11 83.8 5.6 92 470-573 85-195 (227)
479 3c0k_A UPF0064 protein YCCW; P 98.1 3.9E-06 1.3E-10 90.1 7.5 122 471-594 222-367 (396)
480 2pbf_A Protein-L-isoaspartate 98.1 9.1E-07 3.1E-11 86.7 2.1 93 470-573 81-194 (227)
481 1zg3_A Isoflavanone 4'-O-methy 98.1 9.3E-07 3.2E-11 93.4 2.2 95 470-572 194-293 (358)
482 2f8l_A Hypothetical protein LM 98.1 9.8E-06 3.3E-10 85.2 9.7 143 468-612 129-305 (344)
483 3bt7_A TRNA (uracil-5-)-methyl 98.1 8.7E-06 3E-10 86.7 9.3 94 212-313 214-326 (369)
484 1wxx_A TT1595, hypothetical pr 98.0 4.9E-06 1.7E-10 89.0 6.7 122 470-594 210-353 (382)
485 2b78_A Hypothetical protein SM 98.0 5.8E-06 2E-10 88.7 6.6 118 471-590 214-355 (385)
486 2qfm_A Spermine synthase; sper 98.0 1.2E-05 4E-10 85.6 8.5 112 196-313 174-314 (364)
487 2efj_A 3,7-dimethylxanthine me 98.0 1.6E-05 5.4E-10 85.3 9.1 102 212-314 53-226 (384)
488 3ldu_A Putative methylase; str 97.9 3.6E-05 1.2E-09 82.6 11.6 101 212-314 196-345 (385)
489 3k0b_A Predicted N6-adenine-sp 97.9 4.5E-05 1.5E-09 82.1 12.1 101 212-314 202-351 (393)
490 3fut_A Dimethyladenosine trans 97.9 3.4E-05 1.2E-09 79.0 10.5 85 195-285 33-120 (271)
491 2yxl_A PH0851 protein, 450AA l 97.9 2.2E-05 7.7E-10 85.8 9.7 118 470-590 260-412 (450)
492 2ih2_A Modification methylase 97.9 2.2E-05 7.6E-10 84.1 9.4 131 471-611 41-210 (421)
493 2frx_A Hypothetical protein YE 97.9 1.3E-05 4.3E-10 88.7 7.5 116 470-588 118-266 (479)
494 2as0_A Hypothetical protein PH 97.9 1.2E-05 4E-10 86.4 6.8 124 470-595 218-364 (396)
495 2ar0_A M.ecoki, type I restric 97.9 2.3E-05 7.9E-10 87.8 9.2 116 196-314 156-313 (541)
496 3ldg_A Putative uncharacterize 97.9 9E-05 3.1E-09 79.5 13.4 101 212-314 195-344 (384)
497 3tqs_A Ribosomal RNA small sub 97.9 4.1E-05 1.4E-09 77.6 9.8 85 195-284 15-105 (255)
498 1sqg_A SUN protein, FMU protei 97.8 2.5E-05 8.7E-10 84.8 8.4 114 470-587 247-393 (429)
499 3k6r_A Putative transferase PH 97.8 4.5E-05 1.5E-09 78.4 9.4 137 441-595 106-255 (278)
500 3lcv_B Sisomicin-gentamicin re 97.8 4.8E-05 1.7E-09 77.4 9.3 143 457-611 123-281 (281)
No 1
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.51 E-value=1.2e-14 Score=148.29 Aligned_cols=107 Identities=23% Similarity=0.317 Sum_probs=84.4
Q ss_pred HHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCC
Q 006905 196 AYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPS 273 (626)
Q Consensus 196 ~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d 273 (626)
+.++.|.+..+ ...+|||||||+|.++..|+++ .|+++|+++ .|++.|++ ...+.+.+++++.+|+++
T Consensus 28 ~l~~~l~~~~~----~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~-----~ml~~a~~-~~~v~~~~~~~e~~~~~~ 97 (257)
T 4hg2_A 28 ALFRWLGEVAP----ARGDALDCGCGSGQASLGLAEFFERVHAVDPGE-----AQIRQALR-HPRVTYAVAPAEDTGLPP 97 (257)
T ss_dssp HHHHHHHHHSS----CSSEEEEESCTTTTTHHHHHTTCSEEEEEESCH-----HHHHTCCC-CTTEEEEECCTTCCCCCS
T ss_pred HHHHHHHHhcC----CCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcH-----Hhhhhhhh-cCCceeehhhhhhhcccC
Confidence 34444444432 2458999999999999999997 567776654 56666543 346788889999999999
Q ss_pred CCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 274 RAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 274 ~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
++||+|+|+.++ ||.+ ...++.|+.|+|||||.|++...
T Consensus 98 ~sfD~v~~~~~~-h~~~-~~~~~~e~~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 98 ASVDVAIAAQAM-HWFD-LDRFWAELRRVARPGAVFAAVTY 136 (257)
T ss_dssp SCEEEEEECSCC-TTCC-HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CcccEEEEeeeh-hHhh-HHHHHHHHHHHcCCCCEEEEEEC
Confidence 999999999999 6665 57899999999999999999754
No 2
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.46 E-value=2.8e-13 Score=136.35 Aligned_cols=110 Identities=16% Similarity=0.260 Sum_probs=85.5
Q ss_pred HHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCC-CeEEEEcccccCCCCCCCe
Q 006905 200 DIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGV-PALIGVLAAERLPYPSRAF 276 (626)
Q Consensus 200 ~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~-~~~~~v~d~~~Lpf~d~sF 276 (626)
.+.+.+... ++.+|||||||+|.++..|+++ .++++|+++.++..+.. .+.+.+. .+.+.++|...+|+++++|
T Consensus 28 ~l~~~l~~~--~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~-~~~~~~~~~v~~~~~d~~~l~~~~~~f 104 (260)
T 1vl5_A 28 KLMQIAALK--GNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARA-FIEGNGHQQVEYVQGDAEQMPFTDERF 104 (260)
T ss_dssp HHHHHHTCC--SCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHH-HHHHTTCCSEEEEECCC-CCCSCTTCE
T ss_pred HHHHHhCCC--CCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHH-HHHhcCCCceEEEEecHHhCCCCCCCE
Confidence 445555433 3559999999999999999887 68888887755544332 2333444 4778888999999999999
Q ss_pred eEEEeccccccccccHHHHHHHHHhcccCCeEEEEEe
Q 006905 277 DMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 277 DlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
|+|+|+.+++|+. ++..+|.++.|+|||||+|++..
T Consensus 105 D~V~~~~~l~~~~-d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 105 HIVTCRIAAHHFP-NPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp EEEEEESCGGGCS-CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEEhhhhHhcC-CHHHHHHHHHHHcCCCCEEEEEE
Confidence 9999999997775 46899999999999999999974
No 3
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.44 E-value=3.7e-13 Score=130.08 Aligned_cols=99 Identities=17% Similarity=0.103 Sum_probs=83.7
Q ss_pred CCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCCCeeEEEecccccccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSRAFDMAHCSRCLIPWN 289 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h~~ 289 (626)
+.+|||||||+|.++..|+++ .++++|+++ .+++.++++...+.+..+|...+++++++||+|++..+++|+.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~-----~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 116 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGHQIEGLEPAT-----RLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMG 116 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTCCEEEECCCH-----HHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCC
T ss_pred CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCH-----HHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCC
Confidence 457999999999999999987 577777654 5666777776678888889888999899999999999998876
Q ss_pred -ccHHHHHHHHHhcccCCeEEEEEeCC
Q 006905 290 -QFGGIYLIEVDRVLRPGGYWILSGPP 315 (626)
Q Consensus 290 -~~~~~~L~Ei~RvLKPGG~lvis~pp 315 (626)
++...+|+++.++|||||++++..+.
T Consensus 117 ~~~~~~~l~~~~~~L~pgG~l~i~~~~ 143 (203)
T 3h2b_A 117 PGELPDALVALRMAVEDGGGLLMSFFS 143 (203)
T ss_dssp TTTHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEEcc
Confidence 35589999999999999999998743
No 4
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.43 E-value=4.1e-13 Score=137.08 Aligned_cols=112 Identities=17% Similarity=0.129 Sum_probs=81.6
Q ss_pred HHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC------CcEEEeCCccchHHHHHHHHHHcC--CCeEEEEcccccCCC
Q 006905 200 DIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR------NIITMSFAPRDTHEAQVQFALERG--VPALIGVLAAERLPY 271 (626)
Q Consensus 200 ~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~------~V~avdis~~dls~a~i~~A~erg--~~~~~~v~d~~~Lpf 271 (626)
.+..++.....++.+|||||||+|.++..|+++ .|+++|+++.++..+..+.. ..+ .++.+..+|...+|+
T Consensus 59 ~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~-~~~~~~~v~~~~~D~~~~~~ 137 (261)
T 4gek_A 59 MIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHID-AYKAPTPVDVIEGDIRDIAI 137 (261)
T ss_dssp HHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHH-TSCCSSCEEEEESCTTTCCC
T ss_pred HHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHH-hhccCceEEEeecccccccc
Confidence 334444322334569999999999999999875 47888887765554443332 223 357788888888887
Q ss_pred CCCCeeEEEeccccccccccH-HHHHHHHHhcccCCeEEEEEeC
Q 006905 272 PSRAFDMAHCSRCLIPWNQFG-GIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 272 ~d~sFDlV~~~~~l~h~~~~~-~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+ .||+|+++.+++++.... ..+|+++.|+|||||.|+++..
T Consensus 138 ~--~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 138 E--NASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp C--SEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred c--ccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEec
Confidence 4 599999999996665432 5789999999999999999753
No 5
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.43 E-value=2e-13 Score=133.50 Aligned_cols=101 Identities=8% Similarity=-0.036 Sum_probs=75.2
Q ss_pred CCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHH------------cCCCeEEEEcccccCCCCC-CCe
Q 006905 212 IRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALE------------RGVPALIGVLAAERLPYPS-RAF 276 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~e------------rg~~~~~~v~d~~~Lpf~d-~sF 276 (626)
+.+|||+|||+|.++..|+++ .|+++|+++.++..+..+.... ....+.+.++|+..+++++ ++|
T Consensus 23 ~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~~f 102 (203)
T 1pjz_A 23 GARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIGHC 102 (203)
T ss_dssp TCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHHSE
T ss_pred CCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCCCE
Confidence 458999999999999999987 4777777665444332221100 1235778888999998775 899
Q ss_pred eEEEeccccccccccH-HHHHHHHHhcccCCeEEEEE
Q 006905 277 DMAHCSRCLIPWNQFG-GIYLIEVDRVLRPGGYWILS 312 (626)
Q Consensus 277 DlV~~~~~l~h~~~~~-~~~L~Ei~RvLKPGG~lvis 312 (626)
|+|++..+++|+.... ..+++++.|+|||||++++.
T Consensus 103 D~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~ 139 (203)
T 1pjz_A 103 AAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI 139 (203)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred EEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 9999998887776432 57999999999999985544
No 6
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.41 E-value=1.2e-12 Score=130.80 Aligned_cols=117 Identities=16% Similarity=0.119 Sum_probs=90.9
Q ss_pred cHHHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccc
Q 006905 193 GADAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAE 267 (626)
Q Consensus 193 ga~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~ 267 (626)
.....++.+.+.+...+ +.+|||||||+|.++..|++. .++++|+++.++..+.. .+...++ .+.+..+|..
T Consensus 20 ~~~~~~~~l~~~~~~~~--~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~-~~~~~~~~~~v~~~~~d~~ 96 (256)
T 1nkv_A 20 FTEEKYATLGRVLRMKP--GTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKR-RAEELGVSERVHFIHNDAA 96 (256)
T ss_dssp CCHHHHHHHHHHTCCCT--TCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHH-HHHHTTCTTTEEEEESCCT
T ss_pred CCHHHHHHHHHhcCCCC--CCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHH-HHHhcCCCcceEEEECChH
Confidence 34556666777665443 459999999999999998875 68888888765554333 3334454 3788888988
Q ss_pred cCCCCCCCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 268 RLPYPSRAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 268 ~Lpf~d~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
.+++ +++||+|+|..+++|+.+ ...+|+++.|+|||||++++..+
T Consensus 97 ~~~~-~~~fD~V~~~~~~~~~~~-~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 97 GYVA-NEKCDVAACVGATWIAGG-FAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp TCCC-SSCEEEEEEESCGGGTSS-SHHHHHHHTTSEEEEEEEEEEEE
T ss_pred hCCc-CCCCCEEEECCChHhcCC-HHHHHHHHHHHcCCCeEEEEecC
Confidence 8888 889999999999977654 68999999999999999999864
No 7
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.41 E-value=9e-13 Score=130.54 Aligned_cols=97 Identities=21% Similarity=0.185 Sum_probs=81.0
Q ss_pred CCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHc--CCCeEEEEcccccCCCCCCCeeEEEecccccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALER--GVPALIGVLAAERLPYPSRAFDMAHCSRCLIP 287 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~er--g~~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h 287 (626)
+.+|||||||+|.++..|+++ .++++|+++ .+++.++++ ...+.+...|...+++++++||+|++..+++|
T Consensus 54 ~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 128 (242)
T 3l8d_A 54 EAEVLDVGCGDGYGTYKLSRTGYKAVGVDISE-----VMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEW 128 (242)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCEEEEEESCH-----HHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTS
T ss_pred CCeEEEEcCCCCHHHHHHHHcCCeEEEEECCH-----HHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhh
Confidence 458999999999999999988 466666644 566666665 34577888899999999999999999999977
Q ss_pred ccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 288 WNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 288 ~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+. ++..++.++.++|||||++++..+
T Consensus 129 ~~-~~~~~l~~~~~~L~pgG~l~i~~~ 154 (242)
T 3l8d_A 129 TE-EPLRALNEIKRVLKSDGYACIAIL 154 (242)
T ss_dssp SS-CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cc-CHHHHHHHHHHHhCCCeEEEEEEc
Confidence 74 568999999999999999999864
No 8
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.40 E-value=1.7e-12 Score=126.68 Aligned_cols=144 Identities=14% Similarity=0.156 Sum_probs=98.4
Q ss_pred HHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcCC-CeEEEEcccccCCCCC
Q 006905 200 DIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERGV-PALIGVLAAERLPYPS 273 (626)
Q Consensus 200 ~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg~-~~~~~v~d~~~Lpf~d 273 (626)
.+.+.+.... +.+|||+|||+|.++..+++. .++++|+++..+..+..... ..+. .+.+...|...+++++
T Consensus 28 ~~~~~~~~~~--~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~~~~d~~~~~~~~ 104 (219)
T 3dh0_A 28 KVLKEFGLKE--GMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVN-KLGLKNVEVLKSEENKIPLPD 104 (219)
T ss_dssp HHHHHHTCCT--TCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHH-HHTCTTEEEEECBTTBCSSCS
T ss_pred HHHHHhCCCC--CCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHH-HcCCCcEEEEecccccCCCCC
Confidence 3444444333 458999999999999888765 58888887765554443333 3343 4778888898999999
Q ss_pred CCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCCCCcccccccccchhhhhHHHHHHHHHHHHhhchhhhc
Q 006905 274 RAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGPPINWKKHARGWQRTKEDLNKEQTAIENVAKSLCWEKIK 352 (626)
Q Consensus 274 ~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~pp~~w~~~~~~w~~~~e~l~~~~~~ie~l~~~l~w~~v~ 352 (626)
++||+|+++.+++|+. +...++.++.|+|||||.+++............ ..... .....+..+++..+|+.+.
T Consensus 105 ~~fD~v~~~~~l~~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~----~~~~~-~~~~~~~~~l~~~Gf~~~~ 177 (219)
T 3dh0_A 105 NTVDFIFMAFTFHELS-EPLKFLEELKRVAKPFAYLAIIDWKKEERDKGP----PPEEV-YSEWEVGLILEDAGIRVGR 177 (219)
T ss_dssp SCEEEEEEESCGGGCS-SHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSC----CGGGS-CCHHHHHHHHHHTTCEEEE
T ss_pred CCeeEEEeehhhhhcC-CHHHHHHHHHHHhCCCeEEEEEEecccccccCC----chhcc-cCHHHHHHHHHHCCCEEEE
Confidence 9999999999997775 468999999999999999999863221111000 00000 1124466667777776553
No 9
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.40 E-value=1.2e-12 Score=131.09 Aligned_cols=115 Identities=17% Similarity=0.234 Sum_probs=89.1
Q ss_pred cHHHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcC---CCeEEEEccc
Q 006905 193 GADAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERG---VPALIGVLAA 266 (626)
Q Consensus 193 ga~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg---~~~~~~v~d~ 266 (626)
+.....+.+.+.+... ++.+|||||||+|.++..|+++ .++++|+++ .+++.++++. ..+.+...|.
T Consensus 39 ~~~~~~~~~~~~~~~~--~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~~~~~~d~ 111 (266)
T 3ujc_A 39 GGLEATKKILSDIELN--ENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICS-----NIVNMANERVSGNNKIIFEANDI 111 (266)
T ss_dssp THHHHHHHHTTTCCCC--TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCH-----HHHHHHHHTCCSCTTEEEEECCT
T ss_pred chHHHHHHHHHhcCCC--CCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHHHhhcCCCeEEEECcc
Confidence 3444445555554333 3559999999999999999886 566776654 5666676654 4577888898
Q ss_pred ccCCCCCCCeeEEEecccccccc-ccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 267 ERLPYPSRAFDMAHCSRCLIPWN-QFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 267 ~~Lpf~d~sFDlV~~~~~l~h~~-~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
..+|+++++||+|++..+++|+. .+...+|.++.|+|||||.+++..+
T Consensus 112 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 112 LTKEFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp TTCCCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccCCCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 88999999999999999997774 3458999999999999999999864
No 10
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.39 E-value=2.8e-13 Score=135.14 Aligned_cols=99 Identities=15% Similarity=0.177 Sum_probs=80.2
Q ss_pred CCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcC---CCeEEEEcccccCCCCCCCeeEEEeccc
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERG---VPALIGVLAAERLPYPSRAFDMAHCSRC 284 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg---~~~~~~v~d~~~Lpf~d~sFDlV~~~~~ 284 (626)
.+.+|||||||+|.++..|+++ .++++|+++. +++.++++. ..+.+...|...+++++++||+|+|..+
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~-----~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 167 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKH-----MLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWT 167 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHH-----HHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESC
T ss_pred CCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHH-----HHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcch
Confidence 4569999999999999998876 4788888664 444554443 3467778888889998899999999999
Q ss_pred cccccc-cHHHHHHHHHhcccCCeEEEEEeC
Q 006905 285 LIPWNQ-FGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 285 l~h~~~-~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
++|+.+ +...+|.++.|+|||||++++..+
T Consensus 168 l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 168 AIYLTDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 988754 348999999999999999999864
No 11
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.39 E-value=2e-12 Score=128.92 Aligned_cols=110 Identities=23% Similarity=0.294 Sum_probs=86.2
Q ss_pred HHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCC-CeEEEEcccccCCCCCCCee
Q 006905 201 IGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGV-PALIGVLAAERLPYPSRAFD 277 (626)
Q Consensus 201 L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~-~~~~~v~d~~~Lpf~d~sFD 277 (626)
+.+.+.... +.+|||||||+|.++..+++. .++++|+++.++..+... +...+. .+.+.+.|...+|+++++||
T Consensus 13 ~~~~~~~~~--~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~v~~~~~d~~~~~~~~~~fD 89 (239)
T 1xxl_A 13 MIKTAECRA--EHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSF-AQEKGVENVRFQQGTAESLPFPDDSFD 89 (239)
T ss_dssp HHHHHTCCT--TCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHH-HHHHTCCSEEEEECBTTBCCSCTTCEE
T ss_pred HHHHhCcCC--CCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHH-HHHcCCCCeEEEecccccCCCCCCcEE
Confidence 444444443 559999999999999999887 688888877555443333 333343 47788888889999999999
Q ss_pred EEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 278 MAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 278 lV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+|+|..+++|+.+ ...+|.++.|+|||||++++..+
T Consensus 90 ~v~~~~~l~~~~~-~~~~l~~~~~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 90 IITCRYAAHHFSD-VRKAVREVARVLKQDGRFLLVDH 125 (239)
T ss_dssp EEEEESCGGGCSC-HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEECCchhhccC-HHHHHHHHHHHcCCCcEEEEEEc
Confidence 9999999977764 68999999999999999999753
No 12
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.39 E-value=2.4e-12 Score=130.21 Aligned_cols=117 Identities=18% Similarity=0.155 Sum_probs=90.6
Q ss_pred HHHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCCC--eEEEEccccc
Q 006905 194 ADAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGVP--ALIGVLAAER 268 (626)
Q Consensus 194 a~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~~--~~~~v~d~~~ 268 (626)
.......+.+.+. ...++.+|||||||+|.++..+++. .++++|+++..+..+.. .+...+++ +.+...|...
T Consensus 30 ~~~~~~~~l~~l~-~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~ 107 (267)
T 3kkz_A 30 SPEVTLKALSFID-NLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNR-NARQSGLQNRVTGIVGSMDD 107 (267)
T ss_dssp CHHHHHHHHTTCC-CCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHH-HHHHTTCTTTEEEEECCTTS
T ss_pred CHHHHHHHHHhcc-cCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHH-HHHHcCCCcCcEEEEcChhh
Confidence 3445555555554 1234569999999999999999986 68888887755544333 33344543 7888889999
Q ss_pred CCCCCCCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 269 LPYPSRAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 269 Lpf~d~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+|+++++||+|+|..+++|+ +...+++++.++|||||++++..+
T Consensus 108 ~~~~~~~fD~i~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 108 LPFRNEELDLIWSEGAIYNI--GFERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp CCCCTTCEEEEEESSCGGGT--CHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred CCCCCCCEEEEEEcCCceec--CHHHHHHHHHHHcCCCCEEEEEEe
Confidence 99999999999999999777 468999999999999999999864
No 13
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.39 E-value=1.9e-12 Score=125.47 Aligned_cols=115 Identities=17% Similarity=0.232 Sum_probs=87.7
Q ss_pred HHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccccC
Q 006905 195 DAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAERL 269 (626)
Q Consensus 195 ~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~L 269 (626)
....+.+.+.+... ..+|||+|||+|.++..|+++ .++++|+++..+..+... +...+. .+.+...|...+
T Consensus 30 ~~~~~~~~~~~~~~---~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~-~~~~~~~~~~~~~~~d~~~~ 105 (219)
T 3dlc_A 30 PIIAENIINRFGIT---AGTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKN-IADANLNDRIQIVQGDVHNI 105 (219)
T ss_dssp HHHHHHHHHHHCCC---EEEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHH-HHHTTCTTTEEEEECBTTBC
T ss_pred HHHHHHHHHhcCCC---CCEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHH-HHhccccCceEEEEcCHHHC
Confidence 33444555555433 228999999999999999885 678888877555443332 223343 477888899999
Q ss_pred CCCCCCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 270 PYPSRAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 270 pf~d~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
++++++||+|+++.+++|+ .+...+|.++.|+|||||++++...
T Consensus 106 ~~~~~~~D~v~~~~~l~~~-~~~~~~l~~~~~~L~pgG~l~~~~~ 149 (219)
T 3dlc_A 106 PIEDNYADLIVSRGSVFFW-EDVATAFREIYRILKSGGKTYIGGG 149 (219)
T ss_dssp SSCTTCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCcccccEEEECchHhhc-cCHHHHHHHHHHhCCCCCEEEEEec
Confidence 9999999999999999777 4568999999999999999999864
No 14
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.38 E-value=1.5e-12 Score=131.53 Aligned_cols=115 Identities=24% Similarity=0.372 Sum_probs=87.3
Q ss_pred HHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccccCC
Q 006905 196 AYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAERLP 270 (626)
Q Consensus 196 ~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~Lp 270 (626)
...+.+.+.+... ++.+|||||||+|.++..++++ .++++|+++..+..+.. .+...+. .+.+..+|...+|
T Consensus 48 ~~~~~l~~~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~-~~~~~~~~~~~~~~~~d~~~~~ 124 (273)
T 3bus_A 48 RLTDEMIALLDVR--SGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANA-RATAAGLANRVTFSYADAMDLP 124 (273)
T ss_dssp HHHHHHHHHSCCC--TTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHH-HHHHTTCTTTEEEEECCTTSCC
T ss_pred HHHHHHHHhcCCC--CCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHH-HHHhcCCCcceEEEECccccCC
Confidence 3444555555433 3559999999999999999874 67888887754443332 2333444 3778888888999
Q ss_pred CCCCCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 271 YPSRAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 271 f~d~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+++++||+|++..+++|+.+ ...+|.++.|+|||||++++..+
T Consensus 125 ~~~~~fD~v~~~~~l~~~~~-~~~~l~~~~~~L~pgG~l~i~~~ 167 (273)
T 3bus_A 125 FEDASFDAVWALESLHHMPD-RGRALREMARVLRPGGTVAIADF 167 (273)
T ss_dssp SCTTCEEEEEEESCTTTSSC-HHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCCCCccEEEEechhhhCCC-HHHHHHHHHHHcCCCeEEEEEEe
Confidence 99999999999999977654 58999999999999999999864
No 15
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.38 E-value=1.6e-12 Score=133.46 Aligned_cols=116 Identities=16% Similarity=0.243 Sum_probs=89.1
Q ss_pred HHHHHHHHHhh----ccCCCCCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcc
Q 006905 195 DAYIDDIGKLI----NLNDGSIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGV--PALIGVLA 265 (626)
Q Consensus 195 ~~yi~~L~~ll----~l~~~~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d 265 (626)
....+.+.+.+ ... ++.+|||||||+|.++..|++. .++++|+++.++..+... +...+. .+.+..+|
T Consensus 64 ~~~~~~l~~~l~~~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~~~~~~~~~d 140 (297)
T 2o57_A 64 LRTDEWLASELAMTGVLQ--RQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEY-NNQAGLADNITVKYGS 140 (297)
T ss_dssp HHHHHHHHHHHHHTTCCC--TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHH-HHHHTCTTTEEEEECC
T ss_pred HHHHHHHHHHhhhccCCC--CCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHH-HHhcCCCcceEEEEcC
Confidence 33445555555 333 3559999999999999999875 578888877555433322 223343 47788889
Q ss_pred cccCCCCCCCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 266 AERLPYPSRAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 266 ~~~Lpf~d~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
...+|+++++||+|++..+++|+.+ ...+|.++.|+|||||+|++..+
T Consensus 141 ~~~~~~~~~~fD~v~~~~~l~~~~~-~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 141 FLEIPCEDNSYDFIWSQDAFLHSPD-KLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp TTSCSSCTTCEEEEEEESCGGGCSC-HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccCCCCCCCEeEEEecchhhhcCC-HHHHHHHHHHHcCCCeEEEEEEe
Confidence 9999999999999999999988765 68999999999999999999864
No 16
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.38 E-value=1.9e-12 Score=129.46 Aligned_cols=117 Identities=15% Similarity=0.154 Sum_probs=89.7
Q ss_pred HHHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCCC--eEEEEccccc
Q 006905 194 ADAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGVP--ALIGVLAAER 268 (626)
Q Consensus 194 a~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~~--~~~~v~d~~~ 268 (626)
.......+.+.+.. ..++.+|||||||+|.++..+++. .++++|+++..+..+. +.+...++. +.+...|...
T Consensus 30 ~~~~~~~~l~~l~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~~~~~~~d~~~ 107 (257)
T 3f4k_A 30 SPEATRKAVSFINE-LTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFN-ENAVKANCADRVKGITGSMDN 107 (257)
T ss_dssp CHHHHHHHHTTSCC-CCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHH-HHHHHTTCTTTEEEEECCTTS
T ss_pred CHHHHHHHHHHHhc-CCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHH-HHHHHcCCCCceEEEECChhh
Confidence 34455555555531 123458999999999999999886 6888888875554433 333344544 7788889999
Q ss_pred CCCCCCCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 269 LPYPSRAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 269 Lpf~d~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+|+++++||+|+|..+++|. +...++.++.|+|||||++++..+
T Consensus 108 ~~~~~~~fD~v~~~~~l~~~--~~~~~l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 108 LPFQNEELDLIWSEGAIYNI--GFERGMNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp CSSCTTCEEEEEEESCSCCC--CHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCCCCCCEEEEEecChHhhc--CHHHHHHHHHHHcCCCcEEEEEEe
Confidence 99999999999999999777 468999999999999999999864
No 17
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.37 E-value=5.2e-13 Score=132.96 Aligned_cols=113 Identities=14% Similarity=0.160 Sum_probs=85.6
Q ss_pred HHHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccC--
Q 006905 194 ADAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERL-- 269 (626)
Q Consensus 194 a~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~L-- 269 (626)
.....+.+...++... ++.+|||||||+|.++..|++. .++++|++ +.+++.++++ +.+...|...+
T Consensus 25 ~~~~~~~~~~~l~~~~-~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s-----~~~~~~a~~~---~~~~~~d~~~~~~ 95 (240)
T 3dli_A 25 RELVKARLRRYIPYFK-GCRRVLDIGCGRGEFLELCKEEGIESIGVDIN-----EDMIKFCEGK---FNVVKSDAIEYLK 95 (240)
T ss_dssp HHHHHHHHGGGGGGTT-TCSCEEEETCTTTHHHHHHHHHTCCEEEECSC-----HHHHHHHHTT---SEEECSCHHHHHH
T ss_pred HHHHHHHHHHHHhhhc-CCCeEEEEeCCCCHHHHHHHhCCCcEEEEECC-----HHHHHHHHhh---cceeeccHHHHhh
Confidence 4445555555554322 2458999999999999999886 56666664 4566677666 56666776654
Q ss_pred CCCCCCeeEEEecccccccccc-HHHHHHHHHhcccCCeEEEEEeCC
Q 006905 270 PYPSRAFDMAHCSRCLIPWNQF-GGIYLIEVDRVLRPGGYWILSGPP 315 (626)
Q Consensus 270 pf~d~sFDlV~~~~~l~h~~~~-~~~~L~Ei~RvLKPGG~lvis~pp 315 (626)
|+++++||+|+|..+++|+... ...+|.++.|+|||||++++..+.
T Consensus 96 ~~~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 96 SLPDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp TSCTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEEC
T ss_pred hcCCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 7889999999999999887642 389999999999999999998754
No 18
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.37 E-value=5.3e-12 Score=123.58 Aligned_cols=115 Identities=11% Similarity=0.088 Sum_probs=83.3
Q ss_pred HHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCC------CeEEEEcc
Q 006905 196 AYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGV------PALIGVLA 265 (626)
Q Consensus 196 ~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~------~~~~~v~d 265 (626)
...+.+.+.+.... ..+|||||||+|.++..|+++ .++++|+++.++..+..+.. ..+. .+.+...|
T Consensus 16 ~~~~~l~~~l~~~~--~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~-~~~~~~~~~~~v~~~~~d 92 (219)
T 3jwg_A 16 QRLGTVVAVLKSVN--AKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLK-IDRLPEMQRKRISLFQSS 92 (219)
T ss_dssp HHHHHHHHHHHHTT--CCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHT-GGGSCHHHHTTEEEEECC
T ss_pred HHHHHHHHHHhhcC--CCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHH-hhccccccCcceEEEeCc
Confidence 33445555554333 458999999999999999875 57888887654443332221 1122 46788888
Q ss_pred cccCCCCCCCeeEEEeccccccccccH-HHHHHHHHhcccCCeEEEEEe
Q 006905 266 AERLPYPSRAFDMAHCSRCLIPWNQFG-GIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 266 ~~~Lpf~d~sFDlV~~~~~l~h~~~~~-~~~L~Ei~RvLKPGG~lvis~ 313 (626)
...+++++++||+|+|..+++|+.+.. ..+++++.++|||||.++...
T Consensus 93 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 93 LVYRDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp SSSCCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred ccccccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEcc
Confidence 878888888999999999998875432 689999999999999666553
No 19
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.36 E-value=3.3e-12 Score=127.88 Aligned_cols=96 Identities=18% Similarity=0.180 Sum_probs=78.7
Q ss_pred CCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHc----CCCeEEEEcccccCCCCCCCeeEEEeccc
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALER----GVPALIGVLAAERLPYPSRAFDMAHCSRC 284 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~er----g~~~~~~v~d~~~Lpf~d~sFDlV~~~~~ 284 (626)
++.+|||||||+|.++..|+++ .++++|+++ .+++.++++ ...+.+...|...+|+++++||+|+++.+
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 113 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIARGYRYIALDADA-----AMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHL 113 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTTTCEEEEEESCH-----HHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESC
T ss_pred CCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCc
Confidence 3569999999999999999887 567777755 444455444 34577888898899999999999999999
Q ss_pred cccccccHHHHHHHHHhcccCCeEEEEE
Q 006905 285 LIPWNQFGGIYLIEVDRVLRPGGYWILS 312 (626)
Q Consensus 285 l~h~~~~~~~~L~Ei~RvLKPGG~lvis 312 (626)
++|+. +...++.++.|+|||||.+++.
T Consensus 114 l~~~~-~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 114 WHLVP-DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GGGCT-THHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhcC-CHHHHHHHHHHHCCCCcEEEEE
Confidence 95554 5689999999999999999997
No 20
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.36 E-value=2.5e-12 Score=125.60 Aligned_cols=96 Identities=13% Similarity=0.124 Sum_probs=77.7
Q ss_pred CCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCC-CeEEEEcccccCCCCCCCeeEEEeccccccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGV-PALIGVLAAERLPYPSRAFDMAHCSRCLIPW 288 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~-~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h~ 288 (626)
+.+|||||||+|.++..|+++ .++++|+++ .+++.++++.. .+.+..+|...++++ ++||+|+|..+++|+
T Consensus 46 ~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~ 119 (220)
T 3hnr_A 46 FGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSR-----EMRMIAKEKLPKEFSITEGDFLSFEVP-TSIDTIVSTYAFHHL 119 (220)
T ss_dssp CSEEEEECCTTSHHHHHHHHTTCEEEEECSCH-----HHHHHHHHHSCTTCCEESCCSSSCCCC-SCCSEEEEESCGGGS
T ss_pred CCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCH-----HHHHHHHHhCCCceEEEeCChhhcCCC-CCeEEEEECcchhcC
Confidence 558999999999999999987 456666644 55666665533 566777888888888 899999999999777
Q ss_pred cccHHH--HHHHHHhcccCCeEEEEEeC
Q 006905 289 NQFGGI--YLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 289 ~~~~~~--~L~Ei~RvLKPGG~lvis~p 314 (626)
.+ +.. +|.++.|+|||||.+++..+
T Consensus 120 ~~-~~~~~~l~~~~~~LkpgG~l~i~~~ 146 (220)
T 3hnr_A 120 TD-DEKNVAIAKYSQLLNKGGKIVFADT 146 (220)
T ss_dssp CH-HHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred Ch-HHHHHHHHHHHHhcCCCCEEEEEec
Confidence 65 444 99999999999999999864
No 21
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.36 E-value=9.9e-13 Score=131.02 Aligned_cols=104 Identities=13% Similarity=0.135 Sum_probs=78.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCCCeeEEEecccccc
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSRAFDMAHCSRCLIP 287 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h 287 (626)
+..+|||||||+|.++..|+++ .++++|+++.++..+...........+.+...|...+++++++||+|++..+++|
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 158 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGH 158 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhhh
Confidence 3569999999999999998876 5788888665443332222111122356777888888888889999999999977
Q ss_pred ccccH-HHHHHHHHhcccCCeEEEEEeC
Q 006905 288 WNQFG-GIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 288 ~~~~~-~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+.+.. ..+|.++.|+|||||++++..+
T Consensus 159 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 186 (241)
T 2ex4_A 159 LTDQHLAEFLRRCKGSLRPNGIIVIKDN 186 (241)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEEc
Confidence 76532 4899999999999999999764
No 22
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.35 E-value=2.1e-12 Score=127.56 Aligned_cols=97 Identities=15% Similarity=0.096 Sum_probs=79.2
Q ss_pred CCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCC-CeEEEEcccccCCCCCCCeeEEEeccccccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGV-PALIGVLAAERLPYPSRAFDMAHCSRCLIPW 288 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~-~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h~ 288 (626)
+.+|||||||+|.++..|+++ .++++|+++ .+++.|+++.. .+.+...|...+ +++++||+|+|..+++|+
T Consensus 43 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~-----~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~ 116 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQEHFNDITCVEASE-----EAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTHVLEHI 116 (250)
T ss_dssp SSCEEEESCTTSHHHHHHTTTCSCEEEEESCH-----HHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEESCGGGC
T ss_pred CCcEEEECCCCCHHHHHHHHhCCcEEEEeCCH-----HHHHHHHHhhhCCeEEEEccHHHc-CcCCcccEEEEhhHHHhh
Confidence 447999999999999999887 677777755 45556655533 577778887777 467899999999999777
Q ss_pred cccHHHHHHHHH-hcccCCeEEEEEeCC
Q 006905 289 NQFGGIYLIEVD-RVLRPGGYWILSGPP 315 (626)
Q Consensus 289 ~~~~~~~L~Ei~-RvLKPGG~lvis~pp 315 (626)
.+ +..+|+++. |+|||||++++..+.
T Consensus 117 ~~-~~~~l~~~~~~~LkpgG~l~i~~~~ 143 (250)
T 2p7i_A 117 DD-PVALLKRINDDWLAEGGRLFLVCPN 143 (250)
T ss_dssp SS-HHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred cC-HHHHHHHHHHHhcCCCCEEEEEcCC
Confidence 54 689999999 999999999998753
No 23
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.35 E-value=3.4e-12 Score=129.62 Aligned_cols=97 Identities=13% Similarity=0.070 Sum_probs=76.4
Q ss_pred CCEEEEeCCCCchHHHHHhhCC--cEEEeCCccchHHHHHHHHHHc----------------------CCCeEEEEcccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSRN--IITMSFAPRDTHEAQVQFALER----------------------GVPALIGVLAAE 267 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~~--V~avdis~~dls~a~i~~A~er----------------------g~~~~~~v~d~~ 267 (626)
+.+|||+|||+|..+..|++++ |+++|+++.++ +.|+++ +..+.+.++|+.
T Consensus 69 ~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i-----~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~ 143 (252)
T 2gb4_A 69 GLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGI-----REFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIF 143 (252)
T ss_dssp SCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHH-----HHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTT
T ss_pred CCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHH-----HHHHHhcccccccccccccccccccccCCCceEEEECccc
Confidence 4589999999999999999985 67777766444 444322 245788889998
Q ss_pred cCCCCC-CCeeEEEeccccccccccH-HHHHHHHHhcccCCeEEEEEe
Q 006905 268 RLPYPS-RAFDMAHCSRCLIPWNQFG-GIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 268 ~Lpf~d-~sFDlV~~~~~l~h~~~~~-~~~L~Ei~RvLKPGG~lvis~ 313 (626)
.+++++ ++||+|++..++++..... ..++.++.|+|||||.|++.+
T Consensus 144 ~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~ 191 (252)
T 2gb4_A 144 DLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV 191 (252)
T ss_dssp TGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 888764 8999999998887776433 679999999999999997643
No 24
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.35 E-value=5.4e-12 Score=124.99 Aligned_cols=99 Identities=16% Similarity=0.127 Sum_probs=76.5
Q ss_pred CCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcC------CCeEEEEcccccCCCCCCCeeEEEecc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERG------VPALIGVLAAERLPYPSRAFDMAHCSR 283 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg------~~~~~~v~d~~~Lpf~d~sFDlV~~~~ 283 (626)
..+|||||||+|.++..|++. .++++|+++. +++.++++. ..+.+.++|...++ ++++||+|+++.
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~-----~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~ 140 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASPERFVVGLDISES-----ALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYV 140 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBTTEEEEEECSCHH-----HHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEES
T ss_pred CCCEEEeCCCCCHHHHHHHhCCCeEEEEECCHH-----HHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEECh
Confidence 348999999999999999887 4677777654 444444332 23678888887777 456999999999
Q ss_pred ccccccc-cHHHHHHHHHhcccCCeEEEEEeCCC
Q 006905 284 CLIPWNQ-FGGIYLIEVDRVLRPGGYWILSGPPI 316 (626)
Q Consensus 284 ~l~h~~~-~~~~~L~Ei~RvLKPGG~lvis~pp~ 316 (626)
+++++.. +...++.++.++|||||+|++...+.
T Consensus 141 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 174 (235)
T 3lcc_A 141 FFCAIEPEMRPAWAKSMYELLKPDGELITLMYPI 174 (235)
T ss_dssp STTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred hhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecc
Confidence 9977753 34889999999999999999987544
No 25
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.34 E-value=3.6e-12 Score=127.55 Aligned_cols=98 Identities=17% Similarity=0.172 Sum_probs=81.1
Q ss_pred CCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcC--CCeEEEEcccccCCCCCCCeeEEEecccc
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERG--VPALIGVLAAERLPYPSRAFDMAHCSRCL 285 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg--~~~~~~v~d~~~Lpf~d~sFDlV~~~~~l 285 (626)
.+.+|||||||+|.++..|++. .++++|+++ .+++.++++. ..+.+..+|...+++++++||+|+|+.++
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 118 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSE-----RMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLAL 118 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCH-----HHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCG
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCH-----HHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhh
Confidence 4569999999999999999987 466777755 4555565543 45778888999999999999999999999
Q ss_pred ccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 286 IPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 286 ~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+|+ .+...+|+++.|+|||||.++++.+
T Consensus 119 ~~~-~~~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 119 HYI-ASFDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp GGC-SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhh-hhHHHHHHHHHHHcCCCcEEEEEeC
Confidence 776 5579999999999999999999853
No 26
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.34 E-value=2.9e-12 Score=129.39 Aligned_cols=98 Identities=26% Similarity=0.425 Sum_probs=80.4
Q ss_pred CCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCCCeeEEEeccccccc
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSRAFDMAHCSRCLIPW 288 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h~ 288 (626)
.+.+|||||||+|.++..|++. .++++|+++ .+++.++++.... +...|...+|+++++||+|++..+++|+
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~-----~~l~~a~~~~~~~-~~~~d~~~~~~~~~~fD~v~~~~~~~~~ 127 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSK-----EMLEVAREKGVKN-VVEAKAEDLPFPSGAFEAVLALGDVLSY 127 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCH-----HHHHHHHHHTCSC-EEECCTTSCCSCTTCEEEEEECSSHHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCH-----HHHHHHHhhcCCC-EEECcHHHCCCCCCCEEEEEEcchhhhc
Confidence 4568999999999999999987 466666654 5556666554332 6677888899989999999999888888
Q ss_pred cccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 289 NQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 289 ~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
..+...+|.++.|+|||||.+++..+
T Consensus 128 ~~~~~~~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 128 VENKDKAFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccHHHHHHHHHHHcCCCeEEEEEeC
Confidence 76689999999999999999999865
No 27
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.34 E-value=4.3e-12 Score=127.91 Aligned_cols=110 Identities=14% Similarity=0.164 Sum_probs=84.0
Q ss_pred HHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhCC--cEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCCC
Q 006905 198 IDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSRN--IITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSRA 275 (626)
Q Consensus 198 i~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~~--V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~s 275 (626)
.+.+.+++........+|||||||+|.++..|++++ ++++|+++ .+++.|+++...+.+..+|...+++ +++
T Consensus 37 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~-----~~~~~a~~~~~~~~~~~~d~~~~~~-~~~ 110 (263)
T 3pfg_A 37 AADLAALVRRHSPKAASLLDVACGTGMHLRHLADSFGTVEGLELSA-----DMLAIARRRNPDAVLHHGDMRDFSL-GRR 110 (263)
T ss_dssp HHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHTTTSSEEEEEESCH-----HHHHHHHHHCTTSEEEECCTTTCCC-SCC
T ss_pred HHHHHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCH-----HHHHHHHhhCCCCEEEECChHHCCc-cCC
Confidence 334444443222234689999999999999999874 66666654 5666776665567888889888887 789
Q ss_pred eeEEEecc-ccccccc--cHHHHHHHHHhcccCCeEEEEEe
Q 006905 276 FDMAHCSR-CLIPWNQ--FGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 276 FDlV~~~~-~l~h~~~--~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
||+|+|.. +++|+.. +...+|.++.++|||||+|++..
T Consensus 111 fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 111 FSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp EEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred cCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 99999998 8877653 44789999999999999999973
No 28
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.33 E-value=2.9e-12 Score=129.57 Aligned_cols=109 Identities=18% Similarity=0.166 Sum_probs=86.5
Q ss_pred HHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCC
Q 006905 196 AYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPS 273 (626)
Q Consensus 196 ~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d 273 (626)
.+.+.+.+.+.... +.+|||||||+|.++..|++. .++++|+++ .+++.++++. .+.+.+.|...+|+++
T Consensus 21 ~~~~~l~~~~~~~~--~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~-----~~~~~a~~~~-~~~~~~~d~~~~~~~~ 92 (261)
T 3ege_A 21 RIVNAIINLLNLPK--GSVIADIGAGTGGYSVALANQGLFVYAVEPSI-----VMRQQAVVHP-QVEWFTGYAENLALPD 92 (261)
T ss_dssp HHHHHHHHHHCCCT--TCEEEEETCTTSHHHHHHHTTTCEEEEECSCH-----HHHHSSCCCT-TEEEECCCTTSCCSCT
T ss_pred HHHHHHHHHhCCCC--CCEEEEEcCcccHHHHHHHhCCCEEEEEeCCH-----HHHHHHHhcc-CCEEEECchhhCCCCC
Confidence 45566666665433 569999999999999999987 466666654 5555554444 6788888999999999
Q ss_pred CCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 274 RAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 274 ~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
++||+|+|..+++|+ .+...+++++.|+|| ||++++..+
T Consensus 93 ~~fD~v~~~~~l~~~-~~~~~~l~~~~~~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 93 KSVDGVISILAIHHF-SHLEKSFQEMQRIIR-DGTIVLLTF 131 (261)
T ss_dssp TCBSEEEEESCGGGC-SSHHHHHHHHHHHBC-SSCEEEEEE
T ss_pred CCEeEEEEcchHhhc-cCHHHHHHHHHHHhC-CcEEEEEEc
Confidence 999999999999777 456999999999999 998888654
No 29
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.33 E-value=5.6e-12 Score=122.51 Aligned_cols=98 Identities=23% Similarity=0.279 Sum_probs=80.7
Q ss_pred CCCEEEEeCCCCchHHHHHhhC-CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCCCeeEEEecccccccc
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR-NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSRAFDMAHCSRCLIPWN 289 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~-~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h~~ 289 (626)
++.+|||||||+|.++..+ .. .++++|+++ .+++.++++...+.+...|...+|+++++||+|++..+++|..
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 109 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-PYPQKVGVEPSE-----AMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVE 109 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-CCSEEEEECCCH-----HHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTCS
T ss_pred CCCeEEEECCCCCHhHHhC-CCCeEEEEeCCH-----HHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhcC
Confidence 4669999999999999988 44 678887765 4555666554456777788888999999999999999997765
Q ss_pred ccHHHHHHHHHhcccCCeEEEEEeCC
Q 006905 290 QFGGIYLIEVDRVLRPGGYWILSGPP 315 (626)
Q Consensus 290 ~~~~~~L~Ei~RvLKPGG~lvis~pp 315 (626)
++..++.++.|+|||||.++++.+.
T Consensus 110 -~~~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 110 -DVERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp -CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -CHHHHHHHHHHHcCCCCEEEEEecC
Confidence 5689999999999999999998753
No 30
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.32 E-value=9.8e-12 Score=118.96 Aligned_cols=109 Identities=15% Similarity=0.242 Sum_probs=82.9
Q ss_pred HHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCC-CeEEEEcccccCCCCCCCee
Q 006905 201 IGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGV-PALIGVLAAERLPYPSRAFD 277 (626)
Q Consensus 201 L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~-~~~~~v~d~~~Lpf~d~sFD 277 (626)
+.+.+.... +.+|||+|||+|.++..|++. .++++|+++..+..+.... ...+. .+.+...|...+++ +++||
T Consensus 24 l~~~~~~~~--~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~~d~~~~~~-~~~~D 99 (199)
T 2xvm_A 24 VLEAVKVVK--PGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIK-SIENLDNLHTRVVDLNNLTF-DRQYD 99 (199)
T ss_dssp HHHHTTTSC--SCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-HHHTCTTEEEEECCGGGCCC-CCCEE
T ss_pred HHHHhhccC--CCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHH-HhCCCCCcEEEEcchhhCCC-CCCce
Confidence 444444333 459999999999999999887 5788888775554443332 23344 57788888888888 78999
Q ss_pred EEEeccccccccc-cHHHHHHHHHhcccCCeEEEEEe
Q 006905 278 MAHCSRCLIPWNQ-FGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 278 lV~~~~~l~h~~~-~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
+|+++.+++|+.. +...++.++.++|||||++++..
T Consensus 100 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 100 FILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp EEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 9999999977753 34889999999999999988864
No 31
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.32 E-value=4.4e-12 Score=129.49 Aligned_cols=112 Identities=19% Similarity=0.131 Sum_probs=83.9
Q ss_pred HHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccccCC-CCCCC
Q 006905 201 IGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAERLP-YPSRA 275 (626)
Q Consensus 201 L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~Lp-f~d~s 275 (626)
+.+++......+.+|||||||+|.++..|++. .++++|+++.++..+... +...++ .+.+..+|...++ +++++
T Consensus 58 l~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~ 136 (285)
T 4htf_A 58 LDRVLAEMGPQKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQA-AEAKGVSDNMQFIHCAAQDVASHLETP 136 (285)
T ss_dssp HHHHHHHTCSSCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHC-CCGGGEEEEESCGGGTGGGCSSC
T ss_pred HHHHHHhcCCCCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHH-HHhcCCCcceEEEEcCHHHhhhhcCCC
Confidence 44444433333568999999999999999987 577777776544433322 223343 3677888888887 78899
Q ss_pred eeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 276 FDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 276 FDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
||+|+|..+++|+. ++..+|.++.|+|||||++++..+
T Consensus 137 fD~v~~~~~l~~~~-~~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 137 VDLILFHAVLEWVA-DPRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp EEEEEEESCGGGCS-CHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ceEEEECchhhccc-CHHHHHHHHHHHcCCCeEEEEEEe
Confidence 99999999997765 468999999999999999999854
No 32
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.32 E-value=7e-12 Score=123.82 Aligned_cols=118 Identities=19% Similarity=0.241 Sum_probs=89.2
Q ss_pred HHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCC
Q 006905 195 DAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYP 272 (626)
Q Consensus 195 ~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~ 272 (626)
....+.+.+++.....+..+|||+|||+|.++..|++. .++++|+++.++..+..+. ...+..+.+...|...++++
T Consensus 21 ~~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~~ 99 (246)
T 1y8c_A 21 KKWSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKF-RSQGLKPRLACQDISNLNIN 99 (246)
T ss_dssp HHHHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHH-HHTTCCCEEECCCGGGCCCS
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHH-hhcCCCeEEEecccccCCcc
Confidence 44556666666544334569999999999999999887 5778888775554433332 23344677888888888877
Q ss_pred CCCeeEEEecc-cccccc--ccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 273 SRAFDMAHCSR-CLIPWN--QFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 273 d~sFDlV~~~~-~l~h~~--~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
++||+|+++. +++|+. .+...+|.++.++|||||.++++.+
T Consensus 100 -~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 100 -RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp -CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred -CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 8899999998 997774 3457899999999999999999754
No 33
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.32 E-value=3.8e-12 Score=124.18 Aligned_cols=99 Identities=14% Similarity=0.305 Sum_probs=78.7
Q ss_pred CCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcC---CCeEEEEcccccCCCCCCCeeEEEecccc
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERG---VPALIGVLAAERLPYPSRAFDMAHCSRCL 285 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg---~~~~~~v~d~~~Lpf~d~sFDlV~~~~~l 285 (626)
...+|||||||+|.++..|++. .++++|+++. +++.++++. ..+.+...|...++ ++++||+|+|+.++
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~-----~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l 124 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPR-----AIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVVAEVL 124 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHH-----HHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEEESCG
T ss_pred CCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHH-----HHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEEccHH
Confidence 3568999999999999999987 5777777654 444554432 25678888888888 67899999999999
Q ss_pred ccccccH--HHHHHHHHhcccCCeEEEEEeCC
Q 006905 286 IPWNQFG--GIYLIEVDRVLRPGGYWILSGPP 315 (626)
Q Consensus 286 ~h~~~~~--~~~L~Ei~RvLKPGG~lvis~pp 315 (626)
+|+.+.. ..+|.++.++|||||+++++.+.
T Consensus 125 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 125 YYLEDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp GGSSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred HhCCCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 7776432 57899999999999999998653
No 34
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.32 E-value=3.2e-12 Score=124.37 Aligned_cols=98 Identities=19% Similarity=0.217 Sum_probs=76.8
Q ss_pred CCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCCCeeEEEecccccccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSRAFDMAHCSRCLIPWN 289 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h~~ 289 (626)
+.+|||||||+|.++..|+++ .++++|+++ .+++.++++. .+.+..++...++ ++++||+|+|+.+++|+.
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~-----~~~~~a~~~~-~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~ 116 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAAGFDVDATDGSP-----ELAAEASRRL-GRPVRTMLFHQLD-AIDAYDAVWAHACLLHVP 116 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHH-TSCCEECCGGGCC-CCSCEEEEEECSCGGGSC
T ss_pred CCcEEEECCCCCHHHHHHHHcCCeEEEECCCH-----HHHHHHHHhc-CCceEEeeeccCC-CCCcEEEEEecCchhhcC
Confidence 458999999999999999987 566777655 4555555441 2345566777888 788999999999998876
Q ss_pred c-cHHHHHHHHHhcccCCeEEEEEeCCC
Q 006905 290 Q-FGGIYLIEVDRVLRPGGYWILSGPPI 316 (626)
Q Consensus 290 ~-~~~~~L~Ei~RvLKPGG~lvis~pp~ 316 (626)
. +...+|+++.|+|||||++++..++.
T Consensus 117 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 144 (211)
T 3e23_A 117 RDELADVLKLIWRALKPGGLFYASYKSG 144 (211)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEcCC
Confidence 3 34789999999999999999986543
No 35
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.31 E-value=4.6e-12 Score=126.72 Aligned_cols=107 Identities=18% Similarity=0.165 Sum_probs=84.0
Q ss_pred HHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCC
Q 006905 199 DDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSR 274 (626)
Q Consensus 199 ~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~ 274 (626)
..+.+.+.. ..+.+|||||||+|.++..++++ .++++|+++ .+++.++++...+.+...|...++ +++
T Consensus 23 ~~l~~~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~-----~~~~~a~~~~~~~~~~~~d~~~~~-~~~ 94 (259)
T 2p35_A 23 RDLLAQVPL--ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDD-----DMLEKAADRLPNTNFGKADLATWK-PAQ 94 (259)
T ss_dssp HHHHTTCCC--SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCH-----HHHHHHHHHSTTSEEEECCTTTCC-CSS
T ss_pred HHHHHhcCC--CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCH-----HHHHHHHHhCCCcEEEECChhhcC-ccC
Confidence 344444433 23458999999999999988875 688888765 455566655556788888988888 788
Q ss_pred CeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 275 AFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 275 sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+||+|+++.+++|+ .+...+|.++.|+|||||++++..+
T Consensus 95 ~fD~v~~~~~l~~~-~~~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 95 KADLLYANAVFQWV-PDHLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp CEEEEEEESCGGGS-TTHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred CcCEEEEeCchhhC-CCHHHHHHHHHHhcCCCeEEEEEeC
Confidence 99999999999555 5578999999999999999999864
No 36
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.31 E-value=1.2e-11 Score=121.05 Aligned_cols=102 Identities=21% Similarity=0.294 Sum_probs=79.6
Q ss_pred CCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCCCeeEEEecccccccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSRAFDMAHCSRCLIPWN 289 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h~~ 289 (626)
..+|||+|||+|.++..++++ .++++|+++..+..+... ....+..+.+...|...+++++++||+|+++.+++++.
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~ 117 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREY-AKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHFE 117 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGGCC
T ss_pred CCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHH-HHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHhCC
Confidence 568999999999999999887 578888877554433332 23334567888888888888888999999998843332
Q ss_pred -ccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 290 -QFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 290 -~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
.+...++.++.++|||||.+++..+
T Consensus 118 ~~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 118 PLELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEec
Confidence 3447899999999999999999864
No 37
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.31 E-value=7.1e-12 Score=122.65 Aligned_cols=114 Identities=15% Similarity=0.116 Sum_probs=83.1
Q ss_pred HHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCC------CeEEEEccc
Q 006905 197 YIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGV------PALIGVLAA 266 (626)
Q Consensus 197 yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~------~~~~~v~d~ 266 (626)
..+.+.+.+.... ..+|||||||+|.++..|+++ .++++|+++.++..+..+. ...+. .+.+..+|.
T Consensus 17 ~~~~l~~~l~~~~--~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~~~~~v~~~~~d~ 93 (217)
T 3jwh_A 17 RMNGVVAALKQSN--ARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERL-DRLRLPRNQWERLQLIQGAL 93 (217)
T ss_dssp HHHHHHHHHHHTT--CCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHH-TTCCCCHHHHTTEEEEECCT
T ss_pred HHHHHHHHHHhcC--CCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHH-HHhcCCcccCcceEEEeCCc
Confidence 3445555555443 458999999999999999875 5788888775444333222 12222 477778888
Q ss_pred ccCCCCCCCeeEEEeccccccccccH-HHHHHHHHhcccCCeEEEEEe
Q 006905 267 ERLPYPSRAFDMAHCSRCLIPWNQFG-GIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 267 ~~Lpf~d~sFDlV~~~~~l~h~~~~~-~~~L~Ei~RvLKPGG~lvis~ 313 (626)
..+++++++||+|+|+.+++|+.+.. ..+++++.|+|||||.+++..
T Consensus 94 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 94 TYQDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp TSCCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred ccccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 77777778999999999998775422 789999999999999777753
No 38
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.31 E-value=1e-11 Score=122.67 Aligned_cols=113 Identities=12% Similarity=0.170 Sum_probs=84.6
Q ss_pred HHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCC---CeEEEEcccc
Q 006905 195 DAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGV---PALIGVLAAE 267 (626)
Q Consensus 195 ~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~---~~~~~v~d~~ 267 (626)
....+.+.+++.. ..++.+|||||||+|.++..+++. .++++|+++ .+++.++++.. .+.+...|..
T Consensus 29 ~~~~~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~~~~~~d~~ 102 (234)
T 3dtn_A 29 DDFYGVSVSIASV-DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSE-----KMLEIAKNRFRGNLKVKYIEADYS 102 (234)
T ss_dssp HHHHHHHHHTCCC-SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCH-----HHHHHHHHHTCSCTTEEEEESCTT
T ss_pred HHHHHHHHHHhhc-CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCH-----HHHHHHHHhhccCCCEEEEeCchh
Confidence 3344455555542 234569999999999999999886 567777765 44445544421 5778888998
Q ss_pred cCCCCCCCeeEEEeccccccccccH-HHHHHHHHhcccCCeEEEEEeC
Q 006905 268 RLPYPSRAFDMAHCSRCLIPWNQFG-GIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 268 ~Lpf~d~sFDlV~~~~~l~h~~~~~-~~~L~Ei~RvLKPGG~lvis~p 314 (626)
.++++ ++||+|++..+++|+.+.. ..+|+++.|+|||||.+++..+
T Consensus 103 ~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 149 (234)
T 3dtn_A 103 KYDFE-EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADL 149 (234)
T ss_dssp TCCCC-SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccCCC-CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 88887 8999999999997775432 3699999999999999999864
No 39
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.30 E-value=1.7e-11 Score=116.86 Aligned_cols=103 Identities=13% Similarity=0.107 Sum_probs=73.1
Q ss_pred CCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCC-CeEEEEcccccCC-CCCCCeeEEEeccccc
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGV-PALIGVLAAERLP-YPSRAFDMAHCSRCLI 286 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~-~~~~~v~d~~~Lp-f~d~sFDlV~~~~~l~ 286 (626)
++.+|||+|||+|.++..|+++ .|+++|+++.++..+..+.. +.+. .+.+...+...++ +.+++||+|+++....
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~-~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~ 100 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLS-DLGIENTELILDGHENLDHYVREPIRAAIFNLGYL 100 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHH-HHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC--
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHH-HcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCC
Confidence 4569999999999999999986 68888888866654443333 3343 4566665555543 4578899999874332
Q ss_pred cc--------cccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 287 PW--------NQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 287 h~--------~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+. ......++.++.|+|||||.+++...
T Consensus 101 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 101 PSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp ---------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence 32 22335789999999999999999864
No 40
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.30 E-value=9.8e-12 Score=129.06 Aligned_cols=101 Identities=16% Similarity=0.143 Sum_probs=82.2
Q ss_pred CCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCCC--eEEEEcccccCCCCCCCeeEEEecccc
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGVP--ALIGVLAAERLPYPSRAFDMAHCSRCL 285 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~~--~~~~v~d~~~Lpf~d~sFDlV~~~~~l 285 (626)
++.+|||||||+|.++..|+++ .++++|+++.++..+.. .+...++. +.+..+|...+|+++++||+|++..++
T Consensus 117 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 195 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNR-RARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNEST 195 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHH-HHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESCG
T ss_pred CCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-HHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCch
Confidence 3569999999999999999876 67888887755543332 33344543 788888999999999999999999999
Q ss_pred ccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 286 IPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 286 ~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+|+ + ...+|.++.|+|||||++++..+
T Consensus 196 ~~~-~-~~~~l~~~~~~LkpgG~l~~~~~ 222 (312)
T 3vc1_A 196 MYV-D-LHDLFSEHSRFLKVGGRYVTITG 222 (312)
T ss_dssp GGS-C-HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhC-C-HHHHHHHHHHHcCCCcEEEEEEc
Confidence 777 3 79999999999999999999864
No 41
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.30 E-value=6.7e-12 Score=127.87 Aligned_cols=105 Identities=14% Similarity=0.180 Sum_probs=81.7
Q ss_pred HHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCCCeeE
Q 006905 201 IGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSRAFDM 278 (626)
Q Consensus 201 L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~sFDl 278 (626)
+.+.+... ++.+|||||||+|.++..|++. .++++|+++ .+++.++++...+.+.++|...+|+ +++||+
T Consensus 49 l~~~l~~~--~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~-----~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~ 120 (279)
T 3ccf_A 49 LLQLLNPQ--PGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAA-----TMIEKARQNYPHLHFDVADARNFRV-DKPLDA 120 (279)
T ss_dssp HHHHHCCC--TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHCTTSCEEECCTTTCCC-SSCEEE
T ss_pred HHHHhCCC--CCCEEEEecCCCCHHHHHHHhCCCeEEEEECCH-----HHHHHHHhhCCCCEEEECChhhCCc-CCCcCE
Confidence 44444433 3558999999999999999886 566776655 5555666554456777888888887 579999
Q ss_pred EEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 279 AHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 279 V~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
|+++.+++|+ .++..+|.++.|+|||||++++..+
T Consensus 121 v~~~~~l~~~-~d~~~~l~~~~~~LkpgG~l~~~~~ 155 (279)
T 3ccf_A 121 VFSNAMLHWV-KEPEAAIASIHQALKSGGRFVAEFG 155 (279)
T ss_dssp EEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEcchhhhC-cCHHHHHHHHHHhcCCCcEEEEEec
Confidence 9999999555 4578999999999999999999864
No 42
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.30 E-value=8.9e-12 Score=120.97 Aligned_cols=108 Identities=12% Similarity=0.088 Sum_probs=83.2
Q ss_pred HHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcC-CCeEEEEcccccCCCCCCCe
Q 006905 200 DIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERG-VPALIGVLAAERLPYPSRAF 276 (626)
Q Consensus 200 ~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg-~~~~~~v~d~~~Lpf~d~sF 276 (626)
.+.+.+.. ...+.+|||||||+|.++..|+++ .++++|+++ .+++.+++.+ ..+.+...|...+ +++++|
T Consensus 36 ~~~~~l~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~-----~~~~~a~~~~~~~~~~~~~d~~~~-~~~~~~ 108 (218)
T 3ou2_A 36 AALERLRA-GNIRGDVLELASGTGYWTRHLSGLADRVTALDGSA-----EMIAEAGRHGLDNVEFRQQDLFDW-TPDRQW 108 (218)
T ss_dssp HHHHHHTT-TTSCSEEEEESCTTSHHHHHHHHHSSEEEEEESCH-----HHHHHHGGGCCTTEEEEECCTTSC-CCSSCE
T ss_pred HHHHHHhc-CCCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCH-----HHHHHHHhcCCCCeEEEecccccC-CCCCce
Confidence 44444432 122458999999999999999887 566666644 5666666666 4577888888777 788999
Q ss_pred eEEEecccccccccc-HHHHHHHHHhcccCCeEEEEEeC
Q 006905 277 DMAHCSRCLIPWNQF-GGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 277 DlV~~~~~l~h~~~~-~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
|+|+|+.+++|+.+. ...+|+++.|+|||||.+++..+
T Consensus 109 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 109 DAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 999999999777653 27899999999999999999864
No 43
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.30 E-value=3.9e-12 Score=130.07 Aligned_cols=118 Identities=15% Similarity=0.186 Sum_probs=87.2
Q ss_pred HHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcC----CCeEEEEccccc
Q 006905 195 DAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERG----VPALIGVLAAER 268 (626)
Q Consensus 195 ~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg----~~~~~~v~d~~~ 268 (626)
..+.+.+.+.+.... ..+|||||||+|.++..|+++ .++++|+++.++..+..+....+. ..+.+...+...
T Consensus 43 ~~~~~~l~~~l~~~~--~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~ 120 (293)
T 3thr_A 43 AEYKAWLLGLLRQHG--CHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLT 120 (293)
T ss_dssp HHHHHHHHHHHHHTT--CCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGG
T ss_pred HHHHHHHHHHhcccC--CCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhh
Confidence 556666777766543 458999999999999999998 577888776555443332211111 235566777777
Q ss_pred CC---CCCCCeeEEEec-cccccccc------cHHHHHHHHHhcccCCeEEEEEeC
Q 006905 269 LP---YPSRAFDMAHCS-RCLIPWNQ------FGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 269 Lp---f~d~sFDlV~~~-~~l~h~~~------~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
++ +++++||+|+|. .+++|+.+ +...+|+++.|+|||||+|++..+
T Consensus 121 ~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 121 LDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp HHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 77 888999999998 88877765 147899999999999999999865
No 44
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.30 E-value=1.7e-11 Score=117.68 Aligned_cols=135 Identities=14% Similarity=0.080 Sum_probs=92.4
Q ss_pred cCCceecCCCCCCCCCcHHHHHHHHHHhhcc-CCCCCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHH
Q 006905 177 EGDRFRFPGGGTMFPNGADAYIDDIGKLINL-NDGSIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFA 252 (626)
Q Consensus 177 ~ge~~~Fp~ggt~F~~ga~~yi~~L~~ll~l-~~~~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A 252 (626)
.|..+..|. ..+....+...+.+.+.+.. ...++.+|||+|||+|.++..++++ .++++|+++.++..+..+.
T Consensus 11 ~g~~l~~~~--~~~rp~~~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~- 87 (189)
T 3p9n_A 11 GGRRIAVPP--RGTRPTTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNI- 87 (189)
T ss_dssp TTCEEECCS--CCC---CHHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHH-
T ss_pred CCcEecCCC--CCCccCcHHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHH-
Confidence 345555655 22333445555566665542 1233568999999999999977775 4889999886665444433
Q ss_pred HHcCC-CeEEEEcccccCC--CCCCCeeEEEeccccccccccHHHHHHHHHh--cccCCeEEEEEeC
Q 006905 253 LERGV-PALIGVLAAERLP--YPSRAFDMAHCSRCLIPWNQFGGIYLIEVDR--VLRPGGYWILSGP 314 (626)
Q Consensus 253 ~erg~-~~~~~v~d~~~Lp--f~d~sFDlV~~~~~l~h~~~~~~~~L~Ei~R--vLKPGG~lvis~p 314 (626)
...+. .+.+..+|...++ +++++||+|+++..+++...+...++.++.+ +|+|||.+++..+
T Consensus 88 ~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 88 EALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp HHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred HHcCCCceEEEEccHHHHHhhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 33444 5777888866653 4578999999998774443555889999999 9999999999864
No 45
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.29 E-value=8e-12 Score=126.61 Aligned_cols=102 Identities=19% Similarity=0.313 Sum_probs=81.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCC-CeEEEEcccccCCCCCCCeeEEEecccc
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGV-PALIGVLAAERLPYPSRAFDMAHCSRCL 285 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~-~~~~~v~d~~~Lpf~d~sFDlV~~~~~l 285 (626)
++.+|||||||+|.++..++++ .++++|+++..+..+... +...++ .+.+...|...+++++++||+|+++.++
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 115 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKAREN-TEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVL 115 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHH-HHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESCG
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCcEEEEcccccCCCCCCCeeEEEEechh
Confidence 4569999999999999999876 578888877555433332 333444 4778888888999999999999999999
Q ss_pred ccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 286 IPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 286 ~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+|+.+ +..++.++.|+|||||++++..+
T Consensus 116 ~~~~~-~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 116 EHLQS-PEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp GGCSC-HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhcCC-HHHHHHHHHHHcCCCcEEEEEEc
Confidence 77654 68999999999999999999864
No 46
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.29 E-value=8.9e-12 Score=128.35 Aligned_cols=112 Identities=14% Similarity=0.161 Sum_probs=84.9
Q ss_pred HHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhh---C--CcEEEeCCccchHHHHHHHHHH--cCCCeEEEEccccc
Q 006905 196 AYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLS---R--NIITMSFAPRDTHEAQVQFALE--RGVPALIGVLAAER 268 (626)
Q Consensus 196 ~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~---~--~V~avdis~~dls~a~i~~A~e--rg~~~~~~v~d~~~ 268 (626)
.+.+.|..+.. .++.+|||||||+|.++..|++ . .++++|+++.++..+....... ....+.+.++|...
T Consensus 24 ~~~~~l~~~~~---~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 100 (299)
T 3g5t_A 24 DFYKMIDEYHD---GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDD 100 (299)
T ss_dssp HHHHHHHHHCC---SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTC
T ss_pred HHHHHHHHHhc---CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHh
Confidence 34444554432 3466999999999999999994 3 6788888775554433332221 14467888899988
Q ss_pred CCCCC------CCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEE
Q 006905 269 LPYPS------RAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILS 312 (626)
Q Consensus 269 Lpf~d------~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis 312 (626)
+++++ ++||+|+|+.+++|+ +...++.++.|+|||||.|++.
T Consensus 101 ~~~~~~~~~~~~~fD~V~~~~~l~~~--~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 101 FKFLGADSVDKQKIDMITAVECAHWF--DFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp CGGGCTTTTTSSCEEEEEEESCGGGS--CHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCccccccccCCCeeEEeHhhHHHHh--CHHHHHHHHHHhcCCCcEEEEE
Confidence 88877 899999999999666 6799999999999999999994
No 47
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.28 E-value=1.6e-11 Score=121.45 Aligned_cols=107 Identities=18% Similarity=0.256 Sum_probs=83.8
Q ss_pred HHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccccCCCCCC
Q 006905 200 DIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAERLPYPSR 274 (626)
Q Consensus 200 ~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~Lpf~d~ 274 (626)
.+.+++... ++.+|||||||+|.++..++++ .++++|+++ .+++.++++.. .+.+...|...++++++
T Consensus 34 ~l~~~~~~~--~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~ 106 (243)
T 3bkw_A 34 ALRAMLPEV--GGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSE-----KMLARARAAGPDTGITYERADLDKLHLPQD 106 (243)
T ss_dssp HHHHHSCCC--TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCH-----HHHHHHHHTSCSSSEEEEECCGGGCCCCTT
T ss_pred HHHHhcccc--CCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCH-----HHHHHHHHhcccCCceEEEcChhhccCCCC
Confidence 345555432 3568999999999999999887 456666644 56666666543 46777888888888889
Q ss_pred CeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 275 AFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 275 sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+||+|++..+++|+. +...+|.++.++|||||+++++.+
T Consensus 107 ~fD~v~~~~~l~~~~-~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 107 SFDLAYSSLALHYVE-DVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp CEEEEEEESCGGGCS-CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CceEEEEeccccccc-hHHHHHHHHHHhcCcCcEEEEEeC
Confidence 999999999997765 568999999999999999999863
No 48
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.27 E-value=1.1e-11 Score=126.35 Aligned_cols=100 Identities=13% Similarity=0.186 Sum_probs=76.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccccCCCCCCCeeEEEecccc
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAERLPYPSRAFDMAHCSRCL 285 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~Lpf~d~sFDlV~~~~~l 285 (626)
++.+|||||||+|.++..+++. .++++|+++..+..+.. .+...+. .+.+...|...+| ++||+|++..++
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~-~~~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~~l 139 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQ-LVANSENLRSKRVLLAGWEQFD---EPVDRIVSIGAF 139 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHH-HHHTCCCCSCEEEEESCGGGCC---CCCSEEEEESCG
T ss_pred CcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHH-HHHhcCCCCCeEEEECChhhCC---CCeeEEEEeCch
Confidence 3569999999999999998853 67788876644433222 2222233 4677777877766 789999999999
Q ss_pred cccc-ccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 286 IPWN-QFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 286 ~h~~-~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+|+. .+...+|.++.|+|||||.+++..+
T Consensus 140 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 169 (287)
T 1kpg_A 140 EHFGHERYDAFFSLAHRLLPADGVMLLHTI 169 (287)
T ss_dssp GGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred hhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 8885 3458999999999999999999864
No 49
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.27 E-value=5.8e-13 Score=143.85 Aligned_cols=115 Identities=14% Similarity=0.162 Sum_probs=85.4
Q ss_pred HHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhCCcEEEeCCccchHHHHHHHHHHcCCCeEE---EEcccccCCC
Q 006905 195 DAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSRNIITMSFAPRDTHEAQVQFALERGVPALI---GVLAAERLPY 271 (626)
Q Consensus 195 ~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~~V~avdis~~dls~a~i~~A~erg~~~~~---~v~d~~~Lpf 271 (626)
..+.+.+.+.+... ++.+|||||||+|.++..|++++..++.+ |+++.+++.|++++.+... ...+...+|+
T Consensus 93 ~~~~~~l~~~~~~~--~~~~VLDiGcG~G~~~~~l~~~g~~v~gv---D~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~ 167 (416)
T 4e2x_A 93 AMLARDFLATELTG--PDPFIVEIGCNDGIMLRTIQEAGVRHLGF---EPSSGVAAKAREKGIRVRTDFFEKATADDVRR 167 (416)
T ss_dssp HHHHHHHHHTTTCS--SSCEEEEETCTTTTTHHHHHHTTCEEEEE---CCCHHHHHHHHTTTCCEECSCCSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCC--CCCEEEEecCCCCHHHHHHHHcCCcEEEE---CCCHHHHHHHHHcCCCcceeeechhhHhhccc
Confidence 33444555554433 35599999999999999999985444433 4455677788887765442 1233556677
Q ss_pred CCCCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 006905 272 PSRAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGPP 315 (626)
Q Consensus 272 ~d~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~pp 315 (626)
++++||+|+++.+++|+. ++..+|+++.|+|||||+|++..+.
T Consensus 168 ~~~~fD~I~~~~vl~h~~-d~~~~l~~~~r~LkpgG~l~i~~~~ 210 (416)
T 4e2x_A 168 TEGPANVIYAANTLCHIP-YVQSVLEGVDALLAPDGVFVFEDPY 210 (416)
T ss_dssp HHCCEEEEEEESCGGGCT-THHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCCEEEEEECChHHhcC-CHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 789999999999998886 5799999999999999999998653
No 50
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.27 E-value=1.3e-11 Score=142.56 Aligned_cols=122 Identities=16% Similarity=0.170 Sum_probs=78.9
Q ss_pred eeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc----cceec-cccccCCCCCCccceeeeccc
Q 006905 471 RNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL----VGTYT-NWCEAMSTYPRTYDLIHADSV 541 (626)
Q Consensus 471 r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl----i~~~~-~~~e~~~~yp~t~Dlih~~~~ 541 (626)
.+|||+|||+|+|+.+++..+. -.|+.+|.++.+++.+.++ |+ +.+++ |..+-+.....+||+|.++--
T Consensus 541 ~~VLDlg~GtG~~sl~aa~~ga--~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP 618 (703)
T 3v97_A 541 KDFLNLFSYTGSATVHAGLGGA--RSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPP 618 (703)
T ss_dssp CEEEEESCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCC
T ss_pred CcEEEeeechhHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCc
Confidence 3699999999999999988765 2588999999999988765 33 12222 221111223479999998652
Q ss_pred -cccCC-------CCCCHHHHHHHhhhhccCCcEEEEEcChHHHHHHHHHHHhCCCeeEEe
Q 006905 542 -FSLYK-------DRCETEDILLEMDRILRPEGGVIFRDDVDELVKVKRIIDALKWQSQIV 594 (626)
Q Consensus 542 -f~~~~-------~~c~~~~~l~E~dRiLRPgG~~i~~d~~~~~~~~~~~~~~l~w~~~~~ 594 (626)
|.... ..-+...++.++-|+|+|||+++++-.......-.+.+....++...+
T Consensus 619 ~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~~~~l~~~g~~~~~i 679 (703)
T 3v97_A 619 TFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEI 679 (703)
T ss_dssp SBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCCCHHHHHHTTEEEEEC
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccccCHHHHHHcCCceeee
Confidence 22111 112446789999999999999999865422122234455566664443
No 51
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.26 E-value=5.2e-12 Score=129.93 Aligned_cols=102 Identities=9% Similarity=-0.006 Sum_probs=70.8
Q ss_pred CCCEEEEeCCCCchHHHH----HhhC--Cc----EEEeCCccchHHHHHHHHHHcCCC-e--EEEEcccccCC------C
Q 006905 211 SIRTAIDTGCGVASWGAY----LLSR--NI----ITMSFAPRDTHEAQVQFALERGVP-A--LIGVLAAERLP------Y 271 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~----La~~--~V----~avdis~~dls~a~i~~A~erg~~-~--~~~v~d~~~Lp------f 271 (626)
++.+|||||||+|.++.. ++.+ ++ +++|+++.++..+..+.+...+++ + .+...+.+.++ +
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcccc
Confidence 456899999999976543 3332 33 788887766654443333222332 2 23344444443 6
Q ss_pred CCCCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEe
Q 006905 272 PSRAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 272 ~d~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
++++||+|+|+.+++|+. ++..+|+++.|+|||||+|++..
T Consensus 132 ~~~~fD~V~~~~~l~~~~-d~~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 132 ELQKWDFIHMIQMLYYVK-DIPATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp CCCCEEEEEEESCGGGCS-CHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCceeEEEEeeeeeecC-CHHHHHHHHHHHcCCCcEEEEEE
Confidence 788999999999996654 57999999999999999999975
No 52
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.26 E-value=6.2e-11 Score=112.32 Aligned_cols=134 Identities=13% Similarity=0.123 Sum_probs=90.9
Q ss_pred cCCceecCCCCCCCCCc-HHHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHH
Q 006905 177 EGDRFRFPGGGTMFPNG-ADAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFAL 253 (626)
Q Consensus 177 ~ge~~~Fp~ggt~F~~g-a~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~ 253 (626)
.+..+.|......|... .+...+.+.+.+... ++.+|||+|||+|.++..+++. .++++|+++..+..+... +.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~-~~ 95 (194)
T 1dus_A 19 RGKKLKFKTDSGVFSYGKVDKGTKILVENVVVD--KDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKEN-IK 95 (194)
T ss_dssp TTEEEEEEEETTSTTTTSCCHHHHHHHHHCCCC--TTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHH-HH
T ss_pred CCCceEEEeCCCcCCccccchHHHHHHHHcccC--CCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHH-HH
Confidence 34445553333333333 224445566666543 3558999999999999999876 678888877555443332 23
Q ss_pred HcCCC---eEEEEcccccCCCCCCCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 254 ERGVP---ALIGVLAAERLPYPSRAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 254 erg~~---~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
..+.+ +.+...|... ++++++||+|+++..+++.......++.++.++|+|||.+++..+
T Consensus 96 ~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 158 (194)
T 1dus_A 96 LNNLDNYDIRVVHSDLYE-NVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQ 158 (194)
T ss_dssp HTTCTTSCEEEEECSTTT-TCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HcCCCccceEEEECchhc-ccccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 33544 6777777655 345778999999988754344457899999999999999999865
No 53
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.26 E-value=2.3e-11 Score=117.60 Aligned_cols=102 Identities=16% Similarity=0.164 Sum_probs=78.9
Q ss_pred CCEEEEeCCCCchH-HHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCCCeeEEEeccccccc
Q 006905 212 IRTAIDTGCGVASW-GAYLLSR--NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSRAFDMAHCSRCLIPW 288 (626)
Q Consensus 212 ~~~VLDIGCGtG~~-a~~La~~--~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h~ 288 (626)
..+|||+|||+|.+ ...++.. .++++|+++.++..+... +...+..+.+...|...+++++++||+|++..+++|+
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 102 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENF-SRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIFHM 102 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHH-HHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGGGS
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHH-HHhcCCceEEEECchhhCCCCCCceeEEEEcChHHhC
Confidence 45899999999987 4444444 588888877655544333 2334456677788888899988999999999999787
Q ss_pred c-ccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 289 N-QFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 289 ~-~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
. .+...++.++.|+|||||++++..+
T Consensus 103 ~~~~~~~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 103 RKNDVKEAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 4 3458899999999999999999864
No 54
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.26 E-value=2.6e-11 Score=118.02 Aligned_cols=136 Identities=17% Similarity=0.192 Sum_probs=102.3
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcccceeccccccC---CCCC-CccceeeeccccccC
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGLVGTYTNWCEAM---STYP-RTYDLIHADSVFSLY 545 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgli~~~~~~~e~~---~~yp-~t~Dlih~~~~f~~~ 545 (626)
-.+|||+|||.|.++..|++.+. +|+.+|.++.+++.+.+++.+.....-.+.+ ...+ .+||+|.+..++. .
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-~ 128 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADRGI---EAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-H 128 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC-S
T ss_pred CCEEEEeCCCCCHHHHHHHHCCC---EEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhh-h
Confidence 37899999999999999999976 7999999999999999997655544222333 2234 5699999998888 3
Q ss_pred CCCCCHHHHHHHhhhhccCCcEEEEEcCh--------------------------------HHHHHHHHHHHhCCCeeEE
Q 006905 546 KDRCETEDILLEMDRILRPEGGVIFRDDV--------------------------------DELVKVKRIIDALKWQSQI 593 (626)
Q Consensus 546 ~~~c~~~~~l~E~dRiLRPgG~~i~~d~~--------------------------------~~~~~~~~~~~~l~w~~~~ 593 (626)
.+...+|.++.|+|||||++++.+.. -....+.++++.-.+++.-
T Consensus 129 ---~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 205 (227)
T 3e8s_A 129 ---QDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVS 205 (227)
T ss_dssp ---SCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEE
T ss_pred ---hhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEE
Confidence 36689999999999999999997531 0468889999999998875
Q ss_pred eecCCCCC---CcceEEEEEec
Q 006905 594 VDHEDGPL---EREKLLFAVKL 612 (626)
Q Consensus 594 ~~~e~~~~---~~e~~l~~~K~ 612 (626)
+.....+. ...-+++++|+
T Consensus 206 ~~~~~~~~~~~~~~~~~va~k~ 227 (227)
T 3e8s_A 206 LQEPQHPQSAVPQSLLMVAERH 227 (227)
T ss_dssp EECCCCTTCSSCSCEEEEEEEC
T ss_pred EecCCCCCCCCceeEEEEeecC
Confidence 43321111 13456777774
No 55
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.25 E-value=3.2e-11 Score=123.51 Aligned_cols=116 Identities=16% Similarity=0.152 Sum_probs=86.3
Q ss_pred HHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCC
Q 006905 196 AYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLP 270 (626)
Q Consensus 196 ~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lp 270 (626)
.++..+.+.+. ...++.+|||||||+|.++..|++. .++++|+++..+..+.. .+...+..+.+.+.|...++
T Consensus 8 ~~~~~~~~~~~-~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~-~~~~~~~~v~~~~~d~~~~~ 85 (284)
T 3gu3_A 8 DYVSFLVNTVW-KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARE-LFRLLPYDSEFLEGDATEIE 85 (284)
T ss_dssp HHHHHHHHTTS-CCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHH-HHHSSSSEEEEEESCTTTCC
T ss_pred HHHHHHHHHHh-ccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-HHHhcCCceEEEEcchhhcC
Confidence 44444554442 1223569999999999999999875 57888887754443322 22233446778888888888
Q ss_pred CCCCCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 006905 271 YPSRAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGPP 315 (626)
Q Consensus 271 f~d~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~pp 315 (626)
++ ++||+|++..+++|+. +...++.++.|+|||||++++..+.
T Consensus 86 ~~-~~fD~v~~~~~l~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 86 LN-DKYDIAICHAFLLHMT-TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp CS-SCEEEEEEESCGGGCS-SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cC-CCeeEEEECChhhcCC-CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 84 6999999999997665 4689999999999999999998775
No 56
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.25 E-value=2.8e-11 Score=125.53 Aligned_cols=118 Identities=17% Similarity=0.200 Sum_probs=82.3
Q ss_pred HHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHH-------cCCCeEEEEccc
Q 006905 197 YIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALE-------RGVPALIGVLAA 266 (626)
Q Consensus 197 yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~e-------rg~~~~~~v~d~ 266 (626)
.++.+.+.+.....+..+|||||||+|.++..+++. .++++|+++.++..+..+.... ....+.+.++|.
T Consensus 20 l~~~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~ 99 (313)
T 3bgv_A 20 LIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADS 99 (313)
T ss_dssp HHHHHHHHHHHTC--CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCT
T ss_pred HHHHHHHHhhhccCCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecc
Confidence 334444444333223568999999999999988864 6888998876665544433322 112467788887
Q ss_pred ccCC----CC--CCCeeEEEecccccccccc---HHHHHHHHHhcccCCeEEEEEeC
Q 006905 267 ERLP----YP--SRAFDMAHCSRCLIPWNQF---GGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 267 ~~Lp----f~--d~sFDlV~~~~~l~h~~~~---~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
..++ ++ +++||+|+|+.++++...+ ...+|.++.|+|||||+|+++.+
T Consensus 100 ~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 100 SKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp TTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 7775 54 4589999999988443132 36899999999999999999865
No 57
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.25 E-value=2.5e-11 Score=125.11 Aligned_cols=110 Identities=15% Similarity=0.141 Sum_probs=81.1
Q ss_pred HHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCCC--eEEEEcccccCCCCC
Q 006905 199 DDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGVP--ALIGVLAAERLPYPS 273 (626)
Q Consensus 199 ~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~~--~~~~v~d~~~Lpf~d 273 (626)
+.+.+.+... ++.+|||||||+|.++..|+++ .++++|+++.++..+.. .+...+++ +.+...|...+ +
T Consensus 62 ~~~~~~~~~~--~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~---~ 135 (302)
T 3hem_A 62 KLALDKLNLE--PGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKA-MFDEVDSPRRKEVRIQGWEEF---D 135 (302)
T ss_dssp HHHHHTTCCC--TTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHH-HHHHSCCSSCEEEEECCGGGC---C
T ss_pred HHHHHHcCCC--CcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHHhcCCCCceEEEECCHHHc---C
Confidence 3444444333 3559999999999999999886 57888887755543332 23344543 66777787665 6
Q ss_pred CCeeEEEecccccccccc--------HHHHHHHHHhcccCCeEEEEEeC
Q 006905 274 RAFDMAHCSRCLIPWNQF--------GGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 274 ~sFDlV~~~~~l~h~~~~--------~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
++||+|++..+++|+.+. ...++.++.|+|||||.+++...
T Consensus 136 ~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 136 EPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp CCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred CCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 899999999999887542 26899999999999999999754
No 58
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.25 E-value=4e-11 Score=122.42 Aligned_cols=100 Identities=11% Similarity=0.139 Sum_probs=80.2
Q ss_pred CCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCCCeeEEEecccccccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSRAFDMAHCSRCLIPWN 289 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h~~ 289 (626)
+.+|||+|||+|.++..|+++ .++++|+++..+..+.. .+...+..+.+...|...+++ +++||+|+++.+++|+.
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~~~ 198 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNE-TKEKENLNISTALYDINAANI-QENYDFIVSTVVFMFLN 198 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGGGSC
T ss_pred CCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHH-HHHHcCCceEEEEeccccccc-cCCccEEEEccchhhCC
Confidence 458999999999999999987 57888887755544333 333456678888889888887 78999999999997775
Q ss_pred cc-HHHHHHHHHhcccCCeEEEEEe
Q 006905 290 QF-GGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 290 ~~-~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
.. ...++.++.++|||||++++..
T Consensus 199 ~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 199 RERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp GGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 43 3689999999999999988864
No 59
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.24 E-value=9.9e-12 Score=116.62 Aligned_cols=94 Identities=17% Similarity=0.197 Sum_probs=76.8
Q ss_pred CCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCCCeeEEEecccccccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSRAFDMAHCSRCLIPWN 289 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h~~ 289 (626)
+.+|||+|||+|.++..+++. .++++|+++ .+++.++++...+.+...| +++++++||+|+++.+++|+.
T Consensus 18 ~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~-----~~~~~a~~~~~~v~~~~~d---~~~~~~~~D~v~~~~~l~~~~ 89 (170)
T 3i9f_A 18 KGVIVDYGCGNGFYCKYLLEFATKLYCIDINV-----IALKEVKEKFDSVITLSDP---KEIPDNSVDFILFANSFHDMD 89 (170)
T ss_dssp CEEEEEETCTTCTTHHHHHTTEEEEEEECSCH-----HHHHHHHHHCTTSEEESSG---GGSCTTCEEEEEEESCSTTCS
T ss_pred CCeEEEECCCCCHHHHHHHhhcCeEEEEeCCH-----HHHHHHHHhCCCcEEEeCC---CCCCCCceEEEEEccchhccc
Confidence 458999999999999999987 567776654 5566666655556776655 778889999999999997775
Q ss_pred ccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 290 QFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 290 ~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+...+++++.|+|||||++++...
T Consensus 90 -~~~~~l~~~~~~L~pgG~l~~~~~ 113 (170)
T 3i9f_A 90 -DKQHVISEVKRILKDDGRVIIIDW 113 (170)
T ss_dssp -CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -CHHHHHHHHHHhcCCCCEEEEEEc
Confidence 568999999999999999999864
No 60
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.24 E-value=2.4e-11 Score=119.06 Aligned_cols=100 Identities=25% Similarity=0.332 Sum_probs=78.8
Q ss_pred CCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHc----CC------CeEEEEcccccCCCCCCCeeEE
Q 006905 212 IRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALER----GV------PALIGVLAAERLPYPSRAFDMA 279 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~er----g~------~~~~~v~d~~~Lpf~d~sFDlV 279 (626)
+.+|||+|||+|.++..++++ .++++|+++ .+++.++++ +. .+.+...+...+++++++||+|
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v 105 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELASKGYSVTGIDINS-----EAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFA 105 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEE
T ss_pred CCeEEEECCCCCHHHHHHHhCCCeEEEEECCH-----HHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEE
Confidence 458999999999999999987 566777755 444455442 33 3567788888899989999999
Q ss_pred EeccccccccccH--HHHHHHHHhcccCCeEEEEEeCCC
Q 006905 280 HCSRCLIPWNQFG--GIYLIEVDRVLRPGGYWILSGPPI 316 (626)
Q Consensus 280 ~~~~~l~h~~~~~--~~~L~Ei~RvLKPGG~lvis~pp~ 316 (626)
+++.+++|+.+.. ..+++++.|+|||||++++..+..
T Consensus 106 ~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 106 VMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp EEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred EEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 9999997776432 289999999999999999986533
No 61
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.24 E-value=3.4e-11 Score=117.46 Aligned_cols=97 Identities=18% Similarity=0.226 Sum_probs=77.3
Q ss_pred CCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCCeEEEEccccc--CCCCCCCeeEEEeccccc
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAER--LPYPSRAFDMAHCSRCLI 286 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~--Lpf~d~sFDlV~~~~~l~ 286 (626)
+..+|||+|||+|.++..+++. .++++|+ ++.+++.++++.. .+...|... +++++++||+|+++.+++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~-----~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~v~~~~~l~ 104 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENGTRVSGIEA-----FPEAAEQAKEKLD--HVVLGDIETMDMPYEEEQFDCVIFGDVLE 104 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTTCEEEEEES-----SHHHHHHHHTTSS--EEEESCTTTCCCCSCTTCEEEEEEESCGG
T ss_pred CCCcEEEeCCCCCHHHHHHHhcCCeEEEEeC-----CHHHHHHHHHhCC--cEEEcchhhcCCCCCCCccCEEEECChhh
Confidence 4569999999999999999887 4556665 4456667766543 455667655 678889999999999997
Q ss_pred cccccHHHHHHHHHhcccCCeEEEEEeCC
Q 006905 287 PWNQFGGIYLIEVDRVLRPGGYWILSGPP 315 (626)
Q Consensus 287 h~~~~~~~~L~Ei~RvLKPGG~lvis~pp 315 (626)
|+.+ +..++.++.++|+|||++++..+.
T Consensus 105 ~~~~-~~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 105 HLFD-PWAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp GSSC-HHHHHHHTGGGEEEEEEEEEEEEC
T ss_pred hcCC-HHHHHHHHHHHcCCCCEEEEEeCC
Confidence 7764 589999999999999999998754
No 62
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.23 E-value=5.6e-11 Score=122.93 Aligned_cols=101 Identities=16% Similarity=0.108 Sum_probs=77.7
Q ss_pred CCCEEEEeCCCCchHHHHHh--hC---CcEEEeCCccchHHHHHHHHHHcCCC--eEEEEcccccCCCCCCCeeEEEecc
Q 006905 211 SIRTAIDTGCGVASWGAYLL--SR---NIITMSFAPRDTHEAQVQFALERGVP--ALIGVLAAERLPYPSRAFDMAHCSR 283 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La--~~---~V~avdis~~dls~a~i~~A~erg~~--~~~~v~d~~~Lpf~d~sFDlV~~~~ 283 (626)
++.+|||||||+|.++..|+ .. .++++|+++..+..+.. .+...+.. +.+..+|...++++ ++||+|+++.
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~ 195 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATR-LAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNG 195 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHH-HHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCS
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHH-HHHhcCCCCceEEEECchhcCCcc-CCeEEEEECC
Confidence 35689999999999999985 22 68888887754443322 22233433 77888899899987 8999999999
Q ss_pred ccccccccHH--HHHHHHHhcccCCeEEEEEe
Q 006905 284 CLIPWNQFGG--IYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 284 ~l~h~~~~~~--~~L~Ei~RvLKPGG~lvis~ 313 (626)
+++|+.+... .++.++.|+|||||+|++..
T Consensus 196 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 196 LNIYEPDDARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 9977765432 48999999999999999986
No 63
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.23 E-value=2.9e-11 Score=118.74 Aligned_cols=94 Identities=22% Similarity=0.265 Sum_probs=78.4
Q ss_pred CCEEEEeCCCCchHHHHHhhCCcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCCCeeEEEecccccccccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSRNIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSRAFDMAHCSRCLIPWNQF 291 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h~~~~ 291 (626)
+.+|||||||+|.++..++.+ +++|+++ .+++.++++ .+.+...+...+++++++||+|++..+++|+. +
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~--~~vD~s~-----~~~~~a~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~-~ 117 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK--IGVEPSE-----RMAEIARKR--GVFVLKGTAENLPLKDESFDFALMVTTICFVD-D 117 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC--EEEESCH-----HHHHHHHHT--TCEEEECBTTBCCSCTTCEEEEEEESCGGGSS-C
T ss_pred CCcEEEeCCCCCHHHHHHHHH--hccCCCH-----HHHHHHHhc--CCEEEEcccccCCCCCCCeeEEEEcchHhhcc-C
Confidence 458999999999999999887 7787755 455666666 45677778888898889999999999997764 5
Q ss_pred HHHHHHHHHhcccCCeEEEEEeCC
Q 006905 292 GGIYLIEVDRVLRPGGYWILSGPP 315 (626)
Q Consensus 292 ~~~~L~Ei~RvLKPGG~lvis~pp 315 (626)
+..+|.++.++|+|||.+++..+.
T Consensus 118 ~~~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 118 PERALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCcEEEEEEeC
Confidence 689999999999999999998653
No 64
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.23 E-value=8.8e-12 Score=126.52 Aligned_cols=114 Identities=16% Similarity=0.097 Sum_probs=77.8
Q ss_pred HHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHc-C-------------------
Q 006905 200 DIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALER-G------------------- 256 (626)
Q Consensus 200 ~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~er-g------------------- 256 (626)
.+.+++.....++.+|||||||+|.++..++.. .|+++|+++.++..+......+. +
T Consensus 44 ~~~~~~~~~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~ 123 (263)
T 2a14_A 44 CLHKTFGPGGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGR 123 (263)
T ss_dssp HHHHHHSTTSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGG
T ss_pred HHHHHhcCCCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcc
Confidence 444554333334568999999999887766654 48899998876665433211100 0
Q ss_pred ---------CCeE-EEEccccc-CCCC---CCCeeEEEecccccccc---ccHHHHHHHHHhcccCCeEEEEEe
Q 006905 257 ---------VPAL-IGVLAAER-LPYP---SRAFDMAHCSRCLIPWN---QFGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 257 ---------~~~~-~~v~d~~~-Lpf~---d~sFDlV~~~~~l~h~~---~~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
..+. +.++|... .|++ .++||+|+++.+++|.. ++...+++++.|+|||||+|++++
T Consensus 124 ~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 124 WEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp HHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 0122 56677555 3443 67899999999997653 233689999999999999999986
No 65
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.22 E-value=2.2e-11 Score=117.74 Aligned_cols=98 Identities=22% Similarity=0.261 Sum_probs=77.4
Q ss_pred CCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcC---CCeEEEEcccccCCCCCCCeeEEEecccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERG---VPALIGVLAAERLPYPSRAFDMAHCSRCL 285 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg---~~~~~~v~d~~~Lpf~d~sFDlV~~~~~l 285 (626)
..+|||+|||+|.++..+++. .++++|+++.. ++.++++. ..+.+.+.|...+++++++||+|+++.++
T Consensus 43 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~-----~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~ 117 (215)
T 2pxx_A 43 EDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVV-----VAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTL 117 (215)
T ss_dssp TCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHH-----HHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHH
T ss_pred CCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHH-----HHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcch
Confidence 458999999999999999886 57888886644 44444332 34677788888889888999999998877
Q ss_pred cccc--------------ccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 286 IPWN--------------QFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 286 ~h~~--------------~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
++.. .+...++.++.|+|||||.+++..+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 118 DALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp HHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred hhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 5543 2337899999999999999999865
No 66
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.22 E-value=3.4e-11 Score=118.68 Aligned_cols=97 Identities=13% Similarity=0.153 Sum_probs=76.8
Q ss_pred CCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCCCeeEEEecc-cccc
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSRAFDMAHCSR-CLIP 287 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~sFDlV~~~~-~l~h 287 (626)
+..+|||+|||+|.++..|+++ .++++|+++ .+++.++++...+.+...|...+++ +++||+|+|.. +++|
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~-----~~~~~a~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~ 113 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEFGDTAGLELSE-----DMLTHARKRLPDATLHQGDMRDFRL-GRKFSAVVSMFSSVGY 113 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHHSEEEEEESCH-----HHHHHHHHHCTTCEEEECCTTTCCC-SSCEEEEEECTTGGGG
T ss_pred CCCeEEEecccCCHHHHHHHHhCCcEEEEeCCH-----HHHHHHHHhCCCCEEEECCHHHccc-CCCCcEEEEcCchHhh
Confidence 3568999999999999999886 477777755 4555666665557788888888887 67899999755 7766
Q ss_pred cc--ccHHHHHHHHHhcccCCeEEEEEe
Q 006905 288 WN--QFGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 288 ~~--~~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
.. .+...+|+++.++|||||.+++..
T Consensus 114 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 114 LKTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp CCSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred cCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 64 334789999999999999999974
No 67
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.22 E-value=2.8e-11 Score=117.83 Aligned_cols=105 Identities=19% Similarity=0.183 Sum_probs=77.4
Q ss_pred HHHHhhccCCCCCCEEEEeCCCCchHHHHHhhCC--cEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccC---CCCC-
Q 006905 200 DIGKLINLNDGSIRTAIDTGCGVASWGAYLLSRN--IITMSFAPRDTHEAQVQFALERGVPALIGVLAAERL---PYPS- 273 (626)
Q Consensus 200 ~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~~--V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~L---pf~d- 273 (626)
.+.+.+.... +.+|||||||+|.++..|++.+ ++++|++ +.+++.++++ ....+...+...+ ++..
T Consensus 43 ~~~~~~~~~~--~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s-----~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~ 114 (227)
T 3e8s_A 43 AILLAILGRQ--PERVLDLGCGEGWLLRALADRGIEAVGVDGD-----RTLVDAARAA-GAGEVHLASYAQLAEAKVPVG 114 (227)
T ss_dssp HHHHHHHHTC--CSEEEEETCTTCHHHHHHHTTTCEEEEEESC-----HHHHHHHHHT-CSSCEEECCHHHHHTTCSCCC
T ss_pred HHHHHhhcCC--CCEEEEeCCCCCHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHh-cccccchhhHHhhcccccccC
Confidence 3444443333 3689999999999999999874 5666664 4566677766 3344555565544 5444
Q ss_pred CCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 274 RAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 274 ~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
++||+|+|+.+++ ..+...+++++.++|||||++++..+
T Consensus 115 ~~fD~v~~~~~l~--~~~~~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 115 KDYDLICANFALL--HQDIIELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp CCEEEEEEESCCC--SSCCHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCccEEEECchhh--hhhHHHHHHHHHHHhCCCeEEEEEec
Confidence 4599999999995 55568999999999999999999875
No 68
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.22 E-value=2.3e-11 Score=126.72 Aligned_cols=102 Identities=5% Similarity=-0.028 Sum_probs=72.8
Q ss_pred CCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCCC-------eEEEEccc------ccC--CCCC
Q 006905 212 IRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGVP-------ALIGVLAA------ERL--PYPS 273 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~~-------~~~~v~d~------~~L--pf~d 273 (626)
+.+|||||||+|..+..++.. .|+++|+++.++..+..+.. +.+.. +.+.+.+. ..+ ++++
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~-~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYN-KLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHH-HHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHH-hccccccccccccchhhhhcccchhhhhhhccccC
Confidence 568999999999765555443 58999998877766554433 33322 34555554 323 4667
Q ss_pred CCeeEEEecccccccc--ccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 274 RAFDMAHCSRCLIPWN--QFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 274 ~sFDlV~~~~~l~h~~--~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
++||+|+|..++|+.. .+...+|+++.|+|||||+|+++.+
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 8999999999885432 2347899999999999999999865
No 69
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.22 E-value=5e-11 Score=116.25 Aligned_cols=85 Identities=21% Similarity=0.281 Sum_probs=72.5
Q ss_pred CCEEEEeCCCCchHHHHHhhCCcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCCCeeEEEecccccccccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSRNIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSRAFDMAHCSRCLIPWNQF 291 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h~~~~ 291 (626)
..+|||||||+|.++..++ ..++++|+++. .+.+..+|...+|+++++||+|+++.++ |+ .+
T Consensus 68 ~~~vLDiG~G~G~~~~~l~-~~v~~~D~s~~---------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l-~~-~~ 129 (215)
T 2zfu_A 68 SLVVADFGCGDCRLASSIR-NPVHCFDLASL---------------DPRVTVCDMAQVPLEDESVDVAVFCLSL-MG-TN 129 (215)
T ss_dssp TSCEEEETCTTCHHHHHCC-SCEEEEESSCS---------------STTEEESCTTSCSCCTTCEEEEEEESCC-CS-SC
T ss_pred CCeEEEECCcCCHHHHHhh-ccEEEEeCCCC---------------CceEEEeccccCCCCCCCEeEEEEehhc-cc-cC
Confidence 4589999999999998885 68999999884 2345667888889989999999999999 44 55
Q ss_pred HHHHHHHHHhcccCCeEEEEEeC
Q 006905 292 GGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 292 ~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
...+|.++.++|+|||++++...
T Consensus 130 ~~~~l~~~~~~L~~gG~l~i~~~ 152 (215)
T 2zfu_A 130 IRDFLEEANRVLKPGGLLKVAEV 152 (215)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHHhCCCCeEEEEEEc
Confidence 78999999999999999999864
No 70
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.22 E-value=4.4e-11 Score=115.36 Aligned_cols=99 Identities=18% Similarity=0.192 Sum_probs=76.4
Q ss_pred EEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCCCeeEEEecccccccc-c
Q 006905 214 TAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSRAFDMAHCSRCLIPWN-Q 290 (626)
Q Consensus 214 ~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h~~-~ 290 (626)
+|||||||+|.++..|++. .++++|+++.++..+... ....+..+.+...|...+++++++||+|+++.. |+. .
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~--~~~~~ 108 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQL-AQEKGVKITTVQSNLADFDIVADAWEGIVSIFC--HLPSS 108 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHH-HHHHTCCEEEECCBTTTBSCCTTTCSEEEEECC--CCCHH
T ss_pred CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHH-HHhcCCceEEEEcChhhcCCCcCCccEEEEEhh--cCCHH
Confidence 8999999999999999987 567777766544433322 223355777888888888888899999999653 443 3
Q ss_pred cHHHHHHHHHhcccCCeEEEEEeCC
Q 006905 291 FGGIYLIEVDRVLRPGGYWILSGPP 315 (626)
Q Consensus 291 ~~~~~L~Ei~RvLKPGG~lvis~pp 315 (626)
+...++.++.++|||||++++..+.
T Consensus 109 ~~~~~l~~~~~~L~pgG~l~~~~~~ 133 (202)
T 2kw5_A 109 LRQQLYPKVYQGLKPGGVFILEGFA 133 (202)
T ss_dssp HHHHHHHHHHTTCCSSEEEEEEEEC
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEec
Confidence 4478999999999999999998753
No 71
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.21 E-value=1.4e-11 Score=123.43 Aligned_cols=113 Identities=13% Similarity=0.066 Sum_probs=78.0
Q ss_pred HHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCCCeEEEEccccc--C
Q 006905 195 DAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAER--L 269 (626)
Q Consensus 195 ~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~--L 269 (626)
..+.+.+.+.+. ..+.+|||||||+|..+.++++. .++++|+++.++..+ .+.+...+....+..++.+. .
T Consensus 47 ~~~m~~~a~~~~---~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a-~~~~~~~~~~~~~~~~~a~~~~~ 122 (236)
T 3orh_A 47 TPYMHALAAAAS---SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRL-RDWAPRQTHKVIPLKGLWEDVAP 122 (236)
T ss_dssp HHHHHHHHHHHT---TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHH-HHHGGGCSSEEEEEESCHHHHGG
T ss_pred HHHHHHHHHhhc---cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHH-HHHHhhCCCceEEEeehHHhhcc
Confidence 345555666553 23568999999999999999886 577888876444322 22333345556666666543 3
Q ss_pred CCCCCCeeEEEe-----ccccccccccHHHHHHHHHhcccCCeEEEEE
Q 006905 270 PYPSRAFDMAHC-----SRCLIPWNQFGGIYLIEVDRVLRPGGYWILS 312 (626)
Q Consensus 270 pf~d~sFDlV~~-----~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis 312 (626)
++++++||.|++ ...+.|.. +...++.++.|+|||||.|++.
T Consensus 123 ~~~~~~FD~i~~D~~~~~~~~~~~~-~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 123 TLPDGHFDGILYDTYPLSEETWHTH-QFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp GSCTTCEEEEEECCCCCBGGGTTTH-HHHHHHHTHHHHEEEEEEEEEC
T ss_pred cccccCCceEEEeeeecccchhhhc-chhhhhhhhhheeCCCCEEEEE
Confidence 578899999985 33333433 3478999999999999999884
No 72
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.21 E-value=3.7e-11 Score=124.65 Aligned_cols=100 Identities=11% Similarity=0.140 Sum_probs=76.4
Q ss_pred CCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccccCCCCCCCeeEEEecccc
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAERLPYPSRAFDMAHCSRCL 285 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~Lpf~d~sFDlV~~~~~l 285 (626)
++.+|||||||+|.++..+++. .++++|+++.++..+.. .....++ .+.+...|...+| ++||+|++..++
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~~l 165 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQ-VLASIDTNRSRQVLLQGWEDFA---EPVDRIVSIEAF 165 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHH-HHHTSCCSSCEEEEESCGGGCC---CCCSEEEEESCG
T ss_pred CcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHH-HHHhcCCCCceEEEECChHHCC---CCcCEEEEeChH
Confidence 3569999999999999999876 57777776644433322 2223343 3677777877775 789999999999
Q ss_pred cccc-ccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 286 IPWN-QFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 286 ~h~~-~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+|+. .+...+|.++.|+|||||.+++..+
T Consensus 166 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 166 EHFGHENYDDFFKRCFNIMPADGRMTVQSS 195 (318)
T ss_dssp GGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred HhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 8875 3558999999999999999999864
No 73
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.21 E-value=2.9e-11 Score=129.62 Aligned_cols=102 Identities=20% Similarity=0.146 Sum_probs=79.5
Q ss_pred CCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHc----C----CCeEEEEcccccC------CCC
Q 006905 212 IRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALER----G----VPALIGVLAAERL------PYP 272 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~er----g----~~~~~~v~d~~~L------pf~ 272 (626)
+.+|||||||+|.++..|++. .++++|+++.++..+..+..... | ..+.+..+|...+ +++
T Consensus 84 ~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~~ 163 (383)
T 4fsd_A 84 GATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGVP 163 (383)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCCC
T ss_pred CCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCCC
Confidence 568999999999999888774 58888887754443332222110 3 4678888888776 899
Q ss_pred CCCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 273 SRAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 273 d~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+++||+|+++.+++|+. +...+|+++.|+|||||+|+++..
T Consensus 164 ~~~fD~V~~~~~l~~~~-d~~~~l~~~~r~LkpgG~l~i~~~ 204 (383)
T 4fsd_A 164 DSSVDIVISNCVCNLST-NKLALFKEIHRVLRDGGELYFSDV 204 (383)
T ss_dssp TTCEEEEEEESCGGGCS-CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCEEEEEEccchhcCC-CHHHHHHHHHHHcCCCCEEEEEEe
Confidence 99999999999996654 478999999999999999999753
No 74
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.20 E-value=2.6e-11 Score=120.52 Aligned_cols=114 Identities=13% Similarity=0.091 Sum_probs=79.6
Q ss_pred HHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccC--
Q 006905 195 DAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERL-- 269 (626)
Q Consensus 195 ~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~L-- 269 (626)
..+++.+...+. ..+.+|||||||+|.++..|++. .++++|+++.++..+.. .+...+..+.+..+|...+
T Consensus 47 ~~~~~~l~~~~~---~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~-~~~~~~~~v~~~~~d~~~~~~ 122 (236)
T 1zx0_A 47 TPYMHALAAAAS---SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRD-WAPRQTHKVIPLKGLWEDVAP 122 (236)
T ss_dssp HHHHHHHHHHHT---TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHH-HGGGCSSEEEEEESCHHHHGG
T ss_pred HHHHHHHHhhcC---CCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHH-HHHhcCCCeEEEecCHHHhhc
Confidence 445555555442 23558999999999999999875 57788886654433222 2222345577778887777
Q ss_pred CCCCCCeeEEEe-ccccccccc----cHHHHHHHHHhcccCCeEEEEEe
Q 006905 270 PYPSRAFDMAHC-SRCLIPWNQ----FGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 270 pf~d~sFDlV~~-~~~l~h~~~----~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
++++++||+|++ .+.+ +... ....++.++.|+|||||+|++..
T Consensus 123 ~~~~~~fD~V~~d~~~~-~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 123 TLPDGHFDGILYDTYPL-SEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp GSCTTCEEEEEECCCCC-BGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred ccCCCceEEEEECCccc-chhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 888999999999 5553 2211 12477999999999999999863
No 75
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.20 E-value=6.9e-11 Score=127.08 Aligned_cols=119 Identities=13% Similarity=0.111 Sum_probs=87.2
Q ss_pred HHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCC
Q 006905 196 AYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPS 273 (626)
Q Consensus 196 ~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d 273 (626)
..++.+.+.+.....++.+|||+|||+|.++..++++ .|+++|+++..+..+.. .+...++.+.+...|....+.++
T Consensus 218 ~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~-n~~~~~~~v~~~~~D~~~~~~~~ 296 (381)
T 3dmg_A 218 LLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQK-GLEANALKAQALHSDVDEALTEE 296 (381)
T ss_dssp HHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHH-HHHHTTCCCEEEECSTTTTSCTT
T ss_pred HHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHH-HHHHcCCCeEEEEcchhhccccC
Confidence 3444444443212234568999999999999999987 57888887755544333 33345667888888888887777
Q ss_pred CCeeEEEeccccccc----cccHHHHHHHHHhcccCCeEEEEEeCC
Q 006905 274 RAFDMAHCSRCLIPW----NQFGGIYLIEVDRVLRPGGYWILSGPP 315 (626)
Q Consensus 274 ~sFDlV~~~~~l~h~----~~~~~~~L~Ei~RvLKPGG~lvis~pp 315 (626)
++||+|+|+..+++. ......++.++.++|||||.++++..+
T Consensus 297 ~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 297 ARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp CCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred CCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 899999999888541 233478999999999999999998753
No 76
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.20 E-value=5.6e-11 Score=112.70 Aligned_cols=98 Identities=17% Similarity=0.201 Sum_probs=77.5
Q ss_pred CCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCCCeeEEEec-cccccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSRAFDMAHCS-RCLIPW 288 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~sFDlV~~~-~~l~h~ 288 (626)
..+|||+|||+|.++..+++. .++++|+++ .+++.++++...+.+...|...+++++++||+|+++ .++++.
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~-----~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~ 121 (195)
T 3cgg_A 47 GAKILDAGCGQGRIGGYLSKQGHDVLGTDLDP-----ILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFL 121 (195)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGS
T ss_pred CCeEEEECCCCCHHHHHHHHCCCcEEEEcCCH-----HHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhc
Confidence 558999999999999999887 456666644 566666666555778888888888888899999998 566554
Q ss_pred cc-cHHHHHHHHHhcccCCeEEEEEeC
Q 006905 289 NQ-FGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 289 ~~-~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
.. +...++.++.++|+|||.+++..+
T Consensus 122 ~~~~~~~~l~~~~~~l~~~G~l~~~~~ 148 (195)
T 3cgg_A 122 AEDGREPALANIHRALGADGRAVIGFG 148 (195)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ChHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 32 237899999999999999999864
No 77
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.20 E-value=4.7e-11 Score=115.25 Aligned_cols=134 Identities=13% Similarity=0.084 Sum_probs=103.4
Q ss_pred eeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc-cceeccccccCCCCC-CccceeeeccccccCCCC
Q 006905 471 RNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL-VGTYTNWCEAMSTYP-RTYDLIHADSVFSLYKDR 548 (626)
Q Consensus 471 r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl-i~~~~~~~e~~~~yp-~t~Dlih~~~~f~~~~~~ 548 (626)
.+|||+|||.|.++..|++.+. +|+.+|.++.+++.+.++.- +..+..-.+.+. ++ ++||+|.+..+|.+...
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~~~~- 117 (203)
T 3h2b_A 43 GVILDVGSGTGRWTGHLASLGH---QIEGLEPATRLVELARQTHPSVTFHHGTITDLS-DSPKRWAGLLAWYSLIHMGP- 117 (203)
T ss_dssp SCEEEETCTTCHHHHHHHHTTC---CEEEECCCHHHHHHHHHHCTTSEEECCCGGGGG-GSCCCEEEEEEESSSTTCCT-
T ss_pred CeEEEecCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHhCCCCeEEeCcccccc-cCCCCeEEEEehhhHhcCCH-
Confidence 4699999999999999999876 78999999999999998842 233332122232 33 89999999999998763
Q ss_pred CCHHHHHHHhhhhccCCcEEEEEcCh----------------HHHHHHHHHHHhCCCeeEEeecCCCCCCcceEEEEEe
Q 006905 549 CETEDILLEMDRILRPEGGVIFRDDV----------------DELVKVKRIIDALKWQSQIVDHEDGPLEREKLLFAVK 611 (626)
Q Consensus 549 c~~~~~l~E~dRiLRPgG~~i~~d~~----------------~~~~~~~~~~~~l~w~~~~~~~e~~~~~~e~~l~~~K 611 (626)
-+...+|.++.|+|||||.+++.+.. -....+++++....|++.......+ .+...|...|
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~--~p~~~l~~~~ 194 (203)
T 3h2b_A 118 GELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDPR--FPHAYLTAEA 194 (203)
T ss_dssp TTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTT--SSEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCC--Ccchhhhhhh
Confidence 37789999999999999999998522 1368899999999999886665544 4555555554
No 78
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.20 E-value=3.8e-11 Score=123.65 Aligned_cols=113 Identities=12% Similarity=0.054 Sum_probs=82.6
Q ss_pred HHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcC----CCeEEEEcccccCC
Q 006905 197 YIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERG----VPALIGVLAAERLP 270 (626)
Q Consensus 197 yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg----~~~~~~v~d~~~Lp 270 (626)
....+.+.+... ..+|||||||+|.++..|+++ .++++|+++.++..+..+ +...+ ..+.+.++|...++
T Consensus 71 ~~~~~~~~~~~~---~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~~~~~v~~~~~d~~~~~ 146 (299)
T 3g2m_A 71 EAREFATRTGPV---SGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKR-LAEAPADVRDRCTLVQGDMSAFA 146 (299)
T ss_dssp HHHHHHHHHCCC---CSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHH-HHTSCHHHHTTEEEEECBTTBCC
T ss_pred HHHHHHHhhCCC---CCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHH-HhhcccccccceEEEeCchhcCC
Confidence 344455555322 237999999999999999987 688888877555433322 22223 45788889988888
Q ss_pred CCCCCeeEEEecccccccccc--HHHHHHHHHhcccCCeEEEEEeC
Q 006905 271 YPSRAFDMAHCSRCLIPWNQF--GGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 271 f~d~sFDlV~~~~~l~h~~~~--~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+ +++||+|+|...+.|+.+. ...+|+++.|+|||||+|++..+
T Consensus 147 ~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 191 (299)
T 3g2m_A 147 L-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLA 191 (299)
T ss_dssp C-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred c-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEee
Confidence 7 6899999986554455542 37899999999999999999864
No 79
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.19 E-value=1.3e-10 Score=116.00 Aligned_cols=114 Identities=18% Similarity=0.236 Sum_probs=81.7
Q ss_pred HHHHHhhcc-CCCCCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCCC
Q 006905 199 DDIGKLINL-NDGSIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSRA 275 (626)
Q Consensus 199 ~~L~~ll~l-~~~~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~s 275 (626)
+.+.+++.. ...++.+|||+|||+|.++..|+++ .++++|+++.++..+..+ +...+..+.+..+|...++++ ++
T Consensus 28 ~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~-~~~~~~~v~~~~~d~~~~~~~-~~ 105 (252)
T 1wzn_A 28 DFVEEIFKEDAKREVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRK-AKERNLKIEFLQGDVLEIAFK-NE 105 (252)
T ss_dssp HHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHTTCCCEEEESCGGGCCCC-SC
T ss_pred HHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHH-HHhcCCceEEEECChhhcccC-CC
Confidence 334444442 2233568999999999999999887 577888877555543332 334456778888888888865 68
Q ss_pred eeEEEecccccccc--ccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 276 FDMAHCSRCLIPWN--QFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 276 FDlV~~~~~l~h~~--~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
||+|+|..+.+++. .+...+|.++.++|||||.+++..+
T Consensus 106 fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 106 FDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp EEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 99999875443332 2347899999999999999998754
No 80
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.19 E-value=3.1e-11 Score=117.79 Aligned_cols=132 Identities=15% Similarity=0.214 Sum_probs=98.2
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc--cceeccccccCCCCC--CccceeeeccccccC
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL--VGTYTNWCEAMSTYP--RTYDLIHADSVFSLY 545 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl--i~~~~~~~e~~~~yp--~t~Dlih~~~~f~~~ 545 (626)
-.+|||+|||.|.++..|++.+. +|+.+|.++.+++.+.++.- +..+. ..+..+| .+||+|.+..+|.+.
T Consensus 46 ~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~---~d~~~~~~~~~fD~v~~~~~l~~~ 119 (220)
T 3hnr_A 46 FGNVLEFGVGTGNLTNKLLLAGR---TVYGIEPSREMRMIAKEKLPKEFSITE---GDFLSFEVPTSIDTIVSTYAFHHL 119 (220)
T ss_dssp CSEEEEECCTTSHHHHHHHHTTC---EEEEECSCHHHHHHHHHHSCTTCCEES---CCSSSCCCCSCCSEEEEESCGGGS
T ss_pred CCeEEEeCCCCCHHHHHHHhCCC---eEEEEeCCHHHHHHHHHhCCCceEEEe---CChhhcCCCCCeEEEEECcchhcC
Confidence 56899999999999999999875 89999999999999988843 33333 3333333 899999999999988
Q ss_pred CCCCCHHHHHHHhhhhccCCcEEEEEcCh----H---------------------------HHHHHHHHHHhCCCeeEEe
Q 006905 546 KDRCETEDILLEMDRILRPEGGVIFRDDV----D---------------------------ELVKVKRIIDALKWQSQIV 594 (626)
Q Consensus 546 ~~~c~~~~~l~E~dRiLRPgG~~i~~d~~----~---------------------------~~~~~~~~~~~l~w~~~~~ 594 (626)
.+. ....+|.|+.|+|||||.+++.+.. . ....++++++.-.+++...
T Consensus 120 ~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~ 198 (220)
T 3hnr_A 120 TDD-EKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFT 198 (220)
T ss_dssp CHH-HHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEE
T ss_pred ChH-HHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEe
Confidence 743 1233999999999999999998531 1 1366778888888876654
Q ss_pred ecCCCCCCcceEEEEEec
Q 006905 595 DHEDGPLEREKLLFAVKL 612 (626)
Q Consensus 595 ~~e~~~~~~e~~l~~~K~ 612 (626)
... .-.-++.++|+
T Consensus 199 ~~~----~~~w~~~~~~~ 212 (220)
T 3hnr_A 199 RLN----HFVWVMEATKQ 212 (220)
T ss_dssp ECS----SSEEEEEEEEC
T ss_pred ecc----ceEEEEeehhh
Confidence 433 23446666654
No 81
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.18 E-value=1.4e-11 Score=127.13 Aligned_cols=103 Identities=17% Similarity=0.156 Sum_probs=73.4
Q ss_pred CCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcC------------------------------
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERG------------------------------ 256 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg------------------------------ 256 (626)
.+.+|||||||+|.++..|+++ .++++|+++.++..+...... .+
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRH-YLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHh-hhhhhccccccccccccccccccccccccccc
Confidence 3569999999999999998886 678888876544433322111 00
Q ss_pred -----------------------------CCeEEEEcccccCC-----CCCCCeeEEEecccccccc---c--cHHHHHH
Q 006905 257 -----------------------------VPALIGVLAAERLP-----YPSRAFDMAHCSRCLIPWN---Q--FGGIYLI 297 (626)
Q Consensus 257 -----------------------------~~~~~~v~d~~~Lp-----f~d~sFDlV~~~~~l~h~~---~--~~~~~L~ 297 (626)
..+.+..+|....+ +.+++||+|+|..++++++ . ....+|+
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 13666666654433 5678999999999884443 1 3378999
Q ss_pred HHHhcccCCeEEEEEeC
Q 006905 298 EVDRVLRPGGYWILSGP 314 (626)
Q Consensus 298 Ei~RvLKPGG~lvis~p 314 (626)
++.++|||||+|++...
T Consensus 205 ~~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 205 RIYRHLRPGGILVLEPQ 221 (292)
T ss_dssp HHHHHEEEEEEEEEECC
T ss_pred HHHHHhCCCcEEEEecC
Confidence 99999999999999854
No 82
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.17 E-value=8.8e-11 Score=113.81 Aligned_cols=118 Identities=15% Similarity=0.040 Sum_probs=80.9
Q ss_pred CCCCcHHHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCCC-eEEEEc
Q 006905 189 MFPNGADAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGVP-ALIGVL 264 (626)
Q Consensus 189 ~F~~ga~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~~-~~~~v~ 264 (626)
.|..+.......+.+.+.....++.+|||+|||+|.++..|++. .++++|+++.++..+.. .+...+.. +.+...
T Consensus 38 ~f~~~~~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~v~~~~~ 116 (205)
T 3grz_A 38 AFGTGNHQTTQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEE-NAALNGIYDIALQKT 116 (205)
T ss_dssp ----CCHHHHHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHH-HHHHTTCCCCEEEES
T ss_pred ccCCCCCccHHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHH-HHHHcCCCceEEEec
Confidence 34455555555555555422223568999999999999998886 57888887755544333 23334554 677776
Q ss_pred ccccCCCCCCCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEe
Q 006905 265 AAERLPYPSRAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 265 d~~~Lpf~d~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
|... +.+++||+|+++..+++ ...++.++.++|||||+++++.
T Consensus 117 d~~~--~~~~~fD~i~~~~~~~~----~~~~l~~~~~~L~~gG~l~~~~ 159 (205)
T 3grz_A 117 SLLA--DVDGKFDLIVANILAEI----LLDLIPQLDSHLNEDGQVIFSG 159 (205)
T ss_dssp STTT--TCCSCEEEEEEESCHHH----HHHHGGGSGGGEEEEEEEEEEE
T ss_pred cccc--cCCCCceEEEECCcHHH----HHHHHHHHHHhcCCCCEEEEEe
Confidence 7644 34689999999887633 3678999999999999999974
No 83
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.17 E-value=8.4e-11 Score=118.39 Aligned_cols=134 Identities=14% Similarity=0.099 Sum_probs=104.2
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc-cceeccccccCCCC--CCccceeeecc-ccccC
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL-VGTYTNWCEAMSTY--PRTYDLIHADS-VFSLY 545 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl-i~~~~~~~e~~~~y--p~t~Dlih~~~-~f~~~ 545 (626)
-.+|||+|||.|.++..|++.+. +|+.+|.++.+++.+.++.- +..+. ..+..+ +.+||+|.|.. +|.+.
T Consensus 51 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~---~d~~~~~~~~~fD~v~~~~~~l~~~ 124 (263)
T 3pfg_A 51 AASLLDVACGTGMHLRHLADSFG---TVEGLELSADMLAIARRRNPDAVLHH---GDMRDFSLGRRFSAVTCMFSSIGHL 124 (263)
T ss_dssp CCEEEEETCTTSHHHHHHTTTSS---EEEEEESCHHHHHHHHHHCTTSEEEE---CCTTTCCCSCCEEEEEECTTGGGGS
T ss_pred CCcEEEeCCcCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhCCCCEEEE---CChHHCCccCCcCEEEEcCchhhhc
Confidence 46799999999999999999875 78999999999999998843 23333 233333 59999999998 99988
Q ss_pred CCCCCHHHHHHHhhhhccCCcEEEEEcC----------------------------------------------------
Q 006905 546 KDRCETEDILLEMDRILRPEGGVIFRDD---------------------------------------------------- 573 (626)
Q Consensus 546 ~~~c~~~~~l~E~dRiLRPgG~~i~~d~---------------------------------------------------- 573 (626)
.+.-++..+|.++.|+|||||.++|.+-
T Consensus 125 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (263)
T 3pfg_A 125 AGQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAGPDRGIT 204 (263)
T ss_dssp CHHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEecCCCcEE
Confidence 6544667899999999999999999520
Q ss_pred ---------hHHHHHHHHHHHhCCCeeEEeecCCCCCCcceEEEEEec
Q 006905 574 ---------VDELVKVKRIIDALKWQSQIVDHEDGPLEREKLLFAVKL 612 (626)
Q Consensus 574 ---------~~~~~~~~~~~~~l~w~~~~~~~e~~~~~~e~~l~~~K~ 612 (626)
.-....++++++.--+++..+... .....+.+++|+
T Consensus 205 ~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~---~~~~~~~va~K~ 249 (263)
T 3pfg_A 205 HHEESHRITLFTREQYERAFTAAGLSVEFMPGG---PSGRGLFTGLPG 249 (263)
T ss_dssp EEEEEEEEECCCHHHHHHHHHHTTEEEEEESST---TTSSCEEEEEEC
T ss_pred EEEEEEEEEeecHHHHHHHHHHCCCEEEEeeCC---CCCceeEEEecC
Confidence 002688999999999987755332 234678999996
No 84
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.17 E-value=3.8e-11 Score=114.83 Aligned_cols=119 Identities=15% Similarity=0.188 Sum_probs=88.7
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc--cceeccccccCCCCCCccceeeeccccc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL--VGTYTNWCEAMSTYPRTYDLIHADSVFS 543 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl--i~~~~~~~e~~~~yp~t~Dlih~~~~f~ 543 (626)
-.+|||+|||.|.++..|++.+. +|+.+|.++.+++.+.++ |+ +...+.-.+.+.. +.+||+|.+..+|.
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~ 108 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAANGY---DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVVLM 108 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESCGG
T ss_pred CCeEEEEcCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcchhh
Confidence 35899999999999999998875 899999998999887764 32 2333311122222 68999999999998
Q ss_pred cCCCCCCHHHHHHHhhhhccCCcEEEEEcCh--------------HHHHHHHHHHHhCCCeeEEee
Q 006905 544 LYKDRCETEDILLEMDRILRPEGGVIFRDDV--------------DELVKVKRIIDALKWQSQIVD 595 (626)
Q Consensus 544 ~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~--------------~~~~~~~~~~~~l~w~~~~~~ 595 (626)
+... -+...+|.++.|+|||||++++.+.. -....++++++. |++....
T Consensus 109 ~~~~-~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~~~ 171 (199)
T 2xvm_A 109 FLEA-KTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVKYN 171 (199)
T ss_dssp GSCG-GGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEEEE
T ss_pred hCCH-HHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEEec
Confidence 8753 36688999999999999998875421 134567777776 8876543
No 85
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.17 E-value=6.2e-11 Score=120.76 Aligned_cols=103 Identities=19% Similarity=0.231 Sum_probs=78.2
Q ss_pred CCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccccCCC-CCCCeeEEEeccc
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAERLPY-PSRAFDMAHCSRC 284 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~Lpf-~d~sFDlV~~~~~ 284 (626)
++.+|||||||+|.++..+++. .++++|+++.++..+..+ ....+. .+.+..+|...+++ ++++||+|+|..+
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 142 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVR-ARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFS 142 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHH-HHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESC
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHH-HHhcCCCccEEEEECCccccccCCCCCcCEEEECch
Confidence 3568999999999988888775 578888877555433322 222333 36777888888888 6889999999999
Q ss_pred cccc---cccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 285 LIPW---NQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 285 l~h~---~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
++|. ..+...+|.++.|+|||||++++..+
T Consensus 143 l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 143 FHYAFSTSESLDIAQRNIARHLRPGGYFIMTVP 175 (298)
T ss_dssp GGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 8552 23347899999999999999999864
No 86
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.16 E-value=1.2e-10 Score=115.07 Aligned_cols=113 Identities=16% Similarity=0.145 Sum_probs=83.6
Q ss_pred HHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC-CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCC
Q 006905 196 AYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR-NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSR 274 (626)
Q Consensus 196 ~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~-~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~ 274 (626)
.+.+.+.+.++ . ..+|||+|||+|.++..+++. .++++|+++.++..+..+ +...+..+.+...|...++++ +
T Consensus 22 ~~~~~~~~~~~--~--~~~vLdiG~G~G~~~~~l~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~d~~~~~~~-~ 95 (243)
T 3d2l_A 22 EWVAWVLEQVE--P--GKRIADIGCGTGTATLLLADHYEVTGVDLSEEMLEIAQEK-AMETNRHVDFWVQDMRELELP-E 95 (243)
T ss_dssp HHHHHHHHHSC--T--TCEEEEESCTTCHHHHHHTTTSEEEEEESCHHHHHHHHHH-HHHTTCCCEEEECCGGGCCCS-S
T ss_pred HHHHHHHHHcC--C--CCeEEEecCCCCHHHHHHhhCCeEEEEECCHHHHHHHHHh-hhhcCCceEEEEcChhhcCCC-C
Confidence 34444554442 2 358999999999999999886 678888877555543332 223445677888888888876 7
Q ss_pred CeeEEEecc-cccccc--ccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 275 AFDMAHCSR-CLIPWN--QFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 275 sFDlV~~~~-~l~h~~--~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+||+|++.. +++|+. .+...+++++.++|||||.+++..+
T Consensus 96 ~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 96 PVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp CEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcC
Confidence 899999986 786663 2347899999999999999999754
No 87
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.16 E-value=1.3e-10 Score=118.70 Aligned_cols=109 Identities=12% Similarity=-0.026 Sum_probs=76.0
Q ss_pred HHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCC---
Q 006905 197 YIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPY--- 271 (626)
Q Consensus 197 yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf--- 271 (626)
.++.+.+.+...+ +.+|||||||+|.++..|+++ .|+++|+++ .+++.++++.... ....+...++.
T Consensus 33 ~~~~il~~l~l~~--g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~-----~ml~~Ar~~~~~~-~v~~~~~~~~~~~~ 104 (261)
T 3iv6_A 33 DRENDIFLENIVP--GSTVAVIGASTRFLIEKALERGASVTVFDFSQ-----RMCDDLAEALADR-CVTIDLLDITAEIP 104 (261)
T ss_dssp HHHHHHHTTTCCT--TCEEEEECTTCHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHTSSS-CCEEEECCTTSCCC
T ss_pred HHHHHHHhcCCCC--cCEEEEEeCcchHHHHHHHhcCCEEEEEECCH-----HHHHHHHHHHHhc-cceeeeeecccccc
Confidence 3444555554443 459999999999999999987 567777655 4555555543221 12223333332
Q ss_pred --CCCCeeEEEecccccccccc-HHHHHHHHHhcccCCeEEEEEeC
Q 006905 272 --PSRAFDMAHCSRCLIPWNQF-GGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 272 --~d~sFDlV~~~~~l~h~~~~-~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
.+++||+|+++.+++|+... ...++.++.++| |||.++++.+
T Consensus 105 ~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 105 KELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp GGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred cccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 25789999999999887643 367999999999 9999999864
No 88
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.15 E-value=5e-11 Score=122.11 Aligned_cols=116 Identities=20% Similarity=0.212 Sum_probs=76.5
Q ss_pred HHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhh---CCcEEEeCCccchHHHHHHHHH----------------HcCC-
Q 006905 198 IDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLS---RNIITMSFAPRDTHEAQVQFAL----------------ERGV- 257 (626)
Q Consensus 198 i~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~---~~V~avdis~~dls~a~i~~A~----------------erg~- 257 (626)
+..+.+.+......+.+|||||||+|.+...++. ..|+++|+++.++..+...... ..+.
T Consensus 58 ~~~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~ 137 (289)
T 2g72_A 58 LRCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKG 137 (289)
T ss_dssp HHHHHHHHHTSCSCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSC
T ss_pred HHHHHHHhCCCCCCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcc
Confidence 4455555543323456999999999985544433 2688898877655543321110 0110
Q ss_pred -------------CeEEEEccccc-CCC-----CCCCeeEEEecccccccc---ccHHHHHHHHHhcccCCeEEEEEe
Q 006905 258 -------------PALIGVLAAER-LPY-----PSRAFDMAHCSRCLIPWN---QFGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 258 -------------~~~~~v~d~~~-Lpf-----~d~sFDlV~~~~~l~h~~---~~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
...+..+|+.. +|+ ++++||+|+|+.++++.. .+...+|+++.|+|||||+|++..
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 138 ECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp CCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 02344557665 664 356799999999996643 345899999999999999999974
No 89
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.14 E-value=2.7e-10 Score=111.32 Aligned_cols=138 Identities=7% Similarity=0.102 Sum_probs=100.0
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhc-----------ccceeccccccCCCCC---Cccce
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERG-----------LVGTYTNWCEAMSTYP---RTYDL 535 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rg-----------li~~~~~~~e~~~~yp---~t~Dl 535 (626)
-.+|||+|||.|.++..|++.+ ...+|+.+|.++.+++.+.++- -+.++. ..+...| ++||+
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~---~d~~~~~~~~~~fD~ 105 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQ---SSLVYRDKRFSGYDA 105 (219)
T ss_dssp CCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEE---CCSSSCCGGGTTCSE
T ss_pred CCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEe---CcccccccccCCCCE
Confidence 4589999999999999999874 1137899999999999998873 123333 2333333 79999
Q ss_pred eeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcChH----------------------HHHHHH----HHHHhCCC
Q 006905 536 IHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDVD----------------------ELVKVK----RIIDALKW 589 (626)
Q Consensus 536 ih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~~----------------------~~~~~~----~~~~~l~w 589 (626)
|.|..++.+..+. ++..+|.++.|+|||||.+++....+ ....++ .++.+-.+
T Consensus 106 V~~~~~l~~~~~~-~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf 184 (219)
T 3jwg_A 106 ATVIEVIEHLDEN-RLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGY 184 (219)
T ss_dssp EEEESCGGGCCHH-HHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTE
T ss_pred EEEHHHHHhCCHH-HHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCc
Confidence 9999999988532 34689999999999999888764321 123344 77888888
Q ss_pred eeEEeecCC---CCCCcceEEEEEec
Q 006905 590 QSQIVDHED---GPLEREKLLFAVKL 612 (626)
Q Consensus 590 ~~~~~~~e~---~~~~~e~~l~~~K~ 612 (626)
++....--+ .-..+.+|.|++|.
T Consensus 185 ~v~~~~~g~~~~~~g~~~qi~~~~~~ 210 (219)
T 3jwg_A 185 SVRFLQIGEIDDEFGSPTQMGVFTLG 210 (219)
T ss_dssp EEEEEEESCCCTTSCCSEEEEEEEEC
T ss_pred EEEEEecCCccccCCCCeEEEEEecc
Confidence 887653222 22257899999995
No 90
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.14 E-value=1.4e-10 Score=113.55 Aligned_cols=105 Identities=18% Similarity=0.132 Sum_probs=76.7
Q ss_pred CCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHH----HcCC-CeEEEEcccccCCCCCCCeeEEEec
Q 006905 212 IRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFAL----ERGV-PALIGVLAAERLPYPSRAFDMAHCS 282 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~----erg~-~~~~~v~d~~~Lpf~d~sFDlV~~~ 282 (626)
+.+|||||||+|.++..|+++ .++++|+++.++.... +.++ ..+. .+.+.++|...+|+++++ |.|+..
T Consensus 28 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~-~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~~ 105 (218)
T 3mq2_A 28 DDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKIS-AKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHVL 105 (218)
T ss_dssp SEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHH-HHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHH-HHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEEE
Confidence 458999999999999999886 5899999987776432 2222 2343 577888899999998777 887743
Q ss_pred cccc----cccccHHHHHHHHHhcccCCeEEEEEeCCCCc
Q 006905 283 RCLI----PWNQFGGIYLIEVDRVLRPGGYWILSGPPINW 318 (626)
Q Consensus 283 ~~l~----h~~~~~~~~L~Ei~RvLKPGG~lvis~pp~~w 318 (626)
.+.. |+..++..+|+++.|+|||||.|+++.....|
T Consensus 106 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 145 (218)
T 3mq2_A 106 MPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAW 145 (218)
T ss_dssp SCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGB
T ss_pred ccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccc
Confidence 3221 12233478999999999999999997543333
No 91
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.13 E-value=6.8e-11 Score=120.62 Aligned_cols=99 Identities=8% Similarity=0.160 Sum_probs=78.9
Q ss_pred eeEEeccCchhhHhhhhhCC----CeEEEEeccCccCcccHHHHHHh----cccceeccccccCCCCC-Cccceeeeccc
Q 006905 471 RNILDMNAHLGGFAAALIDF----PVWVMNVVPAEAKINTLGVIYER----GLVGTYTNWCEAMSTYP-RTYDLIHADSV 541 (626)
Q Consensus 471 r~vlD~g~g~G~faa~l~~~----~v~~mnv~~~~~~~~~l~~~~~r----gli~~~~~~~e~~~~yp-~t~Dlih~~~~ 541 (626)
.+|||+|||+|.++.+|++. ++ +|+++|.++.||+.+.++ |+..-+.-.|..+..+| ..||+|.+..+
T Consensus 72 ~~vLDlGcGtG~~~~~la~~~~~~~~---~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~~ 148 (261)
T 4gek_A 72 TQVYDLGCSLGAATLSVRRNIHHDNC---KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNFT 148 (261)
T ss_dssp CEEEEETCTTTHHHHHHHHTCCSSSC---EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEESC
T ss_pred CEEEEEeCCCCHHHHHHHHhcCCCCC---EEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeeee
Confidence 47999999999999988764 44 789999999999999876 33222222356677788 88999999988
Q ss_pred cccCCCCCCHHHHHHHhhhhccCCcEEEEEcC
Q 006905 542 FSLYKDRCETEDILLEMDRILRPEGGVIFRDD 573 (626)
Q Consensus 542 f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~ 573 (626)
+.+.... +...+|.|+.|+|||||.+|++|.
T Consensus 149 l~~~~~~-~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 149 LQFLEPS-ERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp GGGSCHH-HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eeecCch-hHhHHHHHHHHHcCCCcEEEEEec
Confidence 8876532 446799999999999999999864
No 92
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.13 E-value=2.2e-11 Score=124.14 Aligned_cols=93 Identities=16% Similarity=0.178 Sum_probs=76.0
Q ss_pred eeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcccceeccccccCCCCC-CccceeeeccccccCCCCC
Q 006905 471 RNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGLVGTYTNWCEAMSTYP-RTYDLIHADSVFSLYKDRC 549 (626)
Q Consensus 471 r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgli~~~~~~~e~~~~yp-~t~Dlih~~~~f~~~~~~c 549 (626)
.+|||+|||+|.++..|++.+. +|+++|.++.|++.+.++.-+...+.-.|.++ +| ++||+|.|..+|++.
T Consensus 41 ~~vLDvGcGtG~~~~~l~~~~~---~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~-~~~~sfD~v~~~~~~h~~---- 112 (257)
T 4hg2_A 41 GDALDCGCGSGQASLGLAEFFE---RVHAVDPGEAQIRQALRHPRVTYAVAPAEDTG-LPPASVDVAIAAQAMHWF---- 112 (257)
T ss_dssp SEEEEESCTTTTTHHHHHTTCS---EEEEEESCHHHHHTCCCCTTEEEEECCTTCCC-CCSSCEEEEEECSCCTTC----
T ss_pred CCEEEEcCCCCHHHHHHHHhCC---EEEEEeCcHHhhhhhhhcCCceeehhhhhhhc-ccCCcccEEEEeeehhHh----
Confidence 4799999999999999999875 79999999999988876654555553344443 45 999999999998443
Q ss_pred CHHHHHHHhhhhccCCcEEEEE
Q 006905 550 ETEDILLEMDRILRPEGGVIFR 571 (626)
Q Consensus 550 ~~~~~l~E~dRiLRPgG~~i~~ 571 (626)
+.+.++.|+.|||||||.|++.
T Consensus 113 ~~~~~~~e~~rvLkpgG~l~~~ 134 (257)
T 4hg2_A 113 DLDRFWAELRRVARPGAVFAAV 134 (257)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEE
T ss_pred hHHHHHHHHHHHcCCCCEEEEE
Confidence 5688999999999999999885
No 93
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.13 E-value=1.1e-10 Score=119.00 Aligned_cols=100 Identities=14% Similarity=0.183 Sum_probs=79.7
Q ss_pred CceeEEeccCchhhHhhhhhC-CCeEEEEeccCccCcccHHHHHHh----cccceeccccccCCCCCCccceeeeccccc
Q 006905 469 RYRNILDMNAHLGGFAAALID-FPVWVMNVVPAEAKINTLGVIYER----GLVGTYTNWCEAMSTYPRTYDLIHADSVFS 543 (626)
Q Consensus 469 ~~r~vlD~g~g~G~faa~l~~-~~v~~mnv~~~~~~~~~l~~~~~r----gli~~~~~~~e~~~~yp~t~Dlih~~~~f~ 543 (626)
.-.+|||+|||.|+++..|++ .+. +|+.+|.++.+++.+.++ |+...+.-.+..+..+|.+||+|++..+|.
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~fD~v~~~~~l~ 140 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAVEKYDV---NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVDRIVSIGAFE 140 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCCSEEEEESCGG
T ss_pred CcCEEEEECCcccHHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCCCeeEEEEeCchh
Confidence 356899999999999999984 465 899999999999998887 432212212244455679999999999999
Q ss_pred cCCCCCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 544 LYKDRCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 544 ~~~~~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
+... -+...+|.|+.|+|||||.+++.+
T Consensus 141 ~~~~-~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 141 HFGH-ERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp GTCT-TTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hcCh-HHHHHHHHHHHHhcCCCCEEEEEE
Confidence 8854 367899999999999999999975
No 94
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.13 E-value=7.3e-11 Score=117.04 Aligned_cols=101 Identities=14% Similarity=0.186 Sum_probs=76.8
Q ss_pred CCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCC-CeEEEEcccccC-C--CCCCCeeEEEecc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGV-PALIGVLAAERL-P--YPSRAFDMAHCSR 283 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~-~~~~~v~d~~~L-p--f~d~sFDlV~~~~ 283 (626)
..+|||||||+|.++..|++. .++++|+++.++..+.. .+.+.++ ++.+..+|+..+ + +++++||.|++++
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~-~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLA-SAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHH-HHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHH-HHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 458999999999999999875 48899998866654443 3444554 467777786653 4 7789999999986
Q ss_pred ccccccccH--------HHHHHHHHhcccCCeEEEEEeC
Q 006905 284 CLIPWNQFG--------GIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 284 ~l~h~~~~~--------~~~L~Ei~RvLKPGG~lvis~p 314 (626)
.. +|+... ..++.++.|+|||||+|+++..
T Consensus 114 ~~-p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 114 PD-PWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp CC-CCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred CC-CccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 54 554432 2599999999999999999854
No 95
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.12 E-value=2.5e-10 Score=110.82 Aligned_cols=110 Identities=12% Similarity=0.057 Sum_probs=80.5
Q ss_pred HHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCC-CeEEEEcccccCCCC
Q 006905 196 AYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGV-PALIGVLAAERLPYP 272 (626)
Q Consensus 196 ~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~-~~~~~v~d~~~Lpf~ 272 (626)
.....+.+.+...+ +.+|||+|||+|.++..|++. .++++|+++..+..+..+. ...+. .+.+...|....+.+
T Consensus 64 ~~~~~~~~~l~~~~--~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~v~~~~~d~~~~~~~ 140 (210)
T 3lbf_A 64 YMVARMTELLELTP--QSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRL-KNLDLHNVSTRHGDGWQGWQA 140 (210)
T ss_dssp HHHHHHHHHTTCCT--TCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHH-HHTTCCSEEEEESCGGGCCGG
T ss_pred HHHHHHHHhcCCCC--CCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHH-HHcCCCceEEEECCcccCCcc
Confidence 34455556654443 559999999999999999886 6888888775554333322 23344 467777887776666
Q ss_pred CCCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 006905 273 SRAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGPP 315 (626)
Q Consensus 273 d~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~pp 315 (626)
+++||+|++..++++..+ ++.++|||||++++..++
T Consensus 141 ~~~~D~i~~~~~~~~~~~-------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 141 RAPFDAIIVTAAPPEIPT-------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp GCCEEEEEESSBCSSCCT-------HHHHTEEEEEEEEEEECS
T ss_pred CCCccEEEEccchhhhhH-------HHHHhcccCcEEEEEEcC
Confidence 789999999998866553 588999999999998764
No 96
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.12 E-value=2.6e-10 Score=131.27 Aligned_cols=118 Identities=19% Similarity=0.207 Sum_probs=88.1
Q ss_pred HHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhCC-----cEEEeCCccchHHHHHHHHHH-----cCC-CeEEEEc
Q 006905 196 AYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSRN-----IITMSFAPRDTHEAQVQFALE-----RGV-PALIGVL 264 (626)
Q Consensus 196 ~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~~-----V~avdis~~dls~a~i~~A~e-----rg~-~~~~~v~ 264 (626)
..++.+.+.+.... +.+|||||||+|.++..|++++ |+++|+++.++..+..+.... .+. .+.+.++
T Consensus 708 qRle~LLelL~~~~--g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqG 785 (950)
T 3htx_A 708 QRVEYALKHIRESS--ASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDG 785 (950)
T ss_dssp HHHHHHHHHHHHSC--CSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEES
T ss_pred HHHHHHHHHhcccC--CCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEEC
Confidence 34455556655443 5599999999999999999864 778888775555443332221 132 4778888
Q ss_pred ccccCCCCCCCeeEEEeccccccccccH-HHHHHHHHhcccCCeEEEEEeCCC
Q 006905 265 AAERLPYPSRAFDMAHCSRCLIPWNQFG-GIYLIEVDRVLRPGGYWILSGPPI 316 (626)
Q Consensus 265 d~~~Lpf~d~sFDlV~~~~~l~h~~~~~-~~~L~Ei~RvLKPGG~lvis~pp~ 316 (626)
|...+++++++||+|+|..+++|+.+.. ..++.++.|+|||| .++++.+..
T Consensus 786 Da~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 786 SILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp CTTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred chHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 9999999999999999999998887643 46899999999999 888877643
No 97
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.12 E-value=6.5e-11 Score=118.51 Aligned_cols=114 Identities=16% Similarity=0.172 Sum_probs=78.5
Q ss_pred HHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCC-------------------
Q 006905 200 DIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGV------------------- 257 (626)
Q Consensus 200 ~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~------------------- 257 (626)
.+..++......+.+|||||||+|.++..++.. .++++|+++.++..+..... ..+.
T Consensus 45 ~l~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 123 (265)
T 2i62_A 45 NLFKIFCLGAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLK-KEPGAFDWSPVVTYVCDLEGNRM 123 (265)
T ss_dssp HHHHHHHSSSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHT-TCTTCCCCHHHHHHHHHHTTTCS
T ss_pred HHHHHhcccccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHh-cCCccccchhhhhhhhccccccc
Confidence 344444443334568999999999999888876 56788887755443322211 1110
Q ss_pred -----------Ce-EEEEcccccCC-CCC---CCeeEEEeccccccccc---cHHHHHHHHHhcccCCeEEEEEeC
Q 006905 258 -----------PA-LIGVLAAERLP-YPS---RAFDMAHCSRCLIPWNQ---FGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 258 -----------~~-~~~v~d~~~Lp-f~d---~sFDlV~~~~~l~h~~~---~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
.+ .+..+|...++ +++ ++||+|+|+.++++... +...+|.++.|+|||||+|++...
T Consensus 124 ~~~~~~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 124 KGPEKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp CHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred chHHHHHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 04 67777866653 355 89999999999963332 357899999999999999999863
No 98
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.12 E-value=4.6e-11 Score=118.79 Aligned_cols=117 Identities=10% Similarity=0.127 Sum_probs=90.5
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcccceec-cccccCCCCC-CccceeeeccccccCCC
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGLVGTYT-NWCEAMSTYP-RTYDLIHADSVFSLYKD 547 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgli~~~~-~~~e~~~~yp-~t~Dlih~~~~f~~~~~ 547 (626)
-.+|||+|||.|.++.+|++.+. +|+.+|.++.+++.+.++ +.... |..+...++| ++||+|.+..++.+...
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~--~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~ 116 (240)
T 3dli_A 42 CRRVLDIGCGRGEFLELCKEEGI---ESIGVDINEDMIKFCEGK--FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDP 116 (240)
T ss_dssp CSCEEEETCTTTHHHHHHHHHTC---CEEEECSCHHHHHHHHTT--SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCG
T ss_pred CCeEEEEeCCCCHHHHHHHhCCC---cEEEEECCHHHHHHHHhh--cceeeccHHHHhhhcCCCCeeEEEECCchhhCCc
Confidence 46799999999999999998876 689999999999999988 44443 2222222566 99999999999998874
Q ss_pred CCCHHHHHHHhhhhccCCcEEEEEcChH-------------------HHHHHHHHHHhCCCeeE
Q 006905 548 RCETEDILLEMDRILRPEGGVIFRDDVD-------------------ELVKVKRIIDALKWQSQ 592 (626)
Q Consensus 548 ~c~~~~~l~E~dRiLRPgG~~i~~d~~~-------------------~~~~~~~~~~~l~w~~~ 592 (626)
-++..+|.|+.|+|||||++++..... ....++.+++.-.++..
T Consensus 117 -~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~ 179 (240)
T 3dli_A 117 -ERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDV 179 (240)
T ss_dssp -GGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEE
T ss_pred -HHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEE
Confidence 366899999999999999999974321 13566666666666644
No 99
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.12 E-value=2.8e-10 Score=111.37 Aligned_cols=101 Identities=17% Similarity=0.189 Sum_probs=76.9
Q ss_pred CCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCC-CeEEEEcccccCC--CCCCCeeEEEeccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGV-PALIGVLAAERLP--YPSRAFDMAHCSRC 284 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~-~~~~~v~d~~~Lp--f~d~sFDlV~~~~~ 284 (626)
+.+|||||||+|.++..+++. .++++|+++..+..+..+ +...++ .+.+..+|...++ +++++||+|+++..
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDK-VLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHH-HHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHH-HHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 458999999999999988875 588999988655544433 333444 5777888877777 77889999999875
Q ss_pred ccccccc--------HHHHHHHHHhcccCCeEEEEEeC
Q 006905 285 LIPWNQF--------GGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 285 l~h~~~~--------~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
. +|... ...++.++.++|||||.|++...
T Consensus 121 ~-~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 121 D-PWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp C-CCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred C-CccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 4 44321 25799999999999999999753
No 100
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.12 E-value=9.3e-10 Score=114.07 Aligned_cols=131 Identities=12% Similarity=0.086 Sum_probs=84.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCCCeEEE-EcccccCC---CCCCCeeEEEecc
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGVPALIG-VLAAERLP---YPSRAFDMAHCSR 283 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~~~~~~-v~d~~~Lp---f~d~sFDlV~~~~ 283 (626)
.+.+|||||||+|.++..|+++ .|+++|+++.++..+ .+....+... ..++..++ ++..+||+|+|..
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a-----~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~ 159 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWK-----LRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDV 159 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHH-----HHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECC
T ss_pred cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHH-----HHhCcccceecccCceecchhhCCCCCCCEEEEEe
Confidence 3568999999999999998886 589999999877642 2222222221 12233333 3445699999988
Q ss_pred ccccccccHHHHHHHHHhcccCCeEEEEEeCCCCccccc----ccccchhhhhHHHHHHHHHHHHhhchhh
Q 006905 284 CLIPWNQFGGIYLIEVDRVLRPGGYWILSGPPINWKKHA----RGWQRTKEDLNKEQTAIENVAKSLCWEK 350 (626)
Q Consensus 284 ~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~pp~~w~~~~----~~w~~~~e~l~~~~~~ie~l~~~l~w~~ 350 (626)
++++. ..+|.++.|+|||||.|++...|..-.... .+..+..........++..++...+|..
T Consensus 160 sf~sl----~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v 226 (291)
T 3hp7_A 160 SFISL----NLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSV 226 (291)
T ss_dssp SSSCG----GGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEE
T ss_pred eHhhH----HHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEE
Confidence 87543 678999999999999999985443211111 1222333444444566777777777743
No 101
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.12 E-value=7.7e-10 Score=107.16 Aligned_cols=109 Identities=16% Similarity=-0.016 Sum_probs=78.6
Q ss_pred HHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCC-CeEEEEcccccCCCCC
Q 006905 199 DDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGV-PALIGVLAAERLPYPS 273 (626)
Q Consensus 199 ~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~-~~~~~v~d~~~Lpf~d 273 (626)
..+...+.... +.+|||+|||+|.++..+++. .++++|+++..+..+..+.. ..+. .+.+...|........
T Consensus 30 ~~~l~~l~~~~--~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~v~~~~~d~~~~~~~~ 106 (204)
T 3e05_A 30 AVTLSKLRLQD--DLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLK-KFVARNVTLVEAFAPEGLDDL 106 (204)
T ss_dssp HHHHHHTTCCT--TCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHH-HHTCTTEEEEECCTTTTCTTS
T ss_pred HHHHHHcCCCC--CCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHH-HhCCCcEEEEeCChhhhhhcC
Confidence 34444554333 459999999999999999886 48888888765554443332 3344 4667777764443334
Q ss_pred CCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 274 RAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 274 ~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
++||+|++..++. +...++.++.++|||||.+++...
T Consensus 107 ~~~D~i~~~~~~~----~~~~~l~~~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 107 PDPDRVFIGGSGG----MLEEIIDAVDRRLKSEGVIVLNAV 143 (204)
T ss_dssp CCCSEEEESCCTT----CHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CCCCEEEECCCCc----CHHHHHHHHHHhcCCCeEEEEEec
Confidence 6799999988763 458899999999999999999854
No 102
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.12 E-value=2.6e-10 Score=112.53 Aligned_cols=96 Identities=17% Similarity=0.171 Sum_probs=77.1
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc-----cceeccccccCCC--CCCccceeeecc-c
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL-----VGTYTNWCEAMST--YPRTYDLIHADS-V 541 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl-----i~~~~~~~e~~~~--yp~t~Dlih~~~-~ 541 (626)
-.+|||+|||.|.++..|++.+. +|+.+|.++.+++.+.++.- +...+ ..+.. ++.+||+|.+.. +
T Consensus 38 ~~~vLdiG~G~G~~~~~l~~~~~---~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~---~d~~~~~~~~~fD~v~~~~~~ 111 (246)
T 1y8c_A 38 FDDYLDLACGTGNLTENLCPKFK---NTWAVDLSQEMLSEAENKFRSQGLKPRLAC---QDISNLNINRKFDLITCCLDS 111 (246)
T ss_dssp TTEEEEETCTTSTTHHHHGGGSS---EEEEECSCHHHHHHHHHHHHHTTCCCEEEC---CCGGGCCCSCCEEEEEECTTG
T ss_pred CCeEEEeCCCCCHHHHHHHHCCC---cEEEEECCHHHHHHHHHHHhhcCCCeEEEe---cccccCCccCCceEEEEcCcc
Confidence 45899999999999999999875 79999999999998887731 23333 22222 348999999998 9
Q ss_pred cccCCCCCCHHHHHHHhhhhccCCcEEEEE
Q 006905 542 FSLYKDRCETEDILLEMDRILRPEGGVIFR 571 (626)
Q Consensus 542 f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~ 571 (626)
|.+..+.-+...+|.++.|+|||||.+++.
T Consensus 112 l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 112 TNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp GGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred ccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 998854446788999999999999999984
No 103
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.12 E-value=3.1e-10 Score=111.78 Aligned_cols=97 Identities=10% Similarity=0.038 Sum_probs=70.5
Q ss_pred CCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCCCeEEEEccccc----CCCCCCCeeEEEec
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAER----LPYPSRAFDMAHCS 282 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~----Lpf~d~sFDlV~~~ 282 (626)
++.+|||+|||+|.++..|++. .|+++|+++.++. .+++.++.+ .++.+.+.|... .++. ++||+|+|+
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~-~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~ 133 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFE-KLLELVRER-NNIIPLLFDASKPWKYSGIV-EKVDLIYQD 133 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHH-HHHHHHHHC-SSEEEECSCTTCGGGTTTTC-CCEEEEEEC
T ss_pred CCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHH-HHHHHHhcC-CCeEEEEcCCCCchhhcccc-cceeEEEEe
Confidence 4568999999999999888774 5899999886543 344555544 245566666554 3454 789999997
Q ss_pred cccccccccHHHHHHHHHhcccCCeEEEEEe
Q 006905 283 RCLIPWNQFGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 283 ~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
. . .+.....++.++.|+|||||.|+++.
T Consensus 134 ~-~--~~~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 134 I-A--QKNQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp C-C--STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c-c--ChhHHHHHHHHHHHHhCCCCEEEEEE
Confidence 4 2 12333556999999999999999984
No 104
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.11 E-value=1.1e-10 Score=116.05 Aligned_cols=99 Identities=11% Similarity=0.017 Sum_probs=75.3
Q ss_pred CCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcC--CCeEEEEcccccCCCCC-----CCeeEEEe
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERG--VPALIGVLAAERLPYPS-----RAFDMAHC 281 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg--~~~~~~v~d~~~Lpf~d-----~sFDlV~~ 281 (626)
++.+|||||||+|.++..|++. .++++|+++. +++.++++. ..+.+.++|...+++.. ..||+|++
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~-----~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~ 130 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKS-----ALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYM 130 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHH-----HHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHH-----HHHHHHHhCcccCceEEECcccccccccccccccCccEEEE
Confidence 3558999999999999999886 6888888664 444554432 25777777877655332 34999999
Q ss_pred ccccccccc-cHHHHHHHHHhcccCCeEEEEEeC
Q 006905 282 SRCLIPWNQ-FGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 282 ~~~l~h~~~-~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+.+++|... +...++.++.++|||||++++...
T Consensus 131 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 131 RTGFHHIPVEKRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp ESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred cchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 999976653 348999999999999999888754
No 105
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.11 E-value=2.1e-10 Score=111.82 Aligned_cols=120 Identities=11% Similarity=0.051 Sum_probs=81.4
Q ss_pred cHHHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCC---CeEEEEccc
Q 006905 193 GADAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGV---PALIGVLAA 266 (626)
Q Consensus 193 ga~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~---~~~~~v~d~ 266 (626)
..+.+.+.+.+.+... ..+.+|||+|||+|.++..++.+ .|+++|+++.++..+..+ +...++ .+.+..+|.
T Consensus 36 ~~~~~~~~l~~~l~~~-~~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~-~~~~~~~~~~v~~~~~d~ 113 (201)
T 2ift_A 36 TGDRVKETLFNWLMPY-IHQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKN-LQTLKCSSEQAEVINQSS 113 (201)
T ss_dssp --CHHHHHHHHHHHHH-HTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHH-HHHTTCCTTTEEEECSCH
T ss_pred CHHHHHHHHHHHHHHh-cCCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHH-HHHhCCCccceEEEECCH
Confidence 3344545555555421 12458999999999999986665 488899888666544433 334454 567777776
Q ss_pred ccC-C-CCCCC-eeEEEeccccccccccHHHHHHHH--HhcccCCeEEEEEeCCC
Q 006905 267 ERL-P-YPSRA-FDMAHCSRCLIPWNQFGGIYLIEV--DRVLRPGGYWILSGPPI 316 (626)
Q Consensus 267 ~~L-p-f~d~s-FDlV~~~~~l~h~~~~~~~~L~Ei--~RvLKPGG~lvis~pp~ 316 (626)
..+ + +++++ ||+|+++..+ + ......++.++ .|+|||||.++++..+.
T Consensus 114 ~~~~~~~~~~~~fD~I~~~~~~-~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 114 LDFLKQPQNQPHFDVVFLDPPF-H-FNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp HHHTTSCCSSCCEEEEEECCCS-S-SCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred HHHHHhhccCCCCCEEEECCCC-C-CccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 554 3 24678 9999998875 3 23347788888 77899999999986544
No 106
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.11 E-value=2.3e-10 Score=108.85 Aligned_cols=139 Identities=14% Similarity=0.066 Sum_probs=93.1
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc--cceeccccccCCCCC-Cccceeeec-cc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL--VGTYTNWCEAMSTYP-RTYDLIHAD-SV 541 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl--i~~~~~~~e~~~~yp-~t~Dlih~~-~~ 541 (626)
-.+|||+|||+|.++..|++.+. +|+.+|.++.+++.+.++ |+ +.+.++-.+.+..++ .+||+|.++ +.
T Consensus 23 ~~~vLDiGcG~G~~~~~la~~~~---~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~ 99 (185)
T 3mti_A 23 ESIVVDATMGNGNDTAFLAGLSK---KVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGY 99 (185)
T ss_dssp TCEEEESCCTTSHHHHHHHTTSS---EEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC-
T ss_pred CCEEEEEcCCCCHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCC
Confidence 35799999999999999999854 799999999999988766 33 344444444544455 899999876 22
Q ss_pred cccCC-----CCCCHHHHHHHhhhhccCCcEEEEEcC------hHHHHHHHHHHHhCC---CeeEEeecCCCCCCcceEE
Q 006905 542 FSLYK-----DRCETEDILLEMDRILRPEGGVIFRDD------VDELVKVKRIIDALK---WQSQIVDHEDGPLEREKLL 607 (626)
Q Consensus 542 f~~~~-----~~c~~~~~l~E~dRiLRPgG~~i~~d~------~~~~~~~~~~~~~l~---w~~~~~~~e~~~~~~e~~l 607 (626)
+.... ..-....+|.|+.|+|||||.+++..- .+....+.+.+..+. |.+.....-+....+..++
T Consensus 100 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 179 (185)
T 3mti_A 100 LPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLYQPLNQINTPPFLV 179 (185)
T ss_dssp ----------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEEEEESSCSSCCCEEE
T ss_pred CCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEehhhccCCCCCeEE
Confidence 22100 111234688999999999999999642 234566777777766 6665444433333445566
Q ss_pred EEEe
Q 006905 608 FAVK 611 (626)
Q Consensus 608 ~~~K 611 (626)
+..|
T Consensus 180 ~i~~ 183 (185)
T 3mti_A 180 MLEK 183 (185)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5555
No 107
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.11 E-value=1.9e-10 Score=110.61 Aligned_cols=102 Identities=13% Similarity=0.108 Sum_probs=75.8
Q ss_pred CCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccccCC-CCCCCeeEEEecc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAERLP-YPSRAFDMAHCSR 283 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~Lp-f~d~sFDlV~~~~ 283 (626)
+.+|||+|||+|.++..++++ .++++|+++..+..+... +...++ .+.+..+|...++ +.+++||+|+++.
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 101 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKK-LTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNL 101 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH-HHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEE
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcC
Confidence 458999999999999988875 688999887655544333 334444 4677778877775 6678999999987
Q ss_pred cccccc--------ccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 284 CLIPWN--------QFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 284 ~l~h~~--------~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
.+.+.. .+...++.++.++|||||++++...
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 140 (197)
T 3eey_A 102 GYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY 140 (197)
T ss_dssp SBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence 552211 1235799999999999999999864
No 108
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.11 E-value=1.4e-10 Score=108.62 Aligned_cols=129 Identities=17% Similarity=0.190 Sum_probs=96.1
Q ss_pred CceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc-cceeccccccCCCCC-CccceeeeccccccCC
Q 006905 469 RYRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL-VGTYTNWCEAMSTYP-RTYDLIHADSVFSLYK 546 (626)
Q Consensus 469 ~~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl-i~~~~~~~e~~~~yp-~t~Dlih~~~~f~~~~ 546 (626)
.-.+|||+|||.|.++..|++..- +|+.+|.++.+++.+.++.- +..++ .. ..+| ++||+|.+..++.+..
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~v~~~~---~d-~~~~~~~~D~v~~~~~l~~~~ 89 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFAT---KLYCIDINVIALKEVKEKFDSVITLS---DP-KEIPDNSVDFILFANSFHDMD 89 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTEE---EEEEECSCHHHHHHHHHHCTTSEEES---SG-GGSCTTCEEEEEEESCSTTCS
T ss_pred CCCeEEEECCCCCHHHHHHHhhcC---eEEEEeCCHHHHHHHHHhCCCcEEEe---CC-CCCCCCceEEEEEccchhccc
Confidence 357899999999999999999862 89999999999999998821 22332 23 4455 8999999999999886
Q ss_pred CCCCHHHHHHHhhhhccCCcEEEEEcChH-------------HHHHHHHHHHhCCCeeEEeecCCCCCCcceEEEEEec
Q 006905 547 DRCETEDILLEMDRILRPEGGVIFRDDVD-------------ELVKVKRIIDALKWQSQIVDHEDGPLEREKLLFAVKL 612 (626)
Q Consensus 547 ~~c~~~~~l~E~dRiLRPgG~~i~~d~~~-------------~~~~~~~~~~~l~w~~~~~~~e~~~~~~e~~l~~~K~ 612 (626)
+...+|.|+.|+|||||.+++.+... ....++++++ .|+......- + .....+++.|+
T Consensus 90 ---~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~~--~-~~~~~l~~~~~ 160 (170)
T 3i9f_A 90 ---DKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFNP--T-PYHFGLVLKRK 160 (170)
T ss_dssp ---CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEECS--S-TTEEEEEEEEC
T ss_pred ---CHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccCC--C-CceEEEEEecC
Confidence 56899999999999999999985321 2456666666 6665433211 1 24567777664
No 109
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.11 E-value=2.9e-10 Score=106.87 Aligned_cols=110 Identities=14% Similarity=0.046 Sum_probs=75.0
Q ss_pred HHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCCC-eEEEEccc-ccCC
Q 006905 197 YIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGVP-ALIGVLAA-ERLP 270 (626)
Q Consensus 197 yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~~-~~~~v~d~-~~Lp 270 (626)
....+.+.+... ++.+|||+|||+|.++..+++. .++++|+++..+..+. +.+...+.+ ..+...+. +.++
T Consensus 13 ~~~~~~~~~~~~--~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~-~~~~~~~~~~~~~~~~d~~~~~~ 89 (178)
T 3hm2_A 13 VRALAISALAPK--PHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERIL-SNAINLGVSDRIAVQQGAPRAFD 89 (178)
T ss_dssp HHHHHHHHHCCC--TTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHH-HHHHTTTCTTSEEEECCTTGGGG
T ss_pred HHHHHHHHhccc--CCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHH-HHHHHhCCCCCEEEecchHhhhh
Confidence 334445555433 3558999999999999998876 4788888775444332 222334554 22555554 3444
Q ss_pred CCCCCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 271 YPSRAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 271 f~d~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
..+++||+|+++.++++ ..++.++.++|||||.+++...
T Consensus 90 ~~~~~~D~i~~~~~~~~-----~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 90 DVPDNPDVIFIGGGLTA-----PGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp GCCSCCSEEEECC-TTC-----TTHHHHHHHTCCTTCEEEEEEC
T ss_pred ccCCCCCEEEECCcccH-----HHHHHHHHHhcCCCCEEEEEee
Confidence 43478999999998854 5689999999999999999854
No 110
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.11 E-value=1.5e-10 Score=113.84 Aligned_cols=101 Identities=14% Similarity=0.148 Sum_probs=76.0
Q ss_pred CCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCC-CeEEEEcccccCC--CCCCCeeEEEeccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGV-PALIGVLAAERLP--YPSRAFDMAHCSRC 284 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~-~~~~~v~d~~~Lp--f~d~sFDlV~~~~~ 284 (626)
..+|||||||+|.++..|++. .++++|+++.++..+.. .+.+.+. ++.+..+|+..++ +++++||.|+++..
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~-~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQ-KVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHH-HHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHH-HHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 458999999999999998875 58888887765554333 3334454 4677778877776 77889999998765
Q ss_pred ccccccc--------HHHHHHHHHhcccCCeEEEEEeC
Q 006905 285 LIPWNQF--------GGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 285 l~h~~~~--------~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
. +|... ...++.++.++|||||.|++...
T Consensus 118 ~-p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 118 D-PWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp C-CCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES
T ss_pred C-CCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeC
Confidence 4 44321 26789999999999999999853
No 111
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.11 E-value=8.3e-11 Score=116.29 Aligned_cols=87 Identities=15% Similarity=0.241 Sum_probs=71.5
Q ss_pred CCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCCeEEEEccc-ccCCCC-CCCeeEEEecccccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVPALIGVLAA-ERLPYP-SRAFDMAHCSRCLIP 287 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~-~~Lpf~-d~sFDlV~~~~~l~h 287 (626)
+.+|||||||+|.++..|++. .++++|+++ .+++.++++...+.+...|. ..+|++ +++||+|+++.
T Consensus 49 ~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~---- 119 (226)
T 3m33_A 49 QTRVLEAGCGHGPDAARFGPQAARWAAYDFSP-----ELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRR---- 119 (226)
T ss_dssp TCEEEEESCTTSHHHHHHGGGSSEEEEEESCH-----HHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEES----
T ss_pred CCeEEEeCCCCCHHHHHHHHcCCEEEEEECCH-----HHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCC----
Confidence 458999999999999999987 466666644 56667766666678888887 678888 89999999972
Q ss_pred ccccHHHHHHHHHhcccCCeEEE
Q 006905 288 WNQFGGIYLIEVDRVLRPGGYWI 310 (626)
Q Consensus 288 ~~~~~~~~L~Ei~RvLKPGG~lv 310 (626)
+...++.++.++|||||.++
T Consensus 120 ---~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 120 ---GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp ---CCSGGGGGHHHHEEEEEEEE
T ss_pred ---CHHHHHHHHHHHcCCCcEEE
Confidence 34678999999999999999
No 112
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.10 E-value=3.6e-10 Score=114.15 Aligned_cols=111 Identities=12% Similarity=0.118 Sum_probs=79.6
Q ss_pred HHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC-----CcEEEeCCcc------chHHHHHHHHHHcCC--CeEEEEcc-
Q 006905 200 DIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR-----NIITMSFAPR------DTHEAQVQFALERGV--PALIGVLA- 265 (626)
Q Consensus 200 ~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~------dls~a~i~~A~erg~--~~~~~v~d- 265 (626)
.+.+.+... ++.+|||||||+|.++..++++ .++++|+++. ++..++. .....+. .+.+...|
T Consensus 34 ~l~~~~~~~--~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~-~~~~~~~~~~v~~~~~d~ 110 (275)
T 3bkx_A 34 AIAEAWQVK--PGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWN-HLLAGPLGDRLTVHFNTN 110 (275)
T ss_dssp HHHHHHTCC--TTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHH-HHHTSTTGGGEEEECSCC
T ss_pred HHHHHcCCC--CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHH-HHHhcCCCCceEEEECCh
Confidence 444444333 3559999999999999988874 5888999875 4543333 3333343 36677776
Q ss_pred --cccCCCCCCCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 266 --AERLPYPSRAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 266 --~~~Lpf~d~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
...+|+++++||+|++..+++|+.+ +..++..+.++++|||++++...
T Consensus 111 ~~~~~~~~~~~~fD~v~~~~~l~~~~~-~~~~~~~~~~l~~~gG~l~~~~~ 160 (275)
T 3bkx_A 111 LSDDLGPIADQHFDRVVLAHSLWYFAS-ANALALLFKNMAAVCDHVDVAEW 160 (275)
T ss_dssp TTTCCGGGTTCCCSEEEEESCGGGSSC-HHHHHHHHHHHTTTCSEEEEEEE
T ss_pred hhhccCCCCCCCEEEEEEccchhhCCC-HHHHHHHHHHHhCCCCEEEEEEe
Confidence 5567788899999999999977765 45667777777777999999753
No 113
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.10 E-value=1.3e-10 Score=114.45 Aligned_cols=95 Identities=19% Similarity=0.257 Sum_probs=77.6
Q ss_pred eeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc--cceeccccccCCCCCCccceeeeccccccCCCC
Q 006905 471 RNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL--VGTYTNWCEAMSTYPRTYDLIHADSVFSLYKDR 548 (626)
Q Consensus 471 r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl--i~~~~~~~e~~~~yp~t~Dlih~~~~f~~~~~~ 548 (626)
.+|||+|||.|.++..|++.+. +|+.+|.++.+++.+.++.- +..++.-.+.+ ..+.+||+|++..++.|..
T Consensus 44 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~~-- 117 (250)
T 2p7i_A 44 GNLLELGSFKGDFTSRLQEHFN---DITCVEASEEAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTHVLEHID-- 117 (250)
T ss_dssp SCEEEESCTTSHHHHHHTTTCS---CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEESCGGGCS--
T ss_pred CcEEEECCCCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc-CcCCcccEEEEhhHHHhhc--
Confidence 3699999999999999998865 78999999999999998842 33333222233 2248999999999999886
Q ss_pred CCHHHHHHHhh-hhccCCcEEEEEc
Q 006905 549 CETEDILLEMD-RILRPEGGVIFRD 572 (626)
Q Consensus 549 c~~~~~l~E~d-RiLRPgG~~i~~d 572 (626)
+.+.+|.|+. |+|||||++++.+
T Consensus 118 -~~~~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 118 -DPVALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp -SHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred -CHHHHHHHHHHHhcCCCCEEEEEc
Confidence 4589999999 9999999999986
No 114
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.10 E-value=1.6e-10 Score=119.17 Aligned_cols=101 Identities=12% Similarity=0.106 Sum_probs=79.9
Q ss_pred CceeEEeccCchhhHhhhhhCC-CeEEEEeccCccCcccHHHHHHh----cccceeccccccCCCCCCccceeeeccccc
Q 006905 469 RYRNILDMNAHLGGFAAALIDF-PVWVMNVVPAEAKINTLGVIYER----GLVGTYTNWCEAMSTYPRTYDLIHADSVFS 543 (626)
Q Consensus 469 ~~r~vlD~g~g~G~faa~l~~~-~v~~mnv~~~~~~~~~l~~~~~r----gli~~~~~~~e~~~~yp~t~Dlih~~~~f~ 543 (626)
.-.+|||+|||.|+++..|++. +. +|+.+|.++.+++.+.++ |+-+.++-.+..+..++.+||+|.+..+|.
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~~~~~~~ 148 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAEYDV---NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDEPVDRIVSLGAFE 148 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCC---EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGCCCCCSEEEEESCGG
T ss_pred CcCEEEEeeccCcHHHHHHHHhCCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHcCCCccEEEEcchHH
Confidence 3568999999999999999987 74 799999999999988877 332111112233334489999999999999
Q ss_pred cCCCC------CCHHHHHHHhhhhccCCcEEEEEc
Q 006905 544 LYKDR------CETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 544 ~~~~~------c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
+..+. -++..+|.++.|+|||||.+++.+
T Consensus 149 ~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 149 HFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp GTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred hcCccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 88543 456789999999999999999975
No 115
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.10 E-value=1.1e-09 Score=117.78 Aligned_cols=110 Identities=15% Similarity=0.185 Sum_probs=80.7
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhc----c-cceeccccccCCCC--C-Cccceeeeccc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERG----L-VGTYTNWCEAMSTY--P-RTYDLIHADSV 541 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rg----l-i~~~~~~~e~~~~y--p-~t~Dlih~~~~ 541 (626)
-.+|||+|||+|.++..|++.+. +|+.+|.++.+++.+.++- + +.+++ ..+... + .+||+|.++..
T Consensus 234 ~~~VLDlGcG~G~~~~~la~~g~---~V~gvDis~~al~~A~~n~~~~~~~v~~~~---~D~~~~~~~~~~fD~Ii~npp 307 (381)
T 3dmg_A 234 GRQVLDLGAGYGALTLPLARMGA---EVVGVEDDLASVLSLQKGLEANALKAQALH---SDVDEALTEEARFDIIVTNPP 307 (381)
T ss_dssp TCEEEEETCTTSTTHHHHHHTTC---EEEEEESBHHHHHHHHHHHHHTTCCCEEEE---CSTTTTSCTTCCEEEEEECCC
T ss_pred CCEEEEEeeeCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCeEEEE---cchhhccccCCCeEEEEECCc
Confidence 45899999999999999999875 8999999989998877652 2 23333 222222 3 79999999988
Q ss_pred cccCCC--CCCHHHHHHHhhhhccCCcEEEEEcCh--HHHHHHHHHHH
Q 006905 542 FSLYKD--RCETEDILLEMDRILRPEGGVIFRDDV--DELVKVKRIID 585 (626)
Q Consensus 542 f~~~~~--~c~~~~~l~E~dRiLRPgG~~i~~d~~--~~~~~~~~~~~ 585 (626)
|.+... .-....++.++.|+|||||.++|.... .....+++...
T Consensus 308 ~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~~~l~~~f~ 355 (381)
T 3dmg_A 308 FHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLKYEPLLEEKFG 355 (381)
T ss_dssp CCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTSCHHHHHHHHHS
T ss_pred hhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCCChHHHHHHhhc
Confidence 886432 224567999999999999999997543 23444555443
No 116
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.09 E-value=1.1e-10 Score=116.36 Aligned_cols=131 Identities=18% Similarity=0.148 Sum_probs=96.9
Q ss_pred hhhhcCCCCCceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc----cceeccccccCCCCC-Cccc
Q 006905 460 MNNQLGQSGRYRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL----VGTYTNWCEAMSTYP-RTYD 534 (626)
Q Consensus 460 ~~~~~~~~~~~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl----i~~~~~~~e~~~~yp-~t~D 534 (626)
++..+.. ..-.+|||+|||.|.++..|++.+ ..+|+.+|.++.+++.+.++.- +...+.-.+.+ .+| ++||
T Consensus 85 ~l~~l~~-~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~-~~~~~~fD 160 (254)
T 1xtp_A 85 FIASLPG-HGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETA-TLPPNTYD 160 (254)
T ss_dssp HHHTSTT-CCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGC-CCCSSCEE
T ss_pred HHHhhcc-cCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHC-CCCCCCeE
Confidence 3443433 446789999999999999998875 2368899999999999988742 33333212222 244 8999
Q ss_pred eeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh----------------HHHHHHHHHHHhCCCeeEEee
Q 006905 535 LIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV----------------DELVKVKRIIDALKWQSQIVD 595 (626)
Q Consensus 535 lih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~----------------~~~~~~~~~~~~l~w~~~~~~ 595 (626)
+|++..++.+..+ -+...+|.++.|+|||||++++.+.. -....++++++...++.....
T Consensus 161 ~v~~~~~l~~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 236 (254)
T 1xtp_A 161 LIVIQWTAIYLTD-ADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEA 236 (254)
T ss_dssp EEEEESCGGGSCH-HHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEE
T ss_pred EEEEcchhhhCCH-HHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEee
Confidence 9999999998853 24678999999999999999998741 124778888888888876443
No 117
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.09 E-value=3e-10 Score=114.66 Aligned_cols=91 Identities=21% Similarity=0.367 Sum_probs=74.5
Q ss_pred CCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCCCeeEEEeccccc
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSRAFDMAHCSRCLI 286 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~ 286 (626)
++.+|||||||+|.++..+++. .++++|+++ .+++.+++++..+.+.+.|...+|+++++||+|+++.+.
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~- 158 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSK-----VAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAP- 158 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCH-----HHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCC-
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCH-----HHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCCh-
Confidence 3568999999999999999876 466666644 566777777766788888888899999999999987653
Q ss_pred cccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 287 PWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 287 h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
.++.++.|+|||||.+++..+
T Consensus 159 -------~~l~~~~~~L~pgG~l~~~~~ 179 (269)
T 1p91_A 159 -------CKAEELARVVKPGGWVITATP 179 (269)
T ss_dssp -------CCHHHHHHHEEEEEEEEEEEE
T ss_pred -------hhHHHHHHhcCCCcEEEEEEc
Confidence 248999999999999999865
No 118
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.09 E-value=1.4e-10 Score=108.22 Aligned_cols=123 Identities=15% Similarity=0.126 Sum_probs=82.3
Q ss_pred CCCcHHHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccc
Q 006905 190 FPNGADAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAE 267 (626)
Q Consensus 190 F~~ga~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~ 267 (626)
+........+.+.+.+......+.+|||+|||+|.++..++++ .++++|+++..+..+..+. ...+..+.+...|..
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~~~~~d~~ 98 (171)
T 1ws6_A 20 ARPSPVRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENV-RRTGLGARVVALPVE 98 (171)
T ss_dssp CCCCCHHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHH-HHHTCCCEEECSCHH
T ss_pred CCCCHHHHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH-HHcCCceEEEeccHH
Confidence 3344555666666666532113458999999999999999886 4788888775554443333 233446677777755
Q ss_pred c-CCC---CCCCeeEEEeccccccccccHHHHHHHHH--hcccCCeEEEEEeCCC
Q 006905 268 R-LPY---PSRAFDMAHCSRCLIPWNQFGGIYLIEVD--RVLRPGGYWILSGPPI 316 (626)
Q Consensus 268 ~-Lpf---~d~sFDlV~~~~~l~h~~~~~~~~L~Ei~--RvLKPGG~lvis~pp~ 316 (626)
. ++. ..++||+|+++..++ .....++..+. ++|||||.++++.++.
T Consensus 99 ~~~~~~~~~~~~~D~i~~~~~~~---~~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 99 VFLPEAKAQGERFTVAFMAPPYA---MDLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp HHHHHHHHTTCCEEEEEECCCTT---SCTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred HHHHhhhccCCceEEEEECCCCc---hhHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 4 221 134799999988763 23356677777 9999999999987543
No 119
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.09 E-value=9.8e-11 Score=114.08 Aligned_cols=100 Identities=18% Similarity=0.308 Sum_probs=81.6
Q ss_pred CCceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc----cceeccccccCCCC--CCccceeeeccc
Q 006905 468 GRYRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL----VGTYTNWCEAMSTY--PRTYDLIHADSV 541 (626)
Q Consensus 468 ~~~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl----i~~~~~~~e~~~~y--p~t~Dlih~~~~ 541 (626)
..-.+|||+|||.|.++..|++.+. +|+.+|.++.+++.+.++.- +..++ ..+..+ +.+||+|.|..+
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~---~d~~~~~~~~~fD~v~~~~~ 123 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHCK---RLTVIDVMPRAIGRACQRTKRWSHISWAA---TDILQFSTAELFDLIVVAEV 123 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGEE---EEEEEESCHHHHHHHHHHTTTCSSEEEEE---CCTTTCCCSCCEEEEEEESC
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHhcccCCCeEEEE---cchhhCCCCCCccEEEEccH
Confidence 5578899999999999999999853 89999999999999988753 23333 333333 399999999999
Q ss_pred cccCCCCCCHHHHHHHhhhhccCCcEEEEEcC
Q 006905 542 FSLYKDRCETEDILLEMDRILRPEGGVIFRDD 573 (626)
Q Consensus 542 f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~ 573 (626)
|.+..+.-.+..+|.++.|+|||||.+++++.
T Consensus 124 l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 124 LYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp GGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred HHhCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 99988654556789999999999999999753
No 120
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.08 E-value=2.6e-10 Score=110.24 Aligned_cols=95 Identities=14% Similarity=0.204 Sum_probs=76.3
Q ss_pred eEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc---cceeccccccCCCCC-Cccceeeeccccc
Q 006905 472 NILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL---VGTYTNWCEAMSTYP-RTYDLIHADSVFS 543 (626)
Q Consensus 472 ~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~~~~e~~~~yp-~t~Dlih~~~~f~ 543 (626)
+|||+|||.|.++..|++.+ ..+|+.+|.++.+++.+.++ |+ +..++.-.+.++ +| ++||+|.+..++.
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~--~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~~~~l~ 122 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQS--DFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIP-IEDNYADLIVSRGSVF 122 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHS--EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCS-SCTTCEEEEEEESCGG
T ss_pred EEEEECCCCCHHHHHHHHcC--CCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCC-CCcccccEEEECchHh
Confidence 89999999999999999872 24899999999999988887 33 233332122222 44 8999999999999
Q ss_pred cCCCCCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 544 LYKDRCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 544 ~~~~~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
+.. +...+|.|+.|+|||||.+++.+
T Consensus 123 ~~~---~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 123 FWE---DVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp GCS---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcc---CHHHHHHHHHHhCCCCCEEEEEe
Confidence 885 56899999999999999999975
No 121
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.08 E-value=8.6e-11 Score=114.00 Aligned_cols=97 Identities=18% Similarity=0.228 Sum_probs=78.7
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc--cceeccccccCCC-CC-CccceeeeccccccC
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL--VGTYTNWCEAMST-YP-RTYDLIHADSVFSLY 545 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl--i~~~~~~~e~~~~-yp-~t~Dlih~~~~f~~~ 545 (626)
-.+|||+|||.|.++..|++.+. +|+.+|.++.+++.+.++|+ +...+ ..+.. +| .+||+|.+..++.+.
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~---~d~~~~~~~~~~D~v~~~~~l~~~ 120 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGLAD---RVTALDGSAEMIAEAGRHGLDNVEFRQ---QDLFDWTPDRQWDAVFFAHWLAHV 120 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHGGGCCTTEEEEE---CCTTSCCCSSCEEEEEEESCGGGS
T ss_pred CCeEEEECCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHhcCCCCeEEEe---cccccCCCCCceeEEEEechhhcC
Confidence 34899999999999999998865 88999999999999999775 22333 22222 44 999999999999988
Q ss_pred CCCCCHHHHHHHhhhhccCCcEEEEEcC
Q 006905 546 KDRCETEDILLEMDRILRPEGGVIFRDD 573 (626)
Q Consensus 546 ~~~c~~~~~l~E~dRiLRPgG~~i~~d~ 573 (626)
.+ -.+..+|.++.|+|||||.+++.+.
T Consensus 121 ~~-~~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 121 PD-DRFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp CH-HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CH-HHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 74 2357899999999999999999853
No 122
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.08 E-value=2.1e-10 Score=111.47 Aligned_cols=120 Identities=18% Similarity=0.109 Sum_probs=92.5
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcccceeccccccCCCCCCccceeeeccccccCCCCC
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGLVGTYTNWCEAMSTYPRTYDLIHADSVFSLYKDRC 549 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgli~~~~~~~e~~~~yp~t~Dlih~~~~f~~~~~~c 549 (626)
-.+|||+|||.|.++..|++.+. +|+.+|.++.+++.+.++--+.....-.+.+. .+.+||+|.+..++.+... -
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~-~ 118 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAAGF---DVDATDGSPELAAEASRRLGRPVRTMLFHQLD-AIDAYDAVWAHACLLHVPR-D 118 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHTSCCEECCGGGCC-CCSCEEEEEECSCGGGSCH-H
T ss_pred CCcEEEECCCCCHHHHHHHHcCC---eEEEECCCHHHHHHHHHhcCCceEEeeeccCC-CCCcEEEEEecCchhhcCH-H
Confidence 45799999999999999999876 78999999999999998832222221122233 3499999999999988762 2
Q ss_pred CHHHHHHHhhhhccCCcEEEEEcCh---------------HHHHHHHHHHHhCC-CeeEEe
Q 006905 550 ETEDILLEMDRILRPEGGVIFRDDV---------------DELVKVKRIIDALK-WQSQIV 594 (626)
Q Consensus 550 ~~~~~l~E~dRiLRPgG~~i~~d~~---------------~~~~~~~~~~~~l~-w~~~~~ 594 (626)
++..+|.|+.|+|||||++++.... -....++++++.-. ++....
T Consensus 119 ~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~ 179 (211)
T 3e23_A 119 ELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAV 179 (211)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEE
Confidence 5578999999999999999997321 14678888888888 887643
No 123
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.07 E-value=1.2e-09 Score=107.89 Aligned_cols=121 Identities=16% Similarity=0.106 Sum_probs=93.7
Q ss_pred eeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc----cceeccccccCCCCC--Cccceeeecccccc
Q 006905 471 RNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL----VGTYTNWCEAMSTYP--RTYDLIHADSVFSL 544 (626)
Q Consensus 471 r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl----i~~~~~~~e~~~~yp--~t~Dlih~~~~f~~ 544 (626)
.+|||+|||.|.++..|++.+. +|+.+|.++.+++.+.++.- ...+.-.+..+..+| .+||+|.+..+|.+
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~ 144 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPER---FVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYVFFCA 144 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTE---EEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEESSTTT
T ss_pred CCEEEeCCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEEChhhhc
Confidence 4899999999999999999875 79999999999999888752 111222233444443 79999999999988
Q ss_pred CCCCCCHHHHHHHhhhhccCCcEEEEEcCh-----------HHHHHHHHHHHhCCCeeEEee
Q 006905 545 YKDRCETEDILLEMDRILRPEGGVIFRDDV-----------DELVKVKRIIDALKWQSQIVD 595 (626)
Q Consensus 545 ~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~-----------~~~~~~~~~~~~l~w~~~~~~ 595 (626)
... .+...+|.++.|+|||||++++.+-. -....++++++.-.|+...+.
T Consensus 145 ~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 205 (235)
T 3lcc_A 145 IEP-EMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVE 205 (235)
T ss_dssp SCG-GGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEE
T ss_pred CCH-HHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEE
Confidence 763 46789999999999999999986421 136788899999899876543
No 124
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.07 E-value=1.8e-10 Score=124.32 Aligned_cols=123 Identities=11% Similarity=-0.026 Sum_probs=90.2
Q ss_pred CCCCCCcHHHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHH------HHHcC
Q 006905 187 GTMFPNGADAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQF------ALERG 256 (626)
Q Consensus 187 gt~F~~ga~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~------A~erg 256 (626)
...|++.....+..+.+.+.+.. +.+|||||||+|.++..++.. .++++|+++..+..+..+. +...|
T Consensus 151 ~~vYGEt~~~~i~~il~~l~l~~--gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~G 228 (438)
T 3uwp_A 151 PEVYGETSFDLVAQMIDEIKMTD--DDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYG 228 (438)
T ss_dssp GGGGGGTHHHHHHHHHHHHCCCT--TCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcccCCCCHHHHHHHHHhcCCCC--CCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 34566667777777777776554 458999999999999888753 3899999875544333221 22334
Q ss_pred C---CeEEEEcccccCCCCC--CCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEe
Q 006905 257 V---PALIGVLAAERLPYPS--RAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 257 ~---~~~~~v~d~~~Lpf~d--~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
+ .+.+..+|+..+|+.+ ..||+|+++..+ + ..+....|.++.|+|||||.|++..
T Consensus 229 l~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~-F-~pdl~~aL~Ei~RvLKPGGrIVssE 288 (438)
T 3uwp_A 229 KKHAEYTLERGDFLSEEWRERIANTSVIFVNNFA-F-GPEVDHQLKERFANMKEGGRIVSSK 288 (438)
T ss_dssp BCCCEEEEEECCTTSHHHHHHHHTCSEEEECCTT-C-CHHHHHHHHHHHTTSCTTCEEEESS
T ss_pred CCCCCeEEEECcccCCccccccCCccEEEEcccc-c-CchHHHHHHHHHHcCCCCcEEEEee
Confidence 3 4778888988888754 479999998765 3 3455788999999999999999864
No 125
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.07 E-value=2.1e-10 Score=115.25 Aligned_cols=98 Identities=19% Similarity=0.271 Sum_probs=77.9
Q ss_pred CCceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc--cceeccccccCCCCC-Cccceeeecc
Q 006905 468 GRYRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL--VGTYTNWCEAMSTYP-RTYDLIHADS 540 (626)
Q Consensus 468 ~~~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl--i~~~~~~~e~~~~yp-~t~Dlih~~~ 540 (626)
..-.+|||+|||.|.++..|++..- +|+.+|.++.+++.+.++ |+ +.....-.+.+ ++| ++||+|++..
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l-~~~~~~fD~V~~~~ 111 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFVK---KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQM-PFTDERFHIVTCRI 111 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CC-CSCTTCEEEEEEES
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhC-CCCCCCEEEEEEhh
Confidence 3466899999999999999998854 899999999999988776 33 23333111222 245 8999999999
Q ss_pred ccccCCCCCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 541 VFSLYKDRCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 541 ~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
++.+.. +.+.+|.|+.|+|||||++++.+
T Consensus 112 ~l~~~~---d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 112 AAHHFP---NPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp CGGGCS---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhHhcC---CHHHHHHHHHHHcCCCCEEEEEE
Confidence 998886 56899999999999999999974
No 126
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.06 E-value=6.7e-10 Score=117.76 Aligned_cols=99 Identities=14% Similarity=0.153 Sum_probs=78.0
Q ss_pred CCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCCC--eEEEEcccccCCCCCCCeeEEEeccccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGVP--ALIGVLAAERLPYPSRAFDMAHCSRCLI 286 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~~--~~~~v~d~~~Lpf~d~sFDlV~~~~~l~ 286 (626)
+.+|||||||+|.++..++++ .|+++|+++ ++.. +.+.+...+.. +.+..++...+++++++||+|++....+
T Consensus 67 ~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~-a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~ 144 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDY-AVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGY 144 (349)
T ss_dssp TCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHH-HHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBB
T ss_pred CCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHH-HHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccccc
Confidence 458999999999999999987 688999984 4443 33445555654 7888899999999989999999966432
Q ss_pred --cccccHHHHHHHHHhcccCCeEEEEE
Q 006905 287 --PWNQFGGIYLIEVDRVLRPGGYWILS 312 (626)
Q Consensus 287 --h~~~~~~~~L~Ei~RvLKPGG~lvis 312 (626)
+.......++.++.|+|||||+++..
T Consensus 145 ~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 145 CLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp TBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred cccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 33345588999999999999999853
No 127
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.06 E-value=1.4e-10 Score=115.93 Aligned_cols=99 Identities=16% Similarity=0.241 Sum_probs=79.4
Q ss_pred CCceeEEeccCchhhHhhhhhCC-CeEEEEeccCccCcccHHHHHHhcc----cceec-cccccCCCCC-Cccceeeecc
Q 006905 468 GRYRNILDMNAHLGGFAAALIDF-PVWVMNVVPAEAKINTLGVIYERGL----VGTYT-NWCEAMSTYP-RTYDLIHADS 540 (626)
Q Consensus 468 ~~~r~vlD~g~g~G~faa~l~~~-~v~~mnv~~~~~~~~~l~~~~~rgl----i~~~~-~~~e~~~~yp-~t~Dlih~~~ 540 (626)
..-.+|||+|||.|.++..|++. +. +|+.+|.++.+++.+.++.- +...+ |.. .+ ++| ++||+|++..
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~-~~-~~~~~~fD~v~~~~ 128 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKYGA---HTHGIDICSNIVNMANERVSGNNKIIFEANDIL-TK-EFPENNFDLIYSRD 128 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHTCCSCTTEEEEECCTT-TC-CCCTTCEEEEEEES
T ss_pred CCCCEEEEECCCCCHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHhhcCCCeEEEECccc-cC-CCCCCcEEEEeHHH
Confidence 34568999999999999999987 54 89999999999999998863 33333 222 22 344 8999999999
Q ss_pred ccccCCCCCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 541 VFSLYKDRCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 541 ~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
++.+... -+...+|.|+.|+|||||.+++.+
T Consensus 129 ~l~~~~~-~~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 129 AILALSL-ENKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp CGGGSCH-HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHhcCh-HHHHHHHHHHHHHcCCCCEEEEEE
Confidence 9998832 256889999999999999999986
No 128
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.06 E-value=5.8e-10 Score=105.65 Aligned_cols=133 Identities=14% Similarity=0.010 Sum_probs=88.8
Q ss_pred CCceecCCCCCCCCCcHHHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHH
Q 006905 178 GDRFRFPGGGTMFPNGADAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALE 254 (626)
Q Consensus 178 ge~~~Fp~ggt~F~~ga~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~e 254 (626)
+..+..+.+. ......+.+.+.+.+.+... ..+.+|||+|||+|.++..++++ .++++|+++..+..+..+. ..
T Consensus 13 ~~~~~~~~~~-~~rp~~~~~~~~~~~~l~~~-~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~-~~ 89 (187)
T 2fhp_A 13 GRRLKALDGD-NTRPTTDKVKESIFNMIGPY-FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENI-AI 89 (187)
T ss_dssp TCBCCCCCCC-SSCCCCHHHHHHHHHHHCSC-CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHH-HH
T ss_pred CccccCCCCC-CcCcCHHHHHHHHHHHHHhh-cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHH-HH
Confidence 3455555443 34445566767777766421 23458999999999999988765 5889998876555444333 33
Q ss_pred cCC--CeEEEEcccccC----CCCCCCeeEEEeccccccccccHHHHHHHH--HhcccCCeEEEEEeCC
Q 006905 255 RGV--PALIGVLAAERL----PYPSRAFDMAHCSRCLIPWNQFGGIYLIEV--DRVLRPGGYWILSGPP 315 (626)
Q Consensus 255 rg~--~~~~~v~d~~~L----pf~d~sFDlV~~~~~l~h~~~~~~~~L~Ei--~RvLKPGG~lvis~pp 315 (626)
.++ .+.+...|.... ++.+++||+|+++..++ . ......+..+ .++|+|||.+++..+.
T Consensus 90 ~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~~~-~-~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 90 TKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPPYA-K-QEIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp HTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCGG-G-CCHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred hCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECCCCC-c-hhHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 343 367777775442 23367899999988752 2 2346677777 9999999999998653
No 129
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.06 E-value=5e-10 Score=109.13 Aligned_cols=134 Identities=17% Similarity=0.124 Sum_probs=99.2
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhc----c--cceeccccccCCC--CC-Cccceeeecc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERG----L--VGTYTNWCEAMST--YP-RTYDLIHADS 540 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rg----l--i~~~~~~~e~~~~--yp-~t~Dlih~~~ 540 (626)
-.+|||+|||.|.++..|++..--..+|+.+|.++.+++.+.++. + +.+.. ..+.. ++ .+||+|.+..
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~---~d~~~~~~~~~~fD~v~~~~ 114 (219)
T 3dh0_A 38 GMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLK---SEENKIPLPDNTVDFIFMAF 114 (219)
T ss_dssp TCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEE---CBTTBCSSCSSCEEEEEEES
T ss_pred CCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe---cccccCCCCCCCeeEEEeeh
Confidence 568999999999999999876300117899999989999887763 2 23333 22222 44 8899999999
Q ss_pred ccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh-------------HHHHHHHHHHHhCCCeeEEeecCCCCCCcceEE
Q 006905 541 VFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV-------------DELVKVKRIIDALKWQSQIVDHEDGPLEREKLL 607 (626)
Q Consensus 541 ~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~-------------~~~~~~~~~~~~l~w~~~~~~~e~~~~~~e~~l 607 (626)
++.+.. +...+|.|+.|+|||||.+++.+.. -....+.++++...++......-. ....++
T Consensus 115 ~l~~~~---~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~---~~~~~~ 188 (219)
T 3dh0_A 115 TFHELS---EPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEVG---KYCFGV 188 (219)
T ss_dssp CGGGCS---SHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEET---TTEEEE
T ss_pred hhhhcC---CHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEeeC---CceEEE
Confidence 999886 5689999999999999999998521 126788899999999866432221 246778
Q ss_pred EEEec
Q 006905 608 FAVKL 612 (626)
Q Consensus 608 ~~~K~ 612 (626)
+++|+
T Consensus 189 ~~~k~ 193 (219)
T 3dh0_A 189 YAMIV 193 (219)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 88875
No 130
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.05 E-value=1.4e-09 Score=106.32 Aligned_cols=106 Identities=11% Similarity=-0.103 Sum_probs=75.9
Q ss_pred HHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCC--eEEEEcccccCCCCCCC
Q 006905 200 DIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVP--ALIGVLAAERLPYPSRA 275 (626)
Q Consensus 200 ~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~--~~~~v~d~~~Lpf~d~s 275 (626)
.+.+.+.... +.+|||+|||+|.++..++++ .|+++|+++.++..+. +.+...+++ +.+..+|..........
T Consensus 46 ~~l~~l~~~~--~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~-~~~~~~g~~~~v~~~~~d~~~~~~~~~~ 122 (204)
T 3njr_A 46 LTLAALAPRR--GELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQ-KNIDTYGLSPRMRAVQGTAPAALADLPL 122 (204)
T ss_dssp HHHHHHCCCT--TCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHTTCTTTEEEEESCTTGGGTTSCC
T ss_pred HHHHhcCCCC--CCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHH-HHHHHcCCCCCEEEEeCchhhhcccCCC
Confidence 3444444433 458999999999999999886 6788888775554333 233344554 77777786663223357
Q ss_pred eeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 276 FDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 276 FDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
||+|++...+ +.. ++.++.++|||||.+++...
T Consensus 123 ~D~v~~~~~~-----~~~-~l~~~~~~LkpgG~lv~~~~ 155 (204)
T 3njr_A 123 PEAVFIGGGG-----SQA-LYDRLWEWLAPGTRIVANAV 155 (204)
T ss_dssp CSEEEECSCC-----CHH-HHHHHHHHSCTTCEEEEEEC
T ss_pred CCEEEECCcc-----cHH-HHHHHHHhcCCCcEEEEEec
Confidence 9999987744 345 99999999999999999864
No 131
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.05 E-value=1.2e-09 Score=110.45 Aligned_cols=122 Identities=17% Similarity=0.115 Sum_probs=82.9
Q ss_pred CCCcHHHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCCC--eEEEEc
Q 006905 190 FPNGADAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGVP--ALIGVL 264 (626)
Q Consensus 190 F~~ga~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~~--~~~~v~ 264 (626)
|..+.+.. .+..++... .++.+|||+|||+|.++..++++ .++++|+++..+..+..+ +...+.. +.+...
T Consensus 31 ~~~~~d~~--ll~~~~~~~-~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n-~~~~~~~~~v~~~~~ 106 (259)
T 3lpm_A 31 FSFSIDAV--LLAKFSYLP-IRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRS-VAYNQLEDQIEIIEY 106 (259)
T ss_dssp BCCCHHHH--HHHHHCCCC-SSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHH-HHHTTCTTTEEEECS
T ss_pred ccCcHHHH--HHHHHhcCC-CCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHH-HHHCCCcccEEEEEC
Confidence 44455544 345555433 03458999999999999999886 578888877555443333 3334543 677778
Q ss_pred ccccCC--CCCCCeeEEEeccccccc----c---------------ccHHHHHHHHHhcccCCeEEEEEeCC
Q 006905 265 AAERLP--YPSRAFDMAHCSRCLIPW----N---------------QFGGIYLIEVDRVLRPGGYWILSGPP 315 (626)
Q Consensus 265 d~~~Lp--f~d~sFDlV~~~~~l~h~----~---------------~~~~~~L~Ei~RvLKPGG~lvis~pp 315 (626)
|...++ +++++||+|+++..+.+. . .....++.++.++|||||.|++..++
T Consensus 107 D~~~~~~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 178 (259)
T 3lpm_A 107 DLKKITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP 178 (259)
T ss_dssp CGGGGGGTSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred cHHHhhhhhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH
Confidence 876665 567899999998655322 0 11256899999999999999997653
No 132
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.05 E-value=1e-09 Score=106.96 Aligned_cols=149 Identities=14% Similarity=0.098 Sum_probs=101.6
Q ss_pred hhchhhhHHHHHHHHHHHH------------hhhhcCCCCCceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHH
Q 006905 441 EIFQQNSELWKKRLSYYKT------------MNNQLGQSGRYRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLG 508 (626)
Q Consensus 441 ~~f~~d~~~w~~~v~~y~~------------~~~~~~~~~~~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~ 508 (626)
+.|..+...|......|.. ++..+.....-.+|||+|||.|.++..|.. +|+.+|.++.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~------~v~~~D~s~~--- 97 (215)
T 2zfu_A 27 RLFQEDPEAFLLYHRGFQSQVKKWPLQPVDRIARDLRQRPASLVVADFGCGDCRLASSIRN------PVHCFDLASL--- 97 (215)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHTSCTTSCEEEETCTTCHHHHHCCS------CEEEEESSCS---
T ss_pred HHHHHhHHHHHHHHHHHHhhhcccchhHHHHHHHHHhccCCCCeEEEECCcCCHHHHHhhc------cEEEEeCCCC---
Confidence 4566677777765555543 222222112346799999999999999852 4667777744
Q ss_pred HHHHhcccceeccccccCCCCC-CccceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcChH---HHHHHHHHH
Q 006905 509 VIYERGLVGTYTNWCEAMSTYP-RTYDLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDVD---ELVKVKRII 584 (626)
Q Consensus 509 ~~~~rgli~~~~~~~e~~~~yp-~t~Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~~---~~~~~~~~~ 584 (626)
. +.+...-.+.+ ++| ++||+|.+..++. . -+...+|.|+.|+|||||.+++.+... ....+..++
T Consensus 98 -----~-~~~~~~d~~~~-~~~~~~fD~v~~~~~l~-~---~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l 166 (215)
T 2zfu_A 98 -----D-PRVTVCDMAQV-PLEDESVDVAVFCLSLM-G---TNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAV 166 (215)
T ss_dssp -----S-TTEEESCTTSC-SCCTTCEEEEEEESCCC-S---SCHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHH
T ss_pred -----C-ceEEEeccccC-CCCCCCEeEEEEehhcc-c---cCHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHH
Confidence 1 22222112222 244 8999999998885 2 367899999999999999999987654 467888889
Q ss_pred HhCCCeeEEeecCCCCCCcceEEEEEec
Q 006905 585 DALKWQSQIVDHEDGPLEREKLLFAVKL 612 (626)
Q Consensus 585 ~~l~w~~~~~~~e~~~~~~e~~l~~~K~ 612 (626)
+...++....+...+ .-.+++++|.
T Consensus 167 ~~~Gf~~~~~~~~~~---~~~~~~~~k~ 191 (215)
T 2zfu_A 167 TKLGFKIVSKDLTNS---HFFLFDFQKT 191 (215)
T ss_dssp HHTTEEEEEEECCST---TCEEEEEEEC
T ss_pred HHCCCEEEEEecCCC---eEEEEEEEec
Confidence 988888765544322 3478888886
No 133
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.05 E-value=4.9e-08 Score=104.61 Aligned_cols=112 Identities=15% Similarity=0.133 Sum_probs=77.3
Q ss_pred eeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHHHh----ccc---ceeccccccCCCCC-Cccceeeecc
Q 006905 471 RNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIYER----GLV---GTYTNWCEAMSTYP-RTYDLIHADS 540 (626)
Q Consensus 471 r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~r----gli---~~~~~~~e~~~~yp-~t~Dlih~~~ 540 (626)
.+|||+|||+|.++..|++. +. .|+.+|.++.+++.+.++ |+- .+--.+...+..+| .+||+|.++.
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p~~---~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~~~fD~Ii~np 300 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNPQA---KVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNP 300 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTC---EEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCTTCEEEEEECC
T ss_pred CeEEEEeCcchHHHHHHHHHCCCC---EEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCCCCeeEEEECC
Confidence 68999999999999999887 34 789999998899877664 321 12001223334456 7999999998
Q ss_pred ccccCC--CCCCHHHHHHHhhhhccCCcEEEEEcCh--HHHHHHHHHHH
Q 006905 541 VFSLYK--DRCETEDILLEMDRILRPEGGVIFRDDV--DELVKVKRIID 585 (626)
Q Consensus 541 ~f~~~~--~~c~~~~~l~E~dRiLRPgG~~i~~d~~--~~~~~~~~~~~ 585 (626)
.|.... .+-....+|.++.|+|||||.+++.... .....++++..
T Consensus 301 pfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~~~~l~~~fg 349 (375)
T 4dcm_A 301 PFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFG 349 (375)
T ss_dssp CC-------CCHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHHHHHHHS
T ss_pred CcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCcCHHHHHHHhcC
Confidence 887532 2223346899999999999999996433 34455555544
No 134
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.05 E-value=3e-10 Score=117.79 Aligned_cols=101 Identities=13% Similarity=0.132 Sum_probs=80.6
Q ss_pred CceeEEeccCchhhHhhhhhCC-CeEEEEeccCccCcccHHHHHHh----cccceeccccccCCCCCCccceeeeccccc
Q 006905 469 RYRNILDMNAHLGGFAAALIDF-PVWVMNVVPAEAKINTLGVIYER----GLVGTYTNWCEAMSTYPRTYDLIHADSVFS 543 (626)
Q Consensus 469 ~~r~vlD~g~g~G~faa~l~~~-~v~~mnv~~~~~~~~~l~~~~~r----gli~~~~~~~e~~~~yp~t~Dlih~~~~f~ 543 (626)
.-.+|||+|||.|.++..|++. +. +|+.+|.++.+++.+.++ |+...+.-.+..+..+|.+||+|.+..+|.
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~~~~~l~ 166 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVERFDV---NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRIVSIEAFE 166 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCSEEEEESCGG
T ss_pred CcCEEEEEcccchHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCcCEEEEeChHH
Confidence 3458999999999999999887 65 899999999999998887 432211212344555679999999999999
Q ss_pred cCCCCCCHHHHHHHhhhhccCCcEEEEEcC
Q 006905 544 LYKDRCETEDILLEMDRILRPEGGVIFRDD 573 (626)
Q Consensus 544 ~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~ 573 (626)
+... -+...+|.|+.|+|||||.+++.+.
T Consensus 167 ~~~~-~~~~~~l~~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 167 HFGH-ENYDDFFKRCFNIMPADGRMTVQSS 195 (318)
T ss_dssp GTCG-GGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred hcCH-HHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 8753 3678999999999999999999753
No 135
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.04 E-value=4.8e-10 Score=110.39 Aligned_cols=116 Identities=14% Similarity=0.085 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHhhhhcCCCCCceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc-cceeccccccCC
Q 006905 449 LWKKRLSYYKTMNNQLGQSGRYRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL-VGTYTNWCEAMS 527 (626)
Q Consensus 449 ~w~~~v~~y~~~~~~~~~~~~~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl-i~~~~~~~e~~~ 527 (626)
.|......+..++..... .-.+|||+|||.|.++..|++.+. +|+.+|.++.+++.+.++.- +...+ ..+.
T Consensus 22 ~~~~~~~~~~~~l~~~~~--~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~---~d~~ 93 (239)
T 3bxo_A 22 DYAAEASDIADLVRSRTP--EASSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRLPDATLHQ---GDMR 93 (239)
T ss_dssp CHHHHHHHHHHHHHHHCT--TCCEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHCTTCEEEE---CCTT
T ss_pred hHHHHHHHHHHHHHHhcC--CCCeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhCCCCEEEE---CCHH
Confidence 455555555555443222 246899999999999999998754 78999999999999988742 23333 2333
Q ss_pred CC--CCccceeee-ccccccCCCCCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 528 TY--PRTYDLIHA-DSVFSLYKDRCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 528 ~y--p~t~Dlih~-~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
.+ +.+||+|.| ..+|.+..+.-+...+|.++.|+|||||.+++.+
T Consensus 94 ~~~~~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 94 DFRLGRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp TCCCSSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred HcccCCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 33 589999995 4488877654466789999999999999999973
No 136
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.04 E-value=1.1e-09 Score=115.62 Aligned_cols=112 Identities=13% Similarity=0.131 Sum_probs=81.8
Q ss_pred HHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccccCC
Q 006905 196 AYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAERLP 270 (626)
Q Consensus 196 ~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~Lp 270 (626)
.|.+.|.+.+.... +.+|||||||+|.++..+++. .++++|+++ ++..+ .+.+...+. .+.+..+|...++
T Consensus 51 ~~~~~i~~~~~~~~--~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a-~~~~~~~~~~~~i~~~~~d~~~~~ 126 (340)
T 2fyt_A 51 SYRDFIYQNPHIFK--DKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQA-MDIIRLNKLEDTITLIKGKIEEVH 126 (340)
T ss_dssp HHHHHHHHCGGGTT--TCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHH-HHHHHHTTCTTTEEEEESCTTTSC
T ss_pred HHHHHHHhhhhhcC--CCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHH-HHHHHHcCCCCcEEEEEeeHHHhc
Confidence 34455555554433 458999999999999999886 588999985 55433 334444554 4778888888889
Q ss_pred CCCCCeeEEEeccccc--cccccHHHHHHHHHhcccCCeEEEE
Q 006905 271 YPSRAFDMAHCSRCLI--PWNQFGGIYLIEVDRVLRPGGYWIL 311 (626)
Q Consensus 271 f~d~sFDlV~~~~~l~--h~~~~~~~~L~Ei~RvLKPGG~lvi 311 (626)
+++++||+|++..... +.......++.++.|+|||||.++.
T Consensus 127 ~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 127 LPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp CSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEES
T ss_pred CCCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEEc
Confidence 8888999999976321 2233457899999999999999984
No 137
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.04 E-value=2.7e-10 Score=111.17 Aligned_cols=121 Identities=10% Similarity=0.078 Sum_probs=87.7
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhccc---------------ceeccccccCCCCC----
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGLV---------------GTYTNWCEAMSTYP---- 530 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgli---------------~~~~~~~e~~~~yp---- 530 (626)
-.+|||+|||.|.++.+|++++. +|+++|.++.|++.+.++.-. ..+.-.+.++..+|
T Consensus 23 ~~~vLD~GCG~G~~~~~la~~g~---~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~ 99 (203)
T 1pjz_A 23 GARVLVPLCGKSQDMSWLSGQGY---HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDI 99 (203)
T ss_dssp TCEEEETTTCCSHHHHHHHHHCC---EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHH
T ss_pred CCEEEEeCCCCcHhHHHHHHCCC---eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccC
Confidence 45799999999999999999875 899999999999999987310 11112245555555
Q ss_pred CccceeeeccccccCCCCCCHHHHHHHhhhhccCCcE-EEEE-cCh----------HHHHHHHHHHHhCCCeeEEee
Q 006905 531 RTYDLIHADSVFSLYKDRCETEDILLEMDRILRPEGG-VIFR-DDV----------DELVKVKRIIDALKWQSQIVD 595 (626)
Q Consensus 531 ~t~Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~-~i~~-d~~----------~~~~~~~~~~~~l~w~~~~~~ 595 (626)
.+||+|.+..+|.+... .+...++.||.|+|||||+ +++. +-. -..+.+++++.. .|++....
T Consensus 100 ~~fD~v~~~~~l~~l~~-~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~~~~ 174 (203)
T 1pjz_A 100 GHCAAFYDRAAMIALPA-DMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVTKVG 174 (203)
T ss_dssp HSEEEEEEESCGGGSCH-HHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEEEEE
T ss_pred CCEEEEEECcchhhCCH-HHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEEEec
Confidence 58999999888887653 3456799999999999998 3332 211 024567777766 67765443
No 138
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.04 E-value=2.7e-10 Score=113.77 Aligned_cols=97 Identities=12% Similarity=0.058 Sum_probs=76.1
Q ss_pred ceeEEeccCchhhHhhhhhCC-CeEEEEeccCccCcccHHHHHHh----cc---cceeccccccCCCCCCccceeeeccc
Q 006905 470 YRNILDMNAHLGGFAAALIDF-PVWVMNVVPAEAKINTLGVIYER----GL---VGTYTNWCEAMSTYPRTYDLIHADSV 541 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~-~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~~~~e~~~~yp~t~Dlih~~~~ 541 (626)
-.+|||+|||.|.++..|++. +. +|+.+|.++.+++.+.++ |+ +.+.+.-.+.+.. +.+||+|+|..+
T Consensus 37 ~~~VLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~V~~~~~ 112 (256)
T 1nkv_A 37 GTRILDLGSGSGEMLCTWARDHGI---TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKCDVAACVGA 112 (256)
T ss_dssp TCEEEEETCTTCHHHHHHHHHTCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCEEEEEEESC
T ss_pred CCEEEEECCCCCHHHHHHHHhcCC---eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCCCEEEECCC
Confidence 468999999999999999875 44 789999999999988765 43 3333321122222 589999999999
Q ss_pred cccCCCCCCHHHHHHHhhhhccCCcEEEEEcC
Q 006905 542 FSLYKDRCETEDILLEMDRILRPEGGVIFRDD 573 (626)
Q Consensus 542 f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~ 573 (626)
+.+.. +...+|.|+.|+|||||++++.+.
T Consensus 113 ~~~~~---~~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 113 TWIAG---GFAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp GGGTS---SSHHHHHHHTTSEEEEEEEEEEEE
T ss_pred hHhcC---CHHHHHHHHHHHcCCCeEEEEecC
Confidence 88776 458999999999999999999863
No 139
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.04 E-value=1.5e-09 Score=108.37 Aligned_cols=160 Identities=14% Similarity=0.085 Sum_probs=105.2
Q ss_pred hhHHHHHHHHHHHHhhhhcCCCCCceeEEeccCchhhHhhhhh--CCCeEEEEeccCccCcccHHHHHHh----cc--cc
Q 006905 446 NSELWKKRLSYYKTMNNQLGQSGRYRNILDMNAHLGGFAAALI--DFPVWVMNVVPAEAKINTLGVIYER----GL--VG 517 (626)
Q Consensus 446 d~~~w~~~v~~y~~~~~~~~~~~~~r~vlD~g~g~G~faa~l~--~~~v~~mnv~~~~~~~~~l~~~~~r----gl--i~ 517 (626)
....|.+++-....++..+.- ..-.+|||+|||.|.++..|+ ..+. .|+.+|.++.++.++.++ |+ +.
T Consensus 48 ~~~~~~~~~~d~l~~~~~~~~-~~~~~vLDiG~G~G~~~~~la~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~ 123 (240)
T 1xdz_A 48 KKEVYLKHFYDSITAAFYVDF-NQVNTICDVGAGAGFPSLPIKICFPHL---HVTIVDSLNKRITFLEKLSEALQLENTT 123 (240)
T ss_dssp HHHHHHHTHHHHHGGGGTSCG-GGCCEEEEECSSSCTTHHHHHHHCTTC---EEEEEESCHHHHHHHHHHHHHHTCSSEE
T ss_pred HHHHHHHHHHHHHhHHHhccc-CCCCEEEEecCCCCHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHcCCCCEE
Confidence 345666665543333322221 224589999999999999988 4444 789999998899887764 44 44
Q ss_pred eeccccccCCC---CCCccceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcC---hHHHHHHHHHHHhCCCee
Q 006905 518 TYTNWCEAMST---YPRTYDLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDD---VDELVKVKRIIDALKWQS 591 (626)
Q Consensus 518 ~~~~~~e~~~~---yp~t~Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~---~~~~~~~~~~~~~l~w~~ 591 (626)
+++.-.+.+.. .+.+||+|.|..+ .++..++.++.|+|||||.+++.+. .+.+..+.+.++...+..
T Consensus 124 ~~~~d~~~~~~~~~~~~~fD~V~~~~~-------~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~ 196 (240)
T 1xdz_A 124 FCHDRAETFGQRKDVRESYDIVTARAV-------ARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGEL 196 (240)
T ss_dssp EEESCHHHHTTCTTTTTCEEEEEEECC-------SCHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEE
T ss_pred EEeccHHHhcccccccCCccEEEEecc-------CCHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeE
Confidence 55432333332 2479999999652 4678999999999999999999764 345666777778888876
Q ss_pred EEeec--CCCCCCcceEEEEEecccCC
Q 006905 592 QIVDH--EDGPLEREKLLFAVKLYWTA 616 (626)
Q Consensus 592 ~~~~~--e~~~~~~e~~l~~~K~~w~~ 616 (626)
..... -......-.+++++|.=.++
T Consensus 197 ~~~~~~~~~~~~~~~~l~~~~k~~~~~ 223 (240)
T 1xdz_A 197 ENIHSFKLPIEESDRNIMVIRKIKNTP 223 (240)
T ss_dssp EEEEEEECTTTCCEEEEEEEEECSCCC
T ss_pred eEEEEEecCCCCCceEEEEEEecCCCC
Confidence 53221 11112345677777764443
No 140
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.04 E-value=2.5e-10 Score=112.86 Aligned_cols=116 Identities=14% Similarity=0.092 Sum_probs=90.5
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc---cceeccccccCCCCC-CccceeeeccccccC
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL---VGTYTNWCEAMSTYP-RTYDLIHADSVFSLY 545 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl---i~~~~~~~e~~~~yp-~t~Dlih~~~~f~~~ 545 (626)
-.+|||+|||.|.++..|++.+. +|+.+|.++.+++.+.+++. +..++.-.+.++ +| .+||+|.+..+|.+.
T Consensus 54 ~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~~ 129 (242)
T 3l8d_A 54 EAEVLDVGCGDGYGTYKLSRTGY---KAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLP-FENEQFEAIMAINSLEWT 129 (242)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCS-SCTTCEEEEEEESCTTSS
T ss_pred CCeEEEEcCCCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhcccCCceEEEcchhcCC-CCCCCccEEEEcChHhhc
Confidence 34899999999999999999976 78999999999999999853 223332122222 33 899999999999988
Q ss_pred CCCCCHHHHHHHhhhhccCCcEEEEEcCh----------------------HHHHHHHHHHHhCCCeeE
Q 006905 546 KDRCETEDILLEMDRILRPEGGVIFRDDV----------------------DELVKVKRIIDALKWQSQ 592 (626)
Q Consensus 546 ~~~c~~~~~l~E~dRiLRPgG~~i~~d~~----------------------~~~~~~~~~~~~l~w~~~ 592 (626)
. +...+|.++.|+|||||.+++.+.. -....+++++....+++.
T Consensus 130 ~---~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 195 (242)
T 3l8d_A 130 E---EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVV 195 (242)
T ss_dssp S---CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEE
T ss_pred c---CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEE
Confidence 5 5589999999999999999998521 113567888888888765
No 141
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.03 E-value=9e-10 Score=109.91 Aligned_cols=96 Identities=8% Similarity=0.035 Sum_probs=73.2
Q ss_pred CCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCC-CeEEEEcccccCCCC---CCCeeEEEecc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGV-PALIGVLAAERLPYP---SRAFDMAHCSR 283 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~-~~~~~v~d~~~Lpf~---d~sFDlV~~~~ 283 (626)
+.+|||||||+|.++..|+.. .|+++|+++.++..+.. .+...++ .+.+..+|...++++ +++||+|+|..
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~ 149 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEK-LSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARA 149 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHH-HHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEEC
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHH-HHHHcCCCCEEEEeccHHHhcccccccCCccEEEEec
Confidence 568999999999998888842 68889988765544333 3333454 477778887777764 67899999966
Q ss_pred ccccccccHHHHHHHHHhcccCCeEEEEEe
Q 006905 284 CLIPWNQFGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 284 ~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
. .+...++.++.++|||||+|++..
T Consensus 150 ~-----~~~~~~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 150 V-----ARLSVLSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp C-----SCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred c-----CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 2 346889999999999999999873
No 142
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.03 E-value=4.5e-10 Score=112.65 Aligned_cols=102 Identities=19% Similarity=0.107 Sum_probs=73.7
Q ss_pred CCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHH-----HcCC-CeEEEEccccc-CC--CCCCCeeE
Q 006905 212 IRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFAL-----ERGV-PALIGVLAAER-LP--YPSRAFDM 278 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~-----erg~-~~~~~v~d~~~-Lp--f~d~sFDl 278 (626)
..+|||||||+|.++..|++. .++++|+++.++..+..+... ..+. ++.+..+|+.. ++ +++++||.
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D~ 126 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLTK 126 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEEE
T ss_pred CCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCeeE
Confidence 458999999999999999875 588999988666544433221 1233 46778888765 66 78899999
Q ss_pred EEecccccccccc--------HHHHHHHHHhcccCCeEEEEEeC
Q 006905 279 AHCSRCLIPWNQF--------GGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 279 V~~~~~l~h~~~~--------~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
|++...- +|... ...+|.++.|+|||||.|++...
T Consensus 127 v~~~~~d-p~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 127 MFFLFPD-PHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp EEEESCC------------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred EEEeCCC-chhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 9986543 44321 14799999999999999999753
No 143
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.03 E-value=1.7e-10 Score=124.56 Aligned_cols=144 Identities=13% Similarity=0.135 Sum_probs=109.2
Q ss_pred chhhhHHHHHHHHHHHHh-hhhcCCCCCceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcccceec-
Q 006905 443 FQQNSELWKKRLSYYKTM-NNQLGQSGRYRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGLVGTYT- 520 (626)
Q Consensus 443 f~~d~~~w~~~v~~y~~~-~~~~~~~~~~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgli~~~~- 520 (626)
+......|..+...+... +..+.. ..-.+|||+|||.|.++..|++.+. +|+.+|.++++++.+.++|+-....
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~VLDiGcG~G~~~~~l~~~g~---~v~gvD~s~~~~~~a~~~~~~~~~~~ 156 (416)
T 4e2x_A 81 HSSGSSVMREHFAMLARDFLATELT-GPDPFIVEIGCNDGIMLRTIQEAGV---RHLGFEPSSGVAAKAREKGIRVRTDF 156 (416)
T ss_dssp CGGGCHHHHHHHHHHHHHHHHTTTC-SSSCEEEEETCTTTTTHHHHHHTTC---EEEEECCCHHHHHHHHTTTCCEECSC
T ss_pred cCcCCHHHHHHHHHHHHHHHHHhCC-CCCCEEEEecCCCCHHHHHHHHcCC---cEEEECCCHHHHHHHHHcCCCcceee
Confidence 344557788887776654 333443 4456899999999999999999876 8999999999999999997633221
Q ss_pred ---cccccCCCCC-CccceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh--------------------HH
Q 006905 521 ---NWCEAMSTYP-RTYDLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV--------------------DE 576 (626)
Q Consensus 521 ---~~~e~~~~yp-~t~Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~--------------------~~ 576 (626)
+-.+.+ .++ ++||+|.+..+|.|.. +...+|.|+.|+|||||++++.... -.
T Consensus 157 ~~~~~~~~l-~~~~~~fD~I~~~~vl~h~~---d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s 232 (416)
T 4e2x_A 157 FEKATADDV-RRTEGPANVIYAANTLCHIP---YVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFS 232 (416)
T ss_dssp CSHHHHHHH-HHHHCCEEEEEEESCGGGCT---THHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECC
T ss_pred echhhHhhc-ccCCCCEEEEEECChHHhcC---CHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCC
Confidence 111111 133 8999999999999997 6799999999999999999997432 02
Q ss_pred HHHHHHHHHhCCCeeEEe
Q 006905 577 LVKVKRIIDALKWQSQIV 594 (626)
Q Consensus 577 ~~~~~~~~~~l~w~~~~~ 594 (626)
...++.++++-.++..-+
T Consensus 233 ~~~l~~ll~~aGf~~~~~ 250 (416)
T 4e2x_A 233 ATSVQGMAQRCGFELVDV 250 (416)
T ss_dssp HHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHHHcCCEEEEE
Confidence 467888888888876543
No 144
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.03 E-value=3.2e-10 Score=115.56 Aligned_cols=107 Identities=15% Similarity=0.174 Sum_probs=83.9
Q ss_pred HhhhhcCCCCCceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc---cceeccccccCCCCC-
Q 006905 459 TMNNQLGQSGRYRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL---VGTYTNWCEAMSTYP- 530 (626)
Q Consensus 459 ~~~~~~~~~~~~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~~~~e~~~~yp- 530 (626)
.++..+.. . -.+|||+|||.|.++..|++.+. +|+.+|.++.+++.+.++ |+ +.+++.-.+.+..++
T Consensus 60 ~~l~~~~~-~-~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 134 (285)
T 4htf_A 60 RVLAEMGP-Q-KLRVLDAGGGEGQTAIKMAERGH---QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLE 134 (285)
T ss_dssp HHHHHTCS-S-CCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCS
T ss_pred HHHHhcCC-C-CCEEEEeCCcchHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcC
Confidence 34444444 2 36899999999999999999876 799999999999998886 33 334443233444344
Q ss_pred CccceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcC
Q 006905 531 RTYDLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDD 573 (626)
Q Consensus 531 ~t~Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~ 573 (626)
.+||+|.+..++.+.. +...+|.|+.|+|||||.+++.+.
T Consensus 135 ~~fD~v~~~~~l~~~~---~~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 135 TPVDLILFHAVLEWVA---DPRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp SCEEEEEEESCGGGCS---CHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCceEEEECchhhccc---CHHHHHHHHHHHcCCCeEEEEEEe
Confidence 9999999999999886 458999999999999999999763
No 145
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.03 E-value=1.3e-09 Score=113.16 Aligned_cols=97 Identities=11% Similarity=0.029 Sum_probs=72.3
Q ss_pred CCCEEEEeCCCCchHHHHH-hh---CCcEEEeCCccchHHHHHHHHHHcCC-CeEEEEcccccCCCCCCCeeEEEecccc
Q 006905 211 SIRTAIDTGCGVASWGAYL-LS---RNIITMSFAPRDTHEAQVQFALERGV-PALIGVLAAERLPYPSRAFDMAHCSRCL 285 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~L-a~---~~V~avdis~~dls~a~i~~A~erg~-~~~~~v~d~~~Lpf~d~sFDlV~~~~~l 285 (626)
++.+|||||||+|.+++.+ ++ ..|+++|+++.++..++...+ +.|. .+.+..+|+..+| +++||+|++...
T Consensus 122 ~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~-~~gl~~v~~v~gDa~~l~--d~~FDvV~~~a~- 197 (298)
T 3fpf_A 122 RGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIE-GLGVDGVNVITGDETVID--GLEFDVLMVAAL- 197 (298)
T ss_dssp TTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHH-HHTCCSEEEEESCGGGGG--GCCCSEEEECTT-
T ss_pred CcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHH-hcCCCCeEEEECchhhCC--CCCcCEEEECCC-
Confidence 3569999999999776543 33 268888888866655444333 3344 5778888887775 789999998653
Q ss_pred ccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 286 IPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 286 ~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
..+...++.++.|+|||||.|++...
T Consensus 198 ---~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 198 ---AEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp ---CSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred ---ccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 34568999999999999999999753
No 146
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.03 E-value=3.1e-10 Score=122.07 Aligned_cols=92 Identities=11% Similarity=0.118 Sum_probs=71.8
Q ss_pred CCEEEEeCCC------CchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCC------CC
Q 006905 212 IRTAIDTGCG------VASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYP------SR 274 (626)
Q Consensus 212 ~~~VLDIGCG------tG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~------d~ 274 (626)
..+||||||| +|..+..++++ .|+++|+++.+. .....+.+.++|...+||. ++
T Consensus 217 ~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~~~rI~fv~GDa~dlpf~~~l~~~d~ 287 (419)
T 3sso_A 217 QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VDELRIRTIQGDQNDAEFLDRIARRYG 287 (419)
T ss_dssp CCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GCBTTEEEEECCTTCHHHHHHHHHHHC
T ss_pred CCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hcCCCcEEEEecccccchhhhhhcccC
Confidence 5689999999 66555555542 699999988652 1334678889999888887 78
Q ss_pred CeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 275 AFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 275 sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+||+|+|..+ |+..+...+|+++.|+|||||+|++...
T Consensus 288 sFDlVisdgs--H~~~d~~~aL~el~rvLKPGGvlVi~Dl 325 (419)
T 3sso_A 288 PFDIVIDDGS--HINAHVRTSFAALFPHVRPGGLYVIEDM 325 (419)
T ss_dssp CEEEEEECSC--CCHHHHHHHHHHHGGGEEEEEEEEEECG
T ss_pred CccEEEECCc--ccchhHHHHHHHHHHhcCCCeEEEEEec
Confidence 9999999754 3344568999999999999999999853
No 147
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.03 E-value=1e-09 Score=106.88 Aligned_cols=118 Identities=9% Similarity=-0.021 Sum_probs=81.4
Q ss_pred cHHHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCC-CeEEEEccccc
Q 006905 193 GADAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGV-PALIGVLAAER 268 (626)
Q Consensus 193 ga~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~-~~~~~v~d~~~ 268 (626)
..+...+.+.+.+... ..+.+|||+|||+|.++..++.+ .|+++|+++.++..+..+ +...++ .+.+...|...
T Consensus 37 ~~~~~~~~l~~~l~~~-~~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~-~~~~~~~~v~~~~~D~~~ 114 (202)
T 2fpo_A 37 TTDRVRETLFNWLAPV-IVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKN-LATLKAGNARVVNSNAMS 114 (202)
T ss_dssp -CHHHHHHHHHHHHHH-HTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHH-HHHTTCCSEEEECSCHHH
T ss_pred CHHHHHHHHHHHHHhh-cCCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHH-HHHcCCCcEEEEECCHHH
Confidence 3444555555555431 02458999999999999986665 588899888666544433 334454 56777777655
Q ss_pred -CCCCCCCeeEEEeccccccccccHHHHHHHHHh--cccCCeEEEEEeC
Q 006905 269 -LPYPSRAFDMAHCSRCLIPWNQFGGIYLIEVDR--VLRPGGYWILSGP 314 (626)
Q Consensus 269 -Lpf~d~sFDlV~~~~~l~h~~~~~~~~L~Ei~R--vLKPGG~lvis~p 314 (626)
++..+++||+|++...+ +. .....++.++.+ +|+|||.++++..
T Consensus 115 ~~~~~~~~fD~V~~~~p~-~~-~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 115 FLAQKGTPHNIVFVDPPF-RR-GLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp HHSSCCCCEEEEEECCSS-ST-TTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred HHhhcCCCCCEEEECCCC-CC-CcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 56667899999998765 33 334677888865 6999999999864
No 148
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.03 E-value=5.7e-10 Score=103.56 Aligned_cols=91 Identities=16% Similarity=0.155 Sum_probs=71.0
Q ss_pred CCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCC--------CCCCCeeE
Q 006905 212 IRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLP--------YPSRAFDM 278 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lp--------f~d~sFDl 278 (626)
+.+|||+|||+|.++..+++. .++++|+++ +... ..+.+...|...++ +++++||+
T Consensus 23 ~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~ 91 (180)
T 1ej0_A 23 GMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------VGVDFLQGDFRDELVMKALLERVGDSKVQV 91 (180)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------TTEEEEESCTTSHHHHHHHHHHHTTCCEEE
T ss_pred CCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------CcEEEEEcccccchhhhhhhccCCCCceeE
Confidence 458999999999999888764 588889877 4421 34667777877766 67789999
Q ss_pred EEeccccccccccH-----------HHHHHHHHhcccCCeEEEEEeC
Q 006905 279 AHCSRCLIPWNQFG-----------GIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 279 V~~~~~l~h~~~~~-----------~~~L~Ei~RvLKPGG~lvis~p 314 (626)
|+++.++++ .... ..++.++.++|||||.+++..+
T Consensus 92 i~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (180)
T 1ej0_A 92 VMSDMAPNM-SGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF 137 (180)
T ss_dssp EEECCCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEECCCccc-cCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 999887743 3322 5889999999999999999764
No 149
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.02 E-value=4e-10 Score=112.55 Aligned_cols=107 Identities=14% Similarity=0.161 Sum_probs=82.6
Q ss_pred HhhhhcCCCCCceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc---cceeccccccCCCCC-Cccc
Q 006905 459 TMNNQLGQSGRYRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL---VGTYTNWCEAMSTYP-RTYD 534 (626)
Q Consensus 459 ~~~~~~~~~~~~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl---i~~~~~~~e~~~~yp-~t~D 534 (626)
.++..+.. ..-.+|||+|||.|.++..|++.+.- +|+.+|.++.+++.+.++.- +.....=.+.+. +| .+||
T Consensus 35 ~l~~~~~~-~~~~~vLD~GcG~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~-~~~~~fD 110 (253)
T 3g5l_A 35 ELKKMLPD-FNQKTVLDLGCGFGWHCIYAAEHGAK--KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIA-IEPDAYN 110 (253)
T ss_dssp HHHTTCCC-CTTCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCC-CCTTCEE
T ss_pred HHHHhhhc-cCCCEEEEECCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCC-CCCCCeE
Confidence 33333443 44678999999999999999988642 78999999999999998853 223321122332 44 8999
Q ss_pred eeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 535 LIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 535 lih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
+|.+..+|.+.. +...+|.++.|+|||||.++++.
T Consensus 111 ~v~~~~~l~~~~---~~~~~l~~~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 111 VVLSSLALHYIA---SFDDICKKVYINLKSSGSFIFSV 145 (253)
T ss_dssp EEEEESCGGGCS---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEchhhhhhh---hHHHHHHHHHHHcCCCcEEEEEe
Confidence 999999999885 56899999999999999999973
No 150
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.02 E-value=4e-09 Score=107.54 Aligned_cols=116 Identities=16% Similarity=0.109 Sum_probs=79.4
Q ss_pred HHHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCC-CeEEEEccccc
Q 006905 194 ADAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGV-PALIGVLAAER 268 (626)
Q Consensus 194 a~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~-~~~~~v~d~~~ 268 (626)
....++.+.+.+. ....+|||+|||+|.++..++.. .++++|+++..+..+..+ +...++ .+.+..+|...
T Consensus 95 te~l~~~~l~~~~---~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n-~~~~~~~~v~~~~~d~~~ 170 (276)
T 2b3t_A 95 TECLVEQALARLP---EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRN-AQHLAIKNIHILQSDWFS 170 (276)
T ss_dssp HHHHHHHHHHHSC---SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHH-HHHHTCCSEEEECCSTTG
T ss_pred HHHHHHHHHHhcc---cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHH-HHHcCCCceEEEEcchhh
Confidence 4445555555553 23458999999999999998853 688888877655544333 333454 36677777544
Q ss_pred CCCCCCCeeEEEeccccccc-------------c-----------ccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 269 LPYPSRAFDMAHCSRCLIPW-------------N-----------QFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 269 Lpf~d~sFDlV~~~~~l~h~-------------~-----------~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
++++++||+|+++..++.. + .....++.++.++|||||++++..+
T Consensus 171 -~~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~ 239 (276)
T 2b3t_A 171 -ALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG 239 (276)
T ss_dssp -GGTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred -hcccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 2446789999998544322 1 1236788999999999999999853
No 151
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.02 E-value=2.4e-10 Score=113.64 Aligned_cols=123 Identities=19% Similarity=0.171 Sum_probs=92.8
Q ss_pred CceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc------cceeccccccCCCCC-Cccceeeeccc
Q 006905 469 RYRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL------VGTYTNWCEAMSTYP-RTYDLIHADSV 541 (626)
Q Consensus 469 ~~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl------i~~~~~~~e~~~~yp-~t~Dlih~~~~ 541 (626)
.-.+|||+|||.|.++..|++.. ..+|+.+|.++.+++.+.++.- +..+..-.+.+. ++ .+||+|.+..+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~ 155 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFT-PEPDSYDVIWIQWV 155 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCC-CCSSCEEEEEEESC
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcC-CCCCCEEEEEEcch
Confidence 35789999999999999999885 2378999999999999988753 222221112222 23 68999999999
Q ss_pred cccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh---------------HHHHHHHHHHHhCCCeeEEee
Q 006905 542 FSLYKDRCETEDILLEMDRILRPEGGVIFRDDV---------------DELVKVKRIIDALKWQSQIVD 595 (626)
Q Consensus 542 f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~---------------~~~~~~~~~~~~l~w~~~~~~ 595 (626)
+.+..+. .+..+|.++.|+|||||++++.+.. .....+++++....++.....
T Consensus 156 l~~~~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 223 (241)
T 2ex4_A 156 IGHLTDQ-HLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEE 223 (241)
T ss_dssp GGGSCHH-HHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEE
T ss_pred hhhCCHH-HHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEee
Confidence 9887642 2468999999999999999997632 136788888888888876543
No 152
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.02 E-value=2.3e-09 Score=111.61 Aligned_cols=113 Identities=17% Similarity=0.135 Sum_probs=79.9
Q ss_pred HHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccccCCCC
Q 006905 199 DDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAERLPYP 272 (626)
Q Consensus 199 ~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~Lpf~ 272 (626)
..+.+.+.....+..+|||||||+|.++..++++ .++++|++ ..+..+..... ..++ .+.+..+|....+++
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~~~ 230 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENAR-IQGVASRYHTIAGSAFEVDYG 230 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHH-HHTCGGGEEEEESCTTTSCCC
T ss_pred HHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHH-hcCCCcceEEEecccccCCCC
Confidence 3444444331123569999999999999999876 47777775 34433332222 2243 377888887777776
Q ss_pred CCCeeEEEeccccccccccH-HHHHHHHHhcccCCeEEEEEeC
Q 006905 273 SRAFDMAHCSRCLIPWNQFG-GIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 273 d~sFDlV~~~~~l~h~~~~~-~~~L~Ei~RvLKPGG~lvis~p 314 (626)
++ ||+|++..++++|.+.. ..+|+++.++|+|||++++..+
T Consensus 231 ~~-~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 272 (335)
T 2r3s_A 231 ND-YDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDF 272 (335)
T ss_dssp SC-EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CC-CcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEee
Confidence 55 99999999998886433 6899999999999999999764
No 153
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.01 E-value=1.2e-09 Score=112.49 Aligned_cols=101 Identities=12% Similarity=0.145 Sum_probs=71.7
Q ss_pred CCEEEEeCCCCch----HHHHHhhC--------CcEEEeCCccchHHHHHHHH--------------H-----H---cC-
Q 006905 212 IRTAIDTGCGVAS----WGAYLLSR--------NIITMSFAPRDTHEAQVQFA--------------L-----E---RG- 256 (626)
Q Consensus 212 ~~~VLDIGCGtG~----~a~~La~~--------~V~avdis~~dls~a~i~~A--------------~-----e---rg- 256 (626)
..+|||+|||+|. ++..|++. .|+++|+++.++..+....- + . .+
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 4589999999996 56556543 57888887755544332210 0 0 00
Q ss_pred --------CCeEEEEcccccCCCC-CCCeeEEEeccccccccccH-HHHHHHHHhcccCCeEEEEE
Q 006905 257 --------VPALIGVLAAERLPYP-SRAFDMAHCSRCLIPWNQFG-GIYLIEVDRVLRPGGYWILS 312 (626)
Q Consensus 257 --------~~~~~~v~d~~~Lpf~-d~sFDlV~~~~~l~h~~~~~-~~~L~Ei~RvLKPGG~lvis 312 (626)
..+.|...|....|++ .+.||+|+|.++++++.+.. ..++.++.++|+|||+|++.
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred eeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 1366777787666665 57899999999997775432 78999999999999999985
No 154
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.01 E-value=7.9e-10 Score=104.57 Aligned_cols=90 Identities=17% Similarity=0.104 Sum_probs=71.7
Q ss_pred CCCCCCEEEEeCCCCchHHHHHhhCCcEEEeCCccchHHHHHHHHHHcCC-CeEEEEcccccCCC---CCCCeeEEEecc
Q 006905 208 NDGSIRTAIDTGCGVASWGAYLLSRNIITMSFAPRDTHEAQVQFALERGV-PALIGVLAAERLPY---PSRAFDMAHCSR 283 (626)
Q Consensus 208 ~~~~~~~VLDIGCGtG~~a~~La~~~V~avdis~~dls~a~i~~A~erg~-~~~~~v~d~~~Lpf---~d~sFDlV~~~~ 283 (626)
.-+++.+|||||||. + . .|+++.+++.|+++.. .+.+.++|...+++ ++++||+|+|+.
T Consensus 9 g~~~g~~vL~~~~g~-----------v---~---vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~ 71 (176)
T 2ld4_A 9 GISAGQFVAVVWDKS-----------S---P---VEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGL 71 (176)
T ss_dssp TCCTTSEEEEEECTT-----------S---C---HHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECC
T ss_pred CCCCCCEEEEecCCc-----------e---e---eeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECC
Confidence 334567999999996 1 1 3778888888877632 46777888888887 889999999999
Q ss_pred ccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 284 CLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 284 ~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+++|...+...+|+++.|+|||||+|++..+
T Consensus 72 ~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 72 VPGSTTLHSAEILAEIARILRPGGCLFLKEP 102 (176)
T ss_dssp STTCCCCCCHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhhcccCHHHHHHHHHHHCCCCEEEEEEcc
Confidence 9976635569999999999999999999754
No 155
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.01 E-value=9.6e-10 Score=108.30 Aligned_cols=110 Identities=10% Similarity=-0.003 Sum_probs=76.7
Q ss_pred HHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCC
Q 006905 196 AYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPS 273 (626)
Q Consensus 196 ~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d 273 (626)
.....+.+.+...+ +.+|||||||+|.++..|++. .++++|+++..+..+... ....+ .+.+...|.......+
T Consensus 57 ~~~~~~~~~~~~~~--~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~-~~~~~-~v~~~~~d~~~~~~~~ 132 (231)
T 1vbf_A 57 NLGIFMLDELDLHK--GQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKL-LSYYN-NIKLILGDGTLGYEEE 132 (231)
T ss_dssp HHHHHHHHHTTCCT--TCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHH-HTTCS-SEEEEESCGGGCCGGG
T ss_pred HHHHHHHHhcCCCC--CCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHH-HhhcC-CeEEEECCcccccccC
Confidence 44555666664433 458999999999999999886 578888866433322211 11222 5677777766533346
Q ss_pred CCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCCC
Q 006905 274 RAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGPPI 316 (626)
Q Consensus 274 ~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~pp~ 316 (626)
++||+|++..+++|+. .++.++|||||.+++..++.
T Consensus 133 ~~fD~v~~~~~~~~~~-------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 133 KPYDRVVVWATAPTLL-------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp CCEEEEEESSBBSSCC-------HHHHHTEEEEEEEEEEECSS
T ss_pred CCccEEEECCcHHHHH-------HHHHHHcCCCcEEEEEEcCC
Confidence 7899999999886654 36899999999999987643
No 156
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.01 E-value=3e-09 Score=104.70 Aligned_cols=103 Identities=16% Similarity=0.028 Sum_probs=75.1
Q ss_pred CCCEEEEeCCC-CchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCCCeEEEEccccc-CCCCCCCeeEEEecccc
Q 006905 211 SIRTAIDTGCG-VASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAER-LPYPSRAFDMAHCSRCL 285 (626)
Q Consensus 211 ~~~~VLDIGCG-tG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~-Lpf~d~sFDlV~~~~~l 285 (626)
++.+|||+||| +|.++..+++. .++++|+++..+..+.. .+...+..+.+..+|... .++++++||+|+++..+
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~ 133 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARR-NIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPY 133 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHH-HHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCC
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHH-HHHHhCCCcEEEeCCchhhhhcccCceeEEEECCCC
Confidence 35689999999 99999988876 68888888765544333 334456677788777543 35667899999998766
Q ss_pred ccccc------------------cHHHHHHHHHhcccCCeEEEEEeC
Q 006905 286 IPWNQ------------------FGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 286 ~h~~~------------------~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
++... ....++.++.++|||||++++..+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 180 (230)
T 3evz_A 134 YDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLP 180 (230)
T ss_dssp C---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred cCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEec
Confidence 43221 126789999999999999999753
No 157
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.01 E-value=9.1e-10 Score=117.08 Aligned_cols=100 Identities=12% Similarity=0.131 Sum_probs=74.8
Q ss_pred CCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccccC--CCCCCCeeEEEecc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAERL--PYPSRAFDMAHCSR 283 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~L--pf~d~sFDlV~~~~ 283 (626)
..+|||||||+|.++..++++ .++++|+ +..+..+. +.+.+.+. .+.+..+|.... |++ ++||+|++..
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~~ 256 (363)
T 3dp7_A 180 PKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMR-KQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMSQ 256 (363)
T ss_dssp CSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHH-HHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEES
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHH-HHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEec
Confidence 568999999999999999874 4677776 43333222 22222333 477888887664 566 7899999999
Q ss_pred ccccccccH-HHHHHHHHhcccCCeEEEEEeC
Q 006905 284 CLIPWNQFG-GIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 284 ~l~h~~~~~-~~~L~Ei~RvLKPGG~lvis~p 314 (626)
++|+|.++. ..+|+++.|+|||||.+++...
T Consensus 257 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (363)
T 3dp7_A 257 FLDCFSEEEVISILTRVAQSIGKDSKVYIMET 288 (363)
T ss_dssp CSTTSCHHHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCcEEEEEee
Confidence 998887654 5889999999999999999764
No 158
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.01 E-value=7.2e-10 Score=114.60 Aligned_cols=138 Identities=9% Similarity=0.016 Sum_probs=100.1
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc-------cceeccccccCCC--CCCccceeeecc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL-------VGTYTNWCEAMST--YPRTYDLIHADS 540 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl-------i~~~~~~~e~~~~--yp~t~Dlih~~~ 540 (626)
-.+|||+|||.|.++..|+....-..+|+.+|.++.+++.+.++.- +.+++ ..+.. ++.+||+|.+..
T Consensus 119 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~~~~~~fD~v~~~~ 195 (305)
T 3ocj_A 119 GCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHR---QDAWKLDTREGYDLLTSNG 195 (305)
T ss_dssp TCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEE---CCGGGCCCCSCEEEEECCS
T ss_pred CCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEE---CchhcCCccCCeEEEEECC
Confidence 4579999999999999995221111378999999999998887643 33333 22333 349999999999
Q ss_pred ccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh---------------------------------------HHHHHHH
Q 006905 541 VFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV---------------------------------------DELVKVK 581 (626)
Q Consensus 541 ~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~---------------------------------------~~~~~~~ 581 (626)
++.+..+.-....+|.|+.|+|||||++++.+.. .....+.
T Consensus 196 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (305)
T 3ocj_A 196 LNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTR 275 (305)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHH
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHH
Confidence 9998876534445899999999999999998611 1367788
Q ss_pred HHHHhCCCeeEEeecCCCCCCcceEEEEEec
Q 006905 582 RIIDALKWQSQIVDHEDGPLEREKLLFAVKL 612 (626)
Q Consensus 582 ~~~~~l~w~~~~~~~e~~~~~~e~~l~~~K~ 612 (626)
++++.-.++...+... ....-.+++++|+
T Consensus 276 ~~l~~aGF~~v~~~~~--~~~~~~~v~a~Kp 304 (305)
T 3ocj_A 276 AQLEEAGFTDLRFEDD--RARLFPTVIARKP 304 (305)
T ss_dssp HHHHHTTCEEEEEECC--TTSSSCEEEEECC
T ss_pred HHHHHCCCEEEEEEcc--cCceeeEEEEecC
Confidence 8899888987654432 2234567888885
No 159
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.00 E-value=1.5e-09 Score=111.33 Aligned_cols=116 Identities=10% Similarity=0.043 Sum_probs=79.3
Q ss_pred HHHHHHHHhhccCCCCCCEEEEeCCCC---chHHHHHhh----CCcEEEeCCccchHHHHHHHHHHcCCCeEEEEccccc
Q 006905 196 AYIDDIGKLINLNDGSIRTAIDTGCGV---ASWGAYLLS----RNIITMSFAPRDTHEAQVQFALERGVPALIGVLAAER 268 (626)
Q Consensus 196 ~yi~~L~~ll~l~~~~~~~VLDIGCGt---G~~a~~La~----~~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~ 268 (626)
.+++++.+.+... ....+|||||||+ |.++..+.+ ..|+++|+++.++..++.... ....+.+..+|...
T Consensus 63 ~~~~~~~~~l~~~-~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~--~~~~v~~~~~D~~~ 139 (274)
T 2qe6_A 63 KVLVRGVRFLAGE-AGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLA--KDPNTAVFTADVRD 139 (274)
T ss_dssp HHHHHHHHHHHTT-TCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHT--TCTTEEEEECCTTC
T ss_pred HHHHHHHHHHhhc-cCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcC--CCCCeEEEEeeCCC
Confidence 3444444444311 2246899999999 988766654 368889887765554333221 12346777777643
Q ss_pred CC-----------CCCCCeeEEEecccccccccc-HHHHHHHHHhcccCCeEEEEEeC
Q 006905 269 LP-----------YPSRAFDMAHCSRCLIPWNQF-GGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 269 Lp-----------f~d~sFDlV~~~~~l~h~~~~-~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
.+ ++..+||+|+++.++||+.+. ...+|+++.++|||||+|+++..
T Consensus 140 ~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 140 PEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSL 197 (274)
T ss_dssp HHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred chhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 21 233489999999999777653 58999999999999999999864
No 160
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.00 E-value=2.2e-10 Score=114.13 Aligned_cols=101 Identities=16% Similarity=0.044 Sum_probs=67.5
Q ss_pred CCEEEEeCCCCchHHHHHhhC----CcEEEeCCccch-HHH--HHHHHHHcCC-CeEEEEcccccCCCC-CCCeeEEEec
Q 006905 212 IRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDT-HEA--QVQFALERGV-PALIGVLAAERLPYP-SRAFDMAHCS 282 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dl-s~a--~i~~A~erg~-~~~~~v~d~~~Lpf~-d~sFDlV~~~ 282 (626)
+.+|||||||+|.++..|+++ .|+++|+++..+ ..+ +.+.+.+.+. ++.+..++...+|.. .+.+|.|+++
T Consensus 25 ~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~~ 104 (225)
T 3p2e_A 25 DRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSISIL 104 (225)
T ss_dssp SEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEEEE
T ss_pred CCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEEEe
Confidence 558999999999999999853 588999984333 221 0112223454 467888888888632 2456666665
Q ss_pred cccc----cccccHHHHHHHHHhcccCCeEEEEE
Q 006905 283 RCLI----PWNQFGGIYLIEVDRVLRPGGYWILS 312 (626)
Q Consensus 283 ~~l~----h~~~~~~~~L~Ei~RvLKPGG~lvis 312 (626)
+... +...+...+|.++.|+|||||+|++.
T Consensus 105 ~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~ 138 (225)
T 3p2e_A 105 FPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFV 138 (225)
T ss_dssp SCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEE
T ss_pred CCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEE
Confidence 4321 11122357899999999999999994
No 161
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.00 E-value=4.1e-09 Score=98.89 Aligned_cols=109 Identities=13% Similarity=0.053 Sum_probs=79.2
Q ss_pred HHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCC-CeEEEEcccccCCC
Q 006905 195 DAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGV-PALIGVLAAERLPY 271 (626)
Q Consensus 195 ~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~-~~~~~v~d~~~Lpf 271 (626)
....+.+.+.+.... +.+|||+|||+|.++..+++. .++++|+++..+..+.. .....+. .+.+...|... ++
T Consensus 21 ~~~~~~~~~~~~~~~--~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~-~~~~~~~~~~~~~~~d~~~-~~ 96 (183)
T 2yxd_A 21 EEIRAVSIGKLNLNK--DDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQ-NLAKFNIKNCQIIKGRAED-VL 96 (183)
T ss_dssp HHHHHHHHHHHCCCT--TCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHH-HHHHTTCCSEEEEESCHHH-HG
T ss_pred HHHHHHHHHHcCCCC--CCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHH-HHHHcCCCcEEEEECCccc-cc
Confidence 445555666664433 458999999999999999875 68888887755543333 2333444 46677777655 66
Q ss_pred CCCCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 272 PSRAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 272 ~d~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
++++||+|+++.+ .+...++.++.++ |||.+++..+
T Consensus 97 ~~~~~D~i~~~~~-----~~~~~~l~~~~~~--~gG~l~~~~~ 132 (183)
T 2yxd_A 97 DKLEFNKAFIGGT-----KNIEKIIEILDKK--KINHIVANTI 132 (183)
T ss_dssp GGCCCSEEEECSC-----SCHHHHHHHHHHT--TCCEEEEEES
T ss_pred cCCCCcEEEECCc-----ccHHHHHHHHhhC--CCCEEEEEec
Confidence 6789999999886 4457899999999 9999999864
No 162
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.00 E-value=7.8e-10 Score=111.92 Aligned_cols=97 Identities=19% Similarity=0.170 Sum_probs=73.4
Q ss_pred CCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCCCeeEEEecccccccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSRAFDMAHCSRCLIPWN 289 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h~~ 289 (626)
+.+|||+|||+|.++..+++. .++++|+++..+..+.. .+..+++.+.+...+... ++++++||+|+++...+
T Consensus 121 ~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~-n~~~~~~~v~~~~~d~~~-~~~~~~fD~Vv~n~~~~--- 195 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEA-NAKRNGVRPRFLEGSLEA-ALPFGPFDLLVANLYAE--- 195 (254)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHH-HHHHTTCCCEEEESCHHH-HGGGCCEEEEEEECCHH---
T ss_pred CCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHH-HHHHcCCcEEEEECChhh-cCcCCCCCEEEECCcHH---
Confidence 568999999999999988886 58899999876655443 344556556666666443 24467899999976542
Q ss_pred ccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 290 QFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 290 ~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
....++.++.++|||||++++++.
T Consensus 196 -~~~~~l~~~~~~LkpgG~lils~~ 219 (254)
T 2nxc_A 196 -LHAALAPRYREALVPGGRALLTGI 219 (254)
T ss_dssp -HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -HHHHHHHHHHHHcCCCCEEEEEee
Confidence 236789999999999999999853
No 163
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.00 E-value=5.6e-10 Score=111.07 Aligned_cols=98 Identities=19% Similarity=0.351 Sum_probs=78.1
Q ss_pred CCceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc--cceeccccccCCCCC-Cccceeeecc
Q 006905 468 GRYRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL--VGTYTNWCEAMSTYP-RTYDLIHADS 540 (626)
Q Consensus 468 ~~~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl--i~~~~~~~e~~~~yp-~t~Dlih~~~ 540 (626)
..-.+|||+|||.|.++..|++... +|+.+|.++.+++.+.++ |+ +.+.+.-.+.+. ++ ++||+|++..
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~~~ 95 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYVQ---ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP-FPDDSFDIITCRY 95 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-SCTTCEEEEEEES
T ss_pred CCCCEEEEEccCcCHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCC-CCCCcEEEEEECC
Confidence 3456899999999999999998864 899999999999987765 33 333332223332 44 8999999999
Q ss_pred ccccCCCCCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 541 VFSLYKDRCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 541 ~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
++.+.. +...+|.|+.|+|||||++++.+
T Consensus 96 ~l~~~~---~~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 96 AAHHFS---DVRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp CGGGCS---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhcc---CHHHHHHHHHHHcCCCcEEEEEE
Confidence 998876 56899999999999999999975
No 164
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.00 E-value=5.9e-10 Score=113.39 Aligned_cols=97 Identities=11% Similarity=0.143 Sum_probs=77.8
Q ss_pred CceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc-cceeccccccCCCCCCccceeeeccccccCCC
Q 006905 469 RYRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL-VGTYTNWCEAMSTYPRTYDLIHADSVFSLYKD 547 (626)
Q Consensus 469 ~~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl-i~~~~~~~e~~~~yp~t~Dlih~~~~f~~~~~ 547 (626)
.-.+|||+|||.|.++..|++.+. +|+.+|.++.+++.+.++.- +.....-.+.++ ++.+||+|++..++.+..
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~- 131 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQSGA---EVLGTDNAATMIEKARQNYPHLHFDVADARNFR-VDKPLDAVFSNAMLHWVK- 131 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHCTTSCEEECCTTTCC-CSSCEEEEEEESCGGGCS-
T ss_pred CCCEEEEecCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHhhCCCCEEEECChhhCC-cCCCcCEEEEcchhhhCc-
Confidence 356899999999999999998665 89999999999999988741 223332122222 368999999999998876
Q ss_pred CCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 548 RCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 548 ~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
+.+.+|.|+.|+|||||++++..
T Consensus 132 --d~~~~l~~~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 132 --EPEAAIASIHQALKSGGRFVAEF 154 (279)
T ss_dssp --CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --CHHHHHHHHHHhcCCCcEEEEEe
Confidence 56899999999999999999974
No 165
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.00 E-value=8.6e-10 Score=104.54 Aligned_cols=92 Identities=11% Similarity=0.056 Sum_probs=69.2
Q ss_pred CCEEEEeCCCCchHHHHHhhC-CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCCCeeEEEeccccccccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR-NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSRAFDMAHCSRCLIPWNQ 290 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~-~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h~~~ 290 (626)
+.+|||+|||+|.++..|+++ .++++|+++. +++. ...+.+.++|... ++++++||+|+++..+++..+
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~~~v~gvD~s~~-----~~~~----~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~~~~~ 93 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKRNTVVSTDLNIR-----ALES----HRGGNLVRADLLC-SINQESVDVVVFNPPYVPDTD 93 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTTSEEEEEESCHH-----HHHT----CSSSCEEECSTTT-TBCGGGCSEEEECCCCBTTCC
T ss_pred CCeEEEeccCccHHHHHHHhcCcEEEEECCHH-----HHhc----ccCCeEEECChhh-hcccCCCCEEEECCCCccCCc
Confidence 458999999999999999988 5667777553 3333 2335667777665 666789999999988754332
Q ss_pred c--------HHHHHHHHHhcccCCeEEEEEeC
Q 006905 291 F--------GGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 291 ~--------~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
. ...++.++.+.| |||.+++..+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~ 124 (170)
T 3q87_B 94 DPIIGGGYLGREVIDRFVDAV-TVGMLYLLVI 124 (170)
T ss_dssp CTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEE
T ss_pred cccccCCcchHHHHHHHHhhC-CCCEEEEEEe
Confidence 2 257889999999 9999999753
No 166
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.00 E-value=1.6e-09 Score=104.90 Aligned_cols=115 Identities=16% Similarity=0.159 Sum_probs=87.6
Q ss_pred CceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc--cceeccccccC-CCCC--Cccceeeec
Q 006905 469 RYRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL--VGTYTNWCEAM-STYP--RTYDLIHAD 539 (626)
Q Consensus 469 ~~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl--i~~~~~~~e~~-~~yp--~t~Dlih~~ 539 (626)
.-.+|||+|||.|.++..|++..- ..+|+.+|.++.+++.+.++ |+ +.+++ ..+ ...+ .+||+|.++
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~---~d~~~~~~~~~~~D~i~~~ 115 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNLMP-NGRIFALERNPQYLGFIRDNLKKFVARNVTLVE---AFAPEGLDDLPDPDRVFIG 115 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHCT-TSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEE---CCTTTTCTTSCCCSEEEES
T ss_pred CCCEEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEe---CChhhhhhcCCCCCEEEEC
Confidence 356899999999999999988740 12789999999999988776 33 23333 222 2222 789999987
Q ss_pred cccccCCCCCCHHHHHHHhhhhccCCcEEEEEcC-hHHHHHHHHHHHhCCCeeEE
Q 006905 540 SVFSLYKDRCETEDILLEMDRILRPEGGVIFRDD-VDELVKVKRIIDALKWQSQI 593 (626)
Q Consensus 540 ~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~-~~~~~~~~~~~~~l~w~~~~ 593 (626)
..+. ++..+|.++.|+|||||.+++... .+....+.++++...|+..+
T Consensus 116 ~~~~------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~~~~~ 164 (204)
T 3e05_A 116 GSGG------MLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYMVEV 164 (204)
T ss_dssp CCTT------CHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCc------CHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCCceeE
Confidence 6553 678999999999999999999854 46778888888888886553
No 167
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.00 E-value=9.9e-10 Score=109.74 Aligned_cols=96 Identities=19% Similarity=0.244 Sum_probs=77.2
Q ss_pred CceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhc--c---cceeccccccCCCCC-Cccceeeecccc
Q 006905 469 RYRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERG--L---VGTYTNWCEAMSTYP-RTYDLIHADSVF 542 (626)
Q Consensus 469 ~~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rg--l---i~~~~~~~e~~~~yp-~t~Dlih~~~~f 542 (626)
.-.+|||+|||.|.++..|++.+. +|+.+|.++.+++.+.++- . +...+.-.+.+. +| .+||+|++..+|
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l 114 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIARGY---RYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIP-LPDESVHGVIVVHLW 114 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTTTC---EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCC-SCTTCEEEEEEESCG
T ss_pred CCCEEEEeCCcCCHHHHHHHHCCC---EEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCC-CCCCCeeEEEECCch
Confidence 356899999999999999999865 7999999999999998872 1 223331112222 44 899999999999
Q ss_pred ccCCCCCCHHHHHHHhhhhccCCcEEEEE
Q 006905 543 SLYKDRCETEDILLEMDRILRPEGGVIFR 571 (626)
Q Consensus 543 ~~~~~~c~~~~~l~E~dRiLRPgG~~i~~ 571 (626)
.+.. +.+.+|.|+.|+|||||++++.
T Consensus 115 ~~~~---~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 115 HLVP---DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GGCT---THHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcC---CHHHHHHHHHHHCCCCcEEEEE
Confidence 8876 5689999999999999999986
No 168
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.00 E-value=2e-09 Score=101.12 Aligned_cols=117 Identities=12% Similarity=0.057 Sum_probs=87.2
Q ss_pred CCceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----ccc-c-eec-cccccCCCCCCccceeeecc
Q 006905 468 GRYRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GLV-G-TYT-NWCEAMSTYPRTYDLIHADS 540 (626)
Q Consensus 468 ~~~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gli-~-~~~-~~~e~~~~yp~t~Dlih~~~ 540 (626)
..-.+|||+|||.|.++..|++.. -..+|+.+|.++.+++.+.++ |+- . .++ +..+.+...+.+||+|.+..
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~ 102 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGG 102 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEECC
Confidence 335789999999999999998871 013789999999999998876 432 1 333 33344443338999999977
Q ss_pred ccccCCCCCCHHHHHHHhhhhccCCcEEEEEcC-hHHHHHHHHHHHhCCCeeE
Q 006905 541 VFSLYKDRCETEDILLEMDRILRPEGGVIFRDD-VDELVKVKRIIDALKWQSQ 592 (626)
Q Consensus 541 ~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~-~~~~~~~~~~~~~l~w~~~ 592 (626)
.+.+ ..+|.++.|+|||||.+++.+. .+....+.++++...++..
T Consensus 103 ~~~~-------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (178)
T 3hm2_A 103 GLTA-------PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFGGTIS 148 (178)
T ss_dssp -TTC-------TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHCCEEE
T ss_pred cccH-------HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcCCeeE
Confidence 7765 5699999999999999999865 4566777778777777665
No 169
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.00 E-value=4.5e-10 Score=110.72 Aligned_cols=100 Identities=19% Similarity=0.210 Sum_probs=77.6
Q ss_pred CceeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHHHhcc-cceeccccccCCCCC--Cccceeeeccccc
Q 006905 469 RYRNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIYERGL-VGTYTNWCEAMSTYP--RTYDLIHADSVFS 543 (626)
Q Consensus 469 ~~r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~rgl-i~~~~~~~e~~~~yp--~t~Dlih~~~~f~ 543 (626)
.-.+|||+|||.|.++..|++. +. +|+.+|.++.+++.+.++-- .+.+.-.+..+..+| ++||+|.+..++.
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~ 120 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLMEKYPEA---TFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFEEKYDMVVSALSIH 120 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHCTTC---EEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCCSCEEEEEEESCGG
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCC---eEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCCCCceEEEEeCccc
Confidence 3578999999999999999887 54 78999999999999988732 111111234444444 8999999999999
Q ss_pred cCCCCCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 544 LYKDRCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 544 ~~~~~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
+..+. ....+|.|+.|+|||||.+++.+
T Consensus 121 ~~~~~-~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 121 HLEDE-DKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp GSCHH-HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCHH-HHHHHHHHHHHhcCCCcEEEEEE
Confidence 88532 22359999999999999999986
No 170
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.00 E-value=3.1e-10 Score=115.72 Aligned_cols=116 Identities=16% Similarity=0.190 Sum_probs=87.9
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc-cceeccccccCCCC--CCccceeeecccc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL-VGTYTNWCEAMSTY--PRTYDLIHADSVF 542 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl-i~~~~~~~e~~~~y--p~t~Dlih~~~~f 542 (626)
-.+|||+|||.|.++.+|++.+. +|+.+|.++.+++.+.++ |+ +.++. ..+..+ +.+||+|.+..+|
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~g~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~---~d~~~~~~~~~fD~i~~~~~~ 194 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLLGY---DVTSWDHNENSIAFLNETKEKENLNISTAL---YDINAANIQENYDFIVSTVVF 194 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCEEEEE---CCGGGCCCCSCEEEEEECSSG
T ss_pred CCcEEEECCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHHcCCceEEEE---eccccccccCCccEEEEccch
Confidence 45799999999999999999976 899999999999987775 32 22222 233332 5899999999999
Q ss_pred ccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh--------------HHHHHHHHHHHhCCCeeEEe
Q 006905 543 SLYKDRCETEDILLEMDRILRPEGGVIFRDDV--------------DELVKVKRIIDALKWQSQIV 594 (626)
Q Consensus 543 ~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~--------------~~~~~~~~~~~~l~w~~~~~ 594 (626)
.+... -.+..+|.++.|+|||||.+++.... -....+++++.. |++..+
T Consensus 195 ~~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~ 257 (286)
T 3m70_A 195 MFLNR-ERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKD--WEFLEY 257 (286)
T ss_dssp GGSCG-GGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTT--SEEEEE
T ss_pred hhCCH-HHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcC--CEEEEE
Confidence 88753 36789999999999999998775321 114567777766 887654
No 171
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.00 E-value=7.7e-10 Score=108.31 Aligned_cols=100 Identities=17% Similarity=0.206 Sum_probs=77.9
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhccc-c-------eeccccccCCCC--C-Cccceeee
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGLV-G-------TYTNWCEAMSTY--P-RTYDLIHA 538 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgli-~-------~~~~~~e~~~~y--p-~t~Dlih~ 538 (626)
-.+|||+|||.|.++..|++.+. +|+.+|.++.+++.+.++.-- + .+.-.+..+..+ + ++||+|.+
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELASKGY---SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCeEEEECCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 45799999999999999999876 899999999999999885421 1 011122333333 3 89999999
Q ss_pred ccccccCCCCCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 539 DSVFSLYKDRCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 539 ~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
..++.+..+.-....+|.++.|+|||||.+++.+
T Consensus 108 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 108 QAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 9999988754334489999999999999999975
No 172
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.00 E-value=6.3e-10 Score=113.97 Aligned_cols=96 Identities=23% Similarity=0.249 Sum_probs=77.1
Q ss_pred ceeEEeccCchhhHhhhhhCC-CeEEEEeccCccCcccHHHHHHh----cc---cceeccccccCCCCC-Cccceeeecc
Q 006905 470 YRNILDMNAHLGGFAAALIDF-PVWVMNVVPAEAKINTLGVIYER----GL---VGTYTNWCEAMSTYP-RTYDLIHADS 540 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~-~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~~~~e~~~~yp-~t~Dlih~~~ 540 (626)
-.+|||+|||.|.++..|++. +. +|+.+|.++.++..+.++ |+ +.+.+.-.+.+ ++| .+||+|++..
T Consensus 83 ~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~v~~~~ 158 (297)
T 2o57_A 83 QAKGLDLGAGYGGAARFLVRKFGV---SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI-PCEDNSYDFIWSQD 158 (297)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC-SSCTTCEEEEEEES
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccC-CCCCCCEeEEEecc
Confidence 568999999999999999886 65 799999999999988775 33 33333211222 244 8999999999
Q ss_pred ccccCCCCCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 541 VFSLYKDRCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 541 ~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
++.+..+ ...+|.|+.|+|||||.+++.+
T Consensus 159 ~l~~~~~---~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 159 AFLHSPD---KLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp CGGGCSC---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhcCC---HHHHHHHHHHHcCCCeEEEEEE
Confidence 9999875 6899999999999999999985
No 173
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.00 E-value=1.4e-09 Score=116.74 Aligned_cols=123 Identities=15% Similarity=0.136 Sum_probs=83.0
Q ss_pred CCCCC-cHHHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCC----C
Q 006905 188 TMFPN-GADAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGV----P 258 (626)
Q Consensus 188 t~F~~-ga~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~----~ 258 (626)
..|.. ..+.-...+.+.+.... ..+|||+|||+|.++..++++ .|+++|+++.++..+..+. ...++ .
T Consensus 200 g~Fs~~~~d~~~~~ll~~l~~~~--~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~-~~ngl~~~~~ 276 (375)
T 4dcm_A 200 NVFSRTGLDIGARFFMQHLPENL--EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNV-ETNMPEALDR 276 (375)
T ss_dssp TCTTCSSCCHHHHHHHHTCCCSC--CSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHH-HHHCGGGGGG
T ss_pred CcccCCcccHHHHHHHHhCcccC--CCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHH-HHcCCCcCce
Confidence 33433 33333344555554333 368999999999999999886 5888998876555444333 33443 3
Q ss_pred eEEEEcccccCCCCCCCeeEEEecccccccc---ccH-HHHHHHHHhcccCCeEEEEEeC
Q 006905 259 ALIGVLAAERLPYPSRAFDMAHCSRCLIPWN---QFG-GIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 259 ~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h~~---~~~-~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+.+...|... ++++++||+|+|+..+++.. ... ..++.++.++|||||.++++.+
T Consensus 277 v~~~~~D~~~-~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n 335 (375)
T 4dcm_A 277 CEFMINNALS-GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVAN 335 (375)
T ss_dssp EEEEECSTTT-TCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEechhhc-cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 5667777555 56778999999998885421 111 4689999999999999999864
No 174
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.99 E-value=1.9e-09 Score=105.69 Aligned_cols=111 Identities=15% Similarity=0.153 Sum_probs=86.0
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcccceeccccccCCCCC-CccceeeeccccccCCCC
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGLVGTYTNWCEAMSTYP-RTYDLIHADSVFSLYKDR 548 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgli~~~~~~~e~~~~yp-~t~Dlih~~~~f~~~~~~ 548 (626)
-.+|||+|||.|.++..|++. +.+|.++.+++.+.++++ .++..-.+.++ ++ ++||+|.+..++.+..
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~~~-~~~~~d~~~~~-~~~~~fD~v~~~~~l~~~~-- 116 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKRGV-FVLKGTAENLP-LKDESFDFALMVTTICFVD-- 116 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHTTC-EEEECBTTBCC-SCTTCEEEEEEESCGGGSS--
T ss_pred CCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhcCC-EEEEcccccCC-CCCCCeeEEEEcchHhhcc--
Confidence 457999999999999999887 677888899999999854 33332122222 44 7999999999998875
Q ss_pred CCHHHHHHHhhhhccCCcEEEEEcCh------------------------HHHHHHHHHHHhCCCeeE
Q 006905 549 CETEDILLEMDRILRPEGGVIFRDDV------------------------DELVKVKRIIDALKWQSQ 592 (626)
Q Consensus 549 c~~~~~l~E~dRiLRPgG~~i~~d~~------------------------~~~~~~~~~~~~l~w~~~ 592 (626)
+...+|.++.|+|||||.+++.+.. -....+++++....++..
T Consensus 117 -~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~ 183 (219)
T 1vlm_A 117 -DPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEF 183 (219)
T ss_dssp -CHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEE
T ss_pred -CHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEE
Confidence 5689999999999999999997421 024677788888888765
No 175
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.99 E-value=2.6e-10 Score=116.46 Aligned_cols=101 Identities=17% Similarity=0.232 Sum_probs=78.5
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhc----c------cceec-cccccCC-C-CC-Cccce
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERG----L------VGTYT-NWCEAMS-T-YP-RTYDL 535 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rg----l------i~~~~-~~~e~~~-~-yp-~t~Dl 535 (626)
-.+|||+|||+|.++..|++.+. +|+.+|.++.+++.+.++. . +.+.. ++. .+. . ++ .+||+
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~fD~ 133 (293)
T 3thr_A 58 CHRVLDVACGTGVDSIMLVEEGF---SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWL-TLDKDVPAGDGFDA 133 (293)
T ss_dssp CCEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGG-GHHHHSCCTTCEEE
T ss_pred CCEEEEecCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChh-hCccccccCCCeEE
Confidence 46799999999999999999976 8999999999999998753 1 11111 111 111 0 44 89999
Q ss_pred eeec-cccccCCC----CCCHHHHHHHhhhhccCCcEEEEEcCh
Q 006905 536 IHAD-SVFSLYKD----RCETEDILLEMDRILRPEGGVIFRDDV 574 (626)
Q Consensus 536 ih~~-~~f~~~~~----~c~~~~~l~E~dRiLRPgG~~i~~d~~ 574 (626)
|+|. .+|.+..+ .-+...+|.++.|+|||||++++....
T Consensus 134 V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 134 VICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp EEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 9998 78988875 334688999999999999999998643
No 176
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.99 E-value=1.6e-09 Score=108.31 Aligned_cols=142 Identities=8% Similarity=0.013 Sum_probs=97.5
Q ss_pred CCceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc--------------------------------
Q 006905 468 GRYRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL-------------------------------- 515 (626)
Q Consensus 468 ~~~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl-------------------------------- 515 (626)
..-.+|||+|||.|.++..|++.+. .+|+.+|.++.+++.+.++--
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 3457899999999999999998865 589999999999998866531
Q ss_pred ---c-ceec-cccccCCC-CC---CccceeeeccccccCCC-CCCHHHHHHHhhhhccCCcEEEEEcChH----------
Q 006905 516 ---V-GTYT-NWCEAMST-YP---RTYDLIHADSVFSLYKD-RCETEDILLEMDRILRPEGGVIFRDDVD---------- 575 (626)
Q Consensus 516 ---i-~~~~-~~~e~~~~-yp---~t~Dlih~~~~f~~~~~-~c~~~~~l~E~dRiLRPgG~~i~~d~~~---------- 575 (626)
+ .+.+ |..+ ... -+ .+||+|.+..++.+... .-++..+|.++.|+|||||++++.+...
T Consensus 133 ~~~v~~~~~~d~~~-~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~ 211 (265)
T 2i62_A 133 RRAIKQVLKCDVTQ-SQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQK 211 (265)
T ss_dssp HHHEEEEEECCTTS-SSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEE
T ss_pred hhhheeEEEeeecc-CCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCcc
Confidence 2 2222 2222 222 13 79999999988874321 1245789999999999999999976221
Q ss_pred ------HHHHHHHHHHhCCCeeEEeecCCCC-------CCcceEEEEEec
Q 006905 576 ------ELVKVKRIIDALKWQSQIVDHEDGP-------LEREKLLFAVKL 612 (626)
Q Consensus 576 ------~~~~~~~~~~~l~w~~~~~~~e~~~-------~~~e~~l~~~K~ 612 (626)
....+.+++....+++......... ....-+++++|.
T Consensus 212 ~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~ 261 (265)
T 2i62_A 212 FSSLPLGWETVRDAVEEAGYTIEQFEVISQNYSSTTSNNEGLFSLVGRKP 261 (265)
T ss_dssp EECCCCCHHHHHHHHHHTTCEEEEEEEECCCCCTTTBCCCCEEEEEEECC
T ss_pred ccccccCHHHHHHHHHHCCCEEEEEEEecccCCccccccceEEEEEeccc
Confidence 2447888888888877644322111 112346777774
No 177
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.99 E-value=2.6e-09 Score=112.99 Aligned_cols=108 Identities=20% Similarity=0.267 Sum_probs=81.6
Q ss_pred HHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccccCCCCC
Q 006905 200 DIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAERLPYPS 273 (626)
Q Consensus 200 ~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~Lpf~d 273 (626)
.+.+.+... ...+|||||||+|.++..++++ .++++|+ +..+..+..+.. +.+. .+.+..+|....|+++
T Consensus 181 ~l~~~~~~~--~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~~~~ 256 (359)
T 1x19_A 181 LLLEEAKLD--GVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAA-EKGVADRMRGIAVDIYKESYPE 256 (359)
T ss_dssp HHHHHCCCT--TCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHH-HTTCTTTEEEEECCTTTSCCCC
T ss_pred HHHHhcCCC--CCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHH-hcCCCCCEEEEeCccccCCCCC
Confidence 444444333 3569999999999999999875 5788898 766655443333 3343 3778888887777765
Q ss_pred CCeeEEEecccccccccc-HHHHHHHHHhcccCCeEEEEEe
Q 006905 274 RAFDMAHCSRCLIPWNQF-GGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 274 ~sFDlV~~~~~l~h~~~~-~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
. |+|++..++++|.++ ...+|+++.++|||||++++..
T Consensus 257 ~--D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 257 A--DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp C--SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred C--CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 4 999999999888763 3789999999999999998875
No 178
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.99 E-value=5.3e-10 Score=112.35 Aligned_cols=100 Identities=16% Similarity=0.118 Sum_probs=72.5
Q ss_pred CCCCCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcCCCeEEEEccc---ccCCCCCCCeeEEE
Q 006905 209 DGSIRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERGVPALIGVLAA---ERLPYPSRAFDMAH 280 (626)
Q Consensus 209 ~~~~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~---~~Lpf~d~sFDlV~ 280 (626)
-.++.+|||+|||+|.++..|++. .|+++|+++.++..+. +.+.++ .++.....+. ...++..+++|+|+
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~-~~a~~~-~ni~~V~~d~~~p~~~~~~~~~vDvVf 152 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLL-TVVRDR-RNIFPILGDARFPEKYRHLVEGVDGLY 152 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHH-HHSTTC-TTEEEEESCTTCGGGGTTTCCCEEEEE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-HhhHhh-cCeeEEEEeccCccccccccceEEEEE
Confidence 344669999999999999999985 4899999886654332 233222 2344454553 34566778999999
Q ss_pred eccccccccccHHHHHHHHHhcccCCeEEEEEe
Q 006905 281 CSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 281 ~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
+... .+.+...++.++.|+|||||.++++.
T Consensus 153 ~d~~---~~~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 153 ADVA---QPEQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp ECCC---CTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred Eecc---CChhHHHHHHHHHHhccCCCEEEEEE
Confidence 8653 33455789999999999999999974
No 179
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.99 E-value=1.9e-09 Score=115.37 Aligned_cols=100 Identities=14% Similarity=0.115 Sum_probs=77.6
Q ss_pred CCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCCC--eEEEEcccccCCCCCCCeeEEEecccc
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGVP--ALIGVLAAERLPYPSRAFDMAHCSRCL 285 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~~--~~~~v~d~~~Lpf~d~sFDlV~~~~~l 285 (626)
.+.+|||||||+|.++..++++ .|+++|++ .++..+ .+.+...+.. +.+..+|...++++ ++||+|++....
T Consensus 63 ~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a-~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~~ 139 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHA-RALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWMG 139 (376)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHH-HHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECCCB
T ss_pred CCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHH-HHHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcChh
Confidence 3569999999999999999886 68899998 566544 4445556654 78888899888877 889999996644
Q ss_pred cccc--ccHHHHHHHHHhcccCCeEEEEEe
Q 006905 286 IPWN--QFGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 286 ~h~~--~~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
+... .....++.++.|+|||||.++++.
T Consensus 140 ~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 140 YFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp TTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred hcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 2222 345789999999999999998853
No 180
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.99 E-value=1.7e-09 Score=112.84 Aligned_cols=109 Identities=10% Similarity=0.054 Sum_probs=79.8
Q ss_pred HHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--C---cEEEeCCccchHHHHHHHHHHcCCC-eEEEEcccccC
Q 006905 196 AYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--N---IITMSFAPRDTHEAQVQFALERGVP-ALIGVLAAERL 269 (626)
Q Consensus 196 ~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~---V~avdis~~dls~a~i~~A~erg~~-~~~~v~d~~~L 269 (626)
.....+.+.+...+ +.+|||||||+|.++..+++. . |+++|+++..+..+. +.+...+.+ +.+...|....
T Consensus 62 ~~~~~l~~~l~~~~--~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~-~~~~~~g~~~v~~~~~d~~~~ 138 (317)
T 1dl5_A 62 SLMALFMEWVGLDK--GMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAK-RNVERLGIENVIFVCGDGYYG 138 (317)
T ss_dssp HHHHHHHHHTTCCT--TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHH-HHHHHTTCCSEEEEESCGGGC
T ss_pred HHHHHHHHhcCCCC--cCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHH-HHHHHcCCCCeEEEECChhhc
Confidence 34455666665444 459999999999999998875 3 899999875554333 233344543 67777787765
Q ss_pred CCCCCCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 270 PYPSRAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 270 pf~d~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+.++++||+|++..+++|.. .++.++|||||.+++...
T Consensus 139 ~~~~~~fD~Iv~~~~~~~~~-------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 139 VPEFSPYDVIFVTVGVDEVP-------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp CGGGCCEEEEEECSBBSCCC-------HHHHHHEEEEEEEEEEBC
T ss_pred cccCCCeEEEEEcCCHHHHH-------HHHHHhcCCCcEEEEEEC
Confidence 55567899999999886654 578899999999999854
No 181
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.98 E-value=2.1e-09 Score=108.73 Aligned_cols=97 Identities=15% Similarity=-0.006 Sum_probs=72.8
Q ss_pred CCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCC-CeEEEEcccccCCCC---CCCeeEEEec
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGV-PALIGVLAAERLPYP---SRAFDMAHCS 282 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~-~~~~~v~d~~~Lpf~---d~sFDlV~~~ 282 (626)
.+.+|||||||+|..+..|+.. .|+++|+++..+..+.. .+.+.++ ++.+..++++.++.. +++||+|+|.
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVER-AIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHH-HHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHH-HHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 4568999999999988888764 68899988765554333 3334455 477788887777643 4789999996
Q ss_pred cccccccccHHHHHHHHHhcccCCeEEEEEe
Q 006905 283 RCLIPWNQFGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 283 ~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
.+. +...++.++.++|||||+|++..
T Consensus 159 a~~-----~~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 159 AVA-----PLCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp SSC-----CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CcC-----CHHHHHHHHHHHcCCCeEEEEEe
Confidence 532 34789999999999999998864
No 182
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.98 E-value=5.9e-10 Score=112.79 Aligned_cols=97 Identities=15% Similarity=0.277 Sum_probs=76.6
Q ss_pred CceeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHHHh----cc--cceeccccccCCCCC-Cccceeeec
Q 006905 469 RYRNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIYER----GL--VGTYTNWCEAMSTYP-RTYDLIHAD 539 (626)
Q Consensus 469 ~~r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~r----gl--i~~~~~~~e~~~~yp-~t~Dlih~~ 539 (626)
.-.+|||+|||.|.++..|++. +. +|+.+|.++.+++.+.++ |+ +.....-.+.+. +| .+||+|++.
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~ 112 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKNNPDA---EITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLP-FEDSSFDHIFVC 112 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCC-SCTTCEEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCC-CCCCCeeEEEEe
Confidence 3568999999999999999876 44 789999999999988876 33 233331122222 33 899999999
Q ss_pred cccccCCCCCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 540 SVFSLYKDRCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 540 ~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
.++.+.. +.+.+|.++.|+|||||++++.+
T Consensus 113 ~~l~~~~---~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 113 FVLEHLQ---SPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp SCGGGCS---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhhcC---CHHHHHHHHHHHcCCCcEEEEEE
Confidence 9999887 45899999999999999999975
No 183
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.98 E-value=9.3e-10 Score=111.03 Aligned_cols=95 Identities=25% Similarity=0.302 Sum_probs=76.6
Q ss_pred CceeEEeccCchhhHhhhhhCC-CeEEEEeccCccCcccHHHHHHh----cc---cceeccccccCC--CCC-Cccceee
Q 006905 469 RYRNILDMNAHLGGFAAALIDF-PVWVMNVVPAEAKINTLGVIYER----GL---VGTYTNWCEAMS--TYP-RTYDLIH 537 (626)
Q Consensus 469 ~~r~vlD~g~g~G~faa~l~~~-~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~~~~e~~~--~yp-~t~Dlih 537 (626)
.-.+|||+|||.|.++..|++. +. +|+.+|.++.+++.+.++ |+ +.+.+ ..+. ++| .+||+|+
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~---~d~~~~~~~~~~fD~v~ 134 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLATARDV---RVTGISISRPQVNQANARATAAGLANRVTFSY---ADAMDLPFEDASFDAVW 134 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHSCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE---CCTTSCCSCTTCEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhcCC---EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEE---CccccCCCCCCCccEEE
Confidence 3568999999999999999874 44 899999999999988776 44 33333 2222 244 8999999
Q ss_pred eccccccCCCCCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 538 ADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 538 ~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
+..+|.+..+ .+.+|.|+.|+|||||.+++.+
T Consensus 135 ~~~~l~~~~~---~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 135 ALESLHHMPD---RGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp EESCTTTSSC---HHHHHHHHHTTEEEEEEEEEEE
T ss_pred EechhhhCCC---HHHHHHHHHHHcCCCeEEEEEE
Confidence 9999998864 5899999999999999999986
No 184
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.98 E-value=1.7e-09 Score=107.25 Aligned_cols=99 Identities=13% Similarity=0.127 Sum_probs=73.3
Q ss_pred CCCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcCCCeEEEEccccc---CCCCCCCeeEEEec
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAER---LPYPSRAFDMAHCS 282 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~---Lpf~d~sFDlV~~~ 282 (626)
.+.+|||+|||+|.++..|+++ .++++|+++.++. .+++.+..+ ..+.+..+|... +++.+++||+|++.
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~-~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V~~~ 154 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGR-DLINLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVIFAD 154 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHH-HHHHHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEEEEC
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHH-HHHHHhhcc-CCeEEEEcccCChhhhcccCCcEEEEEEc
Confidence 3569999999999999998875 5888998774433 345556554 456777777655 45567899999996
Q ss_pred cccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 283 RCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 283 ~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
.. ..+....++.++.++|||||.++++..
T Consensus 155 ~~---~~~~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 155 VA---QPDQTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp CC---CTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CC---CccHHHHHHHHHHHHcCCCeEEEEEEc
Confidence 54 222225568899999999999999754
No 185
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.98 E-value=2.7e-09 Score=102.50 Aligned_cols=141 Identities=15% Similarity=0.088 Sum_probs=99.5
Q ss_pred eeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHHHh----cc---cceeccccccCCCC-CCccceeeecc
Q 006905 471 RNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIYER----GL---VGTYTNWCEAMSTY-PRTYDLIHADS 540 (626)
Q Consensus 471 r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~~~~e~~~~y-p~t~Dlih~~~ 540 (626)
.+|||+|||.|.++..|++. +- .+|+.+|.++.+++.+.++ |+ +.+++.-.+.+..+ +.+||+|.++.
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 101 (197)
T 3eey_A 24 DTVVDATCGNGNDTAFLASLVGEN--GRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNL 101 (197)
T ss_dssp CEEEESCCTTSHHHHHHHHHHCTT--CEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEE
T ss_pred CEEEEcCCCCCHHHHHHHHHhCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcC
Confidence 47999999999999999875 21 1789999999999988776 33 34444223334433 48999999876
Q ss_pred ccccCCC------CCCHHHHHHHhhhhccCCcEEEEEc------ChHHHHHHHHHHHhCC---CeeEEeecCCCCCCcce
Q 006905 541 VFSLYKD------RCETEDILLEMDRILRPEGGVIFRD------DVDELVKVKRIIDALK---WQSQIVDHEDGPLEREK 605 (626)
Q Consensus 541 ~f~~~~~------~c~~~~~l~E~dRiLRPgG~~i~~d------~~~~~~~~~~~~~~l~---w~~~~~~~e~~~~~~e~ 605 (626)
.+-...+ .-+...+|.++.|+|||||++++.+ ..+....+.+.++.+. |.+..+..-+.+..+..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~pp~ 181 (197)
T 3eey_A 102 GYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFINQANCPPI 181 (197)
T ss_dssp SBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEETTCCSCCCE
T ss_pred CcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEeccCccCCCe
Confidence 5511111 1123469999999999999999974 2234566777776665 88877666666667788
Q ss_pred EEEEEecc
Q 006905 606 LLFAVKLY 613 (626)
Q Consensus 606 ~l~~~K~~ 613 (626)
++|.+|..
T Consensus 182 ~~~~~~~~ 189 (197)
T 3eey_A 182 LVCIEKIS 189 (197)
T ss_dssp EEEEEECC
T ss_pred EEEEEEcc
Confidence 88888854
No 186
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.98 E-value=3e-09 Score=111.13 Aligned_cols=99 Identities=13% Similarity=0.040 Sum_probs=77.2
Q ss_pred CEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHc-CCCeEEEEcccccCCCCCCCeeEEEecccccc
Q 006905 213 RTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALER-GVPALIGVLAAERLPYPSRAFDMAHCSRCLIP 287 (626)
Q Consensus 213 ~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~er-g~~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h 287 (626)
.+|||||||+|.++..++++ .++++|+ +..+..+........ ...+.+..+|... +++ ++||+|++..++|+
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~vl~~ 245 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLSRIIGD 245 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEESCGGG
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEchhccC
Confidence 69999999999999998875 5889999 767765544433221 2246777777655 555 67999999999988
Q ss_pred ccccH-HHHHHHHHhcccCCeEEEEEeC
Q 006905 288 WNQFG-GIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 288 ~~~~~-~~~L~Ei~RvLKPGG~lvis~p 314 (626)
|.+.. ..+|+++.++|||||++++...
T Consensus 246 ~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 273 (334)
T 2ip2_A 246 LDEAASLRLLGNCREAMAGDGRVVVIER 273 (334)
T ss_dssp CCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 87643 4899999999999999999864
No 187
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.97 E-value=1.5e-09 Score=113.57 Aligned_cols=99 Identities=18% Similarity=0.199 Sum_probs=74.9
Q ss_pred CCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccccCCCCCCCeeEEEecccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAERLPYPSRAFDMAHCSRCL 285 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~Lpf~d~sFDlV~~~~~l 285 (626)
..+|||||||+|.++..++++ .++++|+ +..+..+.. ...+.++ .+.+..+|.. .+++. +||+|++..++
T Consensus 170 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~vl 245 (332)
T 3i53_A 170 LGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHR-RFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSAVL 245 (332)
T ss_dssp GSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHH-HHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEESCG
T ss_pred CCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHH-hhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEehhh
Confidence 569999999999999998874 4667777 544433322 2223343 4778877765 45555 89999999999
Q ss_pred ccccccH-HHHHHHHHhcccCCeEEEEEeC
Q 006905 286 IPWNQFG-GIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 286 ~h~~~~~-~~~L~Ei~RvLKPGG~lvis~p 314 (626)
|+|.++. ..+|+++.++|||||++++...
T Consensus 246 h~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 246 HDWDDLSAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp GGSCHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHhcCCCCEEEEEee
Confidence 8887653 7899999999999999999764
No 188
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.97 E-value=6.7e-10 Score=114.12 Aligned_cols=100 Identities=15% Similarity=0.176 Sum_probs=72.6
Q ss_pred CceeEEeccCchhhHhhhh----hC--CCeEEEEeccCccCcccHHHHHHh-----cccceeccc----cccCC-----C
Q 006905 469 RYRNILDMNAHLGGFAAAL----ID--FPVWVMNVVPAEAKINTLGVIYER-----GLVGTYTNW----CEAMS-----T 528 (626)
Q Consensus 469 ~~r~vlD~g~g~G~faa~l----~~--~~v~~mnv~~~~~~~~~l~~~~~r-----gli~~~~~~----~e~~~-----~ 528 (626)
.-.+|||+|||+|.++..+ +. .++ ...++.+|.+++|++.+.++ |+-.+--.| .+.+. .
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~-~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGV-CINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTC-EEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCc-eeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 3568999999999876533 32 133 23569999999999998887 331111111 12222 1
Q ss_pred CC-CccceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 529 YP-RTYDLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 529 yp-~t~Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
++ ++||+|+|..++.+.. +.+.+|.||.|+|||||++++..
T Consensus 131 ~~~~~fD~V~~~~~l~~~~---d~~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVK---DIPATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp TCCCCEEEEEEESCGGGCS---CHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCCceeEEEEeeeeeecC---CHHHHHHHHHHHcCCCcEEEEEE
Confidence 44 8999999999999987 56899999999999999999863
No 189
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.97 E-value=5.9e-10 Score=111.30 Aligned_cols=116 Identities=14% Similarity=0.170 Sum_probs=86.7
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc---cceeccccccCCCCC-Cccceeeeccc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL---VGTYTNWCEAMSTYP-RTYDLIHADSV 541 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~~~~e~~~~yp-~t~Dlih~~~~ 541 (626)
-.+|||+|||.|.++..|++..- .+|+.+|.++.+++.+.++ |+ +.+.+.=.+.++ +| .+||+|++..+
T Consensus 47 ~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~ 123 (257)
T 3f4k_A 47 DAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLP-FQNEELDLIWSEGA 123 (257)
T ss_dssp TCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCS-SCTTCEEEEEEESC
T ss_pred CCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCC-CCCCCEEEEEecCh
Confidence 45899999999999999988732 1789999999999987776 33 233331112332 34 89999999999
Q ss_pred cccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh---------------------HHHHHHHHHHHhCCCeeE
Q 006905 542 FSLYKDRCETEDILLEMDRILRPEGGVIFRDDV---------------------DELVKVKRIIDALKWQSQ 592 (626)
Q Consensus 542 f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~---------------------~~~~~~~~~~~~l~w~~~ 592 (626)
+.+. +.+.+|.++.|+|||||++++.+.. .....+.+++..-.++..
T Consensus 124 l~~~----~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v 191 (257)
T 3f4k_A 124 IYNI----GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPT 191 (257)
T ss_dssp SCCC----CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEE
T ss_pred Hhhc----CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEE
Confidence 9876 5789999999999999999998631 123556677777777654
No 190
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.97 E-value=3.8e-09 Score=102.82 Aligned_cols=111 Identities=14% Similarity=0.123 Sum_probs=76.0
Q ss_pred HHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcCC-CeEEEEcccccC
Q 006905 196 AYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERGV-PALIGVLAAERL 269 (626)
Q Consensus 196 ~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg~-~~~~~v~d~~~L 269 (626)
.....+.+.+...+ +.+|||||||+|.++..+++. .++++|+++..+..+..... ..+. .+.+...|....
T Consensus 64 ~~~~~~~~~~~~~~--~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~v~~~~~d~~~~ 140 (215)
T 2yxe_A 64 HMVGMMCELLDLKP--GMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLR-KLGYDNVIVIVGDGTLG 140 (215)
T ss_dssp HHHHHHHHHTTCCT--TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHH-HHTCTTEEEEESCGGGC
T ss_pred HHHHHHHHhhCCCC--CCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHH-HcCCCCeEEEECCcccC
Confidence 34445555554333 459999999999999888774 48888887755544333222 2343 356666665332
Q ss_pred CCCCCCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCCC
Q 006905 270 PYPSRAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGPPI 316 (626)
Q Consensus 270 pf~d~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~pp~ 316 (626)
...+++||+|++..++++.. .++.++|||||.+++..++.
T Consensus 141 ~~~~~~fD~v~~~~~~~~~~-------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 141 YEPLAPYDRIYTTAAGPKIP-------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp CGGGCCEEEEEESSBBSSCC-------HHHHHTEEEEEEEEEEESSS
T ss_pred CCCCCCeeEEEECCchHHHH-------HHHHHHcCCCcEEEEEECCC
Confidence 22367899999999886654 47899999999999987643
No 191
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.97 E-value=6e-10 Score=112.47 Aligned_cols=96 Identities=23% Similarity=0.335 Sum_probs=77.5
Q ss_pred CceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcccceeccccccCCCCC-CccceeeeccccccCCC
Q 006905 469 RYRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGLVGTYTNWCEAMSTYP-RTYDLIHADSVFSLYKD 547 (626)
Q Consensus 469 ~~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgli~~~~~~~e~~~~yp-~t~Dlih~~~~f~~~~~ 547 (626)
.-.+|||+|||+|.++..|++.+. +|+.+|.++.+++.+.++.-+...+.-.+.++ +| ++||+||+..++.+..
T Consensus 34 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~~~- 108 (261)
T 3ege_A 34 KGSVIADIGAGTGGYSVALANQGL---FVYAVEPSIVMRQQAVVHPQVEWFTGYAENLA-LPDKSVDGVISILAIHHFS- 108 (261)
T ss_dssp TTCEEEEETCTTSHHHHHHHTTTC---EEEEECSCHHHHHSSCCCTTEEEECCCTTSCC-SCTTCBSEEEEESCGGGCS-
T ss_pred CCCEEEEEcCcccHHHHHHHhCCC---EEEEEeCCHHHHHHHHhccCCEEEECchhhCC-CCCCCEeEEEEcchHhhcc-
Confidence 357899999999999999999775 89999999888887777653444443233333 44 8999999999998885
Q ss_pred CCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 548 RCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 548 ~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
+.+.+|.|+.|+|| ||++++.+
T Consensus 109 --~~~~~l~~~~~~Lk-gG~~~~~~ 130 (261)
T 3ege_A 109 --HLEKSFQEMQRIIR-DGTIVLLT 130 (261)
T ss_dssp --SHHHHHHHHHHHBC-SSCEEEEE
T ss_pred --CHHHHHHHHHHHhC-CcEEEEEE
Confidence 66899999999999 99888764
No 192
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.97 E-value=7.5e-10 Score=113.89 Aligned_cols=95 Identities=11% Similarity=0.097 Sum_probs=74.5
Q ss_pred CceeEEeccCchhhHhhhhh---CCCeEEEEeccCccCcccHHHHHHh-----cc---cceeccccccCCCCC------C
Q 006905 469 RYRNILDMNAHLGGFAAALI---DFPVWVMNVVPAEAKINTLGVIYER-----GL---VGTYTNWCEAMSTYP------R 531 (626)
Q Consensus 469 ~~r~vlD~g~g~G~faa~l~---~~~v~~mnv~~~~~~~~~l~~~~~r-----gl---i~~~~~~~e~~~~yp------~ 531 (626)
.-.+|||+|||.|.++..|+ ..+. +|+.+|.++.+++.+.++ |. +..++.-.+.+..-. +
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 112 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFE---QIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQ 112 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCS---EEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSS
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCC---EEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCC
Confidence 46789999999999999999 4554 799999999999999887 32 233332122222111 6
Q ss_pred ccceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEE
Q 006905 532 TYDLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIF 570 (626)
Q Consensus 532 t~Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~ 570 (626)
+||+|++..++.+. +...+|.++.|+|||||++++
T Consensus 113 ~fD~V~~~~~l~~~----~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 113 KIDMITAVECAHWF----DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CEEEEEEESCGGGS----CHHHHHHHHHHHEEEEEEEEE
T ss_pred CeeEEeHhhHHHHh----CHHHHHHHHHHhcCCCcEEEE
Confidence 99999999998887 679999999999999999998
No 193
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.97 E-value=3.1e-09 Score=100.28 Aligned_cols=112 Identities=18% Similarity=0.148 Sum_probs=78.3
Q ss_pred HHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccccCC
Q 006905 195 DAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAERLP 270 (626)
Q Consensus 195 ~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~Lp 270 (626)
......+.+.+.... +.+|||+|||+|.++..+++. .++++|+++..+..+..+ ....+. .+.+...|... +
T Consensus 19 ~~~~~~~~~~~~~~~--~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~-~~~~~~~~~~~~~~~d~~~-~ 94 (192)
T 1l3i_A 19 MEVRCLIMCLAEPGK--NDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMN-LQRHGLGDNVTLMEGDAPE-A 94 (192)
T ss_dssp HHHHHHHHHHHCCCT--TCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHH-HHHTTCCTTEEEEESCHHH-H
T ss_pred HHHHHHHHHhcCCCC--CCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHH-HHHcCCCcceEEEecCHHH-h
Confidence 334444555554433 459999999999999999886 688888877544433322 223444 46666666544 2
Q ss_pred CCC-CCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 271 YPS-RAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 271 f~d-~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+++ ++||+|++..++++ ...++.++.++|+|||.+++..+
T Consensus 95 ~~~~~~~D~v~~~~~~~~----~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 95 LCKIPDIDIAVVGGSGGE----LQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp HTTSCCEEEEEESCCTTC----HHHHHHHHHHTEEEEEEEEEEEC
T ss_pred cccCCCCCEEEECCchHH----HHHHHHHHHHhcCCCcEEEEEec
Confidence 233 58999999887633 47899999999999999999854
No 194
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.97 E-value=9.5e-10 Score=111.02 Aligned_cols=116 Identities=16% Similarity=0.159 Sum_probs=87.7
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc---cceeccccccCCCCC-Cccceeeeccc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL---VGTYTNWCEAMSTYP-RTYDLIHADSV 541 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~~~~e~~~~yp-~t~Dlih~~~~ 541 (626)
-.+|||+|||.|.++..|++.+- .+|+.+|.++.+++.+.++ |+ +.+...-.+.++ +| .+||+|+|..+
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~i~~~~~ 123 (267)
T 3kkz_A 47 KSLIADIGCGTGGQTMVLAGHVT--GQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLP-FRNEELDLIWSEGA 123 (267)
T ss_dssp TCEEEEETCTTCHHHHHHHTTCS--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-CCTTCEEEEEESSC
T ss_pred CCEEEEeCCCCCHHHHHHHhccC--CEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCC-CCCCCEEEEEEcCC
Confidence 56899999999999999998843 3789999999999988776 33 333332112222 34 89999999999
Q ss_pred cccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh---------------------HHHHHHHHHHHhCCCeeE
Q 006905 542 FSLYKDRCETEDILLEMDRILRPEGGVIFRDDV---------------------DELVKVKRIIDALKWQSQ 592 (626)
Q Consensus 542 f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~---------------------~~~~~~~~~~~~l~w~~~ 592 (626)
|.+. +...+|.++.|+|||||++++.+.. .....+.+++....++..
T Consensus 124 ~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v 191 (267)
T 3kkz_A 124 IYNI----GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPV 191 (267)
T ss_dssp GGGT----CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEE
T ss_pred ceec----CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEE
Confidence 9887 4689999999999999999998531 124466677777777654
No 195
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.97 E-value=2.2e-09 Score=111.27 Aligned_cols=135 Identities=17% Similarity=0.101 Sum_probs=94.8
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhc--ccceecccccc--CCCCC-Cccceeeecccccc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERG--LVGTYTNWCEA--MSTYP-RTYDLIHADSVFSL 544 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rg--li~~~~~~~e~--~~~yp-~t~Dlih~~~~f~~ 544 (626)
-++|||+|||+|+|+..|++.+. -.|+++|.+++||..+..+. ++..-...... ...+| .+||+|.++.+|..
T Consensus 86 g~~vLDiGcGTG~~t~~L~~~ga--~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~s 163 (291)
T 3hp7_A 86 DMITIDIGASTGGFTDVMLQNGA--KLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFIS 163 (291)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC--SEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSSC
T ss_pred ccEEEecCCCccHHHHHHHhCCC--CEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEeeHhh
Confidence 46899999999999999988864 36899999999999866532 11110000111 12356 46999999888863
Q ss_pred CCCCCCHHHHHHHhhhhccCCcEEEEEcC----------------------hHHHHHHHHHHHhCCCeeEEee--cCCCC
Q 006905 545 YKDRCETEDILLEMDRILRPEGGVIFRDD----------------------VDELVKVKRIIDALKWQSQIVD--HEDGP 600 (626)
Q Consensus 545 ~~~~c~~~~~l~E~dRiLRPgG~~i~~d~----------------------~~~~~~~~~~~~~l~w~~~~~~--~e~~~ 600 (626)
+..+|.|+.|+|||||.+++... .....++...+....|.+.-.. .-.|+
T Consensus 164 ------l~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~spi~g~ 237 (291)
T 3hp7_A 164 ------LNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDFSPIQGG 237 (291)
T ss_dssp ------GGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEECSSCCG
T ss_pred ------HHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC
Confidence 47799999999999999998611 1256778888888999876433 22344
Q ss_pred C-CcceEEEEEec
Q 006905 601 L-EREKLLFAVKL 612 (626)
Q Consensus 601 ~-~~e~~l~~~K~ 612 (626)
. +.|-++.++|.
T Consensus 238 ~gn~e~l~~~~~~ 250 (291)
T 3hp7_A 238 HGNIEFLAHLEKT 250 (291)
T ss_dssp GGCCCEEEEEEEC
T ss_pred CcCHHHHHHhhhc
Confidence 3 45777777763
No 196
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.97 E-value=3e-09 Score=113.27 Aligned_cols=99 Identities=20% Similarity=0.176 Sum_probs=74.8
Q ss_pred CCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccccCCCCCCCeeEEEeccc
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAERLPYPSRAFDMAHCSRC 284 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~Lpf~d~sFDlV~~~~~ 284 (626)
...+|||||||+|.++..++++ .++++|+ +..+..+... ..+.++ .+.+..+|.. .+++. .||+|++..+
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-~~~~~l~~~v~~~~~d~~-~~~p~-~~D~v~~~~v 277 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEAREL-LTGRGLADRCEILPGDFF-ETIPD-GADVYLIKHV 277 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHH-HHHTTCTTTEEEEECCTT-TCCCS-SCSEEEEESC
T ss_pred cCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHh-hhhcCcCCceEEeccCCC-CCCCC-CceEEEhhhh
Confidence 3569999999999999999886 4677777 5444333322 223343 4778777866 56666 8999999999
Q ss_pred cccccccH-HHHHHHHHhcccCCeEEEEEe
Q 006905 285 LIPWNQFG-GIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 285 l~h~~~~~-~~~L~Ei~RvLKPGG~lvis~ 313 (626)
+|+|.+.. ..+|+++.++|||||+|++..
T Consensus 278 lh~~~d~~~~~~L~~~~~~L~pgG~l~i~e 307 (369)
T 3gwz_A 278 LHDWDDDDVVRILRRIATAMKPDSRLLVID 307 (369)
T ss_dssp GGGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred hccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 98887643 479999999999999999975
No 197
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.96 E-value=1.3e-09 Score=108.89 Aligned_cols=123 Identities=15% Similarity=0.112 Sum_probs=87.5
Q ss_pred hhhhcCCCCCceeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHHHhcc-cceeccccccCCCCCCcccee
Q 006905 460 MNNQLGQSGRYRNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIYERGL-VGTYTNWCEAMSTYPRTYDLI 536 (626)
Q Consensus 460 ~~~~~~~~~~~r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~rgl-i~~~~~~~e~~~~yp~t~Dli 536 (626)
++..+.. ..-.+|||+|||.|.++..|++. +. +|+.+|.++.+++.+.++.- +...+.-.+.+. .+.+||+|
T Consensus 25 l~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v 99 (259)
T 2p35_A 25 LLAQVPL-ERVLNGYDLGCGPGNSTELLTDRYGVN---VITGIDSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLL 99 (259)
T ss_dssp HHTTCCC-SCCSSEEEETCTTTHHHHHHHHHHCTT---SEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEE
T ss_pred HHHhcCC-CCCCEEEEecCcCCHHHHHHHHhCCCC---EEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEE
Confidence 3333333 34568999999999999999876 44 68899999999999988832 233332122333 23899999
Q ss_pred eeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh----HHHHHHHHHHHhCCCe
Q 006905 537 HADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV----DELVKVKRIIDALKWQ 590 (626)
Q Consensus 537 h~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~----~~~~~~~~~~~~l~w~ 590 (626)
++..++.+.. +...+|.|+.|+|||||++++.... .....+.++.....|.
T Consensus 100 ~~~~~l~~~~---~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (259)
T 2p35_A 100 YANAVFQWVP---DHLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGGPWK 154 (259)
T ss_dssp EEESCGGGST---THHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHHSTTG
T ss_pred EEeCchhhCC---CHHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcCcchH
Confidence 9999999875 5689999999999999999998532 1223344455444554
No 198
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.96 E-value=2.8e-09 Score=112.85 Aligned_cols=113 Identities=12% Similarity=0.099 Sum_probs=83.7
Q ss_pred HHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccccC
Q 006905 195 DAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAERL 269 (626)
Q Consensus 195 ~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~L 269 (626)
..|.+.|.+.+.... +.+|||||||+|.++..++++ .|+++|+++ +.. ...+.+...+. .+.+..+|...+
T Consensus 36 ~~y~~~i~~~l~~~~--~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~-~a~~~~~~~~l~~~v~~~~~d~~~~ 111 (348)
T 2y1w_A 36 GTYQRAILQNHTDFK--DKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQ-HAEVLVKSNNLTDRIVVIPGKVEEV 111 (348)
T ss_dssp HHHHHHHHHTGGGTT--TCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHH-HHHHHHHHTTCTTTEEEEESCTTTC
T ss_pred HHHHHHHHhccccCC--cCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHH-HHHHHHHHcCCCCcEEEEEcchhhC
Confidence 345555666554443 458999999999999998876 588999975 443 33344445554 477788888887
Q ss_pred CCCCCCeeEEEecccccccccc-HHHHHHHHHhcccCCeEEEEE
Q 006905 270 PYPSRAFDMAHCSRCLIPWNQF-GGIYLIEVDRVLRPGGYWILS 312 (626)
Q Consensus 270 pf~d~sFDlV~~~~~l~h~~~~-~~~~L~Ei~RvLKPGG~lvis 312 (626)
+++ ++||+|++...++|+... ....+.++.++|||||.+++.
T Consensus 112 ~~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 112 SLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp CCS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred CCC-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 765 579999999887777643 367888999999999999975
No 199
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.96 E-value=8.2e-10 Score=114.52 Aligned_cols=95 Identities=14% Similarity=0.092 Sum_probs=76.8
Q ss_pred CCceeEEeccCchhhHhhhhhCC-CeEEEEeccCccCcccHHHHHHh----cc---cceeccccccCCC--CC-Ccccee
Q 006905 468 GRYRNILDMNAHLGGFAAALIDF-PVWVMNVVPAEAKINTLGVIYER----GL---VGTYTNWCEAMST--YP-RTYDLI 536 (626)
Q Consensus 468 ~~~r~vlD~g~g~G~faa~l~~~-~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~~~~e~~~~--yp-~t~Dli 536 (626)
..-.+|||+|||.|.++..|++. +. +|+.+|.++.+++.+.++ |+ +..+. ..+.. +| ++||+|
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~~~~~~~fD~V 189 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFGS---RVEGVTLSAAQADFGNRRARELRIDDHVRSRV---CNMLDTPFDKGAVTAS 189 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE---CCTTSCCCCTTCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEE---CChhcCCCCCCCEeEE
Confidence 34678999999999999999987 54 789999999999988775 33 23333 23333 44 899999
Q ss_pred eeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 537 HADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 537 h~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
.+..++.+.. ...+|.|+.|+|||||++++.+
T Consensus 190 ~~~~~l~~~~----~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 190 WNNESTMYVD----LHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp EEESCGGGSC----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCchhhCC----HHHHHHHHHHHcCCCcEEEEEE
Confidence 9999998873 7999999999999999999975
No 200
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.96 E-value=1.5e-09 Score=106.01 Aligned_cols=100 Identities=12% Similarity=0.140 Sum_probs=77.0
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhc-----------ccceeccccccCCCCC---Cccce
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERG-----------LVGTYTNWCEAMSTYP---RTYDL 535 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rg-----------li~~~~~~~e~~~~yp---~t~Dl 535 (626)
-.+|||+|||.|.++.+|++.+- ..+|+.+|.++.+++.+.++- -+.++. ..+...+ .+||+
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~---~d~~~~~~~~~~fD~ 105 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILLKDSF-FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQ---GALTYQDKRFHGYDA 105 (217)
T ss_dssp CCEEEEETCTTCHHHHHHHHCTT-CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEE---CCTTSCCGGGCSCSE
T ss_pred CCEEEEeCCCCCHHHHHHHhhCC-CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEe---CCcccccccCCCcCE
Confidence 45899999999999999998631 127899999999999998872 123333 2333323 79999
Q ss_pred eeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh
Q 006905 536 IHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV 574 (626)
Q Consensus 536 ih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~ 574 (626)
|.|..+|.+... -++..+|.++.|+|||||.+++.+..
T Consensus 106 v~~~~~l~~~~~-~~~~~~l~~~~~~LkpgG~li~~~~~ 143 (217)
T 3jwh_A 106 ATVIEVIEHLDL-SRLGAFERVLFEFAQPKIVIVTTPNI 143 (217)
T ss_dssp EEEESCGGGCCH-HHHHHHHHHHHTTTCCSEEEEEEEBH
T ss_pred EeeHHHHHcCCH-HHHHHHHHHHHHHcCCCEEEEEccCc
Confidence 999999998853 24578999999999999999887654
No 201
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.96 E-value=8.6e-10 Score=104.10 Aligned_cols=117 Identities=12% Similarity=-0.010 Sum_probs=77.0
Q ss_pred HHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCCC--eEEEEccccc-
Q 006905 195 DAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGVP--ALIGVLAAER- 268 (626)
Q Consensus 195 ~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~~--~~~~v~d~~~- 268 (626)
+...+.+.+.+.. ...+.+|||+|||+|.++..++++ .++++|+++..+..+.. .+...+.. +.+...|...
T Consensus 16 ~~~~~~~~~~l~~-~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~-~~~~~~~~~~~~~~~~d~~~~ 93 (177)
T 2esr_A 16 DKVRGAIFNMIGP-YFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQD-NIIMTKAENRFTLLKMEAERA 93 (177)
T ss_dssp --CHHHHHHHHCS-CCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHH-HHHTTTCGGGEEEECSCHHHH
T ss_pred HHHHHHHHHHHHh-hcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHH-HHHHcCCCCceEEEECcHHHh
Confidence 3344455555541 123458999999999999988876 57888887755443332 23334443 6677777555
Q ss_pred CCCCCCCeeEEEeccccccccccHHHHHHHHH--hcccCCeEEEEEeCC
Q 006905 269 LPYPSRAFDMAHCSRCLIPWNQFGGIYLIEVD--RVLRPGGYWILSGPP 315 (626)
Q Consensus 269 Lpf~d~sFDlV~~~~~l~h~~~~~~~~L~Ei~--RvLKPGG~lvis~pp 315 (626)
++..+++||+|+++..+ +. ......+..+. ++|+|||.+++..+.
T Consensus 94 ~~~~~~~fD~i~~~~~~-~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 94 IDCLTGRFDLVFLDPPY-AK-ETIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp HHHBCSCEEEEEECCSS-HH-HHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred HHhhcCCCCEEEECCCC-Cc-chHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 44445679999998765 22 22356777776 999999999998653
No 202
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.96 E-value=1.9e-09 Score=101.93 Aligned_cols=131 Identities=17% Similarity=0.177 Sum_probs=90.5
Q ss_pred CceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc----cceec-cccccCCCC-CCccceeee
Q 006905 469 RYRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL----VGTYT-NWCEAMSTY-PRTYDLIHA 538 (626)
Q Consensus 469 ~~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl----i~~~~-~~~e~~~~y-p~t~Dlih~ 538 (626)
.-.+|||+|||.|.++..+++.+. +|+.+|.++.+++.+.++ |+ +.+.+ |+.+ .. +.+||+|.+
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~D~v~~ 125 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADEVK---STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE---NVKDRKYNKIIT 125 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT---TCTTSCEEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc---ccccCCceEEEE
Confidence 356899999999999999998854 899999998999988876 33 23333 2222 22 379999999
Q ss_pred ccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh-HHHHHHHHHHHhCCCeeEEeecCCCCCCcceEEEEEe
Q 006905 539 DSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV-DELVKVKRIIDALKWQSQIVDHEDGPLEREKLLFAVK 611 (626)
Q Consensus 539 ~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~-~~~~~~~~~~~~l~w~~~~~~~e~~~~~~e~~l~~~K 611 (626)
+..|.+.. -.+..+|.++.|+|||||.+++.+.. +....+.+.++..-+++.+.... ..-.+++++|
T Consensus 126 ~~~~~~~~--~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~k 193 (194)
T 1dus_A 126 NPPIRAGK--EVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDVFGNVETVTIK----GGYRVLKSKK 193 (194)
T ss_dssp CCCSTTCH--HHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHHHSCCEEEEEE----TTEEEEEEEC
T ss_pred CCCcccch--hHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHHhcceEEEecC----CcEEEEEEee
Confidence 87765421 24578999999999999999998654 33444555555543444444333 2345566554
No 203
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.96 E-value=2.1e-09 Score=101.81 Aligned_cols=136 Identities=13% Similarity=0.085 Sum_probs=98.3
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc-cceeccccccCCC--CC-Cccceeeec-ccccc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL-VGTYTNWCEAMST--YP-RTYDLIHAD-SVFSL 544 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl-i~~~~~~~e~~~~--yp-~t~Dlih~~-~~f~~ 544 (626)
-.+|||+|||.|.++..|++.+. +|+.+|.++.++..+.++.- +.+++ ..+.. +| ++||+|.+. .++.+
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~---~d~~~~~~~~~~~D~i~~~~~~~~~ 120 (195)
T 3cgg_A 47 GAKILDAGCGQGRIGGYLSKQGH---DVLGTDLDPILIDYAKQDFPEARWVV---GDLSVDQISETDFDLIVSAGNVMGF 120 (195)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHCTTSEEEE---CCTTTSCCCCCCEEEEEECCCCGGG
T ss_pred CCeEEEECCCCCHHHHHHHHCCC---cEEEEcCCHHHHHHHHHhCCCCcEEE---cccccCCCCCCceeEEEECCcHHhh
Confidence 45899999999999999998875 89999999899998888742 23333 22222 44 899999998 56766
Q ss_pred CCCCCCHHHHHHHhhhhccCCcEEEEEcChH---HHHHHHHHHHhCCCeeEEeecC--CCC---CCcceEEEEEec
Q 006905 545 YKDRCETEDILLEMDRILRPEGGVIFRDDVD---ELVKVKRIIDALKWQSQIVDHE--DGP---LEREKLLFAVKL 612 (626)
Q Consensus 545 ~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~~---~~~~~~~~~~~l~w~~~~~~~e--~~~---~~~e~~l~~~K~ 612 (626)
... -+...+|.++.|+|+|||.+++..... ....+.++++...+++...... ..+ ..+.-+++++|+
T Consensus 121 ~~~-~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~v~~k~ 195 (195)
T 3cgg_A 121 LAE-DGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAFESWDLKPFVQGSEFLVAVFTKK 195 (195)
T ss_dssp SCH-HHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEESSTTCCBCCTTCSEEEEEEEEC
T ss_pred cCh-HHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeeecccccCcCCCCCcEEEEEEecC
Confidence 532 245789999999999999999975432 4677888888888887644222 111 234557777774
No 204
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.96 E-value=1.9e-09 Score=101.15 Aligned_cols=110 Identities=9% Similarity=0.104 Sum_probs=88.2
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc--cceec-cccccCCCCC-Cccceeeeccc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL--VGTYT-NWCEAMSTYP-RTYDLIHADSV 541 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl--i~~~~-~~~e~~~~yp-~t~Dlih~~~~ 541 (626)
-.+|||+|||.|.++..|++.+. +|+.+|.++.+++.+.++ |+ +.+++ |+.+ .+| .+||+|.++.+
T Consensus 36 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~---~~~~~~~D~i~~~~~ 109 (183)
T 2yxd_A 36 DDVVVDVGCGSGGMTVEIAKRCK---FVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED---VLDKLEFNKAFIGGT 109 (183)
T ss_dssp TCEEEEESCCCSHHHHHHHTTSS---EEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH---HGGGCCCSEEEECSC
T ss_pred CCEEEEeCCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc---cccCCCCcEEEECCc
Confidence 45899999999999999998544 889999998999988876 33 33333 3333 344 79999999766
Q ss_pred cccCCCCCCHHHHHHHhhhhccCCcEEEEEc-ChHHHHHHHHHHHhCCCeeEEe
Q 006905 542 FSLYKDRCETEDILLEMDRILRPEGGVIFRD-DVDELVKVKRIIDALKWQSQIV 594 (626)
Q Consensus 542 f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d-~~~~~~~~~~~~~~l~w~~~~~ 594 (626)
.++..+|.++.|+ |||.+++.+ ..+...++.+.++...|++..+
T Consensus 110 -------~~~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 110 -------KNIEKIIEILDKK--KINHIVANTIVLENAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp -------SCHHHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHTTCEEEEE
T ss_pred -------ccHHHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHcCCeEEEE
Confidence 4678999999999 999999987 5567888888999988988865
No 205
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.95 E-value=3.2e-09 Score=104.40 Aligned_cols=138 Identities=16% Similarity=0.078 Sum_probs=99.0
Q ss_pred ceeEEeccCc-hhhHhhhhhCC-CeEEEEeccCccCcccHHHHHHh----cc-cceeccccccCCCCC-Cccceeeeccc
Q 006905 470 YRNILDMNAH-LGGFAAALIDF-PVWVMNVVPAEAKINTLGVIYER----GL-VGTYTNWCEAMSTYP-RTYDLIHADSV 541 (626)
Q Consensus 470 ~r~vlD~g~g-~G~faa~l~~~-~v~~mnv~~~~~~~~~l~~~~~r----gl-i~~~~~~~e~~~~yp-~t~Dlih~~~~ 541 (626)
-.+|||+||| .|.++..|++. +. +|+.+|.++.+++.+.++ |+ +.+++.-.+.+..+| .+||+|.++-.
T Consensus 56 ~~~vLDlG~G~~G~~~~~la~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp 132 (230)
T 3evz_A 56 GEVALEIGTGHTAMMALMAEKFFNC---KVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPP 132 (230)
T ss_dssp SCEEEEECCTTTCHHHHHHHHHHCC---EEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCC
T ss_pred CCEEEEcCCCHHHHHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCC
Confidence 4679999999 99999999887 44 799999999999988765 33 334432122355666 89999999866
Q ss_pred cccCCC----------------CCCHHHHHHHhhhhccCCcEEEEE--cChHHHHHHHHHHHhCCCeeEEeecCCCCCCc
Q 006905 542 FSLYKD----------------RCETEDILLEMDRILRPEGGVIFR--DDVDELVKVKRIIDALKWQSQIVDHEDGPLER 603 (626)
Q Consensus 542 f~~~~~----------------~c~~~~~l~E~dRiLRPgG~~i~~--d~~~~~~~~~~~~~~l~w~~~~~~~e~~~~~~ 603 (626)
|..... ...+..+|.++.|+|||||++++. ...+....+.+.++...|++.......|. .-
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~g~-~~ 211 (230)
T 3evz_A 133 YYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERGIKLGYSVKDIKFKVGT-RW 211 (230)
T ss_dssp CC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTTCEEEEEEECCCC--C
T ss_pred CcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHHHHcCCceEEEEecCCC-eE
Confidence 654322 111467999999999999999984 33466788889999999988876655443 33
Q ss_pred ceEEEEEe
Q 006905 604 EKLLFAVK 611 (626)
Q Consensus 604 e~~l~~~K 611 (626)
-.+|+.+|
T Consensus 212 ~~~l~f~~ 219 (230)
T 3evz_A 212 RHSLIFFK 219 (230)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 45666655
No 206
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.95 E-value=2.3e-09 Score=113.60 Aligned_cols=100 Identities=20% Similarity=0.264 Sum_probs=73.4
Q ss_pred CCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccccCCCCCCCeeEEEeccc
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAERLPYPSRAFDMAHCSRC 284 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~Lpf~d~sFDlV~~~~~ 284 (626)
...+|||||||+|.++..++++ .++++|+ +..+..+..+ ....++ .+.+..+|... +++. .||+|++..+
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~v 257 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRR-FADAGLADRVTVAEGDFFK-PLPV-TADVVLLSFV 257 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHH-HHHTTCTTTEEEEECCTTS-CCSC-CEEEEEEESC
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHH-HHhcCCCCceEEEeCCCCC-cCCC-CCCEEEEecc
Confidence 3569999999999999999875 4666776 5444333322 223344 47777777644 4443 3999999999
Q ss_pred cccccccH-HHHHHHHHhcccCCeEEEEEeC
Q 006905 285 LIPWNQFG-GIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 285 l~h~~~~~-~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+++|.+.. ..+|+++.++|||||++++...
T Consensus 258 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 258 LLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 98887643 5899999999999999999765
No 207
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.95 E-value=1.5e-09 Score=111.04 Aligned_cols=99 Identities=13% Similarity=0.117 Sum_probs=77.8
Q ss_pred CceeEEeccCchhhHhhhhhCC---CeEEEEeccCccCcccHHHHHHhcc-----cceeccccccCCCCCCccceeeecc
Q 006905 469 RYRNILDMNAHLGGFAAALIDF---PVWVMNVVPAEAKINTLGVIYERGL-----VGTYTNWCEAMSTYPRTYDLIHADS 540 (626)
Q Consensus 469 ~~r~vlD~g~g~G~faa~l~~~---~v~~mnv~~~~~~~~~l~~~~~rgl-----i~~~~~~~e~~~~yp~t~Dlih~~~ 540 (626)
.-.+|||+|||+|.++..|++. +. +|+.+|.++.+++.+.++-- +....+=.+.+ +++.+||+|++..
T Consensus 22 ~~~~vLDiGcG~G~~~~~l~~~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~ 97 (284)
T 3gu3_A 22 KPVHIVDYGCGYGYLGLVLMPLLPEGS---KYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEI-ELNDKYDIAICHA 97 (284)
T ss_dssp SCCEEEEETCTTTHHHHHHTTTSCTTC---EEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTC-CCSSCEEEEEEES
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhc-CcCCCeeEEEECC
Confidence 3578999999999999999887 34 78999999899998887621 22333212222 2358999999999
Q ss_pred ccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh
Q 006905 541 VFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV 574 (626)
Q Consensus 541 ~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~ 574 (626)
++.+.. +.+.+|.++.|+|||||++++.+..
T Consensus 98 ~l~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 98 FLLHMT---TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp CGGGCS---SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hhhcCC---CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 999886 4589999999999999999998654
No 208
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.95 E-value=1.1e-09 Score=110.92 Aligned_cols=142 Identities=8% Similarity=-0.011 Sum_probs=95.2
Q ss_pred CceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhc-----c----------------------------
Q 006905 469 RYRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERG-----L---------------------------- 515 (626)
Q Consensus 469 ~~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rg-----l---------------------------- 515 (626)
.-.+|||+|||+|.++..++..++ -+|+.+|.++.|++.+.++- -
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~~~--~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACDSF--QDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHhhh--cceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 356799999999999888888875 37999999999999876531 0
Q ss_pred --cc-eec-cccc--cCCCC-CCccceeeeccccccC-CCCCCHHHHHHHhhhhccCCcEEEEEcChH------------
Q 006905 516 --VG-TYT-NWCE--AMSTY-PRTYDLIHADSVFSLY-KDRCETEDILLEMDRILRPEGGVIFRDDVD------------ 575 (626)
Q Consensus 516 --i~-~~~-~~~e--~~~~y-p~t~Dlih~~~~f~~~-~~~c~~~~~l~E~dRiLRPgG~~i~~d~~~------------ 575 (626)
|. ++. |..+ .+... ..+||+|.|..++.+. .+.-++..+|.+|.|+|||||+|++++...
T Consensus 133 ~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~ 212 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFS 212 (263)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEE
T ss_pred hhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEee
Confidence 10 111 2222 11112 2699999999999874 333356789999999999999999985211
Q ss_pred ----HHHHHHHHHHhCCCeeEEeecC---CCC----CCcceEEEEEec
Q 006905 576 ----ELVKVKRIIDALKWQSQIVDHE---DGP----LEREKLLFAVKL 612 (626)
Q Consensus 576 ----~~~~~~~~~~~l~w~~~~~~~e---~~~----~~~e~~l~~~K~ 612 (626)
..+.+.+++..-..++.....- ..+ ....-+++|+|.
T Consensus 213 ~~~~~~~~l~~~l~~aGF~i~~~~~~~~~~~~~~~~~~~~~~~~a~K~ 260 (263)
T 2a14_A 213 CVALEKGEVEQAVLDAGFDIEQLLHSPQSYSVTNAANNGVCCIVARKK 260 (263)
T ss_dssp CCCCCHHHHHHHHHHTTEEEEEEEEECCCCCTTTCCCCCEEEEEEEEC
T ss_pred ccccCHHHHHHHHHHCCCEEEEEeecccccccccCCCCceEEEEEEec
Confidence 3557777777766665432211 000 113346788885
No 209
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.95 E-value=3.5e-09 Score=104.43 Aligned_cols=94 Identities=18% Similarity=0.314 Sum_probs=75.5
Q ss_pred eeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc-----cceeccccccCCC--CCCccceeeecc-cc
Q 006905 471 RNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL-----VGTYTNWCEAMST--YPRTYDLIHADS-VF 542 (626)
Q Consensus 471 r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl-----i~~~~~~~e~~~~--yp~t~Dlih~~~-~f 542 (626)
.+|||+|||.|.++..|++. .+|+.+|.++.+++.+.++.- +...+ ..+.. ++.+||+|.+.. ++
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~---~d~~~~~~~~~fD~v~~~~~~~ 107 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETNRHVDFWV---QDMRELELPEPVDAITILCDSL 107 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTTCCCEEEE---CCGGGCCCSSCEEEEEECTTGG
T ss_pred CeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcCCceEEEE---cChhhcCCCCCcCEEEEeCCch
Confidence 68999999999999999988 389999999999999887632 23333 22222 358999999986 88
Q ss_pred ccCCCCCCHHHHHHHhhhhccCCcEEEEE
Q 006905 543 SLYKDRCETEDILLEMDRILRPEGGVIFR 571 (626)
Q Consensus 543 ~~~~~~c~~~~~l~E~dRiLRPgG~~i~~ 571 (626)
.+..+..+...+|.++.|+|||||.+++.
T Consensus 108 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 108 NYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp GGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 88765556778999999999999999983
No 210
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.95 E-value=1.5e-09 Score=114.56 Aligned_cols=113 Identities=12% Similarity=0.078 Sum_probs=80.6
Q ss_pred HHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCC
Q 006905 197 YIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYP 272 (626)
Q Consensus 197 yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~ 272 (626)
..+.+.+.+.... ..+|||+|||+|.++..++++ .++++|+++.++..+..+ ....++...+...|... +.
T Consensus 184 ~~~~ll~~l~~~~--~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~-~~~~~~~~~~~~~d~~~--~~ 258 (343)
T 2pjd_A 184 GSQLLLSTLTPHT--KGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRAT-LAANGVEGEVFASNVFS--EV 258 (343)
T ss_dssp HHHHHHHHSCTTC--CSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHH-HHHTTCCCEEEECSTTT--TC
T ss_pred HHHHHHHhcCcCC--CCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH-HHHhCCCCEEEEccccc--cc
Confidence 3344555553222 448999999999999998875 589999987655544433 33456666666666544 34
Q ss_pred CCCeeEEEeccccccc----cccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 273 SRAFDMAHCSRCLIPW----NQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 273 d~sFDlV~~~~~l~h~----~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+++||+|+++..+++. ......++.++.|+|||||.+++..+
T Consensus 259 ~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 259 KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 6799999999988541 22337899999999999999999864
No 211
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.95 E-value=3.8e-09 Score=110.95 Aligned_cols=114 Identities=15% Similarity=0.157 Sum_probs=81.7
Q ss_pred HHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccccC
Q 006905 195 DAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAERL 269 (626)
Q Consensus 195 ~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~L 269 (626)
..|.+.|.+.+.... +.+|||||||+|.++..++++ .|+++|+++ ++.. +.+.+...+. .+.+..++...+
T Consensus 24 ~~y~~ai~~~~~~~~--~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~-~~~~-a~~~~~~~~~~~~i~~~~~d~~~~ 99 (328)
T 1g6q_1 24 LSYRNAIIQNKDLFK--DKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSS-IIEM-AKELVELNGFSDKITLLRGKLEDV 99 (328)
T ss_dssp HHHHHHHHHHHHHHT--TCEEEEETCTTSHHHHHHHHTCCSEEEEEESST-HHHH-HHHHHHHTTCTTTEEEEESCTTTS
T ss_pred HHHHHHHHhhHhhcC--CCEEEEecCccHHHHHHHHHCCCCEEEEEChHH-HHHH-HHHHHHHcCCCCCEEEEECchhhc
Confidence 344445544444333 458999999999999998886 588999984 4433 3344445554 367788888888
Q ss_pred CCCCCCeeEEEecccccc--ccccHHHHHHHHHhcccCCeEEEEE
Q 006905 270 PYPSRAFDMAHCSRCLIP--WNQFGGIYLIEVDRVLRPGGYWILS 312 (626)
Q Consensus 270 pf~d~sFDlV~~~~~l~h--~~~~~~~~L~Ei~RvLKPGG~lvis 312 (626)
++++++||+|++....++ .......++.++.|+|||||.++..
T Consensus 100 ~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 100 HLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp CCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred cCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 888889999999754322 2334578999999999999999843
No 212
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.94 E-value=1e-09 Score=108.36 Aligned_cols=98 Identities=14% Similarity=0.211 Sum_probs=78.4
Q ss_pred CceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc---cceeccccccCCCCC-Cccceeeecccccc
Q 006905 469 RYRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL---VGTYTNWCEAMSTYP-RTYDLIHADSVFSL 544 (626)
Q Consensus 469 ~~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl---i~~~~~~~e~~~~yp-~t~Dlih~~~~f~~ 544 (626)
.-.+|||+|||.|.++..|++.+.- +|+.+|.++.+++.+.++.- +...+.-.+.+. +| .+||+|.+..++.+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~ 119 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGAS--YVLGLDLSEKMLARARAAGPDTGITYERADLDKLH-LPQDSFDLAYSSLALHY 119 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCC-CCTTCEEEEEEESCGGG
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCCC--eEEEEcCCHHHHHHHHHhcccCCceEEEcChhhcc-CCCCCceEEEEeccccc
Confidence 3568999999999999999988642 78899999999999998863 233332122222 44 89999999999988
Q ss_pred CCCCCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 545 YKDRCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 545 ~~~~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
.. +...+|.++.|+|||||.+++.+
T Consensus 120 ~~---~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 120 VE---DVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp CS---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cc---hHHHHHHHHHHhcCcCcEEEEEe
Confidence 76 56899999999999999999975
No 213
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.94 E-value=5.6e-10 Score=113.26 Aligned_cols=121 Identities=13% Similarity=0.080 Sum_probs=89.0
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhccc--------------------ceeccccccCCCC
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGLV--------------------GTYTNWCEAMSTY 529 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgli--------------------~~~~~~~e~~~~y 529 (626)
-..|||+|||.|.++.+|++++. +|+++|.++.+++.+.++.-. ..+.-.|..+..+
T Consensus 69 ~~~vLD~GCG~G~~~~~La~~G~---~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 69 GLRVFFPLCGKAIEMKWFADRGH---TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp SCEEEETTCTTCTHHHHHHHTTC---EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCeEEEeCCCCcHHHHHHHHCCC---eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 35799999999999999999986 899999999999999765311 1112223444444
Q ss_pred C----CccceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEE-EcC-----------hHHHHHHHHHHHhCCCeeEE
Q 006905 530 P----RTYDLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIF-RDD-----------VDELVKVKRIIDALKWQSQI 593 (626)
Q Consensus 530 p----~t~Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~-~d~-----------~~~~~~~~~~~~~l~w~~~~ 593 (626)
| .+||+|.+..+|.+... .+.+.++.||.|+|||||.+++ +-. .-..+.++.++.. .|++..
T Consensus 146 ~~~~~~~FD~V~~~~~l~~l~~-~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~v~~ 223 (252)
T 2gb4_A 146 PRANIGKFDRIWDRGALVAINP-GDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCSMQC 223 (252)
T ss_dssp GGGCCCCEEEEEESSSTTTSCG-GGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEEEEE
T ss_pred CcccCCCEEEEEEhhhhhhCCH-HHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-CeEEEE
Confidence 3 79999999988887753 4667899999999999999964 210 0124677777776 477764
Q ss_pred ee
Q 006905 594 VD 595 (626)
Q Consensus 594 ~~ 595 (626)
..
T Consensus 224 ~~ 225 (252)
T 2gb4_A 224 LE 225 (252)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 214
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.94 E-value=4.8e-10 Score=112.12 Aligned_cols=101 Identities=16% Similarity=0.146 Sum_probs=76.9
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc-----cceec-cccccCCCCC-Cccceeeecccc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL-----VGTYT-NWCEAMSTYP-RTYDLIHADSVF 542 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl-----i~~~~-~~~e~~~~yp-~t~Dlih~~~~f 542 (626)
-..|||+|||.|.++.+|++... -+|+.+|.++.+++.+.++.- +.++. +|-+-...+| .+||.|..+.+.
T Consensus 61 G~rVLdiG~G~G~~~~~~~~~~~--~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~ 138 (236)
T 3orh_A 61 GGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYP 138 (236)
T ss_dssp CEEEEEECCTTSHHHHHHTTSCE--EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCC
T ss_pred CCeEEEECCCccHHHHHHHHhCC--cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeee
Confidence 45799999999999999998754 378899999999999988653 22222 4544555677 899999876655
Q ss_pred ccCC--CCCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 543 SLYK--DRCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 543 ~~~~--~~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
+... +.-+.+.++.|+.|||||||.|++-+
T Consensus 139 ~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 139 LSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred cccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 5332 22345789999999999999999853
No 215
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.94 E-value=4.1e-10 Score=108.58 Aligned_cols=116 Identities=12% Similarity=0.051 Sum_probs=67.6
Q ss_pred HHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCC
Q 006905 195 DAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLP 270 (626)
Q Consensus 195 ~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lp 270 (626)
...++.+.+.+... .++.+|||+|||+|.++..+++. .++++|+++.++..+..+.. ..+..+.+..+|... +
T Consensus 15 ~~~~~~~~~~l~~~-~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~~~~~d~~~-~ 91 (215)
T 4dzr_A 15 EVLVEEAIRFLKRM-PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAE-RFGAVVDWAAADGIE-W 91 (215)
T ss_dssp HHHHHHHHHHHTTC-CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------------------CCHHHHHH-H
T ss_pred HHHHHHHHHHhhhc-CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHH-HhCCceEEEEcchHh-h
Confidence 33445555555321 33568999999999999998886 58889988865554333222 223345556666554 5
Q ss_pred CCC-----CCeeEEEecccccccccc-------------------------HHHHHHHHHhcccCCeE-EEEEe
Q 006905 271 YPS-----RAFDMAHCSRCLIPWNQF-------------------------GGIYLIEVDRVLRPGGY-WILSG 313 (626)
Q Consensus 271 f~d-----~sFDlV~~~~~l~h~~~~-------------------------~~~~L~Ei~RvLKPGG~-lvis~ 313 (626)
+++ ++||+|+++..+++.... ...++.++.++|||||+ +++..
T Consensus 92 ~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 165 (215)
T 4dzr_A 92 LIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEV 165 (215)
T ss_dssp HHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEEC
T ss_pred hhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 554 899999997655332210 05678899999999999 55553
No 216
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.93 E-value=5e-09 Score=102.38 Aligned_cols=110 Identities=8% Similarity=0.036 Sum_probs=84.3
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc---cceeccccccCCC-CC--Cccceeeec
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL---VGTYTNWCEAMST-YP--RTYDLIHAD 539 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~~~~e~~~~-yp--~t~Dlih~~ 539 (626)
-.+|||+|||+|.++..|++.+. .|+.+|.++.+++.+.++ |+ +.+++ ..+.. .+ ..||+|.+.
T Consensus 56 ~~~vLDlGcG~G~~~~~la~~~~---~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~---~d~~~~~~~~~~~D~v~~~ 129 (204)
T 3njr_A 56 GELLWDIGGGSGSVSVEWCLAGG---RAITIEPRADRIENIQKNIDTYGLSPRMRAVQ---GTAPAALADLPLPEAVFIG 129 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE---SCTTGGGTTSCCCSEEEEC
T ss_pred CCEEEEecCCCCHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEe---CchhhhcccCCCCCEEEEC
Confidence 46899999999999999998854 799999999999988776 33 23333 22222 22 579999985
Q ss_pred cccccCCCCCCHHHHHHHhhhhccCCcEEEEEc-ChHHHHHHHHHHHhCCCeeEE
Q 006905 540 SVFSLYKDRCETEDILLEMDRILRPEGGVIFRD-DVDELVKVKRIIDALKWQSQI 593 (626)
Q Consensus 540 ~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d-~~~~~~~~~~~~~~l~w~~~~ 593 (626)
..+ +.+ +|.++.|+|||||.+++.. ..+...++.+.++...+++.-
T Consensus 130 ~~~-------~~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g~~i~~ 176 (204)
T 3njr_A 130 GGG-------SQA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARHGGQLLR 176 (204)
T ss_dssp SCC-------CHH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHHCSEEEE
T ss_pred Ccc-------cHH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhCCCcEEE
Confidence 532 456 9999999999999999975 456778888888887777653
No 217
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.93 E-value=6.9e-10 Score=108.06 Aligned_cols=98 Identities=10% Similarity=0.115 Sum_probs=72.8
Q ss_pred CCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCCCeeEEEecccccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSRAFDMAHCSRCLIP 287 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h 287 (626)
..+|||+|||+|.++..++.. .++++|+++.++.-+..+ +...|+...+.+.|.... .+.++||+|.+..++|+
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~-~~~~g~~~~v~~~d~~~~-~~~~~~DvVLa~k~LHl 127 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSI-IGKLKTTIKYRFLNKESD-VYKGTYDVVFLLKMLPV 127 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHH-HHHSCCSSEEEEECCHHH-HTTSEEEEEEEETCHHH
T ss_pred CCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHH-HHhcCCCccEEEeccccc-CCCCCcChhhHhhHHHh
Confidence 558999999999999999654 688888877666544433 334566644444554333 35678999999999977
Q ss_pred ccccHHHHHHHHHhcccCCeEEEEE
Q 006905 288 WNQFGGIYLIEVDRVLRPGGYWILS 312 (626)
Q Consensus 288 ~~~~~~~~L~Ei~RvLKPGG~lvis 312 (626)
. ++....+.++.+.|||||+||--
T Consensus 128 L-~~~~~al~~v~~~L~pggvfISf 151 (200)
T 3fzg_A 128 L-KQQDVNILDFLQLFHTQNFVISF 151 (200)
T ss_dssp H-HHTTCCHHHHHHTCEEEEEEEEE
T ss_pred h-hhhHHHHHHHHHHhCCCCEEEEe
Confidence 7 65567777999999999988664
No 218
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.93 E-value=1.7e-09 Score=109.00 Aligned_cols=119 Identities=19% Similarity=0.290 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcccceeccccccCC
Q 006905 448 ELWKKRLSYYKTMNNQLGQSGRYRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGLVGTYTNWCEAMS 527 (626)
Q Consensus 448 ~~w~~~v~~y~~~~~~~~~~~~~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgli~~~~~~~e~~~ 527 (626)
..|+........++..+.. .-.+|||+|||.|.++..|++.+. +|+.+|.++.+++.+.++..-.....-.+.++
T Consensus 35 ~~~~~~~~~~~~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~ 109 (260)
T 2avn_A 35 PKWKLYHRLIGSFLEEYLK--NPCRVLDLGGGTGKWSLFLQERGF---EVVLVDPSKEMLEVAREKGVKNVVEAKAEDLP 109 (260)
T ss_dssp HHHHHHHHHHHHHHHHHCC--SCCEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHHTCSCEEECCTTSCC
T ss_pred cchhHHHHHHHHHHHHhcC--CCCeEEEeCCCcCHHHHHHHHcCC---eEEEEeCCHHHHHHHHhhcCCCEEECcHHHCC
Confidence 4554333333444433222 245899999999999999999875 89999999999999999865112221112222
Q ss_pred CCC-CccceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh
Q 006905 528 TYP-RTYDLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV 574 (626)
Q Consensus 528 ~yp-~t~Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~ 574 (626)
+| .+||+|.+..++.++.. +...+|.|+.|+|||||.+++....
T Consensus 110 -~~~~~fD~v~~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 110 -FPSGAFEAVLALGDVLSYVE--NKDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp -SCTTCEEEEEECSSHHHHCS--CHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred -CCCCCEEEEEEcchhhhccc--cHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 44 89999999876665532 3789999999999999999997543
No 219
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.93 E-value=9.2e-10 Score=112.48 Aligned_cols=118 Identities=10% Similarity=0.024 Sum_probs=84.9
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcccceec-cccccC----CCCCCccceeeecccccc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGLVGTYT-NWCEAM----STYPRTYDLIHADSVFSL 544 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgli~~~~-~~~e~~----~~yp~t~Dlih~~~~f~~ 544 (626)
-.+|||+|||+|.++..|++++. .|+.+|.++.|++.+.++.--..++ +|.+.- ...+.+||+|.|+.++.+
T Consensus 46 g~~VLDlGcGtG~~a~~La~~g~---~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~ 122 (261)
T 3iv6_A 46 GSTVAVIGASTRFLIEKALERGA---SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFDFVLNDRLINR 122 (261)
T ss_dssp TCEEEEECTTCHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSEEEEESCGGG
T ss_pred cCEEEEEeCcchHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCccEEEEhhhhHh
Confidence 46899999999999999999875 7999999999999999875322122 232211 122479999999999987
Q ss_pred CCCCCCHHHHHHHhhhhccCCcEEEEEcCh----HHHHHHHHHHHhCCCeeE
Q 006905 545 YKDRCETEDILLEMDRILRPEGGVIFRDDV----DELVKVKRIIDALKWQSQ 592 (626)
Q Consensus 545 ~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~----~~~~~~~~~~~~l~w~~~ 592 (626)
+... +...+|.+|.|+| |||.++++-.. .....++.....-.|...
T Consensus 123 ~~~~-~~~~~l~~l~~lL-PGG~l~lS~~~g~~~~d~~~l~~~~~~g~~~~~ 172 (261)
T 3iv6_A 123 FTTE-EARRACLGMLSLV-GSGTVRASVKLGFYDIDLKLIEYGEQSGTLAKF 172 (261)
T ss_dssp SCHH-HHHHHHHHHHHHH-TTSEEEEEEEBSCCHHHHHHHHHHHTTTCHHHH
T ss_pred CCHH-HHHHHHHHHHHhC-cCcEEEEEeccCcccccHHHHHHHHhcCCeeee
Confidence 7532 4577999999999 99999998432 123334444455555443
No 220
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.93 E-value=3e-09 Score=111.87 Aligned_cols=100 Identities=17% Similarity=0.189 Sum_probs=75.9
Q ss_pred CCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccccCC-CCCCCeeEEEeccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAERLP-YPSRAFDMAHCSRC 284 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~Lp-f~d~sFDlV~~~~~ 284 (626)
..+|||||||+|.++..++++ .++++|+ +..+..+. +.....+. .+.+..+|....+ +..+.||+|++..+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~v 257 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAAR-KTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDC 257 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHH-HHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESC
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHH-HHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEecc
Confidence 569999999999999999875 5777888 54444333 33334444 3677777876655 23456999999999
Q ss_pred cccccccH-HHHHHHHHhcccCCeEEEEEe
Q 006905 285 LIPWNQFG-GIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 285 l~h~~~~~-~~~L~Ei~RvLKPGG~lvis~ 313 (626)
+|+|.+.. ..+|+++.++|||||++++..
T Consensus 258 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 258 LHYFDAREAREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp GGGSCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 98887532 789999999999999999975
No 221
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.93 E-value=5.8e-09 Score=102.46 Aligned_cols=109 Identities=16% Similarity=0.078 Sum_probs=76.5
Q ss_pred HHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcC------CCeEEEEccccc
Q 006905 200 DIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERG------VPALIGVLAAER 268 (626)
Q Consensus 200 ~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg------~~~~~~v~d~~~ 268 (626)
.+.+.+.....++.+|||||||+|.++..|++. .++++|+++..+..+..+.. ..+ ..+.+...|...
T Consensus 66 ~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~~~v~~~~~d~~~ 144 (226)
T 1i1n_A 66 YALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVR-KDDPTLLSSGRVQLVVGDGRM 144 (226)
T ss_dssp HHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHH-HHCTHHHHTSSEEEEESCGGG
T ss_pred HHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHH-hhcccccCCCcEEEEECCccc
Confidence 444454422334569999999999999888764 58889988765554433332 222 246777777766
Q ss_pred CCCCCCCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCCC
Q 006905 269 LPYPSRAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGPPI 316 (626)
Q Consensus 269 Lpf~d~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~pp~ 316 (626)
.+..+++||+|++...+++. +.++.++|||||.++++..+.
T Consensus 145 ~~~~~~~fD~i~~~~~~~~~-------~~~~~~~LkpgG~lv~~~~~~ 185 (226)
T 1i1n_A 145 GYAEEAPYDAIHVGAAAPVV-------PQALIDQLKPGGRLILPVGPA 185 (226)
T ss_dssp CCGGGCCEEEEEECSBBSSC-------CHHHHHTEEEEEEEEEEESCT
T ss_pred CcccCCCcCEEEECCchHHH-------HHHHHHhcCCCcEEEEEEecC
Confidence 65557789999998877443 367899999999999987543
No 222
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.93 E-value=1.4e-09 Score=108.38 Aligned_cols=114 Identities=15% Similarity=0.221 Sum_probs=80.5
Q ss_pred HHHHHHHHHhhhhcCCCCCceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhc----c-cceecccccc
Q 006905 451 KKRLSYYKTMNNQLGQSGRYRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERG----L-VGTYTNWCEA 525 (626)
Q Consensus 451 ~~~v~~y~~~~~~~~~~~~~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rg----l-i~~~~~~~e~ 525 (626)
...+.....++..+.. ....+|||+|||.|.++..|++.+. +|+.+|.++.+++.+.++. + +..++ ..
T Consensus 24 ~~~~~~~~~~~~~~~~-~~~~~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~---~d 96 (252)
T 1wzn_A 24 KAEIDFVEEIFKEDAK-REVRRVLDLACGTGIPTLELAERGY---EVVGLDLHEEMLRVARRKAKERNLKIEFLQ---GD 96 (252)
T ss_dssp HHHHHHHHHHHHHTCS-SCCCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEE---SC
T ss_pred HHHHHHHHHHHHHhcc-cCCCEEEEeCCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEE---CC
Confidence 3334444455544433 3356899999999999999999876 8999999999999887753 2 23333 22
Q ss_pred CCC--CCCccceeeecc-ccccCCCCCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 526 MST--YPRTYDLIHADS-VFSLYKDRCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 526 ~~~--yp~t~Dlih~~~-~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
+.. ++.+||+|.+.. .+.+. +.-+...+|.++.|+|||||.+++.-
T Consensus 97 ~~~~~~~~~fD~v~~~~~~~~~~-~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 97 VLEIAFKNEFDAVTMFFSTIMYF-DEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp GGGCCCCSCEEEEEECSSGGGGS-CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhcccCCCccEEEEcCCchhcC-CHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 222 358999999853 33333 22356789999999999999999854
No 223
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.92 E-value=1.6e-09 Score=104.77 Aligned_cols=115 Identities=18% Similarity=0.255 Sum_probs=88.9
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc--cceeccccccCCCC-CCccceeeecccc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL--VGTYTNWCEAMSTY-PRTYDLIHADSVF 542 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl--i~~~~~~~e~~~~y-p~t~Dlih~~~~f 542 (626)
-.+|||+|||.|.++..|++.+. .+|+.+|.++.+++.+.++ |+ +.+.+ ..+..+ +.+||+|.++.++
T Consensus 61 ~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~---~d~~~~~~~~fD~i~~~~~~ 135 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAHKLGA--KSVLATDISDESMTAAEENAALNGIYDIALQK---TSLLADVDGKFDLIVANILA 135 (205)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCCCEEEE---SSTTTTCCSCEEEEEEESCH
T ss_pred CCEEEEECCCCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEe---ccccccCCCCceEEEECCcH
Confidence 35799999999999999998764 3789999999999988876 43 23333 333334 4999999998766
Q ss_pred ccCCCCCCHHHHHHHhhhhccCCcEEEEEcC-hHHHHHHHHHHHhCCCeeEEee
Q 006905 543 SLYKDRCETEDILLEMDRILRPEGGVIFRDD-VDELVKVKRIIDALKWQSQIVD 595 (626)
Q Consensus 543 ~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~-~~~~~~~~~~~~~l~w~~~~~~ 595 (626)
.+ +..+|.++.|+|||||++++.+. .+....+.+++....++.....
T Consensus 136 ~~------~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~~~~~ 183 (205)
T 3grz_A 136 EI------LLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQIDLKM 183 (205)
T ss_dssp HH------HHHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEEEEEE
T ss_pred HH------HHHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcCCceEEee
Confidence 43 47889999999999999999753 3457778888888888776443
No 224
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.92 E-value=6.5e-10 Score=115.69 Aligned_cols=103 Identities=9% Similarity=0.071 Sum_probs=75.3
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc-cc-----------eecccc------ccCC-CCC
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL-VG-----------TYTNWC------EAMS-TYP 530 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl-i~-----------~~~~~~------e~~~-~yp 530 (626)
-.+|||+|||.|+....++..+.. +|+++|.++.|++.|.+|.- .+ .....+ +.+. .+|
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~~~--~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGEIA--LLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCeEEEEecCCcHhHHHHHhcCCC--eEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 457999999999877766655533 79999999999999998742 11 111111 2222 355
Q ss_pred -CccceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh
Q 006905 531 -RTYDLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV 574 (626)
Q Consensus 531 -~t~Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~ 574 (626)
++||+|-|..++.+.-+.-+...+|.|+.|+|||||+||++...
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 89999999888765422235689999999999999999998654
No 225
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.92 E-value=4.3e-09 Score=101.20 Aligned_cols=90 Identities=17% Similarity=0.180 Sum_probs=67.4
Q ss_pred CCEEEEeCCCCchHHHHHhhC------CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCC---------------
Q 006905 212 IRTAIDTGCGVASWGAYLLSR------NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLP--------------- 270 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~------~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lp--------------- 270 (626)
+.+|||+|||+|.++..++++ .++++|+++... ...+.+..+|...++
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~-----------~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~ 91 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDP-----------IPNVYFIQGEIGKDNMNNIKNINYIDNMNN 91 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCC-----------CTTCEEEECCTTTTSSCCC-----------
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCC-----------CCCceEEEccccchhhhhhccccccccccc
Confidence 458999999999999998864 488999987311 123566677776665
Q ss_pred ----------CCCCCeeEEEecccccccc----ccH-------HHHHHHHHhcccCCeEEEEEe
Q 006905 271 ----------YPSRAFDMAHCSRCLIPWN----QFG-------GIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 271 ----------f~d~sFDlV~~~~~l~h~~----~~~-------~~~L~Ei~RvLKPGG~lvis~ 313 (626)
+++++||+|+|..++ |+. .+. ..++.++.++|||||.|++..
T Consensus 92 ~~~~~~~~~~~~~~~fD~v~~~~~~-~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 154 (201)
T 2plw_A 92 NSVDYKLKEILQDKKIDIILSDAAV-PCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKM 154 (201)
T ss_dssp CHHHHHHHHHHTTCCEEEEEECCCC-CCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhHHHHHhhcCCCcccEEEeCCCc-CCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 567799999998876 332 111 137899999999999999964
No 226
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.92 E-value=4.4e-09 Score=107.84 Aligned_cols=126 Identities=10% Similarity=0.033 Sum_probs=85.8
Q ss_pred CCceecCCCCCCCCCcHHHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--C-cEEEeCCccchHHHHHHHHHH
Q 006905 178 GDRFRFPGGGTMFPNGADAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--N-IITMSFAPRDTHEAQVQFALE 254 (626)
Q Consensus 178 ge~~~Fp~ggt~F~~ga~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~-V~avdis~~dls~a~i~~A~e 254 (626)
|-.|.+.-....|..........+.+++ . ++.+|||+|||+|.++..+++. . |+++|+++.++..+.. .+..
T Consensus 96 g~~f~~d~~~~~f~~~~~~~~~~l~~~~--~--~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~-n~~~ 170 (278)
T 2frn_A 96 GIKYKLDVAKIMFSPANVKERVRMAKVA--K--PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVE-NIHL 170 (278)
T ss_dssp TEEEEEETTTSCCCGGGHHHHHHHHHHC--C--TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHH-HHHH
T ss_pred CEEEEEEccceeEcCCcHHHHHHHHHhC--C--CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHHH
Confidence 3334443223344444334444455443 2 2458999999999999999875 3 8899998866554443 3444
Q ss_pred cCCC--eEEEEcccccCCCCCCCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 255 RGVP--ALIGVLAAERLPYPSRAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 255 rg~~--~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+++. +.+..+|+..++. +++||+|++.... ....++.++.++|||||.+++...
T Consensus 171 n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p~-----~~~~~l~~~~~~LkpgG~l~~~~~ 226 (278)
T 2frn_A 171 NKVEDRMSAYNMDNRDFPG-ENIADRILMGYVV-----RTHEFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp TTCTTTEEEECSCTTTCCC-CSCEEEEEECCCS-----SGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred cCCCceEEEEECCHHHhcc-cCCccEEEECCch-----hHHHHHHHHHHHCCCCeEEEEEEe
Confidence 5554 6678888877776 7789999996532 235789999999999999999753
No 227
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.92 E-value=3.6e-09 Score=102.26 Aligned_cols=96 Identities=13% Similarity=-0.016 Sum_probs=71.4
Q ss_pred CCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCCC-eEEEEcccccCCCCCCCeeEEEeccccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGVP-ALIGVLAAERLPYPSRAFDMAHCSRCLI 286 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~~-~~~~v~d~~~Lpf~d~sFDlV~~~~~l~ 286 (626)
+.+|||+|||+|.++..++.. .++++|+++..+..+.. .+...+.. +.+...|...++ ++++||+|+++. +
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~-~- 141 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQ-VQHELKLENIEPVQSRVEEFP-SEPPFDGVISRA-F- 141 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHH-HHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSC-S-
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-HHHHcCCCCeEEEecchhhCC-ccCCcCEEEEec-c-
Confidence 458999999999999888864 68888887755543332 33344543 677777776665 457899999854 2
Q ss_pred cccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 287 PWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 287 h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
.+...++.++.++|+|||++++...
T Consensus 142 ---~~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 142 ---ASLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp ---SSHHHHHHHHTTSEEEEEEEEEEES
T ss_pred ---CCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 2357899999999999999999843
No 228
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.91 E-value=5.6e-09 Score=104.88 Aligned_cols=110 Identities=14% Similarity=0.011 Sum_probs=75.2
Q ss_pred HHHHhhc-cCCCCCCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCC---
Q 006905 200 DIGKLIN-LNDGSIRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLP--- 270 (626)
Q Consensus 200 ~L~~ll~-l~~~~~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lp--- 270 (626)
.+...+. +...++.+|||+|||+|.++..+++. .|+++|+++.++.. .++.++++ .++.+.++|+....
T Consensus 64 ~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~-l~~~a~~r-~nv~~i~~Da~~~~~~~ 141 (232)
T 3id6_C 64 AILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRE-LLLVAQRR-PNIFPLLADARFPQSYK 141 (232)
T ss_dssp HHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHH-HHHHHHHC-TTEEEEECCTTCGGGTT
T ss_pred HHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHH-HHHHhhhc-CCeEEEEcccccchhhh
Confidence 4444443 23334669999999999999988875 59999998865432 44555554 35677777765432
Q ss_pred CCCCCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 271 YPSRAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 271 f~d~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
...++||+|++..+. ++....++..+.++|||||.|+++..
T Consensus 142 ~~~~~~D~I~~d~a~---~~~~~il~~~~~~~LkpGG~lvisik 182 (232)
T 3id6_C 142 SVVENVDVLYVDIAQ---PDQTDIAIYNAKFFLKVNGDMLLVIK 182 (232)
T ss_dssp TTCCCEEEEEECCCC---TTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccccceEEEEecCCC---hhHHHHHHHHHHHhCCCCeEEEEEEc
Confidence 224689999998654 23223445566779999999999854
No 229
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.91 E-value=5.1e-09 Score=110.48 Aligned_cols=100 Identities=19% Similarity=0.307 Sum_probs=73.6
Q ss_pred CCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccccCCCCCCCeeEEEecccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAERLPYPSRAFDMAHCSRCL 285 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~Lpf~d~sFDlV~~~~~l 285 (626)
..+|||||||+|.++..++++ .++++|+ +..+..+.. .....++ .+.+..+|... +++. .||+|++..++
T Consensus 184 ~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~vl 259 (360)
T 1tw3_A 184 VRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARS-YLKDEGLSDRVDVVEGDFFE-PLPR-KADAIILSFVL 259 (360)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHH-HHHHTTCTTTEEEEECCTTS-CCSS-CEEEEEEESCG
T ss_pred CcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHH-HHHhcCCCCceEEEeCCCCC-CCCC-CccEEEEcccc
Confidence 569999999999999998875 3556666 544443332 2333444 47777777544 3444 49999999999
Q ss_pred ccccccH-HHHHHHHHhcccCCeEEEEEeCC
Q 006905 286 IPWNQFG-GIYLIEVDRVLRPGGYWILSGPP 315 (626)
Q Consensus 286 ~h~~~~~-~~~L~Ei~RvLKPGG~lvis~pp 315 (626)
++|.+.. ..+|+++.++|||||++++..+.
T Consensus 260 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 260 LNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp GGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 8887643 58999999999999999998653
No 230
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.91 E-value=6.8e-09 Score=104.93 Aligned_cols=160 Identities=16% Similarity=0.037 Sum_probs=108.3
Q ss_pred hhHHHHHHHHHHHHhhhhcCCCCCceeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHHHh----cc--cc
Q 006905 446 NSELWKKRLSYYKTMNNQLGQSGRYRNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIYER----GL--VG 517 (626)
Q Consensus 446 d~~~w~~~v~~y~~~~~~~~~~~~~r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~r----gl--i~ 517 (626)
..+.|.+++-.-..++..+.. ..-.+|||+|||.|..+..|+.. +. .|+.+|.++.++.++.++ |+ +.
T Consensus 58 ~~~~~~~~~~ds~~~l~~~~~-~~~~~vLDiG~G~G~~~i~la~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~l~~v~ 133 (249)
T 3g89_A 58 EEEVVVKHFLDSLTLLRLPLW-QGPLRVLDLGTGAGFPGLPLKIVRPEL---ELVLVDATRKKVAFVERAIEVLGLKGAR 133 (249)
T ss_dssp HHHHHHHHHHHHHGGGGSSCC-CSSCEEEEETCTTTTTHHHHHHHCTTC---EEEEEESCHHHHHHHHHHHHHHTCSSEE
T ss_pred HHHHhhceeeechhhhccccc-CCCCEEEEEcCCCCHHHHHHHHHCCCC---EEEEEECCHHHHHHHHHHHHHhCCCceE
Confidence 456787776554444443332 34568999999999999888754 33 789999999999887765 44 44
Q ss_pred eeccccccCCC---CCCccceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcC---hHHHHHHHHHHHhCCCee
Q 006905 518 TYTNWCEAMST---YPRTYDLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDD---VDELVKVKRIIDALKWQS 591 (626)
Q Consensus 518 ~~~~~~e~~~~---yp~t~Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~---~~~~~~~~~~~~~l~w~~ 591 (626)
+++.-.+.+.. ++.+||+|.|..+ .+++.++.++.|+|||||++++-.. .+.+..++..++.+.++.
T Consensus 134 ~~~~d~~~~~~~~~~~~~fD~I~s~a~-------~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~ 206 (249)
T 3g89_A 134 ALWGRAEVLAREAGHREAYARAVARAV-------APLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRL 206 (249)
T ss_dssp EEECCHHHHTTSTTTTTCEEEEEEESS-------CCHHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEE
T ss_pred EEECcHHHhhcccccCCCceEEEECCc-------CCHHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeE
Confidence 55543344432 3489999998533 3678999999999999999998653 456677777788888876
Q ss_pred EEee-c-CCCCCCcceEEEEEecccCC
Q 006905 592 QIVD-H-EDGPLEREKLLFAVKLYWTA 616 (626)
Q Consensus 592 ~~~~-~-e~~~~~~e~~l~~~K~~w~~ 616 (626)
.-.. - -.+....-.+++.+|.=.++
T Consensus 207 ~~~~~~~~p~~~~~R~l~~~~k~~~t~ 233 (249)
T 3g89_A 207 GEVLALQLPLSGEARHLVVLEKTAPTP 233 (249)
T ss_dssp EEEEEEECTTTCCEEEEEEEEECSCCC
T ss_pred EEEEEeeCCCCCCcEEEEEEEeCCCCC
Confidence 5322 1 12222334566677755444
No 231
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.91 E-value=2.2e-09 Score=103.33 Aligned_cols=112 Identities=13% Similarity=0.106 Sum_probs=82.2
Q ss_pred eEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhc----c-cceeccccccCCCCC-CccceeeeccccccC
Q 006905 472 NILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERG----L-VGTYTNWCEAMSTYP-RTYDLIHADSVFSLY 545 (626)
Q Consensus 472 ~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rg----l-i~~~~~~~e~~~~yp-~t~Dlih~~~~f~~~ 545 (626)
+|||+|||.|.++..|++.+. +|+.+|.++.+++.+.++. + +.++..-.+.+ .+| .+||+|.+. |.+.
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~v~~~--~~~~ 105 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGY---EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADF-DIVADAWEGIVSI--FCHL 105 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTC---EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTB-SCCTTTCSEEEEE--CCCC
T ss_pred CEEEECCCCCHhHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhc-CCCcCCccEEEEE--hhcC
Confidence 899999999999999999876 8999999999999888773 2 23333111222 244 899999984 4444
Q ss_pred CCCCCHHHHHHHhhhhccCCcEEEEEcCh-----------------HHHHHHHHHHHhCCCeeE
Q 006905 546 KDRCETEDILLEMDRILRPEGGVIFRDDV-----------------DELVKVKRIIDALKWQSQ 592 (626)
Q Consensus 546 ~~~c~~~~~l~E~dRiLRPgG~~i~~d~~-----------------~~~~~~~~~~~~l~w~~~ 592 (626)
...+...+|.++.|+|||||.+++.+.. -....+++++. .|++.
T Consensus 106 -~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~ 166 (202)
T 2kw5_A 106 -PSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWL 166 (202)
T ss_dssp -CHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEE
T ss_pred -CHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEE
Confidence 2235678999999999999999998421 12566777766 67665
No 232
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.91 E-value=1.7e-09 Score=105.38 Aligned_cols=98 Identities=13% Similarity=0.148 Sum_probs=79.1
Q ss_pred CceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcccceec-cccccCCCCC-CccceeeeccccccCC
Q 006905 469 RYRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGLVGTYT-NWCEAMSTYP-RTYDLIHADSVFSLYK 546 (626)
Q Consensus 469 ~~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgli~~~~-~~~e~~~~yp-~t~Dlih~~~~f~~~~ 546 (626)
.-.+|||+|||.|.++..|++.+. +|+.+|.++.+++.+.++.. ...+ |..+....++ .+||+|.+..++.+..
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~---~~~~~D~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~ 107 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENGT---RVSGIEAFPEAAEQAKEKLD-HVVLGDIETMDMPYEEEQFDCVIFGDVLEHLF 107 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTTC---EEEEEESSHHHHHHHHTTSS-EEEESCTTTCCCCSCTTCEEEEEEESCGGGSS
T ss_pred CCCcEEEeCCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHhCC-cEEEcchhhcCCCCCCCccCEEEECChhhhcC
Confidence 356899999999999999999874 89999999899998888763 3333 3222223455 8999999999998886
Q ss_pred CCCCHHHHHHHhhhhccCCcEEEEEcC
Q 006905 547 DRCETEDILLEMDRILRPEGGVIFRDD 573 (626)
Q Consensus 547 ~~c~~~~~l~E~dRiLRPgG~~i~~d~ 573 (626)
+.+.+|.++.|+|||||++++...
T Consensus 108 ---~~~~~l~~~~~~L~~gG~l~~~~~ 131 (230)
T 3cc8_A 108 ---DPWAVIEKVKPYIKQNGVILASIP 131 (230)
T ss_dssp ---CHHHHHHHTGGGEEEEEEEEEEEE
T ss_pred ---CHHHHHHHHHHHcCCCCEEEEEeC
Confidence 458999999999999999999753
No 233
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.91 E-value=2.7e-09 Score=103.11 Aligned_cols=127 Identities=9% Similarity=0.073 Sum_probs=89.2
Q ss_pred eeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHHHh----cc--cceeccccccCCCCC--Cccceeeecc
Q 006905 471 RNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIYER----GL--VGTYTNWCEAMSTYP--RTYDLIHADS 540 (626)
Q Consensus 471 r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~r----gl--i~~~~~~~e~~~~yp--~t~Dlih~~~ 540 (626)
.+|||+|||.|.++..|+.. +. +|+.+|.++.+++.+.++ |+ +.+++ ..+..++ .+||+|.+..
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~---~d~~~~~~~~~~D~i~~~~ 140 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVRPEA---HFTLLDSLGKRVRFLRQVQHELKLENIEPVQ---SRVEEFPSEPPFDGVISRA 140 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHTTCSSEEEEE---CCTTTSCCCSCEEEEECSC
T ss_pred CeEEEECCCCCHHHHHHHHHCCCC---EEEEEeCCHHHHHHHHHHHHHcCCCCeEEEe---cchhhCCccCCcCEEEEec
Confidence 47999999999999999864 33 789999998999888764 44 33333 3333333 7999999854
Q ss_pred ccccCCCCCCHHHHHHHhhhhccCCcEEEEEcChHHHHHHHHHHHhCCCeeEEee--cCCCCCCcceEEEEEec
Q 006905 541 VFSLYKDRCETEDILLEMDRILRPEGGVIFRDDVDELVKVKRIIDALKWQSQIVD--HEDGPLEREKLLFAVKL 612 (626)
Q Consensus 541 ~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~~~~~~~~~~~~~l~w~~~~~~--~e~~~~~~e~~l~~~K~ 612 (626)
+ .++..++.++.|+|+|||++++.........++++.+ .|+..... .-....+...+++++|.
T Consensus 141 ~-------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~k~ 205 (207)
T 1jsx_A 141 F-------ASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPE--EYQVESVVKLQVPALDGERHLVVIKAN 205 (207)
T ss_dssp S-------SSHHHHHHHHTTSEEEEEEEEEEESSCCHHHHHTSCT--TEEEEEEEEEECC--CCEEEEEEEEEC
T ss_pred c-------CCHHHHHHHHHHhcCCCcEEEEEeCCCchHHHHHHhc--CCceeeeeeeccCCCCCceEEEEEEec
Confidence 2 3578999999999999999999876655566666665 67654311 11222245677777764
No 234
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.91 E-value=5.5e-09 Score=103.73 Aligned_cols=109 Identities=15% Similarity=0.138 Sum_probs=76.1
Q ss_pred HHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCC-CeEEEEcccccCCC
Q 006905 196 AYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGV-PALIGVLAAERLPY 271 (626)
Q Consensus 196 ~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~-~~~~~v~d~~~Lpf 271 (626)
.....+.+.+...+ +.+|||||||+|.++..|++. .++++|+++..+..+... ....+. .+.+...|. ..++
T Consensus 78 ~~~~~~~~~l~~~~--~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~v~~~~~d~-~~~~ 153 (235)
T 1jg1_A 78 HMVAIMLEIANLKP--GMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRN-LERAGVKNVHVILGDG-SKGF 153 (235)
T ss_dssp HHHHHHHHHHTCCT--TCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHH-HHHTTCCSEEEEESCG-GGCC
T ss_pred HHHHHHHHhcCCCC--CCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHH-HHHcCCCCcEEEECCc-ccCC
Confidence 34455566664443 458999999999999998874 689999877554433332 223444 356666665 4455
Q ss_pred CCC-CeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 006905 272 PSR-AFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGPP 315 (626)
Q Consensus 272 ~d~-sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~pp 315 (626)
++. .||+|++..+++++. .++.++|||||.+++..++
T Consensus 154 ~~~~~fD~Ii~~~~~~~~~-------~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 154 PPKAPYDVIIVTAGAPKIP-------EPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp GGGCCEEEEEECSBBSSCC-------HHHHHTEEEEEEEEEEECS
T ss_pred CCCCCccEEEECCcHHHHH-------HHHHHhcCCCcEEEEEEec
Confidence 544 499999998885544 3688999999999998764
No 235
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.91 E-value=5.5e-09 Score=103.03 Aligned_cols=111 Identities=14% Similarity=0.144 Sum_probs=76.1
Q ss_pred HHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC----------CcEEEeCCccchHHHHHHHHHHc-----CCCeEE
Q 006905 197 YIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR----------NIITMSFAPRDTHEAQVQFALER-----GVPALI 261 (626)
Q Consensus 197 yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~----------~V~avdis~~dls~a~i~~A~er-----g~~~~~ 261 (626)
....+.+.+.....++.+|||||||+|.++..|++. .++++|+++..+..+..+..... ...+.+
T Consensus 70 ~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~ 149 (227)
T 1r18_A 70 MHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLI 149 (227)
T ss_dssp HHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEE
T ss_pred HHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEE
Confidence 334455555312233559999999999999888763 58899988765554443333211 124667
Q ss_pred EEcccccCCCCC-CCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 006905 262 GVLAAERLPYPS-RAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGPP 315 (626)
Q Consensus 262 ~v~d~~~Lpf~d-~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~pp 315 (626)
...|... ++++ ++||+|++..++++.. .++.++|||||.+++...+
T Consensus 150 ~~~d~~~-~~~~~~~fD~I~~~~~~~~~~-------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 150 VEGDGRK-GYPPNAPYNAIHVGAAAPDTP-------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp EESCGGG-CCGGGCSEEEEEECSCBSSCC-------HHHHHTEEEEEEEEEEESC
T ss_pred EECCccc-CCCcCCCccEEEECCchHHHH-------HHHHHHhcCCCEEEEEEec
Confidence 7777655 4444 7899999998885543 6789999999999998653
No 236
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.91 E-value=5.8e-09 Score=104.10 Aligned_cols=107 Identities=13% Similarity=0.094 Sum_probs=77.7
Q ss_pred HHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcC-CCeEEEEcccccCCCCC
Q 006905 200 DIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERG-VPALIGVLAAERLPYPS 273 (626)
Q Consensus 200 ~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg-~~~~~~v~d~~~Lpf~d 273 (626)
.+.+.+...+ +.+|||+|||+|.++..+++. .++++|+++..+..+........+ ..+.+...|....++++
T Consensus 87 ~~~~~~~~~~--~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~ 164 (258)
T 2pwy_A 87 AMVTLLDLAP--GMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEE 164 (258)
T ss_dssp HHHHHTTCCT--TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCT
T ss_pred HHHHHcCCCC--CCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCC
Confidence 4444444333 459999999999999888875 578888877555444333332204 34677778888888888
Q ss_pred CCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 274 RAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 274 ~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
++||+|++.. . ++..++.++.++|||||.+++..+
T Consensus 165 ~~~D~v~~~~-----~-~~~~~l~~~~~~L~~gG~l~~~~~ 199 (258)
T 2pwy_A 165 AAYDGVALDL-----M-EPWKVLEKAALALKPDRFLVAYLP 199 (258)
T ss_dssp TCEEEEEEES-----S-CGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CCcCEEEECC-----c-CHHHHHHHHHHhCCCCCEEEEEeC
Confidence 8999999832 2 346789999999999999999865
No 237
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.89 E-value=4.3e-09 Score=103.43 Aligned_cols=107 Identities=13% Similarity=-0.041 Sum_probs=75.3
Q ss_pred HHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC---------CcEEEeCCccchHHHHHHHHHHcC------CCeEEEEc
Q 006905 200 DIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR---------NIITMSFAPRDTHEAQVQFALERG------VPALIGVL 264 (626)
Q Consensus 200 ~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~---------~V~avdis~~dls~a~i~~A~erg------~~~~~~v~ 264 (626)
.+.+.+.....++.+|||||||+|.++..|++. .++++|+++..+..+..+.. ..+ ..+.+...
T Consensus 69 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~~~~~v~~~~~ 147 (227)
T 2pbf_A 69 LSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIK-RDKPELLKIDNFKIIHK 147 (227)
T ss_dssp HHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHH-HHCGGGGSSTTEEEEEC
T ss_pred HHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHH-HcCccccccCCEEEEEC
Confidence 444444212223569999999999999888874 58888887755544433333 333 34677777
Q ss_pred ccccCC----CCCCCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 265 AAERLP----YPSRAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 265 d~~~Lp----f~d~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
|..... ...++||+|++...+++. +.++.++|||||.+++..+
T Consensus 148 d~~~~~~~~~~~~~~fD~I~~~~~~~~~-------~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 148 NIYQVNEEEKKELGLFDAIHVGASASEL-------PEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp CGGGCCHHHHHHHCCEEEEEECSBBSSC-------CHHHHHHEEEEEEEEEEEE
T ss_pred ChHhcccccCccCCCcCEEEECCchHHH-------HHHHHHhcCCCcEEEEEEc
Confidence 876654 556789999998887543 4778999999999999865
No 238
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.89 E-value=2.1e-10 Score=113.99 Aligned_cols=98 Identities=15% Similarity=0.122 Sum_probs=75.1
Q ss_pred CCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccccCCCCCCCeeEEEecccccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAERLPYPSRAFDMAHCSRCLIP 287 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h 287 (626)
+.+|||+|||+|.++..|++. .|+++|+++.++..+.. .+...++ .+.+..+|...++ ++++||+|+++..+++
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~~ 156 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARN-NAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPWGG 156 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCCSS
T ss_pred CCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHH-HHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCcCC
Confidence 458999999999999999987 57888887755554333 3334454 5778888877766 5679999999998855
Q ss_pred ccccHHHHHHHHHhcccCCeEEEEE
Q 006905 288 WNQFGGIYLIEVDRVLRPGGYWILS 312 (626)
Q Consensus 288 ~~~~~~~~L~Ei~RvLKPGG~lvis 312 (626)
.. .....+.++.++|+|||.+++.
T Consensus 157 ~~-~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 157 PD-YATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp GG-GGGSSSBCTTTSCSSCHHHHHH
T ss_pred cc-hhhhHHHHHHhhcCCcceeHHH
Confidence 44 3455778999999999997775
No 239
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.88 E-value=6.7e-09 Score=105.35 Aligned_cols=108 Identities=17% Similarity=0.086 Sum_probs=78.4
Q ss_pred HHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcC---CCeEEEEcccccCC
Q 006905 199 DDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERG---VPALIGVLAAERLP 270 (626)
Q Consensus 199 ~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg---~~~~~~v~d~~~Lp 270 (626)
..+...+...+ +.+|||+|||+|.++..|++. .++++|+++..+..+..+.....+ ..+.+...|...++
T Consensus 89 ~~i~~~~~~~~--~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~ 166 (280)
T 1i9g_A 89 AQIVHEGDIFP--GARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSE 166 (280)
T ss_dssp HHHHHHTTCCT--TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCC
T ss_pred HHHHHHcCCCC--CCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcC
Confidence 34444544333 458999999999999988874 588888877555444433332203 35677778888888
Q ss_pred CCCCCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 271 YPSRAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 271 f~d~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+++++||+|++.. . ++..++.++.++|+|||++++..+
T Consensus 167 ~~~~~~D~v~~~~-----~-~~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 167 LPDGSVDRAVLDM-----L-APWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp CCTTCEEEEEEES-----S-CGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CCCCceeEEEECC-----c-CHHHHHHHHHHhCCCCCEEEEEeC
Confidence 8888999999843 1 345789999999999999999865
No 240
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.88 E-value=1.1e-09 Score=108.67 Aligned_cols=102 Identities=16% Similarity=0.121 Sum_probs=74.1
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc-----cceec-cccccCCCCC-Cccceeee-ccc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL-----VGTYT-NWCEAMSTYP-RTYDLIHA-DSV 541 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl-----i~~~~-~~~e~~~~yp-~t~Dlih~-~~~ 541 (626)
-.+|||+|||+|.++..|++.+. -+|+.+|.++.|++.+.++.- +.+++ |+.+....+| ++||+|.+ ...
T Consensus 61 ~~~vLDiGcGtG~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~ 138 (236)
T 1zx0_A 61 GGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYP 138 (236)
T ss_dssp CEEEEEECCTTSHHHHHHHTSCE--EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCC
T ss_pred CCeEEEEeccCCHHHHHHHhcCC--CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCcc
Confidence 46799999999999999988754 378999999999999988752 23333 3333223466 89999998 333
Q ss_pred cc-cCCCCCCHHHHHHHhhhhccCCcEEEEEcC
Q 006905 542 FS-LYKDRCETEDILLEMDRILRPEGGVIFRDD 573 (626)
Q Consensus 542 f~-~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~ 573 (626)
+. ...+.-+.+.+|.|+.|+|||||.+++.+.
T Consensus 139 ~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 139 LSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp CBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred cchhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 21 111222345789999999999999998753
No 241
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.88 E-value=3.9e-09 Score=102.30 Aligned_cols=95 Identities=25% Similarity=0.407 Sum_probs=74.2
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhc-ccceeccccccCCCCC-CccceeeeccccccCCC
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERG-LVGTYTNWCEAMSTYP-RTYDLIHADSVFSLYKD 547 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rg-li~~~~~~~e~~~~yp-~t~Dlih~~~~f~~~~~ 547 (626)
-.+|||+|||.|.++..| +. -+|+.+|.++.++..+.++. -+..++.-.+.+ ++| ++||+|.+..++.+..
T Consensus 37 ~~~vLdiG~G~G~~~~~l---~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~-~~~~~~fD~v~~~~~l~~~~- 109 (211)
T 2gs9_A 37 GESLLEVGAGTGYWLRRL---PY--PQKVGVEPSEAMLAVGRRRAPEATWVRAWGEAL-PFPGESFDVVLLFTTLEFVE- 109 (211)
T ss_dssp CSEEEEETCTTCHHHHHC---CC--SEEEEECCCHHHHHHHHHHCTTSEEECCCTTSC-CSCSSCEEEEEEESCTTTCS-
T ss_pred CCeEEEECCCCCHhHHhC---CC--CeEEEEeCCHHHHHHHHHhCCCcEEEEcccccC-CCCCCcEEEEEEcChhhhcC-
Confidence 458999999999999998 22 16788999999999999884 123333212222 244 7999999999998876
Q ss_pred CCCHHHHHHHhhhhccCCcEEEEEcC
Q 006905 548 RCETEDILLEMDRILRPEGGVIFRDD 573 (626)
Q Consensus 548 ~c~~~~~l~E~dRiLRPgG~~i~~d~ 573 (626)
+...+|.|+.|+|||||.+++.+.
T Consensus 110 --~~~~~l~~~~~~L~pgG~l~i~~~ 133 (211)
T 2gs9_A 110 --DVERVLLEARRVLRPGGALVVGVL 133 (211)
T ss_dssp --CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --CHHHHHHHHHHHcCCCCEEEEEec
Confidence 568999999999999999999864
No 242
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.87 E-value=3.7e-09 Score=112.53 Aligned_cols=95 Identities=19% Similarity=0.143 Sum_probs=71.5
Q ss_pred CCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCCCeeEEEeccccccc
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSRAFDMAHCSRCLIPW 288 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h~ 288 (626)
...+|||||||+|.++..++++ ++.++.+ |+ +.+++.+++. ..+.+..+|... ++++ ||+|++..++|||
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~---D~-~~~~~~a~~~-~~v~~~~~d~~~-~~~~--~D~v~~~~~lh~~ 280 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYPLIKGINF---DL-PQVIENAPPL-SGIEHVGGDMFA-SVPQ--GDAMILKAVCHNW 280 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEE---EC-HHHHTTCCCC-TTEEEEECCTTT-CCCC--EEEEEEESSGGGS
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCCCCeEEEe---Ch-HHHHHhhhhc-CCCEEEeCCccc-CCCC--CCEEEEecccccC
Confidence 3569999999999999999886 4444433 33 3444444432 346777778665 6664 9999999999888
Q ss_pred cccH-HHHHHHHHhcccCCeEEEEEe
Q 006905 289 NQFG-GIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 289 ~~~~-~~~L~Ei~RvLKPGG~lvis~ 313 (626)
.+.. ..+|+++.|+|||||+|++..
T Consensus 281 ~d~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 281 SDEKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 7642 389999999999999999974
No 243
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.87 E-value=3.3e-09 Score=105.15 Aligned_cols=96 Identities=15% Similarity=0.141 Sum_probs=67.8
Q ss_pred CCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCCCeEEEEccccc----CCCCCCCeeEEEec
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAER----LPYPSRAFDMAHCS 282 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~----Lpf~d~sFDlV~~~ 282 (626)
++.+|||+|||+|.++..|++. .|+++|+++.++..+. +.+..+ ..+.+...|... +++. ++||+|++.
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~-~~~~~~-~~v~~~~~d~~~~~~~~~~~-~~~D~v~~~ 150 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELL-DACAER-ENIIPILGDANKPQEYANIV-EKVDVIYED 150 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHH-HHTTTC-TTEEEEECCTTCGGGGTTTS-CCEEEEEEC
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHH-HHhhcC-CCeEEEECCCCCcccccccC-ccEEEEEEe
Confidence 3568999999999999988875 4788888775443222 122222 456677778776 7776 789999832
Q ss_pred cccccccccHHHHHHHHHhcccCCeEEEEE
Q 006905 283 RCLIPWNQFGGIYLIEVDRVLRPGGYWILS 312 (626)
Q Consensus 283 ~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis 312 (626)
. ........++.++.++|||||++++.
T Consensus 151 ~---~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 151 V---AQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp C---CSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred c---CChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 1 11111267799999999999999997
No 244
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.87 E-value=2.8e-09 Score=110.66 Aligned_cols=130 Identities=11% Similarity=0.110 Sum_probs=88.8
Q ss_pred ceeEEeccCchhhHhhhhh-C-CCeEEEEeccCccCcccHHHHHHh----cccceeccccccCCCCC-Cccceeeecccc
Q 006905 470 YRNILDMNAHLGGFAAALI-D-FPVWVMNVVPAEAKINTLGVIYER----GLVGTYTNWCEAMSTYP-RTYDLIHADSVF 542 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~-~-~~v~~mnv~~~~~~~~~l~~~~~r----gli~~~~~~~e~~~~yp-~t~Dlih~~~~f 542 (626)
-.+|||+|||.|++++.++ + .+. .|+.+|.++.+++.|.++ |+ .-+.-.+.....+| ++||+|.+..+
T Consensus 123 g~rVLDIGcG~G~~ta~~lA~~~ga---~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~d~~FDvV~~~a~- 197 (298)
T 3fpf_A 123 GERAVFIGGGPLPLTGILLSHVYGM---RVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVIDGLEFDVLMVAAL- 197 (298)
T ss_dssp TCEEEEECCCSSCHHHHHHHHTTCC---EEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGGGCCCSEEEECTT-
T ss_pred cCEEEEECCCccHHHHHHHHHccCC---EEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCCCCCcCEEEECCC-
Confidence 5689999999999886654 3 244 799999999999998877 65 22222234455566 99999987543
Q ss_pred ccCCCCCCHHHHHHHhhhhccCCcEEEEEcChHHH----HHHHHHHHhCCCeeEEeecCCCCCCcceEEEEEe
Q 006905 543 SLYKDRCETEDILLEMDRILRPEGGVIFRDDVDEL----VKVKRIIDALKWQSQIVDHEDGPLEREKLLFAVK 611 (626)
Q Consensus 543 ~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~~~~----~~~~~~~~~l~w~~~~~~~e~~~~~~e~~l~~~K 611 (626)
.-+.+.++.|+.|+|||||.+++++....- ..+.+ ...-.|+.....+-.+. ....|.+++|
T Consensus 198 -----~~d~~~~l~el~r~LkPGG~Lvv~~~~~~r~~l~~~v~~-~~~~gf~~~~~~~p~~~-v~N~vv~a~k 263 (298)
T 3fpf_A 198 -----AEPKRRVFRNIHRYVDTETRIIYRTYTGMRAILYAPVSD-DDITGFRRAGVVLPSGK-VNNTSVLVFK 263 (298)
T ss_dssp -----CSCHHHHHHHHHHHCCTTCEEEEEECCGGGGGSSCCCCT-GGGTTEEEEEEECCCTT-CCCEEEEEEE
T ss_pred -----ccCHHHHHHHHHHHcCCCcEEEEEcCcchhhhccccCCh-hhhhhhhheeEECCCCC-cCcEEEEEEc
Confidence 136689999999999999999998743210 00101 12226766655554433 3467888888
No 245
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.87 E-value=1.3e-09 Score=112.00 Aligned_cols=94 Identities=15% Similarity=0.281 Sum_probs=73.6
Q ss_pred eEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc---------cceeccccccCCCC--CCccceeeec-
Q 006905 472 NILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL---------VGTYTNWCEAMSTY--PRTYDLIHAD- 539 (626)
Q Consensus 472 ~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl---------i~~~~~~~e~~~~y--p~t~Dlih~~- 539 (626)
+|||+|||.|.++..|++.+. +|+.+|.++.+++.+.++.- +.++. ..+..+ +.+||+|.+.
T Consensus 85 ~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~---~d~~~~~~~~~fD~v~~~~ 158 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDLGW---EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQ---GDMSAFALDKRFGTVVISS 158 (299)
T ss_dssp CEEEETCTTTTTHHHHHTTTC---CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEE---CBTTBCCCSCCEEEEEECH
T ss_pred cEEEEeccCCHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHhhcccccccceEEEe---CchhcCCcCCCcCEEEECC
Confidence 899999999999999999975 79999999999999888732 23333 333333 5999999865
Q ss_pred cccccCCCCCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 540 SVFSLYKDRCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 540 ~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
.++.+. +..++..+|.++.|+|||||.+++..
T Consensus 159 ~~~~~~-~~~~~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 159 GSINEL-DEADRRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp HHHTTS-CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccccC-CHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 445443 33356789999999999999999974
No 246
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.87 E-value=4.7e-09 Score=111.88 Aligned_cols=94 Identities=15% Similarity=0.075 Sum_probs=72.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhC--C--cEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCCCeeEEEeccccc
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR--N--IITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSRAFDMAHCSRCLI 286 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~--~--V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~ 286 (626)
...+|||||||+|.++..++++ + ++++|+ +.+++.++++ ..+.+..+|... |++++ |+|++..++|
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~------~~~~~~a~~~-~~v~~~~~d~~~-~~p~~--D~v~~~~vlh 272 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYPSINAINFDL------PHVIQDAPAF-SGVEHLGGDMFD-GVPKG--DAIFIKWICH 272 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC------HHHHTTCCCC-TTEEEEECCTTT-CCCCC--SEEEEESCGG
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh------HHHHHhhhhc-CCCEEEecCCCC-CCCCC--CEEEEechhh
Confidence 3569999999999999999885 3 455555 2344444332 357788888665 67654 9999999998
Q ss_pred cccccH-HHHHHHHHhcccCCeEEEEEeC
Q 006905 287 PWNQFG-GIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 287 h~~~~~-~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+|.+.. ..+|+++.++|||||+++|...
T Consensus 273 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 301 (368)
T 3reo_A 273 DWSDEHCLKLLKNCYAALPDHGKVIVAEY 301 (368)
T ss_dssp GBCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 897654 5899999999999999999753
No 247
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.87 E-value=1.3e-09 Score=105.31 Aligned_cols=136 Identities=15% Similarity=0.127 Sum_probs=92.5
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc----cceeccccccCCCCC-Cccceeeecccccc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL----VGTYTNWCEAMSTYP-RTYDLIHADSVFSL 544 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl----i~~~~~~~e~~~~yp-~t~Dlih~~~~f~~ 544 (626)
-.+|||+|||.|.++..|++.+.- +|+.+|.++.+++.+.++.- +.+.+.-.+.+ .++ .+||+|.+..+|.+
T Consensus 43 ~~~vLdiGcG~G~~~~~l~~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~-~~~~~~fD~v~~~~~~~~ 119 (215)
T 2pxx_A 43 EDRILVLGCGNSALSYELFLGGFP--NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKL-DFPSASFDVVLEKGTLDA 119 (215)
T ss_dssp TCCEEEETCTTCSHHHHHHHTTCC--CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSC-CSCSSCEEEEEEESHHHH
T ss_pred CCeEEEECCCCcHHHHHHHHcCCC--cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcC-CCCCCcccEEEECcchhh
Confidence 357999999999999999988642 78999999999999888742 23333111222 344 89999999888865
Q ss_pred CCC------------CCCHHHHHHHhhhhccCCcEEEEEcChHHHHHHHHHH--HhCCCeeEEeecCCCCCCcceEEEEE
Q 006905 545 YKD------------RCETEDILLEMDRILRPEGGVIFRDDVDELVKVKRII--DALKWQSQIVDHEDGPLEREKLLFAV 610 (626)
Q Consensus 545 ~~~------------~c~~~~~l~E~dRiLRPgG~~i~~d~~~~~~~~~~~~--~~l~w~~~~~~~e~~~~~~e~~l~~~ 610 (626)
... ..+...+|.|+.|+|||||.+++.+..... ..+.++ ....|.......+++. .-.+.+++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 196 (215)
T 2pxx_A 120 LLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAPH-FRTRHYAQAYYGWSLRHATYGSGF--HFHLYLMH 196 (215)
T ss_dssp HTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCHH-HHHHHHCCGGGCEEEEEEEESGGG--CEEEEEEE
T ss_pred hccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCcH-HHHHHHhccccCcEEEEEEecCcc--eEEEEEEE
Confidence 431 124578999999999999999998765321 122333 3446876644433322 33466666
Q ss_pred e
Q 006905 611 K 611 (626)
Q Consensus 611 K 611 (626)
|
T Consensus 197 ~ 197 (215)
T 2pxx_A 197 K 197 (215)
T ss_dssp E
T ss_pred e
Confidence 5
No 248
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.87 E-value=8.8e-09 Score=103.99 Aligned_cols=121 Identities=14% Similarity=0.198 Sum_probs=91.4
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc---cceec-cccccCCCCC-Cccceeeecc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL---VGTYT-NWCEAMSTYP-RTYDLIHADS 540 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~-~~~e~~~~yp-~t~Dlih~~~ 540 (626)
-.+|||+|||.|.++..|++++-. +|+.+|.++.+++.+.++ |+ +.+++ |..+....++ .+||+|.++-
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~~--~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~np 127 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTKA--KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNP 127 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCCC--EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECC
T ss_pred CCEEEEcCCchhHHHHHHHHhcCC--cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECC
Confidence 568999999999999999988543 899999999999887765 43 34444 3333333354 8999999976
Q ss_pred ccccC-----------------CCCCCHHHHHHHhhhhccCCcEEEEEcChHHHHHHHHHHHhCCCeeE
Q 006905 541 VFSLY-----------------KDRCETEDILLEMDRILRPEGGVIFRDDVDELVKVKRIIDALKWQSQ 592 (626)
Q Consensus 541 ~f~~~-----------------~~~c~~~~~l~E~dRiLRPgG~~i~~d~~~~~~~~~~~~~~l~w~~~ 592 (626)
.|... ...++++.++.++.|+|||||.+++.-..+.+..+...+....|...
T Consensus 128 Py~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~~~~~~ 196 (259)
T 3lpm_A 128 PYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPK 196 (259)
T ss_dssp CC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTTHHHHHHHHHHTTEEEE
T ss_pred CCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHHHHHHHHHHHHCCCceE
Confidence 55322 11245678999999999999999998777778888888888888865
No 249
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.86 E-value=1.7e-09 Score=114.12 Aligned_cols=96 Identities=16% Similarity=0.068 Sum_probs=69.3
Q ss_pred CCCEEEEeCCCCchHHHHHhhC--C--cEEEeCCccchHHHHHH-HHHHcC--CCeEEEEcccccCCCCCCCeeEEEecc
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR--N--IITMSFAPRDTHEAQVQ-FALERG--VPALIGVLAAERLPYPSRAFDMAHCSR 283 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~--~--V~avdis~~dls~a~i~-~A~erg--~~~~~~v~d~~~Lpf~d~sFDlV~~~~ 283 (626)
...+|||||||+|.++..++++ + ++++|+ .....+ .+...+ ..+.+..+|.. .+++ +||+|++..
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-----~~~~~~~~~~~~~~~~~v~~~~~d~~-~~~p--~~D~v~~~~ 255 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-----AEVVARHRLDAPDVAGRWKVVEGDFL-REVP--HADVHVLKR 255 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-----HHHHTTCCCCCGGGTTSEEEEECCTT-TCCC--CCSEEEEES
T ss_pred CCceEEEECCccCHHHHHHHHHCCCCEEEEecC-----HHHhhcccccccCCCCCeEEEecCCC-CCCC--CCcEEEEeh
Confidence 3569999999999999999885 3 445554 222110 000112 23677777764 4455 899999999
Q ss_pred ccccccccH-HHHHHHHHhcccCCeEEEEEeC
Q 006905 284 CLIPWNQFG-GIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 284 ~l~h~~~~~-~~~L~Ei~RvLKPGG~lvis~p 314 (626)
++|||.+.. ..+|+++.|+|||||+|++...
T Consensus 256 vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 256 ILHNWGDEDSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp CGGGSCHHHHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred hccCCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 998887644 6899999999999999999764
No 250
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.86 E-value=7.4e-09 Score=112.91 Aligned_cols=115 Identities=11% Similarity=0.000 Sum_probs=78.7
Q ss_pred HHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHH--HHHH----HHHcC---CCeEE
Q 006905 195 DAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEA--QVQF----ALERG---VPALI 261 (626)
Q Consensus 195 ~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a--~i~~----A~erg---~~~~~ 261 (626)
...+..+.+.+.... +.+|||||||+|.++..|++. .|+++|+++..+..+ |++. +...| ..+.+
T Consensus 228 p~~v~~ml~~l~l~~--g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~ 305 (433)
T 1u2z_A 228 PNFLSDVYQQCQLKK--GDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEF 305 (433)
T ss_dssp HHHHHHHHHHTTCCT--TCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEE
T ss_pred HHHHHHHHHhcCCCC--CCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEE
Confidence 444555555554443 559999999999999999884 489999988655544 3222 23345 24556
Q ss_pred EEcccccC--CC--CCCCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEe
Q 006905 262 GVLAAERL--PY--PSRAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 262 ~v~d~~~L--pf--~d~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
..++.... ++ ..++||+|+++.++ +..+...+|.++.|+|||||.+++..
T Consensus 306 i~gD~~~~~~~~~~~~~~FDvIvvn~~l--~~~d~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 306 SLKKSFVDNNRVAELIPQCDVILVNNFL--FDEDLNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp EESSCSTTCHHHHHHGGGCSEEEECCTT--CCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred EEcCccccccccccccCCCCEEEEeCcc--ccccHHHHHHHHHHhCCCCeEEEEee
Confidence 55543322 22 24689999998766 33445788999999999999999974
No 251
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.86 E-value=6.6e-09 Score=110.64 Aligned_cols=94 Identities=17% Similarity=0.099 Sum_probs=72.6
Q ss_pred CCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCCCeeEEEeccccc
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSRAFDMAHCSRCLI 286 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~ 286 (626)
...+|||||||+|.++..++++ .++++|+ ..+++.+++. ..+.+..+|... |++.+ |+|++..++|
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~------~~~~~~a~~~-~~v~~~~~D~~~-~~p~~--D~v~~~~vlh 270 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL------PHVISEAPQF-PGVTHVGGDMFK-EVPSG--DTILMKWILH 270 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC------HHHHTTCCCC-TTEEEEECCTTT-CCCCC--SEEEEESCGG
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC------HHHHHhhhhc-CCeEEEeCCcCC-CCCCC--CEEEehHHhc
Confidence 3569999999999999999875 3555555 2344444332 357788888766 77754 9999999998
Q ss_pred cccccH-HHHHHHHHhcccCCeEEEEEeC
Q 006905 287 PWNQFG-GIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 287 h~~~~~-~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+|.++. ..+|+++.++|||||+|+|...
T Consensus 271 ~~~d~~~~~~L~~~~~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 271 DWSDQHCATLLKNCYDALPAHGKVVLVQC 299 (364)
T ss_dssp GSCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 897643 6899999999999999999753
No 252
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.85 E-value=3.3e-09 Score=106.34 Aligned_cols=104 Identities=15% Similarity=0.012 Sum_probs=70.3
Q ss_pred CCCEEEEeCCCCchHHHHHhhC------CcEEEeCCccchHHHHHHHHHHc--CC--C----------------------
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR------NIITMSFAPRDTHEAQVQFALER--GV--P---------------------- 258 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~------~V~avdis~~dls~a~i~~A~er--g~--~---------------------- 258 (626)
...+|||+|||+|.++..++.. .++++|+++..+..+..+..... ++ .
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 3568999999999999888764 58889988765554432221110 11 0
Q ss_pred ---eE-------------EEEcccccCCC-----CCCCeeEEEeccccccccc--------cHHHHHHHHHhcccCCeEE
Q 006905 259 ---AL-------------IGVLAAERLPY-----PSRAFDMAHCSRCLIPWNQ--------FGGIYLIEVDRVLRPGGYW 309 (626)
Q Consensus 259 ---~~-------------~~v~d~~~Lpf-----~d~sFDlV~~~~~l~h~~~--------~~~~~L~Ei~RvLKPGG~l 309 (626)
+. +...|...... ..++||+|+|+..+++... ....++.++.++|||||++
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 22 66667544221 3458999999876644332 2258999999999999999
Q ss_pred EEEeC
Q 006905 310 ILSGP 314 (626)
Q Consensus 310 vis~p 314 (626)
++...
T Consensus 211 ~~~~~ 215 (250)
T 1o9g_A 211 AVTDR 215 (250)
T ss_dssp EEEES
T ss_pred EEeCc
Confidence 99643
No 253
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.85 E-value=5.4e-09 Score=102.78 Aligned_cols=99 Identities=15% Similarity=0.138 Sum_probs=70.2
Q ss_pred CCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcCCC--eEEEEccccc-CCCC-----CCCeeE
Q 006905 212 IRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERGVP--ALIGVLAAER-LPYP-----SRAFDM 278 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg~~--~~~~v~d~~~-Lpf~-----d~sFDl 278 (626)
..+|||||||+|..+..|++. .|+++|+++.++..+..+. ...+.. +.+..+|+.. ++.. .++||+
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~ 137 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQML-NFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDM 137 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHH-HHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHH-HHcCCCCceEEEECCHHHHHHHHHHhcCCCceEE
Confidence 458999999999999999873 5888998876555443333 333442 6777777533 3322 268999
Q ss_pred EEeccccccccccHHHHHHHHHhcccCCeEEEEEe
Q 006905 279 AHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 279 V~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
|++....+++.. ...++.++ ++|||||+|++..
T Consensus 138 V~~d~~~~~~~~-~~~~~~~~-~~LkpgG~lv~~~ 170 (221)
T 3u81_A 138 VFLDHWKDRYLP-DTLLLEKC-GLLRKGTVLLADN 170 (221)
T ss_dssp EEECSCGGGHHH-HHHHHHHT-TCCCTTCEEEESC
T ss_pred EEEcCCcccchH-HHHHHHhc-cccCCCeEEEEeC
Confidence 999876645433 34667777 9999999999864
No 254
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.85 E-value=2.7e-09 Score=102.99 Aligned_cols=98 Identities=10% Similarity=0.097 Sum_probs=73.4
Q ss_pred ceeEEeccCchhhHh-hhhhCCCeEEEEeccCccCcccHHHHHHhc----c-cceeccccccCCCCC-Cccceeeecccc
Q 006905 470 YRNILDMNAHLGGFA-AALIDFPVWVMNVVPAEAKINTLGVIYERG----L-VGTYTNWCEAMSTYP-RTYDLIHADSVF 542 (626)
Q Consensus 470 ~r~vlD~g~g~G~fa-a~l~~~~v~~mnv~~~~~~~~~l~~~~~rg----l-i~~~~~~~e~~~~yp-~t~Dlih~~~~f 542 (626)
-.+|||+|||.|.++ ..++..+. +|+.+|.++.+++.+.++. . +...+.-.+.+ .+| ++||+|.+..++
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~v~~~~~l 99 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVEDGY---KTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKL-PFKDESMSFVYSYGTI 99 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHHTTC---EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSC-CSCTTCEEEEEECSCG
T ss_pred CCEEEEECCCCCHHHHHHHHhCCC---EEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhC-CCCCCceeEEEEcChH
Confidence 468999999999984 45556665 7999999999999887762 1 23333112222 244 899999999888
Q ss_pred ccCCCCCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 543 SLYKDRCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 543 ~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
.+.. .-+...+|.|+.|+|||||.+++.+
T Consensus 100 ~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 100 FHMR-KNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp GGSC-HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhCC-HHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 8773 2356889999999999999999975
No 255
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.85 E-value=4.5e-09 Score=102.56 Aligned_cols=98 Identities=20% Similarity=0.324 Sum_probs=75.6
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhc-----ccceeccccccCCC--CC-Cccceeeeccc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERG-----LVGTYTNWCEAMST--YP-RTYDLIHADSV 541 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rg-----li~~~~~~~e~~~~--yp-~t~Dlih~~~~ 541 (626)
-.+|||+|||.|.++..|++.+. +|+.+|.++.+++.+.++. -+..++ ..+.. +| .+||+|.+..+
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~---~d~~~~~~~~~~~D~v~~~~~ 112 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRESNVEFIV---GDARKLSFEDKTFDYVIFIDS 112 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEE---CCTTSCCSCTTCEEEEEEESC
T ss_pred CCeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCceEEE---CchhcCCCCCCcEEEEEEcCc
Confidence 45899999999999999998865 8999999999999888763 123333 22222 34 79999999888
Q ss_pred cccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh
Q 006905 542 FSLYKDRCETEDILLEMDRILRPEGGVIFRDDV 574 (626)
Q Consensus 542 f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~ 574 (626)
+.+... -+...+|.++.|+|||||.+++.+..
T Consensus 113 ~~~~~~-~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 113 IVHFEP-LELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp GGGCCH-HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hHhCCH-HHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 544332 24578999999999999999998654
No 256
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.85 E-value=8.7e-10 Score=109.58 Aligned_cols=100 Identities=11% Similarity=0.005 Sum_probs=76.6
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcccceeccccccCCCCC--------Cccceeeeccc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGLVGTYTNWCEAMSTYP--------RTYDLIHADSV 541 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgli~~~~~~~e~~~~yp--------~t~Dlih~~~~ 541 (626)
-.+|||+|||.|.++..|++.+. +|+.+|.++.+++.+.++.-...+.-.+..+...+ ..||+|.+..+
T Consensus 57 ~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~ 133 (245)
T 3ggd_A 57 ELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTG 133 (245)
T ss_dssp TSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESS
T ss_pred CCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcch
Confidence 45699999999999999998765 78999999999999988753111111123333322 24999999999
Q ss_pred cccCCCCCCHHHHHHHhhhhccCCcEEEEEcC
Q 006905 542 FSLYKDRCETEDILLEMDRILRPEGGVIFRDD 573 (626)
Q Consensus 542 f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~ 573 (626)
+.+... -+...+|.|+.|+|||||++++.+.
T Consensus 134 ~~~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 134 FHHIPV-EKRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp STTSCG-GGHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred hhcCCH-HHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 988763 3568999999999999999988753
No 257
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.85 E-value=8.9e-09 Score=103.15 Aligned_cols=102 Identities=21% Similarity=0.153 Sum_probs=72.5
Q ss_pred CCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHc-------CC-CeEEEEccccc-CC--CCCCCe
Q 006905 212 IRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALER-------GV-PALIGVLAAER-LP--YPSRAF 276 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~er-------g~-~~~~~v~d~~~-Lp--f~d~sF 276 (626)
+.+|||||||+|.++..|++. .++++|+++..+..+..+....+ +. ++.+..+|+.. ++ +++++|
T Consensus 50 ~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~~ 129 (246)
T 2vdv_E 50 KVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQL 129 (246)
T ss_dssp CEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTCE
T ss_pred CCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccccc
Confidence 458999999999999999875 48999998865554433332220 43 46777788665 66 778899
Q ss_pred eEEEeccccccccccH--------HHHHHHHHhcccCCeEEEEEeC
Q 006905 277 DMAHCSRCLIPWNQFG--------GIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 277 DlV~~~~~l~h~~~~~--------~~~L~Ei~RvLKPGG~lvis~p 314 (626)
|.|+....- +|.... ..++.++.++|+|||.|++...
T Consensus 130 d~v~~~~p~-p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 130 SKMFFCFPD-PHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITD 174 (246)
T ss_dssp EEEEEESCC-CC------CSSCCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred CEEEEECCC-cccccchhHHhhccHHHHHHHHHHcCCCCEEEEEec
Confidence 999864422 222110 4799999999999999999753
No 258
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.85 E-value=5.4e-09 Score=106.08 Aligned_cols=102 Identities=11% Similarity=0.040 Sum_probs=71.2
Q ss_pred CCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHH---cCCC--eEEEEcccccC-------CCCCCC
Q 006905 212 IRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALE---RGVP--ALIGVLAAERL-------PYPSRA 275 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~e---rg~~--~~~~v~d~~~L-------pf~d~s 275 (626)
..+|||+|||+|.++..|+++ .++++|+++..+..+..+. .. .+.. +.+...|...+ ++++++
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~-~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 115 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSL-ELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEH 115 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHT-TSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTC
T ss_pred CCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHH-HhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCC
Confidence 458999999999999998876 5778888664333322221 12 3332 67777787665 366789
Q ss_pred eeEEEeccccccc-----------------cccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 276 FDMAHCSRCLIPW-----------------NQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 276 FDlV~~~~~l~h~-----------------~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
||+|+++..+... ......++.++.++|||||.|++..+
T Consensus 116 fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 116 FHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp EEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 9999998544221 12246889999999999999999754
No 259
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.85 E-value=2.6e-09 Score=114.42 Aligned_cols=117 Identities=20% Similarity=0.275 Sum_probs=89.8
Q ss_pred ceeEEeccCchhhHhhhhhCC---CeEEEEeccCccCcccHHHHHHh---------c-c----cceeccccccCC-----
Q 006905 470 YRNILDMNAHLGGFAAALIDF---PVWVMNVVPAEAKINTLGVIYER---------G-L----VGTYTNWCEAMS----- 527 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~---~v~~mnv~~~~~~~~~l~~~~~r---------g-l----i~~~~~~~e~~~----- 527 (626)
-.+|||+|||.|.++..|++. +. +|+.+|.++.+++.+.++ | + +..++.-.+.+.
T Consensus 84 ~~~VLDlGcG~G~~~~~la~~~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 84 GATVLDLGCGTGRDVYLASKLVGEHG---KVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHTTTC---EEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCEEEEecCccCHHHHHHHHHhCCCC---EEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 457999999999999998764 33 789999999999999987 5 2 334442223321
Q ss_pred CCC-CccceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh-----------------------HHHHHHHHH
Q 006905 528 TYP-RTYDLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV-----------------------DELVKVKRI 583 (626)
Q Consensus 528 ~yp-~t~Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~-----------------------~~~~~~~~~ 583 (626)
.+| ++||+|++..++.+.. +...+|.|+.|+|||||++++.+.. -....+.++
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~---d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 237 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLST---NKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRL 237 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCS---CHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHH
T ss_pred CCCCCCEEEEEEccchhcCC---CHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHH
Confidence 455 8999999999999876 4689999999999999999998521 113678888
Q ss_pred HHhCCCeeE
Q 006905 584 IDALKWQSQ 592 (626)
Q Consensus 584 ~~~l~w~~~ 592 (626)
+..-.++..
T Consensus 238 l~~aGF~~v 246 (383)
T 4fsd_A 238 VAEAGFRDV 246 (383)
T ss_dssp HHHTTCCCE
T ss_pred HHHCCCceE
Confidence 888878644
No 260
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.84 E-value=1.1e-08 Score=102.21 Aligned_cols=105 Identities=12% Similarity=0.127 Sum_probs=74.9
Q ss_pred HHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcCCC--eEEEEcccccCCCC
Q 006905 200 DIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERGVP--ALIGVLAAERLPYP 272 (626)
Q Consensus 200 ~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg~~--~~~~v~d~~~Lpf~ 272 (626)
.+...+...+ +.+|||+|||+|.++..+++. .++++|+++..+..+..+ +...+.+ +.+...|.... ++
T Consensus 84 ~i~~~~~~~~--~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~-~~ 159 (255)
T 3mb5_A 84 LIVAYAGISP--GDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWEN-IKWAGFDDRVTIKLKDIYEG-IE 159 (255)
T ss_dssp HHHHHTTCCT--TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHH-HHHHTCTTTEEEECSCGGGC-CC
T ss_pred HHHHhhCCCC--CCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHH-HHHcCCCCceEEEECchhhc-cC
Confidence 4455554433 559999999999999988876 578888877544433332 2333543 67777776543 67
Q ss_pred CCCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 273 SRAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 273 d~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+++||+|+++. . ++..++.++.++|||||.+++..+
T Consensus 160 ~~~~D~v~~~~-----~-~~~~~l~~~~~~L~~gG~l~~~~~ 195 (255)
T 3mb5_A 160 EENVDHVILDL-----P-QPERVVEHAAKALKPGGFFVAYTP 195 (255)
T ss_dssp CCSEEEEEECS-----S-CGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CCCcCEEEECC-----C-CHHHHHHHHHHHcCCCCEEEEEEC
Confidence 78899999843 2 346789999999999999999865
No 261
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.84 E-value=5.2e-09 Score=106.71 Aligned_cols=95 Identities=11% Similarity=0.091 Sum_probs=70.1
Q ss_pred CCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHc-CC-CeEEEEcccccCCCCCCCeeEEEeccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALER-GV-PALIGVLAAERLPYPSRAFDMAHCSRC 284 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~er-g~-~~~~~v~d~~~Lpf~d~sFDlV~~~~~ 284 (626)
+.+|||+|||+|.++..+++. .++++|+++..+..+.. .+... +. .+.+...|... ++++++||+|++.
T Consensus 111 ~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi~~-- 186 (275)
T 1yb2_A 111 GMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMD-NLSEFYDIGNVRTSRSDIAD-FISDQMYDAVIAD-- 186 (275)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHH-HHHTTSCCTTEEEECSCTTT-CCCSCCEEEEEEC--
T ss_pred cCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHH-HHHhcCCCCcEEEEECchhc-cCcCCCccEEEEc--
Confidence 559999999999999988764 57888887754443332 22233 43 46677777665 6677899999983
Q ss_pred cccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 285 LIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 285 l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
.. ++..++.++.++|||||.+++..+
T Consensus 187 ---~~-~~~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 187 ---IP-DPWNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp ---CS-CGGGSHHHHHHTEEEEEEEEEEES
T ss_pred ---Cc-CHHHHHHHHHHHcCCCCEEEEEeC
Confidence 22 346899999999999999999875
No 262
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.84 E-value=6.2e-09 Score=102.31 Aligned_cols=119 Identities=9% Similarity=0.098 Sum_probs=83.6
Q ss_pred eeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHHHh----cc--cceeccccccCCC-CC-Cccceeeecc
Q 006905 471 RNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIYER----GL--VGTYTNWCEAMST-YP-RTYDLIHADS 540 (626)
Q Consensus 471 r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~r----gl--i~~~~~~~e~~~~-yp-~t~Dlih~~~ 540 (626)
..|||+|||.|.++..|++. +. +|+++|.++.++..+.++ |+ +.+++.-.+.+.. +| .+||.|++..
T Consensus 40 ~~vLDiGcG~G~~~~~la~~~p~~---~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~ 116 (213)
T 2fca_A 40 PIHIEVGTGKGQFISGMAKQNPDI---NYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNF 116 (213)
T ss_dssp CEEEEECCTTSHHHHHHHHHCTTS---EEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEES
T ss_pred ceEEEEecCCCHHHHHHHHHCCCC---CEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEEC
Confidence 46999999999999999875 44 899999999999988775 44 3344421222322 45 8999998742
Q ss_pred ccc-----cCCCCCCHHHHHHHhhhhccCCcEEEEE-cChHHHHHHHHHHHhCCCeeE
Q 006905 541 VFS-----LYKDRCETEDILLEMDRILRPEGGVIFR-DDVDELVKVKRIIDALKWQSQ 592 (626)
Q Consensus 541 ~f~-----~~~~~c~~~~~l~E~dRiLRPgG~~i~~-d~~~~~~~~~~~~~~l~w~~~ 592 (626)
... +...+-..+.+|.++.|+|||||.+++. |..+....+.+++....|...
T Consensus 117 ~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~~ 174 (213)
T 2fca_A 117 SDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLLT 174 (213)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEEE
T ss_pred CCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCccc
Confidence 211 1112222478999999999999999986 566666677776666667654
No 263
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.84 E-value=8.4e-09 Score=102.52 Aligned_cols=107 Identities=14% Similarity=0.125 Sum_probs=76.2
Q ss_pred HHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEccccc-CC-C
Q 006905 200 DIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAER-LP-Y 271 (626)
Q Consensus 200 ~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~-Lp-f 271 (626)
.+..++.... ..+|||||||+|.++..|++. .++++|+++..+..+.. .....++ .+.+..+|+.. ++ .
T Consensus 62 ~l~~~~~~~~--~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~~~~~ 138 (232)
T 3ntv_A 62 LIKQLIRMNN--VKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQ-NLATYHFENQVRIIEGNALEQFENV 138 (232)
T ss_dssp HHHHHHHHHT--CCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHH-HHHHTTCTTTEEEEESCGGGCHHHH
T ss_pred HHHHHHhhcC--CCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCcEEEEECCHHHHHHhh
Confidence 3444443333 458999999999999999883 68889988765554433 3334454 47788888654 34 4
Q ss_pred CCCCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEe
Q 006905 272 PSRAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 272 ~d~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
.+++||+|++... ......++.++.++|||||+|++..
T Consensus 139 ~~~~fD~V~~~~~----~~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 139 NDKVYDMIFIDAA----KAQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp TTSCEEEEEEETT----SSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred ccCCccEEEEcCc----HHHHHHHHHHHHHhcCCCeEEEEee
Confidence 4689999997653 2334779999999999999998864
No 264
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.83 E-value=2.5e-09 Score=109.36 Aligned_cols=121 Identities=8% Similarity=0.049 Sum_probs=83.1
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhc------------------ccc--------------
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERG------------------LVG-------------- 517 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rg------------------li~-------------- 517 (626)
-.+|||+|||+|.++..++..+.. +|+.+|.++.|++.+.++- +.|
T Consensus 72 ~~~vLDiGcG~G~~~~l~~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 72 GRTLIDIGSGPTVYQLLSACSHFE--DITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CSEEEEETCTTCCGGGTTGGGGCS--EEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCeEEEECCCcChHHHHhhccCCC--eEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 468999999999965544443222 8999999999998876631 111
Q ss_pred ----eec-cccccCC----CCC-CccceeeeccccccCCCC-CCHHHHHHHhhhhccCCcEEEEEcCh------------
Q 006905 518 ----TYT-NWCEAMS----TYP-RTYDLIHADSVFSLYKDR-CETEDILLEMDRILRPEGGVIFRDDV------------ 574 (626)
Q Consensus 518 ----~~~-~~~e~~~----~yp-~t~Dlih~~~~f~~~~~~-c~~~~~l~E~dRiLRPgG~~i~~d~~------------ 574 (626)
+.+ |..+..+ .+| .+||+|.|..+|.+.... -+...+|.|+.|+|||||+|++.+..
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~ 229 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARL 229 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeee
Confidence 111 2222111 244 779999999998874431 25678999999999999999996311
Q ss_pred ----HHHHHHHHHHHhCCCeeE
Q 006905 575 ----DELVKVKRIIDALKWQSQ 592 (626)
Q Consensus 575 ----~~~~~~~~~~~~l~w~~~ 592 (626)
-....+++++..-.++..
T Consensus 230 ~~~~~~~~~l~~~l~~aGf~~~ 251 (289)
T 2g72_A 230 TVVPVSEEEVREALVRSGYKVR 251 (289)
T ss_dssp ECCCCCHHHHHHHHHHTTEEEE
T ss_pred eeccCCHHHHHHHHHHcCCeEE
Confidence 135678888887777765
No 265
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.82 E-value=1.7e-08 Score=101.12 Aligned_cols=133 Identities=19% Similarity=0.165 Sum_probs=89.6
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc-cce-----ecccc-ccCCCCCCccceeeecccc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL-VGT-----YTNWC-EAMSTYPRTYDLIHADSVF 542 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl-i~~-----~~~~~-e~~~~yp~t~Dlih~~~~f 542 (626)
-.+|||+|||+|+|+..|++.+.. .|+++|.+++|+..+.++.- +.. ....+ +.+.. .-||.+.++.+|
T Consensus 38 g~~VLDiGcGtG~~t~~la~~g~~--~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~D~v~ 113 (232)
T 3opn_A 38 GKTCLDIGSSTGGFTDVMLQNGAK--LVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ--GRPSFTSIDVSF 113 (232)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCS--EEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS--CCCSEEEECCSS
T ss_pred CCEEEEEccCCCHHHHHHHhcCCC--EEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCc--CCCCEEEEEEEh
Confidence 457999999999999999998742 79999999999999877542 111 11111 22221 124555555555
Q ss_pred ccCCCCCCHHHHHHHhhhhccCCcEEEEEc-------------------Ch---HHHHHHHHHHHhCCCeeEEeecC--C
Q 006905 543 SLYKDRCETEDILLEMDRILRPEGGVIFRD-------------------DV---DELVKVKRIIDALKWQSQIVDHE--D 598 (626)
Q Consensus 543 ~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d-------------------~~---~~~~~~~~~~~~l~w~~~~~~~e--~ 598 (626)
... ..+|.|+.|+|||||.+++.. .. .....+.+++....|++.-.+.. .
T Consensus 114 ~~l------~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~~pi~ 187 (232)
T 3opn_A 114 ISL------DLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTFSPIK 187 (232)
T ss_dssp SCG------GGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEECSSC
T ss_pred hhH------HHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEEccCC
Confidence 443 679999999999999999861 11 23567778888888887754422 2
Q ss_pred CCC-CcceEEEEEec
Q 006905 599 GPL-EREKLLFAVKL 612 (626)
Q Consensus 599 ~~~-~~e~~l~~~K~ 612 (626)
|+. +.|.++.++|.
T Consensus 188 g~~gn~e~l~~~~~~ 202 (232)
T 3opn_A 188 GGAGNVEFLVHLLKD 202 (232)
T ss_dssp BTTTBCCEEEEEEES
T ss_pred CCCCCHHHHHHHhhc
Confidence 222 45777777773
No 266
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.82 E-value=6.4e-09 Score=98.15 Aligned_cols=115 Identities=17% Similarity=0.214 Sum_probs=86.6
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc---cceec-cccccCCCCCCccceeeeccc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL---VGTYT-NWCEAMSTYPRTYDLIHADSV 541 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~-~~~e~~~~yp~t~Dlih~~~~ 541 (626)
-.+|||+|||.|.++..|++.. .+|+.+|.++.+++.+.++ |+ +.+.+ |+.+.+... .+||+|.+..+
T Consensus 34 ~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~D~v~~~~~ 109 (192)
T 1l3i_A 34 NDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKI-PDIDIAVVGGS 109 (192)
T ss_dssp TCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTS-CCEEEEEESCC
T ss_pred CCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccC-CCCCEEEECCc
Confidence 4689999999999999999987 4899999998999888774 32 23332 222212211 58999999766
Q ss_pred cccCCCCCCHHHHHHHhhhhccCCcEEEEEcC-hHHHHHHHHHHHhCCCeeEEe
Q 006905 542 FSLYKDRCETEDILLEMDRILRPEGGVIFRDD-VDELVKVKRIIDALKWQSQIV 594 (626)
Q Consensus 542 f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~-~~~~~~~~~~~~~l~w~~~~~ 594 (626)
+. ++..+|.++.|+|+|||.+++.+. .+....+.++++...|++...
T Consensus 110 ~~------~~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~ 157 (192)
T 1l3i_A 110 GG------ELQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGFDVNIT 157 (192)
T ss_dssp TT------CHHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTCCCEEE
T ss_pred hH------HHHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCCceEEE
Confidence 53 458899999999999999999764 466778888888877765543
No 267
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.82 E-value=1.4e-08 Score=102.20 Aligned_cols=98 Identities=17% Similarity=0.114 Sum_probs=71.2
Q ss_pred CCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEccccc-CCCC--CCCeeEEEe
Q 006905 212 IRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAER-LPYP--SRAFDMAHC 281 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~-Lpf~--d~sFDlV~~ 281 (626)
+.+|||||||+|..+..|++. .++++|+++..+..+.. .+.+.++ .+.+..+|+.. ++.. .++||+|++
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~-~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~ 142 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARE-NLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFI 142 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHH-HHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEE
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEE
Confidence 458999999999999999875 58888887755544333 3334454 36777777544 4432 348999998
Q ss_pred ccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 282 SRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 282 ~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
... ......++.++.++|||||++++...
T Consensus 143 d~~----~~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 143 DAD----KPNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp CSC----GGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred CCc----hHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 653 23346799999999999999998743
No 268
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.81 E-value=1.2e-08 Score=105.91 Aligned_cols=102 Identities=12% Similarity=0.112 Sum_probs=70.3
Q ss_pred CCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHH-----cCCCeEEEEccccc-CCCCCCCeeEEE
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALE-----RGVPALIGVLAAER-LPYPSRAFDMAH 280 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~e-----rg~~~~~~v~d~~~-Lpf~d~sFDlV~ 280 (626)
..++|||||||+|.++..+++. .++++|+++..+..+...+... ....+.+.++|... ++..+++||+|+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 3569999999999999999886 4889999886665544433322 12346677777544 444578899999
Q ss_pred eccccccccccH----HHHHHHHHhcccCCeEEEEEe
Q 006905 281 CSRCLIPWNQFG----GIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 281 ~~~~l~h~~~~~----~~~L~Ei~RvLKPGG~lvis~ 313 (626)
+.... ++.... ..+++++.|+|||||.|++..
T Consensus 163 ~D~~~-p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 163 SDCTD-PIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp ECC-----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred ECCCC-ccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 96543 332211 579999999999999999964
No 269
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.81 E-value=1.6e-08 Score=99.54 Aligned_cols=98 Identities=16% Similarity=0.148 Sum_probs=68.2
Q ss_pred CCCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccC---CCCCCCeeEEEec
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERL---PYPSRAFDMAHCS 282 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~L---pf~d~sFDlV~~~ 282 (626)
++.+|||+|||+|.++..|+++ .++++|+++.++.. +.+.+..+ ..+.+..+|.... ....++||+|++.
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~-~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRE-LVPIVEER-RNIVPILGDATKPEEYRALVPKVDVIFED 150 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHH-HHHHHSSC-TTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHH-HHHHHhcc-CCCEEEEccCCCcchhhcccCCceEEEEC
Confidence 3568999999999999988864 57888887754432 22233222 4567777776552 1123589999986
Q ss_pred cccccccccHHHHHHHHHhcccCCeEEEEEe
Q 006905 283 RCLIPWNQFGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 283 ~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
.. .......++.++.++|||||++++..
T Consensus 151 ~~---~~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 151 VA---QPTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp CC---STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CC---CHhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 54 22222456999999999999999973
No 270
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.81 E-value=2.3e-08 Score=100.11 Aligned_cols=91 Identities=9% Similarity=0.099 Sum_probs=59.6
Q ss_pred CCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCCCeEEEE-ccc-----ccCCCCCCCeeEEEec
Q 006905 212 IRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGVPALIGV-LAA-----ERLPYPSRAFDMAHCS 282 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~~~~~~v-~d~-----~~Lpf~d~sFDlV~~~ 282 (626)
+.+|||||||+|.++..|+++ .|+++|+++.++.. +.++........ .+. ..++ ...||.+.+.
T Consensus 38 g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~-----a~~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~~~~D 110 (232)
T 3opn_A 38 GKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAW-----KIRSDERVVVMEQFNFRNAVLADFE--QGRPSFTSID 110 (232)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCH-----HHHTCTTEEEECSCCGGGCCGGGCC--SCCCSEEEEC
T ss_pred CCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHH-----HHHhCccccccccceEEEeCHhHcC--cCCCCEEEEE
Confidence 558999999999999999886 57899998877653 333332222111 111 1222 1124554444
Q ss_pred cccccccccHHHHHHHHHhcccCCeEEEEEe
Q 006905 283 RCLIPWNQFGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 283 ~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
.++.+. ..+|.++.|+|||||.|++..
T Consensus 111 ~v~~~l----~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 111 VSFISL----DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp CSSSCG----GGTHHHHHHHSCTTCEEEEEE
T ss_pred EEhhhH----HHHHHHHHHhccCCCEEEEEE
Confidence 444332 568999999999999999975
No 271
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.81 E-value=1.4e-08 Score=99.50 Aligned_cols=98 Identities=17% Similarity=0.153 Sum_probs=70.2
Q ss_pred CCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcCCC--eEEEEccccc-CCC-C----CCCeeE
Q 006905 212 IRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERGVP--ALIGVLAAER-LPY-P----SRAFDM 278 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg~~--~~~~v~d~~~-Lpf-~----d~sFDl 278 (626)
..+|||||||+|.++..|++. .++++|+++..+..+... ....+.. +.+..+|... ++. . .++||+
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEY-WEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDL 143 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHH-HHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEE
T ss_pred CCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHH-HHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccE
Confidence 448999999999999999875 588888877555443333 3344543 6777777533 321 1 178999
Q ss_pred EEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 279 AHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 279 V~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
|++... ......++.++.++|||||+|++...
T Consensus 144 v~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 144 IYIDAD----KANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp EEECSC----GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EEECCC----HHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 997553 33457899999999999999999743
No 272
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.81 E-value=1.6e-08 Score=99.54 Aligned_cols=96 Identities=18% Similarity=0.173 Sum_probs=62.8
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHH----HHHHhccccee-cccccc--CCCCCCccceeeecccc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLG----VIYERGLVGTY-TNWCEA--MSTYPRTYDLIHADSVF 542 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~----~~~~rgli~~~-~~~~e~--~~~yp~t~Dlih~~~~f 542 (626)
-.+|||+|||+|.++..|++..- .-.|+++|.++.+++ .+.++.-+... .|..+. +..++.+||+|.++.
T Consensus 58 g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~-- 134 (210)
T 1nt2_A 58 DERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQDI-- 134 (210)
T ss_dssp SCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEECC--
T ss_pred CCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEec--
Confidence 45799999999999998876510 116899999987554 33333212222 222221 123458999999962
Q ss_pred ccCCCCCCHHHHHHHhhhhccCCcEEEEE
Q 006905 543 SLYKDRCETEDILLEMDRILRPEGGVIFR 571 (626)
Q Consensus 543 ~~~~~~c~~~~~l~E~dRiLRPgG~~i~~ 571 (626)
. ..-....+|.|+.|+|||||.+++.
T Consensus 135 ~---~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 135 A---QKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp C---STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred c---ChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 1 1112344689999999999999997
No 273
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.81 E-value=2.3e-08 Score=105.79 Aligned_cols=115 Identities=16% Similarity=-0.001 Sum_probs=82.9
Q ss_pred HHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhh-----CCcEEEeCCccchHHHHHHHHHHcCC-CeEEEEcccccCC
Q 006905 197 YIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLS-----RNIITMSFAPRDTHEAQVQFALERGV-PALIGVLAAERLP 270 (626)
Q Consensus 197 yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~-----~~V~avdis~~dls~a~i~~A~erg~-~~~~~v~d~~~Lp 270 (626)
....+..++...+ +.+|||+|||+|.++..++. ..++++|+++.++..+.. .+...++ .+.+.+.|+..++
T Consensus 191 la~~l~~~~~~~~--~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~-n~~~~g~~~i~~~~~D~~~~~ 267 (354)
T 3tma_A 191 LAQALLRLADARP--GMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLARE-AALASGLSWIRFLRADARHLP 267 (354)
T ss_dssp HHHHHHHHTTCCT--TCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHH-HHHHTTCTTCEEEECCGGGGG
T ss_pred HHHHHHHHhCCCC--CCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHH-HHHHcCCCceEEEeCChhhCc
Confidence 3334444444333 45899999999999888876 479999998866654443 3444555 4788888998888
Q ss_pred CCCCCeeEEEeccccccccc-------cHHHHHHHHHhcccCCeEEEEEeC
Q 006905 271 YPSRAFDMAHCSRCLIPWNQ-------FGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 271 f~d~sFDlV~~~~~l~h~~~-------~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
.+.+.||+|+++..+..... ....++.++.++|||||.+++..+
T Consensus 268 ~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 268 RFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp GTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred cccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 77778999999875522111 115789999999999999999865
No 274
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.81 E-value=1.1e-08 Score=101.50 Aligned_cols=96 Identities=14% Similarity=0.130 Sum_probs=70.0
Q ss_pred CCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcCCC---eEEEEccccc-CC-CCCCCeeEEEe
Q 006905 212 IRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERGVP---ALIGVLAAER-LP-YPSRAFDMAHC 281 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg~~---~~~~v~d~~~-Lp-f~d~sFDlV~~ 281 (626)
..+|||||||+|..+..|++. .++++|+++..+..+.. ...+.+.. +.+..+|+.. ++ +++++||+|++
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~-~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~ 135 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKA-LFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFG 135 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHH-HHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEE
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-HHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEE
Confidence 348999999999999988873 58899988865554433 33344544 6677777543 33 34689999998
Q ss_pred ccccccccccHHHHHHHHHhcccCCeEEEEE
Q 006905 282 SRCLIPWNQFGGIYLIEVDRVLRPGGYWILS 312 (626)
Q Consensus 282 ~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis 312 (626)
.... .....++.++.++|||||++++.
T Consensus 136 d~~~----~~~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 136 QVSP----MDLKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp CCCT----TTHHHHHHHHHHHEEEEEEEEET
T ss_pred cCcH----HHHHHHHHHHHHHcCCCcEEEEe
Confidence 6532 33467899999999999999995
No 275
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.81 E-value=5.2e-09 Score=100.76 Aligned_cols=140 Identities=10% Similarity=0.044 Sum_probs=83.3
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc-----cceec-cccccCCC---CCCccceeeecc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL-----VGTYT-NWCEAMST---YPRTYDLIHADS 540 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl-----i~~~~-~~~e~~~~---yp~t~Dlih~~~ 540 (626)
-.+|||+|||.|.++..|++..- ..+|+.+|.++.++..+.++-- +.+++ |+.+.+.. .+.+||+|.++.
T Consensus 31 ~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~np 109 (215)
T 4dzr_A 31 GTRVIDVGTGSGCIAVSIALACP-GVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVSNP 109 (215)
T ss_dssp TEEEEEEESSBCHHHHHHHHHCT-TEEEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSEEEECC
T ss_pred CCEEEEecCCHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEECC
Confidence 56899999999999999988721 1278999999899988776531 22332 44443322 238999999975
Q ss_pred ccccCCCC-------------CC----------HHHHHHHhhhhccCCcE-EEEEcChHHHHHHHHHHH--hCCCeeEEe
Q 006905 541 VFSLYKDR-------------CE----------TEDILLEMDRILRPEGG-VIFRDDVDELVKVKRIID--ALKWQSQIV 594 (626)
Q Consensus 541 ~f~~~~~~-------------c~----------~~~~l~E~dRiLRPgG~-~i~~d~~~~~~~~~~~~~--~l~w~~~~~ 594 (626)
-|...... .. +..++.++.|+|||||+ +++.-.......+.+++. ...|.....
T Consensus 110 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~~~gf~~~~~ 189 (215)
T 4dzr_A 110 PYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHNQADEVARLFAPWRERGFRVRK 189 (215)
T ss_dssp CCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTSCHHHHHHHTGGGGGGTEECCE
T ss_pred CCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCccHHHHHHHHHHhhcCCceEEE
Confidence 55322110 01 16789999999999999 777655556677778777 666654321
Q ss_pred ecCCCCCCcceEEEEEec
Q 006905 595 DHEDGPLEREKLLFAVKL 612 (626)
Q Consensus 595 ~~e~~~~~~e~~l~~~K~ 612 (626)
-.. ..+.+++++++|.
T Consensus 190 ~~~--~~~~~r~~~~~~~ 205 (215)
T 4dzr_A 190 VKD--LRGIDRVIAVTRE 205 (215)
T ss_dssp EEC--TTSCEEEEEEEEC
T ss_pred EEe--cCCCEEEEEEEEc
Confidence 111 2245789988874
No 276
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.80 E-value=9.8e-09 Score=113.54 Aligned_cols=111 Identities=12% Similarity=0.097 Sum_probs=78.6
Q ss_pred HHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccccCCC
Q 006905 197 YIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAERLPY 271 (626)
Q Consensus 197 yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~Lpf 271 (626)
|.+.+.+.+... .+.+|||||||+|.++..+++. .|+++|+++ ++. .+.+.+...++ .+.+..+|...+++
T Consensus 146 ~~~~il~~l~~~--~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~-~A~~~~~~~gl~~~v~~~~~d~~~~~~ 221 (480)
T 3b3j_A 146 YQRAILQNHTDF--KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQ-HAEVLVKSNNLTDRIVVIPGKVEEVSL 221 (480)
T ss_dssp HHHHHHHTGGGT--TTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHH-HHHHHHHHTTCTTTEEEEESCTTTCCC
T ss_pred HHHHHHHhhhhc--CCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHH-HHHHHHHHcCCCCcEEEEECchhhCcc
Confidence 334444444333 3458999999999999998876 578888865 442 23334444554 47788888877776
Q ss_pred CCCCeeEEEecccccccccc-HHHHHHHHHhcccCCeEEEEE
Q 006905 272 PSRAFDMAHCSRCLIPWNQF-GGIYLIEVDRVLRPGGYWILS 312 (626)
Q Consensus 272 ~d~sFDlV~~~~~l~h~~~~-~~~~L~Ei~RvLKPGG~lvis 312 (626)
+ ++||+|+|+..++++... ....+.++.++|||||++++.
T Consensus 222 ~-~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 222 P-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp S-SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred C-CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 5 589999998876666533 356777899999999999864
No 277
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.80 E-value=8.9e-09 Score=103.11 Aligned_cols=93 Identities=12% Similarity=0.024 Sum_probs=69.9
Q ss_pred CCEEEEeCCCCchHHHHHhhC--------CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccC---CCCC-CCeeEE
Q 006905 212 IRTAIDTGCGVASWGAYLLSR--------NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERL---PYPS-RAFDMA 279 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~--------~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~L---pf~d-~sFDlV 279 (626)
..+|||||||+|..+..|++. .|+++|+++.++..+. .....+.+..+|...+ ++.+ .+||+|
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~-----~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I 156 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA-----SDMENITLHQGDCSDLTTFEHLREMAHPLI 156 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG-----GGCTTEEEEECCSSCSGGGGGGSSSCSSEE
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh-----ccCCceEEEECcchhHHHHHhhccCCCCEE
Confidence 358999999999999888763 5899999886654322 2234577888887663 5443 479999
Q ss_pred EeccccccccccHHHHHHHHHh-cccCCeEEEEEe
Q 006905 280 HCSRCLIPWNQFGGIYLIEVDR-VLRPGGYWILSG 313 (626)
Q Consensus 280 ~~~~~l~h~~~~~~~~L~Ei~R-vLKPGG~lvis~ 313 (626)
++... | .+...+|.++.| +|||||+|++..
T Consensus 157 ~~d~~--~--~~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 157 FIDNA--H--ANTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp EEESS--C--SSHHHHHHHHHHHTCCTTCEEEECS
T ss_pred EECCc--h--HhHHHHHHHHHHhhCCCCCEEEEEe
Confidence 98664 3 245789999998 999999999974
No 278
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.80 E-value=1.2e-08 Score=103.95 Aligned_cols=135 Identities=12% Similarity=0.208 Sum_probs=94.5
Q ss_pred ceeEEeccCchhhHhhhhhCC-CeEEEEeccCccCcccHHHHHHh----cc--cceec-cccccCCCCCCccceeeeccc
Q 006905 470 YRNILDMNAHLGGFAAALIDF-PVWVMNVVPAEAKINTLGVIYER----GL--VGTYT-NWCEAMSTYPRTYDLIHADSV 541 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~-~v~~mnv~~~~~~~~~l~~~~~r----gl--i~~~~-~~~e~~~~yp~t~Dlih~~~~ 541 (626)
-.+|||+|||.|.++..|++. +- .+|+.+|.++.++.++.++ |+ +.+++ |+.+.+. +.+||+|.++--
T Consensus 110 ~~~vLDlG~GsG~~~~~la~~~~~--~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~--~~~fD~Iv~npP 185 (276)
T 2b3t_A 110 PCRILDLGTGTGAIALALASERPD--CEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA--GQQFAMIVSNPP 185 (276)
T ss_dssp CCEEEEETCTTSHHHHHHHHHCTT--SEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT--TCCEEEEEECCC
T ss_pred CCEEEEecCCccHHHHHHHHhCCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcc--cCCccEEEECCC
Confidence 347999999999999999853 22 2789999999999988776 33 33333 4433221 489999999733
Q ss_pred cc-------------cCCCC---------CCHHHHHHHhhhhccCCcEEEEEcChHHHHHHHHHHHhCCCeeE-EeecCC
Q 006905 542 FS-------------LYKDR---------CETEDILLEMDRILRPEGGVIFRDDVDELVKVKRIIDALKWQSQ-IVDHED 598 (626)
Q Consensus 542 f~-------------~~~~~---------c~~~~~l~E~dRiLRPgG~~i~~d~~~~~~~~~~~~~~l~w~~~-~~~~e~ 598 (626)
+. +.... ..+..++.++.|+|||||++++.........++++++...|+.. +..
T Consensus 186 y~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~v~~~~--- 262 (276)
T 2b3t_A 186 YIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCR--- 262 (276)
T ss_dssp CBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSCHHHHHHHHHHTTCTTCCEEE---
T ss_pred CCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchHHHHHHHHHHHCCCcEEEEEe---
Confidence 32 22111 13467899999999999999998777667788888887777543 221
Q ss_pred CCCCcceEEEEEe
Q 006905 599 GPLEREKLLFAVK 611 (626)
Q Consensus 599 ~~~~~e~~l~~~K 611 (626)
.-.+.+++++++|
T Consensus 263 d~~g~~r~~~~~~ 275 (276)
T 2b3t_A 263 DYGDNERVTLGRY 275 (276)
T ss_dssp CTTSSEEEEEEEC
T ss_pred cCCCCCcEEEEEE
Confidence 1225678888875
No 279
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.80 E-value=1.5e-08 Score=99.05 Aligned_cols=121 Identities=13% Similarity=0.167 Sum_probs=86.0
Q ss_pred ceeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHHHh----cc--cceec-cccccCCC-CC-Cccceeee
Q 006905 470 YRNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIYER----GL--VGTYT-NWCEAMST-YP-RTYDLIHA 538 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~r----gl--i~~~~-~~~e~~~~-yp-~t~Dlih~ 538 (626)
-..|||+|||.|.++..|++. +. +|+.+|.++.++..+.++ |+ +.+++ |+. .+.. +| .+||+|++
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p~~---~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~-~~~~~~~~~~~D~i~~ 117 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNPDI---NYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGS-DLTDYFEDGEIDRLYL 117 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSS-CGGGTSCTTCCSEEEE
T ss_pred CCeEEEEccCcCHHHHHHHHHCCCC---CEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHH-HHHhhcCCCCCCEEEE
Confidence 346999999999999999876 33 899999999999988775 33 33333 322 2332 54 89999998
Q ss_pred ccccccCC-----CCCCHHHHHHHhhhhccCCcEEEEE-cChHHHHHHHHHHHhCCCeeEEe
Q 006905 539 DSVFSLYK-----DRCETEDILLEMDRILRPEGGVIFR-DDVDELVKVKRIIDALKWQSQIV 594 (626)
Q Consensus 539 ~~~f~~~~-----~~c~~~~~l~E~dRiLRPgG~~i~~-d~~~~~~~~~~~~~~l~w~~~~~ 594 (626)
+....... .+-..+.+|.++.|+|||||.+++. |..+....+.+++....|.....
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~ 179 (214)
T 1yzh_A 118 NFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLNGV 179 (214)
T ss_dssp ESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEEEE
T ss_pred ECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeeeec
Confidence 74322111 1123468999999999999999996 45566777777777777876543
No 280
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.79 E-value=1.2e-08 Score=103.25 Aligned_cols=126 Identities=16% Similarity=0.121 Sum_probs=93.2
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc-cceec-cccccCCCCC-Cccceeeecccc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL-VGTYT-NWCEAMSTYP-RTYDLIHADSVF 542 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl-i~~~~-~~~e~~~~yp-~t~Dlih~~~~f 542 (626)
-.+|||+|||.|.++.++++.+. +|+.+|.++.+++.+.++ |+ +.+++ ++.+. +| .+||+|.++.++
T Consensus 121 ~~~VLDiGcG~G~l~~~la~~g~---~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~---~~~~~fD~Vv~n~~~ 194 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAEKLGG---KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA---LPFGPFDLLVANLYA 194 (254)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC---EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH---GGGCCEEEEEEECCH
T ss_pred CCEEEEecCCCcHHHHHHHHhCC---eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc---CcCCCCCEEEECCcH
Confidence 35899999999999999999876 899999999999988875 33 33333 22222 44 789999996544
Q ss_pred ccCCCCCCHHHHHHHhhhhccCCcEEEEEcC-hHHHHHHHHHHHhCCCeeEEeecCCCCCCcceEEEEEe
Q 006905 543 SLYKDRCETEDILLEMDRILRPEGGVIFRDD-VDELVKVKRIIDALKWQSQIVDHEDGPLEREKLLFAVK 611 (626)
Q Consensus 543 ~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~-~~~~~~~~~~~~~l~w~~~~~~~e~~~~~~e~~l~~~K 611 (626)
. .+..++.++.|+|||||++++++. ......+.+.++...++....... +.-..|+++|
T Consensus 195 ~------~~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf~~~~~~~~----~~W~~l~~~k 254 (254)
T 2nxc_A 195 E------LHAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEEAAE----GEWVLLAYGR 254 (254)
T ss_dssp H------HHHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEEEEEEEE----TTEEEEEEEC
T ss_pred H------HHHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCCCEEEEEecc----CCeEEEEEEC
Confidence 3 256899999999999999999864 345778888888888887644333 2234555554
No 281
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.77 E-value=4.6e-09 Score=105.27 Aligned_cols=116 Identities=15% Similarity=0.206 Sum_probs=72.0
Q ss_pred HHHHHHHHhhccCC---CCCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCCC--eEEEEccc
Q 006905 196 AYIDDIGKLINLND---GSIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGVP--ALIGVLAA 266 (626)
Q Consensus 196 ~yi~~L~~ll~l~~---~~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~~--~~~~v~d~ 266 (626)
.+...+..++.... ..+.+|||+|||+|.++..|+.+ .++++|+++.++..+..+ +...++. +.+..+|.
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~~~v~~~~~d~ 125 (254)
T 2h00_A 47 NYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKN-VEQNNLSDLIKVVKVPQ 125 (254)
T ss_dssp HHHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHH-HHHTTCTTTEEEEECCT
T ss_pred HHHHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHH-HHHcCCCccEEEEEcch
Confidence 34444445544222 23568999999999988888764 688999988666544433 3344543 67777775
Q ss_pred ccC---CCC---CCCeeEEEeccccccccc--------------cHHHHHHHHHhcccCCeEEEEE
Q 006905 267 ERL---PYP---SRAFDMAHCSRCLIPWNQ--------------FGGIYLIEVDRVLRPGGYWILS 312 (626)
Q Consensus 267 ~~L---pf~---d~sFDlV~~~~~l~h~~~--------------~~~~~L~Ei~RvLKPGG~lvis 312 (626)
... +++ +++||+|+|+..+++... ....++.++.|+|||||.+.+.
T Consensus 126 ~~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 126 KTLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp TCSSTTTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHHH
T ss_pred hhhhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEE
Confidence 542 444 368999999876644320 0124567889999999988664
No 282
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.77 E-value=9.9e-09 Score=108.33 Aligned_cols=93 Identities=13% Similarity=0.071 Sum_probs=71.2
Q ss_pred CCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCCCeeEEEecccccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSRAFDMAHCSRCLIP 287 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h 287 (626)
..+|||||||+|.++..++++ .++++|+ + .+++.+++. ..+.+..+|... ++++ ||+|++..++||
T Consensus 189 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~-----~~~~~a~~~-~~v~~~~~d~~~-~~p~--~D~v~~~~~lh~ 258 (352)
T 1fp2_A 189 LESIVDVGGGTGTTAKIICETFPKLKCIVFDR-P-----QVVENLSGS-NNLTYVGGDMFT-SIPN--ADAVLLKYILHN 258 (352)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-H-----HHHTTCCCB-TTEEEEECCTTT-CCCC--CSEEEEESCGGG
T ss_pred CceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-H-----HHHhhcccC-CCcEEEeccccC-CCCC--ccEEEeehhhcc
Confidence 468999999999999999875 4666666 4 344444432 236777777654 5553 999999999988
Q ss_pred ccccH-HHHHHHHHhcccC---CeEEEEEeC
Q 006905 288 WNQFG-GIYLIEVDRVLRP---GGYWILSGP 314 (626)
Q Consensus 288 ~~~~~-~~~L~Ei~RvLKP---GG~lvis~p 314 (626)
|.+.. ..+|+++.|+||| ||++++...
T Consensus 259 ~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 289 (352)
T 1fp2_A 259 WTDKDCLRILKKCKEAVTNDGKRGKVTIIDM 289 (352)
T ss_dssp SCHHHHHHHHHHHHHHHSGGGCCCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 87642 3899999999999 999999754
No 283
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.77 E-value=1.8e-09 Score=111.25 Aligned_cols=100 Identities=17% Similarity=0.225 Sum_probs=74.9
Q ss_pred ceeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHHHhcc--------------------------------
Q 006905 470 YRNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIYERGL-------------------------------- 515 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~rgl-------------------------------- 515 (626)
-.+|||+|||.|.++..|++. +. +|+.+|.++.+++.+.++--
T Consensus 47 ~~~VLDiGCG~G~~~~~la~~~~~~---~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (292)
T 3g07_A 47 GRDVLDLGCNVGHLTLSIACKWGPS---RMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKR 123 (292)
T ss_dssp TSEEEEESCTTCHHHHHHHHHTCCS---EEEEEESCHHHHHHHHHTC---------------------------------
T ss_pred CCcEEEeCCCCCHHHHHHHHHcCCC---EEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccc
Confidence 468999999999999999886 44 89999999999999887621
Q ss_pred --------------------------------cceec-ccccc---CCC-CCCccceeeeccccccCC---CCCCHHHHH
Q 006905 516 --------------------------------VGTYT-NWCEA---MST-YPRTYDLIHADSVFSLYK---DRCETEDIL 555 (626)
Q Consensus 516 --------------------------------i~~~~-~~~e~---~~~-yp~t~Dlih~~~~f~~~~---~~c~~~~~l 555 (626)
+..++ |+... +.. .+.+||+|.|..++.+.+ ...++..+|
T Consensus 124 ~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l 203 (292)
T 3g07_A 124 SCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMF 203 (292)
T ss_dssp ------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred ccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHH
Confidence 12222 22111 111 248999999988875543 334668899
Q ss_pred HHhhhhccCCcEEEEEc
Q 006905 556 LEMDRILRPEGGVIFRD 572 (626)
Q Consensus 556 ~E~dRiLRPgG~~i~~d 572 (626)
.++.|+|||||++|+..
T Consensus 204 ~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 204 RRIYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHHHEEEEEEEEEEC
T ss_pred HHHHHHhCCCcEEEEec
Confidence 99999999999999974
No 284
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.77 E-value=1e-08 Score=96.83 Aligned_cols=129 Identities=16% Similarity=0.141 Sum_probs=88.8
Q ss_pred CceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc--cceeccccccCCC--CC-Cccceeeeccccc
Q 006905 469 RYRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL--VGTYTNWCEAMST--YP-RTYDLIHADSVFS 543 (626)
Q Consensus 469 ~~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl--i~~~~~~~e~~~~--yp-~t~Dlih~~~~f~ 543 (626)
.-..|||+|||. +.+|.++.|++.+.++.- +...+.=.+.+.. +| ++||+|.|..++.
T Consensus 12 ~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~ 74 (176)
T 2ld4_A 12 AGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVPG 74 (176)
T ss_dssp TTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCSTT
T ss_pred CCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChhh
Confidence 356799999985 238889999999998842 3333322333433 35 8999999999988
Q ss_pred cC-CCCCCHHHHHHHhhhhccCCcEEEEEcChH----------HHHHHHHHHHhCCCeeEEeecCCCCCC----------
Q 006905 544 LY-KDRCETEDILLEMDRILRPEGGVIFRDDVD----------ELVKVKRIIDALKWQSQIVDHEDGPLE---------- 602 (626)
Q Consensus 544 ~~-~~~c~~~~~l~E~dRiLRPgG~~i~~d~~~----------~~~~~~~~~~~l~w~~~~~~~e~~~~~---------- 602 (626)
+. . +.+.+|.|+.|+|||||++++.+... ....+.+.++.-.+ +.+.+....+..
T Consensus 75 ~~~~---~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf-i~~~~~~~~~~~~~~~~~~~~~ 150 (176)
T 2ld4_A 75 STTL---HSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL-VEVKELQREPLTPEEVQSVREH 150 (176)
T ss_dssp CCCC---CCHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC-EEEEEEEEECCCHHHHHHHHHH
T ss_pred hccc---CHHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC-cEeecCcccCCCHHHHHHHHHH
Confidence 87 4 45899999999999999999975421 15677777776666 444332211111
Q ss_pred --------cceEEEEEecccCCCc
Q 006905 603 --------REKLLFAVKLYWTAPA 618 (626)
Q Consensus 603 --------~e~~l~~~K~~w~~~~ 618 (626)
.-.+++++|+-|..++
T Consensus 151 ~g~~~~~~~~~~~~a~Kp~~~~gs 174 (176)
T 2ld4_A 151 LGHESDNLLFVQITGKKPNFEVGS 174 (176)
T ss_dssp TCCCCSSEEEEEEEEECCCSSCCS
T ss_pred hcccCCceEEEEEeccCCcccccC
Confidence 1457899998887654
No 285
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.77 E-value=8.6e-09 Score=103.28 Aligned_cols=116 Identities=14% Similarity=0.113 Sum_probs=79.2
Q ss_pred ceeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHHHh----------cc--cceecccccc-CCC-CC-Cc
Q 006905 470 YRNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIYER----------GL--VGTYTNWCEA-MST-YP-RT 532 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~r----------gl--i~~~~~~~e~-~~~-yp-~t 532 (626)
-..|||+|||.|.++..|++. +. +|+++|.++.++..+.++ ++ +.+++.-.+. +.. +| .+
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~p~~---~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSPLFPDT---LILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGGGSTTS---EEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTC
T ss_pred CCeEEEEccCCcHHHHHHHHHCCCC---eEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcC
Confidence 467999999999999999876 33 899999999999987653 33 3333321222 221 45 89
Q ss_pred cceeeeccccc-----cCCCCCCHHHHHHHhhhhccCCcEEEE-EcChHHHHHHHHHHHhCC
Q 006905 533 YDLIHADSVFS-----LYKDRCETEDILLEMDRILRPEGGVIF-RDDVDELVKVKRIIDALK 588 (626)
Q Consensus 533 ~Dlih~~~~f~-----~~~~~c~~~~~l~E~dRiLRPgG~~i~-~d~~~~~~~~~~~~~~l~ 588 (626)
||.|.+...-. +...|...+.+|.++.|+|||||.|++ +|..+....+.+.+....
T Consensus 124 ~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~~ 185 (235)
T 3ckk_A 124 LTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEHP 185 (235)
T ss_dssp EEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTST
T ss_pred eeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHCC
Confidence 99987632111 122233346899999999999999998 476677777777666554
No 286
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.77 E-value=2.8e-08 Score=94.95 Aligned_cols=92 Identities=13% Similarity=0.081 Sum_probs=64.3
Q ss_pred CCEEEEeCCCCchHHHHHhhC-------------CcEEEeCCccchHHHHHHHHHHcCCCeEEE-EcccccCC-------
Q 006905 212 IRTAIDTGCGVASWGAYLLSR-------------NIITMSFAPRDTHEAQVQFALERGVPALIG-VLAAERLP------- 270 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~-------------~V~avdis~~dls~a~i~~A~erg~~~~~~-v~d~~~Lp------- 270 (626)
+.+|||+|||+|.++..|+++ .++++|+++... -..+.+. ..|....+
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----------~~~~~~~~~~d~~~~~~~~~~~~ 91 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----------LEGATFLCPADVTDPRTSQRILE 91 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----------CTTCEEECSCCTTSHHHHHHHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhccc-----------CCCCeEEEeccCCCHHHHHHHHH
Confidence 458999999999999998875 378888877320 1124455 55543332
Q ss_pred -CCCCCeeEEEeccccc---cccccH-------HHHHHHHHhcccCCeEEEEEeC
Q 006905 271 -YPSRAFDMAHCSRCLI---PWNQFG-------GIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 271 -f~d~sFDlV~~~~~l~---h~~~~~-------~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+++++||+|+|..+++ ++..+. ..++.++.++|||||.|++...
T Consensus 92 ~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 92 VLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp HSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 3456899999976542 222222 3789999999999999999854
No 287
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.77 E-value=1.4e-08 Score=105.55 Aligned_cols=104 Identities=13% Similarity=0.109 Sum_probs=70.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHH---H-cCCCeEEEEcccccCCC--CCCCeeEEE
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFAL---E-RGVPALIGVLAAERLPY--PSRAFDMAH 280 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~---e-rg~~~~~~v~d~~~Lpf--~d~sFDlV~ 280 (626)
.+.+|||||||+|.++..+++. .++++|+++..+..+...+.. . ....+.+...|...++. ++++||+|+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi 174 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVI 174 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEE
Confidence 4568999999999999999875 578888877544433322211 0 12346777777665543 478999999
Q ss_pred eccccccccccH---HHHHHHHHhcccCCeEEEEEeC
Q 006905 281 CSRCLIPWNQFG---GIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 281 ~~~~l~h~~~~~---~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+......++... ..+++++.|+|||||.|++...
T Consensus 175 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 175 IDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGE 211 (304)
T ss_dssp EECC---------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 976553222111 5889999999999999999754
No 288
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.76 E-value=1.4e-08 Score=103.75 Aligned_cols=95 Identities=15% Similarity=0.143 Sum_probs=68.1
Q ss_pred CCCEEEEeCCCCchHHHHHhhC-CcEEEeCCccchHHHHHHHHHHcC-------CCeEEE--EcccccCCCCCCCeeEEE
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR-NIITMSFAPRDTHEAQVQFALERG-------VPALIG--VLAAERLPYPSRAFDMAH 280 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~-~V~avdis~~dls~a~i~~A~erg-------~~~~~~--v~d~~~Lpf~d~sFDlV~ 280 (626)
++.+|||||||+|.++..++++ .|+++|+++ +... +.+.. ..+.+. ++|+..++ +++||+|+
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~~~~V~gvD~s~-m~~~-----a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~ 145 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAASRPHVMDVRAYT-LGVG-----GHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIM 145 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHTSTTEEEEEEEC-CCCS-----SCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEE
T ss_pred CCCEEEEeCcCCCHHHHHHHHcCcEEEEECch-hhhh-----hhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEE
Confidence 3568999999999999999886 799999988 3211 11111 135666 67777766 67999999
Q ss_pred eccccccccc---cHH---HHHHHHHhcccCCe--EEEEEeC
Q 006905 281 CSRCLIPWNQ---FGG---IYLIEVDRVLRPGG--YWILSGP 314 (626)
Q Consensus 281 ~~~~l~h~~~---~~~---~~L~Ei~RvLKPGG--~lvis~p 314 (626)
|..+ ++... +.. .+|.++.|+||||| .|++...
T Consensus 146 sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~ 186 (265)
T 2oxt_A 146 CDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVL 186 (265)
T ss_dssp ECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred EeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeC
Confidence 9766 22211 111 37899999999999 9999753
No 289
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.76 E-value=4.6e-08 Score=100.27 Aligned_cols=118 Identities=13% Similarity=0.063 Sum_probs=75.4
Q ss_pred HHHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC---CcEEEeC-CccchHHHHHHHH----HHcCC------Ce
Q 006905 194 ADAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR---NIITMSF-APRDTHEAQVQFA----LERGV------PA 259 (626)
Q Consensus 194 a~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~---~V~avdi-s~~dls~a~i~~A----~erg~------~~ 259 (626)
.....+.+.+..... .+.+|||||||+|.++..++.. .|+++|+ ++..+..+..+.. ...++ .+
T Consensus 64 ~~~l~~~l~~~~~~~--~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v 141 (281)
T 3bzb_A 64 ARALADTLCWQPELI--AGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASP 141 (281)
T ss_dssp HHHHHHHHHHCGGGT--TTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCC
T ss_pred HHHHHHHHHhcchhc--CCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCe
Confidence 444444454443322 3458999999999999988875 5788898 6755544433321 22222 23
Q ss_pred EEEEccccc----CC--CCCCCeeEEEeccccccccccHHHHHHHHHhccc---C--CeEEEEEeC
Q 006905 260 LIGVLAAER----LP--YPSRAFDMAHCSRCLIPWNQFGGIYLIEVDRVLR---P--GGYWILSGP 314 (626)
Q Consensus 260 ~~~v~d~~~----Lp--f~d~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLK---P--GG~lvis~p 314 (626)
.+...+... +. +++++||+|+++.+++| ..+...++.++.++|+ | ||.+++...
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~-~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~ 206 (281)
T 3bzb_A 142 KVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSF-HQAHDALLRSVKMLLALPANDPTAVALVTFT 206 (281)
T ss_dssp EEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSC-GGGHHHHHHHHHHHBCCTTTCTTCEEEEEEC
T ss_pred EEEEecCCCccHHHHhhccCCCCCEEEEeCcccC-hHHHHHHHHHHHHHhcccCCCCCCEEEEEEE
Confidence 444333221 11 03578999999998855 4446899999999999 9 999887643
No 290
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.76 E-value=3.3e-09 Score=119.62 Aligned_cols=101 Identities=16% Similarity=0.132 Sum_probs=75.5
Q ss_pred CCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcC-CCeEEEEcccccC--CCCCCCeeEEEecccc
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERG-VPALIGVLAAERL--PYPSRAFDMAHCSRCL 285 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg-~~~~~~v~d~~~L--pf~d~sFDlV~~~~~l 285 (626)
.+.+|||||||.|.++..|+++ .|+++|+++.++..+.. .|.+.+ .++.+.+.+++.+ ++.+++||+|+|..++
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ 144 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRA-LAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVF 144 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCH
T ss_pred CCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHH-HHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcch
Confidence 3568999999999999999998 56777776655544332 344455 5788888888877 4678899999999999
Q ss_pred ccccccH-HHHHHHHHhcccCCeEEEEE
Q 006905 286 IPWNQFG-GIYLIEVDRVLRPGGYWILS 312 (626)
Q Consensus 286 ~h~~~~~-~~~L~Ei~RvLKPGG~lvis 312 (626)
+|..+.. -..+..+.+.|+++|..++.
T Consensus 145 ehv~~~~~~~~~~~~~~tl~~~~~~~~~ 172 (569)
T 4azs_A 145 HHIVHLHGIDEVKRLLSRLADVTQAVIL 172 (569)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHSSEEEE
T ss_pred hcCCCHHHHHHHHHHHHHhccccceeeE
Confidence 9986532 24456677788888776664
No 291
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.76 E-value=1.1e-08 Score=105.28 Aligned_cols=95 Identities=17% Similarity=0.141 Sum_probs=68.7
Q ss_pred CCCEEEEeCCCCchHHHHHhhC-CcEEEeCCccchHHHHHHHHHHcC-------CCeEEE--EcccccCCCCCCCeeEEE
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR-NIITMSFAPRDTHEAQVQFALERG-------VPALIG--VLAAERLPYPSRAFDMAH 280 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~-~V~avdis~~dls~a~i~~A~erg-------~~~~~~--v~d~~~Lpf~d~sFDlV~ 280 (626)
++.+|||||||+|.++..++++ .|+++|+++ +... +.++. .++.+. ++|+..+| +++||+|+
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~~~V~gVD~s~-m~~~-----a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vv 153 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQPNVREVKAYT-LGTS-----GHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVL 153 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTSTTEEEEEEEC-CCCT-----TSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEE
T ss_pred CCCEEEEeccCCCHHHHHHHHcCCEEEEECch-hhhh-----hhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEE
Confidence 3568999999999999999886 799999988 4211 11111 145666 77877776 67999999
Q ss_pred ecccccccc----ccH--HHHHHHHHhcccCCe--EEEEEeC
Q 006905 281 CSRCLIPWN----QFG--GIYLIEVDRVLRPGG--YWILSGP 314 (626)
Q Consensus 281 ~~~~l~h~~----~~~--~~~L~Ei~RvLKPGG--~lvis~p 314 (626)
|..+ +... +.. ..+|.++.|+||||| .|++...
T Consensus 154 sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~ 194 (276)
T 2wa2_A 154 CDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVL 194 (276)
T ss_dssp ECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEES
T ss_pred ECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeC
Confidence 9876 2221 111 137899999999999 9998653
No 292
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.76 E-value=1.7e-08 Score=98.15 Aligned_cols=96 Identities=11% Similarity=0.094 Sum_probs=69.7
Q ss_pred CCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEccccc-CCCCCCCeeEEEecc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAER-LPYPSRAFDMAHCSR 283 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~-Lpf~d~sFDlV~~~~ 283 (626)
..+|||||||+|..+..|++. .++++|+++..+..+..... ..+. .+.+..+|... ++..++ ||+|++..
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLH-DNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC 134 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHH-HHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HCCCCceEEEEEecHHHHhccCCC-CCEEEEcC
Confidence 458999999999999999865 58888887755544333322 3343 36677777544 355456 99999864
Q ss_pred ccccccccHHHHHHHHHhcccCCeEEEEEe
Q 006905 284 CLIPWNQFGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 284 ~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
. ..+...++.++.++|||||++++..
T Consensus 135 ~----~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 135 D----VFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp T----TSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred C----hhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 2 2345789999999999999999864
No 293
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.75 E-value=1.7e-08 Score=107.25 Aligned_cols=96 Identities=14% Similarity=0.315 Sum_probs=75.0
Q ss_pred CceeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHHHh----cc---cceeccccccCC----CCCCccce
Q 006905 469 RYRNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIYER----GL---VGTYTNWCEAMS----TYPRTYDL 535 (626)
Q Consensus 469 ~~r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~~~~e~~~----~yp~t~Dl 535 (626)
..++|||+|||.|.++.+|++. ++ .++.+|. +.+++.+.++ |+ +.... ..+. ++|.+||+
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~~~~~p~~~D~ 251 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEV---EVTIVDL-PQQLEMMRKQTAGLSGSERIHGHG---ANLLDRDVPFPTGFDA 251 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTC---EEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEE---CCCCSSSCCCCCCCSE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCC---EEEEEeC-HHHHHHHHHHHHhcCcccceEEEE---ccccccCCCCCCCcCE
Confidence 4678999999999999999873 44 6788888 5899988876 33 33332 2222 36789999
Q ss_pred eeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 536 IHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 536 ih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
|++..++.++.+. +...+|.++.|+|||||.++|.|
T Consensus 252 v~~~~vlh~~~~~-~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 252 VWMSQFLDCFSEE-EVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp EEEESCSTTSCHH-HHHHHHHHHHHHCCTTCEEEEEE
T ss_pred EEEechhhhCCHH-HHHHHHHHHHHhcCCCcEEEEEe
Confidence 9999999887643 44578999999999999999975
No 294
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.75 E-value=2.7e-08 Score=94.17 Aligned_cols=127 Identities=13% Similarity=0.149 Sum_probs=92.2
Q ss_pred eEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcccceeccccccCCCCC-CccceeeeccccccCCCC--
Q 006905 472 NILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGLVGTYTNWCEAMSTYP-RTYDLIHADSVFSLYKDR-- 548 (626)
Q Consensus 472 ~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgli~~~~~~~e~~~~yp-~t~Dlih~~~~f~~~~~~-- 548 (626)
+|||+|||+|.++.+|++.+ +|+.+|.++.+++. ... +.+++. ..+..++ .+||+|.++..|....+.
T Consensus 26 ~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~--~~~-~~~~~~--d~~~~~~~~~fD~i~~n~~~~~~~~~~~ 96 (170)
T 3q87_B 26 IVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES--HRG-GNLVRA--DLLCSINQESVDVVVFNPPYVPDTDDPI 96 (170)
T ss_dssp EEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT--CSS-SCEEEC--STTTTBCGGGCSEEEECCCCBTTCCCTT
T ss_pred eEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc--ccC-CeEEEC--ChhhhcccCCCCEEEECCCCccCCcccc
Confidence 89999999999999999987 89999999888887 222 333331 1222345 899999998877753322
Q ss_pred ----CCHHHHHHHhhhhccCCcEEEEEcC-hHHHHHHHHHHHhCCCeeEEeecCCCCCCcceEEEEE
Q 006905 549 ----CETEDILLEMDRILRPEGGVIFRDD-VDELVKVKRIIDALKWQSQIVDHEDGPLEREKLLFAV 610 (626)
Q Consensus 549 ----c~~~~~l~E~dRiLRPgG~~i~~d~-~~~~~~~~~~~~~l~w~~~~~~~e~~~~~~e~~l~~~ 610 (626)
.+...++.++-|.| |||.+++... ......+.++++...|+.......... .|++++.+
T Consensus 97 ~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~~~~~~~--~e~~~~~~ 160 (170)
T 3q87_B 97 IGGGYLGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGTRILKVRKIL--GETVYIIK 160 (170)
T ss_dssp TBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEEEEEECS--SSEEEEEE
T ss_pred ccCCcchHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEEEeeccC--CceEEEEE
Confidence 12346888898888 9999999764 356788889999999988755444333 35555553
No 295
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.75 E-value=2.3e-08 Score=97.94 Aligned_cols=98 Identities=15% Similarity=0.110 Sum_probs=69.8
Q ss_pred CCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEccccc-CC-CC---CCCeeEE
Q 006905 212 IRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAER-LP-YP---SRAFDMA 279 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~-Lp-f~---d~sFDlV 279 (626)
+.+|||||||+|.++..|++. .++++|+++..+..+... ....+. .+.+..+|... ++ ++ .++||+|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v 137 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSN-IERANLNDRVEVRTGLALDSLQQIENEKYEPFDFI 137 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHH-HHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEE
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEE
Confidence 458999999999999999886 578888877555443333 333454 36777777543 22 11 2679999
Q ss_pred EeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 280 HCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 280 ~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
++.... .....++.++.++|||||++++...
T Consensus 138 ~~d~~~----~~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 138 FIDADK----QNNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp EECSCG----GGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred EEcCCc----HHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 986642 2346899999999999999988754
No 296
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.75 E-value=4.2e-08 Score=97.25 Aligned_cols=106 Identities=19% Similarity=0.107 Sum_probs=74.2
Q ss_pred HHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccccCCCCCCC
Q 006905 200 DIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAERLPYPSRA 275 (626)
Q Consensus 200 ~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~Lpf~d~s 275 (626)
.+...+.... +.+|||+|||+|.++..+++. .++++|+++..+..+... ....++ .+.+...|.....+++++
T Consensus 82 ~~~~~~~~~~--~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~ 158 (248)
T 2yvl_A 82 YIALKLNLNK--EKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKN-LKKFNLGKNVKFFNVDFKDAEVPEGI 158 (248)
T ss_dssp HHHHHTTCCT--TCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHH-HHHTTCCTTEEEECSCTTTSCCCTTC
T ss_pred HHHHhcCCCC--CCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHH-HHHcCCCCcEEEEEcChhhcccCCCc
Confidence 4444544333 458999999999999998874 678888877544433322 223343 466666676554435678
Q ss_pred eeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 276 FDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 276 FDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
||+|++.. .++..++.++.++|||||.+++..+
T Consensus 159 ~D~v~~~~------~~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 159 FHAAFVDV------REPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp BSEEEECS------SCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred ccEEEECC------cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 99999843 1346789999999999999999865
No 297
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.75 E-value=1.8e-08 Score=99.54 Aligned_cols=108 Identities=14% Similarity=0.154 Sum_probs=75.0
Q ss_pred HHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccccC-CC
Q 006905 199 DDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAERL-PY 271 (626)
Q Consensus 199 ~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~L-pf 271 (626)
..+..++...+ +.+|||+|||+|.++..|++. .++++|+++..+..+.. .....+. .+.+..+|.... +.
T Consensus 44 ~~l~~~~~~~~--~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~~~~ 120 (233)
T 2gpy_A 44 ESLLHLLKMAA--PARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHK-HVKALGLESRIELLFGDALQLGEK 120 (233)
T ss_dssp HHHHHHHHHHC--CSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHH-HHHHTTCTTTEEEECSCGGGSHHH
T ss_pred HHHHHHHhccC--CCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCcEEEEECCHHHHHHh
Confidence 34444444333 458999999999999988875 57888887754443332 2223344 366777775553 43
Q ss_pred C--CCCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEe
Q 006905 272 P--SRAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 272 ~--d~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
. +++||+|++.... .+...++.++.++|||||.+++..
T Consensus 121 ~~~~~~fD~I~~~~~~----~~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 121 LELYPLFDVLFIDAAK----GQYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp HTTSCCEEEEEEEGGG----SCHHHHHHHHGGGEEEEEEEEEET
T ss_pred cccCCCccEEEECCCH----HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 3 5789999997654 245789999999999999999973
No 298
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.75 E-value=2.6e-08 Score=105.25 Aligned_cols=102 Identities=13% Similarity=0.083 Sum_probs=72.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHH----cCCCeEEEEcccccC-C-CCCCCeeEEE
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALE----RGVPALIGVLAAERL-P-YPSRAFDMAH 280 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~e----rg~~~~~~v~d~~~L-p-f~d~sFDlV~ 280 (626)
...+|||||||+|.++..|+++ .++++|+++..+..+...+... ....+.+..+|.... + +++++||+|+
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi 199 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVI 199 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEE
Confidence 3569999999999999999876 5888888775554443332221 123567777775443 2 3467899999
Q ss_pred ecccccccc--cc--HHHHHHHHHhcccCCeEEEEEe
Q 006905 281 CSRCLIPWN--QF--GGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 281 ~~~~l~h~~--~~--~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
+.... ++. .. ...++.++.|+|+|||.|++..
T Consensus 200 ~d~~~-p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 200 VDSSD-PIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp ECCCC-TTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred ECCCC-ccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 96542 222 11 2689999999999999999974
No 299
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.74 E-value=1.7e-08 Score=108.13 Aligned_cols=99 Identities=19% Similarity=0.176 Sum_probs=75.5
Q ss_pred CceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc---cceeccccccCCCCCCccceeeeccc
Q 006905 469 RYRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL---VGTYTNWCEAMSTYPRTYDLIHADSV 541 (626)
Q Consensus 469 ~~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~~~~e~~~~yp~t~Dlih~~~~ 541 (626)
.-.+|||+|||+|.++..|++.+. -+|+.+|.+ +++..+.++ |+ |.+++.-.+.+. +|..||+|++..+
T Consensus 63 ~~~~VLDlGcGtG~ls~~la~~g~--~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~Iv~~~~ 138 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWSAQAGA--RKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDIS-LPEKVDVIISEWM 138 (376)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTC--SEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCC-CSSCEEEEEECCC
T ss_pred CCCEEEEeccCcCHHHHHHHhcCC--CEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcC-cCCcceEEEEcCh
Confidence 356899999999999999998864 278999999 999887665 33 344442222222 4589999999776
Q ss_pred cccCCCCCCHHHHHHHhhhhccCCcEEEEE
Q 006905 542 FSLYKDRCETEDILLEMDRILRPEGGVIFR 571 (626)
Q Consensus 542 f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~ 571 (626)
.......-.++.++.+++|+|||||.+|+.
T Consensus 139 ~~~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 139 GYFLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp BTTBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred hhcccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 555554456788999999999999999885
No 300
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.74 E-value=2.6e-08 Score=100.50 Aligned_cols=112 Identities=13% Similarity=0.145 Sum_probs=76.4
Q ss_pred HHHHHHhhhhcCCCCCceeEEeccCchhhHhhhhhCC-C--eEEEEeccCccCcc------cHHHHHHh----cc---cc
Q 006905 454 LSYYKTMNNQLGQSGRYRNILDMNAHLGGFAAALIDF-P--VWVMNVVPAEAKIN------TLGVIYER----GL---VG 517 (626)
Q Consensus 454 v~~y~~~~~~~~~~~~~r~vlD~g~g~G~faa~l~~~-~--v~~mnv~~~~~~~~------~l~~~~~r----gl---i~ 517 (626)
...+..++..+.. ..-.+|||+|||.|.++..|++. + . +|+.+|.++. +++.+.++ |+ +.
T Consensus 29 ~~~~~~l~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~g~~~---~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~ 104 (275)
T 3bkx_A 29 TAHRLAIAEAWQV-KPGEKILEIGCGQGDLSAVLADQVGSSG---HVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLT 104 (275)
T ss_dssp HHHHHHHHHHHTC-CTTCEEEEESCTTSHHHHHHHHHHCTTC---EEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEE
T ss_pred HHHHHHHHHHcCC-CCCCEEEEeCCCCCHHHHHHHHHhCCCC---EEEEEECCccccccHHHHHHHHHHHHhcCCCCceE
Confidence 3344444444433 33568999999999999999876 2 4 7888888866 88887766 22 33
Q ss_pred eec-c-ccccCCCCC-CccceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 518 TYT-N-WCEAMSTYP-RTYDLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 518 ~~~-~-~~e~~~~yp-~t~Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
+.+ | ....-.+++ .+||+|++..++.+..+ .+.++..+.++++|||++++.+
T Consensus 105 ~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~---~~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 105 VHFNTNLSDDLGPIADQHFDRVVLAHSLWYFAS---ANALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp EECSCCTTTCCGGGTTCCCSEEEEESCGGGSSC---HHHHHHHHHHHTTTCSEEEEEE
T ss_pred EEECChhhhccCCCCCCCEEEEEEccchhhCCC---HHHHHHHHHHHhCCCCEEEEEE
Confidence 333 1 111112344 89999999999988775 3556666677777799999974
No 301
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.74 E-value=2.1e-08 Score=99.61 Aligned_cols=130 Identities=16% Similarity=0.240 Sum_probs=87.6
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc---cceec-cccccCC-CCCCccceeeecc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL---VGTYT-NWCEAMS-TYPRTYDLIHADS 540 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~-~~~e~~~-~yp~t~Dlih~~~ 540 (626)
-.+|||+|||.|.++.+|++.. -..+|+.+|.++.++..+.++ |+ +.+++ |..+.+. ..+.+||+|.++.
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~ 150 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASIS-DDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDA 150 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTC-TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEET
T ss_pred CCEEEEEeCchhHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcC
Confidence 4589999999999999999831 023789999998999988765 33 33444 3333333 3358999999753
Q ss_pred ccccCCCCCCHHHHHHHhhhhccCCcEEEEEcC-----------------hHHHHHHHHHHH----hCCCeeEEeecCCC
Q 006905 541 VFSLYKDRCETEDILLEMDRILRPEGGVIFRDD-----------------VDELVKVKRIID----ALKWQSQIVDHEDG 599 (626)
Q Consensus 541 ~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~-----------------~~~~~~~~~~~~----~l~w~~~~~~~e~~ 599 (626)
. .-.+..++.++.|+|||||.+++.+. ......++++.+ .-++...+...
T Consensus 151 ~------~~~~~~~l~~~~~~LkpgG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~--- 221 (232)
T 3ntv_A 151 A------KAQSKKFFEIYTPLLKHQGLVITDNVLYHGFVSDIGIVRSRNVRQMVKKVQDYNEWLIKQPGYTTNFLNI--- 221 (232)
T ss_dssp T------SSSHHHHHHHHGGGEEEEEEEEEECTTGGGGGGCGGGGGCHHHHHHHHHHHHHHHHHHTCTTEEEEEECS---
T ss_pred c------HHHHHHHHHHHHHhcCCCeEEEEeeCCcCccccCcccccchhhhHHHHHHHHHHHHHhcCCCeEEEEEEc---
Confidence 2 33567899999999999999999321 112334444433 34566655532
Q ss_pred CCCcceEEEEEec
Q 006905 600 PLEREKLLFAVKL 612 (626)
Q Consensus 600 ~~~~e~~l~~~K~ 612 (626)
.+.+.+++|+
T Consensus 222 ---~dG~~i~~k~ 231 (232)
T 3ntv_A 222 ---DDGLAISIKG 231 (232)
T ss_dssp ---TTCEEEEEEC
T ss_pred ---CCceEEEEEC
Confidence 3668888874
No 302
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.74 E-value=4e-08 Score=103.02 Aligned_cols=108 Identities=15% Similarity=0.100 Sum_probs=71.8
Q ss_pred HHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHc-----------CCCeEEE
Q 006905 199 DDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALER-----------GVPALIG 262 (626)
Q Consensus 199 ~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~er-----------g~~~~~~ 262 (626)
..+...+...+ +.+|||+|||+|.++..|++. .++++|+++..+..+..+..... ...+.+.
T Consensus 95 ~~~l~~l~~~~--g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~ 172 (336)
T 2b25_A 95 NMILSMMDINP--GDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFI 172 (336)
T ss_dssp HHHHHHHTCCT--TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEE
T ss_pred HHHHHhcCCCC--CCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEE
Confidence 34455554443 459999999999999988874 48888887765554444333211 1346777
Q ss_pred EcccccC--CCCCCCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 263 VLAAERL--PYPSRAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 263 v~d~~~L--pf~d~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
.+|...+ ++++++||+|++.... +..++.++.++|||||.|++..+
T Consensus 173 ~~d~~~~~~~~~~~~fD~V~~~~~~------~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 173 HKDISGATEDIKSLTFDAVALDMLN------PHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp ESCTTCCC-------EEEEEECSSS------TTTTHHHHGGGEEEEEEEEEEES
T ss_pred ECChHHcccccCCCCeeEEEECCCC------HHHHHHHHHHhcCCCcEEEEEeC
Confidence 7887665 5667789999985422 23478999999999999998754
No 303
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.73 E-value=5.9e-09 Score=102.88 Aligned_cols=110 Identities=13% Similarity=0.167 Sum_probs=81.6
Q ss_pred eeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc-cceec-cccccCCCC-CCccceeeeccccccCCC
Q 006905 471 RNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL-VGTYT-NWCEAMSTY-PRTYDLIHADSVFSLYKD 547 (626)
Q Consensus 471 r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl-i~~~~-~~~e~~~~y-p~t~Dlih~~~~f~~~~~ 547 (626)
.+|||+|||.|.++..|++.+. +|+.+|.++.+++.+.++.- +.+++ |+.+.++.- +.+||+|.+.
T Consensus 50 ~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~-------- 118 (226)
T 3m33_A 50 TRVLEAGCGHGPDAARFGPQAA---RWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR-------- 118 (226)
T ss_dssp CEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE--------
T ss_pred CeEEEeCCCCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC--------
Confidence 5799999999999999999875 89999999999999999832 23333 343333322 3799999985
Q ss_pred CCCHHHHHHHhhhhccCCcEEEEEcChHHHHHHHHHHHhCCCeeE
Q 006905 548 RCETEDILLEMDRILRPEGGVIFRDDVDELVKVKRIIDALKWQSQ 592 (626)
Q Consensus 548 ~c~~~~~l~E~dRiLRPgG~~i~~d~~~~~~~~~~~~~~l~w~~~ 592 (626)
-+...+|.++.|+|||||.++..........+.+.+....+...
T Consensus 119 -~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~~ 162 (226)
T 3m33_A 119 -RGPTSVILRLPELAAPDAHFLYVGPRLNVPEVPERLAAVGWDIV 162 (226)
T ss_dssp -SCCSGGGGGHHHHEEEEEEEEEEESSSCCTHHHHHHHHTTCEEE
T ss_pred -CCHHHHHHHHHHHcCCCcEEEEeCCcCCHHHHHHHHHHCCCeEE
Confidence 24578899999999999999954333334456666666666554
No 304
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.73 E-value=3.3e-08 Score=95.79 Aligned_cols=91 Identities=16% Similarity=0.076 Sum_probs=65.7
Q ss_pred CCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCC-----------CCCeeE
Q 006905 212 IRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYP-----------SRAFDM 278 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~-----------d~sFDl 278 (626)
+.+|||+|||+|.++..++++ .|+++|+++... ...+.+.++|....+.. .++||+
T Consensus 26 g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~~-----------~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~ 94 (191)
T 3dou_A 26 GDAVIEIGSSPGGWTQVLNSLARKIISIDLQEMEE-----------IAGVRFIRCDIFKETIFDDIDRALREEGIEKVDD 94 (191)
T ss_dssp TCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCCC-----------CTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEE
T ss_pred CCEEEEEeecCCHHHHHHHHcCCcEEEEecccccc-----------CCCeEEEEccccCHHHHHHHHHHhhcccCCcceE
Confidence 569999999999999999986 588999987421 12466777786665421 148999
Q ss_pred EEecccccc---cccc-------HHHHHHHHHhcccCCeEEEEEe
Q 006905 279 AHCSRCLIP---WNQF-------GGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 279 V~~~~~l~h---~~~~-------~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
|+|...... +..+ ...++.++.++|||||.|++..
T Consensus 95 Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~ 139 (191)
T 3dou_A 95 VVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQ 139 (191)
T ss_dssp EEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 999654311 1111 1467889999999999999875
No 305
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.73 E-value=5.1e-09 Score=106.47 Aligned_cols=102 Identities=15% Similarity=0.072 Sum_probs=76.6
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhc----c---cceeccccccCCCC--CCccceeeecc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERG----L---VGTYTNWCEAMSTY--PRTYDLIHADS 540 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rg----l---i~~~~~~~e~~~~y--p~t~Dlih~~~ 540 (626)
-.+|||+|||.|.++..|++.+. .+|+.+|.++.++..+.++. + +.+.+.-.+.+ .+ +.+||+|.+..
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 65 GDSVLDLGCGKGGDLLKYERAGI--GEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGR-HMDLGKEFDVISSQF 141 (298)
T ss_dssp TCEEEEETCTTTTTHHHHHHHTC--SEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTS-CCCCSSCEEEEEEES
T ss_pred CCeEEEECCCCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCcccc-ccCCCCCcCEEEECc
Confidence 45899999999999999987753 27899999999999888773 2 23333212222 23 38999999998
Q ss_pred ccccC-CCCCCHHHHHHHhhhhccCCcEEEEEcCh
Q 006905 541 VFSLY-KDRCETEDILLEMDRILRPEGGVIFRDDV 574 (626)
Q Consensus 541 ~f~~~-~~~c~~~~~l~E~dRiLRPgG~~i~~d~~ 574 (626)
++.+. .+.-+...+|.++.|+|||||++++....
T Consensus 142 ~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 142 SFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp CGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 88652 33335678999999999999999998654
No 306
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.73 E-value=7.2e-09 Score=102.63 Aligned_cols=115 Identities=12% Similarity=0.089 Sum_probs=79.2
Q ss_pred ceeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHHHh----cc--cceec-cccccCCC-CC-Cccceeee
Q 006905 470 YRNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIYER----GL--VGTYT-NWCEAMST-YP-RTYDLIHA 538 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~r----gl--i~~~~-~~~e~~~~-yp-~t~Dlih~ 538 (626)
-..|||+|||.|.++..|++. +. +|+++|.++.++..+.++ |+ +.+++ |-.+-+.. +| .+||.|++
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~~---~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~ 111 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPEQ---DFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQL 111 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTS---EEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEE
T ss_pred CCeEEEEeeeChHHHHHHHHHCCCC---eEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEE
Confidence 457999999999999999865 33 789999999999887665 44 23333 22221221 45 99999998
Q ss_pred ccccccCCC-----CCCHHHHHHHhhhhccCCcEEEEE-cChHHHHHHHHHHHhC
Q 006905 539 DSVFSLYKD-----RCETEDILLEMDRILRPEGGVIFR-DDVDELVKVKRIIDAL 587 (626)
Q Consensus 539 ~~~f~~~~~-----~c~~~~~l~E~dRiLRPgG~~i~~-d~~~~~~~~~~~~~~l 587 (626)
......... |-..+.+|.++.|+|||||.+++. |.......+.+++...
T Consensus 112 ~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~~ 166 (218)
T 3dxy_A 112 FFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSI 166 (218)
T ss_dssp ESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTS
T ss_pred eCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHhC
Confidence 533222222 122246999999999999999985 5566666677666543
No 307
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.72 E-value=3.6e-08 Score=102.95 Aligned_cols=133 Identities=14% Similarity=0.145 Sum_probs=94.6
Q ss_pred CCceeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHHHh----cc---cceeccccccCCCCCCccceeee
Q 006905 468 GRYRNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIYER----GL---VGTYTNWCEAMSTYPRTYDLIHA 538 (626)
Q Consensus 468 ~~~r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~~~~e~~~~yp~t~Dlih~ 538 (626)
....+|||+|||.|.++..|++. ++ .++.+|. +.+++.+.++ |+ +..... ..+..+|..||+|.+
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~--d~~~~~p~~~D~v~~ 241 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAHEDL---SGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVG--SFFDPLPAGAGGYVL 241 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHCTTC---EEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEEC--CTTSCCCCSCSEEEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHCCCC---eEEEecC-HHHHHHHHHhhhhcCcCcCeEEecC--CCCCCCCCCCcEEEE
Confidence 56789999999999999999863 33 5666788 6888887765 44 333321 122456779999999
Q ss_pred ccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh----------H------------HHHHHHHHHHhCCCeeEEeec
Q 006905 539 DSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV----------D------------ELVKVKRIIDALKWQSQIVDH 596 (626)
Q Consensus 539 ~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~----------~------------~~~~~~~~~~~l~w~~~~~~~ 596 (626)
..++.++.+. ....+|.++.|+|||||+++|.|.. + ....++++++.-.++..-+..
T Consensus 242 ~~vlh~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 320 (332)
T 3i53_A 242 SAVLHDWDDL-SAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAHP 320 (332)
T ss_dssp ESCGGGSCHH-HHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred ehhhccCCHH-HHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEEE
Confidence 9999988752 3578999999999999999997642 0 144566777777777653332
Q ss_pred CCCCCCcceEEEEEe
Q 006905 597 EDGPLEREKLLFAVK 611 (626)
Q Consensus 597 e~~~~~~e~~l~~~K 611 (626)
-. + ..|+.++|
T Consensus 321 ~~-~---~~vie~r~ 331 (332)
T 3i53_A 321 IS-Y---VSIVEMTA 331 (332)
T ss_dssp CS-S---SEEEEEEE
T ss_pred CC-C---cEEEEEee
Confidence 21 1 56777775
No 308
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.71 E-value=1.5e-07 Score=90.55 Aligned_cols=91 Identities=10% Similarity=-0.005 Sum_probs=64.3
Q ss_pred CCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCCCeeEEEecccccc
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSRAFDMAHCSRCLIP 287 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h 287 (626)
.+.+|||+|||+|.++..++.. .++++|+++ .+++.++++...+.+..+|...+| ++||+|+++..+++
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~-----~~~~~a~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~ 122 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLGAESVTAFDIDP-----DAIETAKRNCGGVNFMVADVSEIS---GKYDTWIMNPPFGS 122 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCH-----HHHHHHHHHCTTSEEEECCGGGCC---CCEEEEEECCCC--
T ss_pred CCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCH-----HHHHHHHHhcCCCEEEECcHHHCC---CCeeEEEECCCchh
Confidence 4568999999999999999886 377887765 455555554335677788877765 68999999998876
Q ss_pred ccccH-HHHHHHHHhcccCCeEEEEE
Q 006905 288 WNQFG-GIYLIEVDRVLRPGGYWILS 312 (626)
Q Consensus 288 ~~~~~-~~~L~Ei~RvLKPGG~lvis 312 (626)
+.... ..++.++.++| |+ +++.
T Consensus 123 ~~~~~~~~~l~~~~~~~--g~-~~~~ 145 (200)
T 1ne2_A 123 VVKHSDRAFIDKAFETS--MW-IYSI 145 (200)
T ss_dssp -----CHHHHHHHHHHE--EE-EEEE
T ss_pred ccCchhHHHHHHHHHhc--Cc-EEEE
Confidence 65422 57899999998 44 4444
No 309
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.71 E-value=3.4e-08 Score=100.95 Aligned_cols=96 Identities=9% Similarity=-0.021 Sum_probs=74.2
Q ss_pred CCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCC-CeEEEEcccccCCCCCCCeeEEEeccccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGV-PALIGVLAAERLPYPSRAFDMAHCSRCLI 286 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~-~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~ 286 (626)
+.+|||+|||+|.++..++++ .|+++|+++..+..+.. .+..+++ ++.+..+|+..++. .++||+|++....
T Consensus 120 ~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~-n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p~- 196 (272)
T 3a27_A 120 NEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCE-NIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYVH- 196 (272)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHH-HHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCCS-
T ss_pred CCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHH-HHHHcCCCCEEEEECChHHcCc-cCCceEEEECCcc-
Confidence 458999999999999999875 58999998865554433 3444554 46677788777644 6789999997754
Q ss_pred cccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 287 PWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 287 h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
....++.++.++|+|||.++++..
T Consensus 197 ----~~~~~l~~~~~~LkpgG~l~~s~~ 220 (272)
T 3a27_A 197 ----KTHKFLDKTFEFLKDRGVIHYHET 220 (272)
T ss_dssp ----SGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred ----cHHHHHHHHHHHcCCCCEEEEEEc
Confidence 346789999999999999999854
No 310
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.71 E-value=5.4e-08 Score=97.78 Aligned_cols=133 Identities=17% Similarity=0.130 Sum_probs=90.4
Q ss_pred ceeEEeccCchhhHhhhhhCC---CeEEEEeccCccCcccHHHHHHh----cc---cceec-cccccCCCCC--Ccccee
Q 006905 470 YRNILDMNAHLGGFAAALIDF---PVWVMNVVPAEAKINTLGVIYER----GL---VGTYT-NWCEAMSTYP--RTYDLI 536 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~---~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~-~~~e~~~~yp--~t~Dli 536 (626)
-++|||+|||.|.++.+|++. +. .|+.+|.++.+++.+.++ |+ +.+.. |..+.+...+ .+||+|
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADG---QLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTC---EEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 468999999999999999886 44 789999998999988776 54 23333 3333333344 499999
Q ss_pred eeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh------------HHHHHHHHH----HHhCCCeeEEeecCCCC
Q 006905 537 HADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV------------DELVKVKRI----IDALKWQSQIVDHEDGP 600 (626)
Q Consensus 537 h~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~------------~~~~~~~~~----~~~l~w~~~~~~~e~~~ 600 (626)
.++.. .-+...+|.++.|+|||||++++.+.. .....++++ ...-+|...+...- |.
T Consensus 141 ~~d~~------~~~~~~~l~~~~~~LkpGG~lv~~~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~-g~ 213 (248)
T 3tfw_A 141 FIDAD------KPNNPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTATALQTV-GT 213 (248)
T ss_dssp EECSC------GGGHHHHHHHHHHTCCTTCEEEEECCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEEC-ST
T ss_pred EECCc------hHHHHHHHHHHHHhcCCCeEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCEEEEEeecC-CC
Confidence 98542 224567999999999999999986432 122334443 34446666554211 21
Q ss_pred CCcceEEEEEec
Q 006905 601 LEREKLLFAVKL 612 (626)
Q Consensus 601 ~~~e~~l~~~K~ 612 (626)
...+.+.+++|+
T Consensus 214 ~~~DG~~i~~~~ 225 (248)
T 3tfw_A 214 KGWDGFTLAWVN 225 (248)
T ss_dssp TCSEEEEEEEEC
T ss_pred CCCCeeEEEEEe
Confidence 235789999986
No 311
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.70 E-value=1.1e-08 Score=107.19 Aligned_cols=113 Identities=15% Similarity=0.148 Sum_probs=75.6
Q ss_pred HHHHHHHHhhcc----C-CCCCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHc-----CCCeEE
Q 006905 196 AYIDDIGKLINL----N-DGSIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALER-----GVPALI 261 (626)
Q Consensus 196 ~yi~~L~~ll~l----~-~~~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~er-----g~~~~~ 261 (626)
.|.+.|...+.. . .....+|||||||+|.++.+++++ .++++|+++ .+++.|+++ ...+.+
T Consensus 69 ~Y~e~m~~~~~~l~~~~p~p~~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp-----~vi~~Ar~~~~~~~~~rv~v 143 (317)
T 3gjy_A 69 EYMRWIATGARAFIDAHQDASKLRITHLGGGACTMARYFADVYPQSRNTVVELDA-----ELARLSREWFDIPRAPRVKI 143 (317)
T ss_dssp HHHHHHHHHHHHHHHHHSCGGGCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCH-----HHHHHHHHHSCCCCTTTEEE
T ss_pred HHHHHHHHHHHhhcccCCCCCCCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCH-----HHHHHHHHhccccCCCceEE
Confidence 455555544432 2 222348999999999999999883 467777765 455555543 234677
Q ss_pred EEcccccC--CCCCCCeeEEEeccccccccc-c--HHHHHHHHHhcccCCeEEEEEe
Q 006905 262 GVLAAERL--PYPSRAFDMAHCSRCLIPWNQ-F--GGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 262 ~v~d~~~L--pf~d~sFDlV~~~~~l~h~~~-~--~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
.+.|...+ .+++++||+|++......... . ...+++++.|+|||||.|++..
T Consensus 144 ~~~Da~~~l~~~~~~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 144 RVDDARMVAESFTPASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp EESCHHHHHHTCCTTCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECcHHHHHhhccCCCCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 77775543 345689999998643321111 1 1689999999999999999864
No 312
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.70 E-value=1.3e-08 Score=102.39 Aligned_cols=97 Identities=12% Similarity=0.010 Sum_probs=72.6
Q ss_pred CCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccccC-CCC-----CCCeeE
Q 006905 212 IRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAERL-PYP-----SRAFDM 278 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~L-pf~-----d~sFDl 278 (626)
..+|||||||+|..+..|++. .|+++|+++..+..+... ....++ .+.+..+|+... +.. +++||+
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~-~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~ 139 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPY-WREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDF 139 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHH-HHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeE
Confidence 458999999999999999873 689999999776654433 334454 477777775443 321 478999
Q ss_pred EEeccccccccccHHHHHHHHHhcccCCeEEEEEe
Q 006905 279 AHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 279 V~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
|++... ......++.++.++|||||++++..
T Consensus 140 V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~ 170 (242)
T 3r3h_A 140 IFIDAD----KTNYLNYYELALKLVTPKGLIAIDN 170 (242)
T ss_dssp EEEESC----GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEcCC----hHHhHHHHHHHHHhcCCCeEEEEEC
Confidence 998653 3334678999999999999999974
No 313
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.70 E-value=1.1e-08 Score=104.95 Aligned_cols=118 Identities=12% Similarity=0.014 Sum_probs=73.3
Q ss_pred HHHHHHHHhhccCCCCCCEEEEeCCCC--chHHHHHhh-----CCcEEEeCCccchHHHHHHHHHHcCCCeEEEEccccc
Q 006905 196 AYIDDIGKLINLNDGSIRTAIDTGCGV--ASWGAYLLS-----RNIITMSFAPRDTHEAQVQFALERGVPALIGVLAAER 268 (626)
Q Consensus 196 ~yi~~L~~ll~l~~~~~~~VLDIGCGt--G~~a~~La~-----~~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~ 268 (626)
.|+.+..+.+.... ..+.|||||||+ +.....+++ ..|+++|.++.++..++..+.......+.+..+|...
T Consensus 64 ~fl~rav~~l~~~~-g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~ 142 (277)
T 3giw_A 64 DWMNRAVAHLAKEA-GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLD 142 (277)
T ss_dssp HHHHHHHHHHHHTS-CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTC
T ss_pred HHHHHHHHHhcccc-CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccC
Confidence 34444555554222 256899999997 323333332 3688888888666544332221101136778888766
Q ss_pred CC----CC--CCCee-----EEEecccccccccc--HHHHHHHHHhcccCCeEEEEEeC
Q 006905 269 LP----YP--SRAFD-----MAHCSRCLIPWNQF--GGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 269 Lp----f~--d~sFD-----lV~~~~~l~h~~~~--~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
++ .+ .++|| .|+++.+|||..+. +..++.++.++|+|||+|+++..
T Consensus 143 ~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~ 201 (277)
T 3giw_A 143 PASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIG 201 (277)
T ss_dssp HHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEE
T ss_pred hhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEec
Confidence 42 11 34565 57788888555443 36899999999999999999853
No 314
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.70 E-value=4.3e-08 Score=102.45 Aligned_cols=110 Identities=15% Similarity=0.074 Sum_probs=75.4
Q ss_pred HHhhccCCCCCCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcCC-CeEEEEcccccCCCCCCC
Q 006905 202 GKLINLNDGSIRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERGV-PALIGVLAAERLPYPSRA 275 (626)
Q Consensus 202 ~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg~-~~~~~v~d~~~Lpf~d~s 275 (626)
..++...+ +.+|||+|||+|..+..|++. .++++|+++..+..+.. .+...++ .+.+...|...++..+++
T Consensus 111 ~~~l~~~~--g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~-~~~~~g~~~v~~~~~D~~~~~~~~~~ 187 (315)
T 1ixk_A 111 PVALDPKP--GEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRL-NLSRLGVLNVILFHSSSLHIGELNVE 187 (315)
T ss_dssp HHHHCCCT--TCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHH-HHHHHTCCSEEEESSCGGGGGGGCCC
T ss_pred HHHhCCCC--CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHH-HHHHhCCCeEEEEECChhhccccccc
Confidence 34444333 458999999999999998863 48899998765544333 3334455 467777787776655678
Q ss_pred eeEEEeccc------ccccc-------c--------cHHHHHHHHHhcccCCeEEEEEeC
Q 006905 276 FDMAHCSRC------LIPWN-------Q--------FGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 276 FDlV~~~~~------l~h~~-------~--------~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
||+|++... +.+.+ . ....+|.++.++|||||++++++.
T Consensus 188 fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stc 247 (315)
T 1ixk_A 188 FDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTC 247 (315)
T ss_dssp EEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred CCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 999998421 21111 0 014789999999999999999864
No 315
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.70 E-value=4.2e-08 Score=100.48 Aligned_cols=115 Identities=14% Similarity=0.181 Sum_probs=86.3
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cccceeccccccCCCC--CCccceeeeccccc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GLVGTYTNWCEAMSTY--PRTYDLIHADSVFS 543 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gli~~~~~~~e~~~~y--p~t~Dlih~~~~f~ 543 (626)
-.+|||+|||+|+|+..+++.+.- .|+.+|.++.+++.+.++ |+-..+.-.+.....+ +.+||+|.++..+
T Consensus 126 ~~~VLDlgcG~G~~~~~la~~~~~--~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p~- 202 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYVV- 202 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCCS-
T ss_pred CCEEEEecccCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCch-
Confidence 357999999999999999987642 689999999999988765 4422111123333444 4899999885432
Q ss_pred cCCCCCCHHHHHHHhhhhccCCcEEEEEcC-------hHHHHHHHHHHHhCCCeeEE
Q 006905 544 LYKDRCETEDILLEMDRILRPEGGVIFRDD-------VDELVKVKRIIDALKWQSQI 593 (626)
Q Consensus 544 ~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~-------~~~~~~~~~~~~~l~w~~~~ 593 (626)
....++.++.|+|||||.+++.+. .+....+.+.++...|+..+
T Consensus 203 ------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 203 ------RTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp ------SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred ------hHHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEE
Confidence 335788999999999999999643 24578889999999999876
No 316
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.70 E-value=1.2e-08 Score=108.12 Aligned_cols=98 Identities=16% Similarity=0.140 Sum_probs=75.4
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc---cceeccccccCCCCC-Cccceeeeccc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL---VGTYTNWCEAMSTYP-RTYDLIHADSV 541 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~~~~e~~~~yp-~t~Dlih~~~~ 541 (626)
-.+|||+|||.|.++..|++.+. ..|+.+|.+ .++..+.++ |+ +.+++.-.+.+ .+| .+||+|.+..+
T Consensus 67 ~~~VLDvGcG~G~~~~~la~~g~--~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~Iis~~~ 142 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAAKAGA--RKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEV-ELPVEKVDIIISEWM 142 (349)
T ss_dssp TCEEEEESCTTSHHHHHHHHTTC--SEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTC-CCSSSCEEEEEECCC
T ss_pred CCEEEEEeccchHHHHHHHHCCC--CEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHc-cCCCCceEEEEEccc
Confidence 35799999999999999998864 378899999 688877664 44 34444322333 356 89999999877
Q ss_pred cccCCCCCCHHHHHHHhhhhccCCcEEEEE
Q 006905 542 FSLYKDRCETEDILLEMDRILRPEGGVIFR 571 (626)
Q Consensus 542 f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~ 571 (626)
...+.....++.+|.+++|+|||||.+|+.
T Consensus 143 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 143 GYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp BBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred cccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 666555567899999999999999999753
No 317
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.69 E-value=4.2e-08 Score=103.89 Aligned_cols=138 Identities=20% Similarity=0.191 Sum_probs=95.2
Q ss_pred CCceeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHHHh----cc---cceeccccccCCCCCCccceeee
Q 006905 468 GRYRNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIYER----GL---VGTYTNWCEAMSTYPRTYDLIHA 538 (626)
Q Consensus 468 ~~~r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~~~~e~~~~yp~t~Dlih~ 538 (626)
....+|||+|||.|.++..|++. ++ +++.+|. +.+++.+.++ |+ +...+. ..+..+|..||+|.+
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~---~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~--d~~~~~~~~~D~v~~ 254 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHL---RGTLVEL-AGPAERARRRFADAGLADRVTVAEG--DFFKPLPVTADVVLL 254 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTC---EEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEEC--CTTSCCSCCEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCC---EEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeC--CCCCcCCCCCCEEEE
Confidence 44678999999999999999875 33 6788888 6899888764 33 233321 122346766999999
Q ss_pred ccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcC--h--H-----------------------HHHHHHHHHHhCCCee
Q 006905 539 DSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDD--V--D-----------------------ELVKVKRIIDALKWQS 591 (626)
Q Consensus 539 ~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~--~--~-----------------------~~~~~~~~~~~l~w~~ 591 (626)
..++.++.+. ....+|.++.|+|||||+++|.|. . + ....++++++.-.++.
T Consensus 255 ~~vl~~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~ 333 (374)
T 1qzz_A 255 SFVLLNWSDE-DALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLAL 333 (374)
T ss_dssp ESCGGGSCHH-HHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEE
T ss_pred eccccCCCHH-HHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCce
Confidence 9999887642 224799999999999999999876 2 1 2345666777777776
Q ss_pred EEeecCCCCC--CcceEEEEEec
Q 006905 592 QIVDHEDGPL--EREKLLFAVKL 612 (626)
Q Consensus 592 ~~~~~e~~~~--~~e~~l~~~K~ 612 (626)
..+..-.+.. -...++.++|.
T Consensus 334 ~~~~~~~~~~~~~~~~~i~~~~~ 356 (374)
T 1qzz_A 334 ASERTSGSTTLPFDFSILEFTAV 356 (374)
T ss_dssp EEEEEECCSSCSSCEEEEEEEEC
T ss_pred EEEEECCCCcccCCcEEEEEEEC
Confidence 5332222221 11278888885
No 318
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.69 E-value=7.3e-08 Score=103.32 Aligned_cols=97 Identities=13% Similarity=0.141 Sum_probs=72.9
Q ss_pred CCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCCC--eEEEEcccccCCCCCCCeeEEEecc---
Q 006905 212 IRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGVP--ALIGVLAAERLPYPSRAFDMAHCSR--- 283 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~~--~~~~v~d~~~Lpf~d~sFDlV~~~~--- 283 (626)
+++|||||||+|.++..+++. .|+++|.++ +. ..+.+.++.++.. +.+..++.+.+.++ +.||+|+|..
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~-~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~ 160 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IW-QQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGY 160 (376)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-TH-HHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBT
T ss_pred CCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HH-HHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeecccc
Confidence 458999999999988877775 589999876 44 3445566666653 67777788888776 5799999833
Q ss_pred ccccccccHHHHHHHHHhcccCCeEEEEE
Q 006905 284 CLIPWNQFGGIYLIEVDRVLRPGGYWILS 312 (626)
Q Consensus 284 ~l~h~~~~~~~~L~Ei~RvLKPGG~lvis 312 (626)
++ ........++....|.|||||.++-.
T Consensus 161 ~l-~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 161 GL-LHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp TB-TTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred cc-cccchhhhHHHHHHhhCCCCceECCc
Confidence 33 22333478889999999999998764
No 319
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.69 E-value=8.6e-09 Score=106.74 Aligned_cols=103 Identities=14% Similarity=0.038 Sum_probs=77.4
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc-------------cceeccccccCC---CCC---
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL-------------VGTYTNWCEAMS---TYP--- 530 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl-------------i~~~~~~~e~~~---~yp--- 530 (626)
-.+|||+|||.|.++..|++.+. .+|+.+|.++.+++.+.++.- +..++.=++.+. .++
T Consensus 35 ~~~VLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 35 DITVLDLGCGKGGDLLKWKKGRI--NKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp CCEEEEETCTTTTTHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCEEEEECCCCcHHHHHHHhcCC--CEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 45899999999999999987643 278999999999998887631 222332223332 242
Q ss_pred CccceeeeccccccC-CCCCCHHHHHHHhhhhccCCcEEEEEcCh
Q 006905 531 RTYDLIHADSVFSLY-KDRCETEDILLEMDRILRPEGGVIFRDDV 574 (626)
Q Consensus 531 ~t~Dlih~~~~f~~~-~~~c~~~~~l~E~dRiLRPgG~~i~~d~~ 574 (626)
.+||+|.|..++.+. .+.-+...+|.++.|+|||||.++++...
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 599999998888765 44335578999999999999999998654
No 320
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.69 E-value=9.8e-08 Score=94.89 Aligned_cols=107 Identities=17% Similarity=0.193 Sum_probs=72.3
Q ss_pred HHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcCCC--eEEEEccccc-CC-
Q 006905 200 DIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERGVP--ALIGVLAAER-LP- 270 (626)
Q Consensus 200 ~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg~~--~~~~v~d~~~-Lp- 270 (626)
.+..++...+ ..+|||||||+|.++..|++. .++++|+++..+..+.. .....+.. +.+..+|... ++
T Consensus 51 ~l~~l~~~~~--~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~-~~~~~g~~~~v~~~~~d~~~~~~~ 127 (239)
T 2hnk_A 51 FLNILTKISG--AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARK-YWKENGLENKIFLKLGSALETLQV 127 (239)
T ss_dssp HHHHHHHHHT--CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHH-HHHHTTCGGGEEEEESCHHHHHHH
T ss_pred HHHHHHHhhC--cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCCEEEEECCHHHHHHH
Confidence 3444443333 458999999999999988864 58888887754443332 22233442 5666666432 22
Q ss_pred -------------CCC--CCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEe
Q 006905 271 -------------YPS--RAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 271 -------------f~d--~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
|++ ++||+|++.... .....++.++.++|||||.+++..
T Consensus 128 ~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~----~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 128 LIDSKSAPSWASDFAFGPSSIDLFFLDADK----ENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp HHHCSSCCGGGTTTCCSTTCEEEEEECSCG----GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHhhcccccccccccCCCCCcCEEEEeCCH----HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 333 789999987543 234678999999999999999974
No 321
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.69 E-value=5.7e-08 Score=102.11 Aligned_cols=143 Identities=13% Similarity=0.192 Sum_probs=97.4
Q ss_pred HhhhhcCCCCC-ceeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHHHh----cc---cceec-cccccCC
Q 006905 459 TMNNQLGQSGR-YRNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIYER----GL---VGTYT-NWCEAMS 527 (626)
Q Consensus 459 ~~~~~~~~~~~-~r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~-~~~e~~~ 527 (626)
.++..+.. .. ..+|||+|||.|.++..|++. ++ .++.+|. +.+++.+.++ |+ +.... |..+.-.
T Consensus 169 ~~l~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 243 (352)
T 3mcz_A 169 DVVSELGV-FARARTVIDLAGGHGTYLAQVLRRHPQL---TGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARN 243 (352)
T ss_dssp HHHHTCGG-GTTCCEEEEETCTTCHHHHHHHHHCTTC---EEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGG
T ss_pred HHHHhCCC-cCCCCEEEEeCCCcCHHHHHHHHhCCCC---eEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcc
Confidence 34444444 33 789999999999999999875 33 5667788 4788877664 44 22222 2222111
Q ss_pred CCCCccceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh--------------H-------------HHHHH
Q 006905 528 TYPRTYDLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV--------------D-------------ELVKV 580 (626)
Q Consensus 528 ~yp~t~Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~--------------~-------------~~~~~ 580 (626)
..|..||+|.+..++.++.+. +...+|.++.|+|||||+++|.|.. + ....+
T Consensus 244 ~~~~~~D~v~~~~vlh~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~ 322 (352)
T 3mcz_A 244 FEGGAADVVMLNDCLHYFDAR-EAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWI 322 (352)
T ss_dssp GTTCCEEEEEEESCGGGSCHH-HHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHH
T ss_pred cCCCCccEEEEecccccCCHH-HHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHH
Confidence 146789999999999988642 4578999999999999999997521 0 13456
Q ss_pred HHHHHhCCCeeEEeecCCCCCCcceEEEEEec
Q 006905 581 KRIIDALKWQSQIVDHEDGPLEREKLLFAVKL 612 (626)
Q Consensus 581 ~~~~~~l~w~~~~~~~e~~~~~~e~~l~~~K~ 612 (626)
+++++.-.++..... .+...+++++|+
T Consensus 323 ~~ll~~aGf~~~~~~-----~g~~~l~~a~kp 349 (352)
T 3mcz_A 323 AGVVRDAGLAVGERS-----IGRYTLLIGQRS 349 (352)
T ss_dssp HHHHHHTTCEEEEEE-----ETTEEEEEEECC
T ss_pred HHHHHHCCCceeeec-----cCceEEEEEecC
Confidence 677777777765421 245779999985
No 322
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.69 E-value=6.6e-08 Score=99.01 Aligned_cols=103 Identities=11% Similarity=0.027 Sum_probs=78.0
Q ss_pred CCceeEEeccCch---hhHhhhhhCC--CeEEEEeccCccCcccHHHHHHhc----ccceec-ccccc-----C----CC
Q 006905 468 GRYRNILDMNAHL---GGFAAALIDF--PVWVMNVVPAEAKINTLGVIYERG----LVGTYT-NWCEA-----M----ST 528 (626)
Q Consensus 468 ~~~r~vlD~g~g~---G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~rg----li~~~~-~~~e~-----~----~~ 528 (626)
..++.|||+|||+ |.++..+... +. .|+.+|.++.||..+.++- -+..++ |..+. . ..
T Consensus 76 ~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~---~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 152 (274)
T 2qe6_A 76 AGISQFLDLGSGLPTVQNTHEVAQSVNPDA---RVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRM 152 (274)
T ss_dssp TCCCEEEEETCCSCCSSCHHHHHHHHCTTC---EEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHH
T ss_pred cCCCEEEEECCCCCCCChHHHHHHHhCCCC---EEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhcc
Confidence 3478999999999 9887666542 33 7899999999999988763 122232 21110 0 13
Q ss_pred CC-CccceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh
Q 006905 529 YP-RTYDLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV 574 (626)
Q Consensus 529 yp-~t~Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~ 574 (626)
+| .+||+|.+..+|.+..+. +...+|.|+.|+|||||+++|++..
T Consensus 153 ~d~~~~d~v~~~~vlh~~~d~-~~~~~l~~~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 153 IDFSRPAAIMLVGMLHYLSPD-VVDRVVGAYRDALAPGSYLFMTSLV 198 (274)
T ss_dssp CCTTSCCEEEETTTGGGSCTT-THHHHHHHHHHHSCTTCEEEEEEEB
T ss_pred CCCCCCEEEEEechhhhCCcH-HHHHHHHHHHHhCCCCcEEEEEEec
Confidence 55 689999999999998875 7899999999999999999998643
No 323
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.68 E-value=2.9e-08 Score=103.51 Aligned_cols=98 Identities=16% Similarity=0.133 Sum_probs=65.4
Q ss_pred CCEEEEeCCCCchHHHHHhhC-CcEEEeC----CccchHHHHHHHHHHcCC-CeEEEEc-ccccCCCCCCCeeEEEeccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR-NIITMSF----APRDTHEAQVQFALERGV-PALIGVL-AAERLPYPSRAFDMAHCSRC 284 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~-~V~avdi----s~~dls~a~i~~A~erg~-~~~~~v~-d~~~Lpf~d~sFDlV~~~~~ 284 (626)
+.+|||||||+|.++..++++ .|+++|+ ++.++.... ....+. .+.+... |...+| .++||+|+|..+
T Consensus 83 g~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~~~~~~~~---~~~~~~~~v~~~~~~D~~~l~--~~~fD~V~sd~~ 157 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHEEPIP---MSTYGWNLVRLQSGVDVFFIP--PERCDTLLCDIG 157 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCC---CCSTTGGGEEEECSCCTTTSC--CCCCSEEEECCC
T ss_pred CCEEEEEcCCCCHHHHHHHhcCCEEEEeccccCchhHHHHHH---hhhcCCCCeEEEeccccccCC--cCCCCEEEECCc
Confidence 569999999999999999987 6889998 332221000 011111 2455555 555554 568999999776
Q ss_pred cc--cccccHH---HHHHHHHhcccCCeEEEEEeC
Q 006905 285 LI--PWNQFGG---IYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 285 l~--h~~~~~~---~~L~Ei~RvLKPGG~lvis~p 314 (626)
++ ++..+.. .+|.++.++|||||.|++...
T Consensus 158 ~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 158 ESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred cccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 52 2222222 578999999999999998653
No 324
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.68 E-value=5.1e-08 Score=103.36 Aligned_cols=97 Identities=19% Similarity=0.153 Sum_probs=71.5
Q ss_pred CCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHc----C-CCeEEEEcccccCCCCCCCeeEEEeccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALER----G-VPALIGVLAAERLPYPSRAFDMAHCSRC 284 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~er----g-~~~~~~v~d~~~Lpf~d~sFDlV~~~~~ 284 (626)
..+|||||||+|.++..++++ ++.++.+ |+ +..++.++++ + ..+.+..+|....|.+ .+|+|++..+
T Consensus 180 ~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~---dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~--~~D~~~~~~v 253 (353)
T 4a6d_A 180 FPLMCDLGGGAGALAKECMSLYPGCKITVF---DI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP--EADLYILARV 253 (353)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCSSCEEEEE---EC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCC--CCSEEEEESS
T ss_pred CCeEEeeCCCCCHHHHHHHHhCCCceeEec---cC-HHHHHHHHHhhhhcccCceeeecCccccCCCC--CceEEEeeee
Confidence 458999999999999999987 4433333 22 2334444432 1 2467777886655554 4799999999
Q ss_pred cccccccH-HHHHHHHHhcccCCeEEEEEeC
Q 006905 285 LIPWNQFG-GIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 285 l~h~~~~~-~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+|+|.++. ..+|+++.++|+|||.++|...
T Consensus 254 lh~~~d~~~~~iL~~~~~al~pgg~lli~e~ 284 (353)
T 4a6d_A 254 LHDWADGKCSHLLERIYHTCKPGGGILVIES 284 (353)
T ss_dssp GGGSCHHHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHhhCCCCCEEEEEEe
Confidence 99998754 6789999999999999999764
No 325
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.68 E-value=4.2e-08 Score=103.70 Aligned_cols=102 Identities=10% Similarity=0.178 Sum_probs=76.2
Q ss_pred hhcCCCCCceeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHHHh----cc---cceeccccccCCCCC-C
Q 006905 462 NQLGQSGRYRNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIYER----GL---VGTYTNWCEAMSTYP-R 531 (626)
Q Consensus 462 ~~~~~~~~~r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~~~~e~~~~yp-~ 531 (626)
..+.. ....+|||+|||.|.++..|+++ ++ +++.+|. +.+++.+.++ |+ +.... ..+...| .
T Consensus 184 ~~~~~-~~~~~vLDvG~G~G~~~~~l~~~~p~~---~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~~~~ 255 (359)
T 1x19_A 184 EEAKL-DGVKKMIDVGGGIGDISAAMLKHFPEL---DSTILNL-PGAIDLVNENAAEKGVADRMRGIA---VDIYKESYP 255 (359)
T ss_dssp HHCCC-TTCCEEEEESCTTCHHHHHHHHHCTTC---EEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEE---CCTTTSCCC
T ss_pred HhcCC-CCCCEEEEECCcccHHHHHHHHHCCCC---eEEEEec-HHHHHHHHHHHHhcCCCCCEEEEe---CccccCCCC
Confidence 33444 45679999999999999999875 33 6778888 6999988776 54 33332 3333323 3
Q ss_pred ccceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 532 TYDLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 532 t~Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
.+|+|.+..++.++.+. ....+|.++.|+|||||.++|.|
T Consensus 256 ~~D~v~~~~vlh~~~d~-~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 256 EADAVLFCRILYSANEQ-LSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp CCSEEEEESCGGGSCHH-HHHHHHHHHHTTCCTTCEEEEEE
T ss_pred CCCEEEEechhccCCHH-HHHHHHHHHHHhcCCCCEEEEEe
Confidence 44999999999988642 35789999999999999999876
No 326
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.67 E-value=6.2e-08 Score=98.61 Aligned_cols=105 Identities=17% Similarity=0.157 Sum_probs=74.0
Q ss_pred HHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccccCCCC
Q 006905 200 DIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAERLPYP 272 (626)
Q Consensus 200 ~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~Lpf~ 272 (626)
.+...+...+ +.+|||+|||+|.++..+++. .++++|+++..+..+.. .+...++ .+.+...|.... ++
T Consensus 103 ~i~~~~~~~~--~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~-~~ 178 (277)
T 1o54_A 103 FIAMMLDVKE--GDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAES-NLTKWGLIERVTIKVRDISEG-FD 178 (277)
T ss_dssp HHHHHTTCCT--TCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHH-HHHHTTCGGGEEEECCCGGGC-CS
T ss_pred HHHHHhCCCC--CCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHH-HHHHcCCCCCEEEEECCHHHc-cc
Confidence 4444444433 458999999999999888765 47888887754443332 2333354 466666776555 66
Q ss_pred CCCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 273 SRAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 273 d~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+++||+|+++. .++..++.++.++|+|||.+++..+
T Consensus 179 ~~~~D~V~~~~------~~~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 179 EKDVDALFLDV------PDPWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp CCSEEEEEECC------SCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred CCccCEEEECC------cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 77899999843 2346789999999999999999865
No 327
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.67 E-value=2.9e-08 Score=103.69 Aligned_cols=102 Identities=15% Similarity=0.130 Sum_probs=73.2
Q ss_pred CCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHH-Hc----CCCeEEEEccccc-CCCCCCCeeEEE
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFAL-ER----GVPALIGVLAAER-LPYPSRAFDMAH 280 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~-er----g~~~~~~v~d~~~-Lpf~d~sFDlV~ 280 (626)
...+|||||||+|.++..++++ .++++|+++..+..+...+.. .. ...+.+..+|... ++..+++||+|+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 3568999999999999999876 588899877555444333322 11 2346777777554 444567899999
Q ss_pred eccccccc---cc--c--HHHHHHHHHhcccCCeEEEEEe
Q 006905 281 CSRCLIPW---NQ--F--GGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 281 ~~~~l~h~---~~--~--~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
+.... ++ .. . ...++.++.++|||||.|++..
T Consensus 157 ~d~~~-~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 157 IDLTD-PVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EECCC-CBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred ECCCC-cccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 97654 44 11 1 2689999999999999999964
No 328
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.67 E-value=1.3e-07 Score=97.45 Aligned_cols=117 Identities=16% Similarity=0.161 Sum_probs=78.3
Q ss_pred cHHHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCCC--eEEEEcccc
Q 006905 193 GADAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGVP--ALIGVLAAE 267 (626)
Q Consensus 193 ga~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~~--~~~~v~d~~ 267 (626)
.....++.+.+.+.... ..+|||+|||+|.++..|+.. .++++|+++..+..+.. .+...++. +.+...|..
T Consensus 107 ~te~lv~~~l~~~~~~~--~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~-n~~~~~l~~~v~~~~~D~~ 183 (284)
T 1nv8_A 107 ETEELVELALELIRKYG--IKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARK-NAERHGVSDRFFVRKGEFL 183 (284)
T ss_dssp THHHHHHHHHHHHHHHT--CCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHH-HHHHTTCTTSEEEEESSTT
T ss_pred hHHHHHHHHHHHhcccC--CCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCceEEEECcch
Confidence 34455556665554322 348999999999999998875 68888888765544333 33344553 677777755
Q ss_pred cCCCCCCCe---eEEEecccccccc---------c---------cHHHHHHHHH-hcccCCeEEEEEeC
Q 006905 268 RLPYPSRAF---DMAHCSRCLIPWN---------Q---------FGGIYLIEVD-RVLRPGGYWILSGP 314 (626)
Q Consensus 268 ~Lpf~d~sF---DlV~~~~~l~h~~---------~---------~~~~~L~Ei~-RvLKPGG~lvis~p 314 (626)
. +++ ++| |+|+++...+... + +...+++++. +.|+|||.|++...
T Consensus 184 ~-~~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 184 E-PFK-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp G-GGG-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECC
T ss_pred h-hcc-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 4 222 478 9999984332111 1 1126899999 99999999999754
No 329
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.67 E-value=4.4e-08 Score=90.63 Aligned_cols=132 Identities=14% Similarity=0.141 Sum_probs=83.0
Q ss_pred ceeEEeccCchhhHhhhhhCC---CeEEEEeccCccCcccHHHHHHhcccceec-cccccCCC-------CC-Cccceee
Q 006905 470 YRNILDMNAHLGGFAAALIDF---PVWVMNVVPAEAKINTLGVIYERGLVGTYT-NWCEAMST-------YP-RTYDLIH 537 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~---~v~~mnv~~~~~~~~~l~~~~~rgli~~~~-~~~e~~~~-------yp-~t~Dlih 537 (626)
-.+|||+|||.|.++.+|++. +. +|+.+|.++ +++. .. +...+ |..+ ... ++ ++||+|.
T Consensus 23 ~~~vLd~G~G~G~~~~~l~~~~~~~~---~v~~~D~~~-~~~~---~~-~~~~~~d~~~-~~~~~~~~~~~~~~~~D~i~ 93 (180)
T 1ej0_A 23 GMTVVDLGAAPGGWSQYVVTQIGGKG---RIIACDLLP-MDPI---VG-VDFLQGDFRD-ELVMKALLERVGDSKVQVVM 93 (180)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCTTC---EEEEEESSC-CCCC---TT-EEEEESCTTS-HHHHHHHHHHHTTCCEEEEE
T ss_pred CCeEEEeCCCCCHHHHHHHHHhCCCC---eEEEEECcc-cccc---Cc-EEEEEccccc-chhhhhhhccCCCCceeEEE
Confidence 458999999999999999876 23 677777775 5543 11 23332 2211 110 44 8999999
Q ss_pred eccccccCCCC--CC------HHHHHHHhhhhccCCcEEEEEcCh-HHHHHHHHHHHhCCCeeEE-eec-CCCCCCcceE
Q 006905 538 ADSVFSLYKDR--CE------TEDILLEMDRILRPEGGVIFRDDV-DELVKVKRIIDALKWQSQI-VDH-EDGPLEREKL 606 (626)
Q Consensus 538 ~~~~f~~~~~~--c~------~~~~l~E~dRiLRPgG~~i~~d~~-~~~~~~~~~~~~l~w~~~~-~~~-e~~~~~~e~~ 606 (626)
++..+...... .. ...+|.++.|+|||||.+++.... .....+.+.+... |+... ... .......|..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 172 (180)
T 1ej0_A 94 SDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRSL-FTKVKVRKPDSSRARSREVY 172 (180)
T ss_dssp ECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHHH-EEEEEEECCTTSCTTCCEEE
T ss_pred ECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHHh-hhhEEeecCCcccccCceEE
Confidence 98887654421 00 157899999999999999997532 2334444444443 65443 221 2223356888
Q ss_pred EEEEe
Q 006905 607 LFAVK 611 (626)
Q Consensus 607 l~~~K 611 (626)
+++++
T Consensus 173 ~~~~~ 177 (180)
T 1ej0_A 173 IVATG 177 (180)
T ss_dssp EEEEE
T ss_pred EEEcc
Confidence 88876
No 330
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.67 E-value=2.6e-08 Score=97.51 Aligned_cols=128 Identities=16% Similarity=0.180 Sum_probs=87.3
Q ss_pred ceeEEeccCchhhHhhhhhCC---CeEEEEeccCccCcccHHHHHHh----cc---cceec-cccccCCCCC-----Ccc
Q 006905 470 YRNILDMNAHLGGFAAALIDF---PVWVMNVVPAEAKINTLGVIYER----GL---VGTYT-NWCEAMSTYP-----RTY 533 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~---~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~-~~~e~~~~yp-----~t~ 533 (626)
-.+|||+|||.|.++.+|++. +. .|+.+|.++.+++.+.++ |+ +.+++ |..+.+..++ .+|
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLALPKDG---TLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQY 141 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCTTC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCE
T ss_pred CCEEEEeCCcchHHHHHHHHhCCCCC---EEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCc
Confidence 347999999999999999886 43 789999998999888776 43 33333 3323322233 799
Q ss_pred ceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh------------HHHHHHHHHH----HhCCCeeEEeecC
Q 006905 534 DLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV------------DELVKVKRII----DALKWQSQIVDHE 597 (626)
Q Consensus 534 Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~------------~~~~~~~~~~----~~l~w~~~~~~~e 597 (626)
|+|.++.. .-+...++.++.|+|||||++++.|.. .....++++. ..-+|...+...
T Consensus 142 D~v~~~~~------~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~- 214 (225)
T 3tr6_A 142 DLIYIDAD------KANTDLYYEESLKLLREGGLIAVDNVLRRGQVADEENQSENNQLIRLFNQKVYKDERVDMILIPI- 214 (225)
T ss_dssp EEEEECSC------GGGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEECS-
T ss_pred cEEEECCC------HHHHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccChHHHHHHHHHHHHhcCCCeEEEEEEc-
Confidence 99997442 234678999999999999999997542 1122344433 334566665532
Q ss_pred CCCCCcceEEEEEec
Q 006905 598 DGPLEREKLLFAVKL 612 (626)
Q Consensus 598 ~~~~~~e~~l~~~K~ 612 (626)
.+.+++++|+
T Consensus 215 -----~dG~~~~~k~ 224 (225)
T 3tr6_A 215 -----GDGLTLARKK 224 (225)
T ss_dssp -----TTCEEEEEEC
T ss_pred -----CCccEEEEEC
Confidence 3568888874
No 331
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.67 E-value=2e-08 Score=106.02 Aligned_cols=96 Identities=15% Similarity=0.146 Sum_probs=71.2
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc---cceeccccccCCCCC-Cccceeeeccc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL---VGTYTNWCEAMSTYP-RTYDLIHADSV 541 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~~~~e~~~~yp-~t~Dlih~~~~ 541 (626)
-.+|||+|||+|.++..+++.+. ..|+.+|.+ .+++.+.++ |+ |.+++.-.+.+ .+| .+||+|.+..+
T Consensus 65 ~~~VLDiGcGtG~ls~~la~~g~--~~v~gvD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~D~Ivs~~~ 140 (340)
T 2fyt_A 65 DKVVLDVGCGTGILSMFAAKAGA--KKVLGVDQS-EILYQAMDIIRLNKLEDTITLIKGKIEEV-HLPVEKVDVIISEWM 140 (340)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC--SEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTS-CCSCSCEEEEEECCC
T ss_pred CCEEEEeeccCcHHHHHHHHcCC--CEEEEEChH-HHHHHHHHHHHHcCCCCcEEEEEeeHHHh-cCCCCcEEEEEEcCc
Confidence 45799999999999999998864 378889998 488877664 33 34444222222 355 89999999875
Q ss_pred cccCCCCCCHHHHHHHhhhhccCCcEEE
Q 006905 542 FSLYKDRCETEDILLEMDRILRPEGGVI 569 (626)
Q Consensus 542 f~~~~~~c~~~~~l~E~dRiLRPgG~~i 569 (626)
.....+.-+++.+|.++.|+|||||.++
T Consensus 141 ~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 141 GYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp BTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 4434333466789999999999999998
No 332
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.66 E-value=1.2e-08 Score=101.46 Aligned_cols=95 Identities=19% Similarity=0.119 Sum_probs=62.1
Q ss_pred ceeEEeccCchhhHhhhhh--CCCeEEEEeccCccC-cccHHHH---HH----hcc--cceeccccccCCCCC----Ccc
Q 006905 470 YRNILDMNAHLGGFAAALI--DFPVWVMNVVPAEAK-INTLGVI---YE----RGL--VGTYTNWCEAMSTYP----RTY 533 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~--~~~v~~mnv~~~~~~-~~~l~~~---~~----rgl--i~~~~~~~e~~~~yp----~t~ 533 (626)
-..|||+|||.|.++..|+ ..+. +|+++|.+ +.|++++ .+ +|+ +.... .....+| ..+
T Consensus 25 ~~~vLDiGCG~G~~~~~la~~~~~~---~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~---~d~~~l~~~~~d~v 98 (225)
T 3p2e_A 25 DRVHIDLGTGDGRNIYKLAINDQNT---FYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVI---AAAESLPFELKNIA 98 (225)
T ss_dssp SEEEEEETCTTSHHHHHHHHTCTTE---EEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEEC---CBTTBCCGGGTTCE
T ss_pred CCEEEEEeccCcHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEE---cCHHHhhhhccCeE
Confidence 4679999999999999998 4444 89999999 7787776 33 344 22222 3333445 334
Q ss_pred ceeeecccccc--CCCCCCHHHHHHHhhhhccCCcEEEE
Q 006905 534 DLIHADSVFSL--YKDRCETEDILLEMDRILRPEGGVIF 570 (626)
Q Consensus 534 Dlih~~~~f~~--~~~~c~~~~~l~E~dRiLRPgG~~i~ 570 (626)
|.+++...+.. ...+-+...+|.|+.|+|||||.++|
T Consensus 99 ~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 99 DSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 44444221111 01112235789999999999999999
No 333
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.66 E-value=4.5e-08 Score=102.11 Aligned_cols=140 Identities=13% Similarity=0.191 Sum_probs=96.2
Q ss_pred hhhhcCCCCCceeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHHHh----cc---cceeccccccCCCCC
Q 006905 460 MNNQLGQSGRYRNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIYER----GL---VGTYTNWCEAMSTYP 530 (626)
Q Consensus 460 ~~~~~~~~~~~r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~~~~e~~~~yp 530 (626)
++..+.. .. .+|||+|||.|.++..|++. +. .++.+|. +.+++.+.++ |+ +..... ..+..+|
T Consensus 160 ~~~~~~~-~~-~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~--d~~~~~~ 231 (334)
T 2ip2_A 160 IPRLLDF-RG-RSFVDVGGGSGELTKAILQAEPSA---RGVMLDR-EGSLGVARDNLSSLLAGERVSLVGG--DMLQEVP 231 (334)
T ss_dssp HHHHSCC-TT-CEEEEETCTTCHHHHHHHHHCTTC---EEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEES--CTTTCCC
T ss_pred HHHhCCC-CC-CEEEEeCCCchHHHHHHHHHCCCC---EEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecC--CCCCCCC
Confidence 3333444 44 89999999999999999865 33 6788888 6899888775 32 333331 1223467
Q ss_pred CccceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh-------------H------------HHHHHHHHHH
Q 006905 531 RTYDLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV-------------D------------ELVKVKRIID 585 (626)
Q Consensus 531 ~t~Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~-------------~------------~~~~~~~~~~ 585 (626)
..||+|.+..++.++.+. ....+|.++.|+|||||+++|.|.. + ....++++++
T Consensus 232 ~~~D~v~~~~vl~~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~ 310 (334)
T 2ip2_A 232 SNGDIYLLSRIIGDLDEA-ASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLG 310 (334)
T ss_dssp SSCSEEEEESCGGGCCHH-HHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHH
T ss_pred CCCCEEEEchhccCCCHH-HHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHH
Confidence 889999999999887642 3358999999999999999998531 0 1345566677
Q ss_pred hCCCeeEEeecCCCCCCcceEEEEEe
Q 006905 586 ALKWQSQIVDHEDGPLEREKLLFAVK 611 (626)
Q Consensus 586 ~l~w~~~~~~~e~~~~~~e~~l~~~K 611 (626)
.-.++..-+..-. ....|+.++|
T Consensus 311 ~aGf~~~~~~~~~---~~~~~i~~~~ 333 (334)
T 2ip2_A 311 RGGFAVERIVDLP---METRMIVAAR 333 (334)
T ss_dssp HTTEEEEEEEEET---TTEEEEEEEE
T ss_pred HCCCceeEEEECC---CCCEEEEEEe
Confidence 7777654322221 2356788776
No 334
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.66 E-value=4.7e-08 Score=103.07 Aligned_cols=114 Identities=6% Similarity=-0.054 Sum_probs=75.8
Q ss_pred HHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCC---eEEEEcccccCCC--
Q 006905 199 DDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVP---ALIGVLAAERLPY-- 271 (626)
Q Consensus 199 ~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~---~~~~v~d~~~Lpf-- 271 (626)
+.+.+.+.. .+.+.+|||+|||+|.++..++.. .|+++|+++..+..+..+.. ..++. +.+...|+..+..
T Consensus 142 ~~l~~~~~~-~~~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~-~~gl~~~~v~~i~~D~~~~l~~~ 219 (332)
T 2igt_A 142 EWLKNAVET-ADRPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQV-LAGLEQAPIRWICEDAMKFIQRE 219 (332)
T ss_dssp HHHHHHHHH-SSSCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH-HHTCTTSCEEEECSCHHHHHHHH
T ss_pred HHHHHHHHh-cCCCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHH-HcCCCccceEEEECcHHHHHHHH
Confidence 344554431 123458999999999999999887 47788887765554443333 33543 6777777554321
Q ss_pred --CCCCeeEEEeccccc---------cccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 272 --PSRAFDMAHCSRCLI---------PWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 272 --~d~sFDlV~~~~~l~---------h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
.+++||+|++..... ++..+...++.++.++|+|||+|++...
T Consensus 220 ~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~ 273 (332)
T 2igt_A 220 ERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTA 273 (332)
T ss_dssp HHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEE
T ss_pred HhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEEC
Confidence 156899999965321 1223346889999999999999888653
No 335
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.65 E-value=5.1e-08 Score=99.59 Aligned_cols=102 Identities=12% Similarity=-0.025 Sum_probs=73.0
Q ss_pred CCEEEEeCCCCchHHHHHhh-----CCcEEEeCCccchHHHHHHHHHHcCC-CeEEEEcccccCCC----CCCCeeEEEe
Q 006905 212 IRTAIDTGCGVASWGAYLLS-----RNIITMSFAPRDTHEAQVQFALERGV-PALIGVLAAERLPY----PSRAFDMAHC 281 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~-----~~V~avdis~~dls~a~i~~A~erg~-~~~~~v~d~~~Lpf----~d~sFDlV~~ 281 (626)
+.+|||+|||+|.++..|++ ..++++|+++..+.... +.+...++ .+.+...|...++. .+++||+|++
T Consensus 84 g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~-~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~ 162 (274)
T 3ajd_A 84 DDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALK-SNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKILL 162 (274)
T ss_dssp TCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHH-HHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHH-HHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEEE
Confidence 55899999999999988886 25889999875554333 33344455 46677777666553 3578999998
Q ss_pred cccccc-----------------ccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 282 SRCLIP-----------------WNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 282 ~~~l~h-----------------~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
...... .......+|.++.++|||||.++++..
T Consensus 163 d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stc 212 (274)
T 3ajd_A 163 DAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTC 212 (274)
T ss_dssp EECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEES
T ss_pred cCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 622111 113347899999999999999999864
No 336
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.64 E-value=4.5e-08 Score=95.83 Aligned_cols=133 Identities=18% Similarity=0.149 Sum_probs=87.0
Q ss_pred ceeEEeccCchhhHhhhhhCC---CeEEEEeccCccCcccHHHHHHh----cc---cceec-cccccCCCCC----Cccc
Q 006905 470 YRNILDMNAHLGGFAAALIDF---PVWVMNVVPAEAKINTLGVIYER----GL---VGTYT-NWCEAMSTYP----RTYD 534 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~---~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~-~~~e~~~~yp----~t~D 534 (626)
-.+|||+|||.|.++.+|++. +. .|+.+|.++.++..+.++ |+ +.+++ |..+.+..++ .+||
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGG---RVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 457999999999999999887 44 789999998899887765 44 33333 2222222222 5799
Q ss_pred eeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh------------HHHHHHHHHH----HhCCCeeEEeecCC
Q 006905 535 LIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV------------DELVKVKRII----DALKWQSQIVDHED 598 (626)
Q Consensus 535 lih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~------------~~~~~~~~~~----~~l~w~~~~~~~e~ 598 (626)
+|.++.... ....+|.++.|+|||||.+++.+.. .....++++. ..=+|...+.-.-
T Consensus 136 ~v~~d~~~~------~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~- 208 (223)
T 3duw_A 136 FIFIDADKQ------NNPAYFEWALKLSRPGTVIIGDNVVREGEVIDNTSNDPRVQGIRRFYELIAAEPRVSATALQTV- 208 (223)
T ss_dssp EEEECSCGG------GHHHHHHHHHHTCCTTCEEEEESCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEEE-
T ss_pred EEEEcCCcH------HHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCeEEEEEecc-
Confidence 999865422 4568999999999999999986432 1123334433 3345666654330
Q ss_pred CCCCcceEEEEEec
Q 006905 599 GPLEREKLLFAVKL 612 (626)
Q Consensus 599 ~~~~~e~~l~~~K~ 612 (626)
+..+.+.+++++|+
T Consensus 209 ~~~~~dG~~~~~~~ 222 (223)
T 3duw_A 209 GSKGYDGFIMAVVK 222 (223)
T ss_dssp ETTEEEEEEEEEEC
T ss_pred CCCCCCeeEEEEEe
Confidence 11134678888763
No 337
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.64 E-value=3.5e-08 Score=104.35 Aligned_cols=93 Identities=14% Similarity=0.081 Sum_probs=70.0
Q ss_pred CCEEEEeCCCCchHHHHHhhC--C--cEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCCCeeEEEecccccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR--N--IITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSRAFDMAHCSRCLIP 287 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~--~--V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h 287 (626)
..+|||||||+|.++..++++ + ++++|+ + .+++.+++. ..+.+..+|... +++ .||+|+++.++|+
T Consensus 194 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~-----~~~~~a~~~-~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~ 263 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-P-----QVVGNLTGN-ENLNFVGGDMFK-SIP--SADAVLLKWVLHD 263 (358)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-H-----HHHSSCCCC-SSEEEEECCTTT-CCC--CCSEEEEESCGGG
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-H-----HHHhhcccC-CCcEEEeCccCC-CCC--CceEEEEcccccC
Confidence 458999999999999999886 3 455565 2 344444332 236777777665 665 4999999999988
Q ss_pred ccccH-HHHHHHHHhcccC---CeEEEEEeC
Q 006905 288 WNQFG-GIYLIEVDRVLRP---GGYWILSGP 314 (626)
Q Consensus 288 ~~~~~-~~~L~Ei~RvLKP---GG~lvis~p 314 (626)
|.+.. ..+|+++.++||| ||++++...
T Consensus 264 ~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 294 (358)
T 1zg3_A 264 WNDEQSLKILKNSKEAISHKGKDGKVIIIDI 294 (358)
T ss_dssp SCHHHHHHHHHHHHHHTGGGGGGCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 87642 4899999999999 999999753
No 338
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.64 E-value=9.4e-08 Score=110.34 Aligned_cols=102 Identities=11% Similarity=0.180 Sum_probs=76.6
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----------cc--cceeccccccCCCCCCccceee
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----------GL--VGTYTNWCEAMSTYPRTYDLIH 537 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----------gl--i~~~~~~~e~~~~yp~t~Dlih 537 (626)
-.+|||+|||.|.++..|++.+-...+|+++|.++.+++.+.+| |+ +.+++.-.+.+..-.++||+|.
T Consensus 722 g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlVV 801 (950)
T 3htx_A 722 ASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIGT 801 (950)
T ss_dssp CSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEEE
Confidence 45799999999999999999862112799999999999999873 43 3344422222222238999999
Q ss_pred eccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcC
Q 006905 538 ADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDD 573 (626)
Q Consensus 538 ~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~ 573 (626)
+..+|.|..+. ....++.|+.|+|||| .+||+..
T Consensus 802 ~~eVLeHL~dp-~l~~~L~eI~RvLKPG-~LIISTP 835 (950)
T 3htx_A 802 CLEVIEHMEED-QACEFGEKVLSLFHPK-LLIVSTP 835 (950)
T ss_dssp EESCGGGSCHH-HHHHHHHHHHHTTCCS-EEEEEEC
T ss_pred EeCchhhCChH-HHHHHHHHHHHHcCCC-EEEEEec
Confidence 99999998752 2346899999999999 8888653
No 339
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.63 E-value=8.7e-08 Score=95.23 Aligned_cols=97 Identities=18% Similarity=0.163 Sum_probs=69.2
Q ss_pred CCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccc----cCCCCC--CCeeE
Q 006905 212 IRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAE----RLPYPS--RAFDM 278 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~----~Lpf~d--~sFDl 278 (626)
..+|||||||+|..+..|++. .++++|+++..+..+...+ ...+. .+.+..+++. .++..+ ++||+
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~-~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYW-QKAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHH-HHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 348999999999999999875 5888888775444333322 23344 3566666642 233434 78999
Q ss_pred EEeccccccccccHHHHHHHHHhcccCCeEEEEEe
Q 006905 279 AHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 279 V~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
|++... ..+...++.++.++|||||++++..
T Consensus 152 V~~d~~----~~~~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 152 IFIDAD----KRNYPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp EEECSC----GGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred EEECCC----HHHHHHHHHHHHHHcCCCeEEEEeC
Confidence 998653 2334789999999999999999974
No 340
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.63 E-value=5.9e-08 Score=99.50 Aligned_cols=102 Identities=8% Similarity=0.055 Sum_probs=71.5
Q ss_pred CCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHH----cCCCeEEEEccccc-CCCCCCCeeEEEe
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALE----RGVPALIGVLAAER-LPYPSRAFDMAHC 281 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~e----rg~~~~~~v~d~~~-Lpf~d~sFDlV~~ 281 (626)
...+|||||||+|.++..++++ .++++|+++..+..+...+..- ....+.+..+|... ++..+++||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 3568999999999999999876 5788888775444333322211 12346777777544 4444678999999
Q ss_pred cccccccccc----HHHHHHHHHhcccCCeEEEEEe
Q 006905 282 SRCLIPWNQF----GGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 282 ~~~l~h~~~~----~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
.... ++... ...+++++.++|+|||.+++..
T Consensus 155 d~~~-~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 155 DSTE-PVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp SCSS-CCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 6543 33211 1579999999999999999974
No 341
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.62 E-value=1.6e-07 Score=99.91 Aligned_cols=140 Identities=14% Similarity=0.158 Sum_probs=97.8
Q ss_pred hcCCCCCceeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHHHh----cc---cceeccccccCCCCCCcc
Q 006905 463 QLGQSGRYRNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIYER----GL---VGTYTNWCEAMSTYPRTY 533 (626)
Q Consensus 463 ~~~~~~~~r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~~~~e~~~~yp~t~ 533 (626)
.+.. ....+|||+|||.|.++..|++. ++ .++.+|. +.+++.+.++ |+ +..... ..+..+|..|
T Consensus 197 ~~~~-~~~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~--d~~~~~p~~~ 269 (369)
T 3gwz_A 197 AYDF-SGAATAVDIGGGRGSLMAAVLDAFPGL---RGTLLER-PPVAEEARELLTGRGLADRCEILPG--DFFETIPDGA 269 (369)
T ss_dssp HSCC-TTCSEEEEETCTTSHHHHHHHHHCTTC---EEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEEC--CTTTCCCSSC
T ss_pred hCCC-ccCcEEEEeCCCccHHHHHHHHHCCCC---eEEEEcC-HHHHHHHHHhhhhcCcCCceEEecc--CCCCCCCCCc
Confidence 3444 56789999999999999999875 33 5677888 6888877764 43 333321 2224567789
Q ss_pred ceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh------------H------------HHHHHHHHHHhCCC
Q 006905 534 DLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV------------D------------ELVKVKRIIDALKW 589 (626)
Q Consensus 534 Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~------------~------------~~~~~~~~~~~l~w 589 (626)
|+|.+..++.++.+. ....+|.++.|+|||||+++|.|.. + ....++++++.-.+
T Consensus 270 D~v~~~~vlh~~~d~-~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf 348 (369)
T 3gwz_A 270 DVYLIKHVLHDWDDD-DVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGL 348 (369)
T ss_dssp SEEEEESCGGGSCHH-HHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTE
T ss_pred eEEEhhhhhccCCHH-HHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCC
Confidence 999999999887642 2247999999999999999997521 0 14566777888888
Q ss_pred eeEEeecCCCCCCcceEEEEEec
Q 006905 590 QSQIVDHEDGPLEREKLLFAVKL 612 (626)
Q Consensus 590 ~~~~~~~e~~~~~~e~~l~~~K~ 612 (626)
+..-+..- ......|+.++|.
T Consensus 349 ~~~~~~~~--~~~~~svie~~~a 369 (369)
T 3gwz_A 349 RVERSLPC--GAGPVRIVEIRRA 369 (369)
T ss_dssp EEEEEEEC--SSSSEEEEEEEEC
T ss_pred eEEEEEEC--CCCCcEEEEEEeC
Confidence 77644321 1134678888763
No 342
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.62 E-value=1.3e-07 Score=98.05 Aligned_cols=101 Identities=13% Similarity=0.048 Sum_probs=69.3
Q ss_pred CCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHH-c---CCCeEEEEccccc-CCCCCCCeeEEEec
Q 006905 212 IRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALE-R---GVPALIGVLAAER-LPYPSRAFDMAHCS 282 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~e-r---g~~~~~~v~d~~~-Lpf~d~sFDlV~~~ 282 (626)
..+|||||||+|.++..++++ .++++|+++..+..+...+... . ...+.+...|... ++..+++||+|++.
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d 170 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIIID 170 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEEc
Confidence 468999999999999999876 5788888775554433332210 1 2346777777543 44446789999985
Q ss_pred cccccccc-----cHHHHHHHHHhcccCCeEEEEEe
Q 006905 283 RCLIPWNQ-----FGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 283 ~~l~h~~~-----~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
..- ++.. ....++.++.++|||||.|++..
T Consensus 171 ~~~-~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 171 STD-PTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp C-----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCC-cccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 432 3111 12688999999999999999974
No 343
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.62 E-value=1.6e-07 Score=95.18 Aligned_cols=118 Identities=11% Similarity=0.088 Sum_probs=84.7
Q ss_pred CceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhc-------c---cceeccccccCCC---------C
Q 006905 469 RYRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERG-------L---VGTYTNWCEAMST---------Y 529 (626)
Q Consensus 469 ~~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rg-------l---i~~~~~~~e~~~~---------y 529 (626)
.-.+|||+|||.|.++..|+++.- ..+|+.+|.++.+++.+.++- + +.+++ .++.. +
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~---~D~~~~~~~~~~~~~ 111 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLE---ADVTLRAKARVEAGL 111 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEE---CCTTCCHHHHHHTTC
T ss_pred CCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEe---CCHHHHhhhhhhhcc
Confidence 356899999999999999987620 138999999999999887743 2 23343 33332 3
Q ss_pred C-CccceeeeccccccC---------------CCCCCHHHHHHHhhhhccCCcEEEEEcChHHHHHHHHHHHhCCCee
Q 006905 530 P-RTYDLIHADSVFSLY---------------KDRCETEDILLEMDRILRPEGGVIFRDDVDELVKVKRIIDALKWQS 591 (626)
Q Consensus 530 p-~t~Dlih~~~~f~~~---------------~~~c~~~~~l~E~dRiLRPgG~~i~~d~~~~~~~~~~~~~~l~w~~ 591 (626)
+ .+||+|.++--|... ...+.++.++.++.|+|||||++++--..+.+..+...++.- |..
T Consensus 112 ~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~-~~~ 188 (260)
T 2ozv_A 112 PDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQSVAEIIAACGSR-FGG 188 (260)
T ss_dssp CTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGGGHHHHHHHHTTT-EEE
T ss_pred CCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHHHHHHHHHHHHhc-CCc
Confidence 4 899999998444322 234668899999999999999999987777777777777663 654
No 344
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.62 E-value=6.3e-08 Score=95.10 Aligned_cols=136 Identities=13% Similarity=0.071 Sum_probs=88.3
Q ss_pred ceeEEeccCchhhHhhhhhCC---CeEEEEeccCccCcccHHHHHHh----cc---cceec-cccccCCCCC-----Ccc
Q 006905 470 YRNILDMNAHLGGFAAALIDF---PVWVMNVVPAEAKINTLGVIYER----GL---VGTYT-NWCEAMSTYP-----RTY 533 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~---~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~-~~~e~~~~yp-----~t~ 533 (626)
-.+|||+|||.|.++.+|++. +. .|+.+|.++.+++.+.++ |+ +.+++ |..+.+..++ .+|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~f 135 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGA---RLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTL 135 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTC---EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCC
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCC---EEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCce
Confidence 468999999999999999873 43 789999999999988774 44 33333 3334344444 699
Q ss_pred ceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcChH--HHHHHHHHHHhCCCeeEEeec-CCCCCCcceEEEEE
Q 006905 534 DLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDVD--ELVKVKRIIDALKWQSQIVDH-EDGPLEREKLLFAV 610 (626)
Q Consensus 534 Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~~--~~~~~~~~~~~l~w~~~~~~~-e~~~~~~e~~l~~~ 610 (626)
|+|.++....++. ....++.++ |+|||||.+++.+... .-.-++.+...=+++..++.. .......+.+.+++
T Consensus 136 D~V~~d~~~~~~~---~~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~dG~~~~~ 211 (221)
T 3u81_A 136 DMVFLDHWKDRYL---PDTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVRGSSSFECTHYSSYLEYMKVVDGLEKAI 211 (221)
T ss_dssp SEEEECSCGGGHH---HHHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHHHCTTEEEEEEEEEETTTTEEEEEEEEE
T ss_pred EEEEEcCCcccch---HHHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHhhCCCceEEEcccccccCCCCCceEEEE
Confidence 9999976655543 123567777 9999999999976431 111222233344566665431 11122456788887
Q ss_pred ec
Q 006905 611 KL 612 (626)
Q Consensus 611 K~ 612 (626)
+.
T Consensus 212 ~~ 213 (221)
T 3u81_A 212 YQ 213 (221)
T ss_dssp EC
T ss_pred Ee
Confidence 64
No 345
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.62 E-value=5.5e-08 Score=101.27 Aligned_cols=102 Identities=12% Similarity=0.079 Sum_probs=69.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHH----cCCCeEEEEccccc-CCCCCCCeeEEEe
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALE----RGVPALIGVLAAER-LPYPSRAFDMAHC 281 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~e----rg~~~~~~v~d~~~-Lpf~d~sFDlV~~ 281 (626)
...+|||||||+|.++..++++ .++++|+++..+..+...+... ....+.+...|... ++..+++||+|++
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~ 174 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIIT 174 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEE
Confidence 3569999999999999999876 4788888775554433332210 12346777777544 4445678999998
Q ss_pred cccccccccc----HHHHHHHHHhcccCCeEEEEEe
Q 006905 282 SRCLIPWNQF----GGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 282 ~~~l~h~~~~----~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
.... ++... ...+++++.++|||||.|++..
T Consensus 175 d~~~-~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 175 DSSD-PMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp ECC------------CHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCC-CCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 6543 33211 1468999999999999999975
No 346
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.61 E-value=7e-08 Score=100.39 Aligned_cols=132 Identities=17% Similarity=0.246 Sum_probs=94.3
Q ss_pred ceeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHHHh----cc---cceeccccccCC--CCCCccceeee
Q 006905 470 YRNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIYER----GL---VGTYTNWCEAMS--TYPRTYDLIHA 538 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~~~~e~~~--~yp~t~Dlih~ 538 (626)
..+|||+|||.|.++..|++. +. .++.+|.+ .+++.+.++ |+ +...+ ..+. .+|..||+|.+
T Consensus 166 ~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~~~~~~~D~v~~ 238 (335)
T 2r3s_A 166 PLKVLDISASHGLFGIAVAQHNPNA---EIFGVDWA-SVLEVAKENARIQGVASRYHTIA---GSAFEVDYGNDYDLVLL 238 (335)
T ss_dssp CSEEEEETCTTCHHHHHHHHHCTTC---EEEEEECH-HHHHHHHHHHHHHTCGGGEEEEE---SCTTTSCCCSCEEEEEE
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCC---eEEEEecH-HHHHHHHHHHHhcCCCcceEEEe---cccccCCCCCCCcEEEE
Confidence 568999999999999999876 43 78889998 999888775 33 33333 2222 35666999999
Q ss_pred ccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcChH---------------------------HHHHHHHHHHhCCCee
Q 006905 539 DSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDVD---------------------------ELVKVKRIIDALKWQS 591 (626)
Q Consensus 539 ~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~~---------------------------~~~~~~~~~~~l~w~~ 591 (626)
..++.++.+. +...+|.++.|+|||||++++.|... ....++++++.-.++.
T Consensus 239 ~~~l~~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~ 317 (335)
T 2r3s_A 239 PNFLHHFDVA-TCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSH 317 (335)
T ss_dssp ESCGGGSCHH-HHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSE
T ss_pred cchhccCCHH-HHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCe
Confidence 9999887532 45689999999999999999975320 1456677777777876
Q ss_pred EEeecCCCCCCcceEEEEEec
Q 006905 592 QIVDHEDGPLEREKLLFAVKL 612 (626)
Q Consensus 592 ~~~~~e~~~~~~e~~l~~~K~ 612 (626)
.-+..-.+ ...+++++++
T Consensus 318 ~~~~~~~~---~~~~i~~~~~ 335 (335)
T 2r3s_A 318 SQLHSLPT---TQQQVIVAYK 335 (335)
T ss_dssp EEEECCTT---SSSEEEEEEC
T ss_pred eeEEECCC---CceeEEEecC
Confidence 54332222 3467777654
No 347
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.60 E-value=2.7e-07 Score=90.49 Aligned_cols=97 Identities=15% Similarity=0.133 Sum_probs=69.6
Q ss_pred CCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccccC-C-CC--C--CCeeE
Q 006905 212 IRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAERL-P-YP--S--RAFDM 278 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~L-p-f~--d--~sFDl 278 (626)
..+|||||||+|.++..|++. .++++|+++..+..+.. .....+. .+.+..+|.... + +. . ++||+
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~-~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~ 148 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRP-LWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDV 148 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHH-HHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-HHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccE
Confidence 458999999999999999874 58899998865554333 3334454 466777664332 1 11 1 68999
Q ss_pred EEeccccccccccHHHHHHHHHhcccCCeEEEEEe
Q 006905 279 AHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 279 V~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
|++... ......++.++.++|||||.+++..
T Consensus 149 v~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 149 AVVDAD----KENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp EEECSC----STTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECCC----HHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 999653 2334789999999999999999974
No 348
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.60 E-value=8.7e-08 Score=96.53 Aligned_cols=97 Identities=11% Similarity=0.014 Sum_probs=70.4
Q ss_pred CCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEccccc-CCC------CCCCee
Q 006905 212 IRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAER-LPY------PSRAFD 277 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~-Lpf------~d~sFD 277 (626)
..+|||||||+|..+..|++. .++++|+++..+..+.. ...+.+. .+.+..+|+.. ++. ++++||
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~-~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 158 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLP-VIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYD 158 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHH-HHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBS
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEE
Confidence 458999999999999888764 58899998865544333 3334454 36677777543 332 157899
Q ss_pred EEEeccccccccccHHHHHHHHHhcccCCeEEEEEe
Q 006905 278 MAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 278 lV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
+|++... ......++.++.++|||||++++..
T Consensus 159 ~V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 159 FIFVDAD----KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp EEEECSC----STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEcCc----hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 9998653 2345789999999999999999874
No 349
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.60 E-value=3.3e-08 Score=98.93 Aligned_cols=112 Identities=14% Similarity=0.122 Sum_probs=76.8
Q ss_pred eeEEeccCchhhHhhhhhCC------CeEEEEeccCccCcccHHHHHHhc-ccceec-ccccc--CCCCC-Cccceeeec
Q 006905 471 RNILDMNAHLGGFAAALIDF------PVWVMNVVPAEAKINTLGVIYERG-LVGTYT-NWCEA--MSTYP-RTYDLIHAD 539 (626)
Q Consensus 471 r~vlD~g~g~G~faa~l~~~------~v~~mnv~~~~~~~~~l~~~~~rg-li~~~~-~~~e~--~~~yp-~t~Dlih~~ 539 (626)
.+|||+|||+|..++.|++. +. .|+.+|.++.++..+...+ -+.+++ |..+. +...+ .+||+|+++
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~~---~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d 159 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGIDC---QVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFID 159 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCCC---EEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEE
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCCC---EEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEEC
Confidence 47999999999999999874 33 6888999888877665211 133333 22221 12123 379999986
Q ss_pred cccccCCCCCCHHHHHHHhhh-hccCCcEEEEEcCh-----HHHHHHHHHHHhC--CCee
Q 006905 540 SVFSLYKDRCETEDILLEMDR-ILRPEGGVIFRDDV-----DELVKVKRIIDAL--KWQS 591 (626)
Q Consensus 540 ~~f~~~~~~c~~~~~l~E~dR-iLRPgG~~i~~d~~-----~~~~~~~~~~~~l--~w~~ 591 (626)
.. + .++..+|.|+.| +|||||++++.|.. .....+.++++.. .+++
T Consensus 160 ~~--~----~~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~ 213 (236)
T 2bm8_A 160 NA--H----ANTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSM 213 (236)
T ss_dssp SS--C----SSHHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEE
T ss_pred Cc--h----HhHHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEE
Confidence 54 2 267889999998 99999999997632 1123677777777 4554
No 350
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.60 E-value=3.9e-08 Score=94.06 Aligned_cols=100 Identities=17% Similarity=0.203 Sum_probs=74.5
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc--cceec-cccccCCCC-CCccceeeeccc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL--VGTYT-NWCEAMSTY-PRTYDLIHADSV 541 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl--i~~~~-~~~e~~~~y-p~t~Dlih~~~~ 541 (626)
-.+|||+|||+|.++..+++.+. -.|+.+|.++.+++.+.++ |+ +.+++ |+.+....+ +.+||+|.++..
T Consensus 45 ~~~vLDlgcG~G~~~~~~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p 122 (189)
T 3p9n_A 45 GLAVLDLYAGSGALGLEALSRGA--ASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPP 122 (189)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTC--SEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCC
T ss_pred CCEEEEeCCCcCHHHHHHHHCCC--CeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCC
Confidence 35799999999999998887764 2689999999999988775 33 33343 222222224 489999999877
Q ss_pred cccCCCCCCHHHHHHHhhh--hccCCcEEEEEcC
Q 006905 542 FSLYKDRCETEDILLEMDR--ILRPEGGVIFRDD 573 (626)
Q Consensus 542 f~~~~~~c~~~~~l~E~dR--iLRPgG~~i~~d~ 573 (626)
|.+.. -+++.++.++.| +|+|||.+++...
T Consensus 123 ~~~~~--~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 123 YNVDS--ADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp TTSCH--HHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred CCcch--hhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 66532 256789999999 9999999999754
No 351
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.60 E-value=3.1e-07 Score=98.15 Aligned_cols=110 Identities=18% Similarity=0.053 Sum_probs=76.3
Q ss_pred HHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccccCC
Q 006905 197 YIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAERLP 270 (626)
Q Consensus 197 yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~Lp 270 (626)
....+..+. .. .+.+|||+|||+|.++..++.. .++++|+++.++..+..+ +...|+ .+.+.++|+..++
T Consensus 206 la~~l~~~~-~~--~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n-~~~~gl~~~i~~~~~D~~~~~ 281 (373)
T 3tm4_A 206 IANAMIELA-EL--DGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMN-ALAAGVLDKIKFIQGDATQLS 281 (373)
T ss_dssp HHHHHHHHH-TC--CSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHH-HHHTTCGGGCEEEECCGGGGG
T ss_pred HHHHHHHhh-cC--CCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH-HHHcCCCCceEEEECChhhCC
Confidence 334444444 33 3458999999999999998875 689999988666544433 344565 5788889999999
Q ss_pred CCCCCeeEEEeccccccccc------c-HHHHHHHHHhcccCCeEEEEE
Q 006905 271 YPSRAFDMAHCSRCLIPWNQ------F-GGIYLIEVDRVLRPGGYWILS 312 (626)
Q Consensus 271 f~d~sFDlV~~~~~l~h~~~------~-~~~~L~Ei~RvLKPGG~lvis 312 (626)
+++++||+|+++..+..... + ...++.++.|+| ||.+++.
T Consensus 282 ~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i 328 (373)
T 3tm4_A 282 QYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFI 328 (373)
T ss_dssp GTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEE
T ss_pred cccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEE
Confidence 88889999999876432211 1 156888999999 4444444
No 352
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.59 E-value=5.8e-08 Score=99.91 Aligned_cols=98 Identities=13% Similarity=0.120 Sum_probs=69.7
Q ss_pred CCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHc---------CCCeEEEEccccc-CCCCCCCe
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALER---------GVPALIGVLAAER-LPYPSRAF 276 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~er---------g~~~~~~v~d~~~-Lpf~d~sF 276 (626)
...+|||||||+|.++..+++. .++++|+++. +++.++++ ...+.+...|... ++..+++|
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~-----~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~f 152 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDET-----VIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTY 152 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHH-----HHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHH-----HHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCc
Confidence 4569999999999999999875 5788888664 44444432 2346677777544 33336789
Q ss_pred eEEEecccccccccc--H--HHHHHHHHhcccCCeEEEEEeC
Q 006905 277 DMAHCSRCLIPWNQF--G--GIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 277 DlV~~~~~l~h~~~~--~--~~~L~Ei~RvLKPGG~lvis~p 314 (626)
|+|++.... ++... . ..+++++.++|||||.+++...
T Consensus 153 D~Ii~d~~~-~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 153 DVIIVDSSD-PIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp EEEEEECCC-TTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred eEEEEcCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 999995433 33221 1 5899999999999999999753
No 353
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.59 E-value=8.8e-08 Score=93.11 Aligned_cols=93 Identities=17% Similarity=0.123 Sum_probs=69.6
Q ss_pred ceeEEeccCchhhHhhhhhCC---CeEEEEeccCccCcccHHHHHHh----cc---cceec-cccccCCCCCCccceeee
Q 006905 470 YRNILDMNAHLGGFAAALIDF---PVWVMNVVPAEAKINTLGVIYER----GL---VGTYT-NWCEAMSTYPRTYDLIHA 538 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~---~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~-~~~e~~~~yp~t~Dlih~ 538 (626)
-.+|||+|||.|.++.+|++. +. +|+.+|.++.+++.+.++ |+ +.+++ |..+.+...+. ||+|.+
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~ 132 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISS---RVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFM 132 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTC---EEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEE
Confidence 357999999999999999876 33 788899998999887754 33 33333 23333334457 999988
Q ss_pred ccccccCCCCCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 539 DSVFSLYKDRCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 539 ~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
+. ...+...++.++.|+|||||.+++.+
T Consensus 133 ~~------~~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 133 DC------DVFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp ET------TTSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred cC------ChhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 52 23467889999999999999999964
No 354
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.59 E-value=2.6e-08 Score=96.85 Aligned_cols=99 Identities=13% Similarity=0.138 Sum_probs=72.5
Q ss_pred eeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc----cceec-cccccCCCC-CCc-cceeeec
Q 006905 471 RNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL----VGTYT-NWCEAMSTY-PRT-YDLIHAD 539 (626)
Q Consensus 471 r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl----i~~~~-~~~e~~~~y-p~t-~Dlih~~ 539 (626)
.+|||+|||+|.++..++.++. -.|+.+|.++.+++.+.++ |+ +.+++ |..+..... +.+ ||+|.++
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQA--KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CeEEEcCCccCHHHHHHHHccC--CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 4799999999999998777653 3789999999999988775 32 23333 222222223 378 9999998
Q ss_pred cccccCCCCCCHHHHHHHh--hhhccCCcEEEEEcChH
Q 006905 540 SVFSLYKDRCETEDILLEM--DRILRPEGGVIFRDDVD 575 (626)
Q Consensus 540 ~~f~~~~~~c~~~~~l~E~--dRiLRPgG~~i~~d~~~ 575 (626)
..|. .-+.+.++.++ .|+|||||.+++.....
T Consensus 133 ~~~~----~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 133 PPFH----FNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCSS----SCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCCC----CccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 7754 23567889898 78999999999976543
No 355
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.59 E-value=9.1e-08 Score=97.45 Aligned_cols=110 Identities=14% Similarity=0.130 Sum_probs=80.7
Q ss_pred CceeEEeccCchhhHhhhhhCC---CeEEEEeccCccCcccHHHHHHh-----cc--cceec-cccccCCCCC-Ccccee
Q 006905 469 RYRNILDMNAHLGGFAAALIDF---PVWVMNVVPAEAKINTLGVIYER-----GL--VGTYT-NWCEAMSTYP-RTYDLI 536 (626)
Q Consensus 469 ~~r~vlD~g~g~G~faa~l~~~---~v~~mnv~~~~~~~~~l~~~~~r-----gl--i~~~~-~~~e~~~~yp-~t~Dli 536 (626)
.-.+|||+|||.|+++..|++. +. +|+.+|.++.+++.+.++ |+ +.+.+ |..+ .+| .+||+|
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~---~~~~~~fD~V 183 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYALNGKG---TLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD---FISDQMYDAV 183 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTSS---EEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT---CCCSCCEEEE
T ss_pred CcCEEEEecCCCCHHHHHHHHHcCCCC---EEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc---cCcCCCccEE
Confidence 3568999999999999999875 44 789999998999988776 53 23333 2222 345 789999
Q ss_pred eeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcChH-HHHHHHHHHHhCCCeeE
Q 006905 537 HADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDVD-ELVKVKRIIDALKWQSQ 592 (626)
Q Consensus 537 h~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~~-~~~~~~~~~~~l~w~~~ 592 (626)
.++ --+...+|.++.|+|||||.+++.+... ...++.+.+....|...
T Consensus 184 i~~--------~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~~~ 232 (275)
T 1yb2_A 184 IAD--------IPDPWNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMHHL 232 (275)
T ss_dssp EEC--------CSCGGGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEEEE
T ss_pred EEc--------CcCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEE
Confidence 882 1244679999999999999999987654 55666666666555543
No 356
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.59 E-value=3.8e-08 Score=103.04 Aligned_cols=96 Identities=13% Similarity=0.039 Sum_probs=65.7
Q ss_pred CCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHc---------CCCeEEEEccccc-CCCCCCCee
Q 006905 212 IRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALER---------GVPALIGVLAAER-LPYPSRAFD 277 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~er---------g~~~~~~v~d~~~-Lpf~d~sFD 277 (626)
..+|||||||+|.++..+++. .++++|+++.. ++.|+++ ...+.+..+|... ++..+++||
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~-----i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD 183 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMV-----IDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFD 183 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHH-----HHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEE
T ss_pred CCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHH-----HHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCce
Confidence 468999999999999999875 57888886643 3444332 2246677777543 333567899
Q ss_pred EEEeccccccccccH----HHHHHHHHhcccCCeEEEEEe
Q 006905 278 MAHCSRCLIPWNQFG----GIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 278 lV~~~~~l~h~~~~~----~~~L~Ei~RvLKPGG~lvis~ 313 (626)
+|++... .++.... ..+++++.++|+|||.+++..
T Consensus 184 ~Ii~d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 184 VIITDSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp EEEECCC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred EEEEcCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 9998653 2432211 578999999999999999975
No 357
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.59 E-value=5e-07 Score=87.16 Aligned_cols=95 Identities=8% Similarity=-0.020 Sum_probs=67.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCCCeeEEEecccccc
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSRAFDMAHCSRCLIP 287 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h 287 (626)
.+.+|||+|||+|.++..+++. .++++|+++..+..+.. .+...++.+.+...|...++ ++||+|+++..++.
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~-~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~ 124 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIE-NLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPPFGS 124 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHH-HTGGGTTSEEEEESCGGGCC---CCCSEEEECCCCSS
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHH-HHHHcCCCEEEEECchHHcC---CCCCEEEEcCCCcc
Confidence 4568999999999999999886 38888887754433222 22233446778888877765 48999999988755
Q ss_pred cccc-HHHHHHHHHhcccCCeEEEE
Q 006905 288 WNQF-GGIYLIEVDRVLRPGGYWIL 311 (626)
Q Consensus 288 ~~~~-~~~~L~Ei~RvLKPGG~lvi 311 (626)
+... ...++.++.++| ||.+++
T Consensus 125 ~~~~~~~~~l~~~~~~l--~~~~~~ 147 (207)
T 1wy7_A 125 QRKHADRPFLLKAFEIS--DVVYSI 147 (207)
T ss_dssp SSTTTTHHHHHHHHHHC--SEEEEE
T ss_pred ccCCchHHHHHHHHHhc--CcEEEE
Confidence 5422 267899999999 665544
No 358
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.58 E-value=1e-07 Score=100.43 Aligned_cols=137 Identities=23% Similarity=0.280 Sum_probs=93.8
Q ss_pred CCceeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHHHh----cc---cceec-cccccCCCCCCccceee
Q 006905 468 GRYRNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIYER----GL---VGTYT-NWCEAMSTYPRTYDLIH 537 (626)
Q Consensus 468 ~~~r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~-~~~e~~~~yp~t~Dlih 537 (626)
....+|||+|||.|.++.+|++. ++ .++.+|. +.+++.+.++ |+ +...+ |+ +..+|..||+|.
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~---~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~~~~D~v~ 254 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHV---SATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDF---FEPLPRKADAII 254 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTC---EEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCT---TSCCSSCEEEEE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCC---EEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCC---CCCCCCCccEEE
Confidence 44678999999999999999875 33 5677787 5888887764 33 23332 22 234676699999
Q ss_pred eccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh--H------------------------HHHHHHHHHHhCCCee
Q 006905 538 ADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV--D------------------------ELVKVKRIIDALKWQS 591 (626)
Q Consensus 538 ~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~--~------------------------~~~~~~~~~~~l~w~~ 591 (626)
+..++.++.+. +...+|.++.|+|||||+++|.|.. . ....++++++.-.++.
T Consensus 255 ~~~vl~~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 333 (360)
T 1tw3_A 255 LSFVLLNWPDH-DAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVV 333 (360)
T ss_dssp EESCGGGSCHH-HHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEE
T ss_pred EcccccCCCHH-HHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeE
Confidence 99999887642 2357999999999999999998644 0 1345666777777776
Q ss_pred EEeecCCCC--CCcceEEEEEec
Q 006905 592 QIVDHEDGP--LEREKLLFAVKL 612 (626)
Q Consensus 592 ~~~~~e~~~--~~~e~~l~~~K~ 612 (626)
..+..-.++ .....++.++|+
T Consensus 334 ~~~~~~~~~~~~~~~~~i~~~~~ 356 (360)
T 1tw3_A 334 EEVRQLPSPTIPYDLSLLVLAPA 356 (360)
T ss_dssp EEEEEEECSSSSCEEEEEEEEEC
T ss_pred EEEEeCCCCcccCccEEEEEEeC
Confidence 533222111 011568888884
No 359
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.58 E-value=7e-08 Score=96.58 Aligned_cols=117 Identities=17% Similarity=0.174 Sum_probs=79.0
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh------------cc--cceec-cccccCCC-CC-Cc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER------------GL--VGTYT-NWCEAMST-YP-RT 532 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r------------gl--i~~~~-~~~e~~~~-yp-~t 532 (626)
-..|||+|||.|+|+..|++..- ..+|+.+|.++.+++.+.++ |+ +.++. |..+.+.. ++ .+
T Consensus 50 ~~~vLDiGcG~G~~~~~la~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 50 KVTIADIGCGFGGLMIDLSPAFP-EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CEEEEEETCTTSHHHHHHHHHST-TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCEEEEEcCCCCHHHHHHHHhCC-CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 46799999999999999987631 12799999998999888664 55 23333 22221221 44 78
Q ss_pred cceeeeccccccC-------CCCCCHHHHHHHhhhhccCCcEEEE-EcChHHHHHHHHHHHhCCC
Q 006905 533 YDLIHADSVFSLY-------KDRCETEDILLEMDRILRPEGGVIF-RDDVDELVKVKRIIDALKW 589 (626)
Q Consensus 533 ~Dlih~~~~f~~~-------~~~c~~~~~l~E~dRiLRPgG~~i~-~d~~~~~~~~~~~~~~l~w 589 (626)
+|.|... |... ..+-..+.+|.++.|+|+|||.+++ +|..+..+.+.+.+....+
T Consensus 129 ~d~v~~~--~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~ 191 (246)
T 2vdv_E 129 LSKMFFC--FPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKDLHEWMVKHLEEHPL 191 (246)
T ss_dssp EEEEEEE--SCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHHSTT
T ss_pred cCEEEEE--CCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHHHHHHHHHHHHhCcC
Confidence 8887642 2221 1122226899999999999999998 5766666667666655544
No 360
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.58 E-value=3.4e-07 Score=97.68 Aligned_cols=99 Identities=14% Similarity=-0.045 Sum_probs=73.2
Q ss_pred CCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCC-CeEEEEccccc-CCC-CCCCeeEEEecc
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGV-PALIGVLAAER-LPY-PSRAFDMAHCSR 283 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~-~~~~~v~d~~~-Lpf-~d~sFDlV~~~~ 283 (626)
.+.+|||+| |+|.++..++.. .++++|+++.++..+.. .+...|+ .+.+..+|... +|. .+++||+|+++.
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~-~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~ 249 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEK-AANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDP 249 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHH-HHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCEEEEEChhhhhchhhccCCccEEEECC
Confidence 356999999 999999888765 58888888765554433 3334455 57788888777 764 457899999987
Q ss_pred ccccccccHHHHHHHHHhcccCCe-EEEEEe
Q 006905 284 CLIPWNQFGGIYLIEVDRVLRPGG-YWILSG 313 (626)
Q Consensus 284 ~l~h~~~~~~~~L~Ei~RvLKPGG-~lvis~ 313 (626)
.++.. . ...++.++.++||||| .++++.
T Consensus 250 p~~~~-~-~~~~l~~~~~~LkpgG~~~~~~~ 278 (373)
T 2qm3_A 250 PETLE-A-IRAFVGRGIATLKGPRCAGYFGI 278 (373)
T ss_dssp CSSHH-H-HHHHHHHHHHTBCSTTCEEEEEE
T ss_pred CCchH-H-HHHHHHHHHHHcccCCeEEEEEE
Confidence 66333 2 4789999999999999 446654
No 361
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.57 E-value=5.7e-08 Score=94.79 Aligned_cols=119 Identities=14% Similarity=0.078 Sum_probs=76.9
Q ss_pred ceeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHH--------Hhcc--cceeccccccCCCCC-Ccccee
Q 006905 470 YRNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIY--------ERGL--VGTYTNWCEAMSTYP-RTYDLI 536 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~--------~rgl--i~~~~~~~e~~~~yp-~t~Dli 536 (626)
-.+|||+|||.|.++..|++. +. +|+.+|.++.|+..+. .+|+ +...+.-.+.++ ++ .+ |.+
T Consensus 28 ~~~vLDiGcG~G~~~~~la~~~p~~---~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~-~~~~~-d~v 102 (218)
T 3mq2_A 28 DDVVLDVGTGDGKHPYKVARQNPSR---LVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLP-PLSGV-GEL 102 (218)
T ss_dssp SEEEEEESCTTCHHHHHHHHHCTTE---EEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCC-SCCCE-EEE
T ss_pred CCEEEEecCCCCHHHHHHHHHCCCC---EEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCC-CCCCC-CEE
Confidence 567999999999999999887 44 7999999999998643 2343 223332222222 33 55 777
Q ss_pred eeccccccCC--CCCCHHHHHHHhhhhccCCcEEEEEcC------------------hH-HHHHHHHHHHhCCCeeEE
Q 006905 537 HADSVFSLYK--DRCETEDILLEMDRILRPEGGVIFRDD------------------VD-ELVKVKRIIDALKWQSQI 593 (626)
Q Consensus 537 h~~~~f~~~~--~~c~~~~~l~E~dRiLRPgG~~i~~d~------------------~~-~~~~~~~~~~~l~w~~~~ 593 (626)
.....+.... +.-+...+|.|+.|+|||||.++++.. .+ ....+++++..-.|++.-
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~ 180 (218)
T 3mq2_A 103 HVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLAD 180 (218)
T ss_dssp EEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEE
T ss_pred EEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCcee
Confidence 6322111110 001226799999999999999999621 11 233477788888887653
No 362
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.57 E-value=8.5e-09 Score=110.92 Aligned_cols=128 Identities=13% Similarity=0.115 Sum_probs=87.8
Q ss_pred HHHHHHHhhhhcCCCCCceeEEeccCc------hhhHhhhhhCC---CeEEEEeccCccCcccHHHHHHhcccceecccc
Q 006905 453 RLSYYKTMNNQLGQSGRYRNILDMNAH------LGGFAAALIDF---PVWVMNVVPAEAKINTLGVIYERGLVGTYTNWC 523 (626)
Q Consensus 453 ~v~~y~~~~~~~~~~~~~r~vlD~g~g------~G~faa~l~~~---~v~~mnv~~~~~~~~~l~~~~~rgli~~~~~~~ 523 (626)
-...|.+++..+.. .-.+|||+||| +||.+..|+++ +. .|+.+|.++.|. ....-|.++..=+
T Consensus 202 y~~~Ye~lL~~l~~--~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a---~V~GVDiSp~m~---~~~~rI~fv~GDa 273 (419)
T 3sso_A 202 FTPHYDRHFRDYRN--QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRG---QIYGLDIMDKSH---VDELRIRTIQGDQ 273 (419)
T ss_dssp CHHHHHHHHGGGTT--SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTC---EEEEEESSCCGG---GCBTTEEEEECCT
T ss_pred HHHHHHHHHHhhcC--CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCC---EEEEEECCHHHh---hcCCCcEEEEecc
Confidence 35567777766544 34789999999 78888877753 33 789999998873 1111133333212
Q ss_pred ccCCCC------CCccceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh------------------HHHHH
Q 006905 524 EAMSTY------PRTYDLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV------------------DELVK 579 (626)
Q Consensus 524 e~~~~y------p~t~Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~------------------~~~~~ 579 (626)
+.++.. ..+||+|.++.+ +.. .+....|.|+.|+|||||+++|.|-. .+++.
T Consensus 274 ~dlpf~~~l~~~d~sFDlVisdgs--H~~--~d~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~~tii~~ 349 (419)
T 3sso_A 274 NDAEFLDRIARRYGPFDIVIDDGS--HIN--AHVRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQADPQECSGTSLGL 349 (419)
T ss_dssp TCHHHHHHHHHHHCCEEEEEECSC--CCH--HHHHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCSSTTCCTTSHHHH
T ss_pred cccchhhhhhcccCCccEEEECCc--ccc--hhHHHHHHHHHHhcCCCeEEEEEecccccCcccCCCccCCcchhHHHHH
Confidence 222212 379999999753 221 24578999999999999999997532 36888
Q ss_pred HHHHHHhCCCeeE
Q 006905 580 VKRIIDALKWQSQ 592 (626)
Q Consensus 580 ~~~~~~~l~w~~~ 592 (626)
++++++.++|.-.
T Consensus 350 lk~l~D~l~~~~~ 362 (419)
T 3sso_A 350 LKSLIDAIQHQEL 362 (419)
T ss_dssp HHHHHHHHTGGGS
T ss_pred HHHHHHHhccccc
Confidence 9999999998743
No 363
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.56 E-value=6.2e-08 Score=93.80 Aligned_cols=93 Identities=15% Similarity=0.078 Sum_probs=70.4
Q ss_pred CceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc--cceec-cccccCCCCCCccceeeeccc
Q 006905 469 RYRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL--VGTYT-NWCEAMSTYPRTYDLIHADSV 541 (626)
Q Consensus 469 ~~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl--i~~~~-~~~e~~~~yp~t~Dlih~~~~ 541 (626)
.-.+|||+|||.|.++..|++.+. +|+.+|.++.+++.+.++ |+ +.+.+ |..+.. .-..+||+|.++..
T Consensus 77 ~~~~vLdiG~G~G~~~~~la~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~D~i~~~~~ 152 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILAHLVQ---HVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGW-QARAPFDAIIVTAA 152 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC-GGGCCEEEEEESSB
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCC---EEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCC-ccCCCccEEEEccc
Confidence 356899999999999999998854 789999999999988876 33 23333 222211 11289999999888
Q ss_pred cccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh
Q 006905 542 FSLYKDRCETEDILLEMDRILRPEGGVIFRDDV 574 (626)
Q Consensus 542 f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~ 574 (626)
+.+..+ ++.|+|||||++++.-..
T Consensus 153 ~~~~~~---------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 153 PPEIPT---------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CSSCCT---------HHHHTEEEEEEEEEEECS
T ss_pred hhhhhH---------HHHHhcccCcEEEEEEcC
Confidence 876653 688999999999997554
No 364
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.56 E-value=6.1e-08 Score=101.71 Aligned_cols=96 Identities=14% Similarity=0.106 Sum_probs=68.6
Q ss_pred CCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHc---------CCCeEEEEccccc-CCCCCCCee
Q 006905 212 IRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALER---------GVPALIGVLAAER-LPYPSRAFD 277 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~er---------g~~~~~~v~d~~~-Lpf~d~sFD 277 (626)
..+|||||||+|.++..++++ .++++|+++..+ +.|+++ ...+.+...|... ++..+++||
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l-----~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD 191 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVI-----EVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYD 191 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHH-----HHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEE
T ss_pred CCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHH-----HHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCce
Confidence 468999999999999999876 478888876444 344332 2246677777543 333457899
Q ss_pred EEEeccccccccc--cH--HHHHHHHHhcccCCeEEEEEe
Q 006905 278 MAHCSRCLIPWNQ--FG--GIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 278 lV~~~~~l~h~~~--~~--~~~L~Ei~RvLKPGG~lvis~ 313 (626)
+|++...- ++.. .. ..++.++.++|||||.+++..
T Consensus 192 vIi~d~~~-p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 192 VIIVDSSD-PIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp EEEEECCC-SSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCcC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 99986532 3321 11 689999999999999999975
No 365
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.56 E-value=6e-08 Score=101.79 Aligned_cols=96 Identities=15% Similarity=0.175 Sum_probs=73.5
Q ss_pred eeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc---cceeccccccCCCCC-Cccceeeecccc
Q 006905 471 RNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL---VGTYTNWCEAMSTYP-RTYDLIHADSVF 542 (626)
Q Consensus 471 r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~~~~e~~~~yp-~t~Dlih~~~~f 542 (626)
.+|||+|||.|.++..+++.+. ..|+.+|.+ .++..+.++ |+ |.+++.-.+.+ .+| ..||+|.+..+.
T Consensus 40 ~~VLDiGcGtG~ls~~la~~g~--~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~D~Ivs~~~~ 115 (328)
T 1g6q_1 40 KIVLDVGCGTGILSMFAAKHGA--KHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDV-HLPFPKVDIIISEWMG 115 (328)
T ss_dssp CEEEEETCTTSHHHHHHHHTCC--SEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTS-CCSSSCEEEEEECCCB
T ss_pred CEEEEecCccHHHHHHHHHCCC--CEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhc-cCCCCcccEEEEeCch
Confidence 5799999999999999998764 378889998 688877664 44 34444222222 245 899999998776
Q ss_pred ccCCCCCCHHHHHHHhhhhccCCcEEEE
Q 006905 543 SLYKDRCETEDILLEMDRILRPEGGVIF 570 (626)
Q Consensus 543 ~~~~~~c~~~~~l~E~dRiLRPgG~~i~ 570 (626)
......-.++.+|.+++|+|||||.++.
T Consensus 116 ~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 116 YFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp TTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred hhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 6555556788999999999999999983
No 366
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.56 E-value=5.6e-08 Score=97.30 Aligned_cols=105 Identities=12% Similarity=0.101 Sum_probs=73.9
Q ss_pred CceeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHHHh-------cc------------------------
Q 006905 469 RYRNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIYER-------GL------------------------ 515 (626)
Q Consensus 469 ~~r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~r-------gl------------------------ 515 (626)
.-.+|||+|||+|.++..|++. . -..+|+.+|.++.+++.+.++ |+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~-~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRR-SLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGG-GEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhcc-CCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhh
Confidence 3468999999999999999875 1 124899999999999888743 33
Q ss_pred ----cc-------------eec-cccccCCC--C-C-CccceeeeccccccCCCC------CCHHHHHHHhhhhccCCcE
Q 006905 516 ----VG-------------TYT-NWCEAMST--Y-P-RTYDLIHADSVFSLYKDR------CETEDILLEMDRILRPEGG 567 (626)
Q Consensus 516 ----i~-------------~~~-~~~e~~~~--y-p-~t~Dlih~~~~f~~~~~~------c~~~~~l~E~dRiLRPgG~ 567 (626)
+. +.+ |+.+.+.. . + .+||+|.|+-.|...... -....++.++.|+|+|||+
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 209 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAV 209 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCE
T ss_pred hhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcE
Confidence 22 332 32221110 0 3 489999998776644321 2345799999999999999
Q ss_pred EEEEcCh
Q 006905 568 VIFRDDV 574 (626)
Q Consensus 568 ~i~~d~~ 574 (626)
+++.+..
T Consensus 210 l~~~~~~ 216 (250)
T 1o9g_A 210 IAVTDRS 216 (250)
T ss_dssp EEEEESS
T ss_pred EEEeCcc
Confidence 9997654
No 367
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.56 E-value=2.3e-07 Score=92.36 Aligned_cols=109 Identities=18% Similarity=0.132 Sum_probs=79.7
Q ss_pred ceeEEeccCchhhHhhhhhCC---CeEEEEeccCccCcccHHHHHHh-----cc--cceec-cccccCCCCC-Cccceee
Q 006905 470 YRNILDMNAHLGGFAAALIDF---PVWVMNVVPAEAKINTLGVIYER-----GL--VGTYT-NWCEAMSTYP-RTYDLIH 537 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~---~v~~mnv~~~~~~~~~l~~~~~r-----gl--i~~~~-~~~e~~~~yp-~t~Dlih 537 (626)
-.+|||+|||.|.++.+|++. +. +|+.+|.++.+++.+.++ |. +.+.+ |..+. .+| .+||+|.
T Consensus 97 ~~~vLdiG~G~G~~~~~l~~~~~~~~---~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~--~~~~~~~D~v~ 171 (258)
T 2pwy_A 97 GMRVLEAGTGSGGLTLFLARAVGEKG---LVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA--ELEEAAYDGVA 171 (258)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC--CCCTTCEEEEE
T ss_pred CCEEEEECCCcCHHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc--CCCCCCcCEEE
Confidence 458999999999999999876 34 788999998999988877 52 23333 32221 245 7899998
Q ss_pred eccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcChH-HHHHHHHHHHhCCCee
Q 006905 538 ADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDVD-ELVKVKRIIDALKWQS 591 (626)
Q Consensus 538 ~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~~-~~~~~~~~~~~l~w~~ 591 (626)
++ --+...+|.++.|+|||||.+++..... .+.++.+.++...|..
T Consensus 172 ~~--------~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~~ 218 (258)
T 2pwy_A 172 LD--------LMEPWKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFRL 218 (258)
T ss_dssp EE--------SSCGGGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEEE
T ss_pred EC--------CcCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCce
Confidence 82 1244579999999999999999987653 5566666666655543
No 368
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.55 E-value=3.9e-08 Score=99.09 Aligned_cols=91 Identities=16% Similarity=0.160 Sum_probs=68.2
Q ss_pred ceeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHHHhcc-cceeccccccCCCCC-CccceeeeccccccC
Q 006905 470 YRNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIYERGL-VGTYTNWCEAMSTYP-RTYDLIHADSVFSLY 545 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~rgl-i~~~~~~~e~~~~yp-~t~Dlih~~~~f~~~ 545 (626)
-.+|||+|||.|.++..|++. +. +|+.+|.++.+++.+.+++- +.....-.+.++ ++ .+||+|.+..+
T Consensus 86 ~~~vLdiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~---- 157 (269)
T 1p91_A 86 ATAVLDIGCGEGYYTHAFADALPEI---TTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLP-FSDTSMDAIIRIYA---- 157 (269)
T ss_dssp CCEEEEETCTTSTTHHHHHHTCTTS---EEEEEESCHHHHHHHHHHCTTSEEEECCTTSCS-BCTTCEEEEEEESC----
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCC---eEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCC-CCCCceeEEEEeCC----
Confidence 457999999999999999886 44 78999999999999998873 222221111222 33 79999998543
Q ss_pred CCCCCHHHHHHHhhhhccCCcEEEEEcCh
Q 006905 546 KDRCETEDILLEMDRILRPEGGVIFRDDV 574 (626)
Q Consensus 546 ~~~c~~~~~l~E~dRiLRPgG~~i~~d~~ 574 (626)
...|.|+.|+|||||.+++.+..
T Consensus 158 ------~~~l~~~~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 158 ------PCKAEELARVVKPGGWVITATPG 180 (269)
T ss_dssp ------CCCHHHHHHHEEEEEEEEEEEEC
T ss_pred ------hhhHHHHHHhcCCCcEEEEEEcC
Confidence 23589999999999999997643
No 369
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.55 E-value=3.1e-08 Score=93.31 Aligned_cols=99 Identities=16% Similarity=0.176 Sum_probs=72.1
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhc----c---cceec-cccccCCCCCCccceeeeccc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERG----L---VGTYT-NWCEAMSTYPRTYDLIHADSV 541 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rg----l---i~~~~-~~~e~~~~yp~t~Dlih~~~~ 541 (626)
-.+|||+|||.|.++..|++.+. .+|+.+|.++.+++.+.++- + +.+++ |+.+.+...+..||+|.++..
T Consensus 32 ~~~vLDlGcG~G~~~~~l~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~ 109 (177)
T 2esr_A 32 GGRVLDLFAGSGGLAIEAVSRGM--SAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPP 109 (177)
T ss_dssp SCEEEEETCTTCHHHHHHHHTTC--CEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCS
T ss_pred CCeEEEeCCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCC
Confidence 45799999999999999998864 37899999999999887642 2 22333 333323334578999999766
Q ss_pred cccCCCCCCHHHHHHHhh--hhccCCcEEEEEcCh
Q 006905 542 FSLYKDRCETEDILLEMD--RILRPEGGVIFRDDV 574 (626)
Q Consensus 542 f~~~~~~c~~~~~l~E~d--RiLRPgG~~i~~d~~ 574 (626)
|.. ...+.++.++. |+|+|||.+++....
T Consensus 110 ~~~----~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 110 YAK----ETIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp SHH----HHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CCc----chHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 632 23466777776 999999999997544
No 370
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.55 E-value=3.4e-07 Score=89.88 Aligned_cols=131 Identities=11% Similarity=0.083 Sum_probs=80.7
Q ss_pred ceeEEeccCchhhHhhhhhCC---CeEEEEeccCccCcccHHHHHHhcc----cceec-ccccc--CCCCCCccceeeec
Q 006905 470 YRNILDMNAHLGGFAAALIDF---PVWVMNVVPAEAKINTLGVIYERGL----VGTYT-NWCEA--MSTYPRTYDLIHAD 539 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~---~v~~mnv~~~~~~~~~l~~~~~rgl----i~~~~-~~~e~--~~~yp~t~Dlih~~ 539 (626)
-.+|||+|||.|.++..|++. .. +|+.+|.++.+++.+.++.- +..++ |..+. +...+.+||+|.++
T Consensus 74 ~~~vLDlG~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 74 GKSVLYLGIASGTTASHVSDIVGWEG---KIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFED 150 (227)
T ss_dssp TCEEEEETTTSTTHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCEEEEEeccCCHHHHHHHHHhCCCe---EEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEEC
Confidence 458999999999999999865 13 57888999877776655431 22232 22221 12235789999985
Q ss_pred cccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh---------H--HHHHHHHHHHhCCCeeEE-eecCCCCC-CcceE
Q 006905 540 SVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV---------D--ELVKVKRIIDALKWQSQI-VDHEDGPL-EREKL 606 (626)
Q Consensus 540 ~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~---------~--~~~~~~~~~~~l~w~~~~-~~~e~~~~-~~e~~ 606 (626)
.. ..-....+|.++.|+|||||++++.-.. . ....++.+ ..- ++... .+. .+. ...-+
T Consensus 151 ~~-----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~-f~~~~~~~~--~~~~~~~~~ 221 (227)
T 1g8a_A 151 VA-----QPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVEREL-SEY-FEVIERLNL--EPYEKDHAL 221 (227)
T ss_dssp CC-----STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHH-HTT-SEEEEEEEC--TTTSSSEEE
T ss_pred CC-----CHhHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHH-Hhh-ceeeeEecc--CcccCCCEE
Confidence 43 1112234599999999999999996211 1 12455555 333 76542 232 222 23457
Q ss_pred EEEEec
Q 006905 607 LFAVKL 612 (626)
Q Consensus 607 l~~~K~ 612 (626)
++++|+
T Consensus 222 ~~~~~~ 227 (227)
T 1g8a_A 222 FVVRKT 227 (227)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 777763
No 371
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.54 E-value=1.3e-07 Score=90.76 Aligned_cols=136 Identities=13% Similarity=0.148 Sum_probs=77.6
Q ss_pred ceeEEeccCchhhHhhhhhCC-CeEEEEeccCccCcccHHHHHHhcccceec-cccccCC--------------------
Q 006905 470 YRNILDMNAHLGGFAAALIDF-PVWVMNVVPAEAKINTLGVIYERGLVGTYT-NWCEAMS-------------------- 527 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~-~v~~mnv~~~~~~~~~l~~~~~rgli~~~~-~~~e~~~-------------------- 527 (626)
-.+|||+|||+|+++.+|+++ +-....|+.+|.++ +.. ..++ ...+ |+.+ ..
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~-~~~---~~~v-~~~~~d~~~-~~~~~~~~~~~i~~~~~~~~~~ 96 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKI-MDP---IPNV-YFIQGEIGK-DNMNNIKNINYIDNMNNNSVDY 96 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSC-CCC---CTTC-EEEECCTTT-TSSCCC-----------CHHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCc-cCC---CCCc-eEEEccccc-hhhhhhccccccccccchhhHH
Confidence 367999999999999999865 20012577778774 211 1121 2222 2211 11
Q ss_pred ----CCC-CccceeeeccccccCCCC-CC-------HHHHHHHhhhhccCCcEEEEEcCh-HHHHHHHHHHHhCCCeeEE
Q 006905 528 ----TYP-RTYDLIHADSVFSLYKDR-CE-------TEDILLEMDRILRPEGGVIFRDDV-DELVKVKRIIDALKWQSQI 593 (626)
Q Consensus 528 ----~yp-~t~Dlih~~~~f~~~~~~-c~-------~~~~l~E~dRiLRPgG~~i~~d~~-~~~~~~~~~~~~l~w~~~~ 593 (626)
.++ ++||+|.|+..+...... -+ ...+|.++.|+|||||.+++..-. +....+...+...-.++.+
T Consensus 97 ~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~~~l~~~f~~v~~ 176 (201)
T 2plw_A 97 KLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLKTYLKGMFQLVHT 176 (201)
T ss_dssp HHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTTHHHHHHHHHTTEEEEEE
T ss_pred HHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCCHHHHHHHHHHHHheEEE
Confidence 035 799999998776543210 01 124789999999999999995321 2234455555443222333
Q ss_pred eecC-CCCCCcceEEEEEe
Q 006905 594 VDHE-DGPLEREKLLFAVK 611 (626)
Q Consensus 594 ~~~e-~~~~~~e~~l~~~K 611 (626)
+... ..+...|..+||++
T Consensus 177 ~~~~~~r~~s~e~y~v~~~ 195 (201)
T 2plw_A 177 TKPKASRNESREIYLVCKN 195 (201)
T ss_dssp CCCC-----CCEEEEEEEE
T ss_pred ECCcccCCcCceEEEEEec
Confidence 2222 22335688999976
No 372
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.54 E-value=1e-07 Score=100.80 Aligned_cols=95 Identities=14% Similarity=0.158 Sum_probs=72.5
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc---cceeccccccCCC--CCCccceeeecc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL---VGTYTNWCEAMST--YPRTYDLIHADS 540 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~~~~e~~~~--yp~t~Dlih~~~ 540 (626)
-.+|||+|||.|.++..+++.+. ..|+.+|.+ .++..+.++ |+ +.+++ ..+.. .|..||+|.+..
T Consensus 51 ~~~VLDiGcGtG~ls~~la~~g~--~~V~~vD~s-~~~~~a~~~~~~~~l~~~v~~~~---~d~~~~~~~~~~D~Ivs~~ 124 (348)
T 2y1w_A 51 DKIVLDVGCGSGILSFFAAQAGA--RKIYAVEAS-TMAQHAEVLVKSNNLTDRIVVIP---GKVEEVSLPEQVDIIISEP 124 (348)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC--SEEEEEECS-THHHHHHHHHHHTTCTTTEEEEE---SCTTTCCCSSCEEEEEECC
T ss_pred cCEEEEcCCCccHHHHHHHhCCC--CEEEEECCH-HHHHHHHHHHHHcCCCCcEEEEE---cchhhCCCCCceeEEEEeC
Confidence 45899999999999999988764 268888888 577766654 44 34444 23333 458999999998
Q ss_pred ccccCCCCCCHHHHHHHhhhhccCCcEEEEE
Q 006905 541 VFSLYKDRCETEDILLEMDRILRPEGGVIFR 571 (626)
Q Consensus 541 ~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~ 571 (626)
++.+.... .+...+.++.|+|||||.+++.
T Consensus 125 ~~~~~~~~-~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 125 MGYMLFNE-RMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp CBTTBTTT-SHHHHHHHGGGGEEEEEEEESC
T ss_pred chhcCChH-HHHHHHHHHHhhcCCCeEEEEe
Confidence 88776543 5678888999999999999864
No 373
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.53 E-value=8.3e-08 Score=98.57 Aligned_cols=99 Identities=12% Similarity=0.098 Sum_probs=68.2
Q ss_pred CCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHH-----------cCCCeEEEEccccc-CCCCCCCe
Q 006905 212 IRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALE-----------RGVPALIGVLAAER-LPYPSRAF 276 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~e-----------rg~~~~~~v~d~~~-Lpf~d~sF 276 (626)
..+|||||||+|.++..++++ .++++|+++..+..+...+ .. ....+.+...|... ++. +++|
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~f 153 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGF 153 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCE
T ss_pred CCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-cCCe
Confidence 568999999999999999876 5888888775444333222 10 12245666666433 233 5789
Q ss_pred eEEEeccccccccc--c--HHHHHHHHHhcccCCeEEEEEe
Q 006905 277 DMAHCSRCLIPWNQ--F--GGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 277 DlV~~~~~l~h~~~--~--~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
|+|++.... ++.. . ...++.++.++|+|||.+++..
T Consensus 154 D~Ii~d~~~-~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 154 DVIIADSTD-PVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp EEEEEECCC-CC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 999986543 3321 1 2678999999999999999974
No 374
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.53 E-value=2.3e-08 Score=102.24 Aligned_cols=134 Identities=13% Similarity=0.107 Sum_probs=76.0
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc--------cceeccccccCCCCC-Cccceeeecc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL--------VGTYTNWCEAMSTYP-RTYDLIHADS 540 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl--------i~~~~~~~e~~~~yp-~t~Dlih~~~ 540 (626)
-.+|||+|||+|+|+.+|++++ .|+++|.++ |+..+.++.. +.+++. +..+..+| .+||+|.|+.
T Consensus 75 g~~VLDlGcGtG~~s~~la~~~----~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~-~~D~~~l~~~~fD~V~sd~ 148 (265)
T 2oxt_A 75 TGRVVDLGCGRGGWSYYAASRP----HVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKS-RVDIHTLPVERTDVIMCDV 148 (265)
T ss_dssp CEEEEEESCTTSHHHHHHHTST----TEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEEC-SCCTTTSCCCCCSEEEECC
T ss_pred CCEEEEeCcCCCHHHHHHHHcC----cEEEEECch-hhhhhhhhhhhhhccCCCeEEEec-ccCHhHCCCCCCcEEEEeC
Confidence 4679999999999999998872 466777764 4322212211 112200 23444455 8999999987
Q ss_pred ccccCCCC-CCHH---HHHHHhhhhccCCc--EEEEEc----ChHHHHHHHHHHHhCCCeeEEeecCCCCCCcceEEEEE
Q 006905 541 VFSLYKDR-CETE---DILLEMDRILRPEG--GVIFRD----DVDELVKVKRIIDALKWQSQIVDHEDGPLEREKLLFAV 610 (626)
Q Consensus 541 ~f~~~~~~-c~~~---~~l~E~dRiLRPgG--~~i~~d----~~~~~~~~~~~~~~l~w~~~~~~~e~~~~~~e~~l~~~ 610 (626)
. .+..+. -+.. .+|.++.|+||||| .|++.. ..+++..++.+.+.+. ...+...-.-....|..+||.
T Consensus 149 ~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~~~~~~~~~~l~~l~~~f~-~v~~~k~~sR~~s~E~y~v~~ 226 (265)
T 2oxt_A 149 G-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLCPYSVEVMERLSVMQRKWG-GGLVRNPYSRNSTHEMYFTSR 226 (265)
T ss_dssp C-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESCTTSHHHHHHHHHHHHHHC-CEEECCTTSCTTCCCEEEESS
T ss_pred c-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCCCCChhHHHHHHHHHHHcC-CEEEEEecccCCCccEEEEec
Confidence 6 222211 0001 27899999999999 999863 2322344444333322 233332222233467777764
Q ss_pred e
Q 006905 611 K 611 (626)
Q Consensus 611 K 611 (626)
+
T Consensus 227 ~ 227 (265)
T 2oxt_A 227 A 227 (265)
T ss_dssp C
T ss_pred C
Confidence 3
No 375
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.53 E-value=1.8e-08 Score=93.63 Aligned_cols=97 Identities=10% Similarity=0.071 Sum_probs=70.4
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhc----c-cceec-cccccCCCCC---Cccceeeecc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERG----L-VGTYT-NWCEAMSTYP---RTYDLIHADS 540 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rg----l-i~~~~-~~~e~~~~yp---~t~Dlih~~~ 540 (626)
-.+|||+|||.|.++..|++.+. +|+.+|.++.+++.+.++- + +.+++ |+.+.....+ .+||+|.++.
T Consensus 42 ~~~vLD~GcG~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 118 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAASEGW---EAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp CCEEEEETCSSCHHHHHHHHTTC---EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCeEEEeCCCcCHHHHHHHHCCC---eEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECC
Confidence 35799999999999999998875 4999999999998887642 2 23333 2222122222 3899999988
Q ss_pred ccccCCCCCCHHHHHHHhh--hhccCCcEEEEEcCh
Q 006905 541 VFSLYKDRCETEDILLEMD--RILRPEGGVIFRDDV 574 (626)
Q Consensus 541 ~f~~~~~~c~~~~~l~E~d--RiLRPgG~~i~~d~~ 574 (626)
.|. . ..+.++.++. |+|||||.+++....
T Consensus 119 ~~~--~---~~~~~~~~~~~~~~L~~gG~~~~~~~~ 149 (171)
T 1ws6_A 119 PYA--M---DLAALFGELLASGLVEAGGLYVLQHPK 149 (171)
T ss_dssp CTT--S---CTTHHHHHHHHHTCEEEEEEEEEEEET
T ss_pred CCc--h---hHHHHHHHHHhhcccCCCcEEEEEeCC
Confidence 876 2 3356667776 999999999997543
No 376
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.53 E-value=1.8e-07 Score=93.46 Aligned_cols=105 Identities=16% Similarity=0.224 Sum_probs=79.9
Q ss_pred ceeEEeccCchhhHhhhhhCC---CeEEEEeccCccCcccHHHHHHh----cc---cceec-cccccCCCCC-Cccceee
Q 006905 470 YRNILDMNAHLGGFAAALIDF---PVWVMNVVPAEAKINTLGVIYER----GL---VGTYT-NWCEAMSTYP-RTYDLIH 537 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~---~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~-~~~e~~~~yp-~t~Dlih 537 (626)
-.+|||+|||.|.++.+|++. +. .|+.+|.++.+++.+.++ |+ +.+.+ |..+ .+| .+||+|.
T Consensus 94 ~~~vldiG~G~G~~~~~l~~~~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~~~~~D~v~ 167 (255)
T 3mb5_A 94 GDFIVEAGVGSGALTLFLANIVGPEG---RVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYE---GIEEENVDHVI 167 (255)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTS---EEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGG---CCCCCSEEEEE
T ss_pred CCEEEEecCCchHHHHHHHHHhCCCe---EEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhh---ccCCCCcCEEE
Confidence 567999999999999999876 44 688899998999988876 54 23333 3333 255 7899998
Q ss_pred eccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcC-hHHHHHHHHHHHhCC
Q 006905 538 ADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDD-VDELVKVKRIIDALK 588 (626)
Q Consensus 538 ~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~-~~~~~~~~~~~~~l~ 588 (626)
+ +--+...+|.++.|+|||||.+++... .+...++.+.++...
T Consensus 168 ~--------~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g 211 (255)
T 3mb5_A 168 L--------DLPQPERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFK 211 (255)
T ss_dssp E--------CSSCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTG
T ss_pred E--------CCCCHHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 8 223446789999999999999998764 556677777777665
No 377
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.52 E-value=2.1e-07 Score=93.73 Aligned_cols=101 Identities=14% Similarity=0.059 Sum_probs=75.0
Q ss_pred CCCCEEEEeCCCCchHHHHHhh-CCcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCCCeeEEEeccccccc
Q 006905 210 GSIRTAIDTGCGVASWGAYLLS-RNIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSRAFDMAHCSRCLIPW 288 (626)
Q Consensus 210 ~~~~~VLDIGCGtG~~a~~La~-~~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h~ 288 (626)
+...+|||||||.|.++..+.. ..++++|+++.++.-... .+...+.+..+.+.|....+.+. +||+|++.-++++.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~~~~~y~a~DId~~~i~~ar~-~~~~~g~~~~~~v~D~~~~~~~~-~~DvvLllk~lh~L 181 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYERGIASVWGCDIHQGLGDVITP-FAREKDWDFTFALQDVLCAPPAE-AGDLALIFKLLPLL 181 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHTTCSEEEEEESBHHHHHHHHH-HHHHTTCEEEEEECCTTTSCCCC-BCSEEEEESCHHHH
T ss_pred CCCCeEEEecCCccHHHHHhccCCeEEEEeCCHHHHHHHHH-HHHhcCCCceEEEeecccCCCCC-CcchHHHHHHHHHh
Confidence 4467999999999999988763 489999998865543332 34455777888888877777554 89999999888666
Q ss_pred cccHHHHHHHHHhcccCCeEEEEE
Q 006905 289 NQFGGIYLIEVDRVLRPGGYWILS 312 (626)
Q Consensus 289 ~~~~~~~L~Ei~RvLKPGG~lvis 312 (626)
.........++.+.|+++|.+|-.
T Consensus 182 E~q~~~~~~~ll~aL~~~~vvVsf 205 (253)
T 3frh_A 182 EREQAGSAMALLQSLNTPRMAVSF 205 (253)
T ss_dssp HHHSTTHHHHHHHHCBCSEEEEEE
T ss_pred hhhchhhHHHHHHHhcCCCEEEEc
Confidence 544444455899999999776553
No 378
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.52 E-value=1.7e-07 Score=92.72 Aligned_cols=134 Identities=12% Similarity=0.058 Sum_probs=82.3
Q ss_pred ceeEEeccCchhhHhhhhhCC-CeEEEEeccCccCcccHHHHHHhcc----cceec-cccccC--CCCCCccceeeeccc
Q 006905 470 YRNILDMNAHLGGFAAALIDF-PVWVMNVVPAEAKINTLGVIYERGL----VGTYT-NWCEAM--STYPRTYDLIHADSV 541 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~-~v~~mnv~~~~~~~~~l~~~~~rgl----i~~~~-~~~e~~--~~yp~t~Dlih~~~~ 541 (626)
-.+|||+|||+|.++..|++. + .-.|+.+|.++.++..+.++.- +...+ |..+.. ..++.+||+|...
T Consensus 75 ~~~VLDlGcG~G~~~~~la~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~-- 150 (230)
T 1fbn_A 75 DSKILYLGASAGTTPSHVADIAD--KGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYED-- 150 (230)
T ss_dssp TCEEEEESCCSSHHHHHHHHHTT--TSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEEEC--
T ss_pred CCEEEEEcccCCHHHHHHHHHcC--CcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEEEe--
Confidence 457999999999999999876 3 1268999999999988776532 12222 211110 1233789998731
Q ss_pred cccCCCCCCHHHHHHHhhhhccCCcEEEEE----cCh-----H--HHHHHHHHHHhCCCeeEEeecCCCCC-CcceEEEE
Q 006905 542 FSLYKDRCETEDILLEMDRILRPEGGVIFR----DDV-----D--ELVKVKRIIDALKWQSQIVDHEDGPL-EREKLLFA 609 (626)
Q Consensus 542 f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~----d~~-----~--~~~~~~~~~~~l~w~~~~~~~e~~~~-~~e~~l~~ 609 (626)
....-..+.+|.++.|+|||||.+++. ... . ....++ ++....++..-.. +-.+. ..-.++++
T Consensus 151 ---~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~-~~~~~~~~~~~v~~ 225 (230)
T 1fbn_A 151 ---VAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEV-DIEPFEKDHVMFVG 225 (230)
T ss_dssp ---CCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEE-ECTTTSTTEEEEEE
T ss_pred ---cCChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEE-ccCCCccceEEEEE
Confidence 112112367899999999999999994 110 1 124555 5555556544222 11222 23467788
Q ss_pred Eec
Q 006905 610 VKL 612 (626)
Q Consensus 610 ~K~ 612 (626)
+|+
T Consensus 226 ~k~ 228 (230)
T 1fbn_A 226 IWE 228 (230)
T ss_dssp EEC
T ss_pred EeC
Confidence 773
No 379
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.52 E-value=1.8e-07 Score=96.28 Aligned_cols=110 Identities=18% Similarity=0.155 Sum_probs=72.2
Q ss_pred HHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccccCC
Q 006905 195 DAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAERLP 270 (626)
Q Consensus 195 ~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~Lp 270 (626)
...++.+.+.+.... +.+|||||||+|.++..|+++ .++++|+++.++..+..+ ....+. .+.+..+|+..++
T Consensus 14 ~~i~~~i~~~~~~~~--~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~~v~~~~~D~~~~~ 90 (285)
T 1zq9_A 14 PLIINSIIDKAALRP--TDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKR-VQGTPVASKLQVLVGDVLKTD 90 (285)
T ss_dssp HHHHHHHHHHTCCCT--TCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHH-HTTSTTGGGEEEEESCTTTSC
T ss_pred HHHHHHHHHhcCCCC--CCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHH-HHhcCCCCceEEEEcceeccc
Confidence 345566666665443 458999999999999999886 688888877544332222 212222 4677788887777
Q ss_pred CCCCCeeEEEeccccccccccH-HHHH--------------HHH--HhcccCCeEEE
Q 006905 271 YPSRAFDMAHCSRCLIPWNQFG-GIYL--------------IEV--DRVLRPGGYWI 310 (626)
Q Consensus 271 f~d~sFDlV~~~~~l~h~~~~~-~~~L--------------~Ei--~RvLKPGG~lv 310 (626)
++ +||+|+++..+ ++..+. ..++ +|+ .++|+|||.++
T Consensus 91 ~~--~fD~vv~nlpy-~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 91 LP--FFDTCVANLPY-QISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp CC--CCSEEEEECCG-GGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred ch--hhcEEEEecCc-ccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 65 79999998765 444322 1222 333 36899998863
No 380
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.52 E-value=4.2e-07 Score=99.50 Aligned_cols=103 Identities=15% Similarity=0.111 Sum_probs=72.0
Q ss_pred CCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcCC-CeEEEEcccccCC--CCCCCeeEEEec-
Q 006905 212 IRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERGV-PALIGVLAAERLP--YPSRAFDMAHCS- 282 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg~-~~~~~v~d~~~Lp--f~d~sFDlV~~~- 282 (626)
+.+|||+|||+|..+..|++. .++++|+++..+.... +.+...|+ .+.+...|...++ +++++||+|++.
T Consensus 260 g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~-~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D~ 338 (450)
T 2yxl_A 260 GETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLK-DFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLLDA 338 (450)
T ss_dssp TCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHH-HHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEEEC
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHH-HHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEEcC
Confidence 458999999999999988873 5888888775444332 33334465 4667777777766 555789999962
Q ss_pred -----cccccccc--------c-------HHHHHHHHHhcccCCeEEEEEeCC
Q 006905 283 -----RCLIPWNQ--------F-------GGIYLIEVDRVLRPGGYWILSGPP 315 (626)
Q Consensus 283 -----~~l~h~~~--------~-------~~~~L~Ei~RvLKPGG~lvis~pp 315 (626)
..+.+.++ + +..+|.++.++|||||.+++++..
T Consensus 339 Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs 391 (450)
T 2yxl_A 339 PCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCS 391 (450)
T ss_dssp CCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred CCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 12211111 0 146899999999999999998653
No 381
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.52 E-value=2e-07 Score=93.06 Aligned_cols=97 Identities=13% Similarity=0.076 Sum_probs=69.1
Q ss_pred CCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcCCC--eEEEEccccc-CC-C-----CCCCee
Q 006905 212 IRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERGVP--ALIGVLAAER-LP-Y-----PSRAFD 277 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg~~--~~~~v~d~~~-Lp-f-----~d~sFD 277 (626)
..+|||||||+|..+..|++. .++++|+++..+..+. +...+.+.. +.+..+|+.. ++ + ++++||
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~-~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 149 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGL-PFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYD 149 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHH-HHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEE
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-HHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcC
Confidence 458999999999999888764 6888888775444333 233344553 6677777443 22 2 257899
Q ss_pred EEEeccccccccccHHHHHHHHHhcccCCeEEEEEe
Q 006905 278 MAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 278 lV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
+|++.. +......++.++.++|||||++++..
T Consensus 150 ~I~~d~----~~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 150 FGFVDA----DKPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEECS----CGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEECC----chHHHHHHHHHHHHhcCCCeEEEEec
Confidence 999864 23345789999999999999999874
No 382
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.51 E-value=3.4e-07 Score=90.70 Aligned_cols=132 Identities=11% Similarity=0.099 Sum_probs=88.1
Q ss_pred eeEEeccCchhhHhhhhhCC---CeEEEEeccCccCcccHHHHHHh----cc----cceec-cccccCCCC-CCccceee
Q 006905 471 RNILDMNAHLGGFAAALIDF---PVWVMNVVPAEAKINTLGVIYER----GL----VGTYT-NWCEAMSTY-PRTYDLIH 537 (626)
Q Consensus 471 r~vlD~g~g~G~faa~l~~~---~v~~mnv~~~~~~~~~l~~~~~r----gl----i~~~~-~~~e~~~~y-p~t~Dlih 537 (626)
.+|||+|||.|..+.+|++. +. .|+.+|.++.+++++.++ |+ |.+.+ |..+.+..+ +.+||+|.
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~ 134 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNT---TLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVF 134 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTS---EEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEE
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEE
Confidence 38999999999999999763 33 688999998998887654 33 23333 222333445 48999998
Q ss_pred eccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh------------HHHHHHHHHHHhCCCeeEEeecCCCCCCcce
Q 006905 538 ADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV------------DELVKVKRIIDALKWQSQIVDHEDGPLEREK 605 (626)
Q Consensus 538 ~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~------------~~~~~~~~~~~~l~w~~~~~~~e~~~~~~e~ 605 (626)
++.. .-+...++.++.|+|||||.+++.+.. .....++++.+.++++-.+.. .-=| ..+.
T Consensus 135 ~d~~------~~~~~~~l~~~~~~LkpGG~lv~dn~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~lp-~gdG 206 (221)
T 3dr5_A 135 GQVS------PMDLKALVDAAWPLLRRGGALVLADALLDGTIADQTRKDRDTQAARDADEYIRSIEGAHV-ARLP-LGAG 206 (221)
T ss_dssp ECCC------TTTHHHHHHHHHHHEEEEEEEEETTTTGGGTCSCSSCCCHHHHHHHHHHHHHTTCTTEEE-EEES-STTC
T ss_pred EcCc------HHHHHHHHHHHHHHcCCCcEEEEeCCCCCCcCCCCCCCChHHHHHHHHHHHHhhCCCeeE-EEee-ccch
Confidence 8542 235577999999999999999995321 123456666666666532111 0012 3467
Q ss_pred EEEEEecc
Q 006905 606 LLFAVKLY 613 (626)
Q Consensus 606 ~l~~~K~~ 613 (626)
+++++|..
T Consensus 207 l~~~~~~~ 214 (221)
T 3dr5_A 207 LTVVTKAL 214 (221)
T ss_dssp EEEEEECC
T ss_pred HHHHHHHH
Confidence 99999875
No 383
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.50 E-value=8.3e-08 Score=101.15 Aligned_cols=139 Identities=13% Similarity=0.158 Sum_probs=89.3
Q ss_pred hhhcCCCCCceeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHH--HHHhcc---cceeccccccCCCCCCcc
Q 006905 461 NNQLGQSGRYRNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGV--IYERGL---VGTYTNWCEAMSTYPRTY 533 (626)
Q Consensus 461 ~~~~~~~~~~r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~--~~~rgl---i~~~~~~~e~~~~yp~t~ 533 (626)
+..+.. ....+|||+|||.|.++..|++. ++ .++.+|.+ .++.. +.+.|+ +.... ...+...| +|
T Consensus 177 ~~~~~~-~~~~~vLDvG~G~G~~~~~l~~~~p~~---~~~~~D~~-~~~~~~~~~~~~~~~~v~~~~--~d~~~~~p-~~ 248 (348)
T 3lst_A 177 ARAGDF-PATGTVADVGGGRGGFLLTVLREHPGL---QGVLLDRA-EVVARHRLDAPDVAGRWKVVE--GDFLREVP-HA 248 (348)
T ss_dssp HHHSCC-CSSEEEEEETCTTSHHHHHHHHHCTTE---EEEEEECH-HHHTTCCCCCGGGTTSEEEEE--CCTTTCCC-CC
T ss_pred HHhCCc-cCCceEEEECCccCHHHHHHHHHCCCC---EEEEecCH-HHhhcccccccCCCCCeEEEe--cCCCCCCC-CC
Confidence 333444 56789999999999999999874 33 55667765 33330 001133 22222 12225677 99
Q ss_pred ceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh-------------------------HHHHHHHHHHHhCC
Q 006905 534 DLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV-------------------------DELVKVKRIIDALK 588 (626)
Q Consensus 534 Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~-------------------------~~~~~~~~~~~~l~ 588 (626)
|+|.+..++.++.+. +...+|.++.|+|||||+++|.|.. -....++++++.-.
T Consensus 249 D~v~~~~vlh~~~d~-~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aG 327 (348)
T 3lst_A 249 DVHVLKRILHNWGDE-DSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAG 327 (348)
T ss_dssp SEEEEESCGGGSCHH-HHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTT
T ss_pred cEEEEehhccCCCHH-HHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCC
Confidence 999999999887742 3358999999999999999997631 01445667777777
Q ss_pred CeeEEeecCCCCCCcceEEEEEe
Q 006905 589 WQSQIVDHEDGPLEREKLLFAVK 611 (626)
Q Consensus 589 w~~~~~~~e~~~~~~e~~l~~~K 611 (626)
++..-+... + ....|+.++|
T Consensus 328 f~~~~~~~~-~--~~~~vie~~p 347 (348)
T 3lst_A 328 LRLDRVVGT-S--SVMSIAVGVP 347 (348)
T ss_dssp EEEEEEEEC-S--SSCEEEEEEE
T ss_pred CceEEEEEC-C--CCcEEEEEEe
Confidence 776544332 1 2345665554
No 384
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.50 E-value=1.2e-07 Score=91.97 Aligned_cols=131 Identities=12% Similarity=0.115 Sum_probs=77.8
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcccceeccccccCCCCC--------------Cccce
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGLVGTYTNWCEAMSTYP--------------RTYDL 535 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgli~~~~~~~e~~~~yp--------------~t~Dl 535 (626)
-.+|||+|||+|+++.+|++++. .|+++|.++.. . ..++ .++. .++...+ .+||+
T Consensus 26 g~~VLDlG~G~G~~s~~la~~~~---~V~gvD~~~~~-~---~~~v-~~~~---~D~~~~~~~~~~~~~~~~~~~~~~D~ 94 (191)
T 3dou_A 26 GDAVIEIGSSPGGWTQVLNSLAR---KIISIDLQEME-E---IAGV-RFIR---CDIFKETIFDDIDRALREEGIEKVDD 94 (191)
T ss_dssp TCEEEEESCTTCHHHHHHTTTCS---EEEEEESSCCC-C---CTTC-EEEE---CCTTSSSHHHHHHHHHHHHTCSSEEE
T ss_pred CCEEEEEeecCCHHHHHHHHcCC---cEEEEeccccc-c---CCCe-EEEE---ccccCHHHHHHHHHHhhcccCCcceE
Confidence 46899999999999999999844 67888887432 1 0122 2222 2222221 48999
Q ss_pred eeeccccccCCCC--------CCHHHHHHHhhhhccCCcEEEEEcC-hHHHHHHHHHHHhCCCee-EEeecC-CCCCCcc
Q 006905 536 IHADSVFSLYKDR--------CETEDILLEMDRILRPEGGVIFRDD-VDELVKVKRIIDALKWQS-QIVDHE-DGPLERE 604 (626)
Q Consensus 536 ih~~~~f~~~~~~--------c~~~~~l~E~dRiLRPgG~~i~~d~-~~~~~~~~~~~~~l~w~~-~~~~~e-~~~~~~e 604 (626)
|.++......... ...+.+|.++.|+|||||.|++..- .+....+...++.. +.. .++... .-+...|
T Consensus 95 Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~~~l~~~-F~~v~~~kP~asR~~s~E 173 (191)
T 3dou_A 95 VVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFIAIWRKN-FSSYKISKPPASRGSSSE 173 (191)
T ss_dssp EEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHHHHHHHGGG-EEEEEEECC------CCE
T ss_pred EecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHHHHHHHHHh-cCEEEEECCCCccCCCce
Confidence 9997654322211 1134688999999999999998532 12234455555543 332 332222 2234578
Q ss_pred eEEEEEec
Q 006905 605 KLLFAVKL 612 (626)
Q Consensus 605 ~~l~~~K~ 612 (626)
..+||++.
T Consensus 174 ~y~v~~~~ 181 (191)
T 3dou_A 174 IYIMFFGF 181 (191)
T ss_dssp EEEEEEEE
T ss_pred EEEEEeee
Confidence 99999763
No 385
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.49 E-value=3.3e-07 Score=98.41 Aligned_cols=104 Identities=11% Similarity=0.012 Sum_probs=74.3
Q ss_pred CCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCC---CeEEEEccccc-CCC---CCCCeeEEEe
Q 006905 212 IRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGV---PALIGVLAAER-LPY---PSRAFDMAHC 281 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~---~~~~~v~d~~~-Lpf---~d~sFDlV~~ 281 (626)
+.+|||+|||+|.++..++.. .|+++|+++..+..+.. .+..+++ .+.+..+|+.. ++. ...+||+|++
T Consensus 213 ~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~-N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~ 291 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLA-HFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIII 291 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHH-HHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHH-HHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEE
Confidence 458999999999999999884 58999999977765544 3445555 46788878544 331 2458999998
Q ss_pred ccccc-----cc---cccHHHHHHHHHhcccCCeEEEEEeCCC
Q 006905 282 SRCLI-----PW---NQFGGIYLIEVDRVLRPGGYWILSGPPI 316 (626)
Q Consensus 282 ~~~l~-----h~---~~~~~~~L~Ei~RvLKPGG~lvis~pp~ 316 (626)
..... .. ......++.++.++|+|||.++++..+.
T Consensus 292 DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 292 DPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp CCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 65432 11 1112457788899999999999987543
No 386
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.49 E-value=8.3e-08 Score=101.19 Aligned_cols=130 Identities=11% Similarity=0.138 Sum_probs=86.4
Q ss_pred eeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----ccc-ceeccccccCCCC-CCccceeeecccccc
Q 006905 471 RNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GLV-GTYTNWCEAMSTY-PRTYDLIHADSVFSL 544 (626)
Q Consensus 471 r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gli-~~~~~~~e~~~~y-p~t~Dlih~~~~f~~ 544 (626)
.+|||+|||.|.++..|++.+- ..+|+.+|.++.+++.+.++ |+- .+++ ..+..+ +.+||+|.++..|.+
T Consensus 198 ~~VLDlGcG~G~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~---~d~~~~~~~~fD~Iv~~~~~~~ 273 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFARHSP-KIRLTLCDVSAPAVEASRATLAANGVEGEVFA---SNVFSEVKGRFDMIISNPPFHD 273 (343)
T ss_dssp SBCCBTTCTTSHHHHHHHHHCT-TCBCEEEESBHHHHHHHHHHHHHTTCCCEEEE---CSTTTTCCSCEEEEEECCCCCS
T ss_pred CeEEEecCccCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCCCCEEEE---ccccccccCCeeEEEECCCccc
Confidence 4799999999999999987631 01688999998899888775 331 1222 223333 589999999998875
Q ss_pred CC--CCCCHHHHHHHhhhhccCCcEEEEEcCh--HHHHHHHHHHHhCCCeeEEeecCCCCCCcceEEEEEec
Q 006905 545 YK--DRCETEDILLEMDRILRPEGGVIFRDDV--DELVKVKRIIDALKWQSQIVDHEDGPLEREKLLFAVKL 612 (626)
Q Consensus 545 ~~--~~c~~~~~l~E~dRiLRPgG~~i~~d~~--~~~~~~~~~~~~l~w~~~~~~~e~~~~~~e~~l~~~K~ 612 (626)
.. +..+.+.+|.++.|+|||||.+++.... .....++++... + .....+ .+-+|+.++|.
T Consensus 274 g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~l~~~f~~--~--~~~~~~----~gf~v~~~~k~ 337 (343)
T 2pjd_A 274 GMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGF--H--EVIAQT----GRFKVYRAIMT 337 (343)
T ss_dssp SSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETTSSHHHHHHHHHSC--C--EEEEEC----SSEEEEEEEC-
T ss_pred CccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcHHHHHHhcCc--e--EEEeeC----CCEEEEEEEeC
Confidence 32 1124567999999999999999997543 233444554442 2 222222 35677777663
No 387
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.49 E-value=9.3e-08 Score=90.28 Aligned_cols=99 Identities=20% Similarity=0.235 Sum_probs=72.2
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc---cceec-cccccCCCC---CCccceeee
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL---VGTYT-NWCEAMSTY---PRTYDLIHA 538 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~-~~~e~~~~y---p~t~Dlih~ 538 (626)
-.+|||+|||.|.++.++++.+. .+|+.+|.++.+++.+.++ |+ +.+++ |+.+..... +.+||+|.+
T Consensus 45 ~~~vLD~GcG~G~~~~~~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 122 (187)
T 2fhp_A 45 GGMALDLYSGSGGLAIEAVSRGM--DKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLL 122 (187)
T ss_dssp SCEEEETTCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCEEEeCCccCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEE
Confidence 45899999999999998887763 3789999998999877664 32 33443 333322212 478999999
Q ss_pred ccccccCCCCCCHHHHHHHh--hhhccCCcEEEEEcCh
Q 006905 539 DSVFSLYKDRCETEDILLEM--DRILRPEGGVIFRDDV 574 (626)
Q Consensus 539 ~~~f~~~~~~c~~~~~l~E~--dRiLRPgG~~i~~d~~ 574 (626)
+..|.. -..+.++.++ .|+|+|||.+++....
T Consensus 123 ~~~~~~----~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 123 DPPYAK----QEIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp CCCGGG----CCHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CCCCCc----hhHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 877652 2457777777 9999999999997543
No 388
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.49 E-value=2.1e-07 Score=91.23 Aligned_cols=128 Identities=16% Similarity=0.111 Sum_probs=86.4
Q ss_pred ceeEEeccCchhhHhhhhhCC---CeEEEEeccCccCcccHHHHHHh----cc---cceec-cccccCCCCC-----Ccc
Q 006905 470 YRNILDMNAHLGGFAAALIDF---PVWVMNVVPAEAKINTLGVIYER----GL---VGTYT-NWCEAMSTYP-----RTY 533 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~---~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~-~~~e~~~~yp-----~t~ 533 (626)
-.+|||+|||.|.++.+|++. +. +|+.+|.++.+++.+.++ |+ +.+++ |..+.+..++ .+|
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~ 146 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPADG---RVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF 146 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTC---EEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 458999999999999999875 33 788899988899888765 44 33333 2222222222 689
Q ss_pred ceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh------------HHHHHHHHH----HHhCCCeeEEeecC
Q 006905 534 DLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV------------DELVKVKRI----IDALKWQSQIVDHE 597 (626)
Q Consensus 534 Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~------------~~~~~~~~~----~~~l~w~~~~~~~e 597 (626)
|+|.++.. ......++.++.|+|||||.+++.+.. .....++++ ...=++++.+...
T Consensus 147 D~v~~d~~------~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~- 219 (229)
T 2avd_A 147 DVAVVDAD------KENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISLLPL- 219 (229)
T ss_dssp EEEEECSC------STTHHHHHHHHHHHEEEEEEEEEECCSGGGGGGSCCTTCHHHHHHHHHHHHHHHCTTEEEEEECS-
T ss_pred cEEEECCC------HHHHHHHHHHHHHHcCCCeEEEEECCCcCCcccCcccCChHHHHHHHHHHHHhhCCCEEEEEEec-
Confidence 99998543 345678999999999999999995421 223333433 3444566666543
Q ss_pred CCCCCcceEEEEEec
Q 006905 598 DGPLEREKLLFAVKL 612 (626)
Q Consensus 598 ~~~~~~e~~l~~~K~ 612 (626)
.+.+++++|.
T Consensus 220 -----~dGl~~~~k~ 229 (229)
T 2avd_A 220 -----GDGLTLAFKI 229 (229)
T ss_dssp -----TTCEEEEEEC
T ss_pred -----CCceEEEEEC
Confidence 3568888873
No 389
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.49 E-value=6.8e-07 Score=89.52 Aligned_cols=98 Identities=13% Similarity=-0.027 Sum_probs=72.0
Q ss_pred CCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccccCCCCCCCeeEEEecccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAERLPYPSRAFDMAHCSRCL 285 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~Lpf~d~sFDlV~~~~~l 285 (626)
+.+|||||||+|.++..|++. .|+++|+++..+..+.. .+...++ .+.+..+|......+++.||+|+.....
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~-N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGmG 100 (230)
T 3lec_A 22 GARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALK-NVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGMG 100 (230)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHH-HHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEEC
T ss_pred CCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCcEEEEECchhhccccccccCEEEEeCCc
Confidence 358999999999999999986 48899998866554443 3445565 3777777866555454579998865432
Q ss_pred ccccccHHHHHHHHHhcccCCeEEEEEe
Q 006905 286 IPWNQFGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 286 ~h~~~~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
.+-...+|.+..+.|+++|+|+++.
T Consensus 101 ---g~lI~~IL~~~~~~l~~~~~lIlqp 125 (230)
T 3lec_A 101 ---GRLIADILNNDIDKLQHVKTLVLQP 125 (230)
T ss_dssp ---HHHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred ---hHHHHHHHHHHHHHhCcCCEEEEEC
Confidence 1112678889999999999999985
No 390
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.48 E-value=2.9e-07 Score=90.94 Aligned_cols=133 Identities=14% Similarity=0.119 Sum_probs=79.2
Q ss_pred ceeEEeccCchhhHhhhhhCC--CeEEEEeccCccCccc----HHHHHHhcccceec-ccccc--CCCCCCccceeeecc
Q 006905 470 YRNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINT----LGVIYERGLVGTYT-NWCEA--MSTYPRTYDLIHADS 540 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~----l~~~~~rgli~~~~-~~~e~--~~~yp~t~Dlih~~~ 540 (626)
-.+|||+|||+|.++..|++. +- ..|+.+|.++.+ ++.+.++.-+..++ |..+. +...+.+||+|.++.
T Consensus 78 ~~~vLDlG~G~G~~~~~la~~~g~~--~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~ 155 (233)
T 2ipx_A 78 GAKVLYLGAASGTTVSHVSDIVGPD--GLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADV 155 (233)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTT--CEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEECC
T ss_pred CCEEEEEcccCCHHHHHHHHHhCCC--cEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEcC
Confidence 458999999999999999876 21 167888998664 44444432233333 22221 111237999999954
Q ss_pred ccccCCCCCCH-HHHHHHhhhhccCCcEEEEEcChH----------HHHHHHHHHHhCCCeeEE-eecCCCCCCcceEEE
Q 006905 541 VFSLYKDRCET-EDILLEMDRILRPEGGVIFRDDVD----------ELVKVKRIIDALKWQSQI-VDHEDGPLEREKLLF 608 (626)
Q Consensus 541 ~f~~~~~~c~~-~~~l~E~dRiLRPgG~~i~~d~~~----------~~~~~~~~~~~l~w~~~~-~~~e~~~~~~e~~l~ 608 (626)
. ..+. ..++.++.|+|||||.+++.-... ...+-.+++....|+... .+.+.-+ ..--+++
T Consensus 156 ~------~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~-~~~~~v~ 228 (233)
T 2ipx_A 156 A------QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLEPYE-RDHAVVV 228 (233)
T ss_dssp C------CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEEEEECTTTS-SSEEEEE
T ss_pred C------CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEEEEecCCcc-CCcEEEE
Confidence 3 1222 446788999999999999963321 122223555666676653 3333222 2345666
Q ss_pred EEe
Q 006905 609 AVK 611 (626)
Q Consensus 609 ~~K 611 (626)
++|
T Consensus 229 ~~~ 231 (233)
T 2ipx_A 229 GVY 231 (233)
T ss_dssp EEE
T ss_pred EEe
Confidence 665
No 391
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.48 E-value=1.3e-07 Score=93.01 Aligned_cols=92 Identities=13% Similarity=0.091 Sum_probs=70.1
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc----cceec-cccccCCCCCCccceeeecccccc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL----VGTYT-NWCEAMSTYPRTYDLIHADSVFSL 544 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl----i~~~~-~~~e~~~~yp~t~Dlih~~~~f~~ 544 (626)
-.+|||+|||.|.++..|++.+ .+|+.+|.++.+++.+.++.- +.+.+ |..+.+. -+.+||+|.+..++.+
T Consensus 71 ~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~~~~~ 146 (231)
T 1vbf_A 71 GQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE-EEKPYDRVVVWATAPT 146 (231)
T ss_dssp TCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG-GGCCEEEEEESSBBSS
T ss_pred CCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccc-cCCCccEEEECCcHHH
Confidence 4589999999999999999876 388999999999999988742 23333 2222111 1289999999888876
Q ss_pred CCCCCCHHHHHHHhhhhccCCcEEEEEcCh
Q 006905 545 YKDRCETEDILLEMDRILRPEGGVIFRDDV 574 (626)
Q Consensus 545 ~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~ 574 (626)
.. .++.|+|||||.+++....
T Consensus 147 ~~---------~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 147 LL---------CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp CC---------HHHHHTEEEEEEEEEEECS
T ss_pred HH---------HHHHHHcCCCcEEEEEEcC
Confidence 54 4789999999999998653
No 392
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.47 E-value=5.4e-07 Score=98.00 Aligned_cols=111 Identities=9% Similarity=0.037 Sum_probs=78.4
Q ss_pred HHHhhccCCCCCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCC--CCCC
Q 006905 201 IGKLINLNDGSIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLP--YPSR 274 (626)
Q Consensus 201 L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lp--f~d~ 274 (626)
+..++... ++.+|||+|||+|..+..+++. .++++|+++..+.... +.+...++.+.+...|...++ ++++
T Consensus 238 ~~~~l~~~--~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~-~~~~~~g~~~~~~~~D~~~~~~~~~~~ 314 (429)
T 1sqg_A 238 CMTWLAPQ--NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVY-DNLKRLGMKATVKQGDGRYPSQWCGEQ 314 (429)
T ss_dssp HHHHHCCC--TTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHH-HHHHHTTCCCEEEECCTTCTHHHHTTC
T ss_pred HHHHcCCC--CcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HHHHHcCCCeEEEeCchhhchhhcccC
Confidence 34444433 3559999999999999998874 5899999886665443 344455777777778877765 5667
Q ss_pred CeeEEEecc------ccccccc---------------cHHHHHHHHHhcccCCeEEEEEeC
Q 006905 275 AFDMAHCSR------CLIPWNQ---------------FGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 275 sFDlV~~~~------~l~h~~~---------------~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+||+|++.. .+.+-++ ....+|.++.++|||||++++++.
T Consensus 315 ~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystc 375 (429)
T 1sqg_A 315 QFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC 375 (429)
T ss_dssp CEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEES
T ss_pred CCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 899999632 1211111 013789999999999999999864
No 393
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.47 E-value=1.3e-07 Score=93.39 Aligned_cols=94 Identities=14% Similarity=0.185 Sum_probs=71.5
Q ss_pred ceeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHHHh----cc---cceec-cccccCCCC--CCccceee
Q 006905 470 YRNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIYER----GL---VGTYT-NWCEAMSTY--PRTYDLIH 537 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~-~~~e~~~~y--p~t~Dlih 537 (626)
-.+|||+|||.|.++..|++. +. +|+.+|.++.+++.+.++ |+ +.+.+ |..+.+... +.+||+|.
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 131 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQALPEA---TIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLF 131 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHCTTC---EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEE
T ss_pred CCEEEEecCCCcHHHHHHHHHCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEE
Confidence 357999999999999999876 33 789999998999988877 44 33333 222222222 47899999
Q ss_pred eccccccCCCCCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 538 ADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 538 ~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
++..+. +...+|.++.|+|||||.+++.+
T Consensus 132 ~~~~~~------~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 132 IDAAKG------QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EEGGGS------CHHHHHHHHGGGEEEEEEEEEET
T ss_pred ECCCHH------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 866543 56889999999999999999975
No 394
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.46 E-value=7.3e-08 Score=93.86 Aligned_cols=139 Identities=11% Similarity=0.055 Sum_probs=100.1
Q ss_pred HHHhhhhcCCCCCceeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHHHhcc-cc----eeccccccCC-C
Q 006905 457 YKTMNNQLGQSGRYRNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIYERGL-VG----TYTNWCEAMS-T 528 (626)
Q Consensus 457 y~~~~~~~~~~~~~r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~rgl-i~----~~~~~~e~~~-~ 528 (626)
|......+.. -.+|||+|||+|.+|..++.. .+ .|+++|.++.|++++.++.- .| +-+ ++... .
T Consensus 40 Y~~~~~~l~~---~~~VLDlGCG~GplAl~l~~~~p~a---~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~ 111 (200)
T 3fzg_A 40 YTYVFGNIKH---VSSILDFGCGFNPLALYQWNENEKI---IYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDV 111 (200)
T ss_dssp HHHHHHHSCC---CSEEEEETCTTHHHHHHHHCSSCCC---EEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHH
T ss_pred HHHHHhhcCC---CCeEEEecCCCCHHHHHHHhcCCCC---EEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccC
Confidence 5554444544 668999999999999999766 44 79999999999999987642 12 111 22222 2
Q ss_pred CCCccceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcC---------h--HHHHHHHHHHHhCCCeeEEeecC
Q 006905 529 YPRTYDLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDD---------V--DELVKVKRIIDALKWQSQIVDHE 597 (626)
Q Consensus 529 yp~t~Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~---------~--~~~~~~~~~~~~l~w~~~~~~~e 597 (626)
.|.+||+|-+..++++..++ +..+..+.+.|||||.||--++ | ......++.+..=.|.+......
T Consensus 112 ~~~~~DvVLa~k~LHlL~~~---~~al~~v~~~L~pggvfISfptksl~Gr~~gm~~~Y~~~~~~~~~~~~~~~~~~~~~ 188 (200)
T 3fzg_A 112 YKGTYDVVFLLKMLPVLKQQ---DVNILDFLQLFHTQNFVISFPIKSLSGKEKGMEENYQLWFESFTKGWIKILDSKVIG 188 (200)
T ss_dssp TTSEEEEEEEETCHHHHHHT---TCCHHHHHHTCEEEEEEEEEECCCCC--CTTCCCCHHHHHHHHTTTTSCEEEEEEET
T ss_pred CCCCcChhhHhhHHHhhhhh---HHHHHHHHHHhCCCCEEEEeChHHhcCCCcchhhhHHHHHHHhccCcceeeeeeeeC
Confidence 35999999998888887533 5677799999999999999872 1 24677777788888887755433
Q ss_pred CCCCCcceEEEEEe
Q 006905 598 DGPLEREKLLFAVK 611 (626)
Q Consensus 598 ~~~~~~e~~l~~~K 611 (626)
.|-+-|.+|
T Consensus 189 -----nEl~y~~~~ 197 (200)
T 3fzg_A 189 -----NELVYITSG 197 (200)
T ss_dssp -----TEEEEEECC
T ss_pred -----ceEEEEEec
Confidence 455666555
No 395
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.46 E-value=8.6e-08 Score=96.27 Aligned_cols=128 Identities=9% Similarity=0.122 Sum_probs=83.5
Q ss_pred ceeEEeccCchhhHhhhhhCC---CeEEEEeccCccCcccHHHHHHh----cc---cceec-cccccCCCC-----CCcc
Q 006905 470 YRNILDMNAHLGGFAAALIDF---PVWVMNVVPAEAKINTLGVIYER----GL---VGTYT-NWCEAMSTY-----PRTY 533 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~---~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~-~~~e~~~~y-----p~t~ 533 (626)
-++|||+|||.|..+.+|++. +. .|+.+|.++.+++.+.++ |+ |.+++ |..+.+..+ +.+|
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~---~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~f 137 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDG---QVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQF 137 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTC---EEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCE
Confidence 468999999999999999873 33 577888877777655444 54 33443 222222223 4799
Q ss_pred ceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh------------HHHHHHHHHHHhC----CCeeEEeecC
Q 006905 534 DLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV------------DELVKVKRIIDAL----KWQSQIVDHE 597 (626)
Q Consensus 534 Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~------------~~~~~~~~~~~~l----~w~~~~~~~e 597 (626)
|+|.++.. .-+...+|.++.|+|||||.+++.|.. .....++++.+.+ ++++.+...
T Consensus 138 D~V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~- 210 (242)
T 3r3h_A 138 DFIFIDAD------KTNYLNYYELALKLVTPKGLIAIDNIFWDGKVIDPNDTSGQTREIKKLNQVIKNDSRVFVSLLAI- 210 (242)
T ss_dssp EEEEEESC------GGGHHHHHHHHHHHEEEEEEEEEECSSSSSCSSCTTCCCHHHHHHHHHHHHHHTCCSEEEEEESS-
T ss_pred eEEEEcCC------hHHhHHHHHHHHHhcCCCeEEEEECCccCCcccCccccChHHHHHHHHHHHHhhCCCEEEEEEEc-
Confidence 99988643 224567899999999999999995432 1233444444444 455555432
Q ss_pred CCCCCcceEEEEEec
Q 006905 598 DGPLEREKLLFAVKL 612 (626)
Q Consensus 598 ~~~~~~e~~l~~~K~ 612 (626)
.+.+++++|+
T Consensus 211 -----~dG~~~~~k~ 220 (242)
T 3r3h_A 211 -----ADGMFLVQPI 220 (242)
T ss_dssp -----SSCEEEEEEC
T ss_pred -----cCceEEEEEc
Confidence 3668888873
No 396
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.46 E-value=8.9e-09 Score=102.13 Aligned_cols=96 Identities=11% Similarity=0.136 Sum_probs=72.1
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc---cceeccccccCCCCCCccceeeecccc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL---VGTYTNWCEAMSTYPRTYDLIHADSVF 542 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~~~~e~~~~yp~t~Dlih~~~~f 542 (626)
-.+|||+|||.|+++..|++.+. +|+.+|.++.++..+.++ |+ +.+++.-.+.+. -+.+||+|.++..|
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~ 154 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALTGM---RVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPW 154 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCC
T ss_pred CCEEEECccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCc
Confidence 35799999999999999999874 899999999999988765 32 333332111222 13899999999888
Q ss_pred ccCCCCCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 543 SLYKDRCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 543 ~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
.+.... ...+.|+.|+|+|||.+++..
T Consensus 155 ~~~~~~---~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 155 GGPDYA---TAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp SSGGGG---GSSSBCTTTSCSSCHHHHHHH
T ss_pred CCcchh---hhHHHHHHhhcCCcceeHHHH
Confidence 875532 336779999999999987764
No 397
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.45 E-value=8.9e-07 Score=89.43 Aligned_cols=98 Identities=14% Similarity=-0.035 Sum_probs=71.2
Q ss_pred CCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCCC--eEEEEcccccCCCCCCCeeEEEecccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGVP--ALIGVLAAERLPYPSRAFDMAHCSRCL 285 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~~--~~~~v~d~~~Lpf~d~sFDlV~~~~~l 285 (626)
+.+|||||||+|.++..|++. .|+++|+++..+..+.. .+...++. +.+..+|......++..||+|+.....
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~-N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~IviagmG 100 (244)
T 3gnl_A 22 NERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQK-QVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMG 100 (244)
T ss_dssp SEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHH-HHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEEC
T ss_pred CCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHH-HHHHcCCCceEEEEecchhhccCccccccEEEEeCCc
Confidence 358999999999999999986 48899998865554443 34455653 677777765544444469998875432
Q ss_pred ccccccHHHHHHHHHhcccCCeEEEEEe
Q 006905 286 IPWNQFGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 286 ~h~~~~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
.+-...+|.+..+.|+++|+|+++.
T Consensus 101 ---g~lI~~IL~~~~~~L~~~~~lIlq~ 125 (244)
T 3gnl_A 101 ---GTLIRTILEEGAAKLAGVTKLILQP 125 (244)
T ss_dssp ---HHHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred ---hHHHHHHHHHHHHHhCCCCEEEEEc
Confidence 1112678899999999999999984
No 398
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.44 E-value=3.9e-08 Score=102.55 Aligned_cols=95 Identities=17% Similarity=0.104 Sum_probs=59.5
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCcc----CcccHHHHHHh--cc--cceeccccc-cCCCCC-Cccceeeec
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEA----KINTLGVIYER--GL--VGTYTNWCE-AMSTYP-RTYDLIHAD 539 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~----~~~~l~~~~~r--gl--i~~~~~~~e-~~~~yp-~t~Dlih~~ 539 (626)
-.+|||+|||+|+++..|++++ .|+++|. +..++..+..+ |. +.+.. . .+...| .+||+|.|+
T Consensus 83 g~~VLDlGcG~G~~s~~la~~~----~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~D~~~l~~~~fD~V~sd 155 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGGLK----NVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQS---GVDVFFIPPERCDTLLCD 155 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHTST----TEEEEEEECCCSTTSCCCCCCCSTTGGGEEEEC---SCCTTTSCCCCCSEEEEC
T ss_pred CCEEEEEcCCCCHHHHHHHhcC----CEEEEeccccCchhHHHHHHhhhcCCCCeEEEe---ccccccCCcCCCCEEEEC
Confidence 4689999999999999999883 2445554 22332111111 11 22222 2 344445 899999998
Q ss_pred cccccCCCCCC---HHHHHHHhhhhccCCcEEEEE
Q 006905 540 SVFSLYKDRCE---TEDILLEMDRILRPEGGVIFR 571 (626)
Q Consensus 540 ~~f~~~~~~c~---~~~~l~E~dRiLRPgG~~i~~ 571 (626)
..++.....-+ ...+|.++.|+|||||.|++.
T Consensus 156 ~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 156 IGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 88751110000 114789999999999999995
No 399
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.44 E-value=6.6e-07 Score=96.17 Aligned_cols=104 Identities=9% Similarity=-0.073 Sum_probs=74.9
Q ss_pred CCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCC---CeEEEEcccccCCC----CCCCeeEEEe
Q 006905 212 IRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGV---PALIGVLAAERLPY----PSRAFDMAHC 281 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~---~~~~~v~d~~~Lpf----~d~sFDlV~~ 281 (626)
+.+|||+|||+|.++..++.. .|+++|+++..+..+.. .+..+++ .+.+..+|+..+.. ...+||+|++
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~-n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~ 299 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQ-NVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVM 299 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHH-HHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHH-HHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEE
Confidence 458999999999999999886 58899998865554333 3445566 57788777554321 1468999999
Q ss_pred ccccc--------cccccHHHHHHHHHhcccCCeEEEEEeCCC
Q 006905 282 SRCLI--------PWNQFGGIYLIEVDRVLRPGGYWILSGPPI 316 (626)
Q Consensus 282 ~~~l~--------h~~~~~~~~L~Ei~RvLKPGG~lvis~pp~ 316 (626)
..... ........++.++.++|+|||+++++..+.
T Consensus 300 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 300 DPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp CCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 75321 112334688999999999999999987543
No 400
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.43 E-value=4.2e-07 Score=92.65 Aligned_cols=89 Identities=9% Similarity=0.040 Sum_probs=65.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHc---------CCCeEEEEcccccCCCCCCCeeEE
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALER---------GVPALIGVLAAERLPYPSRAFDMA 279 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~er---------g~~~~~~v~d~~~Lpf~d~sFDlV 279 (626)
...+|||||||+|.++..+++. .++++|+++. +++.|+++ ...+.+..+|..... ++||+|
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~-----~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~I 143 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEK-----ILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLI 143 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHH-----HHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHH-----HHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEE
Confidence 3569999999999999988875 5777777653 44444322 224566666765544 789999
Q ss_pred EeccccccccccHHHHHHHHHhcccCCeEEEEEe
Q 006905 280 HCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 280 ~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
++.. .++..++.++.++|||||.+++..
T Consensus 144 i~d~------~dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 144 FCLQ------EPDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp EESS------CCCHHHHHHHHTTEEEEEEEEEEE
T ss_pred EECC------CChHHHHHHHHHhcCCCcEEEEEc
Confidence 9863 123558999999999999999964
No 401
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.43 E-value=5.4e-07 Score=93.42 Aligned_cols=88 Identities=19% Similarity=0.277 Sum_probs=58.2
Q ss_pred HHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCC-CeEEEEcccccCCCC
Q 006905 196 AYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGV-PALIGVLAAERLPYP 272 (626)
Q Consensus 196 ~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~-~~~~~v~d~~~Lpf~ 272 (626)
..++.+.+.+.... +.+|||||||+|.++..|+++ .++++|+++.++..+..+. ...+. .+.+..+|+..++++
T Consensus 29 ~i~~~i~~~~~~~~--~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~-~~~~~~~v~~~~~D~~~~~~~ 105 (299)
T 2h1r_A 29 GILDKIIYAAKIKS--SDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRC-LYEGYNNLEVYEGDAIKTVFP 105 (299)
T ss_dssp HHHHHHHHHHCCCT--TCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHH-HHTTCCCEEC----CCSSCCC
T ss_pred HHHHHHHHhcCCCC--cCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHH-HHcCCCceEEEECchhhCCcc
Confidence 45566666665443 458999999999999999986 6888888775554433332 23343 466777777777654
Q ss_pred CCCeeEEEecccccccc
Q 006905 273 SRAFDMAHCSRCLIPWN 289 (626)
Q Consensus 273 d~sFDlV~~~~~l~h~~ 289 (626)
+||+|+++... ++.
T Consensus 106 --~~D~Vv~n~py-~~~ 119 (299)
T 2h1r_A 106 --KFDVCTANIPY-KIS 119 (299)
T ss_dssp --CCSEEEEECCG-GGH
T ss_pred --cCCEEEEcCCc-ccc
Confidence 79999998765 444
No 402
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.42 E-value=6.3e-08 Score=99.58 Aligned_cols=95 Identities=16% Similarity=0.114 Sum_probs=61.1
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc--------cceeccccccCCCCC-Cccceeeecc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL--------VGTYTNWCEAMSTYP-RTYDLIHADS 540 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl--------i~~~~~~~e~~~~yp-~t~Dlih~~~ 540 (626)
-.+|||+|||+|+|+..|++++ .|+++|.++ |+..+.++.+ +.++.. +..+..+| .+||+|.|+.
T Consensus 83 g~~VLDlGcGtG~~s~~la~~~----~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~-~~D~~~l~~~~fD~Vvsd~ 156 (276)
T 2wa2_A 83 KGTVVDLGCGRGSWSYYAASQP----NVREVKAYT-LGTSGHEKPRLVETFGWNLITFKS-KVDVTKMEPFQADTVLCDI 156 (276)
T ss_dssp CEEEEEESCTTCHHHHHHHTST----TEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEEC-SCCGGGCCCCCCSEEEECC
T ss_pred CCEEEEeccCCCHHHHHHHHcC----CEEEEECch-hhhhhhhchhhhhhcCCCeEEEec-cCcHhhCCCCCcCEEEECC
Confidence 4679999999999999999872 467777774 5333322222 122200 12333455 8999999977
Q ss_pred ccccCCCC-CCHH---HHHHHhhhhccCCc--EEEEE
Q 006905 541 VFSLYKDR-CETE---DILLEMDRILRPEG--GVIFR 571 (626)
Q Consensus 541 ~f~~~~~~-c~~~---~~l~E~dRiLRPgG--~~i~~ 571 (626)
. ...... -+.. .+|.++.|+||||| .|++.
T Consensus 157 ~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~ 192 (276)
T 2wa2_A 157 G-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVK 192 (276)
T ss_dssp C-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred C-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEE
Confidence 6 222110 0001 37899999999999 99985
No 403
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.42 E-value=2.3e-07 Score=99.35 Aligned_cols=104 Identities=13% Similarity=0.038 Sum_probs=74.0
Q ss_pred CCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCC-eEEEEcccccCCC----CCCCeeEEEecc
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVP-ALIGVLAAERLPY----PSRAFDMAHCSR 283 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~-~~~~v~d~~~Lpf----~d~sFDlV~~~~ 283 (626)
.+.+|||+|||+|.++..++.. .|+++|+++..+..+.. .+..+++. +.+..+|+..+.. .+++||+|++..
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~-n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dp 287 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEE-NARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDP 287 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHH-HHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHH-HHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECC
Confidence 3568999999999999998875 78899998865554433 33444554 6777777654321 256899999965
Q ss_pred cccccc--------ccHHHHHHHHHhcccCCeEEEEEeCC
Q 006905 284 CLIPWN--------QFGGIYLIEVDRVLRPGGYWILSGPP 315 (626)
Q Consensus 284 ~l~h~~--------~~~~~~L~Ei~RvLKPGG~lvis~pp 315 (626)
...... .....++.++.++|+|||.++++..+
T Consensus 288 P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 288 PAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp CCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 331111 22357899999999999999998753
No 404
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.42 E-value=6.5e-07 Score=96.50 Aligned_cols=102 Identities=14% Similarity=-0.021 Sum_probs=71.2
Q ss_pred CCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccC-CCCCCCeeEEEeccccccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERL-PYPSRAFDMAHCSRCLIPW 288 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~L-pf~d~sFDlV~~~~~l~h~ 288 (626)
+.+|||+|||+|.++..++.. .|+++|+++..+..+..+ +..+++...+...|+..+ +...+.||+|++.......
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n-~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~~ 293 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQA-ALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLVK 293 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCCCS
T ss_pred CCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHH-HHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcCCC
Confidence 568999999999999999886 488888888666544433 334566655667775443 2223349999996543111
Q ss_pred --------cccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 289 --------NQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 289 --------~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
......++.++.++|||||+|++...
T Consensus 294 ~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~ 327 (393)
T 4dmg_A 294 RPEELPAMKRHLVDLVREALRLLAEEGFLWLSSC 327 (393)
T ss_dssp SGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 11225788999999999999997654
No 405
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.41 E-value=2.7e-07 Score=94.98 Aligned_cols=129 Identities=12% Similarity=0.237 Sum_probs=89.8
Q ss_pred eeEEeccCchhhHhhhhhCC-CeEEEEeccCccCcccHHHHHHh----cc---cceec-cccccCCCCCCcc---ceeee
Q 006905 471 RNILDMNAHLGGFAAALIDF-PVWVMNVVPAEAKINTLGVIYER----GL---VGTYT-NWCEAMSTYPRTY---DLIHA 538 (626)
Q Consensus 471 r~vlD~g~g~G~faa~l~~~-~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~-~~~e~~~~yp~t~---Dlih~ 538 (626)
.+|||+|||+|.++.+|++. +. +|+.+|.++.++.++.++ |+ +.+++ ||.+. .+.+| |+|.+
T Consensus 125 ~~vLDlG~GsG~~~~~la~~~~~---~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~---~~~~f~~~D~Ivs 198 (284)
T 1nv8_A 125 KTVADIGTGSGAIGVSVAKFSDA---IVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---FKEKFASIEMILS 198 (284)
T ss_dssp CEEEEESCTTSHHHHHHHHHSSC---EEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---GGGGTTTCCEEEE
T ss_pred CEEEEEeCchhHHHHHHHHCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh---cccccCCCCEEEE
Confidence 47999999999999999877 33 799999999999988765 43 33443 44442 34689 99999
Q ss_pred ccccc-----------cCC-----CCCCHHHHHHHhh-hhccCCcEEEEEcChHHHHHHHHHHHhCCCeeEEeecCCCCC
Q 006905 539 DSVFS-----------LYK-----DRCETEDILLEMD-RILRPEGGVIFRDDVDELVKVKRIIDALKWQSQIVDHEDGPL 601 (626)
Q Consensus 539 ~~~f~-----------~~~-----~~c~~~~~l~E~d-RiLRPgG~~i~~d~~~~~~~~~~~~~~l~w~~~~~~~e~~~~ 601 (626)
+--+. +.. ..++-..++.++- ++|+|||++++.-..+....+.+++... ....|..
T Consensus 199 nPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~q~~~v~~~~~~~---~~~~D~~---- 271 (284)
T 1nv8_A 199 NPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGEDQVEELKKIVSDT---VFLKDSA---- 271 (284)
T ss_dssp CCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTTCHHHHTTTSTTC---EEEECTT----
T ss_pred cCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHHhC---CeecccC----
Confidence 62221 110 0122236899999 9999999999976666666777776665 2233322
Q ss_pred CcceEEEEEec
Q 006905 602 EREKLLFAVKL 612 (626)
Q Consensus 602 ~~e~~l~~~K~ 612 (626)
+.+++++++++
T Consensus 272 g~~R~~~~~~k 282 (284)
T 1nv8_A 272 GKYRFLLLNRR 282 (284)
T ss_dssp SSEEEEEEECC
T ss_pred CCceEEEEEEc
Confidence 56788888765
No 406
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.41 E-value=1.8e-06 Score=93.91 Aligned_cols=96 Identities=18% Similarity=0.140 Sum_probs=69.2
Q ss_pred CCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCCCeeEEEecccccccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSRAFDMAHCSRCLIPWN 289 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h~~ 289 (626)
+.+|||+|||+|.++..|++. .|+++|+++.++..+.. .+..+++.+.+..+|+..+.. . +||+|++.....
T Consensus 291 ~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~-n~~~ngl~v~~~~~d~~~~~~-~-~fD~Vv~dPPr~--- 364 (425)
T 2jjq_A 291 GEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARR-NVEINNVDAEFEVASDREVSV-K-GFDTVIVDPPRA--- 364 (425)
T ss_dssp SSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHHHHTCCEEEEECCTTTCCC-T-TCSEEEECCCTT---
T ss_pred CCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHH-HHHHcCCcEEEEECChHHcCc-c-CCCEEEEcCCcc---
Confidence 458999999999999999986 68899998866654443 334456567788888777643 2 899999976431
Q ss_pred ccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 290 QFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 290 ~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
.....++..+ +.|+|||.++++..
T Consensus 365 g~~~~~~~~l-~~l~p~givyvsc~ 388 (425)
T 2jjq_A 365 GLHPRLVKRL-NREKPGVIVYVSCN 388 (425)
T ss_dssp CSCHHHHHHH-HHHCCSEEEEEESC
T ss_pred chHHHHHHHH-HhcCCCcEEEEECC
Confidence 1113455555 45999999999854
No 407
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.41 E-value=3.2e-07 Score=96.05 Aligned_cols=107 Identities=14% Similarity=0.081 Sum_probs=69.1
Q ss_pred ceeEEeccCchhhHhhhhhCC-CeEEEEeccCccCcccHHHHHHhcc-----------------cceec-cccccCCCCC
Q 006905 470 YRNILDMNAHLGGFAAALIDF-PVWVMNVVPAEAKINTLGVIYERGL-----------------VGTYT-NWCEAMSTYP 530 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~-~v~~mnv~~~~~~~~~l~~~~~rgl-----------------i~~~~-~~~e~~~~yp 530 (626)
-.+|||+|||.|.++.+|++. +- ...|+.+|.++.+++.+.++.- +.+++ |..+....++
T Consensus 106 g~~VLDiG~G~G~~~~~la~~~g~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~ 184 (336)
T 2b25_A 106 GDTVLEAGSGSGGMSLFLSKAVGS-QGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIK 184 (336)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCT-TCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC----
T ss_pred CCEEEEeCCCcCHHHHHHHHHhCC-CceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccC
Confidence 458999999999999999875 21 0268889999899998877531 23333 3333222345
Q ss_pred -CccceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh-HHHHHHHHHHH
Q 006905 531 -RTYDLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV-DELVKVKRIID 585 (626)
Q Consensus 531 -~t~Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~-~~~~~~~~~~~ 585 (626)
.+||+|.++.. +...+|.++.|+|||||.+++.... +.+.++.+.++
T Consensus 185 ~~~fD~V~~~~~--------~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~ 233 (336)
T 2b25_A 185 SLTFDAVALDML--------NPHVTLPVFYPHLKHGGVCAVYVVNITQVIELLDGIR 233 (336)
T ss_dssp ---EEEEEECSS--------STTTTHHHHGGGEEEEEEEEEEESSHHHHHHHHHHHH
T ss_pred CCCeeEEEECCC--------CHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHH
Confidence 68999998421 2234789999999999999987543 33444444444
No 408
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.41 E-value=1.3e-06 Score=87.58 Aligned_cols=134 Identities=11% Similarity=0.112 Sum_probs=77.8
Q ss_pred ceeEEeccCchhhHhhhhhCC-CeEEEEeccCccCcccH----HHHHHhc-ccceeccccccC--CCCCCccceeeeccc
Q 006905 470 YRNILDMNAHLGGFAAALIDF-PVWVMNVVPAEAKINTL----GVIYERG-LVGTYTNWCEAM--STYPRTYDLIHADSV 541 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~-~v~~mnv~~~~~~~~~l----~~~~~rg-li~~~~~~~e~~--~~yp~t~Dlih~~~~ 541 (626)
-.+|||+|||+|+++..|++. + -.-.|+++|.++.++ ..+.+|. +.-...|-.... ...+.+||+|.++..
T Consensus 77 g~~VLDlG~GtG~~t~~la~~v~-~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a 155 (232)
T 3id6_C 77 GTKVLYLGAASGTTISHVSDIIE-LNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIA 155 (232)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHT-TTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEECCC
T ss_pred CCEEEEEeecCCHHHHHHHHHhC-CCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEecCC
Confidence 467999999999999988763 1 001578889998775 3444442 222222322111 122478999998754
Q ss_pred cccCCCCCCHHHHHH-HhhhhccCCcEEEEEc----------ChHHHHHHHHHHHhCCCeeE-EeecCCCCC-CcceEEE
Q 006905 542 FSLYKDRCETEDILL-EMDRILRPEGGVIFRD----------DVDELVKVKRIIDALKWQSQ-IVDHEDGPL-EREKLLF 608 (626)
Q Consensus 542 f~~~~~~c~~~~~l~-E~dRiLRPgG~~i~~d----------~~~~~~~~~~~~~~l~w~~~-~~~~e~~~~-~~e~~l~ 608 (626)
+ .+...+|. .+.|+|||||.++++- ..++...+...++.-..+.. ..+.| |. ...-+++
T Consensus 156 ~------~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~~l~--p~~~~h~~v~ 227 (232)
T 3id6_C 156 Q------PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQIINLD--PYDKDHAIVL 227 (232)
T ss_dssp C------TTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEEEECT--TTCSSCEEEE
T ss_pred C------hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEeccC--CCcCceEEEE
Confidence 3 34455555 5567999999999862 11222333344444344433 22333 33 2456777
Q ss_pred EEec
Q 006905 609 AVKL 612 (626)
Q Consensus 609 ~~K~ 612 (626)
++|+
T Consensus 228 ~~~~ 231 (232)
T 3id6_C 228 SKYK 231 (232)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 7775
No 409
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.41 E-value=9.3e-07 Score=91.79 Aligned_cols=141 Identities=16% Similarity=0.110 Sum_probs=89.4
Q ss_pred ceeEEeccCchhhHhhhhhCC-CeEEEEeccCccCcccHHHHHHhc------c----cceec-cccccCCC-CCCcccee
Q 006905 470 YRNILDMNAHLGGFAAALIDF-PVWVMNVVPAEAKINTLGVIYERG------L----VGTYT-NWCEAMST-YPRTYDLI 536 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~-~v~~mnv~~~~~~~~~l~~~~~rg------l----i~~~~-~~~e~~~~-yp~t~Dli 536 (626)
-.+|||+|||.|+++..|++. ++ .+|+.+|.++.+++++.++- + +.++. |..+-... -+++||+|
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 96 PERVLIIGGGDGGVLREVLRHGTV--EHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp CCEEEEEECTTSHHHHHHHTCTTC--CEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCeEEEEcCCCCHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 478999999999999999987 33 37889999989999888753 1 22222 22211111 14899999
Q ss_pred eeccccccCCCCCC-HHHHHHHhhhhccCCcEEEEEcCh-----HHHHHHHHHHHhCCCeeE-EeecC--CCCCCcceEE
Q 006905 537 HADSVFSLYKDRCE-TEDILLEMDRILRPEGGVIFRDDV-----DELVKVKRIIDALKWQSQ-IVDHE--DGPLEREKLL 607 (626)
Q Consensus 537 h~~~~f~~~~~~c~-~~~~l~E~dRiLRPgG~~i~~d~~-----~~~~~~~~~~~~l~w~~~-~~~~e--~~~~~~e~~l 607 (626)
.++........... -..++.++.|+|||||.+++.... .....+.+.++...+... ..... .-+.+.-.++
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~~~~vP~yp~g~w~f~ 253 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYALMHVPTYPCGSIGTL 253 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEEECCCTTSTTSCCEEE
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEEEeecccccCcceEEE
Confidence 99655433221111 157899999999999999996332 345666666666655433 33221 1122445688
Q ss_pred EEEec
Q 006905 608 FAVKL 612 (626)
Q Consensus 608 ~~~K~ 612 (626)
+|.|.
T Consensus 254 ~as~~ 258 (304)
T 3bwc_A 254 VCSKK 258 (304)
T ss_dssp EEESS
T ss_pred EEeCC
Confidence 89886
No 410
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.41 E-value=6.3e-07 Score=99.03 Aligned_cols=103 Identities=15% Similarity=0.182 Sum_probs=71.7
Q ss_pred CCCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcCC-CeEEEEcccccCCC-CCCCeeEEEecc
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERGV-PALIGVLAAERLPY-PSRAFDMAHCSR 283 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg~-~~~~~v~d~~~Lpf-~d~sFDlV~~~~ 283 (626)
++.+|||+|||+|..+..|++. .|+++|+++..+..+.. .+...|+ .+.+...|...++. .+++||+|++..
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~-n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~ 195 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHA-NISRCGISNVALTHFDGRVFGAAVPEMFDAILLDA 195 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHH-HHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEEC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-HHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECC
Confidence 4569999999999999988874 48899998755543333 3334455 46667777766653 457899999721
Q ss_pred ------ccc-------cccc--------cHHHHHHHHHhcccCCeEEEEEeC
Q 006905 284 ------CLI-------PWNQ--------FGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 284 ------~l~-------h~~~--------~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
.+. +|.. ....+|.++.++|||||+|++++-
T Consensus 196 PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTc 247 (479)
T 2frx_A 196 PCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTC 247 (479)
T ss_dssp CCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred CcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecc
Confidence 111 1211 124689999999999999999864
No 411
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.40 E-value=3e-07 Score=101.07 Aligned_cols=110 Identities=15% Similarity=0.195 Sum_probs=74.7
Q ss_pred HHhhccCCCCCCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCC-CCCCC
Q 006905 202 GKLINLNDGSIRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLP-YPSRA 275 (626)
Q Consensus 202 ~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lp-f~d~s 275 (626)
..++... ++.+|||+|||+|..+..|+++ .|+++|+++..+..+. +.+...|+.+.+...|...++ +.+++
T Consensus 94 a~~L~~~--~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~-~n~~r~G~~v~~~~~Da~~l~~~~~~~ 170 (464)
T 3m6w_A 94 GVLLDPK--PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLL-ENVERWGAPLAVTQAPPRALAEAFGTY 170 (464)
T ss_dssp HHHHCCC--TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHH-HHHHHHCCCCEEECSCHHHHHHHHCSC
T ss_pred HHhcCcC--CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-HHHHHcCCeEEEEECCHHHhhhhcccc
Confidence 3444433 3559999999999999988864 4889999886554333 334445666667777766665 34678
Q ss_pred eeEEEeccc------cc-------cccc--------cHHHHHHHHHhcccCCeEEEEEeC
Q 006905 276 FDMAHCSRC------LI-------PWNQ--------FGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 276 FDlV~~~~~------l~-------h~~~--------~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
||+|++... +. .|.. ....+|.++.++|||||.|++++-
T Consensus 171 FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTC 230 (464)
T 3m6w_A 171 FHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTC 230 (464)
T ss_dssp EEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred CCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 999995211 11 1111 115689999999999999999864
No 412
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.40 E-value=2.4e-07 Score=98.71 Aligned_cols=97 Identities=15% Similarity=0.195 Sum_probs=71.3
Q ss_pred CCceeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHHHhcccceeccccccCCCCCCccceeeeccccccC
Q 006905 468 GRYRNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIYERGLVGTYTNWCEAMSTYPRTYDLIHADSVFSLY 545 (626)
Q Consensus 468 ~~~r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~rgli~~~~~~~e~~~~yp~t~Dlih~~~~f~~~ 545 (626)
....+|||+|||.|.++..|++. ++ .++.+|. +.+++.+.++.-+..... ..+.++|.. |+|++..+++++
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~-~~~~~~a~~~~~v~~~~~--d~~~~~p~~-D~v~~~~vlh~~ 274 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSI---NAINFDL-PHVIQDAPAFSGVEHLGG--DMFDGVPKG-DAIFIKWICHDW 274 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTC---EEEEEEC-HHHHTTCCCCTTEEEEEC--CTTTCCCCC-SEEEEESCGGGB
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCC---EEEEEeh-HHHHHhhhhcCCCEEEec--CCCCCCCCC-CEEEEechhhcC
Confidence 55789999999999999999874 33 4666777 366666554432333321 223456755 999999999988
Q ss_pred CCCCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 546 KDRCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 546 ~~~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
.+. +...+|.++.|+|||||+++|.|
T Consensus 275 ~~~-~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 275 SDE-HCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp CHH-HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CHH-HHHHHHHHHHHHcCCCCEEEEEE
Confidence 753 34579999999999999999975
No 413
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.40 E-value=2.9e-07 Score=91.45 Aligned_cols=127 Identities=12% Similarity=0.152 Sum_probs=85.3
Q ss_pred eeEEeccCchhhHhhhhhCC---CeEEEEeccCccCcccHHHHHHh----cc---cceec-cccccCCCCC-----Cccc
Q 006905 471 RNILDMNAHLGGFAAALIDF---PVWVMNVVPAEAKINTLGVIYER----GL---VGTYT-NWCEAMSTYP-----RTYD 534 (626)
Q Consensus 471 r~vlD~g~g~G~faa~l~~~---~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~-~~~e~~~~yp-----~t~D 534 (626)
++|||+|||.|.++.+|++. +. .|+.+|.++.+++++.++ |+ |.+.. +..+.+..+| .+||
T Consensus 74 ~~vLdiG~G~G~~~~~la~~~~~~~---~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 74 KQVLEIGVFRGYSALAMALQLPPDG---QIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTC---EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred CEEEEecCCCCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 58999999999999999875 33 688899998899888765 44 33333 2222222222 7899
Q ss_pred eeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh------------HHHHHHHHHHHh----CCCeeEEeecCC
Q 006905 535 LIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV------------DELVKVKRIIDA----LKWQSQIVDHED 598 (626)
Q Consensus 535 lih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~------------~~~~~~~~~~~~----l~w~~~~~~~e~ 598 (626)
+|.++.. .-+...++.++.|+|||||.+++.+.. .....++++.+. -++...+...
T Consensus 151 ~V~~d~~------~~~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~-- 222 (232)
T 3cbg_A 151 LIFIDAD------KRNYPRYYEIGLNLLRRGGLMVIDNVLWHGKVTEVDPQEAQTQVLQQFNRDLAQDERVRISVIPL-- 222 (232)
T ss_dssp EEEECSC------GGGHHHHHHHHHHTEEEEEEEEEECTTGGGGGGCSSCCSHHHHHHHHHHHHHTTCTTEEEEEECS--
T ss_pred EEEECCC------HHHHHHHHHHHHHHcCCCeEEEEeCCCcCCccCCcccCChHHHHHHHHHHHHhhCCCeEEEEEEc--
Confidence 9998543 235578999999999999999996422 223444444443 3566555432
Q ss_pred CCCCcceEEEEEec
Q 006905 599 GPLEREKLLFAVKL 612 (626)
Q Consensus 599 ~~~~~e~~l~~~K~ 612 (626)
.+.+.+++|.
T Consensus 223 ----~dG~~~~~~~ 232 (232)
T 3cbg_A 223 ----GDGMTLALKK 232 (232)
T ss_dssp ----BTCEEEEEEC
T ss_pred ----CCeEEEEEeC
Confidence 3568888874
No 414
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.40 E-value=7.3e-07 Score=102.98 Aligned_cols=103 Identities=13% Similarity=0.029 Sum_probs=75.4
Q ss_pred CCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCCC---eEEEEccccc-CCCCCCCeeEEEeccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGVP---ALIGVLAAER-LPYPSRAFDMAHCSRC 284 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~~---~~~~v~d~~~-Lpf~d~sFDlV~~~~~ 284 (626)
+.+|||+|||+|.++..++.. .|+++|+++..+..+..+. ..+++. +.+..+|... ++...++||+|++...
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~-~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP 618 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNL-RLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPP 618 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHH-HHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCC
T ss_pred CCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHH-HHcCCCccceEEEecCHHHHHHhcCCCccEEEECCc
Confidence 458999999999999998875 4889999886665544433 345554 7788888554 4445678999999653
Q ss_pred cc----------cccccHHHHHHHHHhcccCCeEEEEEeCC
Q 006905 285 LI----------PWNQFGGIYLIEVDRVLRPGGYWILSGPP 315 (626)
Q Consensus 285 l~----------h~~~~~~~~L~Ei~RvLKPGG~lvis~pp 315 (626)
.. +...+...++.++.++|+|||+|+++...
T Consensus 619 ~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 619 TFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp SBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 21 11223367899999999999999998754
No 415
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.39 E-value=1.1e-06 Score=92.48 Aligned_cols=102 Identities=13% Similarity=0.086 Sum_probs=72.9
Q ss_pred CCCEEEEeCCCCchHHHHHhhC---------CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCCCeeEEEe
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR---------NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSRAFDMAHC 281 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~---------~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~sFDlV~~ 281 (626)
...+|||+|||+|.++..+++. .++++|+++..+..+..+.. ..++.+.+..+|... +.+.+.||+|++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~-~~g~~~~i~~~D~l~-~~~~~~fD~Ii~ 207 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGAD-LQRQKMTLLHQDGLA-NLLVDPVDVVIS 207 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHH-HHTCCCEEEESCTTS-CCCCCCEEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHH-hCCCCceEEECCCCC-ccccCCccEEEE
Confidence 3568999999999998877653 47888887755544443333 346667777777544 234578999999
Q ss_pred ccccccccccH-----------------HHHHHHHHhcccCCeEEEEEeC
Q 006905 282 SRCLIPWNQFG-----------------GIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 282 ~~~l~h~~~~~-----------------~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+..+.++..+. ..++..+.+.|+|||++++..|
T Consensus 208 NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 208 DLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVP 257 (344)
T ss_dssp ECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 98764442211 2579999999999999999875
No 416
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.39 E-value=1.6e-06 Score=91.37 Aligned_cols=92 Identities=8% Similarity=0.032 Sum_probs=69.4
Q ss_pred CCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccccCCCCCCCeeEEEecccccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAERLPYPSRAFDMAHCSRCLIP 287 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h 287 (626)
+.+|||+|||+|.++.. ++. .++++|+++..+..+. +.+..+++ .+.+..+|...+. ++||+|++....
T Consensus 196 ~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~-~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP~-- 268 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLK-KNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLPK-- 268 (336)
T ss_dssp TCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHH-HHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCTT--
T ss_pred CCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHH-HHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCcH--
Confidence 45899999999999999 764 5889999886555433 33444555 4778888877665 789999996432
Q ss_pred ccccHHHHHHHHHhcccCCeEEEEEe
Q 006905 288 WNQFGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 288 ~~~~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
. ...++.++.++|+|||.+++..
T Consensus 269 ~---~~~~l~~~~~~L~~gG~l~~~~ 291 (336)
T 2yx1_A 269 F---AHKFIDKALDIVEEGGVIHYYT 291 (336)
T ss_dssp T---GGGGHHHHHHHEEEEEEEEEEE
T ss_pred h---HHHHHHHHHHHcCCCCEEEEEE
Confidence 1 2368899999999999999974
No 417
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.39 E-value=2.1e-07 Score=90.50 Aligned_cols=98 Identities=12% Similarity=0.076 Sum_probs=71.3
Q ss_pred eeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc--cceec-cccccCCCCCCccceeeeccccc
Q 006905 471 RNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL--VGTYT-NWCEAMSTYPRTYDLIHADSVFS 543 (626)
Q Consensus 471 r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl--i~~~~-~~~e~~~~yp~t~Dlih~~~~f~ 543 (626)
.+|||+|||+|.++..++.++. -+|+.+|.++.+++.+.++ |+ +.+++ |..+.....+.+||+|.++..|.
T Consensus 56 ~~vLDlgcG~G~~~~~l~~~~~--~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~ 133 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEALSRYA--AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFR 133 (202)
T ss_dssp CEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSSS
T ss_pred CeEEEeCCCcCHHHHHHHhcCC--CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCCC
Confidence 4799999999999998777754 2789999999999988765 32 33444 22221222237999999977754
Q ss_pred cCCCCCCHHHHHHHhh--hhccCCcEEEEEcCh
Q 006905 544 LYKDRCETEDILLEMD--RILRPEGGVIFRDDV 574 (626)
Q Consensus 544 ~~~~~c~~~~~l~E~d--RiLRPgG~~i~~d~~ 574 (626)
. -..+.++.++. |+|||||.+++....
T Consensus 134 ~----~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 134 R----GLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp T----TTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred C----CcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 1 25577888885 479999999997554
No 418
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.39 E-value=2.8e-06 Score=88.00 Aligned_cols=143 Identities=11% Similarity=0.062 Sum_probs=85.7
Q ss_pred CceeEEeccCchhhHhhhhhCC-CeEEEEeccCccCcccHHHHHHhcc-----------cceec-cccccCCCCCCccce
Q 006905 469 RYRNILDMNAHLGGFAAALIDF-PVWVMNVVPAEAKINTLGVIYERGL-----------VGTYT-NWCEAMSTYPRTYDL 535 (626)
Q Consensus 469 ~~r~vlD~g~g~G~faa~l~~~-~v~~mnv~~~~~~~~~l~~~~~rgl-----------i~~~~-~~~e~~~~yp~t~Dl 535 (626)
.-++|||+|||.|+++..|++. ++ -+|+.+|.++.+++++.++-- +.++. |..+-+...+++||+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~--~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDv 160 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNV--ESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTC--CEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccE
Confidence 3678999999999999999987 33 378888988899999877521 22222 222222222489999
Q ss_pred eeeccccccCCCC-CCHHHHHHHhhhhccCCcEEEEEc-----ChHHHHHHHHHHHhCCCeeEEeec--CCCCCCcceEE
Q 006905 536 IHADSVFSLYKDR-CETEDILLEMDRILRPEGGVIFRD-----DVDELVKVKRIIDALKWQSQIVDH--EDGPLEREKLL 607 (626)
Q Consensus 536 ih~~~~f~~~~~~-c~~~~~l~E~dRiLRPgG~~i~~d-----~~~~~~~~~~~~~~l~w~~~~~~~--e~~~~~~e~~l 607 (626)
|.++..-...... -....++.++.|+|||||.+++.- ..+.+..+.+.++..--.+..+.. -..|.+...++
T Consensus 161 Ii~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f~ 240 (294)
T 3adn_A 161 IISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFA 240 (294)
T ss_dssp EEECC----------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHCSEEEEEEEECTTSSSSEEEEE
T ss_pred EEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHHCCCeEEEEEEecccCCCceEEE
Confidence 9985433221111 111679999999999999999952 223344444433333233333221 12222445788
Q ss_pred EEEecc
Q 006905 608 FAVKLY 613 (626)
Q Consensus 608 ~~~K~~ 613 (626)
+|.|.+
T Consensus 241 ~as~~~ 246 (294)
T 3adn_A 241 WATDND 246 (294)
T ss_dssp EEESCT
T ss_pred EEeCCc
Confidence 898875
No 419
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.39 E-value=3.5e-07 Score=90.86 Aligned_cols=129 Identities=12% Similarity=0.150 Sum_probs=85.8
Q ss_pred ceeEEeccCchhhHhhhhhCC---CeEEEEeccCccCcccHHHHHHh----cc---cceec-cccccCCC----------
Q 006905 470 YRNILDMNAHLGGFAAALIDF---PVWVMNVVPAEAKINTLGVIYER----GL---VGTYT-NWCEAMST---------- 528 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~---~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~-~~~e~~~~---------- 528 (626)
-.+|||+|||.|.++..|++. +. +|+.+|.++.+++.+.++ |+ +.+.+ |..+.+..
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 137 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDG---KILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSW 137 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTC---EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGG
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccc
Confidence 357999999999999999875 33 788899998899888776 44 22322 21121111
Q ss_pred ---C--C-CccceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcC------------hHHHHHHHH----HHHh
Q 006905 529 ---Y--P-RTYDLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDD------------VDELVKVKR----IIDA 586 (626)
Q Consensus 529 ---y--p-~t~Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~------------~~~~~~~~~----~~~~ 586 (626)
| + .+||+|.++.. .-++..+|.++.|+|||||.+++.+. ......+++ +...
T Consensus 138 ~~~f~~~~~~fD~I~~~~~------~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (239)
T 2hnk_A 138 ASDFAFGPSSIDLFFLDAD------KENYPNYYPLILKLLKPGGLLIADNVLWDGSVADLSHQEPSTVGIRKFNELVYND 211 (239)
T ss_dssp GTTTCCSTTCEEEEEECSC------GGGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHC
T ss_pred cccccCCCCCcCEEEEeCC------HHHHHHHHHHHHHHcCCCeEEEEEccccCCcccCccccchHHHHHHHHHHHHhhC
Confidence 2 2 68999988532 22456899999999999999999751 112223333 3444
Q ss_pred CCCeeEEeecCCCCCCcceEEEEEecc
Q 006905 587 LKWQSQIVDHEDGPLEREKLLFAVKLY 613 (626)
Q Consensus 587 l~w~~~~~~~e~~~~~~e~~l~~~K~~ 613 (626)
-++.+.+.-.. ..+.+++|+.
T Consensus 212 ~~~~~~~~p~~------~g~~~~~~~~ 232 (239)
T 2hnk_A 212 SLVDVSLVPIA------DGVSLVRKRL 232 (239)
T ss_dssp TTEEEEEECST------TCEEEEEECC
T ss_pred CCeEEEEEEcC------CceEeeeehh
Confidence 55666655433 4588888875
No 420
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.39 E-value=2.7e-07 Score=89.60 Aligned_cols=91 Identities=18% Similarity=0.114 Sum_probs=68.4
Q ss_pred ceeEEeccCchhhHhhhhhCCC---eEEEEeccCccCcccHHHHHHh----cc--cceeccccccCCCCC--Cccceeee
Q 006905 470 YRNILDMNAHLGGFAAALIDFP---VWVMNVVPAEAKINTLGVIYER----GL--VGTYTNWCEAMSTYP--RTYDLIHA 538 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~---v~~mnv~~~~~~~~~l~~~~~r----gl--i~~~~~~~e~~~~yp--~t~Dlih~ 538 (626)
-.+|||+|||.|.++..|++.. . +|+.+|.++.+++.+.++ |+ +...+. .....+| .+||+|.+
T Consensus 78 ~~~vLdiG~G~G~~~~~l~~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~--d~~~~~~~~~~fD~v~~ 152 (215)
T 2yxe_A 78 GMKVLEIGTGCGYHAAVTAEIVGEDG---LVVSIERIPELAEKAERTLRKLGYDNVIVIVG--DGTLGYEPLAPYDRIYT 152 (215)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHHTCTTEEEEES--CGGGCCGGGCCEEEEEE
T ss_pred CCEEEEECCCccHHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHcCCCCeEEEEC--CcccCCCCCCCeeEEEE
Confidence 4589999999999999998753 3 688899998999988876 32 222221 1122333 78999999
Q ss_pred ccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh
Q 006905 539 DSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV 574 (626)
Q Consensus 539 ~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~ 574 (626)
..++.+.. .++.|+|||||.+++....
T Consensus 153 ~~~~~~~~---------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 153 TAAGPKIP---------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp SSBBSSCC---------HHHHHTEEEEEEEEEEESS
T ss_pred CCchHHHH---------HHHHHHcCCCcEEEEEECC
Confidence 88887654 4889999999999998654
No 421
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.39 E-value=2e-07 Score=100.61 Aligned_cols=112 Identities=9% Similarity=-0.006 Sum_probs=77.9
Q ss_pred ceeEEeccCchhhHhhhhhC-CCeEEEEeccCccCcccHHHHHHh-----------cc----cceeccccccCCCCC---
Q 006905 470 YRNILDMNAHLGGFAAALID-FPVWVMNVVPAEAKINTLGVIYER-----------GL----VGTYTNWCEAMSTYP--- 530 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~-~~v~~mnv~~~~~~~~~l~~~~~r-----------gl----i~~~~~~~e~~~~yp--- 530 (626)
-.+|||+|||+|.++..++. .+. -.|+++|.++.++.++.+. |+ |.+++ ..+...|
T Consensus 174 gd~VLDLGCGtG~l~l~lA~~~g~--~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~---GD~~~lp~~d 248 (438)
T 3uwp_A 174 DDLFVDLGSGVGQVVLQVAAATNC--KHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLER---GDFLSEEWRE 248 (438)
T ss_dssp TCEEEEESCTTSHHHHHHHHHCCC--SEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEE---CCTTSHHHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEE---CcccCCcccc
Confidence 55799999999999988874 343 2589999998888887652 33 33333 4555544
Q ss_pred --CccceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcChHH------HHHHHHHHHhCCCe
Q 006905 531 --RTYDLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDVDE------LVKVKRIIDALKWQ 590 (626)
Q Consensus 531 --~t~Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~~~------~~~~~~~~~~l~w~ 590 (626)
..||+|.++..+ +. -++...|.||.|+|||||.||+.|.... -..+..+...|++.
T Consensus 249 ~~~~aDVVf~Nn~~-F~---pdl~~aL~Ei~RvLKPGGrIVssE~f~p~d~~i~~rnl~di~~il~v~ 312 (438)
T 3uwp_A 249 RIANTSVIFVNNFA-FG---PEVDHQLKERFANMKEGGRIVSSKPFAPLNFRINSRNLSDIGTIMRVV 312 (438)
T ss_dssp HHHTCSEEEECCTT-CC---HHHHHHHHHHHTTSCTTCEEEESSCSSCTTCCCCSSSTTSGGGSEEEE
T ss_pred ccCCccEEEEcccc-cC---chHHHHHHHHHHcCCCCcEEEEeecccCCCCCCCcccccChhhhheee
Confidence 379999986553 22 2567889999999999999999865421 12344455555553
No 422
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.39 E-value=2e-06 Score=85.81 Aligned_cols=97 Identities=13% Similarity=0.014 Sum_probs=69.5
Q ss_pred CCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCCC--eEEEEccc-ccCCCCCCCeeEEEeccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGVP--ALIGVLAA-ERLPYPSRAFDMAHCSRC 284 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~~--~~~~v~d~-~~Lpf~d~sFDlV~~~~~ 284 (626)
+.+|||||||+|.++..|+.. .|+++|+++..+..+. +.+...++. +.+..+|. ..++. ...||+|+....
T Consensus 16 g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~-~N~~~~gl~~~i~~~~~d~l~~l~~-~~~~D~IviaG~ 93 (225)
T 3kr9_A 16 GAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAV-KNVEAHGLKEKIQVRLANGLAAFEE-TDQVSVITIAGM 93 (225)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHH-HHHHHTTCTTTEEEEECSGGGGCCG-GGCCCEEEEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHH-HHHHHcCCCceEEEEECchhhhccc-CcCCCEEEEcCC
Confidence 458999999999999999986 4889999886555443 344455663 66777774 34442 226999887553
Q ss_pred cccccccHHHHHHHHHhcccCCeEEEEEe
Q 006905 285 LIPWNQFGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 285 l~h~~~~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
- ..-...++.+....|+|+|+|+++.
T Consensus 94 G---g~~i~~Il~~~~~~L~~~~~lVlq~ 119 (225)
T 3kr9_A 94 G---GRLIARILEEGLGKLANVERLILQP 119 (225)
T ss_dssp C---HHHHHHHHHHTGGGCTTCCEEEEEE
T ss_pred C---hHHHHHHHHHHHHHhCCCCEEEEEC
Confidence 2 1112678999999999999999974
No 423
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.38 E-value=1.1e-06 Score=88.13 Aligned_cols=96 Identities=14% Similarity=0.014 Sum_probs=66.0
Q ss_pred ceeEEeccCchhhHhhhhhCC-CeEEEEeccCccCcccHHHHHHhc----ccc-eeccccccCCCCC---Cccceeeecc
Q 006905 470 YRNILDMNAHLGGFAAALIDF-PVWVMNVVPAEAKINTLGVIYERG----LVG-TYTNWCEAMSTYP---RTYDLIHADS 540 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~-~v~~mnv~~~~~~~~~l~~~~~rg----li~-~~~~~~e~~~~yp---~t~Dlih~~~ 540 (626)
--+|||+|||.|.++.+|++. + -.-.|..+|.++.|++.+.++- -+. +..+-+ ....|| .++|+|.++
T Consensus 78 G~~VldlG~G~G~~~~~la~~VG-~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~-~p~~~~~~~~~vDvVf~d- 154 (233)
T 4df3_A 78 GDRILYLGIASGTTASHMSDIIG-PRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDAR-FPEKYRHLVEGVDGLYAD- 154 (233)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHC-TTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTT-CGGGGTTTCCCEEEEEEC-
T ss_pred CCEEEEecCcCCHHHHHHHHHhC-CCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEecc-CccccccccceEEEEEEe-
Confidence 457999999999999999864 0 0113788899999998776542 222 322322 222233 889988763
Q ss_pred ccccCCCCCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 541 VFSLYKDRCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 541 ~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
+.+.. +.+.+|.|+.|+|||||.++|.+
T Consensus 155 -~~~~~---~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 155 -VAQPE---QAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp -CCCTT---HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -ccCCh---hHHHHHHHHHHhccCCCEEEEEE
Confidence 22222 44679999999999999999973
No 424
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.38 E-value=1.4e-06 Score=94.97 Aligned_cols=111 Identities=14% Similarity=0.134 Sum_probs=75.4
Q ss_pred HHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCC-CeEEEEccccc----
Q 006905 196 AYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGV-PALIGVLAAER---- 268 (626)
Q Consensus 196 ~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~-~~~~~v~d~~~---- 268 (626)
..++.+.+.+... .+.+|||+|||+|.++..|++. .|+++|+++..+..+.. .+...++ .+.+..+|...
T Consensus 273 ~l~~~~~~~l~~~--~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~-n~~~~~~~~v~f~~~d~~~~l~~ 349 (433)
T 1uwv_A 273 KMVARALEWLDVQ--PEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQ-NARLNGLQNVTFYHENLEEDVTK 349 (433)
T ss_dssp HHHHHHHHHHTCC--TTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHH-HHHHTTCCSEEEEECCTTSCCSS
T ss_pred HHHHHHHHhhcCC--CCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHH-HHHHcCCCceEEEECCHHHHhhh
Confidence 3444455555433 3458999999999999999986 68899998865554443 3344555 47788888655
Q ss_pred CCCCCCCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 269 LPYPSRAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 269 Lpf~d~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+++++++||+|+++... ... ..++..+. .++|++.++++..
T Consensus 350 ~~~~~~~fD~Vv~dPPr---~g~-~~~~~~l~-~~~p~~ivyvsc~ 390 (433)
T 1uwv_A 350 QPWAKNGFDKVLLDPAR---AGA-AGVMQQII-KLEPIRIVYVSCN 390 (433)
T ss_dssp SGGGTTCCSEEEECCCT---TCC-HHHHHHHH-HHCCSEEEEEESC
T ss_pred hhhhcCCCCEEEECCCC---ccH-HHHHHHHH-hcCCCeEEEEECC
Confidence 44667789999997643 221 34555444 4799999999854
No 425
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.38 E-value=4.6e-07 Score=91.21 Aligned_cols=94 Identities=10% Similarity=0.102 Sum_probs=69.2
Q ss_pred ceeEEeccCchhhHhhhhhCC---CeEEEEeccCccCcccHHHHHHh----cc---cceec-cccccCCCC------CCc
Q 006905 470 YRNILDMNAHLGGFAAALIDF---PVWVMNVVPAEAKINTLGVIYER----GL---VGTYT-NWCEAMSTY------PRT 532 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~---~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~-~~~e~~~~y------p~t 532 (626)
-++|||+|||.|..+..|++. +. .|+.+|.++.++.++.++ |+ |.+++ |..+.+..+ +.+
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~---~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 156 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDG---KILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGS 156 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTC---EEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTC
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCC
Confidence 458999999999999998764 33 688999998999887764 44 33333 222222223 478
Q ss_pred cceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 533 YDLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 533 ~Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
||+|.++.. .-+...++.++.|+|||||.+++.+
T Consensus 157 fD~V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 157 YDFIFVDAD------KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp BSEEEECSC------STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEEEcCc------hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 999988532 2356889999999999999999864
No 426
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.38 E-value=1.4e-07 Score=99.60 Aligned_cols=97 Identities=12% Similarity=0.179 Sum_probs=71.2
Q ss_pred CceeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHHHhcccceeccccccCCCCCCccceeeeccccccCC
Q 006905 469 RYRNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIYERGLVGTYTNWCEAMSTYPRTYDLIHADSVFSLYK 546 (626)
Q Consensus 469 ~~r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~rgli~~~~~~~e~~~~yp~t~Dlih~~~~f~~~~ 546 (626)
...+|||+|||.|.++.+|+++ ++ .++.+|. +.+++.+.+..-+.... ...+.++|. ||+|.+..++.++.
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~-~~~~~~a~~~~~v~~~~--~d~~~~~p~-~D~v~~~~~lh~~~ 260 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKL---KCIVFDR-PQVVENLSGSNNLTYVG--GDMFTSIPN-ADAVLLKYILHNWT 260 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTC---EEEEEEC-HHHHTTCCCBTTEEEEE--CCTTTCCCC-CSEEEEESCGGGSC
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCC---eEEEeeC-HHHHhhcccCCCcEEEe--ccccCCCCC-ccEEEeehhhccCC
Confidence 3578999999999999999865 33 5777887 57777665432133322 112234565 99999999999886
Q ss_pred CCCCHHHHHHHhhhhccC---CcEEEEEcC
Q 006905 547 DRCETEDILLEMDRILRP---EGGVIFRDD 573 (626)
Q Consensus 547 ~~c~~~~~l~E~dRiLRP---gG~~i~~d~ 573 (626)
+. ....+|.++.|+||| ||+++|.|.
T Consensus 261 d~-~~~~~l~~~~~~L~p~~~gG~l~i~e~ 289 (352)
T 1fp2_A 261 DK-DCLRILKKCKEAVTNDGKRGKVTIIDM 289 (352)
T ss_dssp HH-HHHHHHHHHHHHHSGGGCCCEEEEEEC
T ss_pred HH-HHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 43 234899999999999 999999753
No 427
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.38 E-value=1.5e-06 Score=89.47 Aligned_cols=124 Identities=10% Similarity=0.065 Sum_probs=82.8
Q ss_pred CCceecCCCCCCCCCcHHHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHH
Q 006905 178 GDRFRFPGGGTMFPNGADAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALE 254 (626)
Q Consensus 178 ge~~~Fp~ggt~F~~ga~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~e 254 (626)
|-.|.+.-...+|..+-..--.++.+++ .+ +.+|||+|||+|.++..++.+ .|+++|+++..+. ...+.++.
T Consensus 96 G~~~~~D~~k~~f~~~~~~er~ri~~~~--~~--g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~-~~~~N~~~ 170 (278)
T 3k6r_A 96 GIKYKLDVAKIMFSPANVKERVRMAKVA--KP--DELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFK-FLVENIHL 170 (278)
T ss_dssp TEEEEEETTTSCCCGGGHHHHHHHHHHC--CT--TCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHH-HHHHHHHH
T ss_pred CEEEEEeccceEEcCCcHHHHHHHHHhc--CC--CCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHH-HHHHHHHH
Confidence 3334443334556555554444555554 23 459999999999999888765 5889999885443 33444555
Q ss_pred cCCC--eEEEEcccccCCCCCCCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEE
Q 006905 255 RGVP--ALIGVLAAERLPYPSRAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILS 312 (626)
Q Consensus 255 rg~~--~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis 312 (626)
+++. +.+..+|+..++ ..+.||.|+++... ....+|..+.++|||||.+.+.
T Consensus 171 N~v~~~v~~~~~D~~~~~-~~~~~D~Vi~~~p~-----~~~~~l~~a~~~lk~gG~ih~~ 224 (278)
T 3k6r_A 171 NKVEDRMSAYNMDNRDFP-GENIADRILMGYVV-----RTHEFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp TTCTTTEEEECSCTTTCC-CCSCEEEEEECCCS-----SGGGGHHHHHHHEEEEEEEEEE
T ss_pred cCCCCcEEEEeCcHHHhc-cccCCCEEEECCCC-----cHHHHHHHHHHHcCCCCEEEEE
Confidence 6654 566667776665 35789999986532 2246788899999999998764
No 428
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.38 E-value=4.5e-07 Score=97.39 Aligned_cols=103 Identities=14% Similarity=-0.018 Sum_probs=74.2
Q ss_pred CCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCC--CeEEEEcccccCCC----CCCCeeEEEe
Q 006905 211 SIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGV--PALIGVLAAERLPY----PSRAFDMAHC 281 (626)
Q Consensus 211 ~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~--~~~~~v~d~~~Lpf----~d~sFDlV~~ 281 (626)
.+.+|||+|||+|.++..++.. .|+++|+++..+..+.. .+..+++ .+.+..+|+..+.. .+++||+|++
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~-n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKE-NAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHH-HHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-HHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 3568999999999999999886 58899998865554443 3444565 46777777654321 2568999999
Q ss_pred ccccccc--------cccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 282 SRCLIPW--------NQFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 282 ~~~l~h~--------~~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
....... ......++.++.++|+|||.++++..
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 336 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC 336 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 6533111 12236789999999999999999865
No 429
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.37 E-value=5e-07 Score=91.86 Aligned_cols=99 Identities=14% Similarity=0.000 Sum_probs=73.6
Q ss_pred CCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCCCCeeEEEecccccc
Q 006905 212 IRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPSRAFDMAHCSRCLIP 287 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h 287 (626)
..+|||||||.|.++..++.. .++++|+++.++.-.. +++...|++..+.+.|...-+ +.+.||+|+++-++++
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~-~~l~~~g~~~~~~v~D~~~~~-p~~~~DvaL~lkti~~ 210 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVD-EALTRLNVPHRTNVADLLEDR-LDEPADVTLLLKTLPC 210 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHH-HHHHHTTCCEEEEECCTTTSC-CCSCCSEEEETTCHHH
T ss_pred CceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHH-HHHHhcCCCceEEEeeecccC-CCCCcchHHHHHHHHH
Confidence 669999999999999888665 7899999776554333 333455788788777754444 4578999999999977
Q ss_pred ccccHHHHHHHHHhcccCCeEEEEE
Q 006905 288 WNQFGGIYLIEVDRVLRPGGYWILS 312 (626)
Q Consensus 288 ~~~~~~~~L~Ei~RvLKPGG~lvis 312 (626)
..+.....+.++...|+|+|.+|--
T Consensus 211 Le~q~kg~g~~ll~aL~~~~vvVSf 235 (281)
T 3lcv_B 211 LETQQRGSGWEVIDIVNSPNIVVTF 235 (281)
T ss_dssp HHHHSTTHHHHHHHHSSCSEEEEEE
T ss_pred hhhhhhHHHHHHHHHhCCCCEEEec
Confidence 6554433444999999999988754
No 430
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.37 E-value=6.3e-07 Score=91.97 Aligned_cols=138 Identities=18% Similarity=0.126 Sum_probs=87.4
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh-----cc-----------cceec-cccccCCCCCCc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER-----GL-----------VGTYT-NWCEAMSTYPRT 532 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r-----gl-----------i~~~~-~~~e~~~~yp~t 532 (626)
-++|||+|||.|+++..+++.+. .+|+.+|.++.+++.+.++ |+ +.+++ |-.+-+.. +++
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~--~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~ 152 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQHDV--DEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRG 152 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTSCC--SEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCC
T ss_pred CCeEEEEcCCcCHHHHHHHhCCC--CEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCC
Confidence 46899999999999999998853 4789999998999988876 32 12222 11111112 689
Q ss_pred cceeeeccccccCCCCCC--HHHHHHHhhhhccCCcEEEEEc-----ChHHHHHHHHHHHhCCCeeEEeec--CCCCCCc
Q 006905 533 YDLIHADSVFSLYKDRCE--TEDILLEMDRILRPEGGVIFRD-----DVDELVKVKRIIDALKWQSQIVDH--EDGPLER 603 (626)
Q Consensus 533 ~Dlih~~~~f~~~~~~c~--~~~~l~E~dRiLRPgG~~i~~d-----~~~~~~~~~~~~~~l~w~~~~~~~--e~~~~~~ 603 (626)
||+|.++.... ....-. ...++.++.|+|||||.+++.. ..+.+..+.+.++..--.+..... ..+ .+.
T Consensus 153 fD~Ii~d~~~~-~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~-~g~ 230 (281)
T 1mjf_A 153 FDVIIADSTDP-VGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKVFDRVYYYSFPVIGY-ASP 230 (281)
T ss_dssp EEEEEEECCCC-C-----TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHCSEEEEEEECCTTS-SSS
T ss_pred eeEEEECCCCC-CCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCceEEEEEecCCC-Cce
Confidence 99999865432 111111 2678999999999999999962 234445555544444333333221 111 234
Q ss_pred ceEEEEEec
Q 006905 604 EKLLFAVKL 612 (626)
Q Consensus 604 e~~l~~~K~ 612 (626)
..+++|.|.
T Consensus 231 ~~~~~as~~ 239 (281)
T 1mjf_A 231 WAFLVGVKG 239 (281)
T ss_dssp EEEEEEEES
T ss_pred EEEEEeeCC
Confidence 678899886
No 431
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.37 E-value=8.5e-07 Score=90.11 Aligned_cols=108 Identities=15% Similarity=0.146 Sum_probs=80.4
Q ss_pred ceeEEeccCchhhHhhhhhCC---CeEEEEeccCccCcccHHHHHHh----cc---cceec-cccccCCCCC-Cccceee
Q 006905 470 YRNILDMNAHLGGFAAALIDF---PVWVMNVVPAEAKINTLGVIYER----GL---VGTYT-NWCEAMSTYP-RTYDLIH 537 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~---~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~-~~~e~~~~yp-~t~Dlih 537 (626)
-.+|||+|||.|.++..|++. .. +|+.+|.++.+++.+.++ |+ +...+ |..+. +| .+||+|.
T Consensus 113 ~~~VLDiG~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~D~V~ 186 (277)
T 1o54_A 113 GDRIIDTGVGSGAMCAVLARAVGSSG---KVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG---FDEKDVDALF 186 (277)
T ss_dssp TCEEEEECCTTSHHHHHHHHHTTTTC---EEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC---CSCCSEEEEE
T ss_pred CCEEEEECCcCCHHHHHHHHHhCCCc---EEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc---ccCCccCEEE
Confidence 458999999999999999875 33 788999998999988776 43 23333 33332 45 7899998
Q ss_pred eccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh-HHHHHHHHHHHhCCCee
Q 006905 538 ADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV-DELVKVKRIIDALKWQS 591 (626)
Q Consensus 538 ~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~-~~~~~~~~~~~~l~w~~ 591 (626)
++ --+...+|.++.|+|||||.+++.+.. +.+.++.+.++...|..
T Consensus 187 ~~--------~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~~ 233 (277)
T 1o54_A 187 LD--------VPDPWNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFIR 233 (277)
T ss_dssp EC--------CSCGGGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEEE
T ss_pred EC--------CcCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCce
Confidence 83 123357899999999999999998764 46667777777666653
No 432
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.37 E-value=1.8e-07 Score=99.40 Aligned_cols=99 Identities=13% Similarity=0.177 Sum_probs=70.3
Q ss_pred CCceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcccceeccccccCCCCCCccceeeeccccccCCC
Q 006905 468 GRYRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGLVGTYTNWCEAMSTYPRTYDLIHADSVFSLYKD 547 (626)
Q Consensus 468 ~~~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgli~~~~~~~e~~~~yp~t~Dlih~~~~f~~~~~ 547 (626)
....+|||+|||.|.++.+|+++.- -..++.+|. +.+++.+.+..-+..... ..+..+|. ||+|.+..++.++.+
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~v~~~~~--d~~~~~~~-~D~v~~~~~lh~~~d 282 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYP-LIKGINFDL-PQVIENAPPLSGIEHVGG--DMFASVPQ-GDAMILKAVCHNWSD 282 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCCCTTEEEEEC--CTTTCCCC-EEEEEEESSGGGSCH
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCC-CCeEEEeCh-HHHHHhhhhcCCCEEEeC--CcccCCCC-CCEEEEecccccCCH
Confidence 4467899999999999999987521 125666777 477766554221232221 12234566 999999999988864
Q ss_pred CCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 548 RCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 548 ~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
. ....+|.++.|+|||||.++|.|
T Consensus 283 ~-~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 283 E-KCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp H-HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred H-HHHHHHHHHHHhcCCCCEEEEEE
Confidence 3 23489999999999999999974
No 433
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.36 E-value=1.3e-06 Score=89.43 Aligned_cols=143 Identities=14% Similarity=0.151 Sum_probs=90.9
Q ss_pred CceeEEeccCchhhHhhhhhCC-CeEEEEeccCccCcccHHHHHHh------cc----cceec-cccccCCCCCCcccee
Q 006905 469 RYRNILDMNAHLGGFAAALIDF-PVWVMNVVPAEAKINTLGVIYER------GL----VGTYT-NWCEAMSTYPRTYDLI 536 (626)
Q Consensus 469 ~~r~vlD~g~g~G~faa~l~~~-~v~~mnv~~~~~~~~~l~~~~~r------gl----i~~~~-~~~e~~~~yp~t~Dli 536 (626)
.-++|||+|||.|+++.++++. ++ ..|+.+|.++.+++++.++ ++ +.+++ |-.+-+...+++||+|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~I 152 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSV--KKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVI 152 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTC--SEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCC--ceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEE
Confidence 3578999999999999999987 44 3788888888899988875 22 22333 1111112235899999
Q ss_pred eeccccccCCC-CCCHHHHHHHhhhhccCCcEEEEEcC-----hHHHHHHHHHHHhCCCeeEEeecC--CCCCCcceEEE
Q 006905 537 HADSVFSLYKD-RCETEDILLEMDRILRPEGGVIFRDD-----VDELVKVKRIIDALKWQSQIVDHE--DGPLEREKLLF 608 (626)
Q Consensus 537 h~~~~f~~~~~-~c~~~~~l~E~dRiLRPgG~~i~~d~-----~~~~~~~~~~~~~l~w~~~~~~~e--~~~~~~e~~l~ 608 (626)
.++........ .-....++.++.|+|+|||.+++... .+....+.+.+++.=-.+...... .-+.+...+++
T Consensus 153 i~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~~~~ 232 (275)
T 1iy9_A 153 MVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITKLYTANIPTYPSGLWTFTI 232 (275)
T ss_dssp EESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEECCTTSGGGCEEEEE
T ss_pred EECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCCCeEEEEEecCcccCcceEEEE
Confidence 99654322111 11125789999999999999999732 334555555555553344433221 11123467889
Q ss_pred EEecc
Q 006905 609 AVKLY 613 (626)
Q Consensus 609 ~~K~~ 613 (626)
|.|++
T Consensus 233 ask~~ 237 (275)
T 1iy9_A 233 GSKKY 237 (275)
T ss_dssp EESSC
T ss_pred eeCCC
Confidence 99874
No 434
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.36 E-value=8.5e-07 Score=87.72 Aligned_cols=104 Identities=17% Similarity=0.189 Sum_probs=76.5
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhc----c---cceec-cccccCCCC-C-Cccceeeec
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERG----L---VGTYT-NWCEAMSTY-P-RTYDLIHAD 539 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rg----l---i~~~~-~~~e~~~~y-p-~t~Dlih~~ 539 (626)
-.+|||+|||.|.++..|++.+. +|+.+|.++.+++.+.++. + +...+ |..+ .. + +.||+|.++
T Consensus 92 ~~~vldiG~G~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~D~v~~~ 165 (248)
T 2yvl_A 92 EKRVLEFGTGSGALLAVLSEVAG---EVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKD---AEVPEGIFHAAFVD 165 (248)
T ss_dssp TCEEEEECCTTSHHHHHHHHHSS---EEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTT---SCCCTTCBSEEEEC
T ss_pred CCEEEEeCCCccHHHHHHHHhCC---EEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhh---cccCCCcccEEEEC
Confidence 45899999999999999988743 7899999989999888763 3 22332 2222 22 4 789999872
Q ss_pred cccccCCCCCCHHHHHHHhhhhccCCcEEEEEcC-hHHHHHHHHHHHhC
Q 006905 540 SVFSLYKDRCETEDILLEMDRILRPEGGVIFRDD-VDELVKVKRIIDAL 587 (626)
Q Consensus 540 ~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~-~~~~~~~~~~~~~l 587 (626)
--+...+|.++.|+|||||.+++... .+...++.+.++..
T Consensus 166 --------~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~ 206 (248)
T 2yvl_A 166 --------VREPWHYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENY 206 (248)
T ss_dssp --------SSCGGGGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTTT
T ss_pred --------CcCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh
Confidence 22446789999999999999999877 44556666655544
No 435
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.35 E-value=2.5e-07 Score=94.99 Aligned_cols=119 Identities=20% Similarity=0.302 Sum_probs=81.2
Q ss_pred chhhhHHHHHHHHHHHHhhhhcCCCCCceeEEeccCchhh----HhhhhhCC-C----eEEEEeccCccCcccHHHHHHh
Q 006905 443 FQQNSELWKKRLSYYKTMNNQLGQSGRYRNILDMNAHLGG----FAAALIDF-P----VWVMNVVPAEAKINTLGVIYER 513 (626)
Q Consensus 443 f~~d~~~w~~~v~~y~~~~~~~~~~~~~r~vlD~g~g~G~----faa~l~~~-~----v~~mnv~~~~~~~~~l~~~~~r 513 (626)
|-.|...|..-.+. +++. . . -..|+|+|||+|- +|..|++. + -| .|+++|.++++|+.|.+.
T Consensus 86 FfRd~~~f~~l~~~---llp~--~-~-~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~--~I~atDis~~~L~~Ar~~ 156 (274)
T 1af7_A 86 FFREAHHFPILAEH---ARRR--H-G-EYRVWSAAASTGEEPYSIAITLADALGMAPGRW--KVFASDIDTEVLEKARSG 156 (274)
T ss_dssp TTTTTTHHHHHHHH---HHHS--C-S-CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSE--EEEEEESCHHHHHHHHHT
T ss_pred ccCChHHHHHHHHH---ccCC--C-C-CcEEEEeeccCChhHHHHHHHHHHhcccCCCCe--EEEEEECCHHHHHHHHhc
Confidence 54555566543322 2332 1 2 3469999999997 66666543 2 13 899999999999998864
Q ss_pred cc-------------------------------------cc-eeccccccCCCCC--CccceeeeccccccCCCCCCHHH
Q 006905 514 GL-------------------------------------VG-TYTNWCEAMSTYP--RTYDLIHADSVFSLYKDRCETED 553 (626)
Q Consensus 514 gl-------------------------------------i~-~~~~~~e~~~~yp--~t~Dlih~~~~f~~~~~~c~~~~ 553 (626)
-. |. ..||+.+ .+|| ..||+|.|..++.+... -....
T Consensus 157 ~y~~~~~~~~~~~~~~~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~--~~~~~~~~fDlI~crnvliyf~~-~~~~~ 233 (274)
T 1af7_A 157 IYRLSELKTLSPQQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLLE--KQYNVPGPFDAIFCRNVMIYFDK-TTQED 233 (274)
T ss_dssp EEEGGGGTTSCHHHHHHHEEECCTTSCSEEEECHHHHTTEEEEECCTTC--SSCCCCCCEEEEEECSSGGGSCH-HHHHH
T ss_pred CCchhhhhcCCHHHHHHHhhccccCCCCceeechhhcccCeEEecccCC--CCCCcCCCeeEEEECCchHhCCH-HHHHH
Confidence 20 11 1234444 1344 78999999999887753 24478
Q ss_pred HHHHhhhhccCCcEEEEEcC
Q 006905 554 ILLEMDRILRPEGGVIFRDD 573 (626)
Q Consensus 554 ~l~E~dRiLRPgG~~i~~d~ 573 (626)
++.++.+.|||||++++...
T Consensus 234 vl~~~~~~L~pgG~L~lg~s 253 (274)
T 1af7_A 234 ILRRFVPLLKPDGLLFAGHS 253 (274)
T ss_dssp HHHHHGGGEEEEEEEEECTT
T ss_pred HHHHHHHHhCCCcEEEEEec
Confidence 99999999999999999644
No 436
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.34 E-value=6.4e-07 Score=91.74 Aligned_cols=120 Identities=9% Similarity=0.114 Sum_probs=82.5
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCcc-CcccHHHHHHhc---------c-------ccee-ccccccCCCC--
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEA-KINTLGVIYERG---------L-------VGTY-TNWCEAMSTY-- 529 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~-~~~~l~~~~~rg---------l-------i~~~-~~~~e~~~~y-- 529 (626)
-.+|||+|||+|.++..|+..+. ..|+.+|. ++.++..+.++. + +.+. .+|.+.....
T Consensus 80 ~~~vLDlG~G~G~~~~~~a~~~~--~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 80 GKTVCELGAGAGLVSIVAFLAGA--DQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TCEEEETTCTTSHHHHHHHHTTC--SEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred CCeEEEecccccHHHHHHHHcCC--CEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 35799999999999999988764 26899999 788998877653 1 2222 3576544333
Q ss_pred ---CCccceeeeccccccCCCCCCHHHHHHHhhhhcc---C--CcEEEEE-cC-h----HHHHHHHHHHHhCC-CeeEEe
Q 006905 530 ---PRTYDLIHADSVFSLYKDRCETEDILLEMDRILR---P--EGGVIFR-DD-V----DELVKVKRIIDALK-WQSQIV 594 (626)
Q Consensus 530 ---p~t~Dlih~~~~f~~~~~~c~~~~~l~E~dRiLR---P--gG~~i~~-d~-~----~~~~~~~~~~~~l~-w~~~~~ 594 (626)
+.+||+|.+..++.+.. +.+.+|.++.|+|+ | ||.+++. .. . +...++.+.++... |++...
T Consensus 158 ~~~~~~fD~Ii~~dvl~~~~---~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~~~~~~~~~~~l~~~G~f~v~~~ 234 (281)
T 3bzb_A 158 CTGLQRFQVVLLADLLSFHQ---AHDALLRSVKMLLALPANDPTAVALVTFTHHRPHLAERDLAFFRLVNADGALIAEPW 234 (281)
T ss_dssp HHSCSSBSEEEEESCCSCGG---GHHHHHHHHHHHBCCTTTCTTCEEEEEECC--------CTHHHHHHHHSTTEEEEEE
T ss_pred hccCCCCCEEEEeCcccChH---HHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecccchhHHHHHHHHHhcCCEEEEEe
Confidence 37999999877766543 46889999999999 9 9976553 22 1 11334445556666 666543
No 437
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.34 E-value=4.6e-06 Score=80.31 Aligned_cols=117 Identities=11% Similarity=0.091 Sum_probs=87.4
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc-----cceeccccccCCCCCCccceeeecccccc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL-----VGTYTNWCEAMSTYPRTYDLIHADSVFSL 544 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl-----i~~~~~~~e~~~~yp~t~Dlih~~~~f~~ 544 (626)
-.+|||+|||.|.++.+|++.+. -+|+.+|.++.+++.+.++-- +.+++ ..+..+|.+||+|.++..|..
T Consensus 50 ~~~vlD~g~G~G~~~~~l~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~---~d~~~~~~~~D~v~~~~p~~~ 124 (207)
T 1wy7_A 50 GKVVADLGAGTGVLSYGALLLGA--KEVICVEVDKEAVDVLIENLGEFKGKFKVFI---GDVSEFNSRVDIVIMNPPFGS 124 (207)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHTGGGTTSEEEEE---SCGGGCCCCCSEEEECCCCSS
T ss_pred cCEEEEeeCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHcCCCEEEEE---CchHHcCCCCCEEEEcCCCcc
Confidence 45899999999999999998853 268999999999998887632 23333 444556789999999988876
Q ss_pred CCCCCCHHHHHHHhhhhccCCcEEEEE-cChHHHHHHHHHHHhCCCeeEEe
Q 006905 545 YKDRCETEDILLEMDRILRPEGGVIFR-DDVDELVKVKRIIDALKWQSQIV 594 (626)
Q Consensus 545 ~~~~c~~~~~l~E~dRiLRPgG~~i~~-d~~~~~~~~~~~~~~l~w~~~~~ 594 (626)
.... ....+|.++.|+| ||.+++. ...+....+.+++....|++...
T Consensus 125 ~~~~-~~~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 172 (207)
T 1wy7_A 125 QRKH-ADRPFLLKAFEIS--DVVYSIHLAKPEVRRFIEKFSWEHGFVVTHR 172 (207)
T ss_dssp SSTT-TTHHHHHHHHHHC--SEEEEEEECCHHHHHHHHHHHHHTTEEEEEE
T ss_pred ccCC-chHHHHHHHHHhc--CcEEEEEeCCcCCHHHHHHHHHHCCCeEEEE
Confidence 6543 3367889999999 6655444 26667778888888888877643
No 438
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.33 E-value=2.8e-07 Score=96.03 Aligned_cols=93 Identities=17% Similarity=0.025 Sum_probs=68.8
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc--cceeccccccCCC-C--CCccceeeecc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL--VGTYTNWCEAMST-Y--PRTYDLIHADS 540 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl--i~~~~~~~e~~~~-y--p~t~Dlih~~~ 540 (626)
-.+|||+|||.|.++..|++...-..+|+.+|.++++++.+.++ |+ +.+.+ ..+.. . ..+||+|.+..
T Consensus 76 ~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~---~d~~~~~~~~~~fD~Iv~~~ 152 (317)
T 1dl5_A 76 GMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVC---GDGYYGVPEFSPYDVIFVTV 152 (317)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE---SCGGGCCGGGCCEEEEEECS
T ss_pred cCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEE---CChhhccccCCCeEEEEEcC
Confidence 45899999999999999987522012588999999999988876 44 23332 22222 2 27899999998
Q ss_pred ccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh
Q 006905 541 VFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV 574 (626)
Q Consensus 541 ~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~ 574 (626)
++.+.. .++.|+|||||.+++....
T Consensus 153 ~~~~~~---------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 153 GVDEVP---------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp BBSCCC---------HHHHHHEEEEEEEEEEBCB
T ss_pred CHHHHH---------HHHHHhcCCCcEEEEEECC
Confidence 887654 5788999999999997543
No 439
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.33 E-value=4e-07 Score=99.98 Aligned_cols=110 Identities=17% Similarity=0.138 Sum_probs=73.2
Q ss_pred HHhhccCCCCCCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcCCC-eEEEEcccccCC-CCCC
Q 006905 202 GKLINLNDGSIRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERGVP-ALIGVLAAERLP-YPSR 274 (626)
Q Consensus 202 ~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg~~-~~~~v~d~~~Lp-f~d~ 274 (626)
..++...+ +.+|||+|||+|..+..|++. .|+++|+++..+.... +.+...|+. +.+...|...++ +.++
T Consensus 98 ~~~L~~~~--g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~-~n~~r~g~~nv~v~~~Da~~l~~~~~~ 174 (456)
T 3m4x_A 98 GTAAAAKP--GEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILS-ENIERWGVSNAIVTNHAPAELVPHFSG 174 (456)
T ss_dssp HHHHCCCT--TCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHH-HHHHHHTCSSEEEECCCHHHHHHHHTT
T ss_pred HHHcCCCC--CCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHH-HHHHHcCCCceEEEeCCHHHhhhhccc
Confidence 34444333 559999999999998888864 4889999875554333 334444654 556666665554 3357
Q ss_pred CeeEEEeccc------ccc-------ccc--------cHHHHHHHHHhcccCCeEEEEEeC
Q 006905 275 AFDMAHCSRC------LIP-------WNQ--------FGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 275 sFDlV~~~~~------l~h-------~~~--------~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+||+|++... +.. |.. ....+|.++.++|||||.|++++-
T Consensus 175 ~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTC 235 (456)
T 3m4x_A 175 FFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTC 235 (456)
T ss_dssp CEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred cCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 8999997432 100 111 112789999999999999999864
No 440
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.33 E-value=1.1e-06 Score=90.86 Aligned_cols=142 Identities=15% Similarity=0.069 Sum_probs=87.3
Q ss_pred ceeEEeccCchhhHhhhhhCC-CeEEEEeccCccCcccHHHHHHhc------c----cceec-cccccCCCCCCccceee
Q 006905 470 YRNILDMNAHLGGFAAALIDF-PVWVMNVVPAEAKINTLGVIYERG------L----VGTYT-NWCEAMSTYPRTYDLIH 537 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~-~v~~mnv~~~~~~~~~l~~~~~rg------l----i~~~~-~~~e~~~~yp~t~Dlih 537 (626)
-.+|||+|||.|+++..+++. ++ .+|+.+|.++.+++++.++- + +.+++ |..+.+...+++||+|.
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDSV--EKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTTC--SEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcCCC--CEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 478999999999999999987 43 37889999989999887752 2 22232 21111222358899999
Q ss_pred eccccccCCC--CCCHHHHHHHhhhhccCCcEEEEEcC-----hHHHHHHHHHHHhCCCeeEEeecC--CCCCCcceEEE
Q 006905 538 ADSVFSLYKD--RCETEDILLEMDRILRPEGGVIFRDD-----VDELVKVKRIIDALKWQSQIVDHE--DGPLEREKLLF 608 (626)
Q Consensus 538 ~~~~f~~~~~--~c~~~~~l~E~dRiLRPgG~~i~~d~-----~~~~~~~~~~~~~l~w~~~~~~~e--~~~~~~e~~l~ 608 (626)
++..-..... .-....++.++.|+|||||.+++.-. .+....+.+.+++.--.+...... .-|.+...+++
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f~~ 248 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFPITRVYLGFMTTYPSGMWSYTF 248 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCSEEEEEEEECTTSTTSEEEEEE
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCCceEEEEeecCccCCCceEEEE
Confidence 8532210111 00126789999999999999999621 233444444444433344433211 11224567889
Q ss_pred EEecc
Q 006905 609 AVKLY 613 (626)
Q Consensus 609 ~~K~~ 613 (626)
|.|++
T Consensus 249 as~~~ 253 (296)
T 1inl_A 249 ASKGI 253 (296)
T ss_dssp EESSC
T ss_pred ecCCC
Confidence 99974
No 441
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.32 E-value=1.8e-06 Score=83.04 Aligned_cols=113 Identities=11% Similarity=0.008 Sum_probs=78.2
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhcc-cceeccccccCCCCCCccceeeeccccccCCCC
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERGL-VGTYTNWCEAMSTYPRTYDLIHADSVFSLYKDR 548 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgl-i~~~~~~~e~~~~yp~t~Dlih~~~~f~~~~~~ 548 (626)
-.+|||+|||.|.++.+|++.+. ..|+.+|.++.+++.+.++-- +.+++ ..+..+|.+||+|.++..|.+....
T Consensus 52 ~~~vlD~gcG~G~~~~~l~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~---~d~~~~~~~~D~v~~~~p~~~~~~~ 126 (200)
T 1ne2_A 52 GRSVIDAGTGNGILACGSYLLGA--ESVTAFDIDPDAIETAKRNCGGVNFMV---ADVSEISGKYDTWIMNPPFGSVVKH 126 (200)
T ss_dssp TSEEEEETCTTCHHHHHHHHTTB--SEEEEEESCHHHHHHHHHHCTTSEEEE---CCGGGCCCCEEEEEECCCC------
T ss_pred CCEEEEEeCCccHHHHHHHHcCC--CEEEEEECCHHHHHHHHHhcCCCEEEE---CcHHHCCCCeeEEEECCCchhccCc
Confidence 46899999999999999988854 268999999999999988742 23333 3344467899999999999877653
Q ss_pred CCHHHHHHHhhhhccCCcEEEEEcChHHHHHHHHHHHhCCCeeE
Q 006905 549 CETEDILLEMDRILRPEGGVIFRDDVDELVKVKRIIDALKWQSQ 592 (626)
Q Consensus 549 c~~~~~l~E~dRiLRPgG~~i~~d~~~~~~~~~~~~~~l~w~~~ 592 (626)
.. ..++.++-|+| |+.+++. .......+.+++.... ++.
T Consensus 127 ~~-~~~l~~~~~~~--g~~~~~~-~~~~~~~~~~~~~~~g-~~~ 165 (200)
T 1ne2_A 127 SD-RAFIDKAFETS--MWIYSIG-NAKARDFLRREFSARG-DVF 165 (200)
T ss_dssp -C-HHHHHHHHHHE--EEEEEEE-EGGGHHHHHHHHHHHE-EEE
T ss_pred hh-HHHHHHHHHhc--CcEEEEE-cCchHHHHHHHHHHCC-CEE
Confidence 22 57889999998 5544444 4455667777766665 444
No 442
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.32 E-value=1.2e-06 Score=91.44 Aligned_cols=119 Identities=15% Similarity=0.142 Sum_probs=78.4
Q ss_pred ceeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHHHh----cc--cceeccccccCCCCCCccceeeeccc
Q 006905 470 YRNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIYER----GL--VGTYTNWCEAMSTYPRTYDLIHADSV 541 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~r----gl--i~~~~~~~e~~~~yp~t~Dlih~~~~ 541 (626)
-.+|||+|||.|+++..|++. +- ..|+.+|.++.++..+.++ |+ +.+++.=.+.+..++.+||+|.++--
T Consensus 119 g~~VLDlg~G~G~~t~~la~~~~~~--~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~P 196 (315)
T 1ixk_A 119 GEIVADMAAAPGGKTSYLAQLMRND--GVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDAP 196 (315)
T ss_dssp TCEEEECCSSCSHHHHHHHHHTTTC--SEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEECC
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCC--CEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeCC
Confidence 457999999999999999863 11 1588999998999888776 44 23333212233334578999998543
Q ss_pred cccCC---CCC------C----------HHHHHHHhhhhccCCcEEEEEc----ChHHHHHHHHHHHhCCCe
Q 006905 542 FSLYK---DRC------E----------TEDILLEMDRILRPEGGVIFRD----DVDELVKVKRIIDALKWQ 590 (626)
Q Consensus 542 f~~~~---~~c------~----------~~~~l~E~dRiLRPgG~~i~~d----~~~~~~~~~~~~~~l~w~ 590 (626)
.+... ..- . ...+|.++.|+|||||.++++. ..+....++.+++...++
T Consensus 197 csg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~~~ 268 (315)
T 1ixk_A 197 CTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFDVE 268 (315)
T ss_dssp TTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEE
T ss_pred CCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCCCE
Confidence 32111 000 0 1478999999999999999963 223444566777766544
No 443
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.32 E-value=1.1e-06 Score=88.97 Aligned_cols=108 Identities=17% Similarity=0.233 Sum_probs=76.3
Q ss_pred ceeEEeccCchhhHhhhhhCC---CeEEEEeccCccCcccHHHHHHh-----c-c---cceec-cccccCCCCC-Cccce
Q 006905 470 YRNILDMNAHLGGFAAALIDF---PVWVMNVVPAEAKINTLGVIYER-----G-L---VGTYT-NWCEAMSTYP-RTYDL 535 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~---~v~~mnv~~~~~~~~~l~~~~~r-----g-l---i~~~~-~~~e~~~~yp-~t~Dl 535 (626)
-.+|||+|||.|.++.+|++. +. +|+.+|.++.+++.+.++ | + +.+.+ |..+. .++ .+||+
T Consensus 100 ~~~vLdiG~G~G~~~~~l~~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~--~~~~~~~D~ 174 (280)
T 1i9g_A 100 GARVLEAGAGSGALTLSLLRAVGPAG---QVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS--ELPDGSVDR 174 (280)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTS---EEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC--CCCTTCEEE
T ss_pred CCEEEEEcccccHHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc--CCCCCceeE
Confidence 457999999999999999874 33 788999998999988776 4 2 23333 22221 243 78999
Q ss_pred eeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcC-hHHHHHHHHHHHh-CCCe
Q 006905 536 IHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDD-VDELVKVKRIIDA-LKWQ 590 (626)
Q Consensus 536 ih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~-~~~~~~~~~~~~~-l~w~ 590 (626)
|.++. -+...+|.++.|+|||||.+++... .+.+.++...+.. ..|.
T Consensus 175 v~~~~--------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~~f~ 223 (280)
T 1i9g_A 175 AVLDM--------LAPWEVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCWT 223 (280)
T ss_dssp EEEES--------SCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHSSBC
T ss_pred EEECC--------cCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcCCcC
Confidence 98821 2445789999999999999999764 3455555554444 5553
No 444
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.32 E-value=7.6e-07 Score=93.93 Aligned_cols=101 Identities=17% Similarity=0.184 Sum_probs=71.6
Q ss_pred CceeEEeccCchhhHhhhhhCC-CeEEEEeccCccCcccHHHHHHh------cc----cceec-cccccCCCCC-Cccce
Q 006905 469 RYRNILDMNAHLGGFAAALIDF-PVWVMNVVPAEAKINTLGVIYER------GL----VGTYT-NWCEAMSTYP-RTYDL 535 (626)
Q Consensus 469 ~~r~vlD~g~g~G~faa~l~~~-~v~~mnv~~~~~~~~~l~~~~~r------gl----i~~~~-~~~e~~~~yp-~t~Dl 535 (626)
.-++|||+|||.|+++..|++. ++ .+|+.+|.++.+++++.++ |+ +.+++ |+.+.+..++ .+||+
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~--~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASI--EQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTC--CEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCC--CEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccE
Confidence 3578999999999999999987 33 3789999999999988775 33 22333 3332223344 79999
Q ss_pred eeeccccccCCCCC-CHHHHHHHhhhhccCCcEEEEE
Q 006905 536 IHADSVFSLYKDRC-ETEDILLEMDRILRPEGGVIFR 571 (626)
Q Consensus 536 ih~~~~f~~~~~~c-~~~~~l~E~dRiLRPgG~~i~~ 571 (626)
|.++..-....... ....++.++.|+|||||.+++.
T Consensus 198 Ii~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 198 VIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 99864321111110 1368999999999999999996
No 445
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.30 E-value=8.9e-07 Score=84.39 Aligned_cols=137 Identities=18% Similarity=0.157 Sum_probs=73.1
Q ss_pred ceeEEeccCchhhHhhhhhCC-CeE-------EEEeccCccCcccHHHHHHhccccee-c-ccccc-C-----CCCC-Cc
Q 006905 470 YRNILDMNAHLGGFAAALIDF-PVW-------VMNVVPAEAKINTLGVIYERGLVGTY-T-NWCEA-M-----STYP-RT 532 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~-~v~-------~mnv~~~~~~~~~l~~~~~rgli~~~-~-~~~e~-~-----~~yp-~t 532 (626)
-.+|||+|||.|.++..|++. +.- ...|+.+|.++.. .. + + +..+ + |..+. . ..++ ++
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-~~--~-~-~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-PL--E-G-ATFLCPADVTDPRTSQRILEVLPGRR 97 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-CC--T-T-CEEECSCCTTSHHHHHHHHHHSGGGC
T ss_pred CCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-cC--C-C-CeEEEeccCCCHHHHHHHHHhcCCCC
Confidence 368999999999999999876 310 0167888887422 10 1 1 1222 1 11100 0 0134 68
Q ss_pred cceeeeccccccCCCC--------CCHHHHHHHhhhhccCCcEEEEEcCh-HHHHHHHHHHHhCCCeeEEeecC-CCCCC
Q 006905 533 YDLIHADSVFSLYKDR--------CETEDILLEMDRILRPEGGVIFRDDV-DELVKVKRIIDALKWQSQIVDHE-DGPLE 602 (626)
Q Consensus 533 ~Dlih~~~~f~~~~~~--------c~~~~~l~E~dRiLRPgG~~i~~d~~-~~~~~~~~~~~~l~w~~~~~~~e-~~~~~ 602 (626)
||+|.|+..+...... .....+|.++.|+|||||.+++.+-. +....+...++..--++.++... ..+..
T Consensus 98 fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~f~~v~~~~~~~~~~~~ 177 (196)
T 2nyu_A 98 ADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLTEEFQNVRIIKPEASRKES 177 (196)
T ss_dssp EEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGGGHHHHHHHHHHEEEEEEECCC------
T ss_pred CcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCccHHHHHHHHHHHhcceEEECCcccCccC
Confidence 9999997655432211 01146899999999999999998432 22334444444332222332211 11224
Q ss_pred cceEEEEEe
Q 006905 603 REKLLFAVK 611 (626)
Q Consensus 603 ~e~~l~~~K 611 (626)
.|..+++..
T Consensus 178 ~e~~~v~~g 186 (196)
T 2nyu_A 178 SEVYFLATQ 186 (196)
T ss_dssp --EEEEEEE
T ss_pred ceEEEEeee
Confidence 577777654
No 446
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.29 E-value=2.3e-07 Score=91.00 Aligned_cols=93 Identities=15% Similarity=0.124 Sum_probs=65.1
Q ss_pred ceeEEeccCchhhHhhhhhCC-CeEEEEeccCccCcccHHHHHHhcc-----------cceec-cccccCCCCCCcccee
Q 006905 470 YRNILDMNAHLGGFAAALIDF-PVWVMNVVPAEAKINTLGVIYERGL-----------VGTYT-NWCEAMSTYPRTYDLI 536 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~-~v~~mnv~~~~~~~~~l~~~~~rgl-----------i~~~~-~~~e~~~~yp~t~Dli 536 (626)
-.+|||+|||.|.++..|++. +- ..+|+.+|.++.+++.+.++.- +.+.+ |..+. ..-+.+||+|
T Consensus 78 ~~~vLDiG~G~G~~~~~la~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~i 155 (226)
T 1i1n_A 78 GAKALDVGSGSGILTACFARMVGC-TGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG-YAEEAPYDAI 155 (226)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC-CGGGCCEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHHhCC-CcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC-cccCCCcCEE
Confidence 458999999999999999865 10 0168899999899988866521 22222 22211 1112789999
Q ss_pred eeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcC
Q 006905 537 HADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDD 573 (626)
Q Consensus 537 h~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~ 573 (626)
++...+.+ ++.++.|+|||||.+++...
T Consensus 156 ~~~~~~~~---------~~~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 156 HVGAAAPV---------VPQALIDQLKPGGRLILPVG 183 (226)
T ss_dssp EECSBBSS---------CCHHHHHTEEEEEEEEEEES
T ss_pred EECCchHH---------HHHHHHHhcCCCcEEEEEEe
Confidence 99766632 45688999999999999754
No 447
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.29 E-value=5.6e-07 Score=95.71 Aligned_cols=98 Identities=14% Similarity=0.174 Sum_probs=71.4
Q ss_pred CCceeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHHHhcccceeccccccCCCCCCccceeeeccccccC
Q 006905 468 GRYRNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIYERGLVGTYTNWCEAMSTYPRTYDLIHADSVFSLY 545 (626)
Q Consensus 468 ~~~r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~rgli~~~~~~~e~~~~yp~t~Dlih~~~~f~~~ 545 (626)
....+|||+|||.|.++..|+++ ++ .++.+|.+ .+++.+.++.-+..... ..|.++|.. |+|.+..+++++
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~~-~~~~~a~~~~~v~~~~~--D~~~~~p~~-D~v~~~~vlh~~ 272 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTI---KGVNFDLP-HVISEAPQFPGVTHVGG--DMFKEVPSG-DTILMKWILHDW 272 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTC---EEEEEECH-HHHTTCCCCTTEEEEEC--CTTTCCCCC-SEEEEESCGGGS
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCC---eEEEecCH-HHHHhhhhcCCeEEEeC--CcCCCCCCC-CEEEehHHhccC
Confidence 55789999999999999999874 33 45666773 66665554432333331 223356755 999999999988
Q ss_pred CCCCCHHHHHHHhhhhccCCcEEEEEcC
Q 006905 546 KDRCETEDILLEMDRILRPEGGVIFRDD 573 (626)
Q Consensus 546 ~~~c~~~~~l~E~dRiLRPgG~~i~~d~ 573 (626)
.+. +...+|.++.|+|||||+++|.|.
T Consensus 273 ~d~-~~~~~L~~~~~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 273 SDQ-HCATLLKNCYDALPAHGKVVLVQC 299 (364)
T ss_dssp CHH-HHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred CHH-HHHHHHHHHHHHcCCCCEEEEEEe
Confidence 643 456899999999999999999753
No 448
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.29 E-value=1.5e-06 Score=91.83 Aligned_cols=137 Identities=18% Similarity=0.127 Sum_probs=88.1
Q ss_pred CCceeEEeccCchhhHhhhhhCCC---eEEEEeccCccCcccHHHHHHh----cc--cceeccccccCCCCCCccceeee
Q 006905 468 GRYRNILDMNAHLGGFAAALIDFP---VWVMNVVPAEAKINTLGVIYER----GL--VGTYTNWCEAMSTYPRTYDLIHA 538 (626)
Q Consensus 468 ~~~r~vlD~g~g~G~faa~l~~~~---v~~mnv~~~~~~~~~l~~~~~r----gl--i~~~~~~~e~~~~yp~t~Dlih~ 538 (626)
..-..|||+|||+|+++..++... . +|+.+|.++.+++.+.++ |+ |.+.+.=.+.+......||+|.+
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~~~~~~---~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~ 278 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAASTLGPTS---PVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILA 278 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHHHCTTS---CEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEE
T ss_pred CCCCEEEeCCCCcCHHHHHHHHhhCCCc---eEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEE
Confidence 345689999999999998887642 4 688999999999988765 43 33343212222222267999999
Q ss_pred ccccccCCC-CCC----HHHHHHHhhhhccCCcEEEEEcChHHHHHHHHHHHhCCCeeEEe-ecCCCCCCcceEEEEEe
Q 006905 539 DSVFSLYKD-RCE----TEDILLEMDRILRPEGGVIFRDDVDELVKVKRIIDALKWQSQIV-DHEDGPLEREKLLFAVK 611 (626)
Q Consensus 539 ~~~f~~~~~-~c~----~~~~l~E~dRiLRPgG~~i~~d~~~~~~~~~~~~~~l~w~~~~~-~~e~~~~~~e~~l~~~K 611 (626)
+--|..-.. .-. ...++.++.|+|||||.+++...... -++.+.+ ..|+.... ...+|... -.|++++|
T Consensus 279 npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~~--~~~~~~~-~g~~~~~~~~l~~g~l~-~~i~vl~r 353 (354)
T 3tma_A 279 NPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRPA--LLKRALP-PGFALRHARVVEQGGVY-PRVFVLEK 353 (354)
T ss_dssp CCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCHH--HHHHHCC-TTEEEEEEEECCBTTBC-CEEEEEEE
T ss_pred CCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCHH--HHHHHhh-cCcEEEEEEEEEeCCEE-EEEEEEEc
Confidence 776653211 111 25689999999999999998755432 2445555 77766422 22344433 45677665
No 449
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.29 E-value=1.8e-06 Score=92.57 Aligned_cols=108 Identities=16% Similarity=0.173 Sum_probs=76.0
Q ss_pred HHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC-----CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccC
Q 006905 195 DAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR-----NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERL 269 (626)
Q Consensus 195 ~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~-----~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~L 269 (626)
....+.+.+.+.. ....+|||+|||+|.++..++++ .++++|+++..+..+ ..+.+...|....
T Consensus 25 ~~l~~~~~~~~~~--~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~~~~~~~~D~~~~ 93 (421)
T 2ih2_A 25 PEVVDFMVSLAEA--PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------PWAEGILADFLLW 93 (421)
T ss_dssp HHHHHHHHHHCCC--CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------TTEEEEESCGGGC
T ss_pred HHHHHHHHHhhcc--CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------CCCcEEeCChhhc
Confidence 4455666666643 22448999999999999998863 689999988654322 3456777776665
Q ss_pred CCCCCCeeEEEeccccccccc---------cH-------------------HHHHHHHHhcccCCeEEEEEeC
Q 006905 270 PYPSRAFDMAHCSRCLIPWNQ---------FG-------------------GIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 270 pf~d~sFDlV~~~~~l~h~~~---------~~-------------------~~~L~Ei~RvLKPGG~lvis~p 314 (626)
+ +.+.||+|+++..+..... +. ..++..+.++|+|||.+++..|
T Consensus 94 ~-~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p 165 (421)
T 2ih2_A 94 E-PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVP 165 (421)
T ss_dssp C-CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred C-ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 4 3468999999754422111 11 2568899999999999999876
No 450
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.29 E-value=2e-06 Score=92.01 Aligned_cols=102 Identities=19% Similarity=0.194 Sum_probs=69.6
Q ss_pred CCEEEEeCCCCchHHHHHhh-------------------CCcEEEeCCccchHHHHHHHHHHc--------------CCC
Q 006905 212 IRTAIDTGCGVASWGAYLLS-------------------RNIITMSFAPRDTHEAQVQFALER--------------GVP 258 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~-------------------~~V~avdis~~dls~a~i~~A~er--------------g~~ 258 (626)
.-+|+|+|||+|..+..+.. -.|...|+...|.+.-...+.... +.-
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 46899999999987776621 146677888888765544433210 011
Q ss_pred eEEEEcc-cccCCCCCCCeeEEEecccccccccc--------------------------------------HHHHHHHH
Q 006905 259 ALIGVLA-AERLPYPSRAFDMAHCSRCLIPWNQF--------------------------------------GGIYLIEV 299 (626)
Q Consensus 259 ~~~~v~d-~~~Lpf~d~sFDlV~~~~~l~h~~~~--------------------------------------~~~~L~Ei 299 (626)
....+.. ...-.||+++||+|+++.+| ||..+ ...+|+..
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aL-HWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSL-HWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCT-TBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEeccee-eeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 2223333 23345889999999999999 88652 23468889
Q ss_pred HhcccCCeEEEEEeC
Q 006905 300 DRVLRPGGYWILSGP 314 (626)
Q Consensus 300 ~RvLKPGG~lvis~p 314 (626)
.|.|+|||.++++..
T Consensus 212 a~eL~pGG~mvl~~~ 226 (374)
T 3b5i_A 212 AAEVKRGGAMFLVCL 226 (374)
T ss_dssp HHHEEEEEEEEEEEE
T ss_pred HHHhCCCCEEEEEEe
Confidence 999999999999854
No 451
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.28 E-value=1.8e-06 Score=90.35 Aligned_cols=141 Identities=13% Similarity=0.116 Sum_probs=83.4
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh------cc----cceec-cccccCCCCCCccceeee
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER------GL----VGTYT-NWCEAMSTYPRTYDLIHA 538 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r------gl----i~~~~-~~~e~~~~yp~t~Dlih~ 538 (626)
-++|||+|||.|+++..|++.. -..+|+.+|.++.+++++.++ |+ +.+++ |..+.+..-+++||+|.+
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHE-SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCT-TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 4789999999999999999872 124788999998999998876 22 22222 211111122489999998
Q ss_pred ccccccCC-CCCCH-HHHHHHhhhhccCCcEEEEEcC-----hHHHHHHHHHHHhCCCeeEEeec--CCCCCCcceEEEE
Q 006905 539 DSVFSLYK-DRCET-EDILLEMDRILRPEGGVIFRDD-----VDELVKVKRIIDALKWQSQIVDH--EDGPLEREKLLFA 609 (626)
Q Consensus 539 ~~~f~~~~-~~c~~-~~~l~E~dRiLRPgG~~i~~d~-----~~~~~~~~~~~~~l~w~~~~~~~--e~~~~~~e~~l~~ 609 (626)
+.. .... ..-.. ..++.++.|+|||||.+++... .+....+.+.++.+-=.+..... ...+.+.-.+++|
T Consensus 188 d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~vF~~v~~~~~~iP~~~~g~~g~~~a 266 (314)
T 2b2c_A 188 DSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRKIFPAVTYAQSIVSTYPSGSMGYLIC 266 (314)
T ss_dssp CCC--------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGEEEEEEE
T ss_pred cCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHHHCCcceEEEEEecCcCCCceEEEEE
Confidence 543 2221 11112 6789999999999999999641 23344444444444333433221 1111112258888
Q ss_pred Eec
Q 006905 610 VKL 612 (626)
Q Consensus 610 ~K~ 612 (626)
.|.
T Consensus 267 sk~ 269 (314)
T 2b2c_A 267 AKN 269 (314)
T ss_dssp ESS
T ss_pred eCC
Confidence 886
No 452
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.28 E-value=8.8e-07 Score=88.35 Aligned_cols=94 Identities=9% Similarity=0.076 Sum_probs=68.5
Q ss_pred ceeEEeccCchhhHhhhhhCC---CeEEEEeccCccCcccHHHHHHh----cc---cceec-cccccCCCC------CCc
Q 006905 470 YRNILDMNAHLGGFAAALIDF---PVWVMNVVPAEAKINTLGVIYER----GL---VGTYT-NWCEAMSTY------PRT 532 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~---~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~-~~~e~~~~y------p~t 532 (626)
-++|||+|||.|..+..|++. +. .|+.+|.++.+++++.++ |+ |.+.+ |..+.+..+ +.+
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~---~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 147 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDG---KITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGS 147 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTC---EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTC
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCC
Confidence 468999999999999999764 33 688899998899887654 54 33333 233322223 478
Q ss_pred cceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 533 YDLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 533 ~Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
||+|.++.. .-+...++.++.|+|||||.+++.+
T Consensus 148 fD~I~~d~~------~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 148 YDFGFVDAD------KPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEEEECSC------GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cCEEEECCc------hHHHHHHHHHHHHhcCCCeEEEEec
Confidence 999998532 2245789999999999999999964
No 453
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.28 E-value=9.8e-07 Score=92.96 Aligned_cols=120 Identities=15% Similarity=0.064 Sum_probs=79.5
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc----cceeccccccCCC-C---CCccceee
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL----VGTYTNWCEAMST-Y---PRTYDLIH 537 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl----i~~~~~~~e~~~~-y---p~t~Dlih 537 (626)
-.+|||+|||+|+|+.+++..+. .|+.+|.++.+++.+.++ |+ +.+++.=+..+.. . .++||+|.
T Consensus 154 ~~~VLDlgcGtG~~sl~la~~ga---~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAAAAGA---EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC---EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCcEEEcccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 45799999999999999999876 799999999999988765 33 2233311111111 1 36899998
Q ss_pred eccc-cccCCC------CCCHHHHHHHhhhhccCCcEEEEEcC------h-HHHHHHHHHHHhCCCeeE
Q 006905 538 ADSV-FSLYKD------RCETEDILLEMDRILRPEGGVIFRDD------V-DELVKVKRIIDALKWQSQ 592 (626)
Q Consensus 538 ~~~~-f~~~~~------~c~~~~~l~E~dRiLRPgG~~i~~d~------~-~~~~~~~~~~~~l~w~~~ 592 (626)
++-- |..... .-++..++.++.|+|+|||.+++... . .....+++.++....++.
T Consensus 231 ~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp ECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEE
T ss_pred ECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 8543 221110 11356799999999999999877532 1 234444545556666654
No 454
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.27 E-value=4.7e-06 Score=85.12 Aligned_cols=121 Identities=15% Similarity=0.110 Sum_probs=75.5
Q ss_pred CCCcHHHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC----CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcc
Q 006905 190 FPNGADAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR----NIITMSFAPRDTHEAQVQFALERGVPALIGVLA 265 (626)
Q Consensus 190 F~~ga~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~----~V~avdis~~dls~a~i~~A~erg~~~~~~v~d 265 (626)
|...+...+.+|.+...+.+ ..+|||||||+|.|+.+++++ .+.++++.. |+....+.. ...+.++.....+
T Consensus 55 YrSRaA~KL~ei~ek~~l~~--~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGv-Dl~~~pi~~-~~~g~~ii~~~~~ 130 (277)
T 3evf_A 55 AVSRGTAKLRWFHERGYVKL--EGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGR-DGHEKPMNV-QSLGWNIITFKDK 130 (277)
T ss_dssp CSSTHHHHHHHHHHTTSSCC--CEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCC-TTCCCCCCC-CBTTGGGEEEECS
T ss_pred ccccHHHHHHHHHHhCCCCC--CCEEEEecCCCCHHHHHHHHhcCCCcceeEEEec-cCccccccc-CcCCCCeEEEecc
Confidence 44555555556665533333 458999999999999988765 456677753 321100000 0112234444444
Q ss_pred cccCCCCCCCeeEEEeccccc---cccccHH--HHHHHHHhcccCC-eEEEEEeC
Q 006905 266 AERLPYPSRAFDMAHCSRCLI---PWNQFGG--IYLIEVDRVLRPG-GYWILSGP 314 (626)
Q Consensus 266 ~~~Lpf~d~sFDlV~~~~~l~---h~~~~~~--~~L~Ei~RvLKPG-G~lvis~p 314 (626)
++...++.+.||+|+|..+.+ ++.+... .+|..+.++|+|| |.|++...
T Consensus 131 ~dv~~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf 185 (277)
T 3evf_A 131 TDIHRLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVL 185 (277)
T ss_dssp CCTTTSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEES
T ss_pred ceehhcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEec
Confidence 455567788999999987553 2333321 3578889999999 99999754
No 455
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.26 E-value=1.7e-06 Score=90.61 Aligned_cols=142 Identities=17% Similarity=0.153 Sum_probs=89.8
Q ss_pred ceeEEeccCchhhHhhhhhCC-CeEEEEeccCccCcccHHHHHHhc------c----cceec-cccccCCCCCCccceee
Q 006905 470 YRNILDMNAHLGGFAAALIDF-PVWVMNVVPAEAKINTLGVIYERG------L----VGTYT-NWCEAMSTYPRTYDLIH 537 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~-~v~~mnv~~~~~~~~~l~~~~~rg------l----i~~~~-~~~e~~~~yp~t~Dlih 537 (626)
-.+|||+|||.|+++..+++. +. .+|+.+|.++.+++++.++- + +.+++ |..+.+...+++||+|.
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYKSV--ENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCTTC--CEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHcCCC--CEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 468999999999999999987 33 37899999999999988752 2 22222 22221222358999999
Q ss_pred eccccccCCCCCCH--HHHHHHhhhhccCCcEEEEEc-----ChHHHHHHHHHHHhCCCeeEEeecC--CCCCCcceEEE
Q 006905 538 ADSVFSLYKDRCET--EDILLEMDRILRPEGGVIFRD-----DVDELVKVKRIIDALKWQSQIVDHE--DGPLEREKLLF 608 (626)
Q Consensus 538 ~~~~f~~~~~~c~~--~~~l~E~dRiLRPgG~~i~~d-----~~~~~~~~~~~~~~l~w~~~~~~~e--~~~~~~e~~l~ 608 (626)
++.. ......-.+ ..++.++.|+|||||.+++.. ..+.+..+.+.++..--.+...... ..+.+.-.+++
T Consensus 195 ~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~f~~ 273 (321)
T 2pt6_A 195 VDSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGILC 273 (321)
T ss_dssp EECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEEEEEE
T ss_pred ECCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCCeEEEEEEeccccCceEEEEE
Confidence 8642 222111111 689999999999999999953 2234455555555554444433211 11212345788
Q ss_pred EEeccc
Q 006905 609 AVKLYW 614 (626)
Q Consensus 609 ~~K~~w 614 (626)
|.|.+-
T Consensus 274 as~~~~ 279 (321)
T 2pt6_A 274 CSKTDT 279 (321)
T ss_dssp EESSTT
T ss_pred eeCCCC
Confidence 988753
No 456
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.26 E-value=3.3e-06 Score=92.23 Aligned_cols=116 Identities=15% Similarity=0.092 Sum_probs=80.2
Q ss_pred HHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhh-----------------CCcEEEeCCccchHHHHHHHHHHcCC
Q 006905 195 DAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLS-----------------RNIITMSFAPRDTHEAQVQFALERGV 257 (626)
Q Consensus 195 ~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~-----------------~~V~avdis~~dls~a~i~~A~erg~ 257 (626)
...++.+.+++... .+.+|||.|||+|.++..+++ ..++++|+++.....+..+.. .+++
T Consensus 157 ~~v~~~mv~~l~~~--~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~-l~g~ 233 (445)
T 2okc_A 157 RPLIQAMVDCINPQ--MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLY-LHGI 233 (445)
T ss_dssp HHHHHHHHHHHCCC--TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHH-HTTC
T ss_pred HHHHHHHHHHhCCC--CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHH-HhCC
Confidence 34556667766433 345899999999998877654 468999998755544443333 3455
Q ss_pred ---CeEEEEcccccCCCCCCCeeEEEecccccccccc----------------HHHHHHHHHhcccCCeEEEEEeC
Q 006905 258 ---PALIGVLAAERLPYPSRAFDMAHCSRCLIPWNQF----------------GGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 258 ---~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h~~~~----------------~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
...+..+|+...+.. ..||+|+++..+.+.... ...++..+.++|||||++++..|
T Consensus 234 ~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 234 GTDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp CSSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CcCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 455667776665543 489999998776442211 13789999999999999999865
No 457
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.24 E-value=4.5e-07 Score=100.24 Aligned_cols=96 Identities=15% Similarity=0.164 Sum_probs=70.4
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc---cceeccccccCCCCCCccceeeecccc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL---VGTYTNWCEAMSTYPRTYDLIHADSVF 542 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~~~~e~~~~yp~t~Dlih~~~~f 542 (626)
-.+|||+|||.|.++..|++.+. ..|+.+|.++ ++..+.++ |+ +.+++.-.+.+ .+|..||+|.+..++
T Consensus 159 ~~~VLDiGcGtG~la~~la~~~~--~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~-~~~~~fD~Ivs~~~~ 234 (480)
T 3b3j_A 159 DKIVLDVGCGSGILSFFAAQAGA--RKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEV-SLPEQVDIIISEPMG 234 (480)
T ss_dssp TCEEEEESCSTTHHHHHHHHTTC--SEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTC-CCSSCEEEEECCCCH
T ss_pred CCEEEEecCcccHHHHHHHHcCC--CEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhC-ccCCCeEEEEEeCch
Confidence 46899999999999999988764 2788899985 87766554 54 44444211111 346899999998776
Q ss_pred ccCCCCCCHHHHHHHhhhhccCCcEEEE
Q 006905 543 SLYKDRCETEDILLEMDRILRPEGGVIF 570 (626)
Q Consensus 543 ~~~~~~c~~~~~l~E~dRiLRPgG~~i~ 570 (626)
.+.... ++...|.++.|+|||||.+++
T Consensus 235 ~~~~~e-~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 235 YMLFNE-RMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp HHHTCH-HHHHHHHHGGGGEEEEEEEES
T ss_pred HhcCcH-HHHHHHHHHHHhcCCCCEEEE
Confidence 655432 456678899999999999985
No 458
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.24 E-value=2.7e-06 Score=88.11 Aligned_cols=89 Identities=12% Similarity=0.011 Sum_probs=61.5
Q ss_pred CCCEEEEeCCCC------ch-HHHHHhh--CCcEEEeCCccchHHHHHHHHHHcCCCeEE-EEcccccCCCCCCCeeEEE
Q 006905 211 SIRTAIDTGCGV------AS-WGAYLLS--RNIITMSFAPRDTHEAQVQFALERGVPALI-GVLAAERLPYPSRAFDMAH 280 (626)
Q Consensus 211 ~~~~VLDIGCGt------G~-~a~~La~--~~V~avdis~~dls~a~i~~A~erg~~~~~-~v~d~~~Lpf~d~sFDlV~ 280 (626)
++.+|||+|||+ |+ .++.+.. ..|+++|+++. + . .+.+ .++|...++++ ++||+|+
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs~~~a~~~~~~~~V~gvDis~~-v----------~--~v~~~i~gD~~~~~~~-~~fD~Vv 128 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDF-V----------S--DADSTLIGDCATVHTA-NKWDLII 128 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCC-B----------C--SSSEEEESCGGGCCCS-SCEEEEE
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHcCCCCEEEEEECCCC-C----------C--CCEEEEECccccCCcc-CcccEEE
Confidence 356899999954 65 2222222 36899999885 1 1 2446 77888887765 6899999
Q ss_pred ecccccccc-----------ccHHHHHHHHHhcccCCeEEEEEeC
Q 006905 281 CSRCLIPWN-----------QFGGIYLIEVDRVLRPGGYWILSGP 314 (626)
Q Consensus 281 ~~~~l~h~~-----------~~~~~~L~Ei~RvLKPGG~lvis~p 314 (626)
|+... ++. .....+++++.|+|||||.|++...
T Consensus 129 sn~~~-~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~ 172 (290)
T 2xyq_A 129 SDMYD-PRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKIT 172 (290)
T ss_dssp ECCCC-CC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EcCCc-cccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 97542 211 1114789999999999999999754
No 459
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.23 E-value=1.4e-06 Score=88.96 Aligned_cols=114 Identities=17% Similarity=0.157 Sum_probs=77.7
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc--cceeccccccCCCCCCccceeeeccccc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL--VGTYTNWCEAMSTYPRTYDLIHADSVFS 543 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl--i~~~~~~~e~~~~yp~t~Dlih~~~~f~ 543 (626)
-.+|||+|||+|+|+..|++..- ...|+.+|.++.+++.+.++ |+ +-+++.=.+.+ ..+.+||+|.++...
T Consensus 120 ~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~~~~~D~Vi~d~p~- 196 (272)
T 3a27_A 120 NEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-ELKDVADRVIMGYVH- 196 (272)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CCTTCEEEEEECCCS-
T ss_pred CCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-CccCCceEEEECCcc-
Confidence 45799999999999999987621 12688899998898887663 33 22333222223 225789999886443
Q ss_pred cCCCCCCHHHHHHHhhhhccCCcEEEEEcCh------HHH-HHHHHHHHhCCCeeE
Q 006905 544 LYKDRCETEDILLEMDRILRPEGGVIFRDDV------DEL-VKVKRIIDALKWQSQ 592 (626)
Q Consensus 544 ~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~------~~~-~~~~~~~~~l~w~~~ 592 (626)
+...++.++-|+|||||.+++++.. +.. ..++.+.+.+.++..
T Consensus 197 ------~~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (272)
T 3a27_A 197 ------KTHKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLI 246 (272)
T ss_dssp ------SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHTTEEEE
T ss_pred ------cHHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHHhCCeeE
Confidence 5577899999999999999998543 233 334445555555554
No 460
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.22 E-value=5.9e-06 Score=84.83 Aligned_cols=141 Identities=17% Similarity=0.166 Sum_probs=86.6
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhc------c----cceec-cccccCCCCCCccceeee
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERG------L----VGTYT-NWCEAMSTYPRTYDLIHA 538 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rg------l----i~~~~-~~~e~~~~yp~t~Dlih~ 538 (626)
-++|||+|||.|+++..+++.+ -+.+|+.+|.++.+++++.++- + +.+.+ |..+.....+++||+|.+
T Consensus 79 ~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (283)
T 2i7c_A 79 PKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 157 (283)
T ss_dssp CCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCeEEEEeCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEE
Confidence 4789999999999999998873 1247889999989999888752 1 12222 211111122689999998
Q ss_pred ccccccCCCCCCH--HHHHHHhhhhccCCcEEEEEcC-----hHHHHHHHHHHHhCCCeeEEeecCCC--CCCcceEEEE
Q 006905 539 DSVFSLYKDRCET--EDILLEMDRILRPEGGVIFRDD-----VDELVKVKRIIDALKWQSQIVDHEDG--PLEREKLLFA 609 (626)
Q Consensus 539 ~~~f~~~~~~c~~--~~~l~E~dRiLRPgG~~i~~d~-----~~~~~~~~~~~~~l~w~~~~~~~e~~--~~~~e~~l~~ 609 (626)
+......... .+ ..++.++.|+|||||.+++... .+....+.+.+++.--.+..+...-- +.+.-.+++|
T Consensus 158 d~~~~~~~~~-~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~y~~g~~g~~~~ 236 (283)
T 2i7c_A 158 DSSDPIGPAE-TLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGILCC 236 (283)
T ss_dssp ECCCTTTGGG-GGSSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEEEEEEE
T ss_pred cCCCCCCcch-hhhHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHHCCceEEEEEEcCCcCCCcEEEEEE
Confidence 6433221111 22 6899999999999999999732 23344444444444233333222111 1122357778
Q ss_pred Eec
Q 006905 610 VKL 612 (626)
Q Consensus 610 ~K~ 612 (626)
.|.
T Consensus 237 s~~ 239 (283)
T 2i7c_A 237 SKT 239 (283)
T ss_dssp ESS
T ss_pred eCC
Confidence 776
No 461
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.21 E-value=3.3e-06 Score=88.42 Aligned_cols=142 Identities=12% Similarity=0.014 Sum_probs=87.7
Q ss_pred ceeEEeccCchhhHhhhhhC-C-CeEEEEeccCccCcccHHHHHHhcc------cceec-cccccCCCCC-Cccceeeec
Q 006905 470 YRNILDMNAHLGGFAAALID-F-PVWVMNVVPAEAKINTLGVIYERGL------VGTYT-NWCEAMSTYP-RTYDLIHAD 539 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~-~-~v~~mnv~~~~~~~~~l~~~~~rgl------i~~~~-~~~e~~~~yp-~t~Dlih~~ 539 (626)
-.+|||+|||.|+++.+|++ . ++ .|+.+|.++.+++++.++-- +.+++ |-.+-+..++ ++||+|.++
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~---~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D 166 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQS---RNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRD 166 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTC---EEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEEC
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCc---EEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEEC
Confidence 44899999999999999998 3 44 67788888889999887631 22333 2222223455 899999986
Q ss_pred cccccCCCCCC--HHHHHHHhhhhccCCcEEEEEcC--h--HHHHHHHHHHHhCCCeeEEee-cC--CCCCCcceEEEEE
Q 006905 540 SVFSLYKDRCE--TEDILLEMDRILRPEGGVIFRDD--V--DELVKVKRIIDALKWQSQIVD-HE--DGPLEREKLLFAV 610 (626)
Q Consensus 540 ~~f~~~~~~c~--~~~~l~E~dRiLRPgG~~i~~d~--~--~~~~~~~~~~~~l~w~~~~~~-~e--~~~~~~e~~l~~~ 610 (626)
. |......-. -..++.++.|+|||||.+++.-. . +.+..+...++..=-.+.++. .. .|......|++|.
T Consensus 167 ~-~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF~~v~~~~~~~~~~g~~~gN~Vl~As 245 (317)
T 3gjy_A 167 V-FAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEVFEHVAVIADPPMLKGRRYGNIILMGS 245 (317)
T ss_dssp C-STTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHCSEEEEEECHHHHTTSSCEEEEEEEE
T ss_pred C-CCccccchhhhHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHHCCceEEEEecCCCCCCcCceEEEEEE
Confidence 4 333221111 26799999999999999998522 1 222233333322222344332 11 2222346789999
Q ss_pred ecccC
Q 006905 611 KLYWT 615 (626)
Q Consensus 611 K~~w~ 615 (626)
|...-
T Consensus 246 ~~plp 250 (317)
T 3gjy_A 246 DTEFF 250 (317)
T ss_dssp SSCCC
T ss_pred CCCCC
Confidence 87653
No 462
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.21 E-value=8.4e-08 Score=96.21 Aligned_cols=111 Identities=14% Similarity=0.101 Sum_probs=69.1
Q ss_pred HHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCCC-
Q 006905 197 YIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYPS- 273 (626)
Q Consensus 197 yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~d- 273 (626)
..+.+.+.+.... +.+|||||||+|.++..|+++ .++++|+++.++..+..+.. ....+.+..+|...+++++
T Consensus 17 ~~~~i~~~~~~~~--~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~--~~~~v~~~~~D~~~~~~~~~ 92 (245)
T 1yub_A 17 VLNQIIKQLNLKE--TDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLK--LNTRVTLIHQDILQFQFPNK 92 (245)
T ss_dssp THHHHHHHCCCCS--SEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTT--TCSEEEECCSCCTTTTCCCS
T ss_pred HHHHHHHhcCCCC--CCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhc--cCCceEEEECChhhcCcccC
Confidence 3445566654433 458999999999999999886 57888887755432221111 1124667778888888774
Q ss_pred CCeeEEEecccccccc----------ccHHHHH----HHHHhcccCCeEEEEE
Q 006905 274 RAFDMAHCSRCLIPWN----------QFGGIYL----IEVDRVLRPGGYWILS 312 (626)
Q Consensus 274 ~sFDlV~~~~~l~h~~----------~~~~~~L----~Ei~RvLKPGG~lvis 312 (626)
++| .|+++.....-. .....++ +.+.|+|+|||.+.+.
T Consensus 93 ~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 93 QRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp SEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred CCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 689 777765331100 0112233 5578888888877664
No 463
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.20 E-value=1.3e-06 Score=89.64 Aligned_cols=99 Identities=13% Similarity=0.060 Sum_probs=70.3
Q ss_pred CCceeEEeccCch--hhHhhhhhC---CCeEEEEeccCccCcccHHHHHHhcc------cceeccccccCCCC------C
Q 006905 468 GRYRNILDMNAHL--GGFAAALID---FPVWVMNVVPAEAKINTLGVIYERGL------VGTYTNWCEAMSTY------P 530 (626)
Q Consensus 468 ~~~r~vlD~g~g~--G~faa~l~~---~~v~~mnv~~~~~~~~~l~~~~~rgl------i~~~~~~~e~~~~y------p 530 (626)
..+|.|||+|||+ ++....++. .+. .|+.+|+++.||..+.++-- +...+ ..+... |
T Consensus 77 ~g~~q~LDLGcG~pT~~~~~~la~~~~P~a---rVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~---aD~~~~~~~l~~~ 150 (277)
T 3giw_A 77 AGIRQFLDIGTGIPTSPNLHEIAQSVAPES---RVVYVDNDPIVLTLSQGLLASTPEGRTAYVE---ADMLDPASILDAP 150 (277)
T ss_dssp SCCCEEEEESCCSCCSSCHHHHHHHHCTTC---EEEEEECCHHHHHTTHHHHCCCSSSEEEEEE---CCTTCHHHHHTCH
T ss_pred cCCCEEEEeCCCCCcccHHHHHHHHHCCCC---EEEEEeCChHHHHHHHHHhccCCCCcEEEEE---ecccChhhhhccc
Confidence 4589999999998 433333332 233 79999999999998876521 12222 233221 2
Q ss_pred ---Cccc-----eeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEc
Q 006905 531 ---RTYD-----LIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRD 572 (626)
Q Consensus 531 ---~t~D-----lih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d 572 (626)
++|| .|.++.+|.+..+..+...+|.++.+.|+|||+|++++
T Consensus 151 ~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~ 200 (277)
T 3giw_A 151 ELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSI 200 (277)
T ss_dssp HHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEE
T ss_pred ccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEe
Confidence 5566 47788999988875556789999999999999999983
No 464
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.20 E-value=7.1e-07 Score=88.36 Aligned_cols=92 Identities=18% Similarity=0.166 Sum_probs=66.8
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc--cceeccccccCCCCC--Cccceeeeccc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL--VGTYTNWCEAMSTYP--RTYDLIHADSV 541 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl--i~~~~~~~e~~~~yp--~t~Dlih~~~~ 541 (626)
-.+|||+|||.|.+++.|++..- .+|+.+|.++.+++.+.++ |+ +.+.. +.....+| ..||+|.+...
T Consensus 92 ~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~--~d~~~~~~~~~~fD~Ii~~~~ 167 (235)
T 1jg1_A 92 GMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKNVHVIL--GDGSKGFPPKAPYDVIIVTAG 167 (235)
T ss_dssp TCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEE--SCGGGCCGGGCCEEEEEECSB
T ss_pred CCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEE--CCcccCCCCCCCccEEEECCc
Confidence 45899999999999999987631 3688889888899888775 32 22222 11133455 34999999777
Q ss_pred cccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh
Q 006905 542 FSLYKDRCETEDILLEMDRILRPEGGVIFRDDV 574 (626)
Q Consensus 542 f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~ 574 (626)
+.+.. .++.|+|||||.+++.-..
T Consensus 168 ~~~~~---------~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 168 APKIP---------EPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp BSSCC---------HHHHHTEEEEEEEEEEECS
T ss_pred HHHHH---------HHHHHhcCCCcEEEEEEec
Confidence 76543 3789999999999997543
No 465
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.19 E-value=6.4e-06 Score=85.63 Aligned_cols=142 Identities=18% Similarity=0.165 Sum_probs=84.6
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh------cc----cceec-cccccCCCCCCccceeee
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER------GL----VGTYT-NWCEAMSTYPRTYDLIHA 538 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r------gl----i~~~~-~~~e~~~~yp~t~Dlih~ 538 (626)
-++|||+|||.|+++..|++.+ -+.+|+.+|.++.+++++.++ |+ +.+++ |-.+.+...+++||+|.+
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~ 174 (304)
T 2o07_A 96 PRKVLIIGGGDGGVLREVVKHP-SVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIIT 174 (304)
T ss_dssp CCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEE
Confidence 4789999999999999999873 123788899998999988775 22 22332 111111223589999998
Q ss_pred ccccccCCCC-CCHHHHHHHhhhhccCCcEEEEEc-C----hHHHHHHHHHHHhCCCeeEEee--cCCCCCCcceEEEEE
Q 006905 539 DSVFSLYKDR-CETEDILLEMDRILRPEGGVIFRD-D----VDELVKVKRIIDALKWQSQIVD--HEDGPLEREKLLFAV 610 (626)
Q Consensus 539 ~~~f~~~~~~-c~~~~~l~E~dRiLRPgG~~i~~d-~----~~~~~~~~~~~~~l~w~~~~~~--~e~~~~~~e~~l~~~ 610 (626)
+......... -....++.++.|+|||||.+++.. . .+....+.+.++.+-=.+...- .-.-+.+...+++|.
T Consensus 175 d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~~~g~~g~~~as 254 (304)
T 2o07_A 175 DSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVAYAYCTIPTYPSGQIGFMLCS 254 (304)
T ss_dssp ECC-----------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGEEEEEEEE
T ss_pred CCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHhCCCceeEEEEeccccCcceEEEEEe
Confidence 6433211110 012468999999999999999864 1 2344455444444432333221 111111234578888
Q ss_pred ec
Q 006905 611 KL 612 (626)
Q Consensus 611 K~ 612 (626)
|.
T Consensus 255 ~~ 256 (304)
T 2o07_A 255 KN 256 (304)
T ss_dssp SS
T ss_pred CC
Confidence 86
No 466
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.18 E-value=4.4e-06 Score=86.63 Aligned_cols=87 Identities=10% Similarity=-0.004 Sum_probs=66.3
Q ss_pred HHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCC
Q 006905 195 DAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYP 272 (626)
Q Consensus 195 ~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~ 272 (626)
...++.|.+.+.... +.+|||||||+|.++..|+++ .|+++|+++..+..+..+.. ....+.+..+|+..++++
T Consensus 36 ~~i~~~Iv~~l~~~~--~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~--~~~~v~vi~gD~l~~~~~ 111 (295)
T 3gru_A 36 KNFVNKAVESANLTK--DDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKE--LYNNIEIIWGDALKVDLN 111 (295)
T ss_dssp HHHHHHHHHHTTCCT--TCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHH--HCSSEEEEESCTTTSCGG
T ss_pred HHHHHHHHHhcCCCC--cCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhc--cCCCeEEEECchhhCCcc
Confidence 345666777765544 458999999999999999886 68999999876665444433 233577888899888888
Q ss_pred CCCeeEEEecccc
Q 006905 273 SRAFDMAHCSRCL 285 (626)
Q Consensus 273 d~sFDlV~~~~~l 285 (626)
+.+||.|+++..+
T Consensus 112 ~~~fD~Iv~NlPy 124 (295)
T 3gru_A 112 KLDFNKVVANLPY 124 (295)
T ss_dssp GSCCSEEEEECCG
T ss_pred cCCccEEEEeCcc
Confidence 8889999998754
No 467
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.18 E-value=4.5e-06 Score=86.41 Aligned_cols=128 Identities=9% Similarity=0.105 Sum_probs=76.9
Q ss_pred ceeEEeccC------chhh-HhhhhhCCCeEEEEeccCccCcccHHHHHHhcccce-ec-cccccCCCCCCccceeeecc
Q 006905 470 YRNILDMNA------HLGG-FAAALIDFPVWVMNVVPAEAKINTLGVIYERGLVGT-YT-NWCEAMSTYPRTYDLIHADS 540 (626)
Q Consensus 470 ~r~vlD~g~------g~G~-faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rgli~~-~~-~~~e~~~~yp~t~Dlih~~~ 540 (626)
-.+|||+|| |.|+ .++.+...+. .|+.+|.++. + + + +.+ ++ |+.+ + .++.+||+|.++.
T Consensus 64 g~~VLDLGcGsg~~~GpGs~~~a~~~~~~~---~V~gvDis~~-v----~-~-v~~~i~gD~~~-~-~~~~~fD~Vvsn~ 131 (290)
T 2xyq_A 64 NMRVIHFGAGSDKGVAPGTAVLRQWLPTGT---LLVDSDLNDF-V----S-D-ADSTLIGDCAT-V-HTANKWDLIISDM 131 (290)
T ss_dssp TCEEEEESCCCTTSBCHHHHHHHHHSCTTC---EEEEEESSCC-B----C-S-SSEEEESCGGG-C-CCSSCEEEEEECC
T ss_pred CCEEEEeCCCCCCCCCcHHHHHHHHcCCCC---EEEEEECCCC-C----C-C-CEEEEECcccc-C-CccCcccEEEEcC
Confidence 457999999 5576 2333333223 5788888855 2 2 2 233 33 3322 1 2348999999975
Q ss_pred cccc--------CCCCCCHHHHHHHhhhhccCCcEEEEEcCh-HHHHHHHHHHHhCCC-eeEEeecCCCCCCcceEEEEE
Q 006905 541 VFSL--------YKDRCETEDILLEMDRILRPEGGVIFRDDV-DELVKVKRIIDALKW-QSQIVDHEDGPLEREKLLFAV 610 (626)
Q Consensus 541 ~f~~--------~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~-~~~~~~~~~~~~l~w-~~~~~~~e~~~~~~e~~l~~~ 610 (626)
.... ......++.+|.|+.|+|||||.|++.... .....+.++++...+ .+.++-.. ....|-+|+++
T Consensus 132 ~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~GF~~v~~~asr--~~s~e~~lv~~ 209 (290)
T 2xyq_A 132 YDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSWWTAFVTNVN--ASSSEAFLIGA 209 (290)
T ss_dssp CCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEEEEEEEEGGG--TTSSCEEEEEE
T ss_pred CccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHcCCcEEEEEEcC--CCchheEEecC
Confidence 4321 111123457999999999999999995422 223467777777644 44444112 22468888887
Q ss_pred e
Q 006905 611 K 611 (626)
Q Consensus 611 K 611 (626)
.
T Consensus 210 ~ 210 (290)
T 2xyq_A 210 N 210 (290)
T ss_dssp E
T ss_pred C
Confidence 6
No 468
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.18 E-value=4e-07 Score=91.06 Aligned_cols=99 Identities=13% Similarity=0.060 Sum_probs=61.4
Q ss_pred ceeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHHHh----cc---cceecccccc--CCCCC----Cccc
Q 006905 470 YRNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIYER----GL---VGTYTNWCEA--MSTYP----RTYD 534 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~~~~e~--~~~yp----~t~D 534 (626)
-.+|||+|||+|.++..|+.+ +. +|+.+|.++.+++.+.++ |+ +.+++.=.+. +..++ .+||
T Consensus 66 ~~~vLDlG~G~G~~~~~la~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (254)
T 2h00_A 66 LRRGIDIGTGASCIYPLLGATLNGW---YFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYD 142 (254)
T ss_dssp CCEEEEESCTTTTHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBS
T ss_pred CCEEEEeCCChhHHHHHHHHhCCCC---eEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCccc
Confidence 457999999999999988865 33 789999999999988765 33 3344421111 22344 5899
Q ss_pred eeeeccccccCCC-------C-----CCHHHHHHHhhhhccCCcEEEEE
Q 006905 535 LIHADSVFSLYKD-------R-----CETEDILLEMDRILRPEGGVIFR 571 (626)
Q Consensus 535 lih~~~~f~~~~~-------~-----c~~~~~l~E~dRiLRPgG~~i~~ 571 (626)
+|.++-.|..... + .....++.++.|+|||||.+.+.
T Consensus 143 ~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 143 FCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp EEEECCCCC-------------------------CTTTTHHHHTHHHHH
T ss_pred EEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEE
Confidence 9999855543220 0 11124566788888887776554
No 469
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.15 E-value=1.4e-06 Score=88.87 Aligned_cols=115 Identities=17% Similarity=0.140 Sum_probs=74.4
Q ss_pred ceeEEeccCchhhHhhhhhC--CCeEEEEeccCccCcccHHHHHHh----cc--cceeccccccCCCC----CCccceee
Q 006905 470 YRNILDMNAHLGGFAAALID--FPVWVMNVVPAEAKINTLGVIYER----GL--VGTYTNWCEAMSTY----PRTYDLIH 537 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~--~~v~~mnv~~~~~~~~~l~~~~~r----gl--i~~~~~~~e~~~~y----p~t~Dlih 537 (626)
-.+|||+|||.|+++..|++ .+. ..|+.+|.++.++..+.++ |+ +.+++.-.+.+... +..||+|.
T Consensus 84 g~~VLDlgaG~G~~t~~la~~~~~~--~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl 161 (274)
T 3ajd_A 84 DDFILDMCAAPGGKTTHLAQLMKNK--GTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKIL 161 (274)
T ss_dssp TCEEEETTCTTCHHHHHHHHHTTTC--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCC--CEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEE
Confidence 35799999999999999986 331 1688999998899887766 44 23333111122211 47899999
Q ss_pred eccccccCCC---------------CCCHHHHHHHhhhhccCCcEEEEEc----ChHHHHHHHHHHHh
Q 006905 538 ADSVFSLYKD---------------RCETEDILLEMDRILRPEGGVIFRD----DVDELVKVKRIIDA 586 (626)
Q Consensus 538 ~~~~f~~~~~---------------~c~~~~~l~E~dRiLRPgG~~i~~d----~~~~~~~~~~~~~~ 586 (626)
++--++.... .-....+|.++.|+|||||.++++. ..+....++.+++.
T Consensus 162 ~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l~~ 229 (274)
T 3ajd_A 162 LDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQK 229 (274)
T ss_dssp EEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHHHH
T ss_pred EcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHHHh
Confidence 8744432110 0234679999999999999999963 12333445555543
No 470
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.14 E-value=5.4e-06 Score=87.73 Aligned_cols=140 Identities=11% Similarity=0.153 Sum_probs=95.3
Q ss_pred hhhcCCCCCceeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHHHhc---c---cceeccccccCCCCC-C
Q 006905 461 NNQLGQSGRYRNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIYERG---L---VGTYTNWCEAMSTYP-R 531 (626)
Q Consensus 461 ~~~~~~~~~~r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~rg---l---i~~~~~~~e~~~~yp-~ 531 (626)
+..+.. ...++|+|+|||.|.++.+|+++ ++ .++-.|.+ .+++.+.++- . |.... .+|-+-| .
T Consensus 172 ~~~~~~-~~~~~v~DvGgG~G~~~~~l~~~~p~~---~~~~~dlp-~v~~~a~~~~~~~~~~rv~~~~---gD~~~~~~~ 243 (353)
T 4a6d_A 172 LTAFDL-SVFPLMCDLGGGAGALAKECMSLYPGC---KITVFDIP-EVVWTAKQHFSFQEEEQIDFQE---GDFFKDPLP 243 (353)
T ss_dssp HHSSCG-GGCSEEEEETCTTSHHHHHHHHHCSSC---EEEEEECH-HHHHHHHHHSCC--CCSEEEEE---SCTTTSCCC
T ss_pred HHhcCc-ccCCeEEeeCCCCCHHHHHHHHhCCCc---eeEeccCH-HHHHHHHHhhhhcccCceeeec---CccccCCCC
Confidence 333444 66889999999999999999876 23 44555664 7777776542 1 22222 2333223 6
Q ss_pred ccceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh--------------H------------HHHHHHHHHH
Q 006905 532 TYDLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV--------------D------------ELVKVKRIID 585 (626)
Q Consensus 532 t~Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~--------------~------------~~~~~~~~~~ 585 (626)
.+|++.+..++.++.+. +...+|.++.|.|+|||.++|-|.+ + ...+.+++++
T Consensus 244 ~~D~~~~~~vlh~~~d~-~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~ 322 (353)
T 4a6d_A 244 EADLYILARVLHDWADG-KCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLS 322 (353)
T ss_dssp CCSEEEEESSGGGSCHH-HHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHH
T ss_pred CceEEEeeeecccCCHH-HHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHH
Confidence 68999999999988753 3457999999999999999997631 1 1345677788
Q ss_pred hCCCeeEEeecCCCCCCcceEEEEEec
Q 006905 586 ALKWQSQIVDHEDGPLEREKLLFAVKL 612 (626)
Q Consensus 586 ~l~w~~~~~~~e~~~~~~e~~l~~~K~ 612 (626)
+--|+..-+..- + ....+++|+|.
T Consensus 323 ~AGf~~v~v~~~-~--~~~~~i~ArKg 346 (353)
T 4a6d_A 323 SAGFRDFQFKKT-G--AIYDAILARKG 346 (353)
T ss_dssp HHTCEEEEEECC-S--SSCEEEEEECC
T ss_pred HCCCceEEEEEc-C--CceEEEEEEec
Confidence 778876543322 2 24568999995
No 471
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.14 E-value=3e-06 Score=90.78 Aligned_cols=97 Identities=18% Similarity=0.126 Sum_probs=70.6
Q ss_pred eeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHH----HHhcc---cceeccccccCCCCCCccceeeeccccc
Q 006905 471 RNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVI----YERGL---VGTYTNWCEAMSTYPRTYDLIHADSVFS 543 (626)
Q Consensus 471 r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~----~~rgl---i~~~~~~~e~~~~yp~t~Dlih~~~~f~ 543 (626)
.+|||+|||+|.++...++.|.- .|.++|.+ +++..+ .+.|+ |.+++.-.+.+ ..|..||+|.|..+-.
T Consensus 85 k~VLDvG~GtGiLs~~Aa~aGA~--~V~ave~s-~~~~~a~~~~~~n~~~~~i~~i~~~~~~~-~lpe~~DvivsE~~~~ 160 (376)
T 4hc4_A 85 KTVLDVGAGTGILSIFCAQAGAR--RVYAVEAS-AIWQQAREVVRFNGLEDRVHVLPGPVETV-ELPEQVDAIVSEWMGY 160 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCS--EEEEEECS-TTHHHHHHHHHHTTCTTTEEEEESCTTTC-CCSSCEEEEECCCCBT
T ss_pred CEEEEeCCCccHHHHHHHHhCCC--EEEEEeCh-HHHHHHHHHHHHcCCCceEEEEeeeeeee-cCCccccEEEeecccc
Confidence 46999999999998777766541 45667776 465544 44566 55666433333 3578999999977666
Q ss_pred cCCCCCCHHHHHHHhhhhccCCcEEEEE
Q 006905 544 LYKDRCETEDILLEMDRILRPEGGVIFR 571 (626)
Q Consensus 544 ~~~~~c~~~~~l~E~dRiLRPgG~~i~~ 571 (626)
.+.....++.++...+|.|+|||.+|-+
T Consensus 161 ~l~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 161 GLLHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp TBTTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred cccccchhhhHHHHHHhhCCCCceECCc
Confidence 5555567899999999999999998863
No 472
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.13 E-value=4.9e-06 Score=83.51 Aligned_cols=83 Identities=13% Similarity=0.146 Sum_probs=56.4
Q ss_pred HHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcC---CCeEEEEcccccC
Q 006905 195 DAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERG---VPALIGVLAAERL 269 (626)
Q Consensus 195 ~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg---~~~~~~v~d~~~L 269 (626)
...++.+.+.+... .+.+|||||||+|.++..|+++ .++++|+++. +++.++++. ..+.+..+|+..+
T Consensus 16 ~~~~~~i~~~~~~~--~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~-----~~~~a~~~~~~~~~v~~~~~D~~~~ 88 (244)
T 1qam_A 16 KHNIDKIMTNIRLN--EHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHK-----LCKTTENKLVDHDNFQVLNKDILQF 88 (244)
T ss_dssp HHHHHHHHTTCCCC--TTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHH-----HHHHHHHHTTTCCSEEEECCCGGGC
T ss_pred HHHHHHHHHhCCCC--CCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHH-----HHHHHHHhhccCCCeEEEEChHHhC
Confidence 34555666665443 3458999999999999999986 5777777664 444444332 3577888888888
Q ss_pred CCCC-CCeeEEEecccc
Q 006905 270 PYPS-RAFDMAHCSRCL 285 (626)
Q Consensus 270 pf~d-~sFDlV~~~~~l 285 (626)
++++ ..| .|+++...
T Consensus 89 ~~~~~~~~-~vv~nlPy 104 (244)
T 1qam_A 89 KFPKNQSY-KIFGNIPY 104 (244)
T ss_dssp CCCSSCCC-EEEEECCG
T ss_pred CcccCCCe-EEEEeCCc
Confidence 8874 456 56666544
No 473
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.13 E-value=4.7e-06 Score=88.84 Aligned_cols=117 Identities=10% Similarity=0.074 Sum_probs=81.2
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc--cceec-cccccCCC-CCCccceeeeccc
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL--VGTYT-NWCEAMST-YPRTYDLIHADSV 541 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl--i~~~~-~~~e~~~~-yp~t~Dlih~~~~ 541 (626)
-.+|||+| |.|.++.+|+..+. ...|+.+|.++.+++++.++ |+ +.+++ |..+.++. ++.+||+|.++..
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~-~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p 250 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGL-PKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPP 250 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTC-CSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCC
T ss_pred CCEEEEEC-CCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCC
Confidence 46899999 99999999987532 12689999999999998876 54 44443 33222332 2358999999877
Q ss_pred cccCCCCCCHHHHHHHhhhhccCCcE-EEEEcC-----hHHHHHHHHHHH-hCCCeeE
Q 006905 542 FSLYKDRCETEDILLEMDRILRPEGG-VIFRDD-----VDELVKVKRIID-ALKWQSQ 592 (626)
Q Consensus 542 f~~~~~~c~~~~~l~E~dRiLRPgG~-~i~~d~-----~~~~~~~~~~~~-~l~w~~~ 592 (626)
|.... ...+|.++.|+|||||. +++.-. ...+..+++++. .+.....
T Consensus 251 ~~~~~----~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~ 304 (373)
T 2qm3_A 251 ETLEA----IRAFVGRGIATLKGPRCAGYFGITRRESSLDKWREIQKLLLNEFNVVIT 304 (373)
T ss_dssp SSHHH----HHHHHHHHHHTBCSTTCEEEEEECTTTCCHHHHHHHHHHHHHTSCCEEE
T ss_pred CchHH----HHHHHHHHHHHcccCCeEEEEEEecCcCCHHHHHHHHHHHHHhcCcchh
Confidence 66432 47899999999999994 355422 222366777776 6666553
No 474
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.13 E-value=2.4e-06 Score=93.19 Aligned_cols=98 Identities=9% Similarity=0.061 Sum_probs=68.9
Q ss_pred CceeEEeccCchhhHhhhhhCC-CeEEEEeccCccCcccHHHH-------HHh----cc----cceeccccccCCC---C
Q 006905 469 RYRNILDMNAHLGGFAAALIDF-PVWVMNVVPAEAKINTLGVI-------YER----GL----VGTYTNWCEAMST---Y 529 (626)
Q Consensus 469 ~~r~vlD~g~g~G~faa~l~~~-~v~~mnv~~~~~~~~~l~~~-------~~r----gl----i~~~~~~~e~~~~---y 529 (626)
.-.+|||+|||+|.+++.|++. +. ..|+++|.++.++..+ .++ |+ +.+.+ +..+.. +
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~~~g~--~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~--gD~~~~~~~~ 317 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAALECGC--ALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSL--KKSFVDNNRV 317 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCC--SEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEE--SSCSTTCHHH
T ss_pred CCCEEEEeCCCcCHHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEE--cCcccccccc
Confidence 3567999999999999999875 32 2688899888887776 443 42 22222 123321 2
Q ss_pred ---CCccceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcCh
Q 006905 530 ---PRTYDLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDDV 574 (626)
Q Consensus 530 ---p~t~Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~ 574 (626)
..+||+|.++..+ +. -++..+|.|+.|+|||||.+++.+..
T Consensus 318 ~~~~~~FDvIvvn~~l-~~---~d~~~~L~el~r~LKpGG~lVi~d~f 361 (433)
T 1u2z_A 318 AELIPQCDVILVNNFL-FD---EDLNKKVEKILQTAKVGCKIISLKSL 361 (433)
T ss_dssp HHHGGGCSEEEECCTT-CC---HHHHHHHHHHHTTCCTTCEEEESSCS
T ss_pred ccccCCCCEEEEeCcc-cc---ccHHHHHHHHHHhCCCCeEEEEeecc
Confidence 3789999986444 11 25677899999999999999998643
No 475
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.13 E-value=3.2e-06 Score=88.14 Aligned_cols=142 Identities=12% Similarity=0.054 Sum_probs=87.8
Q ss_pred ceeEEeccCchhhHhhhhhCC-CeEEEEeccCccCcccHHHHHHhc-------c----cceec-cccccCCCCCCcccee
Q 006905 470 YRNILDMNAHLGGFAAALIDF-PVWVMNVVPAEAKINTLGVIYERG-------L----VGTYT-NWCEAMSTYPRTYDLI 536 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~-~v~~mnv~~~~~~~~~l~~~~~rg-------l----i~~~~-~~~e~~~~yp~t~Dli 536 (626)
-++|||+|||.|+++..|++. ++ .+|+.+|.++.+++++.++- + +.+++ |..+.+...+++||+|
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHPTV--EKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTSTTC--CEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCeEEEEcCCcCHHHHHHHhcCCC--CEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 478999999999999999987 33 47888999989999887642 1 22222 1111111225899999
Q ss_pred eeccccccC--CC--CCCHHHHHHHhhhhccCCcEEEEEc------ChHHHHHHHHHHHhCCCeeEEeecC-CCCCCcce
Q 006905 537 HADSVFSLY--KD--RCETEDILLEMDRILRPEGGVIFRD------DVDELVKVKRIIDALKWQSQIVDHE-DGPLEREK 605 (626)
Q Consensus 537 h~~~~f~~~--~~--~c~~~~~l~E~dRiLRPgG~~i~~d------~~~~~~~~~~~~~~l~w~~~~~~~e-~~~~~~e~ 605 (626)
.++...... .. .-....++.++.|+|||||.+++.- ..+....+.+.++..--.+...... ....+...
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~~~g~~~ 235 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREAFRYVRSYKNHIPGFFLNFG 235 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTTCSEEEEEEEEEGGGTEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHHCCceEEEEEecCCCCCeEE
Confidence 997543220 10 0013689999999999999999862 1234555555555553333322110 00012356
Q ss_pred EEEEEecc
Q 006905 606 LLFAVKLY 613 (626)
Q Consensus 606 ~l~~~K~~ 613 (626)
+++|.|.+
T Consensus 236 ~~~as~~~ 243 (314)
T 1uir_A 236 FLLASDAF 243 (314)
T ss_dssp EEEEESSS
T ss_pred EEEEECCC
Confidence 78898874
No 476
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.12 E-value=1.4e-05 Score=81.41 Aligned_cols=129 Identities=11% Similarity=0.078 Sum_probs=82.8
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHhc------c----cceeccccccCCCCCCccceeeec
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYERG------L----VGTYTNWCEAMSTYPRTYDLIHAD 539 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~rg------l----i~~~~~~~e~~~~yp~t~Dlih~~ 539 (626)
-++|||+|||.|++++.+++.+ ..|+.+|.++.+++++.++- + +.+.+ +....|+.+||+|.++
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~~---~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~---~D~~~~~~~fD~Ii~d 146 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKYD---THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAK---QLLDLDIKKYDLIFCL 146 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTSS---CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEES---SGGGSCCCCEEEEEES
T ss_pred CCEEEEEeCCcCHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEe---chHHHHHhhCCEEEEC
Confidence 4789999999999999998875 47888898888888776541 1 22222 2222334889999985
Q ss_pred cccccCCCCCCHHHHHHHhhhhccCCcEEEEEc-C----hHHHHHHHHHHHhCCCeeEEeecCCCCC-CcceEEEEEecc
Q 006905 540 SVFSLYKDRCETEDILLEMDRILRPEGGVIFRD-D----VDELVKVKRIIDALKWQSQIVDHEDGPL-EREKLLFAVKLY 613 (626)
Q Consensus 540 ~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d-~----~~~~~~~~~~~~~l~w~~~~~~~e~~~~-~~e~~l~~~K~~ 613 (626)
. -+....+.++.|+|||||.+++.. . .+....+.+.++.. +.........-|. +...+++|.|.+
T Consensus 147 ~--------~dp~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~~~~~~~~vP~~g~~~~~~as~~~ 217 (262)
T 2cmg_A 147 Q--------EPDIHRIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGV-FSVAMPFVAPLRILSNKGYIYASFKT 217 (262)
T ss_dssp S--------CCCHHHHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTT-CSEEEEECCTTCTTCCEEEEEEESSC
T ss_pred C--------CChHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHh-CCceEEEEEccCCCcccEEEEeeCCC
Confidence 1 122448999999999999999952 1 12334444444443 3333223332232 234577888874
No 477
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.10 E-value=3.5e-06 Score=90.77 Aligned_cols=122 Identities=18% Similarity=0.204 Sum_probs=80.7
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cccc-eec-cccccCCCCCCccceeeecccc-
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GLVG-TYT-NWCEAMSTYPRTYDLIHADSVF- 542 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gli~-~~~-~~~e~~~~yp~t~Dlih~~~~f- 542 (626)
-.+|||+|||+|+|+.+++..+. .|+.+|.++.+++.+.++ |+-. +.+ |..+.+..++..||+|.++--.
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~ga---~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f 291 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARKGA---YALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTL 291 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCC
T ss_pred CCeEEEcccchhHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcC
Confidence 35799999999999999999876 489999999999987765 3321 222 2222222335459999986432
Q ss_pred ccCCC-----CCCHHHHHHHhhhhccCCcEEEEEcC------hHHHHHHHHHHHhCCCeeEEe
Q 006905 543 SLYKD-----RCETEDILLEMDRILRPEGGVIFRDD------VDELVKVKRIIDALKWQSQIV 594 (626)
Q Consensus 543 ~~~~~-----~c~~~~~l~E~dRiLRPgG~~i~~d~------~~~~~~~~~~~~~l~w~~~~~ 594 (626)
..... ..+...++.++-|+|||||++++... .+....+++.+.....+.++.
T Consensus 292 ~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~~~i~ 354 (393)
T 4dmg_A 292 VKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLGRRLRVH 354 (393)
T ss_dssp CSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCCeEEEE
Confidence 11110 01334688899999999999996532 234556666666666555544
No 478
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.09 E-value=2.6e-06 Score=83.78 Aligned_cols=92 Identities=17% Similarity=0.141 Sum_probs=65.6
Q ss_pred ceeEEeccCchhhHhhhhhCC-Ce----EEEEeccCccCcccHHHHHHhcc-----------cceec-cccccCCCCC--
Q 006905 470 YRNILDMNAHLGGFAAALIDF-PV----WVMNVVPAEAKINTLGVIYERGL-----------VGTYT-NWCEAMSTYP-- 530 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~-~v----~~mnv~~~~~~~~~l~~~~~rgl-----------i~~~~-~~~e~~~~yp-- 530 (626)
-.+|||+|||.|.+++.|++. +. +...|+.+|.++.++..+.++.- +.+.+ |..+ .+|
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~---~~~~~ 161 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK---GYPPN 161 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG---CCGGG
T ss_pred CCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc---CCCcC
Confidence 457999999999999999874 20 00168888998889988876531 22232 2222 344
Q ss_pred CccceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcC
Q 006905 531 RTYDLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDD 573 (626)
Q Consensus 531 ~t~Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~ 573 (626)
.+||+|++...+.+ ++.++.|+|||||.+++.-.
T Consensus 162 ~~fD~I~~~~~~~~---------~~~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 162 APYNAIHVGAAAPD---------TPTELINQLASGGRLIVPVG 195 (227)
T ss_dssp CSEEEEEECSCBSS---------CCHHHHHTEEEEEEEEEEES
T ss_pred CCccEEEECCchHH---------HHHHHHHHhcCCCEEEEEEe
Confidence 78999999776654 34789999999999999753
No 479
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.09 E-value=3.9e-06 Score=90.12 Aligned_cols=122 Identities=16% Similarity=0.105 Sum_probs=80.4
Q ss_pred eeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc----cceeccccccC-CCC---CCccceeee
Q 006905 471 RNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL----VGTYTNWCEAM-STY---PRTYDLIHA 538 (626)
Q Consensus 471 r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl----i~~~~~~~e~~-~~y---p~t~Dlih~ 538 (626)
.+|||+|||+|+|+.++++.+. -.|+.+|.++.+++.+.++ |+ +.+++.=+..+ ..+ ...||+|.+
T Consensus 222 ~~VLDl~cG~G~~sl~la~~g~--~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~ 299 (396)
T 3c0k_A 222 KRVLNCFSYTGGFAVSALMGGC--SQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVM 299 (396)
T ss_dssp CEEEEESCTTCSHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEeeccCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEE
Confidence 5799999999999999998863 3789999998898887664 33 12222111111 111 368999998
Q ss_pred cccccc------CCCCCCHHHHHHHhhhhccCCcEEEEEcCh------HHHHHHHHHHHhCCCeeEEe
Q 006905 539 DSVFSL------YKDRCETEDILLEMDRILRPEGGVIFRDDV------DELVKVKRIIDALKWQSQIV 594 (626)
Q Consensus 539 ~~~f~~------~~~~c~~~~~l~E~dRiLRPgG~~i~~d~~------~~~~~~~~~~~~l~w~~~~~ 594 (626)
+--+.. ......+..++.++-++|+|||.++++... +....+++.+.....+..+.
T Consensus 300 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i 367 (396)
T 3c0k_A 300 DPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFI 367 (396)
T ss_dssp CCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 643211 111135678999999999999999997432 23455555666665554433
No 480
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.08 E-value=9.1e-07 Score=86.71 Aligned_cols=93 Identities=13% Similarity=0.055 Sum_probs=66.0
Q ss_pred ceeEEeccCchhhHhhhhhCCCe----EEEEeccCccCcccHHHHHHh----cc-------cceeccccccCCCC-----
Q 006905 470 YRNILDMNAHLGGFAAALIDFPV----WVMNVVPAEAKINTLGVIYER----GL-------VGTYTNWCEAMSTY----- 529 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v----~~mnv~~~~~~~~~l~~~~~r----gl-------i~~~~~~~e~~~~y----- 529 (626)
-.+|||+|||.|.+++.|++..- -..+|+.+|.++.+++.+.++ |+ +.+.+. .....+
T Consensus 81 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~--d~~~~~~~~~~ 158 (227)
T 2pbf_A 81 GSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHK--NIYQVNEEEKK 158 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEEC--CGGGCCHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEEC--ChHhcccccCc
Confidence 45899999999999999986420 002688899998999888776 31 222221 111122
Q ss_pred -CCccceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcC
Q 006905 530 -PRTYDLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDD 573 (626)
Q Consensus 530 -p~t~Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~ 573 (626)
+.+||+|++...+.+ ++.++.++|||||.+++.-.
T Consensus 159 ~~~~fD~I~~~~~~~~---------~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 159 ELGLFDAIHVGASASE---------LPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHCCEEEEEECSBBSS---------CCHHHHHHEEEEEEEEEEEE
T ss_pred cCCCcCEEEECCchHH---------HHHHHHHhcCCCcEEEEEEc
Confidence 278999999776653 45788999999999999754
No 481
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.07 E-value=9.3e-07 Score=93.37 Aligned_cols=95 Identities=15% Similarity=0.267 Sum_probs=67.4
Q ss_pred ceeEEeccCchhhHhhhhhCC--CeEEEEeccCccCcccHHHHHHhcccceeccccccCCCCCCccceeeeccccccCCC
Q 006905 470 YRNILDMNAHLGGFAAALIDF--PVWVMNVVPAEAKINTLGVIYERGLVGTYTNWCEAMSTYPRTYDLIHADSVFSLYKD 547 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~--~v~~mnv~~~~~~~~~l~~~~~rgli~~~~~~~e~~~~yp~t~Dlih~~~~f~~~~~ 547 (626)
..+|||+|||.|.++.+|+++ ++ .++.+|.+ .+++.+.+..-+.... ...+..+| .||+|.+..+|.++.+
T Consensus 194 ~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~~-~~~~~a~~~~~v~~~~--~d~~~~~~-~~D~v~~~~vlh~~~d 266 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIHEIFPHL---KCTVFDQP-QVVGNLTGNENLNFVG--GDMFKSIP-SADAVLLKWVLHDWND 266 (358)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTS---EEEEEECH-HHHSSCCCCSSEEEEE--CCTTTCCC-CCSEEEEESCGGGSCH
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCC---eEEEeccH-HHHhhcccCCCcEEEe--CccCCCCC-CceEEEEcccccCCCH
Confidence 578999999999999999875 33 45566764 6665544311133322 11223455 5999999999998874
Q ss_pred CCCHHHHHHHhhhhccC---CcEEEEEc
Q 006905 548 RCETEDILLEMDRILRP---EGGVIFRD 572 (626)
Q Consensus 548 ~c~~~~~l~E~dRiLRP---gG~~i~~d 572 (626)
. ....+|.++.|+||| ||+++|.|
T Consensus 267 ~-~~~~~l~~~~~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 267 E-QSLKILKNSKEAISHKGKDGKVIIID 293 (358)
T ss_dssp H-HHHHHHHHHHHHTGGGGGGCEEEEEE
T ss_pred H-HHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 3 234899999999999 99999975
No 482
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.06 E-value=9.8e-06 Score=85.24 Aligned_cols=143 Identities=13% Similarity=0.145 Sum_probs=93.0
Q ss_pred CCceeEEeccCchhhHhhhhhCCCe----EEEEeccCccCcccHHHHHHh----cc-cceeccccccCCCCC-Cccceee
Q 006905 468 GRYRNILDMNAHLGGFAAALIDFPV----WVMNVVPAEAKINTLGVIYER----GL-VGTYTNWCEAMSTYP-RTYDLIH 537 (626)
Q Consensus 468 ~~~r~vlD~g~g~G~faa~l~~~~v----~~mnv~~~~~~~~~l~~~~~r----gl-i~~~~~~~e~~~~yp-~t~Dlih 537 (626)
....+|||.|||+|+|...+++..- -..+|.++|.++.++.++..+ |+ +.+++ +..+...+ ..||+|.
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~--~D~l~~~~~~~fD~Ii 206 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLH--QDGLANLLVDPVDVVI 206 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEE--SCTTSCCCCCCEEEEE
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEE--CCCCCccccCCccEEE
Confidence 4567899999999999988875420 014899999998999888764 44 22222 22344444 8999999
Q ss_pred eccccccCCCC--------------CCHH-HHHHHhhhhccCCcEEEEEcC-----hHHHHHHHHHHHhCCCeeEEeecC
Q 006905 538 ADSVFSLYKDR--------------CETE-DILLEMDRILRPEGGVIFRDD-----VDELVKVKRIIDALKWQSQIVDHE 597 (626)
Q Consensus 538 ~~~~f~~~~~~--------------c~~~-~~l~E~dRiLRPgG~~i~~d~-----~~~~~~~~~~~~~l~w~~~~~~~e 597 (626)
++--|++.... -+.. .++.++-+.|+|||.+++.-+ .+....+++.+..-.|-..++...
T Consensus 207 ~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~~~~~~ii~lp 286 (344)
T 2f8l_A 207 SDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGHIEGIIKLP 286 (344)
T ss_dssp EECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHHEEEEEEEECC
T ss_pred ECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHhCCeEEEeeeCC
Confidence 99887654210 1122 478999999999999988652 233466776655555533333322
Q ss_pred C----CCCCcceEEEEEec
Q 006905 598 D----GPLEREKLLFAVKL 612 (626)
Q Consensus 598 ~----~~~~~e~~l~~~K~ 612 (626)
. +...+.-|+|.+|.
T Consensus 287 ~~~F~~~~~~~~i~vl~k~ 305 (344)
T 2f8l_A 287 ETLFKSEQARKSILILEKA 305 (344)
T ss_dssp GGGSCC-CCCEEEEEEEEC
T ss_pred hhhccCCCCceEEEEEECC
Confidence 1 22245678888874
No 483
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.05 E-value=8.7e-06 Score=86.68 Aligned_cols=94 Identities=12% Similarity=0.076 Sum_probs=64.8
Q ss_pred CCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCC-CeEEEEcccccCC--CCC-------------
Q 006905 212 IRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGV-PALIGVLAAERLP--YPS------------- 273 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~-~~~~~v~d~~~Lp--f~d------------- 273 (626)
+.+|||+|||+|.++..|++. .|+++|+++..+..+.. .+..+++ .+.+..+|+..+. +..
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~-n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~ 292 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQY-NIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLK 292 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHH-HHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGG
T ss_pred CCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHH-HHHHcCCCceEEEECCHHHHHHHHhhccccccccccccc
Confidence 457999999999999999885 68999998866654443 3445565 4667777754431 111
Q ss_pred -CCeeEEEeccccccccccHHHHHHHHHhcccCCeEEEEEe
Q 006905 274 -RAFDMAHCSRCLIPWNQFGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 274 -~sFDlV~~~~~l~h~~~~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
.+||+|++..... .+..++.++|+++|.+++..
T Consensus 293 ~~~fD~Vv~dPPr~-------g~~~~~~~~l~~~g~ivyvs 326 (369)
T 3bt7_A 293 SYQCETIFVDPPRS-------GLDSETEKMVQAYPRILYIS 326 (369)
T ss_dssp GCCEEEEEECCCTT-------CCCHHHHHHHTTSSEEEEEE
T ss_pred cCCCCEEEECcCcc-------ccHHHHHHHHhCCCEEEEEE
Confidence 3799999865321 23456777778888888764
No 484
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.02 E-value=4.9e-06 Score=89.00 Aligned_cols=122 Identities=18% Similarity=0.127 Sum_probs=81.5
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc--cceeccccccCC-CC---CCccceeeec
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL--VGTYTNWCEAMS-TY---PRTYDLIHAD 539 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl--i~~~~~~~e~~~-~y---p~t~Dlih~~ 539 (626)
-.+|||+|||+|+|+.+++.. ..+|+.+|.++.+++.+.+. |+ +.+++.=++.+. .+ +.+||+|.++
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 468999999999999999887 35899999999999887765 33 233332111111 11 4689999985
Q ss_pred cccccCCCC------CCHHHHHHHhhhhccCCcEEEEEcCh------HHHHHHHHHHHhCCCeeEEe
Q 006905 540 SVFSLYKDR------CETEDILLEMDRILRPEGGVIFRDDV------DELVKVKRIIDALKWQSQIV 594 (626)
Q Consensus 540 ~~f~~~~~~------c~~~~~l~E~dRiLRPgG~~i~~d~~------~~~~~~~~~~~~l~w~~~~~ 594 (626)
--....... -....++.++-++|+|||.++++... .....+++.+.....+..+.
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i 353 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRLLRVV 353 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 432111111 12356899999999999999997432 23455666666666655544
No 485
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=97.99 E-value=5.8e-06 Score=88.69 Aligned_cols=118 Identities=13% Similarity=0.050 Sum_probs=78.1
Q ss_pred eeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----ccc----ceecccccc-CCCC---CCccceeee
Q 006905 471 RNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GLV----GTYTNWCEA-MSTY---PRTYDLIHA 538 (626)
Q Consensus 471 r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gli----~~~~~~~e~-~~~y---p~t~Dlih~ 538 (626)
.+|||+|||+|+|+.++++.+. -.|+.+|.++.+++.+.+. |+- .+++.=+.. +... ..+||+|.+
T Consensus 214 ~~VLDl~cGtG~~sl~la~~ga--~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~ 291 (385)
T 2b78_A 214 KTVLNLFSYTAAFSVAAAMGGA--MATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIII 291 (385)
T ss_dssp CEEEEETCTTTHHHHHHHHTTB--SEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEEeeccCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEE
Confidence 5799999999999999998764 2688999999999987764 331 122211111 1111 248999998
Q ss_pred cccccc-----CCC-CCCHHHHHHHhhhhccCCcEEEEEcCh------HHHHHHHHHHHhCCCe
Q 006905 539 DSVFSL-----YKD-RCETEDILLEMDRILRPEGGVIFRDDV------DELVKVKRIIDALKWQ 590 (626)
Q Consensus 539 ~~~f~~-----~~~-~c~~~~~l~E~dRiLRPgG~~i~~d~~------~~~~~~~~~~~~l~w~ 590 (626)
+--... ..+ .-.+..++.++.++|+|||.++++... .....+++.++...++
T Consensus 292 DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 355 (385)
T 2b78_A 292 DPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKHT 355 (385)
T ss_dssp CCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHTTCCCE
T ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCc
Confidence 643321 110 012345788889999999999997432 3456666777777776
No 486
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=97.98 E-value=1.2e-05 Score=85.56 Aligned_cols=112 Identities=13% Similarity=0.059 Sum_probs=71.0
Q ss_pred HHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC---CcEEEeCCccchHHHHHHHHHHcCC-------------Ce
Q 006905 196 AYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR---NIITMSFAPRDTHEAQVQFALERGV-------------PA 259 (626)
Q Consensus 196 ~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~---~V~avdis~~dls~a~i~~A~erg~-------------~~ 259 (626)
.|.+.|.... .....+++|||||||+|.++..++++ .++++|+++ ..++.|++.-. .+
T Consensus 174 ~YhE~l~~~~-~~~p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~-----~vie~Ar~~~~~l~~~~l~dp~~~rv 247 (364)
T 2qfm_A 174 AYTRAIMGSG-KEDYTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQ-----MVIDGCKKYMRKTCGDVLDNLKGDCY 247 (364)
T ss_dssp HHHHHHTTTT-CCCCTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCH-----HHHHHHHHHCCC----CCSSSEETTE
T ss_pred HHHHHHhhhh-hhCCCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCH-----HHHHHHHHHHHHhccccccccCCCcE
Confidence 4554443322 22235679999999999999998876 477788766 34445544311 35
Q ss_pred EEEEcccccCCC----CCCCeeEEEeccccccccc-----cHHHHHHHH----HhcccCCeEEEEEe
Q 006905 260 LIGVLAAERLPY----PSRAFDMAHCSRCLIPWNQ-----FGGIYLIEV----DRVLRPGGYWILSG 313 (626)
Q Consensus 260 ~~~v~d~~~Lpf----~d~sFDlV~~~~~l~h~~~-----~~~~~L~Ei----~RvLKPGG~lvis~ 313 (626)
.+...|+....- .+++||+|++...-.+... ....+++++ .++|+|||.+++..
T Consensus 248 ~vi~~Da~~~L~~~~~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 248 QVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp EEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEECcHHHHHHhhhccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 666677544221 3578999998543212111 114566666 89999999999974
No 487
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.95 E-value=1.6e-05 Score=85.30 Aligned_cols=102 Identities=16% Similarity=0.150 Sum_probs=67.4
Q ss_pred CCEEEEeCCCCchHHHHHhhC---------------------CcEEEeCCccchHHHHHHHH-------HHcC--CCeEE
Q 006905 212 IRTAIDTGCGVASWGAYLLSR---------------------NIITMSFAPRDTHEAQVQFA-------LERG--VPALI 261 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~---------------------~V~avdis~~dls~a~i~~A-------~erg--~~~~~ 261 (626)
.-+|+|+||++|..+..+... .|...|+...|.+.-...+. .+.| .+..+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 468999999999777665443 24556776666644333222 2222 22344
Q ss_pred EEcc---cccCCCCCCCeeEEEeccccccccccHH---------------------------------------HHHHHH
Q 006905 262 GVLA---AERLPYPSRAFDMAHCSRCLIPWNQFGG---------------------------------------IYLIEV 299 (626)
Q Consensus 262 ~v~d---~~~Lpf~d~sFDlV~~~~~l~h~~~~~~---------------------------------------~~L~Ei 299 (626)
..+. ...-.||+++||+|+++.+| ||..+.. .+|+-.
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~aL-HWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~R 211 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYCL-HWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIH 211 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESCT-TBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEeccee-eecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333 33456899999999999999 8854331 125666
Q ss_pred HhcccCCeEEEEEeC
Q 006905 300 DRVLRPGGYWILSGP 314 (626)
Q Consensus 300 ~RvLKPGG~lvis~p 314 (626)
.|.|+|||.++++..
T Consensus 212 a~eL~pGG~mvl~~~ 226 (384)
T 2efj_A 212 SEELISRGRMLLTFI 226 (384)
T ss_dssp HHHEEEEEEEEEEEE
T ss_pred HHHhccCCeEEEEEe
Confidence 899999999999864
No 488
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=97.94 E-value=3.6e-05 Score=82.57 Aligned_cols=101 Identities=15% Similarity=0.020 Sum_probs=71.3
Q ss_pred CCEEEEeCCCCchHHHHHhhC------------------------------------------CcEEEeCCccchHHHHH
Q 006905 212 IRTAIDTGCGVASWGAYLLSR------------------------------------------NIITMSFAPRDTHEAQV 249 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~------------------------------------------~V~avdis~~dls~a~i 249 (626)
+.++||++||+|.++..++.. .|+++|+++.++..+..
T Consensus 196 ~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~ 275 (385)
T 3ldu_A 196 GRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIARE 275 (385)
T ss_dssp TSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHHH
Confidence 458999999999888776543 48999998866655444
Q ss_pred HHHHHcCC--CeEEEEcccccCCCCCCCeeEEEeccccccccc---cHHHHHHHHHhcccC--CeEEEEEeC
Q 006905 250 QFALERGV--PALIGVLAAERLPYPSRAFDMAHCSRCLIPWNQ---FGGIYLIEVDRVLRP--GGYWILSGP 314 (626)
Q Consensus 250 ~~A~erg~--~~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h~~~---~~~~~L~Ei~RvLKP--GG~lvis~p 314 (626)
+ +...|+ .+.+.+.|...++.+ .+||+|+++..+..-.. +...++.++.++||+ ||.+++..+
T Consensus 276 N-a~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 345 (385)
T 3ldu_A 276 N-AEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITS 345 (385)
T ss_dssp H-HHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEES
T ss_pred H-HHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEEC
Confidence 3 334465 477888888888764 58999999886532221 224567777777776 888777654
No 489
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=97.93 E-value=4.5e-05 Score=82.14 Aligned_cols=101 Identities=15% Similarity=0.016 Sum_probs=69.9
Q ss_pred CCEEEEeCCCCchHHHHHhhC------------------------------------------CcEEEeCCccchHHHHH
Q 006905 212 IRTAIDTGCGVASWGAYLLSR------------------------------------------NIITMSFAPRDTHEAQV 249 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~------------------------------------------~V~avdis~~dls~a~i 249 (626)
+..+||.+||+|.++..++.. .++++|+++.++..+..
T Consensus 202 ~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~ 281 (393)
T 3k0b_A 202 DRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQ 281 (393)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHHH
Confidence 458999999999988766542 28999998866655444
Q ss_pred HHHHHcCCC--eEEEEcccccCCCCCCCeeEEEeccccccccc---cHHHHHHHHHhcccC--CeEEEEEeC
Q 006905 250 QFALERGVP--ALIGVLAAERLPYPSRAFDMAHCSRCLIPWNQ---FGGIYLIEVDRVLRP--GGYWILSGP 314 (626)
Q Consensus 250 ~~A~erg~~--~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h~~~---~~~~~L~Ei~RvLKP--GG~lvis~p 314 (626)
.+...|+. +.+.+.|+..++.+ .+||+|+++..+..... ....+..++.++||+ ||.+++...
T Consensus 282 -Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 351 (393)
T 3k0b_A 282 -NAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTS 351 (393)
T ss_dssp -HHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred -HHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 34445653 77888898888765 48999999975422221 124456666667766 888877654
No 490
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=97.92 E-value=3.4e-05 Score=79.02 Aligned_cols=85 Identities=13% Similarity=0.100 Sum_probs=62.6
Q ss_pred HHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCC
Q 006905 195 DAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYP 272 (626)
Q Consensus 195 ~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~ 272 (626)
...++.|.+.+.... + +|||||||+|.++..|+++ .|+++|+++.++.....+.. +..+.+..+|+..++++
T Consensus 33 ~~i~~~Iv~~~~~~~--~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~---~~~v~vi~~D~l~~~~~ 106 (271)
T 3fut_A 33 EAHLRRIVEAARPFT--G-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLS---GLPVRLVFQDALLYPWE 106 (271)
T ss_dssp HHHHHHHHHHHCCCC--S-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTT---TSSEEEEESCGGGSCGG
T ss_pred HHHHHHHHHhcCCCC--C-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC---CCCEEEEECChhhCChh
Confidence 345666777765443 4 7999999999999999987 78999998866554333222 23577888898888876
Q ss_pred CC-CeeEEEecccc
Q 006905 273 SR-AFDMAHCSRCL 285 (626)
Q Consensus 273 d~-sFDlV~~~~~l 285 (626)
+. .||.|+++...
T Consensus 107 ~~~~~~~iv~NlPy 120 (271)
T 3fut_A 107 EVPQGSLLVANLPY 120 (271)
T ss_dssp GSCTTEEEEEEECS
T ss_pred hccCccEEEecCcc
Confidence 43 69999998854
No 491
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=97.92 E-value=2.2e-05 Score=85.78 Aligned_cols=118 Identities=12% Similarity=0.246 Sum_probs=77.0
Q ss_pred ceeEEeccCchhhHhhhhhCC--C-eEEEEeccCccCcccHHHHHHh----cc--cceec-cccccCCCCC-Cccceeee
Q 006905 470 YRNILDMNAHLGGFAAALIDF--P-VWVMNVVPAEAKINTLGVIYER----GL--VGTYT-NWCEAMSTYP-RTYDLIHA 538 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~--~-v~~mnv~~~~~~~~~l~~~~~r----gl--i~~~~-~~~e~~~~yp-~t~Dlih~ 538 (626)
-..|||+|||.|+++..|++. + . .|+.+|.++.++..+.++ |+ +.+.+ |..+.-..++ .+||+|.+
T Consensus 260 g~~VLDlgaG~G~~t~~la~~~~~~~---~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~ 336 (450)
T 2yxl_A 260 GETVVDLAAAPGGKTTHLAELMKNKG---KIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLL 336 (450)
T ss_dssp TCEEEESSCTTCHHHHHHHHHTTTCS---EEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEE
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCCC---EEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEE
Confidence 357999999999999999863 2 2 588999998899888776 55 33333 2221111255 78999996
Q ss_pred cc------ccccCCC------CCCH-------HHHHHHhhhhccCCcEEEEEc----ChHHHHHHHHHHHhC-CCe
Q 006905 539 DS------VFSLYKD------RCET-------EDILLEMDRILRPEGGVIFRD----DVDELVKVKRIIDAL-KWQ 590 (626)
Q Consensus 539 ~~------~f~~~~~------~c~~-------~~~l~E~dRiLRPgG~~i~~d----~~~~~~~~~~~~~~l-~w~ 590 (626)
+- ++....+ .-++ ..+|.++.++|||||.+++++ ..+....++.+++.. .|+
T Consensus 337 D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~~~~~~ 412 (450)
T 2yxl_A 337 DAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVHPEFK 412 (450)
T ss_dssp ECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCSSCE
T ss_pred cCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHHHhCCCCE
Confidence 42 2221110 1122 468999999999999999864 223345566666654 344
No 492
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=97.92 E-value=2.2e-05 Score=84.10 Aligned_cols=131 Identities=13% Similarity=0.168 Sum_probs=84.5
Q ss_pred eeEEeccCchhhHhhhhhCC---CeEEEEeccCccCcccHHHHHHhcccceeccccccCCCCC--CccceeeeccccccC
Q 006905 471 RNILDMNAHLGGFAAALIDF---PVWVMNVVPAEAKINTLGVIYERGLVGTYTNWCEAMSTYP--RTYDLIHADSVFSLY 545 (626)
Q Consensus 471 r~vlD~g~g~G~faa~l~~~---~v~~mnv~~~~~~~~~l~~~~~rgli~~~~~~~e~~~~yp--~t~Dlih~~~~f~~~ 545 (626)
.+|||+|||+|+|+.+++++ .. +|.++|.++.+++.+ . . +.+++ .++..++ ..||+|.++--|...
T Consensus 41 ~~vLD~gcGtG~~~~~~~~~~~~~~---~i~gvDi~~~~~~~a-~-~-~~~~~---~D~~~~~~~~~fD~Ii~NPPy~~~ 111 (421)
T 2ih2_A 41 GRVLEPACAHGPFLRAFREAHGTAY---RFVGVEIDPKALDLP-P-W-AEGIL---ADFLLWEPGEAFDLILGNPPYGIV 111 (421)
T ss_dssp CEEEEETCTTCHHHHHHHHHHCSCS---EEEEEESCTTTCCCC-T-T-EEEEE---SCGGGCCCSSCEEEEEECCCCCCB
T ss_pred CEEEECCCCChHHHHHHHHHhCCCC---eEEEEECCHHHHHhC-C-C-CcEEe---CChhhcCccCCCCEEEECcCccCc
Confidence 38999999999999999864 23 788888888887766 1 1 23333 3333443 789999997544432
Q ss_pred CCC-------------------------CC-HHHHHHHhhhhccCCcEEEEEcChH-----HHHHHHHHHHhCCCeeEEe
Q 006905 546 KDR-------------------------CE-TEDILLEMDRILRPEGGVIFRDDVD-----ELVKVKRIIDALKWQSQIV 594 (626)
Q Consensus 546 ~~~-------------------------c~-~~~~l~E~dRiLRPgG~~i~~d~~~-----~~~~~~~~~~~l~w~~~~~ 594 (626)
... -+ ...+|..+.++|+|||.+++--+.. ...++++.+....+ ..+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~~~~~-~~i~ 190 (421)
T 2ih2_A 112 GEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGK-TSVY 190 (421)
T ss_dssp SCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHHHHHSE-EEEE
T ss_pred ccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHHHhcCC-eEEE
Confidence 220 11 1256788999999999988864432 45677887666666 3333
Q ss_pred ecC---CCCCCcceEEEEEe
Q 006905 595 DHE---DGPLEREKLLFAVK 611 (626)
Q Consensus 595 ~~e---~~~~~~e~~l~~~K 611 (626)
+.. .+...+--|++.+|
T Consensus 191 ~l~~~F~~~~~~~~il~~~k 210 (421)
T 2ih2_A 191 YLGEVFPQKKVSAVVIRFQK 210 (421)
T ss_dssp EEESCSTTCCCCEEEEEEES
T ss_pred ECCCCCCCCCccEEEEEEEe
Confidence 321 22223456677777
No 493
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=97.91 E-value=1.3e-05 Score=88.65 Aligned_cols=116 Identities=15% Similarity=0.209 Sum_probs=74.5
Q ss_pred ceeEEeccCchhhHhhhhhCC---CeEEEEeccCccCcccHHHHHHh----cc--cceeccccccCCC-CCCccceeeec
Q 006905 470 YRNILDMNAHLGGFAAALIDF---PVWVMNVVPAEAKINTLGVIYER----GL--VGTYTNWCEAMST-YPRTYDLIHAD 539 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~---~v~~mnv~~~~~~~~~l~~~~~r----gl--i~~~~~~~e~~~~-yp~t~Dlih~~ 539 (626)
-..|||||||.|+.+..|++. .- .|+.+|.++.++..+.++ |+ +.+.+.=...+.. .+.+||.|.++
T Consensus 118 g~~VLDl~aGpG~kt~~lA~~~~~~g---~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D 194 (479)
T 2frx_A 118 PQRVMDVAAAPGSKTTQISARMNNEG---AILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLD 194 (479)
T ss_dssp CSEEEESSCTTSHHHHHHHHHTTTCS---EEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEE
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEEC
Confidence 357999999999999998864 12 488999999999888765 44 2333321122222 35799999974
Q ss_pred ------cccccCCCC---CC----------HHHHHHHhhhhccCCcEEEEEc----ChHHHHHHHHHHHhCC
Q 006905 540 ------SVFSLYKDR---CE----------TEDILLEMDRILRPEGGVIFRD----DVDELVKVKRIIDALK 588 (626)
Q Consensus 540 ------~~f~~~~~~---c~----------~~~~l~E~dRiLRPgG~~i~~d----~~~~~~~~~~~~~~l~ 588 (626)
++|....+. -. ...+|.++-|+|||||.++++. ..+.-..|+.+++...
T Consensus 195 ~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~Ene~vv~~~l~~~~ 266 (479)
T 2frx_A 195 APCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETYP 266 (479)
T ss_dssp CCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTTHHHHHHHHHHST
T ss_pred CCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccCHHHHHHHHHHCC
Confidence 333321110 00 1368999999999999999963 1222334455555443
No 494
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=97.90 E-value=1.2e-05 Score=86.37 Aligned_cols=124 Identities=11% Similarity=0.056 Sum_probs=81.0
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc---cceec-cccccCCCC---CCccceeee
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL---VGTYT-NWCEAMSTY---PRTYDLIHA 538 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl---i~~~~-~~~e~~~~y---p~t~Dlih~ 538 (626)
-.+|||+|||+|+|+..+++.+. -+|+.+|.++.++..+.++ |+ +..++ |..+.+..+ ..+||+|.+
T Consensus 218 ~~~VLDl~~G~G~~~~~la~~g~--~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 218 GDRVLDVFTYTGGFAIHAAIAGA--DEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp TCEEEETTCTTTHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 35899999999999999998853 3689999998888877654 32 22232 211111111 368999998
Q ss_pred ccccccCCCC------CCHHHHHHHhhhhccCCcEEEEEcCh------HHHHHHHHHHHhCCCeeEEee
Q 006905 539 DSVFSLYKDR------CETEDILLEMDRILRPEGGVIFRDDV------DELVKVKRIIDALKWQSQIVD 595 (626)
Q Consensus 539 ~~~f~~~~~~------c~~~~~l~E~dRiLRPgG~~i~~d~~------~~~~~~~~~~~~l~w~~~~~~ 595 (626)
+--....... .+...++.++-++|+|||.+++.... +....+.+.+.....+.++..
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~ 364 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQMFKDMIIAAGAKAGKFLKMLE 364 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTEEEEESS
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEe
Confidence 5432111100 23457899999999999999887432 234455566666666666554
No 495
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.88 E-value=2.3e-05 Score=87.80 Aligned_cols=116 Identities=14% Similarity=0.084 Sum_probs=77.0
Q ss_pred HHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhh----------------------CCcEEEeCCccchHHHHHHHHH
Q 006905 196 AYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLS----------------------RNIITMSFAPRDTHEAQVQFAL 253 (626)
Q Consensus 196 ~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~----------------------~~V~avdis~~dls~a~i~~A~ 253 (626)
..++.+.+++... .+.+|||.+||+|.|...+++ ..+.++|+++....-+..+..
T Consensus 156 ~iv~~mv~~l~p~--~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~- 232 (541)
T 2ar0_A 156 PLIKTIIHLLKPQ--PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCL- 232 (541)
T ss_dssp HHHHHHHHHHCCC--TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHH-
T ss_pred HHHHHHHHHhccC--CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHH-
Confidence 3455566666433 345899999999998876653 258899997755444333332
Q ss_pred HcCCC------eEEEEcccccCC-CCCCCeeEEEeccccccccc-------------cHHHHHHHHHhcccCCeEEEEEe
Q 006905 254 ERGVP------ALIGVLAAERLP-YPSRAFDMAHCSRCLIPWNQ-------------FGGIYLIEVDRVLRPGGYWILSG 313 (626)
Q Consensus 254 erg~~------~~~~v~d~~~Lp-f~d~sFDlV~~~~~l~h~~~-------------~~~~~L~Ei~RvLKPGG~lvis~ 313 (626)
.+++. ..+..+|+...+ .....||+|+++..+..... ....++..+.+.|||||++++..
T Consensus 233 l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~ 312 (541)
T 2ar0_A 233 LHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVV 312 (541)
T ss_dssp TTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEe
Confidence 23443 456666654432 34568999999876633211 12478999999999999999986
Q ss_pred C
Q 006905 314 P 314 (626)
Q Consensus 314 p 314 (626)
|
T Consensus 313 p 313 (541)
T 2ar0_A 313 P 313 (541)
T ss_dssp E
T ss_pred c
Confidence 5
No 496
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=97.88 E-value=9e-05 Score=79.54 Aligned_cols=101 Identities=13% Similarity=0.046 Sum_probs=71.4
Q ss_pred CCEEEEeCCCCchHHHHHhhC------------------------------------------CcEEEeCCccchHHHHH
Q 006905 212 IRTAIDTGCGVASWGAYLLSR------------------------------------------NIITMSFAPRDTHEAQV 249 (626)
Q Consensus 212 ~~~VLDIGCGtG~~a~~La~~------------------------------------------~V~avdis~~dls~a~i 249 (626)
+..+||.+||+|.++..++.. .++++|+++.++..+..
T Consensus 195 ~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~ 274 (384)
T 3ldg_A 195 DKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIARK 274 (384)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHHH
Confidence 458999999999988766542 28999998866654443
Q ss_pred HHHHHcCCC--eEEEEcccccCCCCCCCeeEEEeccccccccc---cHHHHHHHHHhcccC--CeEEEEEeC
Q 006905 250 QFALERGVP--ALIGVLAAERLPYPSRAFDMAHCSRCLIPWNQ---FGGIYLIEVDRVLRP--GGYWILSGP 314 (626)
Q Consensus 250 ~~A~erg~~--~~~~v~d~~~Lpf~d~sFDlV~~~~~l~h~~~---~~~~~L~Ei~RvLKP--GG~lvis~p 314 (626)
.+...|+. +.+...|+..++.++ +||+|+++..+..-.. +...++.++.+.||+ ||.+++..+
T Consensus 275 -Na~~~gl~~~I~~~~~D~~~l~~~~-~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 344 (384)
T 3ldg_A 275 -NAREVGLEDVVKLKQMRLQDFKTNK-INGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTN 344 (384)
T ss_dssp -HHHHTTCTTTEEEEECCGGGCCCCC-CSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEES
T ss_pred -HHHHcCCCCceEEEECChHHCCccC-CcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEEC
Confidence 34455653 778888988887654 8999999875422221 225667777777776 888888754
No 497
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.86 E-value=4.1e-05 Score=77.63 Aligned_cols=85 Identities=15% Similarity=0.146 Sum_probs=58.8
Q ss_pred HHHHHHHHHhhccCCCCCCEEEEeCCCCchHHHHHhhC--CcEEEeCCccchHHHHHHHHHHcCCCeEEEEcccccCCCC
Q 006905 195 DAYIDDIGKLINLNDGSIRTAIDTGCGVASWGAYLLSR--NIITMSFAPRDTHEAQVQFALERGVPALIGVLAAERLPYP 272 (626)
Q Consensus 195 ~~yi~~L~~ll~l~~~~~~~VLDIGCGtG~~a~~La~~--~V~avdis~~dls~a~i~~A~erg~~~~~~v~d~~~Lpf~ 272 (626)
...++.|.+.+.... +.+|||||||+|.++..|+++ .++++|+++.++..+..+.. ....+.+..+|+..++++
T Consensus 15 ~~i~~~iv~~~~~~~--~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~--~~~~v~~i~~D~~~~~~~ 90 (255)
T 3tqs_A 15 SFVLQKIVSAIHPQK--TDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYN--QQKNITIYQNDALQFDFS 90 (255)
T ss_dssp HHHHHHHHHHHCCCT--TCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHT--TCTTEEEEESCTTTCCGG
T ss_pred HHHHHHHHHhcCCCC--cCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHh--hCCCcEEEEcchHhCCHH
Confidence 345566777765544 458999999999999999987 68888887754443322221 134577888898888765
Q ss_pred C----CCeeEEEeccc
Q 006905 273 S----RAFDMAHCSRC 284 (626)
Q Consensus 273 d----~sFDlV~~~~~ 284 (626)
+ +.|| |+++..
T Consensus 91 ~~~~~~~~~-vv~NlP 105 (255)
T 3tqs_A 91 SVKTDKPLR-VVGNLP 105 (255)
T ss_dssp GSCCSSCEE-EEEECC
T ss_pred HhccCCCeE-EEecCC
Confidence 3 5688 667663
No 498
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=97.84 E-value=2.5e-05 Score=84.76 Aligned_cols=114 Identities=18% Similarity=0.282 Sum_probs=75.1
Q ss_pred ceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----cc-cceeccccccCCC----CC-Cccceeeec
Q 006905 470 YRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GL-VGTYTNWCEAMST----YP-RTYDLIHAD 539 (626)
Q Consensus 470 ~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gl-i~~~~~~~e~~~~----yp-~t~Dlih~~ 539 (626)
-.+|||+|||.|+++..|++..-- ..|+.+|.++.++..+.++ |+ +.+++ ..+.. ++ .+||+|.++
T Consensus 247 g~~VLDlgaG~G~~t~~la~~~~~-~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~---~D~~~~~~~~~~~~fD~Vl~D 322 (429)
T 1sqg_A 247 GEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQ---GDGRYPSQWCGEQQFDRILLD 322 (429)
T ss_dssp TCEEEEESCTTCHHHHHHHHHCTT-CEEEEEESSTTTHHHHHHHHHHTTCCCEEEE---CCTTCTHHHHTTCCEEEEEEE
T ss_pred cCeEEEECCCchHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHHcCCCeEEEe---CchhhchhhcccCCCCEEEEe
Confidence 457999999999999999875200 3689999998999988776 44 22222 33333 34 789999864
Q ss_pred cccc---cCCCCCC---------H-------HHHHHHhhhhccCCcEEEEEc----ChHHHHHHHHHHHhC
Q 006905 540 SVFS---LYKDRCE---------T-------EDILLEMDRILRPEGGVIFRD----DVDELVKVKRIIDAL 587 (626)
Q Consensus 540 ~~f~---~~~~~c~---------~-------~~~l~E~dRiLRPgG~~i~~d----~~~~~~~~~~~~~~l 587 (626)
--.+ .....-+ + ..+|.++-++|||||+++++. ..+....++.+++..
T Consensus 323 ~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~v~~~l~~~ 393 (429)
T 1sqg_A 323 APCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRT 393 (429)
T ss_dssp CCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHHHHHHHHHC
T ss_pred CCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHHHHHHHHhC
Confidence 3222 1111112 1 368999999999999999975 233345566665543
No 499
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=97.82 E-value=4.5e-05 Score=78.43 Aligned_cols=137 Identities=13% Similarity=0.185 Sum_probs=91.0
Q ss_pred hhchhhhHHHHHHHHHHHHhhhhcCCCCCceeEEeccCchhhHhhhhhCCCeEEEEeccCccCcccHHHHHHh----ccc
Q 006905 441 EIFQQNSELWKKRLSYYKTMNNQLGQSGRYRNILDMNAHLGGFAAALIDFPVWVMNVVPAEAKINTLGVIYER----GLV 516 (626)
Q Consensus 441 ~~f~~d~~~w~~~v~~y~~~~~~~~~~~~~r~vlD~g~g~G~faa~l~~~~v~~mnv~~~~~~~~~l~~~~~r----gli 516 (626)
-.|..++...+.++.. .+.+ -.+||||+||+|+||-.+++.+. ..|+.+|.++..++.+.+. |+-
T Consensus 106 ~~f~~~~~~er~ri~~------~~~~---g~~VlD~~aG~G~~~i~~a~~g~--~~V~avD~np~a~~~~~~N~~~N~v~ 174 (278)
T 3k6r_A 106 IMFSPANVKERVRMAK------VAKP---DELVVDMFAGIGHLSLPIAVYGK--AKVIAIEKDPYTFKFLVENIHLNKVE 174 (278)
T ss_dssp SCCCGGGHHHHHHHHH------HCCT---TCEEEETTCTTTTTTHHHHHHTC--CEEEEECCCHHHHHHHHHHHHHTTCT
T ss_pred eEEcCCcHHHHHHHHH------hcCC---CCEEEEecCcCcHHHHHHHHhcC--CeEEEEECCHHHHHHHHHHHHHcCCC
Confidence 3466666666666542 2344 35799999999999998887763 2678889888877766553 332
Q ss_pred ceeccccccCCCCC--CccceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcC-------hHHHHHHHHHHHhC
Q 006905 517 GTYTNWCEAMSTYP--RTYDLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDD-------VDELVKVKRIIDAL 587 (626)
Q Consensus 517 ~~~~~~~e~~~~yp--~t~Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~-------~~~~~~~~~~~~~l 587 (626)
+.+.-.+.+...++ ..||.|..+...+. ...|.+.-++|||||++.+-+. .+..+.++++++..
T Consensus 175 ~~v~~~~~D~~~~~~~~~~D~Vi~~~p~~~-------~~~l~~a~~~lk~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~ 247 (278)
T 3k6r_A 175 DRMSAYNMDNRDFPGENIADRILMGYVVRT-------HEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEY 247 (278)
T ss_dssp TTEEEECSCTTTCCCCSCEEEEEECCCSSG-------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHT
T ss_pred CcEEEEeCcHHHhccccCCCEEEECCCCcH-------HHHHHHHHHHcCCCCEEEEEeeecccccchhHHHHHHHHHHHc
Confidence 21222223344454 78998877533321 3456677799999999877421 23577888999999
Q ss_pred CCeeEEee
Q 006905 588 KWQSQIVD 595 (626)
Q Consensus 588 ~w~~~~~~ 595 (626)
.+++.+..
T Consensus 248 g~~v~~~~ 255 (278)
T 3k6r_A 248 GYDVEKLN 255 (278)
T ss_dssp TCEEEEEE
T ss_pred CCcEEEEE
Confidence 99887543
No 500
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=97.82 E-value=4.8e-05 Score=77.38 Aligned_cols=143 Identities=11% Similarity=0.103 Sum_probs=95.3
Q ss_pred HHHhhhhcCCCCCceeEEeccCchhhHhhhhhCC-CeEEEEeccCccCcccHHHHHHhcc-cceec--cccccCCC-CCC
Q 006905 457 YKTMNNQLGQSGRYRNILDMNAHLGGFAAALIDF-PVWVMNVVPAEAKINTLGVIYERGL-VGTYT--NWCEAMST-YPR 531 (626)
Q Consensus 457 y~~~~~~~~~~~~~r~vlD~g~g~G~faa~l~~~-~v~~mnv~~~~~~~~~l~~~~~rgl-i~~~~--~~~e~~~~-yp~ 531 (626)
|..++..+.. ..+|||+|||+|-||..+... +- -.|..+|.++.+++++.++.- .|.-+ .++.-... .|.
T Consensus 123 Y~~i~~~i~~---p~~VLDLGCG~GpLAl~~~~~~p~--a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~ 197 (281)
T 3lcv_B 123 YRELFRHLPR---PNTLRDLACGLNPLAAPWMGLPAE--TVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDE 197 (281)
T ss_dssp HHHHGGGSCC---CSEEEETTCTTGGGCCTTTTCCTT--CEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCS
T ss_pred HHHHHhccCC---CceeeeeccCccHHHHHHHhhCCC--CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCC
Confidence 6666665643 779999999999999999765 22 267888999899998887732 12111 22233333 349
Q ss_pred ccceeeeccccccCCCCCCHHHHHHHhhhhccCCcEEEEEcC---------h--HHHHHHHHHHHhCCCeeEEeecCCCC
Q 006905 532 TYDLIHADSVFSLYKDRCETEDILLEMDRILRPEGGVIFRDD---------V--DELVKVKRIIDALKWQSQIVDHEDGP 600 (626)
Q Consensus 532 t~Dlih~~~~f~~~~~~c~~~~~l~E~dRiLRPgG~~i~~d~---------~--~~~~~~~~~~~~l~w~~~~~~~e~~~ 600 (626)
.||++-+.-+..++.+. . ...+.++-..|+|+|.||--++ | ......+..+..-.|........
T Consensus 198 ~~DvaL~lkti~~Le~q-~-kg~g~~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~~~~~~~--- 272 (281)
T 3lcv_B 198 PADVTLLLKTLPCLETQ-Q-RGSGWEVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCRIQRLEIG--- 272 (281)
T ss_dssp CCSEEEETTCHHHHHHH-S-TTHHHHHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHHHHHTCCEEEEEET---
T ss_pred CcchHHHHHHHHHhhhh-h-hHHHHHHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCceeeeeec---
Confidence 99999997777776532 1 1234489999999999999877 2 24667777777777765543322
Q ss_pred CCcceEEEEEe
Q 006905 601 LEREKLLFAVK 611 (626)
Q Consensus 601 ~~~e~~l~~~K 611 (626)
.|-+.|.+|
T Consensus 273 --nEl~y~i~k 281 (281)
T 3lcv_B 273 --NELIYVIQK 281 (281)
T ss_dssp --TEEEEEEC-
T ss_pred --CeeEEEecC
Confidence 354555443
Done!